BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 042039
         (376 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 212/376 (56%), Positives = 268/376 (71%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M NGNG  GV  KPN V Y TIID LCK+G +DK K LFL+MKG  I+PDVV Y+S+IHG
Sbjct: 223 MLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHG 282

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           +CH   W  AK LF EM+D+GV P+VVTFNV++D LCK GKM+EA+ LL LM+QR   P+
Sbjct: 283 MCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPD 342

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
            FTY+TL+DGFCL G+I+ A +LF SMES G + D VSYN+LINGYCK+  + EA  LYR
Sbjct: 343 TFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYR 402

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           EM+ K I PTV+TYNTL  GLF   +V  A  LF EM+  D+  ++ TYN  +DGLCKN 
Sbjct: 403 EMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNN 462

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
           ++ EA+ELF  L     +  IQ +NCLIDGLCK+ ++EIA ELF  L    L  +V+TY 
Sbjct: 463 HLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYT 522

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +MIHGLC  GQ++ A DLFL MEE   APN++ F TL+ GF + ++  KV+ELL +M EK
Sbjct: 523 VMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEK 582

Query: 361 KVMPDASIVSMVVDLL 376
              PDAS +S+VVDLL
Sbjct: 583 DFSPDASTISIVVDLL 598



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 202/369 (54%), Gaps = 6/369 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +T N +I+  C    VD   A+  +M     +P+ VT+ SL+ GLC  +  +EA  L
Sbjct: 125 PDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGL 184

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD------VRPNAFTYSTL 127
             +M+  G +P+VVT+  +++ LC  G    A +L + M+  +      ++PN   Y T+
Sbjct: 185 LRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTI 244

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D  C  G I++ +ELF  M+  G   D V+Y+ +I+G C     E A  L+ EMV +G+
Sbjct: 245 IDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGV 304

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P VVT+N L   L +  ++E A  L + M +   + DT TYNT IDG C  G I +A +
Sbjct: 305 HPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARD 364

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           LF ++     E D  +YN LI+G CKSGR+  A +L+R +  + ++  V+TYN ++ GL 
Sbjct: 365 LFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLF 424

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            +G++  A +LF +M+ + + P    +  L+ G  + N  S+ +EL H ++     P   
Sbjct: 425 REGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQ 484

Query: 368 IVSMVVDLL 376
           I + ++D L
Sbjct: 485 IFNCLIDGL 493



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/275 (34%), Positives = 155/275 (56%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T TYNT+IDG C EG +D A+ LF+ M+ + I  D V+YN LI+G C +    EAK+L
Sbjct: 341 PDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKL 400

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + EMM + + P+V+T+N ++  L + GK+ +A  L   M   D+ P + TY+ L+DG C 
Sbjct: 401 YREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCK 460

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              ++ A ELF  +E+   +     +N LI+G CK +++E A  L+  +  +G++P V+T
Sbjct: 461 NNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVIT 520

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  +  GL +  Q+E+A  LF  M+    A +  T+NT + G C+N  + + VEL + + 
Sbjct: 521 YTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMA 580

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
                 D    + ++D L K  +    L L  + P
Sbjct: 581 EKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFP 615



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 185/393 (47%), Gaps = 43/393 (10%)

Query: 27  CKEGFVDKAKA--LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQP 84
           CK G + +++A  +F  +      P + ++N+L+  +     + +   L+  M   G+ P
Sbjct: 66  CKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAP 125

Query: 85  SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELF 144
             +T N++++  C   K+D    +L  M++R   PN  T+++L+ G CL  +I+ A  L 
Sbjct: 126 DFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLL 185

Query: 145 GSMESMGCKHDDVSYNILING--------------------------------------- 165
             M  MG + + V+Y  L+NG                                       
Sbjct: 186 RKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTII 245

Query: 166 --YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVA 223
              CK+  +++   L+ EM  +GI P VV Y+++  G+    + E A  LF EM  + V 
Sbjct: 246 DSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVH 305

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL 283
            +  T+N  ID LCK G + EA  L + +       D   YN LIDG C  GR++ A +L
Sbjct: 306 PNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDL 365

Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           F S+  + +  D V+YN++I+G C  G+M +A  L+ +M    + P VI + TL+ G  R
Sbjct: 366 FVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFR 425

Query: 344 INKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             K      L  +MK   + P++   ++++D L
Sbjct: 426 EGKVRDAWNLFGEMKVHDLTPESCTYNILLDGL 458



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 95/173 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P + TYN ++DGLCK   + +A  LF  ++  +  P +  +N LI GLC A     A+ L
Sbjct: 446 PESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIAREL 505

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  +  +G++P+V+T+ V++  LCK+G+++ A  L   M ++   PN  T++TLM GFC 
Sbjct: 506 FNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQ 565

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
             ++ +  EL   M       D  + +I+++   K+++  E L L     ++G
Sbjct: 566 NDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 57/97 (58%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +TY  +I GLCK G ++ AK LFL M+ +   P++VT+N+L+ G C  ++  +   
Sbjct: 515 EPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVE 574

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
           L  EM ++   P   T ++++D L K+ K  E   LL
Sbjct: 575 LLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLL 611



 Score = 38.9 bits (89), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 33/70 (47%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VT+NT++ G C+   + K   L  +M  ++ +PD  T + ++  L     + E  
Sbjct: 549 CAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYL 608

Query: 72  RLFFEMMDQG 81
            L      QG
Sbjct: 609 HLLPTFPAQG 618


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/376 (52%), Positives = 264/376 (70%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M N   + GV CKP  +TY+ IIDGLCK G  D+AK LF +MK + + PDV++Y++LIHG
Sbjct: 222 MLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHG 281

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
            C A  W+++K LF EM+DQGVQP +VTF+V++D LCK GK+ EA +LL++M+QR + PN
Sbjct: 282 FCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPN 341

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY++L+DGFC+ G +N A ELF SM S G + D++SY  LINGYCK  +V+EA++LY 
Sbjct: 342 LITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYN 401

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           EM+  G  P V TY TL  GLF+  +V  A KLF  M+   V+A++  Y  F+DGLCKN 
Sbjct: 402 EMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKND 461

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            + EA+ELF  L     +L+I+ Y+CLIDGLCK+G+LE A ELF  L +  L  DVVTYN
Sbjct: 462 CLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYN 521

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           IMIHG C  GQ+D A+ LF  MEEN   P++I + TL+ GF   NK  +VI+LLHKM +K
Sbjct: 522 IMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQK 581

Query: 361 KVMPDASIVSMVVDLL 376
            V P+A+  ++VVD+L
Sbjct: 582 DVSPNAASCTIVVDML 597



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/307 (35%), Positives = 170/307 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT++ +ID LCKEG V +AK L   M    I P+++TYNSLI G C   D N A+ 
Sbjct: 304 QPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARE 363

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M  +G++P  +++  +++  CK  K+ EA  L + M+Q    PN  TY TL+ G  
Sbjct: 364 LFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLF 423

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A++LFG M++ G   +   Y I ++G CKN  + EA+ L+ E+ S   K  + 
Sbjct: 424 QKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIE 483

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ L  GL +  ++E A +LFE++ ++ +  D  TYN  I G CK G +  A  LF  +
Sbjct: 484 NYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKM 543

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  DI AYN L+ G C+  +LE  ++L   + ++ +  +  +  I++  LC D + 
Sbjct: 544 EENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKY 603

Query: 313 DKAHDLF 319
            K  DL 
Sbjct: 604 KKFVDLL 610



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 197/372 (52%), Gaps = 12/372 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   ++N ++ GL K     +  +L+ +M+   ++PD+ T + L + LC+ N  +EA   
Sbjct: 89  PPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAA 148

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              ++ +G  P+VVT+  ++  LC   ++ EA+RL   M +    PNA TY TL+ G C 
Sbjct: 149 MAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQ 208

Query: 134 TGKINRAEELF------GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           TG +N A +L        S   + CK   ++Y+I+I+G CK    +EA  L+ EM ++G+
Sbjct: 209 TGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGM 268

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P V++Y+TL  G     + + +  LF+EM    V  D  T++  ID LCK G + EA +
Sbjct: 269 IPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKK 328

Query: 248 LFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           L   +   GI+    ++  YN LIDG C  G L  A ELF S+P + L  D ++Y  +I+
Sbjct: 329 LLEVMIQRGIVP---NLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLIN 385

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G C   ++ +A +L+ +M +   +PNV  + TL+ G  +  K     +L   MK   V  
Sbjct: 386 GYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSA 445

Query: 365 DASIVSMVVDLL 376
           ++ I  + +D L
Sbjct: 446 NSQIYGIFLDGL 457



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 189/350 (54%), Gaps = 10/350 (2%)

Query: 27  CKEGFVDKAKALF---LQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQ 83
           CK G +   +A     L M+   I P + ++N L+ GL   N +++   L+ EM   G+ 
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPI-PPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLS 123

Query: 84  PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEEL 143
           P + T +++ + LC   ++ EA   +  +++R   PN  TY+TL+ G C+  +I+ A  L
Sbjct: 124 PDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRL 183

Query: 144 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG------IKPTVVTYNTL 197
           F  M+ +GC  + V+Y  LI G C+   V  AL L++EM++         KP V+TY+ +
Sbjct: 184 FLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSII 243

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL ++ + + A +LFEEM+   +  D  +Y+T I G C  G   ++  LF  +     
Sbjct: 244 IDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGV 303

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           + D+  ++ LID LCK G++  A +L   + +R +V +++TYN +I G C  G ++ A +
Sbjct: 304 QPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARE 363

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           LFL M    + P+ I + TLI+G+ +  K  + + L ++M +    P+ +
Sbjct: 364 LFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVT 413


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 187/376 (49%), Positives = 257/376 (68%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M N      + CKPN +TYN I+DGLCK G  D+AK LF +MK + + P +++YNSLIHG
Sbjct: 200 MLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHG 259

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
            C A  W E+KRL  EM+DQG+QP +VTFNV++D LCK GK+ EA +LL +M++  + P+
Sbjct: 260 FCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPD 319

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY++L++GFC+ G +N A ELF SM S GC+ D +SYN+LINGY K  +VEEA+ LY 
Sbjct: 320 LVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYN 379

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           EM+  G +P V+TY++L  G+F   +V+ A KLF  M+   +A ++ TY  F+DGLCKN 
Sbjct: 380 EMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKND 439

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            + EA++LF  L     +L+I+  NCLIDGLCK+G+LE A ELF  L       +VVTY 
Sbjct: 440 CLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYT 499

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           IMIHG C +GQ+DKA+ L   ME N   P++I + TL+ GF   NK  +V++LLH+M +K
Sbjct: 500 IMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQK 559

Query: 361 KVMPDASIVSMVVDLL 376
            V PDA   S+VVD+L
Sbjct: 560 DVSPDAITCSIVVDML 575



 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 197/372 (52%), Gaps = 12/372 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  ++N ++ GL K     +  +L+ QM+   ++ D  T N L++ LC+ N   E    
Sbjct: 67  PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  ++ +G  P++VT+N ++  LC   ++ EA+RL   M +    P+  TY TL+ G C 
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186

Query: 134 TGKINRAEELFGSM------ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           TG IN A +L   M        + CK + ++YNI+++G CK    +EA  L+ EM ++G+
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P++++YN+L  G     + E + +L +EM    +  D  T+N  ID LCK G ++EA +
Sbjct: 247 IPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKK 306

Query: 248 LFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           L   +   GI+    D+  YN LI+G C  G L  A ELF S+P +    DV++YN++I+
Sbjct: 307 LLGVMIESGIVP---DLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLIN 363

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G     ++++A  L+ +M      PNVI + +L+ G     K     +L   MK   +  
Sbjct: 364 GYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAE 423

Query: 365 DASIVSMVVDLL 376
           ++    + +D L
Sbjct: 424 NSYTYGIFLDGL 435



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 105/297 (35%), Positives = 168/297 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT+N +ID LCKEG V +AK L   M    I PD+VTYNSLI G C   D N A+ 
Sbjct: 282 QPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARE 341

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M  +G +P V+++NV+++   K  K++EA +L + M+    RPN  TY +L+ G  
Sbjct: 342 LFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIF 401

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK++ A++LF  M++ G   +  +Y I ++G CKN  + EA+ L+ E+ S   K  + 
Sbjct: 402 LAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIE 461

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
             N L  GL +  ++E A +LFE++  +    +  TY   I G C+ G + +A  L + +
Sbjct: 462 NLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKM 521

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
               C  DI  YN L+ G  +S +LE  ++L   + ++ +  D +T +I++  L  D
Sbjct: 522 EANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKD 578



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 174/339 (51%), Gaps = 8/339 (2%)

Query: 27  CKEGFVDKAKAL--FLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQP 84
           CK G V    AL  F  M      P + ++N L+ GL     +++   L+ +M   G+  
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 85  SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELF 144
              T N++++ LC   ++ E       +++R   PN  TY+TL+ G C+  +I+ A  LF
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 145 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK------GIKPTVVTYNTLF 198
             M+ +GC  D V+Y  LI G C    +  AL L++EM++         KP V+TYN + 
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            GL ++ + + A +LFEEM+   +     +YN+ I G C  G   E+  L   +     +
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQ 282

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            D+  +N LID LCK G++  A +L   +    +V D+VTYN +I G C  G ++ A +L
Sbjct: 283 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAREL 342

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           F+ M      P+VI +  LI+G+ +  K  + ++L ++M
Sbjct: 343 FVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEM 381



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 159/298 (53%), Gaps = 5/298 (1%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E G+V  P+ VTYN++I+G C  G ++ A+ LF+ M  +   PDV++YN LI+G      
Sbjct: 313 ESGIV--PDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLK 370

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             EA +L+ EM+  G +P+V+T++ ++  +   GK+D+A +L  +M    +  N++TY  
Sbjct: 371 VEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGI 430

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
            +DG C    +  A +LF  ++S   K +  + N LI+G CK  ++E A  L+ ++ ++G
Sbjct: 431 FLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEG 490

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            +P VVTY  +  G     QV+ A  L ++M+ +    D  TYNT + G  ++  + E V
Sbjct: 491 HEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVV 550

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           +L   +       D    + ++D L K  + +  L L   LPR  +   V  + +M H
Sbjct: 551 QLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHL---LPRFPIQKGVDKHLLMTH 605


>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 628

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 189/379 (49%), Positives = 262/379 (69%), Gaps = 13/379 (3%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M NGN + G+ CKP  V+Y+ IID LCK+G V++AK  F++MK + I P+VVTY SL+HG
Sbjct: 238 MINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHG 297

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           LC A++W EAKRLF EM+D G+ P VVTF+V++  LCK GK+ EAS L DLMVQR V P+
Sbjct: 298 LCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPS 357

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY+ L++G+CL G ++  +++F SM +  C+HD  SY+IL+  YCK+ EV  A+ LYR
Sbjct: 358 TRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYR 417

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT---STYNTFIDGLC 237
           EM+ +GI+PTV+TY+          +V  A KLF E+Q  D+  D+   S YN ++DGLC
Sbjct: 418 EMMDRGIQPTVITYS----------KVGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLC 467

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           KNG + EA+++F  L   K   ++  +N LI+G+C+S +LEIA ELF  L    L  DVV
Sbjct: 468 KNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVV 527

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           TY IMI+GLC  GQ  KA+DLFL+MEE   APNV+ F TL+ G    ++  K++ELLHKM
Sbjct: 528 TYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKM 587

Query: 358 KEKKVMPDASIVSMVVDLL 376
             +K+ PDAS + +V+D+L
Sbjct: 588 AARKLSPDASTLLIVMDIL 606



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 187/429 (43%), Gaps = 69/429 (16%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    +N +   L K+       ++  +M    +  + ++ N L++ LC      E   +
Sbjct: 105 PALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNILLNCLCSVKRVFEGFVV 164

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  ++ +G +P+  TF  ++  LC  GK+ EA R+  +M   D RP+A T   L+ G C 
Sbjct: 165 FGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLCR 224

Query: 134 TGKINRAEELFGSMES------MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           TG    A +L  +M +      + CK   VSY+ +I+  CK+  VE A   + EM  KGI
Sbjct: 225 TGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGI 284

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P VVTY +L  GL    + E A +LF EM    +  D  T++  I  LCK G + EA  
Sbjct: 285 FPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASG 344

Query: 248 LF------------RTLGIL-----------------------KCELDIQAYNCLIDGLC 272
           LF            RT  IL                       +C+ D  +Y+ L+   C
Sbjct: 345 LFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYC 404

Query: 273 KSGRLEIALELFRSLPRRVLVADVVT----------------------------YNIMIH 304
           K   +  A+ L+R +  R +   V+T                            YN+ + 
Sbjct: 405 KDSEVHGAMILYREMMDRGIQPTVITYSKVGDARKLFGEIQFQDMVLDSISYSIYNVYLD 464

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           GLC +G + +A D+F  +E    A NV IF +LI+G  R  K     EL +++  + + P
Sbjct: 465 GLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQP 524

Query: 365 DASIVSMVV 373
           D    ++++
Sbjct: 525 DVVTYTIMI 533



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 176/375 (46%), Gaps = 17/375 (4%)

Query: 14  PNTVTYNTIIDGL---CKEG--FVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           PNT + N +   L   CK G   + +A   F QM      P +  +N+L   L     + 
Sbjct: 65  PNTQSDNPLEQFLEINCKSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYL 124

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
               +   M   G+  + ++ N++++ LC   ++ E   +  +++++  RPN  T++ L+
Sbjct: 125 HVISMCGRMNSIGLLKNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLV 184

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK--- 185
            G CL GKI  A  +F  M    C+   ++  +LI+G C+      AL L+  M++    
Sbjct: 185 KGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSD 244

Query: 186 -GI--KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
            GI  KPTVV+Y+ +   L +   VE A + F EM+   +  +  TY + + GLC     
Sbjct: 245 FGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEW 304

Query: 243 VEAVELFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
            EA  LF  +   G+L    D+  ++ LI  LCK G+++ A  LF  + +R +     TY
Sbjct: 305 EEAKRLFIEMVDHGLLP---DVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTY 361

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           NI+I G C  G +D+   +FL M       +   +  L+  + + ++    + L  +M +
Sbjct: 362 NILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMD 421

Query: 360 KKVMPDASIVSMVVD 374
           + + P     S V D
Sbjct: 422 RGIQPTVITYSKVGD 436



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 85/160 (53%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           YN  +DGLCK G V +A  +F  ++      +V  +NSLI+G+C +     A  LF  + 
Sbjct: 459 YNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLC 518

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           ++ +QP VVT+ +++  LCK G+  +A  L   M ++   PN  T++TLM G CL  +  
Sbjct: 519 NEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERP 578

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           +  EL   M +     D  +  I+++   K++   E L+L
Sbjct: 579 KIVELLHKMAARKLSPDASTLLIVMDILLKDENYHECLNL 618


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/369 (50%), Positives = 245/369 (66%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M N +   G+  KP  ++Y+ IID LCK+   D+A+ LF +MK + + P V++Y SLIHG
Sbjct: 227 MLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHG 286

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
            C    W EAKRLF EM++QGVQP+VVTFNV++D LCK GK+ EA  LL++M+QR + PN
Sbjct: 287 FCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPN 346

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY++L++GFCL G +N A ELF SM S GC+ D + Y +LINGYCK  +VEEA+ LY 
Sbjct: 347 LLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYN 406

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            M+  G +P V TY  L  GLF+  +V  A KLF  M+   +  D   Y  F++GLCKNG
Sbjct: 407 GMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNG 466

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            + EA+ELF  L     +LDI+ +NCLIDGLCK+G+LE A ELF  LP+  L  DVVTYN
Sbjct: 467 CLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYN 526

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           IMIH  C  GQ+ KA+ LF  ME+N   P+ I + TLI GF    K  KV+ELLH M ++
Sbjct: 527 IMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQR 586

Query: 361 KVMPDASIV 369
            V  D +I+
Sbjct: 587 DVSLDVNIL 595



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 189/372 (50%), Gaps = 12/372 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   ++  ++ GL K     +   L+ QM+   I+PD  T N L++ LC+ N   E   +
Sbjct: 94  PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              ++ +G  P +VT+  ++  LC   ++ +A+ L   M +    PNA TY TLM G C 
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213

Query: 134 TGKINRAEELF------GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           TG I+ A +L        S+  +  K   +SY+I+I+  CK++  +EA  L+ EM  +G+
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            PTV++Y +L  G     + E A +LF EM    V  +  T+N  ID LCK G ++EA +
Sbjct: 274 TPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKD 333

Query: 248 LFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           L   +   GI+    ++  YN LI+G C  G L  A ELF S+P +    DV+ Y ++I+
Sbjct: 334 LLEVMIQRGIVP---NLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLIN 390

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G C   ++++A  L+  M +    P+V  +  L+ G  +  K     +L   MK   +  
Sbjct: 391 GYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPG 450

Query: 365 DASIVSMVVDLL 376
           D  I  + ++ L
Sbjct: 451 DLYIYGIFLNGL 462



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 181/347 (52%), Gaps = 8/347 (2%)

Query: 27  CKEGFVDKAKAL--FLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQP 84
           CK G +   +A   F  M   N  P + ++  L+ GL     +++   L+ +M   G+ P
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 85  SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELF 144
              T N++++ LC   ++ E   ++  +++R   P+  TY+TL+ G C+  +I++A  LF
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 145 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG------IKPTVVTYNTLF 198
             M+ +GC  + ++Y  L+ G C+   +  AL L++EM++         KP V++Y+ + 
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
             L +  + + A  LFEEM+   +     +Y + I G C  G   EA  LF  +     +
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQ 309

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            ++  +N LID LCK G++  A +L   + +R +V +++TYN +I G C  G ++ A +L
Sbjct: 310 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 369

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           F+ M      P+VI +  LI+G+ + +K  + ++L + M +    PD
Sbjct: 370 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPD 416



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 189/369 (51%), Gaps = 6/369 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T N +++ LC    V +  A+   +      PD+VTY +LI GLC  +  ++A  L
Sbjct: 129 PDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALL 188

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR------DVRPNAFTYSTL 127
           F  M   G  P+ +T+  +M  LC+ G +  A +L   M+        + +P   +YS +
Sbjct: 189 FTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSII 248

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D  C   + + A +LF  M+  G     +SY  LI+G+C   + EEA  L+ EMV++G+
Sbjct: 249 IDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGV 308

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P VVT+N L   L +  +V  A  L E M +  +  +  TYN+ I+G C  G +  A E
Sbjct: 309 QPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARE 368

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           LF ++    CE D+  Y  LI+G CK+ ++E A++L+  + +     DV TY  ++ GL 
Sbjct: 369 LFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLF 428

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G++  A  LF  M+   +  ++ I+   ++G  +     + +EL +K+K   +  D  
Sbjct: 429 QGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIE 488

Query: 368 IVSMVVDLL 376
             + ++D L
Sbjct: 489 CFNCLIDGL 497



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 121/253 (47%), Gaps = 8/253 (3%)

Query: 132 CLTGKIN--RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           C TG I   +A + F  M          S+  L++G  K K   +   LY +M   GI P
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
              T N L   L  +++V   L +   + R     D  TY T I GLC    I +A  LF
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR------SLPRRVLVADVVTYNIMI 303
             +  L C  +   Y  L+ GLC++G + IAL+L +      SL        V++Y+I+I
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
             LC D + D+A DLF +M+   + P VI + +LIHGF    K  +   L ++M  + V 
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQ 309

Query: 364 PDASIVSMVVDLL 376
           P+    ++++D+L
Sbjct: 310 PNVVTFNVLIDVL 322


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  355 bits (911), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 182/369 (49%), Positives = 242/369 (65%), Gaps = 8/369 (2%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M N +   G+  KP  ++Y+ IID LCK+   D+A+ LF +MK + + P V++Y SL+  
Sbjct: 227 MLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM-- 284

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
                 W EAKRLF EM++QGVQP+VVTFNV++D LCK GK+ EA  LL++M+QR + PN
Sbjct: 285 ------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPN 338

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY++L++GFCL G +N A ELF SM S GC+ D + Y +LINGYCK  +VEEA+ LY 
Sbjct: 339 LLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYN 398

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            M+  G +P V TY  L  GLF+  +V  A KLF  M+   +  D   Y  F++GLCKNG
Sbjct: 399 GMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNG 458

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            + EA+ELF  L     +LDI+ +NCLIDGLCK+G+LE A ELF  LP+  L  DVVTYN
Sbjct: 459 CLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYN 518

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           IMIH  C  GQ+ KA+ LF  ME+N   P+ I + TLI GF    K  KV+ELLH M ++
Sbjct: 519 IMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQR 578

Query: 361 KVMPDASIV 369
            V  D +I+
Sbjct: 579 DVSLDVNIL 587



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 184/369 (49%), Gaps = 14/369 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   ++  ++ GL K     +   L+ QM+   I+PD  T N L++ LC+ N   E   +
Sbjct: 94  PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              ++ +G  P +VT+  ++  LC   ++ +A+ L   M +    PNA TY TLM G C 
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213

Query: 134 TGKINRAEELF------GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           TG I+ A +L        S+  +  K   +SY+I+I+  CK++  +EA  L+ EM  +G+
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            PTV++Y +L          E A +LF EM    V  +  T+N  ID LCK G ++EA +
Sbjct: 274 TPTVISYTSLMW--------EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKD 325

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +       ++  YN LI+G C  G L  A ELF S+P +    DV+ Y ++I+G C
Sbjct: 326 LLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYC 385

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
              ++++A  L+  M +    P+V  +  L+ G  +  K     +L   MK   +  D  
Sbjct: 386 KTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLY 445

Query: 368 IVSMVVDLL 376
           I  + ++ L
Sbjct: 446 IYGIFLNGL 454


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 177/381 (46%), Positives = 248/381 (65%), Gaps = 16/381 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE------NINPDVVTYNSLIHGLCHAN 65
           C P+ VTY T+I GLC  G ++ A  L  +M  +      N  P+V+TYN ++ GLC   
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229

Query: 66  DWNEAKRLF----------FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
             +EAK+LF           EM+DQG+QP +VTFNV++D LCK GK+ EA +LL +M++ 
Sbjct: 230 REDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES 289

Query: 116 DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
            + P+  TY++L++GFC+ G +N A ELF SM S GC+ D +SYN+LINGY K  +VEEA
Sbjct: 290 GIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEA 349

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
           + LY EM+  G +P V+TY++L  G+F   +V+ A KLF  M+   +A ++ TY  F+DG
Sbjct: 350 MKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDG 409

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           LCKN  + EA++LF  L     +L+I+  NCLIDGLCK+G+LE A ELF  L       +
Sbjct: 410 LCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPN 469

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           VVTY IMIHG C +GQ+DKA+ L   ME N   P++I + TL+ GF   NK  +V++LLH
Sbjct: 470 VVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLH 529

Query: 356 KMKEKKVMPDASIVSMVVDLL 376
           +M +K V PDA   S+VVD+L
Sbjct: 530 RMAQKDVSPDAITCSIVVDML 550



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 105/297 (35%), Positives = 168/297 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT+N +ID LCKEG V +AK L   M    I PD+VTYNSLI G C   D N A+ 
Sbjct: 257 QPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARE 316

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M  +G +P V+++NV+++   K  K++EA +L + M+    RPN  TY +L+ G  
Sbjct: 317 LFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIF 376

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK++ A++LF  M++ G   +  +Y I ++G CKN  + EA+ L+ E+ S   K  + 
Sbjct: 377 LAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIE 436

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
             N L  GL +  ++E A +LFE++  +    +  TY   I G C+ G + +A  L + +
Sbjct: 437 NLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKM 496

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
               C  DI  YN L+ G  +S +LE  ++L   + ++ +  D +T +I++  L  D
Sbjct: 497 EANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKD 553



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 183/369 (49%), Gaps = 24/369 (6%)

Query: 27  CKEGFVDKAKAL--FLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQP 84
           CK G V    AL  F  M      P + ++N L+ GL     +++   L+ +M   G+  
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 85  SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELF 144
              T N++++ LC   ++ E       +++R   PN  TY+TL+ G C+  +I+ A  LF
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 145 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK------GIKPTVVTYNTLF 198
             M+ +GC  D V+Y  LI G C    +  AL L++EM++         KP V+TYN + 
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 199 LGLFEIHQVEHALKLFEEMQR----------DDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
            GL ++ + + A +LFEEM+             +  D  T+N  ID LCK G ++EA +L
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL 282

Query: 249 FRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
              +   GI+    D+  YN LI+G C  G L  A ELF S+P +    DV++YN++I+G
Sbjct: 283 LGVMIESGIVP---DLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLING 339

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
                ++++A  L+ +M      PNVI + +L+ G     K     +L   MK   +  +
Sbjct: 340 YSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAEN 399

Query: 366 ASIVSMVVD 374
           +    + +D
Sbjct: 400 SYTYGIFLD 408



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 181/346 (52%), Gaps = 16/346 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  ++N ++ GL K     +  +L+ QM+   ++ D  T N L++ LC+ N   E    
Sbjct: 67  PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  ++ +G  P++VT+N ++  LC   ++ EA+RL   M +    P+  TY TL+ G C 
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186

Query: 134 TGKINRAEELFGSM------ESMGCKHDDVSYNILINGYCKNKEVEEALSLYR------- 180
           TG IN A +L   M        + CK + ++YNI+++G CK    +EA  L+        
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246

Query: 181 ---EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
              EM+ +G++P +VT+N L   L +  +V  A KL   M    +  D  TYN+ I+G C
Sbjct: 247 IPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFC 306

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
             G +  A ELF ++    CE D+ +YN LI+G  K+ ++E A++L+  +       +V+
Sbjct: 307 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVI 366

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           TY+ ++ G+   G++D A  LF  M+ + +A N   +   + G  +
Sbjct: 367 TYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCK 412



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 159/298 (53%), Gaps = 5/298 (1%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E G+V  P+ VTYN++I+G C  G ++ A+ LF+ M  +   PDV++YN LI+G      
Sbjct: 288 ESGIV--PDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLK 345

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             EA +L+ EM+  G +P+V+T++ ++  +   GK+D+A +L  +M    +  N++TY  
Sbjct: 346 VEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGI 405

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
            +DG C    +  A +LF  ++S   K +  + N LI+G CK  ++E A  L+ ++ ++G
Sbjct: 406 FLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEG 465

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            +P VVTY  +  G     QV+ A  L ++M+ +    D  TYNT + G  ++  + E V
Sbjct: 466 HEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVV 525

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           +L   +       D    + ++D L K  + +  L L   LPR  +   V  + +M H
Sbjct: 526 QLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHL---LPRFPIQKGVDKHLLMTH 580


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  340 bits (872), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 176/364 (48%), Positives = 242/364 (66%), Gaps = 20/364 (5%)

Query: 14  PNTVTYNT-----------------IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNS 56
           P+ VTYNT                 IIDGLCK G  D+AK +F +MK + + P+V++Y+S
Sbjct: 43  PDIVTYNTLIKGLCRVHRISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSS 102

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
           L+HG C A    E+KRLF EM+DQGVQP++V FNV++D LCK GK+ EA +LL++ +QR 
Sbjct: 103 LVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRG 162

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           +  +  TY++L+DGFC  G ++ A +LF SM S GC+H+++SY ILINGYCK  +VEEA+
Sbjct: 163 IILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAM 222

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           +LY EM   G +P V TY+TL  GL +  +V  A KLF  M+   ++ D+  Y  F+DGL
Sbjct: 223 NLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGL 282

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           CKNG + EA+ELF  L     +LD ++Y+ LIDGLCK+G++EIA E F+ L +  L  +V
Sbjct: 283 CKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNV 342

Query: 297 VTYNIMIHGLCNDGQMDKAHDLF---LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
           VT NIMIHG C   Q+DKA+ LF     MEEN   P++I + TL+ GF   NK  +V+ L
Sbjct: 343 VTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNL 402

Query: 354 LHKM 357
           LHKM
Sbjct: 403 LHKM 406



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/282 (35%), Positives = 157/282 (55%), Gaps = 3/282 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V +N +ID LCKEG V +AK L        I  D+VTYNSLI G C   D + A++
Sbjct: 129 QPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARK 188

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M  +G + + +++ ++++  CK  K++EA  L + M Q   RPN  TYSTL+ G  
Sbjct: 189 LFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLL 248

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            TGK+  A +LFG M++ G   D   Y I ++G CKN  + EA+ L+ E+ S   K    
Sbjct: 249 QTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFE 308

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y+ L  GL +  +VE A + F+++ ++ +  +  T N  I G C+   + +A  LF  +
Sbjct: 309 SYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKM 368

Query: 253 GILK---CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
             ++   C  DI  YN L+ G C+S +LE  + L   + +R+
Sbjct: 369 EKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKRM 410



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 172/330 (52%), Gaps = 18/330 (5%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           ++PD+ T N L + LC+ N  +E       ++ +G  P +VT+N ++  LC+  ++  A+
Sbjct: 6   LSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVAT 65

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
                               ++DG C  G  + A+E+F  M++ G   + +SY+ L++G+
Sbjct: 66  ------------------CIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGF 107

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           C   ++EE+  L+ EMV +G++P +V +N L   L +  +V  A KL E   +  +  D 
Sbjct: 108 CCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDL 167

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            TYN+ IDG CK G +  A +LF ++    CE +  +Y  LI+G CK  ++E A+ L+  
Sbjct: 168 VTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNE 227

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +P+     +V TY+ ++ GL   G++  A+ LF  M+ + ++ +  I+V  + G  +   
Sbjct: 228 MPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGV 287

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             + +EL +++K      D    S ++D L
Sbjct: 288 LFEAMELFNELKSYNFKLDFESYSRLIDGL 317



 Score =  120 bits (302), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 115/209 (55%), Gaps = 3/209 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N ++Y  +I+G CK   V++A  L+ +M      P+V TY++L+ GL       +A 
Sbjct: 198 CEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDAN 257

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +LF  M   G+      + + +D LCKNG + EA  L + +   + + +  +YS L+DG 
Sbjct: 258 KLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGL 317

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS---KGIK 188
           C  GK+  A E F  +   G + + V+ NI+I+G+C+ ++V++A  L+ +M      G  
Sbjct: 318 CKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCT 377

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           P ++TYNTL  G  E +++E  + L  +M
Sbjct: 378 PDIITYNTLLRGFCESNKLEEVVNLLHKM 406



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 117/244 (47%), Gaps = 17/244 (6%)

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M   G   D  + NIL N  C    V E L+    ++ +G  P +VTYNTL  GL  +H+
Sbjct: 1   MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60

Query: 207 V-----------------EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           +                 + A ++FEEM+   +  +  +Y++ + G C  G + E+  LF
Sbjct: 61  ISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLF 120

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +     + ++  +N LID LCK G++  A +L     +R ++ D+VTYN +I G C  
Sbjct: 121 NEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKI 180

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G +  A  LFL M       N I +  LI+G+ +I K  + + L ++M +    P+    
Sbjct: 181 GDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTY 240

Query: 370 SMVV 373
           S ++
Sbjct: 241 STLL 244


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  339 bits (869), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 173/371 (46%), Positives = 241/371 (64%), Gaps = 6/371 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE------NINPDVVTYNSLIHGLCHAN 65
           C PN VTY T+I GLC  G ++ A     +M  +      N  P+V++Y+ +I GLC   
Sbjct: 192 CTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVG 251

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
           +W EA  LF EM+DQGVQP+VVTF+V++D LCK G++ +A +LL++M+Q  + PN FTY+
Sbjct: 252 NWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYT 311

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           +L+ GFCL G +N A+ELF SM S G + D +SYN+LINGYCK  +VEEA+ L+ EM+  
Sbjct: 312 SLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHV 371

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G+ P V T   L   LF   +V+ A +LF  ++   +  D      F+DGLCKNGYI EA
Sbjct: 372 GMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEA 431

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           ++LF  L     +LDI+ + CLIDGLCK+G+LE A ELF  L    +  D + Y+ MIHG
Sbjct: 432 MKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHG 491

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            C  GQ+DKA+ LF  MEEN  +P++I +  L+ GF   NK  KV++LLH+M EK V PD
Sbjct: 492 FCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPD 551

Query: 366 ASIVSMVVDLL 376
             I ++V D++
Sbjct: 552 DGIYAIVEDMV 562



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 191/397 (48%), Gaps = 41/397 (10%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++N ++ GL K     +  +L+ QM    + PD++T N LI+ LC+ N  NE       +
Sbjct: 93  SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGI 152

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           M +G  P VVTF  ++  LC   ++ EA++L   M +    PN  TY TL+ G C  G I
Sbjct: 153 MRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNI 212

Query: 138 NRAEELFGSMES------MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           N A +    M +        C+ + +SY+I+I+G CK    EEA+ L+ EMV +G++P V
Sbjct: 213 NIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNV 272

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT++ L   L +  QV  A KL E M +  +  +  TY + I G C  G +  A ELF +
Sbjct: 273 VTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVS 332

Query: 252 LGILKCELDIQAYNCLIDGLCKS-----------------------------------GR 276
           +     E D+ +YN LI+G CK+                                   G+
Sbjct: 333 MPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGK 392

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           ++ A ELFR +    +  D+    I + GLC +G + +A  LF ++E   +  ++  F  
Sbjct: 393 VDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGC 452

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           LI G  +  K     EL  K+ E+ + PDA   S ++
Sbjct: 453 LIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMI 489



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 166/307 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VT++ +ID LCKEG V KAK L   M    I P++ TY SLI G C   D N AK 
Sbjct: 269 QPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKE 328

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M  +G +P V+++N++++  CK  K++EA +L + M+   + P+  T   L+    
Sbjct: 329 LFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALF 388

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK++ A+ELF  ++      D     I ++G CKN  + EA+ L+ E+ S  +K  + 
Sbjct: 389 LAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIE 448

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+  L  GL +  ++E A +LFE++  + +  D   Y++ I G CK G + +A  LF+ +
Sbjct: 449 TFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKM 508

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D+  Y+ L+ G  +S +LE  ++L   +  + +  D   Y I+   +C D + 
Sbjct: 509 EENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKY 568

Query: 313 DKAHDLF 319
            +  DL 
Sbjct: 569 KEWLDLL 575



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 169/331 (51%), Gaps = 6/331 (1%)

Query: 50  DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
            + ++N L+ GL     +++   L+ +M   G+ P ++T N++++ LC   +++E    +
Sbjct: 90  SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149

Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
             +++R   P+  T++TL+ G C+  +I  A +LF  M+ +GC  + V+Y  LI G C  
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209

Query: 170 KEVEEALSLYREMVSK------GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVA 223
             +  AL  ++EM++         +P V++Y+ +  GL ++   E A+ LF EM    V 
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL 283
            +  T++  ID LCK G +++A +L   +  +    ++  Y  LI G C  G L  A EL
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKEL 329

Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           F S+P +    DV++YN++I+G C   ++++A  LF +M    + P+V     L+     
Sbjct: 330 FVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFL 389

Query: 344 INKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             K     EL   +K   +  D  I  + +D
Sbjct: 390 AGKVDDAKELFRVIKPYAMPKDLCICCIFLD 420



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 132/244 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ ++YN +I+G CK   V++A  LF +M    + PDV T   L+  L  A   ++AK 
Sbjct: 339 EPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKE 398

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  +    +   +    + +D LCKNG + EA +L + +   +++ +  T+  L+DG C
Sbjct: 399 LFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLC 458

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A ELF  +   G + D ++Y+ +I+G+CK  +V++A  L+++M   G  P ++
Sbjct: 459 KAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLI 518

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L  G +E +++E  ++L   M   DV  D   Y    D +CK+    E ++L +  
Sbjct: 519 TYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRF 578

Query: 253 GILK 256
            + K
Sbjct: 579 FVQK 582



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 147/309 (47%), Gaps = 10/309 (3%)

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           FF++M +    S+ +FN ++  L K     +   L   M    + P+  T + L++  C 
Sbjct: 83  FFDLMMR----SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCN 138

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +IN        +   G   D V++  LI G C    + EA  L+  M   G  P VVT
Sbjct: 139 VNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVT 198

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRD------DVAADTSTYNTFIDGLCKNGYIVEAVE 247
           Y TL  GL  +  +  ALK  +EM  D      +   +  +Y+  IDGLCK G   EA+ 
Sbjct: 199 YGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAIC 258

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           LF  +     + ++  ++ LID LCK G++  A +L   + +  +V ++ TY  +I G C
Sbjct: 259 LFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFC 318

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G ++ A +LF+ M      P+VI +  LI+G+ +  K  + ++L ++M    + PD  
Sbjct: 319 LVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVK 378

Query: 368 IVSMVVDLL 376
              +++  L
Sbjct: 379 TSGVLLKAL 387


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  329 bits (844), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 172/371 (46%), Positives = 239/371 (64%), Gaps = 6/371 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM------KGENINPDVVTYNSLIHGLCHAN 65
           C PN VTY T+I GLC+ G ++ A  L  +M         N  P++ +YN +I  LC   
Sbjct: 192 CWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIG 251

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            W EAKRLF EM+DQGV+P VVTF+ ++D LCK G + EA + L+ M+ R + P+ FT++
Sbjct: 252 KWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFT 311

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           +L++GFCL G ++ A+ELF SM S G + D +SY +LI GYCK   VEEA+ LY EM+  
Sbjct: 312 SLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRV 371

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G  P + T+  L  GLF   +V  A KLF  ++   V  +    + F+DGLCKNG + EA
Sbjct: 372 GKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEA 431

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           +ELF  L     +LDI+++NCLIDGLCK+ +LE A ELF  L +  L  DVVTY IMI+G
Sbjct: 432 MELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMING 491

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            C +GQ+D A+ LF  MEEN   PN++ +  L+HGF + NK  +V++LLHKM +K V   
Sbjct: 492 FCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLA 551

Query: 366 ASIVSMVVDLL 376
           ASI ++V D++
Sbjct: 552 ASIYTIVEDMV 562



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 181/355 (50%), Gaps = 11/355 (3%)

Query: 27  CKEGFVDKAKAL-FLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPS 85
           CK+G +   +AL F  +   +I    +++N L+  L     +++   L+ +M   G+ P+
Sbjct: 70  CKKGNITSTQALQFFDLMMRSI----ISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPN 125

Query: 86  VVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFG 145
             T N++++ LC   ++ E    +  +++R   P+  TY++L+ G C+  +I+ A  LF 
Sbjct: 126 FFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFI 185

Query: 146 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK------GIKPTVVTYNTLFL 199
            M+ +GC  + V+Y  LI G C+   +  AL L++EM++         KP + +YN +  
Sbjct: 186 RMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIID 245

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
            L +I + + A +LF EM    V  D  T++  ID LCK G ++EA +   T+ +     
Sbjct: 246 ELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVP 305

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           D+  +  LI+G C  G L+ A ELF S+P +    DV++Y ++I+G C    +++A  L+
Sbjct: 306 DLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLY 365

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +M      P++  F  L+ G     K     +L   +K   V  +  I S+ +D
Sbjct: 366 NEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLD 420



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 185/364 (50%), Gaps = 6/364 (1%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           +++N ++  L K     +  +L+ +M    ++P+  T N LI+ LC+ N   E       
Sbjct: 92  ISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAG 151

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           +M +G  P VVT+  ++  LC   ++ EA+RL   M +    PN  TY TL+ G C TG 
Sbjct: 152 IMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGN 211

Query: 137 INRAEELFGSM------ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           IN A +L   M       ++ CK +  SYNI+I+  CK  + +EA  L+ EMV +G++P 
Sbjct: 212 INLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPD 271

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVT++ L   L +   V  A K  E M    +  D  T+ + I+G C  G +  A ELF 
Sbjct: 272 VVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFL 331

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
           ++     E D+ +Y  LI G CK+  +E A++L+  + R     D+ T+ +++ GL   G
Sbjct: 332 SMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAG 391

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++  A  LF  ++ +AV  N+ I    + G  +     + +EL +++K   +  D    +
Sbjct: 392 KVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFN 451

Query: 371 MVVD 374
            ++D
Sbjct: 452 CLID 455


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  311 bits (797), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 156/365 (42%), Positives = 228/365 (62%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN   YNTIID LCK+  V +A  LF +M  + I+PD+ TYNSLIH LC+  +W    
Sbjct: 197 CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVA 256

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+D  + P VV+FN ++D LCK GK+ EA  ++D M+QR V PN  TY+ LMDG 
Sbjct: 257 TLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGH 316

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL  +++ A ++F +M   GC  + +SYN LINGYCK + +++A+ L+ EM  + + P  
Sbjct: 317 CLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDT 376

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+TL  GL  + +++ A+ LF EM       +  TY   +D LCKN Y+ EA+ L + 
Sbjct: 377 VTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKA 436

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DIQ  N  IDG+C++G LE A +LF +L  + L  DV TY+IMI+GLC  G 
Sbjct: 437 IEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGL 496

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A  LF +M+EN    N  I+ T+  GF+R N+ S+ I+LL +M  +    DAS +++
Sbjct: 497 LDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTL 556

Query: 372 VVDLL 376
            V +L
Sbjct: 557 FVKML 561



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 191/363 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TV +N ++  + K        +L  QM    I P++ T + LI+  CH N    A  +
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G QP   TF  ++  +   GK+ EA  L D M+    RP+  TY TL++G C 
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A  L GSM    C+ +  +YN +I+  CK+++V EA +L+ EMV+KGI P + T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L   L  + + +H   L  EM    +  D  ++NT +D LCK G + EA ++   + 
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E ++  Y  L+DG C    ++ A+++F ++  +  + +V++YN +I+G C   ++D
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA  LF +M    + P+ + + TLIHG   + +    I L H+M     +P+     +++
Sbjct: 359 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 418

Query: 374 DLL 376
           D L
Sbjct: 419 DYL 421



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 163/297 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V++NT++D LCKEG V +A  +  +M    + P+VVTY +L+ G C  ++ +EA ++
Sbjct: 269 PDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKV 328

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+ +G  P+V+++N +++  CK  ++D+A  L   M ++++ P+  TYSTL+ G C 
Sbjct: 329 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCH 388

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++  A  LF  M +     + V+Y IL++  CKN+ + EA++L + +    + P +  
Sbjct: 389 VERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQV 448

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            N    G+    ++E A  LF  +    +  D  TY+  I+GLC+ G + EA +LFR + 
Sbjct: 449 NNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMD 508

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
              C L+   YN +  G  ++     A++L + +  R   AD  T  + +  L +DG
Sbjct: 509 ENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 565



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 84/229 (36%), Positives = 131/229 (57%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN ++YNT+I+G CK   +DKA  LF +M  + + PD VTY++LIHGLCH     +A 
Sbjct: 337 CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAI 396

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+     P++VT+ +++D LCKN  + EA  LL  +   ++ P+    +  +DG 
Sbjct: 397 ALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGM 456

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++  A +LF ++ S G + D  +Y+I+ING C+   ++EA  L+REM   G     
Sbjct: 457 CRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNG 516

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
             YNT+  G    ++   A++L +EM     +AD ST   F+  L  +G
Sbjct: 517 CIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 565



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 149/306 (48%), Gaps = 6/306 (1%)

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD---VRP 119
           H N  + A   F  M+     PS V FN ++  +    KM   S LL L  Q D   + P
Sbjct: 38  HFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSI---AKMKHHSTLLSLSHQMDSFGIPP 94

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           N +T   L++ FC   ++  A  +   +  +G + D  ++  LI G     ++ EAL L+
Sbjct: 95  NIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLF 154

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            +M+ +G +P VVTY TL  GL ++     A++L   M + +   +   YNT ID LCK+
Sbjct: 155 DKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKD 214

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
             + EA  LF  +       DI  YN LI  LC     +    L   +    ++ DVV++
Sbjct: 215 RQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSF 274

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           N ++  LC +G++ +AHD+   M +  V PNV+ +  L+ G   +++  + +++   M  
Sbjct: 275 NTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVC 334

Query: 360 KKVMPD 365
           K  MP+
Sbjct: 335 KGCMPN 340



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 90/170 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  ++D LCK  ++ +A AL   ++G N++PD+   N  I G+C A +   A+ L
Sbjct: 409 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 468

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  +  +G+QP V T++++++ LC+ G +DEAS+L   M +     N   Y+T+  GF  
Sbjct: 469 FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLR 528

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
             + +RA +L   M + G   D  +  + +     +   +    + RE V
Sbjct: 529 NNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILREFV 578



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 98/240 (40%), Gaps = 35/240 (14%)

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           ++ A+S +  M+     P+ V +N L   + ++      L L  +M    +  +  T + 
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            I+  C    +  A  +   +  L  + D   +  LI G+   G++  AL LF  +    
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161

Query: 292 LVADVVTYNIMIHG-----------------------------------LCNDGQMDKAH 316
              DVVTY  +I+G                                   LC D Q+ +A 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +LF +M    ++P++  + +LIH    + +   V  LL++M + K+MPD    + VVD L
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/185 (21%), Positives = 77/185 (41%)

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +++N         + ++ A+  F  M R      T  +N  +  + K  +    + L   
Sbjct: 27  LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       +I   + LI+  C   R+  A  +   + +     D  T+  +I G+  +G+
Sbjct: 87  MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGK 146

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + +A  LF  M      P+V+ + TLI+G  ++   S  I LL  M +K   P+    + 
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206

Query: 372 VVDLL 376
           ++D L
Sbjct: 207 IIDSL 211



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 50/102 (49%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TY+ +I+GLC+ G +D+A  LF +M       +   YN++  G    N+ + A +
Sbjct: 478 QPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQ 537

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
           L  EM+ +G      T  + +  L  +G      ++L   VQ
Sbjct: 538 LLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILREFVQ 579


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 150/366 (40%), Positives = 230/366 (62%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           IG    P+ V Y++++DGLC+ G + +A   F +M+G  I+ DV TYNSLIHGL  A  W
Sbjct: 173 IGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLW 232

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            E       M+D+G  P   TF +++D LCK GK+ EA ++L+LM  +   P+  TY+TL
Sbjct: 233 KEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTL 292

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           M+G CL G++  A +LF S+   G K +  SYNILINGYCK+++++EA  L+ EM  KG+
Sbjct: 293 MNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGL 352

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP+ VTYNTL   L +  +V  A KLF EMQ        STY   +DGLCKNG++ EA++
Sbjct: 353 KPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAID 412

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           LF+++   + + +I+ ++ L+DG+C++G+LE A + F  + +  L  D + YNI+I+GLC
Sbjct: 413 LFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLC 472

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           N G + +A  L   MEE    P+ I F  +I   ++ N+  + I+LL +M+ +   PD +
Sbjct: 473 NKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEA 532

Query: 368 IVSMVV 373
           + SM++
Sbjct: 533 VTSMLL 538



 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 127/362 (35%), Positives = 210/362 (58%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CK +  TY  IID LCK+G   +A  +F +M G  I PDVV Y+SL+ GLC      EA 
Sbjct: 142 CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEAL 201

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             F EM  +G+   V T+N ++  L + G   E +  L+LMV R   P+AFT++ L+DG 
Sbjct: 202 EFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGL 261

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+  A+++   M   G + D ++YN L+NG C   ++E+A  L+  +  +GIK  V
Sbjct: 262 CKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNV 321

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +YN L  G  +  +++ A +LFEEM+   +   T TYNT I  LC++G +  A +LF  
Sbjct: 322 FSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVE 381

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +      L +  Y  L+DGLCK+G LE A++LF+S+ +     ++  ++I++ G+C  G+
Sbjct: 382 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 441

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A   F ++ +N + P+ I +  LI+G       S+ ++LL +M+EK  +PD+   ++
Sbjct: 442 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNV 501

Query: 372 VV 373
           ++
Sbjct: 502 II 503



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 162/310 (52%), Gaps = 1/310 (0%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           PD VT  +L+ G+   N   +A +LF EM ++G+     T+ ++++ LCK  K   A +L
Sbjct: 75  PDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKL 134

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
            + M + + + + FTY  ++D  C  G    A ++F  M   G   D V Y+ L++G C+
Sbjct: 135 HEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCR 193

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
              ++EAL  ++EM  +GI   V TYN+L  GL      +        M     + D  T
Sbjct: 194 FGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFT 253

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           +   IDGLCK G + EA ++   +     E DI  YN L++GLC  G+LE A +LF SL 
Sbjct: 254 FTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLA 313

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
            R +  +V +YNI+I+G C D ++D+A  LF +M    + P+ + + TLI    +  +  
Sbjct: 314 DRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVR 373

Query: 349 KVIELLHKMK 358
              +L  +M+
Sbjct: 374 TAQKLFVEMQ 383



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 114/219 (52%), Gaps = 9/219 (4%)

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G + D V+   L+ G      + +A+ L+ EM  KG+     TY  L  GL +  +   A
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCL 267
           +KL E+M + +   D  TY   ID LCK+G   EA+++F  +   GIL    D+  Y+ L
Sbjct: 132 IKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILP---DVVVYSSL 187

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD-MEENA 326
           +DGLC+ GRL+ ALE F+ +  R + ADV TYN +IHGL   G + K    FL+ M +  
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAG-LWKEVTWFLNLMVDRG 246

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +P+   F  LI G  +  K  +  ++L  M  K   PD
Sbjct: 247 FSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPD 285


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  305 bits (782), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 149/366 (40%), Positives = 229/366 (62%)

Query: 8    IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
            IG    P+ V Y++++DGLC+ G + +A   F +M+G  I+ DV TYNSLIHGL  A  W
Sbjct: 1112 IGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLW 1171

Query: 68   NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             E       M+D+G  P   TF +++D LCK GK+ EA ++L+LM  +   P+  TY+TL
Sbjct: 1172 KEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTL 1231

Query: 128  MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
            M+G CL G++  A +LF S+   G K +  SYNILINGYCK+++++EA   + EM  KG+
Sbjct: 1232 MNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGL 1291

Query: 188  KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            KP+ VTYNTL   L +  +V  A KLF EMQ        STY   +DGLCKNG++ EA++
Sbjct: 1292 KPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMD 1351

Query: 248  LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            LF+++   + + +I+ ++ L+DG+C++G+LE A + F  + +  L  D + YNI+I+GLC
Sbjct: 1352 LFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLC 1411

Query: 308  NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            N G + +A  L   MEE    P+ I F  +I   ++ N+  + I+LL +M+ +   PD +
Sbjct: 1412 NKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEA 1471

Query: 368  IVSMVV 373
            + SM++
Sbjct: 1472 VTSMLL 1477



 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 126/362 (34%), Positives = 209/362 (57%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            CK +  TY  IID LCK+G   +A  +F +M G  I PDVV Y+SL+ GLC      EA 
Sbjct: 1081 CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEAL 1140

Query: 72   RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
              F EM  +G+   V T+N ++  L + G   E +  L+LMV R   P+AFT++ L+DG 
Sbjct: 1141 EFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGL 1200

Query: 132  CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            C  GK+  A+++   M   G + D ++YN L+NG C   ++E+A  L+  +  +GIK  V
Sbjct: 1201 CKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNV 1260

Query: 192  VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             +YN L  G  +  +++ A + FEEM+   +   T TYNT I  LC++G +  A +LF  
Sbjct: 1261 FSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVE 1320

Query: 252  LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
            +      L +  Y  L+DGLCK+G LE A++LF+S+ +     ++  ++I++ G+C  G+
Sbjct: 1321 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 1380

Query: 312  MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            +++A   F ++ +N + P+ I +  LI+G       S+ ++LL +M+EK  +PD+   ++
Sbjct: 1381 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNV 1440

Query: 372  VV 373
            ++
Sbjct: 1441 II 1442



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 183/380 (48%), Gaps = 36/380 (9%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P T T+N ++  + K G+      ++ ++    I PD+ T N LIH  C          +
Sbjct: 944  PCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGV 1003

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            F   + +G +P  VT   ++  +     + +A +L D M ++ +  +A TY  L++G C 
Sbjct: 1004 FGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCK 1063

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              K   A +L   M+   CK D  +Y ++I+  CK+    EAL ++ EM+  GI P VV 
Sbjct: 1064 ARKTGLAIKLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVV 1122

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT---------------------- 231
            Y++L  GL    +++ AL+ F+EM+   ++AD  TYN+                      
Sbjct: 1123 YSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMV 1182

Query: 232  -------------FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                          IDGLCK G + EA ++   +     E DI  YN L++GLC  G+LE
Sbjct: 1183 DRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLE 1242

Query: 279  IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
             A +LF SL  R +  +V +YNI+I+G C D ++D+A   F +M    + P+ + + TLI
Sbjct: 1243 DATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLI 1302

Query: 339  HGFVRINKPSKVIELLHKMK 358
                +  +     +L  +M+
Sbjct: 1303 GALCQSGRVRTAQKLFVEMQ 1322



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 151/298 (50%), Gaps = 3/298 (1%)

Query: 81   GVQPSVVTFNVIMDELCKNG--KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            G + S+  F   + + C+ G  K+++A +L D  +  +  P   T++ L+      G  +
Sbjct: 904  GTKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYS 963

Query: 139  RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
                ++  +  +G + D  + NILI+  C  + V     ++   + +G +P  VT  TL 
Sbjct: 964  TVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLV 1023

Query: 199  LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
             G++  + +  A++LF+EM +  +  D  TY   I+GLCK      A++L   +    C+
Sbjct: 1024 KGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKG-NCK 1082

Query: 259  LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
             D+  Y  +ID LCK G    AL++F  +    ++ DVV Y+ ++ GLC  G++ +A + 
Sbjct: 1083 GDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEF 1142

Query: 319  FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            F +ME   ++ +V  + +LIHG  R     +V   L+ M ++   PDA   ++++D L
Sbjct: 1143 FKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGL 1200



 Score = 38.1 bits (87), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 34/71 (47%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            C P+++T+N II  L KE  + +A  L  +M+  N +PD    + L+        W+ A 
Sbjct: 1431 CLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAAL 1490

Query: 72   RLFFEMMDQGV 82
                  + +GV
Sbjct: 1491 VSLPNALQKGV 1501


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  301 bits (771), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 150/365 (41%), Positives = 227/365 (62%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN + YNTIID LCK+  V +A  LF +M  + I+PD+ TYNSLIH LC+  +W    
Sbjct: 286 CRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVT 345

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM++  + P+VV F+ ++D LCK G +  A  ++D+M++R V P+  TY+ LMDG 
Sbjct: 346 TLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGH 405

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL  +++ A ++F +M   GC  +  SYNILINGYC+ + +++A+ L  +M  +G+    
Sbjct: 406 CLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADT 465

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  GL  + +++HA+ LF EM       D  TY   +D LCKN ++ EA+ L + 
Sbjct: 466 VTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA 525

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DI  YN  IDG+C++G LE A +LF +L  + L  DV TYNIMIHGLC  G 
Sbjct: 526 IEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGL 585

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A+ LF  M+EN  + +  I+ T+I GF+R N+     +LL +M  +    D S  ++
Sbjct: 586 LDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTL 645

Query: 372 VVDLL 376
           +V++L
Sbjct: 646 IVEML 650



 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 185/363 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TV +  ++  + K        +L  QM    I PDV T N LI+  CH      A  +
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G QP   TFN ++  LC  GK+ EA  L D  +    +P+  TY TLM+G C 
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A  L  SM    C+ + ++YN +I+  CK+++V EA +L+ EM++KGI P + T
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L   L  + + +H   L  EM    +  +   ++T +D LCK G I  A ++   + 
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 387

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E D+  Y  L+DG C    ++ A+++F ++  +  V +V +YNI+I+G C   +MD
Sbjct: 388 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 447

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA  L   M    +  + + + TLIHG   + +    I L H+M     +PD     +++
Sbjct: 448 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 507

Query: 374 DLL 376
           D L
Sbjct: 508 DYL 510



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 159/297 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V ++T++D LCKEG +  A  +   M    + PDVVTY +L+ G C  ++ +EA ++
Sbjct: 358 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKV 417

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+ +G  P+V ++N++++  C+  +MD+A  LL+ M  + +  +  TY+TL+ G C 
Sbjct: 418 FDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCH 477

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A  LF  M + G   D V+Y IL++  CKN  + EA+ L + +    +   ++ 
Sbjct: 478 VGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILV 537

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN    G+    ++E A  LF  +    +  D  TYN  I GLCK G + EA +LFR + 
Sbjct: 538 YNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMD 597

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
              C  D   YN +I G  +S     A +L + +      ADV T  +++  L +DG
Sbjct: 598 ENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDG 654



 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 133/243 (54%), Gaps = 1/243 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  +YN +I+G C+   +DKA  L  QM  + +  D VTYN+LIHGLCH      A 
Sbjct: 426 CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAI 485

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+  G  P +VT+ +++D LCKN  + EA  LL  +   ++  +   Y+  +DG 
Sbjct: 486 ALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGM 545

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++  A +LF ++ S G + D  +YNI+I+G CK   ++EA  L+R+M   G     
Sbjct: 546 CRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDG 605

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             YNT+  G    ++   A +L +EM  +  +AD ST    ++ L  +G + ++ E  R 
Sbjct: 606 CIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDG-LDQSFERLRL 664

Query: 252 LGI 254
            G+
Sbjct: 665 RGV 667



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 157/342 (45%), Gaps = 41/342 (11%)

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD---VRP 119
           H N  ++A   F  M+     PS V F  ++  +    KM   S +L L  Q D   + P
Sbjct: 127 HFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSI---AKMKHYSTVLSLSTQMDSFGIPP 183

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           + +T + L++ FC   ++  A  +   +  +GC+ D+ ++N LI G C   ++ EAL L+
Sbjct: 184 DVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLF 243

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            + + +G +P VVTY TL  GL ++     A++L   M + +   +   YNT ID LCK+
Sbjct: 244 DKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKD 303

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLI------------------------------- 268
             + EA  LF  +       DI  YN LI                               
Sbjct: 304 RQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF 363

Query: 269 ----DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
               D LCK G + IA ++   + +R +  DVVTY  ++ G C   +MD+A  +F  M  
Sbjct: 364 STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 423

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
               PNV  +  LI+G+ +I +  K + LL +M  + ++ D 
Sbjct: 424 KGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADT 465



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 71/170 (41%)

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           ++ AL  F  M        T  +   +  + K  +    + L   +       D+   N 
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LI+  C   RL  A  +   L +     D  T+N +I GLC +G++ +A  LF       
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             P+V+ + TL++G  ++   S  I LL  M +K   P+    + ++D L
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSL 300


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  301 bits (771), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 163/419 (38%), Positives = 235/419 (56%), Gaps = 54/419 (12%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN   YNTIID LCK+  V +A  LF +M  + I+PD+ TYNSLIH LC+  +W    
Sbjct: 197 CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVA 256

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+D  + P VV+FN ++D LCK GK+ EA  ++D M+QR V PN  TY+ LMDG 
Sbjct: 257 TLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGH 316

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV------------------- 172
           CL  +++ A ++F +M   GC  + +SYN LINGYCK + +                   
Sbjct: 317 CLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNM 376

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           +EA+ ++  MV KG  P V++YNTL  G  +I +++ A+ LF EM R ++  DT TY+T 
Sbjct: 377 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 436

Query: 233 IDG-----------------------------------LCKNGYIVEAVELFRTLGILKC 257
           I G                                   LCKN Y+ EA+ L + +     
Sbjct: 437 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 496

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           + DIQ  N  IDG+C++G LE A +LF +L  + L  DV TY+IMI+GLC  G +D+A  
Sbjct: 497 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 556

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           LF +M+EN    N  I+ T+  GF+R N+ S+ I+LL +M  +    DAS +++ V +L
Sbjct: 557 LFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML 615



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 197/379 (51%), Gaps = 19/379 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TV +N ++  + K        +L  QM    I P++ T + LI+  CH N    A  +
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G QP   TF  ++  +C  GK+ EA  L D M+    RP+  TY TL++G C 
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A  L GSM    C+ +  +YN +I+  CK+++V EA +L+ EMV+KGI P + T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L   L  + + +H   L  EM    +  D  ++NT +D LCK G + EA ++   + 
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E ++  Y  L+DG C    ++ A+++F ++  +  + +V++YN +I+G C   ++D
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358

Query: 314 KAHDL---------FLDMEE----------NAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           KA            +L+M+E              PNVI + TLI+G+ +I +  K + L 
Sbjct: 359 KAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLF 418

Query: 355 HKMKEKKVMPDASIVSMVV 373
            +M  ++++PD    S ++
Sbjct: 419 GEMCRQELIPDTVTYSTLI 437



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 84/229 (36%), Positives = 131/229 (57%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN ++YNT+I+G CK   +DKA  LF +M  + + PD VTY++LIHGLCH     +A 
Sbjct: 391 CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAI 450

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+     P++VT+ +++D LCKN  + EA  LL  +   ++ P+    +  +DG 
Sbjct: 451 ALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGM 510

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++  A +LF ++ S G + D  +Y+I+ING C+   ++EA  L+REM   G     
Sbjct: 511 CRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNG 570

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
             YNT+  G    ++   A++L +EM     +AD ST   F+  L  +G
Sbjct: 571 CIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 619



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 150/306 (49%), Gaps = 6/306 (1%)

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD---VRP 119
           H N  + A   F  M+     PS V FN ++  +    KM   S LL L  Q D   + P
Sbjct: 38  HFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSI---AKMKHHSTLLSLSHQMDSFGIPP 94

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           N +T   L++ FC   ++  A  +   +  +G + D  ++  LI G C   ++ EAL L+
Sbjct: 95  NIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLF 154

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            +M+ +G +P VVTY TL  GL ++     A++L   M + +   +   YNT ID LCK+
Sbjct: 155 DKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKD 214

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
             + EA  LF  +       DI  YN LI  LC     +    L   +    ++ DVV++
Sbjct: 215 RQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSF 274

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           N ++  LC +G++ +AHD+   M +  V PNV+ +  L+ G   +++  + +++   M  
Sbjct: 275 NTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVC 334

Query: 360 KKVMPD 365
           K  MP+
Sbjct: 335 KGCMPN 340



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 161/317 (50%), Gaps = 19/317 (5%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN------- 65
           +PN VTY  ++DG C    +D+A  +F  M  +   P+V++YN+LI+G C          
Sbjct: 303 EPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIH 362

Query: 66  ------------DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
                       + +EA ++F  M+ +G  P+V+++N +++  CK  ++D+A  L   M 
Sbjct: 363 YTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMC 422

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
           ++++ P+  TYSTL+ G C   ++  A  LF  M +     + V+Y IL++  CKN+ + 
Sbjct: 423 RQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLA 482

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           EA++L + +    + P +   N    G+    ++E A  LF  +    +  D  TY+  I
Sbjct: 483 EAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 542

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
           +GLC+ G + EA +LFR +    C L+   YN +  G  ++     A++L + +  R   
Sbjct: 543 NGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFS 602

Query: 294 ADVVTYNIMIHGLCNDG 310
           AD  T  + +  L +DG
Sbjct: 603 ADASTMTLFVKMLSDDG 619



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 118/240 (49%)

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           I+ A   F  M  M      V +N L+    K K     LSL  +M S GI P + T + 
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L      +++V  A  +  ++ +     DT+T+ T I G+C  G I EA+ LF  +    
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              D+  Y  LI+GLCK G    A+ L  S+ ++    +V  YN +I  LC D Q+ +A 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +LF +M    ++P++  + +LIH    + +   V  LL++M + K+MPD    + VVD L
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281



 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/185 (21%), Positives = 78/185 (42%)

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +++N         + ++ A+  F  M R      T  +N  +  + K  +    + L   
Sbjct: 27  LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       +I   + LI+  C   R+  A  +   + +     D  T+  +I G+C +G+
Sbjct: 87  MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGK 146

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + +A  LF  M      P+V+ + TLI+G  ++   S  I LL  M +K   P+    + 
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206

Query: 372 VVDLL 376
           ++D L
Sbjct: 207 IIDSL 211


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  299 bits (766), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 147/365 (40%), Positives = 226/365 (61%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ V Y +IID LCK+  V +A  LF QM G+ I+PD+ TY SL+H LC+  +W    
Sbjct: 192 CQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVT 251

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +M++  + P VV F+ ++D LCK GK+ EA  ++D+M+QR V P+  TY+TLMDG 
Sbjct: 252 TLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGH 311

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL  +++ A ++F  M   G   D +SY  LINGYCK  ++++A+ L+ EM  K   P  
Sbjct: 312 CLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDT 371

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYNTL  GL  + +++ A+ LF EM       D  TY+  +D LCKN ++ EA+ L + 
Sbjct: 372 KTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKA 431

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       DIQ YN +IDG+C++G LE A +LF +L  + L   V TYNIMIHGLC  G 
Sbjct: 432 IEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGL 491

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A+ LF++M+ N  +P+   + T+  GF++ N+  + I+LL +M  +    D S  ++
Sbjct: 492 LNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTL 551

Query: 372 VVDLL 376
           +V++L
Sbjct: 552 LVEML 556



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 184/363 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +  ++  + K        +L  QM    + P+V T N LI+  CH N    A  +
Sbjct: 54  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G QP   TF  ++  LC  GK+ EA  L D M+    +PN  TY TL++G C 
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A  L  SME   C+ D V Y  +I+  CK+++V EA +L+ +MV +GI P + T
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +L   L  + + +H   L  +M    +  D   ++T +D LCK G + EA E+   + 
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 293

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E D+  Y  L+DG C    ++ A+++F  + R+    DV++Y  +I+G C   ++D
Sbjct: 294 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 353

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA  LF +M      P+   + TL+HG   + +    I L H+M  +  MPD    S+++
Sbjct: 354 KAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 413

Query: 374 DLL 376
           D L
Sbjct: 414 DSL 416



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 162/297 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V ++T++D LCKEG V +A  +   M    + PDVVTY +L+ G C  ++ +EA ++
Sbjct: 264 PDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKV 323

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+ +G  P V+++  +++  CK  K+D+A  L + M +++  P+  TY+TLM G C 
Sbjct: 324 FDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCH 383

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A  LF  M + G   D V+Y+IL++  CKN  +EEA++L + + +  + P +  
Sbjct: 384 VGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQV 443

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  G+    ++E A  LF  +    +     TYN  I GLCK G + EA +LF  + 
Sbjct: 444 YNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMD 503

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
              C  D   YN +  G  ++     A++L   +  R   ADV T  +++  L +DG
Sbjct: 504 GNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 137/263 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTY T++DG C +  +D+A  +F  M  +   PDV++Y +LI+G C  +  ++A  
Sbjct: 298 EPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMY 357

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  +   P   T+N +M  LC  G++ +A  L   MV R   P+  TYS L+D  C
Sbjct: 358 LFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLC 417

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +  A  L  ++E+     D   YNI+I+G C+  E+E A  L+  + SKG+ P+V 
Sbjct: 418 KNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVW 477

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN +  GL +   +  A KLF EM  +D + D  TYNT   G  +N   + A++L   +
Sbjct: 478 TYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEM 537

Query: 253 GILKCELDIQAYNCLIDGLCKSG 275
                  D+     L++ L   G
Sbjct: 538 LARGFSADVSTTTLLVEMLSDDG 560



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 164/342 (47%), Gaps = 41/342 (11%)

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD---VRP 119
           H N  ++A   F  ++     PS+V F  ++  +    KM   S +L L  Q D   V P
Sbjct: 33  HFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSI---AKMKHYSTVLSLSTQMDSFGVPP 89

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           N +T + L++ FC   ++  A  +   +  +G + D  ++  LI G C   ++ EAL L+
Sbjct: 90  NVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLF 149

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            +M+ +G +P VVTY TL  GL ++     A++L   M++ +   D   Y + ID LCK+
Sbjct: 150 DKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKD 209

Query: 240 GYIVEAVELFRTL---GILK---------------CEL-----------------DIQAY 264
             + EA  LF  +   GI                 CE                  D+  +
Sbjct: 210 RQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIF 269

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
           + ++D LCK G++  A E+   + +R +  DVVTY  ++ G C   +MD+A  +F  M  
Sbjct: 270 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 329

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              AP+VI + TLI+G+ +I+K  K + L  +M  K+ +PD 
Sbjct: 330 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDT 371



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 131/273 (47%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D+A    + ++     P+   ++ L+         +    L   M+S G   +  + NI
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LIN +C    V  A S+  +++  G +P   T+ TL  GL    ++  AL LF++M  + 
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              +  TY T I+GLCK G    A+ L R++    C+ D+  Y  +ID LCK  ++  A 
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            LF  +  + +  D+ TY  ++H LCN  +      L   M  + + P+V+IF T++   
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +  K ++  E++  M ++ V PD    + ++D
Sbjct: 277 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMD 309



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 35/240 (14%)

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           +++ALS +  ++     P++V +  L   + ++      L L  +M    V  +  T N 
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            I+  C    +  A  +   +  L  + D   +  LI GLC  G++  AL LF  +    
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 292 LVADVVTYNIMIHG-----------------------------------LCNDGQMDKAH 316
              +VVTY  +I+G                                   LC D Q+ +A 
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +LF  M    ++P++  + +L+H    + +   V  LL++M   K++PD  I S VVD L
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 3/122 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN +I GLCK G +++A  LF++M G + +PD  TYN++  G    N+   A +L
Sbjct: 474 PSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQL 533

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+ +G    V T  ++++ L  +G +D++S  L L V  +     F +  + +GF L
Sbjct: 534 LEEMLARGFSADVSTTTLLVEMLSDDG-LDQSSCFLMLSVLSEDDRRYFIF--IPEGFDL 590

Query: 134 TG 135
            G
Sbjct: 591 LG 592


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  299 bits (765), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 146/362 (40%), Positives = 231/362 (63%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN + Y+++I+GLC+ G + +A  LF +M  + I  +V+TYNSLIH  C    W EA R 
Sbjct: 112 PNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRT 171

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+ +G+ P VVTF  ++D L K GK+ EA ++ +LM+++   PN  TY++L++G CL
Sbjct: 172 FSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCL 231

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +++ A  LF  M   G K D +SYN LINGYC + + EEA++L+R+M  + + P++ T
Sbjct: 232 HHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITT 291

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L   L++  ++  A +LF  MQ    +    TY   +DGLCKNG I EA+++FR+L 
Sbjct: 292 YTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLK 351

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +K +  I+ Y+ LI G+ ++ R E A+E+F  +P   LV ++VTYNIMI+GLC +G++ 
Sbjct: 352 SIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLL 411

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  LF+ MEE+    + I F  +I GF++ N+  K +E L +M+EK   P+ S+  M+V
Sbjct: 412 EAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLV 471

Query: 374 DL 375
           +L
Sbjct: 472 NL 473



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 191/361 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VT +T++ G+C EG V  A  LF +M       D++ Y  LI+ L        A  
Sbjct: 6   QPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVE 65

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+ +    +  T+ +++D LCK+G   +  ++   M+   + PN   YS+L++G C
Sbjct: 66  LHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLC 125

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A  LF  M S G K + ++YN LI+  C+    +EA   + +MV +GI P VV
Sbjct: 126 RVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVV 185

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+ TL   L +  +V+ A K+FE M +   A +  TYN+ ++GLC +  +  AV LF  +
Sbjct: 186 TFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVM 245

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                ++D+ +YN LI+G C SG+ E A+ LFR +    L   + TY I++  L  +G++
Sbjct: 246 VERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRI 305

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A +LF +M+    +P++  +  L+ G  +     + I++   +K  K  P   I S++
Sbjct: 306 RTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSIL 365

Query: 373 V 373
           +
Sbjct: 366 I 366



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 175/307 (57%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+ T+ID L K+G V +A  +F  M  +   P++VTYNSL++GLC  +  + A RL
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRL 241

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+++G++  V+++N +++  C +GK +EA  L   M   ++ P+  TY+ L+     
Sbjct: 242 FEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQ 301

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+I  A+ELF +M+  G      +Y +L++G CKN  +EEA+ ++R + S   KP++  
Sbjct: 302 NGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRI 361

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  G+F+  + E A+++F+E+    +  +  TYN  I+GLCK G ++EA  LF  + 
Sbjct: 362 YSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQME 421

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              CE D  ++N +I G  +  +++ A+E  + +  +    +     ++++    D Q  
Sbjct: 422 ESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAADAQSS 481

Query: 314 KAHDLFL 320
           +  + FL
Sbjct: 482 ELPNNFL 488



 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 162/302 (53%), Gaps = 6/302 (1%)

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           M  G QP++VT + ++  +C  GK+ +A  L D M +   + +   Y  L++    T + 
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
            RA EL   M S  C  +  +Y ++I+  CK+    + L ++REM++ GI P V+ Y++L
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GI 254
             GL  + ++  A+ LF+EM    + A+  TYN+ I   C+ G   EA   F  +   GI
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L    D+  +  LID L K G+++ A ++F  + ++    ++VTYN +++GLC   QMD 
Sbjct: 181 LP---DVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDH 237

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  LF  M E  +  +VI + TLI+G+    K  + + L  KM+ +++ P  +  ++++ 
Sbjct: 238 AVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLK 297

Query: 375 LL 376
            L
Sbjct: 298 AL 299


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  299 bits (765), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 151/364 (41%), Positives = 228/364 (62%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + N V YNTIIDGLCK   +D A  LF +M+ + I PDV TYNSLI  LC+   W++A R
Sbjct: 253 EANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASR 312

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+++ + P+VVTFN ++D   K GK+ EA +L D M+QR + PN  TY++L++GFC
Sbjct: 313 LLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 372

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  +++ A+++F  M S  C  D V+YN LI G+CK K VEE + L+REM  +G+    V
Sbjct: 373 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 432

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GLF+    + A K+F++M  D V  D  TY+  +DGLCK G + +A+ +F  L
Sbjct: 433 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 492

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K E +I  YN +I+G+CK+G++E   +LF SL  + +  +V+ Y  MI G C  G  
Sbjct: 493 QKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 552

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A  LF +M+E+   P+   + TLI   +R    +   EL+ +M+    + DAS +SMV
Sbjct: 553 EEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 612

Query: 373 VDLL 376
           +++L
Sbjct: 613 INML 616



 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 199/362 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT +++++G C    + +A AL  QM      PD VT+N+LIHGL   N  +EA  
Sbjct: 148 EPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVA 207

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+ +G QP + T+  +++ LCK G +D A  LL  M +  +  N   Y+T++DG C
Sbjct: 208 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLC 267

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               ++ A +LF  ME+ G K D  +YN LI+  C      +A  L  +M+ + I P VV
Sbjct: 268 KYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVV 327

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N+L     +  ++  A KLF+EM +  +  +  TYN+ I+G C +  + EA ++F  +
Sbjct: 328 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 387

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D+  YN LI G CK+ R+E  +ELFR + +R LV + VTYN +I GL   G  
Sbjct: 388 VSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 447

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  +F  M  + V P++I +  L+ G  +  K  K + +   +++ K+ P+    +++
Sbjct: 448 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIM 507

Query: 373 VD 374
           ++
Sbjct: 508 IE 509



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 178/330 (53%), Gaps = 3/330 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TYN++I  LC  G    A  L   M    INP+VVT+NSLI          EA++
Sbjct: 288 KPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEK 347

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM+ + + P++VT+N +++  C + ++DEA ++  LMV +D  P+  TY+TL+ GFC
Sbjct: 348 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFC 407

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++    ELF  M   G   + V+YN LI G  +  + + A  ++++MVS G+ P ++
Sbjct: 408 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 467

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L  GL +  ++E AL +FE +Q+  +  +  TYN  I+G+CK G + +  +LF +L
Sbjct: 468 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSL 527

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +   + ++  Y  +I G C+ G  E A  LFR +     + D   YN +I     DG  
Sbjct: 528 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDK 587

Query: 313 DKAHDLFLDMEENAV---APNVIIFVTLIH 339
             + +L  +M        A  + + + ++H
Sbjct: 588 AASAELIKEMRSCGFVGDASTISMVINMLH 617



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 182/347 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + ++ ++  + K    D   +L  QM+   I  +  TY+ L++  C  +    A  +
Sbjct: 79  PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAV 138

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +MM  G +P +VT + +++  C   ++ EA  L+D MV+   +P+  T++TL+ G  L
Sbjct: 139 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFL 198

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K + A  L   M + GC+ D  +Y  ++NG CK  +++ ALSL ++M    I+  VV 
Sbjct: 199 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVI 258

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+  GL +   ++ A  LF +M+   +  D  TYN+ I  LC  G   +A  L   + 
Sbjct: 259 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMI 318

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K   ++  +N LID   K G+L  A +LF  + +R +  ++VTYN +I+G C   ++D
Sbjct: 319 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 378

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +A  +F  M      P+V+ + TLI GF +  +  + +EL  +M ++
Sbjct: 379 EAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQR 425



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/298 (34%), Positives = 160/298 (53%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  LF EM+     PS++ F+ ++  + K  K D    L + M    +  N +TYS L
Sbjct: 63  DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++ FC   ++  A  + G M  +G + D V+ + L+NGYC  K + EA++L  +MV  G 
Sbjct: 123 LNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGY 182

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP  VT+NTL  GLF  ++   A+ L + M       D  TY T ++GLCK G I  A+ 
Sbjct: 183 KPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 242

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L + +   K E ++  YN +IDGLCK   ++ A +LF  +  + +  DV TYN +I  LC
Sbjct: 243 LLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLC 302

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           N G+   A  L  DM E  + PNV+ F +LI  F +  K  +  +L  +M ++ + P+
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 360



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 182/334 (54%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D A ALF +M      P ++ ++ L+  +   N ++    L  +M + G+  +  T+++
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C+  ++  A  +L  M++    P+  T S+L++G+C   +I+ A  L   M  MG
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            K D V++N LI+G   + +  EA++L   MV++G +P + TY T+  GL +   ++ AL
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 241

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            L ++M++  + A+   YNT IDGLCK  ++ +A +LF  +     + D+  YN LI  L
Sbjct: 242 SLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCL 301

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C  GR   A  L   +  R +  +VVT+N +I     +G++ +A  LF +M + ++ PN+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 361

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + + +LI+GF   ++  +  ++   M  K  +PD
Sbjct: 362 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 395



 Score =  154 bits (388), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 131/235 (55%), Gaps = 4/235 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYNT+I G CK   V++   LF +M    +  + VTYN+LI GL  A D + A+
Sbjct: 392 CLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 451

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++F +M+  GV P ++T+++++D LCK GK+++A  + + + +  + PN +TY+ +++G 
Sbjct: 452 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGM 511

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+    +LF S+   G K + + Y  +I+G+C+    EEA +L+REM   G  P  
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDS 571

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI----DGLCKNGYI 242
             YNTL            + +L +EM+      D ST +  I    DG  +  Y+
Sbjct: 572 GCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYL 626



 Score =  148 bits (373), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 148/285 (51%), Gaps = 4/285 (1%)

Query: 94  DELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
           ++L +NG    K+D+A  L   MV+    P+   +S L+       K +    L   M++
Sbjct: 50  EKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN 109

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
           +G  H+  +Y+IL+N +C+  ++  AL++  +M+  G +P +VT ++L  G     ++  
Sbjct: 110 LGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISE 169

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           A+ L ++M       DT T+NT I GL  +    EAV L   +    C+ D+  Y  +++
Sbjct: 170 AVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 229

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           GLCK G +++AL L + + +  + A+VV YN +I GLC    MD A DLF  ME   + P
Sbjct: 230 GLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 289

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +V  + +LI       + S    LL  M E+K+ P+    + ++D
Sbjct: 290 DVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLID 334


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  297 bits (760), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 153/364 (42%), Positives = 224/364 (61%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN V Y TIID LCK+  V+ A  L  +M    I PDVVTY++++HG C     NEA 
Sbjct: 228 CKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEAT 287

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+ + V P+ VTF +++D LCK G + EA  + + M ++   PNA+TY+ LMDG+
Sbjct: 288 ILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGY 347

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL  +++ A+++   M   GC     SYNILINGYCK + ++EA SL  EM  K + P  
Sbjct: 348 CLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDT 407

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+TL  GL ++ + + AL LF+EM    +  D  TY+T +DGLCK+G++ EA++L ++
Sbjct: 408 VTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKS 467

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   K E DI  YN LI+G+  +G+LE+A ELF  L    +   + TY IMI GL  +G 
Sbjct: 468 MQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGL 527

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D+A++LF  ME++   PN   +  +I GF++    S  I L+ +M  K+   D+S   M
Sbjct: 528 SDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQM 587

Query: 372 VVDL 375
           ++DL
Sbjct: 588 LLDL 591



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 194/362 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V +   +  + K+       +L  QM    +  +V + N LI+ LC  N    A  
Sbjct: 89  RPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAIS 148

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M   G+QP  +TFN +++  C  G++ EA  L + MV+R  +P+  +YST+++G C
Sbjct: 149 VLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLC 208

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G  + A +L   ME  GCK + V+Y  +I+  CK+  V +A+ L  EMV +GI P VV
Sbjct: 209 KSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVV 268

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+T+  G   +  +  A  LF EM   +V  +T T+   +DGLCK G + EA  +F  +
Sbjct: 269 TYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAM 328

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                E +   YN L+DG C + +++ A ++   +  +     V +YNI+I+G C   ++
Sbjct: 329 TKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRL 388

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A  L ++M E  + P+ + + TL+ G  ++ +P + + L  +M    ++PD    S +
Sbjct: 389 DEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTL 448

Query: 373 VD 374
           +D
Sbjct: 449 LD 450



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 113/360 (31%), Positives = 196/360 (54%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  + N +I+ LC+   V  A ++  +M    I PD +T+N+LI+G C   +  EA  LF
Sbjct: 126 NVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLF 185

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ +G QP V++++ +++ LCK+G    A +LL  M ++  +PN   Y+T++D  C  
Sbjct: 186 NEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKD 245

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
             +N A +L   M   G   D V+Y+ +++G+C    + EA  L+ EMV + + P  VT+
Sbjct: 246 TLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTF 305

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  GL +   V  A  +FE M +     +  TYN  +DG C N  + EA ++   +  
Sbjct: 306 TILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVD 365

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C   + +YN LI+G CK  RL+ A  L   +  + L  D VTY+ ++ GLC  G+  +
Sbjct: 366 KGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQE 425

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A +LF +M  + + P+++ + TL+ G  +     + ++LL  M+E K+ PD  + +++++
Sbjct: 426 ALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIE 485



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 106/302 (35%), Positives = 168/302 (55%), Gaps = 6/302 (1%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N  +G    PNTVT+  ++DGLCKEG V +A+ +F  M  +   P+  TYN+L+ G C  
Sbjct: 291 NEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLN 350

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
           N  +EA+++   M+D+G  P V ++N++++  CK  ++DEA  LL  M ++++ P+  TY
Sbjct: 351 NQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTY 410

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           STLM G C  G+   A  LF  M S G   D ++Y+ L++G CK+  ++EAL L + M  
Sbjct: 411 STLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQE 470

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
             I+P +V YN L  G+F   ++E A +LF ++  D +     TY   I GL K G   E
Sbjct: 471 SKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDE 530

Query: 245 AVELFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           A ELFR +   G L    +  +YN +I G  ++     A+ L   +  +   AD  T+ +
Sbjct: 531 AYELFRKMEDDGFLP---NSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQM 587

Query: 302 MI 303
           ++
Sbjct: 588 LL 589



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 148/297 (49%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A   F+ M+    +PSVV F   +  + K  +      L + M    V  N ++ + L
Sbjct: 74  DDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNIL 133

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++  C    +  A  + G M  +G + D +++N LING C   E++EA+ L+ EMV +G 
Sbjct: 134 INCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGH 193

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P V++Y+T+  GL +      AL+L  +M+      +   Y T ID LCK+  + +A++
Sbjct: 194 QPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMD 253

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +       D+  Y+ ++ G C  G L  A  LF  +  R ++ + VT+ I++ GLC
Sbjct: 254 LLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLC 313

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            +G + +A  +F  M +    PN   +  L+ G+   N+  +  ++L  M +K   P
Sbjct: 314 KEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAP 370



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 139/274 (50%)

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
            +D+A      M++ + RP+   +   +       + +    L   M+  G  H+  S N
Sbjct: 72  SIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 131

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           ILIN  C+   V  A+S+  +M   GI+P  +T+NTL  G     +++ A+ LF EM R 
Sbjct: 132 ILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRR 191

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
               D  +Y+T I+GLCK+G    A++L R +    C+ ++ AY  +ID LCK   +  A
Sbjct: 192 GHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDA 251

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           ++L   +  R +  DVVTY+ ++HG C+ G +++A  LF +M    V PN + F  L+ G
Sbjct: 252 MDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDG 311

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +    S+   +   M +K   P+A   + ++D
Sbjct: 312 LCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMD 345



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 82/171 (47%)

Query: 206 QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYN 265
            ++ AL  F  M R +       +  F+  + K       V L   + +     ++ + N
Sbjct: 72  SIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 131

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
            LI+ LC+   +  A+ +   + +  +  D +T+N +I+G C +G++ +A  LF +M   
Sbjct: 132 ILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRR 191

Query: 326 AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              P+VI + T+I+G  +    S  ++LL KM+EK   P+    + ++D L
Sbjct: 192 GHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSL 242


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  296 bits (759), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 151/369 (40%), Positives = 225/369 (60%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           IG   +PN VTY T+I+GLCK+  V +A  +F +M  + I+P++VTYNSLIHGLC   +W
Sbjct: 142 IGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEW 201

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
                L  EM+D  + P V T N ++D LCK G + EA  ++D+M+ R V PN  TY+ L
Sbjct: 202 KHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNAL 261

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           MDG CL  +++ A ++F +M    C  + +SYN LINGYCK + V++A+ L+ EM  + +
Sbjct: 262 MDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 321

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P  VTYNTL  GL  + +++ A+ LF EM       D  TY T  D LCKN ++ +A+ 
Sbjct: 322 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 381

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L + +     + DIQ Y  ++DG+C++G LE A +LF +L  + L  +V TYNIMIHGLC
Sbjct: 382 LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 441

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G + +A  LF +M +N  +PN   +  +  GF+R N+  + IELL +M  +    D S
Sbjct: 442 KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVS 501

Query: 368 IVSMVVDLL 376
             +++V +L
Sbjct: 502 TTTLLVGML 510



 Score =  258 bits (660), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 194/318 (61%), Gaps = 13/318 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTY T+++GLCK             M  + I+PD+ TYNSLIH LC+  +W     
Sbjct: 648 QPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIHALCNLCEWKHVTT 694

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM++  + P+VV F+ ++D LCK G +  A  ++D+M++R V P+  TY+ LMDG C
Sbjct: 695 LLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHC 754

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L  +++ A ++F +M   GC  +  SYNILINGYC+ + +++A+ L  +M  +G+    V
Sbjct: 755 LRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTV 814

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GL  + +++HA+ LF EM       D  TY   +D LCKN ++ EA+ L + +
Sbjct: 815 TYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAI 874

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + DI  YN  IDG+C++G LE A +LF +L  + L  DV TYNIMIHGLC  G +
Sbjct: 875 EGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLL 934

Query: 313 DKAHDLFLDMEENAVAPN 330
           D+A+ LF  M+EN +  N
Sbjct: 935 DEANKLFRKMDENDIWSN 952



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 188/345 (54%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D+A + F +M  +   P  V +N L+  +      +    L  +M   G+ P V T  +
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++ LC   ++D A   L  +++   +P+A T++TL+ G C+ GKI  A  LF  M   G
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + + V+Y  LING CK+++V EA +++ EM++KGI P +VTYN+L  GL ++ + +H  
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            L  EM    +  D  T NT +D LCK G + EA ++   +     E ++  YN L+DG 
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C    +++A+++F ++  +  VA+V++YN +I+G C    +DKA  LF +M    + PN 
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 325

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + + TLIHG   + +    I L H+M  +  +PD      + D L
Sbjct: 326 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYL 370



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 185/354 (52%), Gaps = 13/354 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T N +I+  C    +  A ++  ++      PDVVTY +L++GLC           
Sbjct: 614 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC----------- 662

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+ +G+ P + T+N ++  LC   +    + LL+ MV   + PN   +ST++D  C 
Sbjct: 663 --KMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 720

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G I  A ++   M   G + D V+Y  L++G+C   E++EA+ ++  MV KG  P V +
Sbjct: 721 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 780

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +I +++ A+ L E+M    + ADT TYNT I GLC  G +  A+ LF  + 
Sbjct: 781 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 840

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+  Y  L+D LCK+  L  A+ L +++    L AD++ YNI I G+C  G+++
Sbjct: 841 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELE 900

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            A DLF ++    + P+V  +  +IHG  +     +  +L  KM E  +  +++
Sbjct: 901 AARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNST 954



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 193/433 (44%), Gaps = 68/433 (15%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N ++YNT+I+G CK   VDKA  LF +M  + + P+ VTYN+LIHGLCH     +A 
Sbjct: 286 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 345

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+ +G  P +VT+  + D LCKN  +D+A  LL  +   +  P+   Y+T++DG 
Sbjct: 346 SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 405

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++  A +LF ++ S G + +  +YNI+I+G CK   + EA  L+ EM   G  P  
Sbjct: 406 CRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPND 465

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI-----DG--------LCK 238
            TYN +  G    ++    ++L EEM     + D ST    +     DG        LCK
Sbjct: 466 CTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCK 525

Query: 239 -------NGYIVEAV-ELFRTLGILKCELDIQAYNCLIDGLCKSGRL------------- 277
                  +G  + ++  LF +            +N L D L    R+             
Sbjct: 526 PSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFT 585

Query: 278 ------------EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL----- 320
                          L L   +    +  DV T NI+I+  C+  ++  A  +       
Sbjct: 586 KLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKL 645

Query: 321 -----------------DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
                             M    ++P++  + +LIH    + +   V  LL++M   K+M
Sbjct: 646 GFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIM 705

Query: 364 PDASIVSMVVDLL 376
           P+  + S VVD L
Sbjct: 706 PNVVVFSTVVDAL 718



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 156/297 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T NT++D LCKEG V +A  +   M    + P+VVTYN+L+ G C  N+ + A ++
Sbjct: 218 PDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKV 277

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+ +    +V+++N +++  CK   +D+A  L + M ++++ PN  TY+TL+ G C 
Sbjct: 278 FDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCH 337

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A  LF  M + G   D V+Y  L +  CKN+ +++A++L + +      P +  
Sbjct: 338 VGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 397

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y T+  G+    ++E A  LF  +    +  +  TYN  I GLCK G + EA +LF  + 
Sbjct: 398 YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMN 457

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
              C  +   YN +  G  ++      +EL   +  R    DV T  +++  L +DG
Sbjct: 458 KNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 514



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 151/317 (47%), Gaps = 19/317 (5%)

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD---VRP 119
           H N  ++A   F  M+     PS V F  ++  +    KM   S +L L  Q D   + P
Sbjct: 558 HFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSI---AKMKHYSTVLSLSTQMDSFGIPP 614

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           + +T + L++ FC   ++  A  +   +  +G + D V+Y  L+NG CK           
Sbjct: 615 DVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK----------- 663

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
             M++KGI P + TYN+L   L  + + +H   L  EM    +  +   ++T +D LCK 
Sbjct: 664 --MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKE 721

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G I  A ++   +     E D+  Y  L+DG C    ++ A+++F ++  +  V +V +Y
Sbjct: 722 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 781

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           NI+I+G C   +MDKA  L   M    +  + + + TLIHG   + +    I L H+M  
Sbjct: 782 NILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 841

Query: 360 KKVMPDASIVSMVVDLL 376
              +PD     +++D L
Sbjct: 842 SGQIPDLVTYRILLDYL 858



 Score =  144 bits (363), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 169/343 (49%), Gaps = 13/343 (3%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D A + F +M   +  P  V +  L+  +     ++    L  +M   G+ P V T N+
Sbjct: 562 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 621

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C   ++  A  +L  +++   +P+  TY TLM+G C              M + G
Sbjct: 622 LINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC-------------KMITKG 668

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
              D  +YN LI+  C   E +   +L  EMV+  I P VV ++T+   L +   +  A 
Sbjct: 669 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAH 728

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            + + M +  V  D  TY   +DG C    + EAV++F T+    C  ++++YN LI+G 
Sbjct: 729 DVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGY 788

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C+  R++ A+ L   +  + L+AD VTYN +IHGLC+ G++  A  LF +M  +   P++
Sbjct: 789 CQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDL 848

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + +  L+    + +  ++ + LL  ++   +  D  + ++ +D
Sbjct: 849 VTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAID 891



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 101/171 (59%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  +YN +I+G C+   +DKA  L  QM  + +  D VTYN+LIHGLCH      A 
Sbjct: 774 CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAI 833

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+  G  P +VT+ +++D LCKN  + EA  LL  +   ++  +   Y+  +DG 
Sbjct: 834 ALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGM 893

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           C  G++  A +LF ++ S G + D  +YNI+I+G CK   ++EA  L+R+M
Sbjct: 894 CRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 944



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 133/250 (53%), Gaps = 35/250 (14%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V ++T++D LCKEG +  A  +   M    + PDVVTY +L+ G C  ++ +EA ++
Sbjct: 706 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKV 765

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+ +G  P+V ++N++++  C+  +MD+A  LL+ M  + +  +  TY+TL+ G C 
Sbjct: 766 FDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCH 825

Query: 134 TGKINRAEELFGSMESMG---------------CKH--------------------DDVS 158
            G++  A  LF  M + G               CK+                    D + 
Sbjct: 826 VGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILV 885

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YNI I+G C+  E+E A  L+  + SKG++P V TYN +  GL +   ++ A KLF +M 
Sbjct: 886 YNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMD 945

Query: 219 RDDVAADTST 228
            +D+ +++++
Sbjct: 946 ENDIWSNSTS 955



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 73/173 (42%)

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           ++NT        + ++ AL  F  M        T  +N  +  + K  +    + L R +
Sbjct: 12  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 71

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D+     +I+ LC   R++ A      + +     D  T+  +I GLC +G++
Sbjct: 72  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 131

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +A  LF  M      PNV+ + TLI+G  +  + ++   +  +M  K + P+
Sbjct: 132 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPN 184


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  296 bits (758), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 150/364 (41%), Positives = 228/364 (62%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + + V YNTIIDGLCK   +D A ALF +M+ + I PDV TYNSLI  LC+   W++A R
Sbjct: 252 EADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASR 311

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+++ + P+VVTF+ ++D   K GK+ EA +L D M++R + P+ FTYS+L++GFC
Sbjct: 312 LLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  +++ A+ +F  M S  C  + V+YN LI G+CK K VEE + L+REM  +G+    V
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GLF+    + A K+F++M  D V  D  TY+  +DGLCK G + +A+ +F  L
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K E DI  YN +I+G+CK+G++E   +LF SL  + +  +V+ Y  MI G C  G  
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A  LF +M+E+   P+   + TLI   +R    +   EL+ +M+    + DAS +SMV
Sbjct: 552 EEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611

Query: 373 VDLL 376
           +++L
Sbjct: 612 INML 615



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 196/362 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT +++++G C    +  A AL  QM      PD VT+N+LIHGL   N  +EA  
Sbjct: 147 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVA 206

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ +G QP +VT+  +++ LCK G +D A  LL  M +  +  +   Y+T++DG C
Sbjct: 207 LVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 266

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               I+ A  LF  ME+ G + D  +YN LI+  C      +A  L   M+ + I P VV
Sbjct: 267 KYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVV 326

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++ L     +  ++  A KL++EM +  +  D  TY++ I+G C +  + EA  +F  +
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  ++  YN LI G CK+ R+E  +ELFR + +R LV + VTYN +I GL   G  
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  +F  M  + V P++I +  L+ G  +  K  K + +   +++ K+ PD    +++
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506

Query: 373 VD 374
           ++
Sbjct: 507 IE 508



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 184/347 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +N ++  + K    D   +L  +M+   I+ D+ +YN LI+  C  +    A  +
Sbjct: 78  PSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +MM  G +P +VT + +++  C + ++ +A  L+D MV+   +P+  T++TL+ G  L
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFL 197

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K + A  L   M   GC+ D V+Y  ++NG CK  +++ ALSL ++M    I+  VV 
Sbjct: 198 HNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+  GL +   ++ A  LF +M+   +  D  TYN+ I  LC  G   +A  L   + 
Sbjct: 258 YNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMI 317

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K   ++  ++ LID   K G+L  A +L+  + +R +  D+ TY+ +I+G C   ++D
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +A  +F  M      PNV+ + TLI GF +  +  + +EL  +M ++
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR 424



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 165/307 (53%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  LF EM+     PS+V FN ++  + K  K D    L + M    +  + ++Y+ L
Sbjct: 62  DDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNIL 121

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++ FC   ++  A  + G M  +G + D V+ + L+NGYC +K + +A++L  +MV  G 
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 181

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP  VT+NTL  GLF  ++   A+ L ++M +     D  TY   ++GLCK G I  A+ 
Sbjct: 182 KPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALS 241

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L + +   K E D+  YN +IDGLCK   ++ A  LF  +  + +  DV TYN +I  LC
Sbjct: 242 LLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLC 301

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           N G+   A  L  +M E  + PNV+ F  LI  FV+  K  +  +L  +M ++ + PD  
Sbjct: 302 NYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361

Query: 368 IVSMVVD 374
             S +++
Sbjct: 362 TYSSLIN 368



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 175/334 (52%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D A  LF +M      P +V +N L+  +     ++    L   M +  +   + ++N+
Sbjct: 61  LDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C+  ++  A  +L  M++    P+  T S+L++G+C + +I+ A  L   M  MG
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            K D V++N LI+G   + +  EA++L  +MV +G +P +VTY  +  GL +   ++ AL
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            L ++M++  + AD   YNT IDGLCK  +I +A  LF  +       D+  YN LI  L
Sbjct: 241 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCL 300

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C  GR   A  L  ++  R +  +VVT++ +I     +G++ +A  L+ +M + ++ P++
Sbjct: 301 CNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             + +LI+GF   ++  +   +   M  K   P+
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 131/235 (55%), Gaps = 4/235 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYNT+I G CK   V++   LF +M    +  + VTYN+LI GL  A D + A+
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++F +M+  GV P ++T+++++D LCK GK+++A  + + + +  + P+ +TY+ +++G 
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+    +LF S+   G K + + Y  +I+G+C+    EEA +L+REM   G  P  
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDS 570

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI----DGLCKNGYI 242
             YNTL            + +L +EM+      D ST +  I    DG  +  Y+
Sbjct: 571 GCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYL 625



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 129/290 (44%), Gaps = 40/290 (13%)

Query: 80  QGVQPSVVTFNVIMDELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
           +GV  S  +++   ++L +N     K+D+A  L   MVQ    P+   ++ L+       
Sbjct: 36  RGVYFSAASYDY-REKLSRNALLNLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMK 94

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           K +    L   M+++   +D  SYNILIN +C+  ++  AL++  +M+  G +P +VT +
Sbjct: 95  KFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLS 154

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
                                              + ++G C +  I +AV L   +  +
Sbjct: 155 -----------------------------------SLLNGYCHSKRISDAVALVDQMVEM 179

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
             + D   +N LI GL    +   A+ L   + +R    D+VTY  +++GLC  G +D A
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             L   ME+  +  +V+I+ T+I G  +         L +KM+ K + PD
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPD 289


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  296 bits (757), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 148/365 (40%), Positives = 223/365 (61%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN V ++T+ID LCK+  V +A  +F +M  + I+P++VTYNSLIHGLC   +W    
Sbjct: 206 CQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 265

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+D  + P V T N ++D LCK G + EA  ++D+M+ R V PN  TY+ LMDG 
Sbjct: 266 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 325

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL  +++ A ++F +M    C  + +SYN LINGYCK + V++A+ L+ EM  + + P  
Sbjct: 326 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 385

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  GL  + +++ A+ LF EM       D  TY T  D LCKN ++ +A+ L + 
Sbjct: 386 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 445

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DIQ Y  ++DG+C++G LE A +LF +L  + L  +V TYNIMIHGLC  G 
Sbjct: 446 IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 505

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + +A  LF +M +N  +PN   +  +  GF+R N+  + IELL +M  +    D S  ++
Sbjct: 506 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTL 565

Query: 372 VVDLL 376
           +V +L
Sbjct: 566 LVGML 570



 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 122/363 (33%), Positives = 195/363 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TV +N ++  + K        +L  QM    I PDV T   +I+ LCH N  + A   
Sbjct: 68  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G QP   TF  ++  LC  GK+ EA  L D M+    +PN  TY TL++G C 
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A  L  SME   C+ + V ++ LI+  CK+++V EA +++ EM++KGI P +VT
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L  GL ++ + +H   L  EM    +  D  T NT +D LCK G + EA ++   + 
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E ++  YN L+DG C    +++A+++F ++  +  VA+V++YN +I+G C    +D
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA  LF +M    + PN + + TLIHG   + +    I L H+M  +  +PD      + 
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427

Query: 374 DLL 376
           D L
Sbjct: 428 DYL 430



 Score =  167 bits (422), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 156/297 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T NT++D LCKEG V +A  +   M    + P+VVTYN+L+ G C  N+ + A ++
Sbjct: 278 PDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKV 337

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+ +    +V+++N +++  CK   +D+A  L + M ++++ PN  TY+TL+ G C 
Sbjct: 338 FDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCH 397

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A  LF  M + G   D V+Y  L +  CKN+ +++A++L + +      P +  
Sbjct: 398 VGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 457

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y T+  G+    ++E A  LF  +    +  +  TYN  I GLCK G + EA +LF  + 
Sbjct: 458 YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMN 517

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
              C  +   YN +  G  ++      +EL   +  R    DV T  +++  L +DG
Sbjct: 518 KNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 128/229 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N ++YNT+I+G CK   VDKA  LF +M  + + P+ VTYN+LIHGLCH     +A 
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+ +G  P +VT+  + D LCKN  +D+A  LL  +   +  P+   Y+T++DG 
Sbjct: 406 SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 465

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++  A +LF ++ S G + +  +YNI+I+G CK   + EA  L+ EM   G  P  
Sbjct: 466 CRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPND 525

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            TYN +  G    ++    ++L EEM     + D ST    +  L  +G
Sbjct: 526 CTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 149/311 (47%), Gaps = 6/311 (1%)

Query: 53  TYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM 112
           ++N+      H N  +EA   F  M+ +   PS V FN ++  +    K    S LL L 
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSI---AKTKHHSTLLSLS 93

Query: 113 VQRD---VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
            Q D   + P+ +T + +++  C   +++ A      +  +G + D  ++  LI G C  
Sbjct: 94  RQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVE 153

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
            ++ EAL L+ +M+ +G +P VVTY TL  GL ++     A++L   M++ +   +   +
Sbjct: 154 GKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVF 213

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           +T ID LCK+  + EA  +F  +       +I  YN LI GLCK    +    L   +  
Sbjct: 214 STLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD 273

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
             ++ DV T N ++  LC +G + +AHD+   M    V PNV+ +  L+ G    N+   
Sbjct: 274 SKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDV 333

Query: 350 VIELLHKMKEK 360
            +++   M  K
Sbjct: 334 AVKVFDTMVHK 344



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 131/273 (47%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +DEA    + M+ +   P+   ++ L+     T   +    L   M+S G   D  +  I
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           +IN  C    V+ A S   +++  G +P   T+ TL  GL    ++  AL LF++M  + 
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              +  TY T I+GLCK G    A+ L R++    C+ ++  ++ LID LCK  ++  A 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            +F  +  + +  ++VTYN +IHGLC   +      L  +M ++ + P+V    T++   
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +    ++  +++  M  + V P+    + ++D
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMD 323



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 79/184 (42%)

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           ++NT        + ++ AL  F  M        T  +N  +  + K  +    + L R +
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D+     +I+ LC   R++ A      + +     D  T+  +I GLC +G++
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  LF  M      PNV+ + TLI+G  ++   S  I LL  M++    P+  + S +
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 373 VDLL 376
           +D L
Sbjct: 217 IDSL 220


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  295 bits (756), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 148/365 (40%), Positives = 223/365 (61%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN V ++T+ID LCK+  V +A  +F +M  + I+P++VTYNSLIHGLC   +W    
Sbjct: 206 CQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 265

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+D  + P V T N ++D LCK G + EA  ++D+M+ R V PN  TY+ LMDG 
Sbjct: 266 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 325

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL  +++ A ++F +M    C  + +SYN LINGYCK + V++A+ L+ EM  + + P  
Sbjct: 326 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 385

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  GL  + +++ A+ LF EM       D  TY T  D LCKN ++ +A+ L + 
Sbjct: 386 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 445

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DIQ Y  ++DG+C++G LE A +LF +L  + L  +V TYNIMIHGLC  G 
Sbjct: 446 IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 505

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + +A  LF +M +N  +PN   +  +  GF+R N+  + IELL +M  +    D S  ++
Sbjct: 506 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTL 565

Query: 372 VVDLL 376
           +V +L
Sbjct: 566 LVGML 570



 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 122/363 (33%), Positives = 195/363 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TV +N ++  + K        +L  QM    I PDV T   +I+ LCH N  + A   
Sbjct: 68  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G QP   TF  ++  LC  GK+ EA  L D M+    +PN  TY TL++G C 
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A  L  SME   C+ + V ++ LI+  CK+++V EA +++ EM++KGI P +VT
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L  GL ++ + +H   L  EM    +  D  T NT +D LCK G + EA ++   + 
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E ++  YN L+DG C    +++A+++F ++  +  VA+V++YN +I+G C    +D
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA  LF +M    + PN + + TLIHG   + +    I L H+M  +  +PD      + 
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427

Query: 374 DLL 376
           D L
Sbjct: 428 DYL 430



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 156/297 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T NT++D LCKEG V +A  +   M    + P+VVTYN+L+ G C  N+ + A ++
Sbjct: 278 PDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKV 337

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+ +    +V+++N +++  CK   +D+A  L + M ++++ PN  TY+TL+ G C 
Sbjct: 338 FDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCH 397

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A  LF  M + G   D V+Y  L +  CKN+ +++A++L + +      P +  
Sbjct: 398 VGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 457

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y T+  G+    ++E A  LF  +    +  +  TYN  I GLCK G + EA +LF  + 
Sbjct: 458 YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMN 517

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
              C  +   YN +  G  ++      +EL   +  R    DV T  +++  L +DG
Sbjct: 518 KNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 128/229 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N ++YNT+I+G CK   VDKA  LF +M  + + P+ VTYN+LIHGLCH     +A 
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+ +G  P +VT+  + D LCKN  +D+A  LL  +   +  P+   Y+T++DG 
Sbjct: 406 SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 465

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++  A +LF ++ S G + +  +YNI+I+G CK   + EA  L+ EM   G  P  
Sbjct: 466 CRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPND 525

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            TYN +  G    ++    ++L EEM     + D ST    +  L  +G
Sbjct: 526 CTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 149/311 (47%), Gaps = 6/311 (1%)

Query: 53  TYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM 112
           ++N+      H N  +EA   F  M+ +   PS V FN ++  +    K    S LL L 
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSI---AKTKHHSTLLSLS 93

Query: 113 VQRD---VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
            Q D   + P+ +T + +++  C   +++ A      +  +G + D  ++  LI G C  
Sbjct: 94  RQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVE 153

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
            ++ EAL L+ +M+ +G +P VVTY TL  GL ++     A++L   M++ +   +   +
Sbjct: 154 GKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVF 213

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           +T ID LCK+  + EA  +F  +       +I  YN LI GLCK    +    L   +  
Sbjct: 214 STLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD 273

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
             ++ DV T N ++  LC +G + +AHD+   M    V PNV+ +  L+ G    N+   
Sbjct: 274 SKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDV 333

Query: 350 VIELLHKMKEK 360
            +++   M  K
Sbjct: 334 AVKVFDTMVHK 344



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 131/273 (47%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +DEA    + M+ +   P+   ++ L+     T   +    L   M+S G   D  +  I
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           +IN  C    V+ A S   +++  G +P   T+ TL  GL    ++  AL LF++M  + 
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              +  TY T I+GLCK G    A+ L R++    C+ ++  ++ LID LCK  ++  A 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            +F  +  + +  ++VTYN +IHGLC   +      L  +M ++ + P+V    T++   
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +    ++  +++  M  + V P+    + ++D
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMD 323



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 79/184 (42%)

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           ++NT        + ++ AL  F  M        T  +N  +  + K  +    + L R +
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D+     +I+ LC   R++ A      + +     D  T+  +I GLC +G++
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  LF  M      PNV+ + TLI+G  ++   S  I LL  M++    P+  + S +
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 373 VDLL 376
           +D L
Sbjct: 217 IDSL 220



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 50/102 (49%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TYN +I GLCK+G + +A  LF +M     +P+  TYN +  G    N+      
Sbjct: 487 QPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIE 546

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
           L  EM+ +G    V T  +++  L  +G      ++L   VQ
Sbjct: 547 LLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKYVQ 588


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  294 bits (753), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 149/363 (41%), Positives = 221/363 (60%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTYNTIID LCK+  V++A     +M    I PDVVTYN+++HG C     NEA R
Sbjct: 233 KPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATR 292

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM+ + V P  VTFN+++D LCK G + EA  + + M ++   PNA+TY+ LMDG+C
Sbjct: 293 LFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYC 352

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L  +++ A ++ G M   GC  +  SYNILINGYCK+K + EA  L  EM  K + P  V
Sbjct: 353 LHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTV 412

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+TL  GL ++ +   AL LF+EM    +  D   Y+  +DG CK+G++ EA++L + +
Sbjct: 413 TYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEM 472

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + + +I  Y  LI G+  +G+LE+A ELF  L    +  D+ TYN+MI GL  +G  
Sbjct: 473 HERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLS 532

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A++ F  ME++   P+   +  +I GF++    S  I+L+ +M  K+   D+S   M+
Sbjct: 533 DEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQML 592

Query: 373 VDL 375
           +DL
Sbjct: 593 LDL 595



 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 199/359 (55%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  + N +I+ LC+   VD A ++  +M    I PD +T+N+LI+GLC+     EA  LF
Sbjct: 130 NVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLF 189

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+  G +P+V+++N +++ LCKNG    A R+   M Q   +PN  TY+T++D  C  
Sbjct: 190 NEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKD 249

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
             +N A E    M   G   D V+YN +++G+C   ++ EA  L++EMV + + P  VT+
Sbjct: 250 RLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTF 309

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L  GL +   V  A  + E M       +  TYN  +DG C +  + EA+++   +  
Sbjct: 310 NILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIG 369

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C  ++ +YN LI+G CKS R+  A  L   +  + L  D VTY+ ++ GLC  G+  +
Sbjct: 370 KGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPRE 429

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A +LF +M  + + P+++ +  L+ GF +     + ++LL +M E+++ P+  + ++++
Sbjct: 430 ALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILI 488



 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 196/362 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V +   +  + K+     A +L  QM    +  +V + N LI+ LC  +  + A  
Sbjct: 93  RPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVS 152

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M   G+QP  +TFN +++ LC  GK+ EA  L + MV     PN  +Y+T+++G C
Sbjct: 153 VMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLC 212

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G    A  +F  ME    K + V+YN +I+  CK++ V EA+    EMV +GI P VV
Sbjct: 213 KNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVV 272

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNT+  G   + Q+  A +LF+EM   +V  DT T+N  +DGLCK G + EA  +  T+
Sbjct: 273 TYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETM 332

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                E +   YN L+DG C   +++ A+++   +  +    ++ +YNI+I+G C   +M
Sbjct: 333 TEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRM 392

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A  L  +M E  + P+ + + TL+ G  ++ +P + + L  +M    ++PD    S++
Sbjct: 393 NEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSIL 452

Query: 373 VD 374
           +D
Sbjct: 453 LD 454



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 173/299 (57%), Gaps = 6/299 (2%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G    P+TVT+N ++DGLCKEG V +A+ +   M  +   P+  TYN+L+ G C  N  
Sbjct: 298 VGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQM 357

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +EA ++   M+ +G  P++ ++N++++  CK+ +M+EA RLL  M ++++ P+  TYSTL
Sbjct: 358 DEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTL 417

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           M G C  G+   A  LF  M S G   D ++Y+IL++G+CK+  ++EAL L +EM  + I
Sbjct: 418 MQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRI 477

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP ++ Y  L  G+F   ++E A +LF ++  D +  D  TYN  I GL K G   EA E
Sbjct: 478 KPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYE 537

Query: 248 LFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
            FR +   G L    D  +YN +I G  ++     A++L   +  +   AD  T+ +++
Sbjct: 538 FFRKMEDDGFLP---DSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 130/227 (57%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           IG  C PN  +YN +I+G CK   +++AK L  +M  +N+ PD VTY++L+ GLC     
Sbjct: 368 IGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRP 427

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA  LF EM   G+ P ++ +++++D  CK+G +DEA +LL  M +R ++PN   Y+ L
Sbjct: 428 REALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTIL 487

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G  + GK+  A+ELF  + + G + D  +YN++I G  K    +EA   +R+M   G 
Sbjct: 488 IRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGF 547

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
            P   +YN +  G  +      A++L +EM     +AD+ST+   +D
Sbjct: 548 LPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594



 Score =  164 bits (414), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 162/307 (52%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A   F+ M+    +PSVV F   +  + K  +   A  L + M    V  N ++ + L
Sbjct: 78  DDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVL 137

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++  C    ++ A  + G M  +G + D +++N LING C   +++EA+ L+ EMV  G 
Sbjct: 138 INCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGH 197

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P V++YNT+  GL +      A+++F +M+++    +  TYNT ID LCK+  + EAVE
Sbjct: 198 EPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVE 257

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
               +       D+  YN ++ G C  G+L  A  LF+ +  R ++ D VT+NI++ GLC
Sbjct: 258 FLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLC 317

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            +G + +A  +   M E    PN   +  L+ G+   N+  + I++L  M  K   P+ S
Sbjct: 318 KEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLS 377

Query: 368 IVSMVVD 374
             +++++
Sbjct: 378 SYNILIN 384



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 142/273 (52%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D+A      MV+ + RP+   +   +       + + A  L   M+  G  H+  S N+
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LIN  C+   V+ A+S+  +M   GI+P  +T+NTL  GL    +++ A+ LF EM    
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              +  +YNT I+GLCKNG  + AV +FR +   + + ++  YN +ID LCK   +  A+
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           E    +  R +  DVVTYN ++HG C+ GQ+++A  LF +M    V P+ + F  L+ G 
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +    S+   +   M EK   P+A   + ++D
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMD 349



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 84/171 (49%)

Query: 206 QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYN 265
            ++ AL  F  M R +       +  F+  + K      AV L   + +     ++ + N
Sbjct: 76  SIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLN 135

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
            LI+ LC+   ++ A+ +   + +  +  D +T+N +I+GLCN+G++ +A  LF +M  +
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195

Query: 326 AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              PNVI + T+I+G  +       + +  KM++ +  P+    + ++D L
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSL 246


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  293 bits (749), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 147/365 (40%), Positives = 226/365 (61%), Gaps = 2/365 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE G  C+P+ VTY+TIID LCK+  V++A  +F  MK + I+P++ TYNSLI GLC+ +
Sbjct: 254 GEAG--CQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFS 311

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            W EA  +  EMM   + P++VTF+++++  CK G + EA  +L  M +  V PN  TYS
Sbjct: 312 RWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYS 371

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           +LM+G+ L  ++  A +LF  M + GCK D  SYNILINGYCK K + EA  L+ EM+ +
Sbjct: 372 SLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQ 431

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G+ P +V+YNTL  GL ++ ++  A  LF+ M  +    D  TY+  +DG CK GY+ +A
Sbjct: 432 GLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKA 491

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             LFR +     + ++  YN LID +CKS  L+ A +LF  L  + L  +V  Y  +I+G
Sbjct: 492 FRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIING 551

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC +G +D+A + F +MEE+   PN   +  +I GF++    S+ ++L+ +M+EK  + D
Sbjct: 552 LCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVAD 611

Query: 366 ASIVS 370
            +  +
Sbjct: 612 VATTA 616



 Score =  224 bits (570), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 124/360 (34%), Positives = 198/360 (55%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VT+NT+I+GLCK G   +A  LF  M      PDV TY ++I+GLC   +   A  LF +
Sbjct: 193 VTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRK 252

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M + G QP VVT++ I+D LCK+ +++EA  +   M  + + PN FTY++L+ G C   +
Sbjct: 253 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 312

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
              A  +   M S+    + V++++LIN +CK   V EA  + + M   G++P VVTY++
Sbjct: 313 WREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSS 372

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G     +V  A KLF+ M       D  +YN  I+G CK   I EA +LF  +    
Sbjct: 373 LMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG 432

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              DI +YN LIDGLC+ GRL  A +LF+++     + D+ TY+I++ G C  G + KA 
Sbjct: 433 LTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAF 492

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            LF  M+   + PN++++  LI    +     +  +L  ++  + + P+  I + +++ L
Sbjct: 493 RLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGL 552



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 198/367 (53%), Gaps = 8/367 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T T + +I+   +   VD   ++  ++    +   +VT+N+LI+GLC    + +A  L
Sbjct: 155 PDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVEL 214

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+ +G QP V T+  I++ LCK G+   A+ L   M +   +P+  TYST++D  C 
Sbjct: 215 FDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCK 274

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++N A ++F  M++ G   +  +YN LI G C      EA ++  EM+S  I P +VT
Sbjct: 275 DRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVT 334

Query: 194 YNTLFLGLF----EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           + +L + +F     + +    LK   EM    V  +  TY++ ++G      +VEA +LF
Sbjct: 335 F-SLLINIFCKEGNVFEARGVLKTMTEM---GVEPNVVTYSSLMNGYSLQAEVVEARKLF 390

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +    C+ D+ +YN LI+G CK+ R+  A +LF  +  + L  D+V+YN +I GLC  
Sbjct: 391 DVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQL 450

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++ +AHDLF +M  N   P++  +  L+ GF +    +K   L   M+   + P+  + 
Sbjct: 451 GRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMY 510

Query: 370 SMVVDLL 376
           ++++D +
Sbjct: 511 NILIDAM 517



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 117/221 (52%), Gaps = 1/221 (0%)

Query: 157 VSYNILINGYCKNKEVEEA-LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
           + +N L++   K +   +A +SL ++M   G+ P   T + L    F++ +V+    +  
Sbjct: 122 IQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLA 181

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
           ++ +  +     T+NT I+GLCK G   +AVELF  +     + D+  Y  +I+GLCK G
Sbjct: 182 KIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIG 241

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
               A  LFR +       DVVTY+ +I  LC D ++++A D+F  M+   ++PN+  + 
Sbjct: 242 ETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYN 301

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +LI G    ++  +   +L++M    +MP+    S+++++ 
Sbjct: 302 SLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 342



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 36/208 (17%)

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI-HQVEHALKLFEEMQRDDVAADTST 228
           + +++AL+ +  M+ +  +P ++ +N L   + ++ H  +  + L ++M+   ++ DT T
Sbjct: 100 RNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYT 159

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
            +  I+                      C   +Q             R+++   +   + 
Sbjct: 160 LHMLIN----------------------CFFQLQ-------------RVDLGFSVLAKII 184

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
           +  L   +VT+N +I+GLC  G+  +A +LF DM      P+V  + T+I+G  +I +  
Sbjct: 185 KLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETV 244

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVDLL 376
               L  KM E    PD    S ++D L
Sbjct: 245 AAAGLFRKMGEAGCQPDVVTYSTIIDSL 272


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  293 bits (749), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 148/363 (40%), Positives = 223/363 (61%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PN VTY  +ID LCK G VD A   F QM  E + PD+  ++SL++GLC  + W +A+ 
Sbjct: 374 SPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEE 433

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LFFE++DQG++   V FN +M  LC+ G++ EA RL+DLM++  VRP+  +Y+TL+DG C
Sbjct: 434 LFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHC 493

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           LTG+I+ A +L   + S+G K D V+YN L++GYCK + +++A SL+REM+ KG+ P VV
Sbjct: 494 LTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVV 553

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNT+  GLF+  +   A +L+  M       +  TYN  I+GLCKN ++ EA ++F +L
Sbjct: 554 TYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSL 613

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +LDI   N +I  L K GR E A++LF ++    LV DV TY ++   L  +G +
Sbjct: 614 CSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSL 673

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++  +LF  MEEN  APN  +   L+   +     ++    L K+ EK    +AS  SM+
Sbjct: 674 EELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSML 733

Query: 373 VDL 375
           + +
Sbjct: 734 ISI 736



 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 189/379 (49%), Gaps = 35/379 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY T+IDGLCK   VD+AK +F  M  + + P+  TY  LIHG      W E  ++
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQM 259

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G+QP    + V++D LCKNG+  EA  + D ++++ ++PN   Y  L+ G+  
Sbjct: 260 LQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYAT 319

Query: 134 TGK-----------------------------------INRAEELFGSMESMGCKHDDVS 158
            G                                    I+ A  +F  M       + V+
Sbjct: 320 EGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVT 379

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y  LI+  CK   V++A+  + +M+ +G+ P +  +++L  GL  + + E A +LF E+ 
Sbjct: 380 YGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVL 439

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  DT  +NT +  LC+ G ++EA  L   +  +    D+ +YN L+DG C +GR++
Sbjct: 440 DQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRID 499

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +L   +    L  D VTYN ++HG C   ++D A+ LF +M    + P+V+ + T++
Sbjct: 500 EAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTIL 559

Query: 339 HGFVRINKPSKVIELLHKM 357
           HG  +  + S+  EL   M
Sbjct: 560 HGLFQTGRFSEAKELYLSM 578



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 181/362 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN   Y  ++ G   EG + +  +    M G  ++PD   +N +          +EA  
Sbjct: 304 KPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMH 363

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +M  Q + P++VT+  ++D LCK G++D+A    + M+   + P+ F +S+L+ G C
Sbjct: 364 IFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLC 423

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K  +AEELF  +   G + D V +N L+   C+   V EA  L   M+  G++P V+
Sbjct: 424 TVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVI 483

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNTL  G     +++ A KL + +    +  D  TYNT + G CK   I +A  LFR +
Sbjct: 484 SYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREM 543

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +     D+  YN ++ GL ++GR   A EL+ S+       ++ TYNI+I+GLC +  +
Sbjct: 544 LMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFV 603

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A  +F  +    +  ++     +I   ++  +    ++L   +    ++PD     ++
Sbjct: 604 DEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLI 663

Query: 373 VD 374
            +
Sbjct: 664 AE 665



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 181/383 (47%), Gaps = 9/383 (2%)

Query: 1   MANGNGEIGVVCKP-----NTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTY 54
           + +G    G++ K      +TV ++ ++ GLC    VD+A  + L+   E    PDV +Y
Sbjct: 108 LKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSY 167

Query: 55  NSLIHGLCHANDWNEAKRLFFEMMDQG---VQPSVVTFNVIMDELCKNGKMDEASRLLDL 111
           + L+ G C+     EA  L   M D G     P+VVT+  ++D LCK   +D A  +   
Sbjct: 168 SILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQH 227

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           M+ + VRPN  TY+ L+ G+   GK     ++   M + G + D   Y +L++  CKN  
Sbjct: 228 MIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGR 287

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
             EA +++  ++ KGIKP V  Y  L  G      +       + M  + V+ D   +N 
Sbjct: 288 CTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNI 347

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
                 K   I EA+ +F  +   +   +I  Y  LID LCK GR++ A+  F  +    
Sbjct: 348 MFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEG 407

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           +  D+  ++ +++GLC   + +KA +LF ++ +  +  + + F TL+    R  +  +  
Sbjct: 408 MTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQ 467

Query: 352 ELLHKMKEKKVMPDASIVSMVVD 374
            L+  M    V PD    + +VD
Sbjct: 468 RLIDLMLRVGVRPDVISYNTLVD 490



 Score =  140 bits (353), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 164/356 (46%), Gaps = 11/356 (3%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK---RLFFEMMDQ---GVQPS 85
           ++ A  LF +M        V  +N L+  +  A   + ++    LF  M+ +    V PS
Sbjct: 32  LNDALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPS 91

Query: 86  VVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN-AFTYSTLMDGFCLTGKINRAEE-L 143
             T+ +++   C+ G++        L+++   R N    +S L+ G C   +++ A + L
Sbjct: 92  SFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDIL 151

Query: 144 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG---IKPTVVTYNTLFLG 200
              M   GC  D  SY+IL+ G+C  K  EEAL L   M   G     P VVTY T+  G
Sbjct: 152 LRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDG 211

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
           L +   V+ A  +F+ M    V  +  TY   I G    G   E V++ + +     + D
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPD 271

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
              Y  L+D LCK+GR   A  +F S+ R+ +  +V  Y I++HG   +G + + H    
Sbjct: 272 CYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLD 331

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            M  N V+P+  IF  +   + +     + + +  KM+++++ P+      ++D L
Sbjct: 332 LMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDAL 387



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 142/284 (50%), Gaps = 6/284 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            +GV  +P+ ++YNT++DG C  G +D+A  L   +    + PD VTYN+L+HG C A  
Sbjct: 475 RVGV--RPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARR 532

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            ++A  LF EM+ +G+ P VVT+N I+  L + G+  EA  L   M+    + N +TY+ 
Sbjct: 533 IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNI 592

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           +++G C    ++ A ++F S+ S   + D  + NI+I    K    E+A+ L+  + + G
Sbjct: 593 IINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYG 652

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P V TY  +   L +   +E   +LF  M+ +  A ++   N  +  L   G I  A 
Sbjct: 653 LVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAG 712

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
                L      L+    + LI    +    ++A    +SLP +
Sbjct: 713 AYLSKLDEKNFSLEASTTSMLISIYSRGEYQQLA----KSLPEK 752


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  293 bits (749), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 145/362 (40%), Positives = 222/362 (61%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ V Y +IID LCK+  V +A  LF QM G+ I+PD+ TY SL+H LC+  +W    
Sbjct: 201 CQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVT 260

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +M++  + P VV F+ ++D LCK GK+ EA  ++D+M+QR V P+  TY+TLMDG 
Sbjct: 261 TLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGH 320

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL  +++ A ++F  M   G   D +SY  LINGYCK  ++++A+ L+ EM  K   P  
Sbjct: 321 CLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDT 380

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYNTL  GL  + +++ A+ LF EM       D  TY+  +D LCKN ++ EA+ L + 
Sbjct: 381 KTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKA 440

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       DIQ YN +IDG+C++G LE A +LF +L  + L   V TYNIMIHGLC  G 
Sbjct: 441 IEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGL 500

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A+ LF++M+ N  +P+   + T+  GF++ N+  + I+LL +M  +    D+  + +
Sbjct: 501 LNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADSCFLML 560

Query: 372 VV 373
            V
Sbjct: 561 SV 562



 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 184/363 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +  ++  + K        +L  QM    + P+V T N LI+  CH N    A  +
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G QP   TF  ++  LC  GK+ EA  L D M+    +PN  TY TL++G C 
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A  L  SME   C+ D V Y  +I+  CK+++V EA +L+ +MV +GI P + T
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +L   L  + + +H   L  +M    +  D   ++T +D LCK G + EA E+   + 
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 302

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E D+  Y  L+DG C    ++ A+++F  + R+    DV++Y  +I+G C   ++D
Sbjct: 303 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 362

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA  LF +M      P+   + TL++G   + +    I L H+M  +  MPD    S+++
Sbjct: 363 KAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 422

Query: 374 DLL 376
           D L
Sbjct: 423 DSL 425



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 164/342 (47%), Gaps = 41/342 (11%)

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD---VRP 119
           H N  ++A   F  ++     PS+V F  ++  + K   M   S +L L  Q D   V P
Sbjct: 42  HFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAK---MKHYSTVLSLSTQMDSFGVPP 98

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           N +T + L++ FC   ++  A  +   +  +G + D  ++  LI G C   ++ EAL L+
Sbjct: 99  NVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLF 158

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            +M+ +G +P VVTY TL  GL ++     A++L   M++ +   D   Y + ID LCK+
Sbjct: 159 DKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKD 218

Query: 240 GYIVEAVELFRTL---GILK---------------CEL-----------------DIQAY 264
             + EA  LF  +   GI                 CE                  D+  +
Sbjct: 219 RQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIF 278

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
           + ++D LCK G++  A E+   + +R +  DVVTY  ++ G C   +MD+A  +F  M  
Sbjct: 279 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 338

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              AP+VI + TLI+G+ +I+K  K + L  +M  K+ +PD 
Sbjct: 339 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDT 380



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 131/273 (47%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D+A    + ++     P+   ++ L+         +    L   M+S G   +  + NI
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LIN +C    V  A S+  +++  G +P   T+ TL  GL    ++  AL LF++M  + 
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              +  TY T I+GLCK G    A+ L R++    C+ D+  Y  +ID LCK  ++  A 
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            LF  +  + +  D+ TY  ++H LCN  +      L   M  + + P+V+IF T++   
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +  K ++  E++  M ++ V PD    + ++D
Sbjct: 286 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMD 318



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 35/240 (14%)

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           +++ALS +  ++     P++V +  L   + ++      L L  +M    V  +  T N 
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            I+  C    +  A  +   +  L  + D   +  LI GLC  G++  AL LF  +    
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 292 LVADVVTYNIMIHG-----------------------------------LCNDGQMDKAH 316
              +VVTY  +I+G                                   LC D Q+ +A 
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +LF  M    ++P++  + +L+H    + +   V  LL++M   K++PD  I S VVD L
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  293 bits (749), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 145/362 (40%), Positives = 225/362 (62%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  V Y  +ID LCK G VD A   F QM  E + PD+  ++SL++GLC  + W +A++L
Sbjct: 375 PGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKL 434

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           FFE++DQG++ +   FN++M  LC+ G++ EA RL+DLM++ DVRP+  +Y+TL+DG CL
Sbjct: 435 FFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCL 494

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG+I+ A +L   M S+G K D+ +YN L++GYCK + +++A SL+REM+ KG+ P VVT
Sbjct: 495 TGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVT 554

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+  GLF+I +   A +L+  M  +    D  TY   ++GLC+N ++ EA ++F++L 
Sbjct: 555 YNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLC 614

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +LDI   N +I  L K GR E A++LF ++    LV DV TY ++   L  +G ++
Sbjct: 615 SKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLE 674

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +  +LF  MEEN  APN  +   L+   +      +    L K+ EK    +AS  SM++
Sbjct: 675 ELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLI 734

Query: 374 DL 375
            +
Sbjct: 735 SI 736



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 193/396 (48%), Gaps = 35/396 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY T+IDGLCK   VD+AK +F  M  + + P+  TY  LIHG      W E  ++
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQM 259

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G+QP  V + V++D LCKNG+  EA  + D ++++ ++P+   Y  L+ G+  
Sbjct: 260 LQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYAT 319

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL--------------- 178
            G ++        M   G   D   +NI+ N Y K   ++EA+ +               
Sbjct: 320 EGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVN 379

Query: 179 --------------------YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
                               + +M+++G+ P +  +++L  GL  + + E A KLF E+ 
Sbjct: 380 YGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVL 439

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  + + +N  +  LC+ G ++EA  L   +  +    D+ +YN L+DG C +GR++
Sbjct: 440 DQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRID 499

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +L   +    L  D  TYN ++HG C   ++D A+ LF +M    + P V+ + T++
Sbjct: 500 EAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTIL 559

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           HG  +I +  +  EL   M   +   D    +++++
Sbjct: 560 HGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILN 595



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 180/383 (46%), Gaps = 9/383 (2%)

Query: 1   MANGNGEIGVVCKP-----NTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTY 54
           + +G    G++ K      NTV +  ++ GLC    VD+A  + L+   E     +V++Y
Sbjct: 108 LKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISY 167

Query: 55  NSLIHGLCHANDWNEAKRLFFEMMDQG---VQPSVVTFNVIMDELCKNGKMDEASRLLDL 111
           N L+ GLC+     EA  L   M D G     P+VVT+  ++D LCK   +D A  +   
Sbjct: 168 NILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQH 227

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           M+ + VRPN  TY+ L+ G+  TGK     ++   M + G + D V Y +L++  CKN  
Sbjct: 228 MIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGR 287

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
             EA +++  ++ KGIKP V  Y  L  G      +       + M R+ V+ D   +N 
Sbjct: 288 CTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNI 347

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
             +   K   I EA+ +F  +        +  Y  LID LCK GR++ A+  F  +    
Sbjct: 348 MFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEG 407

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           +  D+  ++ +++GLC   + +KA  LF ++ +  +  N   F  L+    R  +  +  
Sbjct: 408 VTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQ 467

Query: 352 ELLHKMKEKKVMPDASIVSMVVD 374
            L+  M    V PD    + +VD
Sbjct: 468 RLIDLMLRVDVRPDVISYNTLVD 490



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 187/399 (46%), Gaps = 35/399 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+   Y  ++ G   EG + +  +    M    ++PD   +N + +        +EA  
Sbjct: 304 KPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMH 363

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +M  Q + P VV +  ++D LCK G++D+A    + M+   V P+ F +S+L+ G C
Sbjct: 364 IFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLC 423

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K  +AE+LF  +   G + +   +NIL+   C+   V EA  L   M+   ++P V+
Sbjct: 424 TVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVI 483

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR-- 250
           +YNTL  G     +++ A KL + M    +  D  TYNT + G CK   I +A  LFR  
Sbjct: 484 SYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREM 543

Query: 251 -----TLGILK--------------CEL--------------DIQAYNCLIDGLCKSGRL 277
                T G++               CE               DI  Y  +++GLC++  +
Sbjct: 544 LMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFV 603

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A ++F+SL  + L  D+ T NIMI  L   G+ + A DLF  +    + P+V  +  +
Sbjct: 604 DEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLI 663

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               ++     ++ EL   M+E    P++ +++ +V  L
Sbjct: 664 AENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWL 702



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 166/368 (45%), Gaps = 13/368 (3%)

Query: 22  IIDGLCKEGFV--DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK---RLFFE 76
           +I G  + G +  D A  LF +M        V T+N L+  +  A   + ++    LF  
Sbjct: 20  VIAGRARSGSLGLDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNR 79

Query: 77  MMDQ---GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR-PNAFTYSTLMDGFC 132
           M+ +    V PS  T+ +++   C+ G++        L+++      N   +  L+ G C
Sbjct: 80  MIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLC 139

Query: 133 LTGKINRAEE-LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG---IK 188
              +++ A + L   M   GC  + +SYNIL+ G C  K  EEAL L   M   G     
Sbjct: 140 DAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHT 199

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTY T+  GL +   V+ A  +F+ M    V  +  TY   I G    G   E V++
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQM 259

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            + +     + D   Y  L+D LCK+GR   A  +F SL R+ +   V  Y I++HG   
Sbjct: 260 LQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYAT 319

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           +G + + H     M  N V+P+  IF  + + + +     + + +  KM+++ + P    
Sbjct: 320 EGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVN 379

Query: 369 VSMVVDLL 376
              ++D L
Sbjct: 380 YGALIDAL 387



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 123/233 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ ++YNT++DG C  G +D+A  L   M    + PD  TYN+L+HG C A   ++A  
Sbjct: 479 RPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYS 538

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM+ +G+ P VVT+N I+  L + G+  EA  L   M+    + + +TY+ +++G C
Sbjct: 539 LFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLC 598

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               ++ A ++F S+ S   + D  + NI+I    K    E+A+ L+  + + G+ P V 
Sbjct: 599 RNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVE 658

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           TY  +   L +   +E   +LF  M+ +  A ++   N  +  L   G I  A
Sbjct: 659 TYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRA 711



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 14/348 (4%)

Query: 37  ALFLQMKGE---NINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQ-PSVVTFNVI 92
           +LF +M  E    + P   TY  LI   C           F  ++  G    + V F  +
Sbjct: 75  SLFNRMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQL 134

Query: 93  MDELCKNGKMDEASR-LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +  LC   ++DEA+  LL  M +     N  +Y+ L+ G C      RAEE    M  M 
Sbjct: 135 LKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLC---NEKRAEEALELMHMMA 191

Query: 152 CKHDD------VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 205
              D       V+Y  +I+G CK + V+ A  +++ M+ KG++P   TY  L  G     
Sbjct: 192 DDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTG 251

Query: 206 QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYN 265
           + +  +++ +EM    +  D   Y   +D LCKNG   EA  +F +L     +  +  Y 
Sbjct: 252 KWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYG 311

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
            L+ G    G L         + R  +  D   +NIM +       +D+A  +F  M + 
Sbjct: 312 ILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQ 371

Query: 326 AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            ++P V+ +  LI    ++ +    +   ++M  + V PD  + S +V
Sbjct: 372 WLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLV 419



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 112/226 (49%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + +  KP+  TYNT++ G CK   +D A +LF +M  + + P VVTYN+++HGL     +
Sbjct: 509 VSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRF 568

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EAK L+  M++   +  + T+ +I++ LC+N  +DEA ++   +  +D++ + FT + +
Sbjct: 569 CEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIM 628

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +      G+   A +LF ++ + G   D  +Y ++     K   +EE   L+  M   G 
Sbjct: 629 IGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGT 688

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
            P     N L   L     +  A     ++   + + + ST +  I
Sbjct: 689 APNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLI 734


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  292 bits (748), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 145/364 (39%), Positives = 225/364 (61%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + + V Y+T+ID LCK   VD A  LF +M  + I PDV TY+SLI  LC+   W++A R
Sbjct: 237 EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 296

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+++ + P+VVTFN ++D   K GK+ EA +L D M+QR + PN  TY++L++GFC
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  +++ A+++F  M S  C  D V+YN LING+CK K+V + + L+R+M  +G+    V
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  G F+    ++A  +F++M  D V  +  TYNT +DGLCKNG + +A+ +F  L
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K E DI  YN + +G+CK+G++E   +LF SL  + +  DV+ YN MI G C  G  
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A+ LF+ M+E+   P+   + TLI   +R    +   EL+ +M+  +   DAS   +V
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596

Query: 373 VDLL 376
            D+L
Sbjct: 597 TDML 600



 Score =  249 bits (635), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 133/362 (36%), Positives = 206/362 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ VTY  +I+GLCK G  D A  L  +M+   I  DVV Y+++I  LC     ++A 
Sbjct: 201 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDAL 260

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM ++G++P V T++ ++  LC  G+  +ASRLL  M++R + PN  T+++L+D F
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GK+  AE+LF  M       + V+YN LING+C +  ++EA  ++  MVSK   P V
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  G  +  +V   ++LF +M R  +  +T TY T I G  +      A  +F+ 
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       +I  YN L+DGLCK+G+LE A+ +F  L +  +  D+ TYNIM  G+C  G+
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           ++   DLF  +    V P+VI + T+I GF +     +   L  KMKE   +PD+   + 
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNT 560

Query: 372 VV 373
           ++
Sbjct: 561 LI 562



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 191/352 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT N++++G C    + +A AL  QM      PD VT+ +L+HGL   N  +EA  L
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+ +G QP +VT+  +++ LCK G+ D A  LL+ M +  +  +   YST++D  C 
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              ++ A  LF  M++ G + D  +Y+ LI+  C      +A  L  +M+ + I P VVT
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N+L     +  ++  A KLF+EM +  +  +  TYN+ I+G C +  + EA ++F  + 
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D+  YN LI+G CK+ ++   +ELFR + RR LV + VTY  +IHG       D
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            A  +F  M  + V PN++ + TL+ G  +  K  K + +   +++ K+ PD
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484



 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 193/362 (53%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  TYN +I+ LC+   +  A A+  +M      P +VT NSL++G CH N  +EA  L 
Sbjct: 99  NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M++ G QP  VTF  ++  L ++ K  EA  L++ MV +  +P+  TY  +++G C  
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+ + A  L   ME    + D V Y+ +I+  CK + V++AL+L+ EM +KGI+P V TY
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           ++L   L    +   A +L  +M    +  +  T+N+ ID   K G ++EA +LF  +  
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + +I  YN LI+G C   RL+ A ++F  +  +  + DVVTYN +I+G C   ++  
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +LF DM    +  N + + TLIHGF + +       +  +M    V P+    + ++D
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458

Query: 375 LL 376
            L
Sbjct: 459 GL 460



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 179/347 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V ++ ++  + K    D   +   +M+   ++ ++ TYN +I+ LC  +  + A  +
Sbjct: 63  PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +MM  G  PS+VT N +++  C   ++ EA  L+D MV+   +P+  T++TL+ G   
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K + A  L   M   GC+ D V+Y  +ING CK  E + AL+L  +M    I+  VV 
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+T+   L +   V+ AL LF EM    +  D  TY++ I  LC  G   +A  L   + 
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K   ++  +N LID   K G+L  A +LF  + +R +  ++VTYN +I+G C   ++D
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +A  +F  M      P+V+ + TLI+GF +  K    +EL   M  +
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 177/334 (52%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D+A  LF +M      P +V ++ L+  +     ++       +M   GV  ++ T+N+
Sbjct: 46  LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++ LC+  ++  A  +L  M++    P+  T ++L++GFC   +I+ A  L   M  MG
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + D V++  L++G  ++ +  EA++L   MV KG +P +VTY  +  GL +  + + AL
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            L  +M++  + AD   Y+T ID LCK  ++ +A+ LF  +       D+  Y+ LI  L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C  GR   A  L   +  R +  +VVT+N +I     +G++ +A  LF +M + ++ PN+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + + +LI+GF   ++  +  ++   M  K  +PD
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 90/265 (33%), Positives = 140/265 (52%), Gaps = 1/265 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTYN++I+G C    +D+A+ +F  M  ++  PDVVTYN+LI+G C A    +   L
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M  +G+  + VT+  ++    +    D A  +   MV   V PN  TY+TL+DG C 
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+ +A  +F  ++    + D  +YNI+  G CK  +VE+   L+  +  KG+KP V+ 
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIA 522

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+  G  +    E A  LF +M+ D    D+ TYNT I    ++G    + EL + + 
Sbjct: 523 YNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 582

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLE 278
             +   D   Y  + D L   GRL+
Sbjct: 583 SCRFAGDASTYGLVTDML-HDGRLD 606



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 127/225 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYNT+I+G CK   V     LF  M    +  + VTY +LIHG   A+D + A+
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQ 435

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F +M+  GV P+++T+N ++D LCKNGK+++A  + + + +  + P+ +TY+ + +G 
Sbjct: 436 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+    +LF S+   G K D ++YN +I+G+CK    EEA +L+ +M   G  P  
Sbjct: 496 CKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDS 555

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            TYNTL            + +L +EM+    A D STY    D L
Sbjct: 556 GTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 152/299 (50%), Gaps = 4/299 (1%)

Query: 80  QGVQPSVVTFNVIMDELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
           +G+  S ++++   ++L +N     K+DEA  L   MV+    P+   +S L+       
Sbjct: 20  RGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMK 79

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           K +        ME +G  H+  +YNI+IN  C+  ++  AL++  +M+  G  P++VT N
Sbjct: 80  KFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLN 139

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           +L  G    +++  A+ L ++M       DT T+ T + GL ++    EAV L   + + 
Sbjct: 140 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 199

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
            C+ D+  Y  +I+GLCK G  ++AL L   + +  + ADVV Y+ +I  LC    +D A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +LF +M+   + P+V  + +LI       + S    LL  M E+K+ P+    + ++D
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  292 bits (748), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 148/364 (40%), Positives = 224/364 (61%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  + YNTIIDGLCK   +D A  LF +M+ + I P+VVTY+SLI  LC+   W++A R
Sbjct: 253 EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 312

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+++ + P V TF+ ++D   K GK+ EA +L D MV+R + P+  TYS+L++GFC
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  +++ A+++F  M S  C  D V+YN LI G+CK K VEE + ++REM  +G+    V
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L  GLF+    + A ++F+EM  D V  +  TYNT +DGLCKNG + +A+ +F  L
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K E  I  YN +I+G+CK+G++E   +LF +L  + +  DVV YN MI G C  G  
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A  LF +M+E+   PN   + TLI   +R        EL+ +M+      DAS + +V
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612

Query: 373 VDLL 376
            ++L
Sbjct: 613 TNML 616



 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 119/352 (33%), Positives = 194/352 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VT +++++G C    + +A AL  QM      P+ VT+N+LIHGL   N  +EA  
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMA 207

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+ +G QP +VT+ V+++ LCK G  D A  LL+ M Q  + P    Y+T++DG C
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 267

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               ++ A  LF  ME+ G + + V+Y+ LI+  C      +A  L  +M+ + I P V 
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++ L     +  ++  A KL++EM +  +     TY++ I+G C +  + EA ++F  +
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D+  YN LI G CK  R+E  +E+FR + +R LV + VTYNI+I GL   G  
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           D A ++F +M  + V PN++ + TL+ G  +  K  K + +   ++  K+ P
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 159/307 (51%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  LF EM+     PS++ F+ ++  + K  K D    L + M    +  N +TYS L
Sbjct: 63  DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++ FC   ++  A  + G M  +G + + V+ + L+NGYC +K + EA++L  +M   G 
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P  VT+NTL  GLF  ++   A+ L + M       D  TY   ++GLCK G    A  
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +   K E  +  YN +IDGLCK   ++ AL LF+ +  + +  +VVTY+ +I  LC
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           N G+   A  L  DM E  + P+V  F  LI  FV+  K  +  +L  +M ++ + P   
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362

Query: 368 IVSMVVD 374
             S +++
Sbjct: 363 TYSSLIN 369



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 126/217 (58%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYNT+I G CK   V++   +F +M    +  + VTYN LI GL  A D + A+
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F EM+  GV P+++T+N ++D LCKNGK+++A  + + + +  + P  +TY+ +++G 
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+    +LF ++   G K D V+YN +I+G+C+    EEA +L++EM   G  P  
Sbjct: 512 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             YNTL          E + +L +EM+    A D ST
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 175/334 (52%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D A ALF +M      P ++ ++ L+  +   N ++    L  +M + G+  +  T+++
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C+  ++  A  +L  M++    PN  T S+L++G+C + +I+ A  L   M   G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + + V++N LI+G   + +  EA++L   MV+KG +P +VTY  +  GL +    + A 
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            L  +M++  +      YNT IDGLCK  ++ +A+ LF+ +       ++  Y+ LI  L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C  GR   A  L   +  R +  DV T++ +I     +G++ +A  L+ +M + ++ P++
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + + +LI+GF   ++  +  ++   M  K   PD
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 145/285 (50%), Gaps = 4/285 (1%)

Query: 94  DELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
           ++L +NG    K+D+A  L   MV+    P+   +S L+       K +    L   M++
Sbjct: 50  EKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN 109

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
           +G  H+  +Y+ILIN +C+  ++  AL++  +M+  G +P +VT ++L  G     ++  
Sbjct: 110 LGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 169

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           A+ L ++M       +T T+NT I GL  +    EA+ L   +    C+ D+  Y  +++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           GLCK G  ++A  L   + +  L   V+ YN +I GLC    MD A +LF +ME   + P
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           NV+ + +LI       + S    LL  M E+K+ PD    S ++D
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  292 bits (747), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 148/364 (40%), Positives = 224/364 (61%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            +P  + YNTIIDGLCK   +D A  LF +M+ + I P+VVTY+SLI  LC+   W++A R
Sbjct: 867  EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 926

Query: 73   LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            L  +M+++ + P V TF+ ++D   K GK+ EA +L D MV+R + P+  TYS+L++GFC
Sbjct: 927  LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 986

Query: 133  LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +  +++ A+++F  M S  C  D V+YN LI G+CK K VEE + ++REM  +G+    V
Sbjct: 987  MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 1046

Query: 193  TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            TYN L  GLF+    + A ++F+EM  D V  +  TYNT +DGLCKNG + +A+ +F  L
Sbjct: 1047 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 1106

Query: 253  GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               K E  I  YN +I+G+CK+G++E   +LF +L  + +  DVV YN MI G C  G  
Sbjct: 1107 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 1166

Query: 313  DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            ++A  LF +M+E+   PN   + TLI   +R        EL+ +M+      DAS + +V
Sbjct: 1167 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 1226

Query: 373  VDLL 376
             ++L
Sbjct: 1227 TNML 1230



 Score =  263 bits (672), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 130/324 (40%), Positives = 201/324 (62%), Gaps = 2/324 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           EIG   KP+ V YN IID LCK   V+ A   F +++ + I P+VVTY +L++GLC+++ 
Sbjct: 286 EIGY--KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 343

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           W++A RL  +M+ + + P+V+T++ ++D   KNGK+ EA  L + MV+  + P+  TYS+
Sbjct: 344 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 403

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L++G CL  +I+ A ++F  M S GC  D VSYN LING+CK K VE+ + L+REM  +G
Sbjct: 404 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 463

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +    VTYNTL  G F+   V+ A + F +M    ++ D  TYN  + GLC NG + +A+
Sbjct: 464 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 523

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            +F  +   + +LDI  Y  +I G+CK+G++E A  LF SL  + L  D+VTY  M+ GL
Sbjct: 524 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 583

Query: 307 CNDGQMDKAHDLFLDMEENAVAPN 330
           C  G + +   L+  M++  +  N
Sbjct: 584 CTKGLLHEVEALYTKMKQEGLMKN 607



 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 125/358 (34%), Positives = 204/358 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT  ++++G C+   V  A +L  +M      PD+V YN++I  LC     N+A  
Sbjct: 255 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD 314

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F E+  +G++P+VVT+  +++ LC + +  +A+RLL  M+++ + PN  TYS L+D F 
Sbjct: 315 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 374

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A+ELF  M  M    D V+Y+ LING C +  ++EA  ++  MVSKG    VV
Sbjct: 375 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV 434

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNTL  G  +  +VE  +KLF EM +  + ++T TYNT I G  + G + +A E F  +
Sbjct: 435 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 494

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  DI  YN L+ GLC +G LE AL +F  + +R +  D+VTY  +I G+C  G++
Sbjct: 495 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 554

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++A  LF  +    + P+++ + T++ G        +V  L  KMK++ +M +   +S
Sbjct: 555 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 612



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 119/352 (33%), Positives = 194/352 (55%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            +PN VT +++++G C    + +A AL  QM      P+ VT+N+LIHGL   N  +EA  
Sbjct: 762  EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMA 821

Query: 73   LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            L   M+ +G QP +VT+ V+++ LCK G  D A  LL+ M Q  + P    Y+T++DG C
Sbjct: 822  LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 881

Query: 133  LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                ++ A  LF  ME+ G + + V+Y+ LI+  C      +A  L  +M+ + I P V 
Sbjct: 882  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 941

Query: 193  TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            T++ L     +  ++  A KL++EM +  +     TY++ I+G C +  + EA ++F  +
Sbjct: 942  TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 1001

Query: 253  GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                C  D+  YN LI G CK  R+E  +E+FR + +R LV + VTYNI+I GL   G  
Sbjct: 1002 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 1061

Query: 313  DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            D A ++F +M  + V PN++ + TL+ G  +  K  K + +   ++  K+ P
Sbjct: 1062 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 1113



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 193/360 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +N ++  + K    D   +L  +M+   I  D+ T+N +I+  C     + A  +
Sbjct: 186 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 245

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+  G +P  VT   +++  C+  ++ +A  L+D MV+   +P+   Y+ ++D  C 
Sbjct: 246 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 305

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           T ++N A + F  +E  G + + V+Y  L+NG C +    +A  L  +M+ K I P V+T
Sbjct: 306 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 365

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L     +  +V  A +LFEEM R  +  D  TY++ I+GLC +  I EA ++F  + 
Sbjct: 366 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 425

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D+ +YN LI+G CK+ R+E  ++LFR + +R LV++ VTYN +I G    G +D
Sbjct: 426 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 485

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA + F  M+   ++P++  +  L+ G     +  K + +   M+++++  D    + V+
Sbjct: 486 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 545



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 189/348 (54%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T+N +I+  C    V  A ++  +M      PD VT  SL++G C  N  ++A  L  +M
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           ++ G +P +V +N I+D LCK  ++++A      + ++ +RPN  TY+ L++G C + + 
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  L   M       + ++Y+ L++ + KN +V EA  L+ EMV   I P +VTY++L
Sbjct: 345 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 404

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL    +++ A ++F+ M      AD  +YNT I+G CK   + + ++LFR +     
Sbjct: 405 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 464

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             +   YN LI G  ++G ++ A E F  +    +  D+ TYNI++ GLC++G+++KA  
Sbjct: 465 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 524

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +F DM++  +  +++ + T+I G  +  K  +   L   +  K + PD
Sbjct: 525 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 572



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 194/414 (46%), Gaps = 52/414 (12%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENI--------NPDVVTYNSLIH----- 59
           KP+ VTY T++ GLC +G + + +AL+ +MK E +        + D+     LI      
Sbjct: 570 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSC 629

Query: 60  ------------GLCH-------------ANDWNE--------------AKRLFFEMMDQ 80
                       G+C              + D+ E              A  LF EM+  
Sbjct: 630 GYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKS 689

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
              PS++ F+ ++  + K  K D    L + M    +  N +TYS L++ FC   ++  A
Sbjct: 690 RPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLA 749

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
             + G M  +G + + V+ + L+NGYC +K + EA++L  +M   G +P  VT+NTL  G
Sbjct: 750 LAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHG 809

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
           LF  ++   A+ L + M       D  TY   ++GLCK G    A  L   +   K E  
Sbjct: 810 LFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPG 869

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           +  YN +IDGLCK   ++ AL LF+ +  + +  +VVTY+ +I  LCN G+   A  L  
Sbjct: 870 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 929

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           DM E  + P+V  F  LI  FV+  K  +  +L  +M ++ + P     S +++
Sbjct: 930 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 983



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 169/328 (51%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           LF  M      P +V +N L+  +     ++    L  +M   G++  + TFN++++  C
Sbjct: 175 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 234

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
              ++  A  +L  M++    P+  T  +L++GFC   +++ A  L   M  +G K D V
Sbjct: 235 CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIV 294

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +YN +I+  CK K V +A   ++E+  KGI+P VVTY  L  GL    +   A +L  +M
Sbjct: 295 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 354

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
            +  +  +  TY+  +D   KNG ++EA ELF  +  +  + DI  Y+ LI+GLC   R+
Sbjct: 355 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 414

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A ++F  +  +  +ADVV+YN +I+G C   +++    LF +M +  +  N + + TL
Sbjct: 415 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 474

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPD 365
           I GF +     K  E   +M    + PD
Sbjct: 475 IQGFFQAGDVDKAQEFFSQMDFFGISPD 502



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 126/217 (58%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            C P+ VTYNT+I G CK   V++   +F +M    +  + VTYN LI GL  A D + A+
Sbjct: 1006 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 1065

Query: 72   RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             +F EM+  GV P+++T+N ++D LCKNGK+++A  + + + +  + P  +TY+ +++G 
Sbjct: 1066 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 1125

Query: 132  CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            C  GK+    +LF ++   G K D V+YN +I+G+C+    EEA +L++EM   G  P  
Sbjct: 1126 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 1185

Query: 192  VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
              YNTL          E + +L +EM+    A D ST
Sbjct: 1186 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 1222



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 175/334 (52%)

Query: 32   VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
            +D A ALF +M      P ++ ++ L+  +   N ++    L  +M + G+  +  T+++
Sbjct: 676  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 735

Query: 92   IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
            +++  C+  ++  A  +L  M++    PN  T S+L++G+C + +I+ A  L   M   G
Sbjct: 736  LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795

Query: 152  CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
             + + V++N LI+G   + +  EA++L   MV+KG +P +VTY  +  GL +    + A 
Sbjct: 796  YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855

Query: 212  KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
             L  +M++  +      YNT IDGLCK  ++ +A+ LF+ +       ++  Y+ LI  L
Sbjct: 856  NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 915

Query: 272  CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
            C  GR   A  L   +  R +  DV T++ +I     +G++ +A  L+ +M + ++ P++
Sbjct: 916  CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 975

Query: 332  IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            + + +LI+GF   ++  +  ++   M  K   PD
Sbjct: 976  VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 1009



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 159/299 (53%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           N+A  LF +M+     PS+V FN ++  + K  K D    L   M    +R + +T++ +
Sbjct: 170 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 229

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++ FC   +++ A  + G M  +G + D V+   L+NG+C+   V +A+SL  +MV  G 
Sbjct: 230 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 289

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP +V YN +   L +  +V  A   F+E++R  +  +  TY   ++GLC +    +A  
Sbjct: 290 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 349

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +   K   ++  Y+ L+D   K+G++  A ELF  + R  +  D+VTY+ +I+GLC
Sbjct: 350 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 409

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              ++D+A+ +F  M       +V+ + TLI+GF +  +    ++L  +M ++ ++ + 
Sbjct: 410 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 468



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 121/241 (50%)

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           K+N A +LF  M         V +N L++   K K+ +  +SL ++M   GI+  + T+N
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
            +        QV  AL +  +M +     D  T  + ++G C+   + +AV L   +  +
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
             + DI AYN +ID LCK+ R+  A + F+ + R+ +  +VVTY  +++GLCN  +   A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
             L  DM +  + PNVI +  L+  FV+  K  +  EL  +M    + PD    S +++ 
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407

Query: 376 L 376
           L
Sbjct: 408 L 408


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  292 bits (747), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 148/364 (40%), Positives = 224/364 (61%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  + YNTIIDGLCK   +D A  LF +M+ + I P+VVTY+SLI  LC+   W++A R
Sbjct: 48  EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 107

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+++ + P V TF+ ++D   K GK+ EA +L D MV+R + P+  TYS+L++GFC
Sbjct: 108 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 167

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  +++ A+++F  M S  C  D V+YN LI G+CK K VEE + ++REM  +G+    V
Sbjct: 168 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 227

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L  GLF+    + A ++F+EM  D V  +  TYNT +DGLCKNG + +A+ +F  L
Sbjct: 228 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 287

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K E  I  YN +I+G+CK+G++E   +LF +L  + +  DVV YN MI G C  G  
Sbjct: 288 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 347

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A  LF +M+E+   PN   + TLI   +R        EL+ +M+      DAS + +V
Sbjct: 348 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 407

Query: 373 VDLL 376
            ++L
Sbjct: 408 TNML 411



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 189/372 (50%), Gaps = 35/372 (9%)

Query: 37  ALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
           AL  +M  +   PD+VTY  +++GLC   D + A  L  +M    ++P V+ +N I+D L
Sbjct: 2   ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           CK   MD+A  L   M  + +RPN  TYS+L+   C  G+ + A  L   M       D 
Sbjct: 62  CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            +++ LI+ + K  ++ EA  LY EMV + I P++VTY++L  G     +++ A ++FE 
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL-----------------GILK--- 256
           M       D  TYNT I G CK   + E +E+FR +                 G+ +   
Sbjct: 182 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 241

Query: 257 CEL---------------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           C++               +I  YN L+DGLCK+G+LE A+ +F  L R  +   + TYNI
Sbjct: 242 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 301

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           MI G+C  G+++   DLF ++    V P+V+ + T+I GF R     +   L  +MKE  
Sbjct: 302 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 361

Query: 362 VMPDASIVSMVV 373
            +P++   + ++
Sbjct: 362 TLPNSGCYNTLI 373



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 126/217 (58%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYNT+I G CK   V++   +F +M    +  + VTYN LI GL  A D + A+
Sbjct: 187 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 246

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F EM+  GV P+++T+N ++D LCKNGK+++A  + + + +  + P  +TY+ +++G 
Sbjct: 247 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 306

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+    +LF ++   G K D V+YN +I+G+C+    EEA +L++EM   G  P  
Sbjct: 307 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 366

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             YNTL          E + +L +EM+    A D ST
Sbjct: 367 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 403



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 99/190 (52%)

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
           ++L   MV+KG +P +VTY  +  GL +    + A  L  +M++  +      YNT IDG
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           LCK  ++ +A+ LF+ +       ++  Y+ LI  LC  GR   A  L   +  R +  D
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           V T++ +I     +G++ +A  L+ +M + ++ P+++ + +LI+GF   ++  +  ++  
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 356 KMKEKKVMPD 365
            M  K   PD
Sbjct: 181 FMVSKHCFPD 190



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 81/164 (49%)

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           + L + M       D  TY   ++GLCK G    A  L   +   K E  +  YN +IDG
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LCK   ++ AL LF+ +  + +  +VVTY+ +I  LCN G+   A  L  DM E  + P+
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           V  F  LI  FV+  K  +  +L  +M ++ + P     S +++
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 164



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 44/82 (53%)

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           D+VTY ++++GLC  G  D A +L   ME+  + P V+I+ T+I G  +       + L 
Sbjct: 15  DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 74

Query: 355 HKMKEKKVMPDASIVSMVVDLL 376
            +M+ K + P+    S ++  L
Sbjct: 75  KEMETKGIRPNVVTYSSLISCL 96


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  291 bits (746), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 144/365 (39%), Positives = 226/365 (61%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN +TYNTIID L K+  V++A  +F +M  + I+P+V TYNS+IHGLC  ++W    
Sbjct: 210 CEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVA 269

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+D  + P+VV F  ++D LCK G +  A  ++D+M+QR V P+  TY+ LMDG 
Sbjct: 270 TLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGH 329

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL  +++ A+++F +M   GC  + +SY+ LINGYCK + +++A+ L+ EM  + + P +
Sbjct: 330 CLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNI 389

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  GL  + ++  A+ LF EM       D  TY   +D LCK  ++ +A+ + + 
Sbjct: 390 VTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKA 449

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       DIQ+YN +IDG+C+ G LE A +LF SL  + L  DV TY IMI+GLC  G 
Sbjct: 450 IEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGL 509

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + +A  LF +M  +  +P+   +  +  GF+R N+    I+LL +M  +    DAS +++
Sbjct: 510 LAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITL 569

Query: 372 VVDLL 376
           +V++L
Sbjct: 570 IVEML 574



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 183/363 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +  I+  +          +L  QM    I  DV T   +I+  CH N  +    +
Sbjct: 72  PSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSV 131

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++   G QP   TF  ++  LC  GK+ EA  L D MV    +PN  TY TL+ G C 
Sbjct: 132 LAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCK 191

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G    A  L  SM    C+ + ++YN +I+   K+++V EAL+++ EM++KGI P V T
Sbjct: 192 VGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVST 251

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN++  GL +  + +H   L  EM    +  +   + T +D LCK G +  A ++   + 
Sbjct: 252 YNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMI 311

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E D+  Y  L+DG C    ++ A ++F ++ R+    +V++Y+ +I+G C   ++D
Sbjct: 312 QRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRID 371

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA  LF +M +  + PN++ + TLIHG   + +    I L H+M     +PD     +++
Sbjct: 372 KAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILL 431

Query: 374 DLL 376
           D L
Sbjct: 432 DYL 434



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 164/297 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V + T++D LCKEG V  A  +   M    + PDVVTY +L+ G C  ++ +EA ++
Sbjct: 282 PNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKV 341

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+ +G  P+V++++ +++  CK  ++D+A  L + M QR++ PN  TY+TL+ G C 
Sbjct: 342 FDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCH 401

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A  LF  M + G   D V+Y IL++  CK + +++A+++ + +    + P + +
Sbjct: 402 VGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQS 461

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  G+  + ++E A  LF  +    +  D  TY   I+GLC  G + EA +LFR + 
Sbjct: 462 YNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMN 521

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
              C  D   YN +  G  ++     A++L + +  R   AD  T  +++  L +DG
Sbjct: 522 TDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDG 578



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 174/334 (52%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D+A + F +M      P VV +  ++  + +   ++    L  +M   G+   V T  +
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C   ++D    +L  + +   +P+  T++TL+ G C+ GKI  A  LF  M   G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + + V+Y  LI+G CK      A+ L R MV K  +P V+TYNT+   LF+  QV  AL
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            +F EM    ++ + STYN+ I GLCK         L   +   K   ++  +  L+D L
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           CK G + IA ++   + +R +  DVVTY  ++ G C   +MD+A  +F  M     APNV
Sbjct: 295 CKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNV 354

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           I + TLI+G+ +I +  K + L  +M +++++P+
Sbjct: 355 ISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPN 388



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 84/229 (36%), Positives = 132/229 (57%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN ++Y+T+I+G CK   +DKA  LF +M    + P++VTYN+LIHGLCH     +A 
Sbjct: 350 CAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAI 409

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+  G  P +VT+ +++D LCK   +D+A  +L  +   ++ P+  +Y+ ++DG 
Sbjct: 410 ALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGM 469

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++  A +LF S+ S G   D  +Y I+ING C    + EA  L+REM + G  P  
Sbjct: 470 CRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDD 529

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            TYN +  G    ++   A++L +EM     +AD ST    ++ L  +G
Sbjct: 530 CTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDG 578



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 79/205 (38%), Gaps = 35/205 (17%)

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           ++EALS +  M+     P+VV +  +   +  +      L L ++M              
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMD------------- 101

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
                              +LGI     D+     +I+  C   R++    +   + +  
Sbjct: 102 -------------------SLGIPS---DVYTLAIVINSFCHLNRVDFGFSVLAKIFKLG 139

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
              D  T+  +I GLC +G++ +A  LF  M      PN + + TLIHG  ++      I
Sbjct: 140 HQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAI 199

Query: 352 ELLHKMKEKKVMPDASIVSMVVDLL 376
            LL  M +K   P+    + ++D L
Sbjct: 200 RLLRSMVQKNCEPNVITYNTIIDCL 224



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 51/101 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY  +I+GLC +G + +A  LF +M  +  +PD  TYN +  G    N+   A +L
Sbjct: 492 PDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQL 551

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
             EM+ +G      T  +I++ L  +G      ++L   VQ
Sbjct: 552 LQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFVQ 592


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  291 bits (744), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 146/364 (40%), Positives = 225/364 (61%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY T+++GLCK+  + +A  LF +M  + I+PD+ TYNSLIH LC+  +W     
Sbjct: 158 QPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTT 217

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+   + P+VV+ N+++D LCK GK+ EA  ++D+M+Q  V P+  TY+ LMDG C
Sbjct: 218 LLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHC 277

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L  +++ A ++F  M   GC  + VSYN LINGYCK + +++A+ L+ EM  + + P  +
Sbjct: 278 LRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTM 337

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+TL  GL  + +++ A+ LF EM       +  TY+  +D LCKN  + EA+ L + +
Sbjct: 338 TYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAI 397

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D+Q YN  IDG+C++G LE A +LF +L  R L  DV T+NIMI GLC  G +
Sbjct: 398 EGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLL 457

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A  LF +M+EN    N   + T+  G ++ NK S+ I+LL +M  +    D S  +++
Sbjct: 458 DEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALL 517

Query: 373 VDLL 376
           V +L
Sbjct: 518 VKML 521



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 184/345 (53%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D A + F +M   +  P +  +  L+  +     ++    L  +M   G+ P V T  +
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C   ++D A  +L  +++   +P+  T++TL+ G C+ GKI  A ++F  M   G
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + + V+Y  L+NG CK++++ EAL+L+ EM++KGI P + TYN+L   L  + + +H  
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            L  EM +  +  +  + N  +D LCK G + EA ++   +     E D+  Y  L+DG 
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGH 276

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C    ++ A+++F  + R   V +VV+YN +I+G C   ++DKA  LF +M    + PN 
Sbjct: 277 CLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNT 336

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + + TLIHG   + +    I L ++M     +P+    S+++D L
Sbjct: 337 MTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYL 381



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 180/361 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    +  ++  + K        +L  +M    I PDV T   +I+  CH N  + A  +
Sbjct: 54  PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G QP   TF  ++  LC  GK+ EA  + D MV    +PN  TY TLM+G C 
Sbjct: 114 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK 173

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++  A  LF  M + G   D  +YN LI+  C   E +   +L  EMV   I P VV+
Sbjct: 174 DRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVS 233

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            N +   L +  +V  A  + + M +  V  D  TY   +DG C    + EAV++F  + 
Sbjct: 234 LNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMV 293

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  ++ +YN LI+G CK  R++ A+ LF  + R+ L+ + +TY+ +IHGLC+ G++ 
Sbjct: 294 RNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQ 353

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  LF +M      PN++ +  L+    + ++ ++ + LL  ++   + PD  + ++ +
Sbjct: 354 DAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAI 413

Query: 374 D 374
           D
Sbjct: 414 D 414



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 180/352 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T   +I+  C    VD A ++  ++      PD  T+ +L+ GLC      EA  +
Sbjct: 89  PDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDV 148

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+ +G QP+VVT+  +M+ LCK+ ++ EA  L   M+ + + P+ FTY++L+   C 
Sbjct: 149 FDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCN 208

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +      L   M       + VS NI+++  CK  +V EA  +   M+  G++P VVT
Sbjct: 209 LCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVT 268

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G     +++ A+K+F+ M R+    +  +YNT I+G CK   I +A+ LF  + 
Sbjct: 269 YAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMC 328

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +   +   Y+ LI GLC  GRL+ A+ LF  +     + ++VTY+I++  LC + ++ 
Sbjct: 329 RQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLA 388

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A  L   +E + + P+V ++   I G  R        +L   +  + + PD
Sbjct: 389 EAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPD 440



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 162/297 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V+ N ++D LCKEG V +A  +   M    + PDVVTY +L+ G C  ++ +EA ++
Sbjct: 229 PNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKV 288

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+  G   +VV++N +++  CK  ++D+A  L + M ++++ PN  TYSTL+ G C 
Sbjct: 289 FDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCH 348

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A  LF  M + G   + V+Y+IL++  CKN  + EA++L + +    + P V  
Sbjct: 349 VGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQV 408

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN    G+     +E A  LF  +    +  D  T+N  I GLCK G + EA +LFR + 
Sbjct: 409 YNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMD 468

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
              C  +   YN +  GL ++ +   A++L   +  R   ADV T  +++  L +DG
Sbjct: 469 ENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDG 525



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/232 (37%), Positives = 135/232 (58%), Gaps = 2/232 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G VC  N V+YNT+I+G CK   +DKA  LF +M  + + P+ +TY++LIHGLCH     
Sbjct: 296 GCVC--NVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQ 353

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  LF EM+  G  P++VT+++++D LCKN ++ EA  LL  +   ++ P+   Y+  +
Sbjct: 354 DAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAI 413

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C  G +  A +LF ++   G + D  ++NI+I G CK   ++EA  L+REM   G  
Sbjct: 414 DGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCL 473

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
               TYNT+  GL + ++   A++L EEM     +AD ST    +  L  +G
Sbjct: 474 RNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDG 525



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 132/263 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTY  ++DG C    +D+A  +F  M       +VV+YN+LI+G C     ++A  
Sbjct: 263 EPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMY 322

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  Q + P+ +T++ ++  LC  G++ +A  L + MV     PN  TYS L+D  C
Sbjct: 323 LFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLC 382

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++  A  L  ++E      D   YNI I+G C+  ++E A  L+  +  +G++P V 
Sbjct: 383 KNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVW 442

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N +  GL +   ++ A KLF EM  +    +  TYNT   GL +N     A++L   +
Sbjct: 443 THNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEM 502

Query: 253 GILKCELDIQAYNCLIDGLCKSG 275
                  D+     L+  L   G
Sbjct: 503 LARGFSADVSTTALLVKMLSDDG 525


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  290 bits (741), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 147/364 (40%), Positives = 223/364 (61%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  + Y TIIDGLCK   +D A  LF +M+ + I P+VVTY+SLI  LC+   W++A R
Sbjct: 253 EPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 312

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+++ + P V TF+ ++D   K GK+ EA +L D MV+R + P+  TYS+L++GFC
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  +++ A+++F  M S  C  D VSY+ LI G+CK K V+E + L+REM  +G+    V
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  GLF+    + A ++F+EM  D V  +  TYNT +DGLCKNG + +A+ +F  L
Sbjct: 433 TYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K E  I  YN +I+G+CK+G++E   +LF +L  + +  DVV YN MI G C  G  
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A  LF +M+E+   PN   + TLI   +R        EL+ +M+      DAS + +V
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612

Query: 373 VDLL 376
            ++L
Sbjct: 613 TNML 616



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 194/352 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VT +++++G C    + +A AL  QM      P+ VT+N+LIHGL   N  +EA  
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVA 207

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+ +G QP +VT+ V+++ LCK G  D A  LL+ M Q  + P    Y+T++DG C
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLC 267

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               ++ A  LF  ME+ G + + V+Y+ LI+  C      +A  L  +M+ + I P V 
Sbjct: 268 KNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++ L     +  ++  A KL++EM +  +     TY++ I+G C +  + EA ++F  +
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D+ +Y+ LI G CK+ R++  +ELFR + +R LV + VTY  +I GL   G  
Sbjct: 388 VSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDC 447

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           D A ++F +M  + V PN++ + TL+ G  +  K  K + +   ++  K+ P
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 159/307 (51%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  LF EM+     PS++ F+ ++  + K  K D    L + M    +  N +TYS L
Sbjct: 63  DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSIL 122

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++ FC   ++  A  + G M  +G + + V+ + L+NGYC +K + EA++L  +M   G 
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P  VT+NTL  GLF  ++   A+ L + M       D  TY   ++GLCK G    A  
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFI 242

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +   K E  +  Y  +IDGLCK+  ++ AL LF+ +  + +  +VVTY+ +I  LC
Sbjct: 243 LLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           N G+   A  L  DM E  + P+V  F  LI  FV+  K  +  +L  +M ++ + P   
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362

Query: 368 IVSMVVD 374
             S +++
Sbjct: 363 TYSSLIN 369



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 126/217 (58%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V+Y+T+I G CK   VD+   LF +M    +  + VTY +LI GL  A D + A+
Sbjct: 392 CFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQ 451

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F EM+  GV P+++T+N ++D LCKNGK+++A  + + + +  + P  +TY+ +++G 
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+    +LF ++   G K D V+YN +I+G+C+    EEA +L++EM   G  P  
Sbjct: 512 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             YNTL          E + +L +EM+    A D ST
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 178/342 (52%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D A ALF +M      P ++ ++ L+  +   N ++    L  +M + G+  +  T+++
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C+  ++  A  +L  M++    PN  T S+L++G+C + +I+ A  L   M   G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + + V++N LI+G   + +  EA++L   MV+KG +P +VTY  +  GL +    + A 
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            L  +M++  +      Y T IDGLCKN ++ +A+ LF+ +       ++  Y+ LI  L
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C  GR   A  L   +  R +  DV T++ +I     +G++ +A  L+ +M + ++ P++
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           + + +LI+GF   ++  +  ++   M  K   PD    S ++
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLI 403



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 145/285 (50%), Gaps = 4/285 (1%)

Query: 94  DELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
           ++L +NG    K+D+A  L   MV+    P+   +S L+       K +    L   M++
Sbjct: 50  EKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN 109

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
           +G  H+  +Y+ILIN +C+  ++  AL++  +M+  G +P +VT ++L  G     ++  
Sbjct: 110 LGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 169

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           A+ L ++M       +T T+NT I GL  +    EAV L   +    C+ D+  Y  +++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVN 229

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           GLCK G  ++A  L   + +  L   V+ Y  +I GLC +  MD A +LF +ME   + P
Sbjct: 230 GLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRP 289

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           NV+ + +LI       + S    LL  M E+K+ PD    S ++D
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  290 bits (741), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 143/365 (39%), Positives = 221/365 (60%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P  V Y+TIID LCK+  + +A +LF  M  + I+P+  TY+SLIHGLC    W EA 
Sbjct: 190 CRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAI 249

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RLF+ M+ + + P  +TFN ++D LCK G + +A  ++D+M+Q D++P+  TY++LMDG 
Sbjct: 250 RLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGH 309

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL  ++ +   +F +M   GC    +SY  LINGYCK + +++A+ L+ EM  +G+ P  
Sbjct: 310 CLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDT 369

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  GL  + ++  A+ LF EM       D  TY    D LCKN  + EA+ L + 
Sbjct: 370 VTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKV 429

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DI  Y+ ++DG+C++G LE A +LF  L  + L  DV TY IMI+GLC  G 
Sbjct: 430 IEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGL 489

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + +A  LF +M+EN  +PN   +  +  GF+R N+  + I+L  +M  +    D S  ++
Sbjct: 490 LAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTL 549

Query: 372 VVDLL 376
           +V++L
Sbjct: 550 LVEML 554



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 187/363 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V ++ ++  + +        +L+ QM    I  +  T N LI+  CH N    A  +
Sbjct: 52  PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 111

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G QPS  TF  ++  LC  GK+ EA +L D M     +P+  TY TL++G C 
Sbjct: 112 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 171

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A     SME   C+   V Y+ +I+  CK++++ EALSL+ +M++KGI P   T
Sbjct: 172 VGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFT 231

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y++L  GL  +   + A++LF  M    +  D  T+NT +D LCK G +V+A  +   + 
Sbjct: 232 YSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMI 291

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+  YN L+DG C    +   + +F ++ R+  V  V++Y  +I+G C    MD
Sbjct: 292 QSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMD 351

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA  LF +M +  + P+ + + TLIHG   + +    I L H+M     +PD     ++ 
Sbjct: 352 KAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILF 411

Query: 374 DLL 376
           D L
Sbjct: 412 DYL 414



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 173/335 (51%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D A +LF +M      P +V ++ L+  +     ++    L+ +M   G+  +  T N+
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C   ++  A  +L  +++   +P+  T++TL+ G C+ GKI  A +LF  M   G
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + D ++Y  LING CK      A+   R M  +  +PTVV Y+T+   L +  Q+  AL
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            LF +M    ++ +  TY++ I GLC  G+  EA+ LF  +   K   D   +N L+D L
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           CK G +  A  +   + +  L  DVVTYN ++ G C   +M K  ++F  M      P+V
Sbjct: 275 CKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSV 334

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           I + TLI+G+ +I    K + L  +M ++ ++PD 
Sbjct: 335 ISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDT 369



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 159/297 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +T+NT++D LCKEG V KA  +   M   ++ PDVVTYNSL+ G C  ++  +   +
Sbjct: 262 PDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNV 321

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+ +G  PSV+++  +++  CK   MD+A  L + M Q+ + P+  TY+TL+ G C 
Sbjct: 322 FDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCH 381

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A  LF  M   G   D V+Y IL +  CKN  + EA+ L + +    + P +  
Sbjct: 382 VGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHI 441

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ +  G+    ++E A  LF ++    +  D  TY   I+GLC+ G + EA +LF  + 
Sbjct: 442 YSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMD 501

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
              C  +   YN +  G  ++     A++LF+ +  R    DV T  +++  L +DG
Sbjct: 502 ENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDG 558



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/229 (37%), Positives = 129/229 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ ++Y T+I+G CK   +DKA  LF +M  + + PD VTYN+LIHGLCH     +A 
Sbjct: 330 CVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAI 389

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+  G  P +VT+ ++ D LCKN ++ EA  LL ++   ++ P+   YS +MDG 
Sbjct: 390 ALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGM 449

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++  A +LF  + S G   D  +Y I+ING C+   + EA  L+ EM   G  P  
Sbjct: 450 CRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNA 509

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            TYN +  G    ++   A++LF+EM     + D ST    ++ L  +G
Sbjct: 510 CTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDG 558



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 132/273 (48%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D+A  L + M++    P+   +S L+         +    L+  M+S G  H+  + NI
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LIN +C    +  A S+  +++  G +P+  T+ TL  GL    ++  AL+LF++M  + 
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              D  TY T I+GLCK G    A+   R++    C   +  Y+ +ID LCK  +L  AL
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            LF  +  + +  +  TY+ +IHGLC  G   +A  LF  M    + P+ + F TL+   
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +     K   ++  M +  + PD    + ++D
Sbjct: 275 CKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMD 307



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 117/240 (48%)

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           I+ A  LF  M  M      V ++ L+    + K     LSLY++M S GI     T N 
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L      ++++  A  +  ++ +      T+T+ T I GLC  G I EA++LF  +    
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            + D+  Y  LI+GLCK G    A+   RS+ +R     VV Y+ +I  LC D Q+ +A 
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            LF DM    ++PN   + +LIHG   +    + I L + M  +K+MPD    + +VD L
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 66/121 (54%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G    P+   Y+ ++DG+C+ G ++ A+ LF ++  + ++PDV TY  +I+GLC      
Sbjct: 432 GTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLA 491

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA +LF EM + G  P+  T+N+I     +N +   A +L   M+ R    +  T + L+
Sbjct: 492 EASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLV 551

Query: 129 D 129
           +
Sbjct: 552 E 552



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 75/173 (43%)

Query: 204 IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQA 263
           ++ ++ AL LF  M R         ++  +  + +  +    + L++ +       +   
Sbjct: 32  VNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYT 91

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
            N LI+  C   RL  A  +   + +        T+  +I GLC +G++ +A  LF  M 
Sbjct: 92  LNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMT 151

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                P+V+ + TLI+G  ++   S  I  L  M+++   P   + S ++D L
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSL 204



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 53/101 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY  +I+GLC++G + +A  LF +M     +P+  TYN +  G    N+   A +L
Sbjct: 472 PDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQL 531

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
           F EM+ +G    V T  ++++ L  +G      ++L   VQ
Sbjct: 532 FQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCEFVQ 572


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  289 bits (740), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 147/364 (40%), Positives = 225/364 (61%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + + V Y TIID LC    V+ A  LF +M  + I P+VVTYNSLI  LC+   W++A R
Sbjct: 236 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 295

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+++ + P+VVTF+ ++D   K GK+ EA +L D M++R + P+ FTYS+L++GFC
Sbjct: 296 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 355

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  +++ A+ +F  M S  C  + V+YN LI G+CK K VEE + L+REM  +G+    V
Sbjct: 356 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 415

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GLF+    + A K+F++M  D V  D  TY+  +DGLCK G + +A+ +F  L
Sbjct: 416 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 475

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K E DI  YN +I+G+CK+G++E   +LF SL  + +  +V+ Y  MI G C  G  
Sbjct: 476 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 535

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A  LF +M+E+   PN   + TLI   +R    +   EL+ +M+    + DAS +SMV
Sbjct: 536 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 595

Query: 373 VDLL 376
           +++L
Sbjct: 596 INML 599



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 195/362 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT +++++G C    + +A AL  QM      P+ VT+N+LIHGL   N  +EA  
Sbjct: 131 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 190

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+ +G QP + T+  +++ LCK G +D A  LL  M +  +  +   Y+T++D  C
Sbjct: 191 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 250

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +N A  LF  M++ G + + V+YN LI   C      +A  L  +M+ + I P VV
Sbjct: 251 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 310

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++ L     +  ++  A KL++EM +  +  D  TY++ I+G C +  + EA  +F  +
Sbjct: 311 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 370

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  ++  YN LI G CK+ R+E  +ELFR + +R LV + VTYN +I GL   G  
Sbjct: 371 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 430

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  +F  M  + V P++I +  L+ G  +  K  K + +   +++ K+ PD    +++
Sbjct: 431 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 490

Query: 373 VD 374
           ++
Sbjct: 491 IE 492



 Score =  167 bits (422), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 159/307 (51%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  LF EM+     PS+V FN ++  + K  K D    L + M    +  + ++Y+ L
Sbjct: 46  DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 105

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++ FC   ++  A  + G M  +G + D V+ + L+NGYC  K + EA++L  +M     
Sbjct: 106 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 165

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P  VT+NTL  GLF  ++   A+ L + M       D  TY T ++GLCK G I  A+ 
Sbjct: 166 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 225

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L + +   K E D+  Y  +ID LC    +  AL LF  +  + +  +VVTYN +I  LC
Sbjct: 226 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 285

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           N G+   A  L  DM E  + PNV+ F  LI  FV+  K  +  +L  +M ++ + PD  
Sbjct: 286 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 345

Query: 368 IVSMVVD 374
             S +++
Sbjct: 346 TYSSLIN 352



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 132/235 (56%), Gaps = 4/235 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYNT+I G CK   V++   LF +M    +  + VTYN+LI GL  A D + A+
Sbjct: 375 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 434

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++F +M+  GV P ++T+++++D LCK GK+++A  + + + +  + P+ +TY+ +++G 
Sbjct: 435 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 494

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+    +LF S+   G K + + Y  +I+G+C+    EEA +L+REM   G  P  
Sbjct: 495 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 554

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI----DGLCKNGYI 242
            TYNTL            + +L +EM+      D ST +  I    DG  +  Y+
Sbjct: 555 GTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYL 609



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 170/334 (50%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D A  LF +M      P +V +N L+  +   N ++    L   M +  +   + ++N+
Sbjct: 45  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C+  ++  A  +L  M++    P+  T S+L++G+C   +I+ A  L   M  M 
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + + V++N LI+G   + +  EA++L   MV++G +P + TY T+  GL +   ++ AL
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            L ++M++  + AD   Y T ID LC    + +A+ LF  +       ++  YN LI  L
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 284

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C  GR   A  L   +  R +  +VVT++ +I     +G++ +A  L+ +M + ++ P++
Sbjct: 285 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 344

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             + +LI+GF   ++  +   +   M  K   P+
Sbjct: 345 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 378



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 143/274 (52%)

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K+D+A  L   MVQ    P+   ++ L+       K +    L   M+++   +D  SYN
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           ILIN +C+  ++  AL++  +M+  G +P +VT ++L  G     ++  A+ L ++M   
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
           +   +T T+NT I GL  +    EAV L   +    C+ D+  Y  +++GLCK G +++A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           L L + + +  + ADVV Y  +I  LCN   ++ A +LF +M+   + PNV+ + +LI  
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
                + S    LL  M E+K+ P+    S ++D
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVVTFSALID 317


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  289 bits (739), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 147/364 (40%), Positives = 225/364 (61%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + + V Y TIID LC    V+ A  LF +M  + I P+VVTYNSLI  LC+   W++A R
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+++ + P+VVTF+ ++D   K GK+ EA +L D M++R + P+ FTYS+L++GFC
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  +++ A+ +F  M S  C  + V+YN LI G+CK K VEE + L+REM  +G+    V
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GLF+    + A K+F++M  D V  D  TY+  +DGLCK G + +A+ +F  L
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K E DI  YN +I+G+CK+G++E   +LF SL  + +  +V+ Y  MI G C  G  
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A  LF +M+E+   PN   + TLI   +R    +   EL+ +M+    + DAS +SMV
Sbjct: 552 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611

Query: 373 VDLL 376
           +++L
Sbjct: 612 INML 615



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 195/362 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT +++++G C    + +A AL  QM      P+ VT+N+LIHGL   N  +EA  
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+ +G QP + T+  +++ LCK G +D A  LL  M +  +  +   Y+T++D  C
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 266

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +N A  LF  M++ G + + V+YN LI   C      +A  L  +M+ + I P VV
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++ L     +  ++  A KL++EM +  +  D  TY++ I+G C +  + EA  +F  +
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  ++  YN LI G CK+ R+E  +ELFR + +R LV + VTYN +I GL   G  
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  +F  M  + V P++I +  L+ G  +  K  K + +   +++ K+ PD    +++
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506

Query: 373 VD 374
           ++
Sbjct: 507 IE 508



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 159/307 (51%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  LF EM+     PS+V FN ++  + K  K D    L + M    +  + ++Y+ L
Sbjct: 62  DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++ FC   ++  A  + G M  +G + D V+ + L+NGYC  K + EA++L  +M     
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P  VT+NTL  GLF  ++   A+ L + M       D  TY T ++GLCK G I  A+ 
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L + +   K E D+  Y  +ID LC    +  AL LF  +  + +  +VVTYN +I  LC
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           N G+   A  L  DM E  + PNV+ F  LI  FV+  K  +  +L  +M ++ + PD  
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361

Query: 368 IVSMVVD 374
             S +++
Sbjct: 362 TYSSLIN 368



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 132/235 (56%), Gaps = 4/235 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYNT+I G CK   V++   LF +M    +  + VTYN+LI GL  A D + A+
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++F +M+  GV P ++T+++++D LCK GK+++A  + + + +  + P+ +TY+ +++G 
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+    +LF S+   G K + + Y  +I+G+C+    EEA +L+REM   G  P  
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 570

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI----DGLCKNGYI 242
            TYNTL            + +L +EM+      D ST +  I    DG  +  Y+
Sbjct: 571 GTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYL 625



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 170/334 (50%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D A  LF +M      P +V +N L+  +   N ++    L   M +  +   + ++N+
Sbjct: 61  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C+  ++  A  +L  M++    P+  T S+L++G+C   +I+ A  L   M  M 
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + + V++N LI+G   + +  EA++L   MV++G +P + TY T+  GL +   ++ AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            L ++M++  + AD   Y T ID LC    + +A+ LF  +       ++  YN LI  L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C  GR   A  L   +  R +  +VVT++ +I     +G++ +A  L+ +M + ++ P++
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             + +LI+GF   ++  +   +   M  K   P+
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394



 Score =  141 bits (355), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 143/274 (52%)

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K+D+A  L   MVQ    P+   ++ L+       K +    L   M+++   +D  SYN
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           ILIN +C+  ++  AL++  +M+  G +P +VT ++L  G     ++  A+ L ++M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
           +   +T T+NT I GL  +    EAV L   +    C+ D+  Y  +++GLCK G +++A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           L L + + +  + ADVV Y  +I  LCN   ++ A +LF +M+   + PNV+ + +LI  
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
                + S    LL  M E+K+ P+    S ++D
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  289 bits (739), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 142/365 (38%), Positives = 225/365 (61%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ V Y +IID LCK+  V +A  LF +M G+ I+PD+ TY SLIH LC+  +W    
Sbjct: 203 CQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVT 262

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +M++  + P VV F+ ++D LCK GK+ EA  ++D+M+ R V PN  TY+ LMDG 
Sbjct: 263 TLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGH 322

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL  +++ A ++F +M   G   + +SYN LINGYCK + +++A  L+ EM  K + P  
Sbjct: 323 CLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNT 382

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  GL  + +++ A+ LF EM       D +TY   +D LCK  ++ EA+ L +T
Sbjct: 383 VTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKT 442

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DIQ Y  +IDG+C++G LE A ++F +L  + L  +V TY IMI+GLC  G 
Sbjct: 443 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGL 502

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A+ LF++M+ N  +P+   + T+  G ++  +  + I+LL +M  +    D S  ++
Sbjct: 503 LDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTL 562

Query: 372 VVDLL 376
           +V++L
Sbjct: 563 LVEML 567



 Score =  224 bits (570), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 191/363 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TV +N ++  + K        +L  QM    I PDV T N LI+  CH N    A  +
Sbjct: 65  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G+QP   TF  ++  LC  GK+ +A  L D M+    +PN  TY TL++G C 
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  N A  L  SME   C+ D V Y  +I+  CK+++V EA +L+ +MV +GI P + T
Sbjct: 185 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 244

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +L   L  + + +H   L  +M    +  D   ++T +D LCK G I EA ++   + 
Sbjct: 245 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 304

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           I   E ++  YN L+DG C    ++ A+++F ++       +V++YN +I+G C   +MD
Sbjct: 305 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 364

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA  LF +M +  + PN + + TL+HG   + +    I L H+M     +PD +   +++
Sbjct: 365 KATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILL 424

Query: 374 DLL 376
           D L
Sbjct: 425 DYL 427



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 169/302 (55%), Gaps = 1/302 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V ++T++D LCKEG + +A  +   M    + P+VVTYN+L+ G C  ++ +EA ++
Sbjct: 275 PDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKV 334

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+  G  P+V+++N +++  CK  +MD+A+ L + M Q+++ PN  TY+TLM G C 
Sbjct: 335 FDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCH 394

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A  LF  M + G   D  +Y IL++  CK   ++EA++L + +    + P +  
Sbjct: 395 VGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQI 454

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  +  G+    ++E A  +F  +    +  +  TY   I+GLC+ G + EA +LF  + 
Sbjct: 455 YTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMD 514

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D   YN +  GL ++     A++L + +  R   ADV T  +++  LC+D ++D
Sbjct: 515 GNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDD-KLD 573

Query: 314 KA 315
           ++
Sbjct: 574 QS 575



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 136/260 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTYN ++DG C +  +D+A  +F  M      P+V++YN+LI+G C     ++A  
Sbjct: 309 EPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATY 368

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  + + P+ VT+N +M  LC  G++ +A  L   MV     P+  TY  L+D  C
Sbjct: 369 LFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLC 428

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               ++ A  L  ++E      D   Y I+I+G C+  E+E A  ++  + SKG++P V 
Sbjct: 429 KKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVR 488

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  +  GL     ++ A KLF EM  +  + D  TYNT   GL +N   + A++L + +
Sbjct: 489 TYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEM 548

Query: 253 GILKCELDIQAYNCLIDGLC 272
                  D+     L++ LC
Sbjct: 549 LARGFSADVSTTTLLVEMLC 568



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 167/353 (47%), Gaps = 40/353 (11%)

Query: 54  YNSLIHGLCHA-----NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           ++SL H   H+     N  ++A   F  M+     PS V FN ++  + K  +      L
Sbjct: 30  FSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSL 89

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
            + M    + P+ +T + L++ FC   +   A  +   +  +G + D  ++  LI G C 
Sbjct: 90  SNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCV 149

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             ++ +AL L+ +M+ +G +P VVTY TL  GL ++     A++L   M++ +   D   
Sbjct: 150 EGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVV 209

Query: 229 YNTFIDGLCKNGYIVEAVELFRTL---GILK---------------CEL----------- 259
           Y + ID LCK+  + EA  LF  +   GI                 CE            
Sbjct: 210 YTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI 269

Query: 260 ------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+  ++ ++D LCK G++  A ++   +  R +  +VVTYN ++ G C   +MD
Sbjct: 270 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMD 329

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +A  +F  M  N  APNVI + TLI+G+ +I +  K   L  +M +K+++P+ 
Sbjct: 330 EAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNT 382



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 131/273 (47%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D+A    + M+     P+   ++ L+     T +      L   M+S G   D  + NI
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LIN +C       A S+  +++  G++P   T+ TL  GL    ++  AL LF++M  + 
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              +  TY T I+GLCK G    A+ L R++    C+ D+  Y  +ID LCK  ++  A 
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            LF  +  + +  D+ TY  +IH LCN  +      L   M  + + P+V+IF T++   
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +  K ++  +++  M  + V P+    + ++D
Sbjct: 288 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMD 320



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 92/170 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY  ++D LCK+  +D+A AL   ++G N++PD+  Y  +I G+C A +   A+ +
Sbjct: 415 PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 474

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  +  +G++P+V T+ ++++ LC+ G +DEA++L   M      P+  TY+T+  G   
Sbjct: 475 FSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQ 534

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
             +  RA +L   M + G   D  +  +L+   C +K  +    +  E V
Sbjct: 535 NKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFV 584



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 75/185 (40%)

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +++N         + ++ AL  F  M        T  +N  +  + K         L   
Sbjct: 33  LSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQ 92

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D+   N LI+  C   R   A  +   + +  L  D  T+  +I GLC +G+
Sbjct: 93  MDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGK 152

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +  A  LF  M      PNV+ + TLI+G  ++   +  I LL  M++    PD  + + 
Sbjct: 153 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 212

Query: 372 VVDLL 376
           ++D L
Sbjct: 213 IIDSL 217



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 1/95 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TY  +I+GLC+ G +D+A  LF++M G   +PD  TYN++  GL    +   A +
Sbjct: 484 RPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQ 543

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR 107
           L  EM+ +G    V T  ++++ LC + K+D++ +
Sbjct: 544 LLQEMLARGFSADVSTTTLLVEMLCDD-KLDQSVK 577


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  288 bits (738), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 143/359 (39%), Positives = 216/359 (60%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN VTYN +ID LCK+  V++A  +F  MK + I+PD+ TYNSLI GLC+   W EA 
Sbjct: 231 CQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEAS 290

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM    + P++ TFNV++D +CK GK+ EA  +   M +  V P+  TYS+LM G+
Sbjct: 291 ALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGY 350

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            L  +I  A +LF +M + GCK D  SYNILI GYCK K ++EA  L+ EM+ +G+ P  
Sbjct: 351 SLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDN 410

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YNTL  GL ++ ++  A  LF+ M  +    D  TY+  +DG CK GY+ +A  LFR 
Sbjct: 411 VNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRV 470

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DI  YN LID +CK G L+ A +LF  L  + L+ +V  Y  +I+ LC +G 
Sbjct: 471 MQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGL 530

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +D+A + F +ME +   P+   +  +I GF++    S+  +L+ +M+++  + +A   +
Sbjct: 531 LDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTT 589



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 198/399 (49%), Gaps = 36/399 (9%)

Query: 14  PNTVTYNTIIDGLCKEG-FVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           P  + +  ++  + K G +     +L  QM+   ++PD+ T + LI    H    + A  
Sbjct: 92  PCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFS 151

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +M+  G+QP  VTFN +++ LCK GK  +A    D       +P  +TY+T+++G C
Sbjct: 152 VFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLC 211

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+   A  LF  ME  GC+ + V+YNILI+  CK+K V EAL ++  M +K I P + 
Sbjct: 212 KIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIF 271

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  GL    + + A  L  EM   ++  +  T+N  +D +CK G + EA  +F+T+
Sbjct: 272 TYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTM 331

Query: 253 GILK-----------------------------------CELDIQAYNCLIDGLCKSGRL 277
             +                                    C+ D  +YN LI G CK+ R+
Sbjct: 332 TEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRI 391

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A +LF  +  + L  D V YN +IHGLC  G++ +A DLF +M  N   P++  +  L
Sbjct: 392 DEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSML 451

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + GF +     K   L   M+   + PD ++ ++++D +
Sbjct: 452 LDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAM 490



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 1/175 (0%)

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG-YIVEAVELFRTLGILKCELDI 261
               ++ AL  F  M   +       +   +  + K G Y    + L + + +     DI
Sbjct: 71  SFRNIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDI 130

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
              + LID      R+++A  +F  + +  L  D VT+N +I+GLC  G+  +A + F D
Sbjct: 131 YTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDD 190

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            E +   P V  + T+I+G  +I + +    L  KM+E    P+    ++++D L
Sbjct: 191 FEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSL 245


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  288 bits (737), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 145/359 (40%), Positives = 217/359 (60%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN VTY+TIID   K+  V++A  +F  MK + I+PD+ TYNSLI GLC+ + W EA 
Sbjct: 234 CQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEAS 293

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM    + P +VTFNV++D +CK GK+ EA  +L  M +  V P+  TYS+LM G+
Sbjct: 294 ALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGY 353

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            L  ++  A +LF +M + GCK D  SYNILINGYCK K ++EA  L+ EM+ +G+ P  
Sbjct: 354 SLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNN 413

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+YNTL  GL ++  +  A  LF+ M  +    +  TY+  +DG CK GY  +A  LFR 
Sbjct: 414 VSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRA 473

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + ++  YN LID +CKSG L  A +LF  L  + L  +   Y  +I+GLC +G 
Sbjct: 474 MQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGL 533

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +D+A + F +MEE+   P+ I +  +I GF+     S+ ++L+ +M++K  + D    +
Sbjct: 534 LDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGTTA 592



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 202/399 (50%), Gaps = 36/399 (9%)

Query: 14  PNTVTYNTIIDGLCKEG-FVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           P  + +  ++  + K G + D   +L  QM+   ++P++ T + LI+   H    + A  
Sbjct: 95  PCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFS 154

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +++  G+QP++VTF  +++ LCK GK  +A  L D MV R  RP+ +TY+T+++G C
Sbjct: 155 VLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLC 214

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+   A  L   ME  GC+ + V+Y+ +I+ + K++ V EAL ++  M  KGI P + 
Sbjct: 215 KIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIF 274

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY----------- 241
           TYN+L  GL    Q + A  L  EM+  ++  D  T+N  +D +CK G            
Sbjct: 275 TYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTM 334

Query: 242 ------------------------IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
                                   +VEA +LF  +    C+ D+ +YN LI+G CK  R+
Sbjct: 335 TEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRI 394

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A +LF  +  + L  + V+YN +IHGLC  G + +A +LF +M  N   PN+  +  L
Sbjct: 395 DEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSIL 454

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + GF +     K   L   M+     P+  + ++++D +
Sbjct: 455 LDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAM 493


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  288 bits (737), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 141/366 (38%), Positives = 224/366 (61%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           + KP+T  YN +ID  CK+G +D A +L  +MK +NI PD++TY SLI GL   + W + 
Sbjct: 208 ITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKV 267

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           + LF EM+   + P V TFN ++D LCK GK+++A  ++  M+++ V PN  TY+ +MDG
Sbjct: 268 RTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDG 327

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +CL G++ RA  +F SM   G + D +SY  LINGY + K++++A+ L+RE+   G+KP+
Sbjct: 328 YCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPS 387

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           +VT + L  GLFE+ + E A   F+EMQ      +  T+ T + G  KNG + EA+  F 
Sbjct: 388 IVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFH 447

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            L   + + +IQ Y  +I+GLCK+G+L+ A   F  LP   L  DV+TY  MI G C +G
Sbjct: 448 KLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEG 507

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            +D+A D+   ME+N   P+   +  ++ GF R +K S++   L ++  K    +A+ V 
Sbjct: 508 LLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVE 567

Query: 371 MVVDLL 376
           +++D++
Sbjct: 568 LLMDII 573



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 168/326 (51%), Gaps = 1/326 (0%)

Query: 52  VTYNSLIHGLCHANDWNEAKRLFFEMMDQGV-QPSVVTFNVIMDELCKNGKMDEASRLLD 110
           VT+ +LI GL   N   +A  LF +++ + + +P  V +  +MD LCK G   +A  LL 
Sbjct: 143 VTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLR 202

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
           LM Q   +P+   Y+ ++D FC  G ++ A  L   M+      D ++Y  LI+G  K  
Sbjct: 203 LMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLS 262

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
           + E+  +L+ EM+   I P V T+N++  GL +  +VE A ++   M    V  +  TYN
Sbjct: 263 QWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYN 322

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
             +DG C  G +  A  +F ++     E DI +Y  LI+G  +  +++ A++LFR + + 
Sbjct: 323 VVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQN 382

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
            L   +VT ++++ GL   G+ + A   F +M+     PN+    TL+ G+ +     + 
Sbjct: 383 GLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEA 442

Query: 351 IELLHKMKEKKVMPDASIVSMVVDLL 376
           +   HK++ ++   +  I + V++ L
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVINGL 468



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 167/345 (48%), Gaps = 3/345 (0%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D A +LF QM      P  V+++ L+  L H   ++    +F E+    +       + 
Sbjct: 53  LDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALST 112

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C   + D    +L +  ++ +  N  T++TL+ G     K+  A  LF  +    
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 152 -CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
            C+ D+V Y  +++G CK    ++A  L R M     KP    YN +     +   ++ A
Sbjct: 173 ICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGA 232

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
             L  EM++ ++  D  TY + IDGL K     +   LF  +  L    D+  +N +IDG
Sbjct: 233 TSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDG 292

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LCK G++E A E+   +  + +  + +TYN+++ G C  GQM +A  +F  M +  + P+
Sbjct: 293 LCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPD 352

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
           +I +  LI+G+V   K  K ++L  ++ +  + P  SIV+  V L
Sbjct: 353 IISYTALINGYVEKKKMDKAMQLFREISQNGLKP--SIVTCSVLL 395



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 153/299 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+N++IDGLCKEG V+ A+ +   M  + + P+ +TYN ++ G C       A+R+
Sbjct: 281 PDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRI 340

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+D+G++P ++++  +++   +  KMD+A +L   + Q  ++P+  T S L+ G   
Sbjct: 341 FDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFE 400

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A+  F  M++ G   +  ++  L+ GY KN  VEEA+S + ++  +     +  
Sbjct: 401 VGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQI 460

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  +  GL +  +++ A   FE++    +  D  TY   I G C+ G + EA ++ R + 
Sbjct: 461 YTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKME 520

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              C  D + YN ++ G  +S ++       + +  +    +  T  +++  +  D  +
Sbjct: 521 DNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMDIIAEDPSL 579



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 127/272 (46%), Gaps = 35/272 (12%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +TYN ++DG C  G + +A+ +F  M  + I PD+++Y +LI+G       ++A +
Sbjct: 315 EPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQ 374

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF- 131
           LF E+   G++PS+VT +V++  L + G+ + A    D M      PN +T+ TL+ G+ 
Sbjct: 375 LFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYF 434

Query: 132 ----------------------------------CLTGKINRAEELFGSMESMGCKHDDV 157
                                             C  GK+++A   F  +  +G   D +
Sbjct: 435 KNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVI 494

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y  +I+GYC+   ++EA  + R+M   G  P   TYN +  G F   +V       +E+
Sbjct: 495 TYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEI 554

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
                + + +T    +D + ++  ++  +  F
Sbjct: 555 AGKSFSFEAATVELLMDIIAEDPSLLNMIPEF 586



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 109/243 (44%), Gaps = 36/243 (14%)

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE------------- 216
           K +++A SL+R+MV+    P+ V+++ L   L  +      + +F E             
Sbjct: 51  KCLDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFAL 110

Query: 217 ---------MQRDD-------------VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
                    M R D             +  +  T+ T I GL     + +AV LF+ L  
Sbjct: 111 STVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVR 170

Query: 255 LK-CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              CE D   Y  ++DGLCK G  + A +L R + + +   D   YNI+I   C DG +D
Sbjct: 171 ENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLD 230

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L  +M++  + P++I + +LI G  ++++  KV  L  +M    + PD    + V+
Sbjct: 231 GATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVI 290

Query: 374 DLL 376
           D L
Sbjct: 291 DGL 293


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  287 bits (735), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 141/364 (38%), Positives = 225/364 (61%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPNT TY  +ID  CK+G +D A +L  +MK ++I PD+ TY++LI  LC  + W   + 
Sbjct: 210 KPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRT 269

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM+   + P+V TFN ++D LCK GK+++A  ++  M+++ V P+  TY+ ++DG+ 
Sbjct: 270 LFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYG 329

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G+++RA E+F SM +   + D +SYNILINGY + K+++EA+ + RE+  KG+KP++V
Sbjct: 330 LRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIV 389

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T N L  GLFE+ + + A   F+EM       D  T+ T + G  KNG + EA+  F  L
Sbjct: 390 TCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKL 449

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + + +IQ Y  +IDGLCK+G+L+ A   F  LP   L  DV+TY  MI G C +G +
Sbjct: 450 ERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLL 509

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A D+   ME+N    +   +  ++ GF+R NK S++   L ++  K    +A+ V ++
Sbjct: 510 DEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELL 569

Query: 373 VDLL 376
           +D++
Sbjct: 570 MDII 573



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 170/326 (52%), Gaps = 1/326 (0%)

Query: 52  VTYNSLIHGLCHANDWNEAKRLFFEMMDQGV-QPSVVTFNVIMDELCKNGKMDEASRLLD 110
           VT+ +LI GL   N   +A  LF +++ + + +P+ V +  +M+ LCK G   +A  LL 
Sbjct: 143 VTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLR 202

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
           LM Q   +PN  TY+ ++D FC  G ++ A  L   M+      D  +Y+ LI+  CK  
Sbjct: 203 LMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLS 262

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
           + E   +L+ EM+   I P V T+N++  GL +  +VE A ++   M    V  D  TYN
Sbjct: 263 QWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYN 322

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
             IDG    G +  A E+F ++     E DI +YN LI+G  +  +++ A+++ R + ++
Sbjct: 323 MIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQK 382

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
            L   +VT N+++HGL   G+   A + F +M      P++    TL+ G+ +     + 
Sbjct: 383 GLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEA 442

Query: 351 IELLHKMKEKKVMPDASIVSMVVDLL 376
           +   HK++ ++   +  I + V+D L
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVIDGL 468



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 169/340 (49%), Gaps = 3/340 (0%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D A +LF QM      P V +++ L+  + H   ++    LF E+    +       ++
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C   + D    +L +  ++ +  N  T++TL+ G     K+  A  LF  +    
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 152 -CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
            C+ ++V Y  ++NG CK    ++A  L R M     KP   TY  +     +   ++ A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGA 232

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
             L  EM++  +  D  TY+T ID LCK         LF  +  L    ++  +N +IDG
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LCK G++E A E+ R +  + +  DV+TYN++I G    GQ+D+A ++F  M   ++ P+
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPD 352

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +I +  LI+G+ R  K  + +++  ++ +K + P  SIV+
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGLKP--SIVT 390



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 131/274 (47%), Gaps = 1/274 (0%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D+A  L   MV+    P+  ++S L+         +    LF  +  +     +   +I
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           ++N  C     +   S+      KGI    VT+ TL  GLF  ++V+ A+ LF+++ R++
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 222 VAADTST-YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
           +       Y T ++GLCK G+  +A +L R +     + + + Y  +ID  CK G L+ A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGA 232

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
             L   + ++ +  D+ TY+ +I  LC   Q +    LFL+M    + PNV  F ++I G
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +  K     E++  M EK V PD    +M++D
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIID 326



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 11/213 (5%)

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
           K +++A SL+R+MV     P+V +++ L   +  +      + LF E+ +  +       
Sbjct: 51  KCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFIL 110

Query: 230 NTFIDGLC-----KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           +  ++  C       G+ V A+   +  GI   E+    +  LI GL    +++ A+ LF
Sbjct: 111 SIVVNSCCLMHRTDLGFSVLAIHFKK--GIPYNEV---TFTTLIRGLFAENKVKDAVHLF 165

Query: 285 RSLPRR-VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           + L R  +   + V Y  +++GLC  G   KA DL   ME+ +  PN   +  +I  F +
Sbjct: 166 KKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCK 225

Query: 344 INKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                    LL++MK+K + PD    S ++D L
Sbjct: 226 DGMLDGATSLLNEMKQKSIPPDIFTYSTLIDAL 258


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  286 bits (733), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 146/364 (40%), Positives = 219/364 (60%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+ V YNT+ID LCK+   ++A   F +M  + I P+VVTY+S++HG C+    NEA 
Sbjct: 207 CKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEAT 266

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF +M+ + V P+ VTF +++D LCK G + EA R+ ++M +  V P+A+TYS LMDG+
Sbjct: 267 SLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGY 326

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL  +++ A++LF  M   G       YNILING+CK++ + EA +L  EM  + + P  
Sbjct: 327 CLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDT 386

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+TL  G  +  + + A KLF+EM    +  D+ TY+  +DGLCK+G++ EA  L + 
Sbjct: 387 VTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKA 446

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   K E  I  YN LI G+C  G+LE A ELF +L  + +   VVTY +MI GL  +G 
Sbjct: 447 MQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGL 506

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            ++A ++F  M  N   PN   +   I GF+R   PS  + L+ +M  +    D+S   M
Sbjct: 507 SNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQM 566

Query: 372 VVDL 375
           ++DL
Sbjct: 567 LLDL 570



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 203/378 (53%), Gaps = 2/378 (0%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           +A+ N  +G+   P  V +N ++  L K+       +L  QM   NI P+V T   LI+ 
Sbjct: 54  VASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINC 113

Query: 61  LCHAN--DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR 118
           LCH+N    + A     +M   G+QP+ VTF  +++ LC   K+ +A +L D + +    
Sbjct: 114 LCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFA 173

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           P+  TY+T++ G C  G    A +L   ME  GCK D V+YN +I+  CK++   EA+  
Sbjct: 174 PSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYF 233

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
           + EMV +GI P VVTY+++  G   + Q+  A  LF++M   +V  +T T+   +DGLCK
Sbjct: 234 FSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCK 293

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
            G I+EA  +F  +     E D   Y+ L+DG C   +++ A +LF  +  +     V  
Sbjct: 294 EGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRV 353

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           YNI+I+G C   ++++A  L  +M +  + P+ + + TL+ GF +  +P    +L  +M 
Sbjct: 354 YNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMC 413

Query: 359 EKKVMPDASIVSMVVDLL 376
              ++PD+   S+++D L
Sbjct: 414 SYGLLPDSITYSILLDGL 431



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 190/361 (52%), Gaps = 2/361 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VT+ T+++GLC +  +  A  LF ++      P ++TY ++I GLC       A +
Sbjct: 138 QPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQ 197

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M ++G +P VV +N ++D LCK+ + +EA      MV + + PN  TYS+++ GFC
Sbjct: 198 LLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFC 257

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++N A  LF  M       + V++ IL++G CK   + EA  ++  M   G++P   
Sbjct: 258 NLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAY 317

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L  G     Q++ A KLF+ M     A     YN  I+G CK+  + EA  L   +
Sbjct: 318 TYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEM 377

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D   Y+ L+ G C++GR ++A +LF+ +    L+ D +TY+I++ GLC  G +
Sbjct: 378 YDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHL 437

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A  L   M+E+ + P++ I+  LI G     K     EL   +  K + P  S+V+  
Sbjct: 438 DEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQP--SVVTYT 495

Query: 373 V 373
           V
Sbjct: 496 V 496



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 107/302 (35%), Positives = 167/302 (55%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           IG    PNTVT+  ++DGLCKEG + +A+ +F  M    + PD  TY++L+ G C  +  
Sbjct: 273 IGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQM 332

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +EA++LF  M+ +G  PSV  +N++++  CK+ +++EA  LL  M  RD+ P+  TYSTL
Sbjct: 333 DEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTL 392

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           M GFC  G+   A++LF  M S G   D ++Y+IL++G CK+  ++EA  L + M    I
Sbjct: 393 MQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKI 452

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P +  YN L  G+    ++E A +LF  +    +     TY   I GL K G   EA E
Sbjct: 453 EPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACE 512

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +FR + +  C  +   YN  I G  ++G    A+ L   +  R   AD  T+ +++    
Sbjct: 513 MFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDLES 572

Query: 308 ND 309
           ND
Sbjct: 573 ND 574



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 2/195 (1%)

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
           +  I P+ +T          +H V  A+  F ++           +N  +  L K  +  
Sbjct: 27  TTNISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYS 86

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGR--LEIALELFRSLPRRVLVADVVTYNI 301
             + L + + +     ++     LI+ LC S R  +  A      + +  L    VT+  
Sbjct: 87  TVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGT 146

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +++GLC+  ++  A  LF ++ +   AP++I + T+I G  +I   +  ++LL KM+EK 
Sbjct: 147 LLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKG 206

Query: 362 VMPDASIVSMVVDLL 376
             PD    + V+D L
Sbjct: 207 CKPDVVAYNTVIDSL 221


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  286 bits (732), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 150/364 (41%), Positives = 220/364 (60%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN VTY+TIID LCK+  V+ A     +M    I P+V TYNS++HG C+    NEA 
Sbjct: 229 CKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEAT 288

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RLF EM+ + V P+ VTF +++D LCK G + EA  + + M ++ V P+  TY+ LMDG+
Sbjct: 289 RLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGY 348

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL   +N A+++F  M   GC     SYNILINGYCK++ ++EA SL  EM  K + P  
Sbjct: 349 CLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDT 408

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+TL  GL ++ + + AL LF+EM       +  TY   +DG CK+G++ EA++L ++
Sbjct: 409 VTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKS 468

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   K E +I  Y  LI+G+  +G+LE+A ELF  L       D+ TY +MI GL  +G 
Sbjct: 469 MKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGL 528

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D+A+DLF  ME++   PN   +  +I GF++    S  I L+ +M  K+   + S   M
Sbjct: 529 SDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQM 588

Query: 372 VVDL 375
           ++DL
Sbjct: 589 LLDL 592



 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 194/362 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V +   +    K+       +L  QM    +  +V + N LI+ LC  N  + +  
Sbjct: 90  RPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVS 149

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M   G+ P  +TFN +++ LC  GK+ EA  L + MV+R   PN  +Y+T+++G C
Sbjct: 150 VLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLC 209

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            TG  + A ++F  ME  GCK + V+Y+ +I+  CK++ V +A+    EMV +GI P V 
Sbjct: 210 KTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVF 269

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN++  G   + Q+  A +LF+EM   DV  +T T+   +DGLCK G + EA  +F T+
Sbjct: 270 TYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETM 329

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                E DI  YN L+DG C    +  A ++F  + R+       +YNI+I+G C   +M
Sbjct: 330 TEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRM 389

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A  L  +M   A+ P+ + + TL+ G  ++ +P + + L  +M      P+     ++
Sbjct: 390 DEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVIL 449

Query: 373 VD 374
           +D
Sbjct: 450 LD 451



 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 119/351 (33%), Positives = 191/351 (54%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  + N +I+ LC+   VD + ++  +M    I+PD +T+N+LI+GLC+     EA  LF
Sbjct: 127 NVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELF 186

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ +G +P+V+++  +++ LCK G    A  +   M Q   +PN  TYST++D  C  
Sbjct: 187 NEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKD 246

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
             +N A E    M   G   +  +YN +++G+C   ++ EA  L++EMV + + P  VT+
Sbjct: 247 RLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTF 306

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  GL +   V  A  +FE M    V  D STYN  +DG C    + EA ++F  +  
Sbjct: 307 TILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIR 366

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C     +YN LI+G CKS R++ A  L   +  + L  D VTY+ ++ GLC  G+  +
Sbjct: 367 KGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKE 426

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           A +LF +M      PN++ +V L+ GF +     + ++LL  MKEKK+ P+
Sbjct: 427 ALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPN 477



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 167/299 (55%), Gaps = 6/299 (2%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G    PNTVT+  ++DGLCKEG V +A+ +F  M  + + PD+ TYN+L+ G C     
Sbjct: 295 VGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLM 354

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           NEAK++F  M+ +G  P   ++N++++  CK+ +MDEA  LL  M  + + P+  TYSTL
Sbjct: 355 NEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTL 414

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           M G C  G+   A  LF  M S G   + V+Y IL++G+CK+  ++EAL L + M  K +
Sbjct: 415 MQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKL 474

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P +V Y  L  G+F   ++E A +LF ++  D    D  TY   I GL K G   EA +
Sbjct: 475 EPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYD 534

Query: 248 LFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           LFR +   G L    +  +YN +I G  ++     A+ L   +  +    ++ T+ +++
Sbjct: 535 LFRKMEDDGFLP---NSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 160/310 (51%), Gaps = 6/310 (1%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A   F+ M+    +PSVV F   +    K  +      L + M    V  N ++ + L
Sbjct: 75  DDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNIL 134

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++  C    ++ +  + G M  +G   D +++N LING C   +++EA+ L+ EMV +G 
Sbjct: 135 INCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGH 194

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P V++Y T+  GL +      A+ +F++M+++    +  TY+T ID LCK+  + +A+E
Sbjct: 195 EPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAME 254

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
               +       ++  YN ++ G C  G+L  A  LF+ +  R ++ + VT+ I++ GLC
Sbjct: 255 FLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLC 314

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV---RINKPSKVIELLHKMKEKKVMP 364
            +G + +A  +F  M E  V P++  +  L+ G+     +N+  KV E+   M  K   P
Sbjct: 315 KEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEI---MIRKGCAP 371

Query: 365 DASIVSMVVD 374
            A   +++++
Sbjct: 372 GAHSYNILIN 381



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 139/273 (50%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D+A      MV+ + RP+   +   +  F    + +    L   M+     H+  S NI
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LIN  C+   V+ ++S+  +M   GI P  +T+N L  GL    +++ A++LF EM +  
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              +  +Y T I+GLCK G    AV++F+ +    C+ ++  Y+ +ID LCK   +  A+
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           E    +  R +  +V TYN ++HG CN GQ+++A  LF +M    V PN + F  L+ G 
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +    S+   +   M EK V PD S  + ++D
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMD 346



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 85/170 (50%)

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           V+ AL  F  M R +       +  F+    K       V L   + + +   ++ + N 
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LI+ LC+   ++ ++ +   + +  +  D +T+N +I+GLCN+G++ +A +LF +M +  
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             PNVI + T+I+G  +    S  +++  KM++    P+    S ++D L
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSL 243


>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Cucumis sativus]
          Length = 481

 Score =  286 bits (731), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 155/356 (43%), Positives = 222/356 (62%), Gaps = 9/356 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLI---HGLCHANDWNEA 70
           P+  T N + + LC    V +  A    +      PD+VTYN+LI   +GLC     +EA
Sbjct: 123 PDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEA 182

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           K +F EM  QG+ P+V++++ ++   C  GK++E+ RL + MV + V+PN   ++ L+D 
Sbjct: 183 KEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDI 242

Query: 131 FCLTGKI---NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
            C  GKI   + A +LF SM S GC+H+++SY ILINGYCK  +VEEA++LY EM   G 
Sbjct: 243 LCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGK 302

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P V TY+TL  GL +  +V  A KLF  M+   ++ D+  Y  F+DGLCKNG + EA+E
Sbjct: 303 RPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAME 362

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           LF  L     +LD ++Y+ LIDGLCK+G++EIA E F+ L +  L  +VVT NIMIHG C
Sbjct: 363 LFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFC 422

Query: 308 NDGQMDKAHDLF---LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
              Q+DKA+ LF     MEEN   P++I + TL+ GF   NK  +V+ LLHKM ++
Sbjct: 423 RVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 478



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 134/246 (54%), Gaps = 6/246 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFV---DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           +PN V +N +ID LCKEG +     A+ LFL M  +    + ++Y  LI+G C      E
Sbjct: 230 QPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEE 289

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  L+ EM   G +P+V T++ ++  L + GK+ +A++L  +M    +  ++  Y   +D
Sbjct: 290 AMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLD 349

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C  G +  A ELF  ++S   K D  SY+ LI+G CK  +VE A   ++++  +G++P
Sbjct: 350 GLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQP 409

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQR---DDVAADTSTYNTFIDGLCKNGYIVEAV 246
            VVT N +  G   + QV+ A  LFE+M++   +    D  TYNT + G C++  + E V
Sbjct: 410 NVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVV 469

Query: 247 ELFRTL 252
            L   +
Sbjct: 470 NLLHKM 475



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 169/356 (47%), Gaps = 39/356 (10%)

Query: 27  CKEGFVDKAKALF---LQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQ 83
           CK G +D  +A     L M+   I P + ++N L+ GL   N +++   L+ +M   G+ 
Sbjct: 64  CKTGNIDVIQAFHFFDLMMRSHPI-PPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLS 122

Query: 84  PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEEL 143
           P + T N++ + LC   ++ E    +  +++R   P+  TY+TL+ G             
Sbjct: 123 PDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKG------------- 169

Query: 144 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 203
                              + G CK    +EA  ++ EM ++G+ P V++Y++L  G   
Sbjct: 170 -------------------LYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCC 210

Query: 204 IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI---VEAVELFRTLGILKCELD 260
             ++E + +LF EM    V  +   +N  ID LCK G I     A +LF ++    CE +
Sbjct: 211 AGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHN 270

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
             +Y  LI+G CK  ++E A+ L+  +P+     +V TY+ ++ GL   G++  A+ LF 
Sbjct: 271 EISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFG 330

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            M+ + ++ +  I+V  + G  +     + +EL +++K      D    S ++D L
Sbjct: 331 VMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGL 386



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 115/209 (55%), Gaps = 3/209 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N ++Y  +I+G CK   V++A  L+ +M      P+V TY++L+ GL       +A 
Sbjct: 267 CEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDAN 326

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +LF  M   G+      + + +D LCKNG + EA  L + +   + + +  +YS L+DG 
Sbjct: 327 KLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGL 386

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS---KGIK 188
           C  GK+  A E F  +   G + + V+ NI+I+G+C+ ++V++A  L+ +M      G  
Sbjct: 387 CKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCT 446

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           P ++TYNTL  G  E +++E  + L  +M
Sbjct: 447 PDIITYNTLLRGFCESNKLEEVVNLLHKM 475



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 3/176 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TY+T++ GL + G V  A  LF  MK   I+ D   Y   + GLC      EA  
Sbjct: 303 RPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAME 362

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF E+     +    +++ ++D LCK GK++ A      + Q  ++PN  T + ++ GFC
Sbjct: 363 LFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFC 422

Query: 133 LTGKINRAEELFGSMESM---GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
              ++++A  LF  ME M   GC  D ++YN L+ G+C++ ++EE ++L  +M  +
Sbjct: 423 RVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 478


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 143/364 (39%), Positives = 223/364 (61%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  V YNTIID LC    V+ A  LF +M  + I P+VVTYNSLI  LC+   W++A R
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+++ + P+VVTF+ ++D   K GK+ EA +L D M++R + P+ FTYS+L++GFC
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  +++ A+ +F  M S  C  + V+YN LI G+CK K V+E + L+REM  +G+    V
Sbjct: 373 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  G F+  + ++A  +F++M  D V  D  TY+  +DGLC NG +  A+ +F  L
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL 492

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K E DI  YN +I+G+CK+G++E   +LF SL  + +  +VVTY  M+ G C  G  
Sbjct: 493 QRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 552

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A  LF +M+E    P+   + TLI   +R    +   EL+ +M+  + + DAS + +V
Sbjct: 553 EEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 612

Query: 373 VDLL 376
            ++L
Sbjct: 613 TNML 616



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 118/362 (32%), Positives = 192/362 (53%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  TY+ +I+  C+   +  A A+  +M      PD+VT NSL++G CH N  ++A  L 
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M++ G QP   TFN ++  L ++ +  EA  L+D MV +  +P+  TY  +++G C  
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G I+ A  L   ME    +   V YN +I+  C  K V +AL+L+ EM +KGI+P VVTY
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N+L   L    +   A +L  +M    +  +  T++  ID   K G +VEA +L+  +  
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + DI  Y+ LI+G C   RL+ A  +F  +  +    +VVTYN +I G C   ++D+
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +LF +M +  +  N + + TLIHGF +  +      +  +M    V+PD    S+++D
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474

Query: 375 LL 376
            L
Sbjct: 475 GL 476



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 203/434 (46%), Gaps = 76/434 (17%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT N++++G C    +  A +L  QM      PD  T+N+LIHGL   N  +EA  
Sbjct: 148 EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVA 207

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+ +G QP +VT+ ++++ LCK G +D A  LL  M Q  + P    Y+T++D  C
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYN-------------------------------- 160
               +N A  LF  M++ G + + V+YN                                
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327

Query: 161 ---ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
               LI+ + K  ++ EA  LY EM+ + I P + TY++L  G     +++ A  +FE M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL------------------------- 252
              D   +  TYNT I G CK   + E +ELFR +                         
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447

Query: 253 -------------GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
                        G+L    DI  Y+ L+DGLC +G++E AL +F  L R  +  D+ TY
Sbjct: 448 DNAQIVFKQMVSDGVLP---DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTY 504

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           NIMI G+C  G+++   DLF  +    V PNV+ + T++ GF R     +   L  +MKE
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564

Query: 360 KKVMPDASIVSMVV 373
           +  +PD+   + ++
Sbjct: 565 EGPLPDSGTYNTLI 578



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 158/307 (51%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  LF +M+     PS+V F+ ++  + K  K D    L + M    +  N +TYS L
Sbjct: 63  DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++ FC   +++ A  +   M  +G + D V+ N L+NG+C    + +A+SL  +MV  G 
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P   T+NTL  GLF  ++   A+ L + M       D  TY   ++GLCK G I  A+ 
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L + +   K E  +  YN +ID LC    +  AL LF  +  + +  +VVTYN +I  LC
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           N G+   A  L  DM E  + PNV+ F  LI  FV+  K  +  +L  +M ++ + PD  
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362

Query: 368 IVSMVVD 374
             S +++
Sbjct: 363 TYSSLIN 369



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 171/334 (51%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D A  LF  M      P +V ++ L+  +   N ++    L  +M + G+  ++ T+++
Sbjct: 62  LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C+  ++  A  +L  M++    P+  T ++L++GFC   +I+ A  L G M  MG
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + D  ++N LI+G  ++    EA++L   MV KG +P +VTY  +  GL +   ++ AL
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            L ++M++  +      YNT ID LC    + +A+ LF  +       ++  YN LI  L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C  GR   A  L   +  R +  +VVT++ +I     +G++ +A  L+ +M + ++ P++
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             + +LI+GF   ++  +   +   M  K   P+
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 123/217 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYNT+I G CK   VD+   LF +M    +  + VTY +LIHG   A + + A+
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F +M+  GV P ++T+++++D LC NGK++ A  + + + +  + P+ +TY+ +++G 
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+    +LF S+   G K + V+Y  +++G+C+    EEA +L+REM  +G  P  
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS 571

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
            TYNTL            + +L  EM+      D ST
Sbjct: 572 GTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 144/274 (52%)

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K+D+A  L   MV+    P+   +S L+       K +    L   M+++G  H+  +Y+
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           ILIN +C+  ++  AL++  +M+  G +P +VT N+L  G    +++  A+ L  +M   
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
               D+ T+NT I GL ++    EAV L   + +  C+ D+  Y  +++GLCK G +++A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           L L + + +  +   VV YN +I  LCN   ++ A +LF +M+   + PNV+ + +LI  
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
                + S    LL  M E+K+ P+    S ++D
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  285 bits (730), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 151/389 (38%), Positives = 230/389 (59%), Gaps = 13/389 (3%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M N  G  G+ CKP  ++Y+ IIDGLCK+   D+A+ LF +MK + + PDV++Y SLIHG
Sbjct: 150 MLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHG 209

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
            CH+  W +AK LF EM+D G+QP V T  V++D  CK GK+ EA+ LL++MV R    +
Sbjct: 210 FCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILD 269

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TYSTL+ G C+  +I+ A +LF SM+ +GC+ D ++Y  L+ G C+  ++  AL L++
Sbjct: 270 IVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQ 329

Query: 181 EMVS-------KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           EM++       K I+P V T + L   L +  +V  A +L E M +     D  TY+T I
Sbjct: 330 EMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLI 389

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV-- 291
            GLC    I EA  LF ++  L C  D   Y  L+ GLC++G + IAL+L + +      
Sbjct: 390 KGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGR 449

Query: 292 ----LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
                   +++Y+I+I GLC D + D+A +LF +M+   + P+VI + TLIHGF    K 
Sbjct: 450 YGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKW 509

Query: 348 SKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            K   L ++M +  + PD +  S+++D+L
Sbjct: 510 EKAKCLFNEMLDVGIQPDVTTSSVLIDML 538



 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 152/455 (33%), Positives = 233/455 (51%), Gaps = 82/455 (18%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M N  G  G+ CKP  ++Y+ IIDGLCK+   D+A+ LF +MK + I PDV++Y +LIHG
Sbjct: 443 MLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHG 502

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
            C +  W +AK LF EM+D G+QP V T +V++D LCK GK+ EA++LL++++QR    +
Sbjct: 503 FCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILD 562

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMG----------------------------- 151
             T +TL+ G C+  +I++A +LF  M+ +G                             
Sbjct: 563 VVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHK 622

Query: 152 ------------CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
                       CK + +SY+I+I+G CK    +EA  L++EM + G+ P V++Y +L  
Sbjct: 623 NMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIH 682

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAAD---------------------------------- 225
           G     + + A  LF EM    V  D                                  
Sbjct: 683 GFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP 742

Query: 226 -TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
            T TY T + GLC N  I EA +LF  +  L C  D+  Y  L+ GLC++G ++ ALEL 
Sbjct: 743 NTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELH 802

Query: 285 RSLPRRV------LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           + +             DV++Y+I+I GLC  G+ D+A +LF +M+   V PNVI + +LI
Sbjct: 803 KKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLI 862

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           HGF R  K      L ++M ++ V  +A   S+++
Sbjct: 863 HGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMI 897



 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 115/287 (40%), Positives = 179/287 (62%), Gaps = 6/287 (2%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M +     G+ CKPN ++Y+ IIDGLCK G  D+A+ LF +MK   + PDV++Y SLIHG
Sbjct: 624 MLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHG 683

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
            C +  W +AK LF EM+D GVQP V TF+V++D LCK GK+ EA+ LL++M+QR   PN
Sbjct: 684 FCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPN 743

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY+TL+ G C+  +I+ A +LF  M+ +GC  D V+Y  L+ G C+   ++ AL L++
Sbjct: 744 TVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHK 803

Query: 181 EMVS------KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           +M+S         KP V++Y+ +  GL +  + + A +LF+EM+   V  +  +Y + I 
Sbjct: 804 KMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIH 863

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           G C++G + +A  LF  +     +L+   Y+ +I G CK G+++ AL
Sbjct: 864 GFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910



 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 225/454 (49%), Gaps = 89/454 (19%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  + VTY+T+I GLC +  + +A  LF+ MK     PD + Y +L+ GLC     N A 
Sbjct: 266 CILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIAL 325

Query: 72  RLFFEMMD-------QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
            L  EM++       + ++P V T ++++D LCK GK+ EA+ LL++M+QR    +  TY
Sbjct: 326 HLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTY 385

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDV--------------------------- 157
           STL+ G C+  +I+ A  LF SM+ +GC+ D +                           
Sbjct: 386 STLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLN 445

Query: 158 --------------SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 203
                         SY+I+I+G CK++  +EA  L+ EM ++GI P V++Y TL  G   
Sbjct: 446 DTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCL 505

Query: 204 IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI-- 261
             + E A  LF EM    +  D +T +  ID LCK G ++EA +L   +    C LD+  
Sbjct: 506 SGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVT 565

Query: 262 ------------------------QAYNC---------LIDGLCKSGRLEIALELFRSL- 287
                                   Q   C         L+ GLC+SG ++IALEL +++ 
Sbjct: 566 CTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNML 625

Query: 288 ----PRRV-LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
               P  +    + ++Y+I+I GLC  G+ D+A +LF +M+   V P+VI + +LIHGF 
Sbjct: 626 SDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFC 685

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           R  K      L ++M +  V PD +  S+++D+L
Sbjct: 686 RSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDML 719



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 123/326 (37%), Positives = 179/326 (54%), Gaps = 14/326 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM------KGENINPDVVTYNSLIHGLCHAN 65
           C PN VT  T++ GLC+ G +  A  L   M       G N  P+ ++Y+ +I GLC   
Sbjct: 594 CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCG 653

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             +EA+ LF EM   GV P V+++  ++   C++GK  +A  L + MV   V+P+  T+S
Sbjct: 654 REDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 713

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+D  C  GK+  A EL   M   GC  + V+Y  L+ G C N  + EA  L+ +M   
Sbjct: 714 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKL 773

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD------DVAADTSTYNTFIDGLCKN 239
           G  P VVTY TL  GL +   ++ AL+L ++M  D      +   D  +Y+  IDGLCK+
Sbjct: 774 GCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKH 833

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G   EA ELF+ +  L    ++ +Y  LI G C+SG+LE A  LF  +  + +  + VTY
Sbjct: 834 GREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTY 893

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEEN 325
           ++MIHG C +GQ+DKA  LF  ME N
Sbjct: 894 SVMIHGFCKEGQIDKA--LFQKMEAN 917



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/359 (33%), Positives = 195/359 (54%), Gaps = 14/359 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  + VT  T++ GLC +  + KA  LFL+M+     P+VVT  +L+ GLC + +   A 
Sbjct: 559 CILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIAL 618

Query: 72  RLFFEMMDQ------GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            L   M+          +P+ +++++I+D LCK G+ DEA  L   M    V P+  +Y+
Sbjct: 619 ELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYT 678

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           +L+ GFC +GK   A+ LF  M  +G + D  ++++LI+  CK  +V EA  L   M+ +
Sbjct: 679 SLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQR 738

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G  P  VTY TL  GL    ++  A +LF +MQ+     D  TY T + GLC+ G I  A
Sbjct: 739 GCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTA 798

Query: 246 VELFRTL----GILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           +EL + +    G        D+ +Y+ +IDGLCK GR + A ELF+ +    ++ +V++Y
Sbjct: 799 LELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISY 858

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
             +IHG C  G+++ A  LF +M +  V  N + +  +IHGF +  +  K   L  KM+
Sbjct: 859 TSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKME 915



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/367 (32%), Positives = 190/367 (51%), Gaps = 13/367 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  T + +ID LCKEG V +A  L   M       D+VTY++LI GLC  +  +EA  
Sbjct: 51  RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATW 110

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR------PNAFTYST 126
           LF  M   G +P  +T+  +M  LC+ G ++ A +L   M+    R      P   +YS 
Sbjct: 111 LFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSI 170

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++DG C   + + A ELF  M++ G   D +SY  LI+G+C + + E+A  L+ EM+  G
Sbjct: 171 IIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVG 230

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I+P V T   L     +  +V  A +L E M       D  TY+T I GLC    I EA 
Sbjct: 231 IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEAT 290

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR-------RVLVADVVTY 299
           +LF ++  L C  D  AY  L+ GLC++G++ IAL L + +         + +  DV T 
Sbjct: 291 QLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTS 350

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           +++I  LC +G++ +A++L   M +     +++ + TLI G    ++ S+   L   M++
Sbjct: 351 SMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQK 410

Query: 360 KKVMPDA 366
               PDA
Sbjct: 411 LGCRPDA 417



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 194/357 (54%), Gaps = 22/357 (6%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV---------I 92
           M+   + PD  T+N LI+ LC+    NE       +M +G  P +VT+++         +
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           +D LCK GK+ EA+ LL++M+QR    +  TYSTL+ G C+  +I+ A  LF SM+ +GC
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSK----GI--KPTVVTYNTLFLGLFEIHQ 206
           + D ++Y  L+ G C+   +  AL L++EM++     GI  KPT+++Y+ +  GL +  +
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
            + A +LF+EM+   +  D  +Y + I G C +G   +A  LF  +  +  + D+     
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LID  CK G++  A EL   +  R  + D+VTY+ +I GLC   ++ +A  LF+ M++  
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE-------KKVMPDASIVSMVVDLL 376
             P+ I + TL+ G  +  K +  + L  +M         K + PD +  SM++D+L
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDIL 357


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  284 bits (727), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 141/364 (38%), Positives = 218/364 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ V+Y  +ID LCK G VD A+  F QM  E + PD+V ++SL++GLC  + W + + 
Sbjct: 410 SPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEE 469

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LFFEM++ G+ P++V FN I+  LCK G++ E  RL+D +    VRP+  +Y+TL+DG C
Sbjct: 470 LFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHC 529

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G I+ A +L   M S+G K D  SYN L++GYCK   ++ A S +R+M+S GI P VV
Sbjct: 530 LAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVV 589

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNT+  GLF+  +   A +L+  M       D  TYN  ++GLCK+  + EA+++F+ L
Sbjct: 590 TYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNL 649

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +L+I  +N +I  L K GR E A++LF ++P   LV +VVTY +++  L  +G +
Sbjct: 650 CSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSL 709

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++   LF  ME+N  APN  +   L+   +     S+    L K+ E+    +AS  SM+
Sbjct: 710 EEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSML 769

Query: 373 VDLL 376
           + + 
Sbjct: 770 ISIF 773



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 189/379 (49%), Gaps = 35/379 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY T+IDGLCK    D+A+A+F QM    + P++ TYN LIHG      W E  R+
Sbjct: 236 PDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRM 295

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G +P+  T+  +++ LCKNG+  EA    D M+ + ++P+  TY  ++ G+  
Sbjct: 296 LEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYAT 355

Query: 134 TGK-----------------------------------INRAEELFGSMESMGCKHDDVS 158
            G                                    I++A ++F  M   G   D VS
Sbjct: 356 KGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVS 415

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y  LI+  CK   V++A   + +M+++G+ P +V +++L  GL  + + E   +LF EM 
Sbjct: 416 YGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEML 475

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  +   +NT +  LCK G ++E   L  ++  +    D+ +YN LIDG C +G ++
Sbjct: 476 NVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTID 535

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +L   +    L  D  +YN ++HG C  G++D A+  F  M  N + P V+ + T++
Sbjct: 536 EASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTIL 595

Query: 339 HGFVRINKPSKVIELLHKM 357
           HG  +  + S+  EL   M
Sbjct: 596 HGLFQTKRFSEAKELYLNM 614



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 182/366 (49%), Gaps = 3/366 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENI---NPDVVTYNSLIHGLCHANDWN 68
           C P+TV+YN ++ GLC E   ++A  L   M  + +    P+VV+Y+++I+G       +
Sbjct: 161 CMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVD 220

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +   LF EMMD+G+ P VVT+  ++D LCK    D A  +   M+   V+PN  TY+ L+
Sbjct: 221 KPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLI 280

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G+   GK      +   M + G K +  +Y  L+N  CKN    EA   +  M+ KGIK
Sbjct: 281 HGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIK 340

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P+V TY  +  G      +     L   M  + ++ +   +N F     K G I +A+++
Sbjct: 341 PSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDI 400

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +       D  +Y  LID LCK GR++ A   F  +    +  D+V ++ +++GLC 
Sbjct: 401 FNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCT 460

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
             + +K  +LF +M    + PN++ F T++    +  +  +   L+  ++   V PD   
Sbjct: 461 VDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVIS 520

Query: 369 VSMVVD 374
            + ++D
Sbjct: 521 YNTLID 526



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 199/426 (46%), Gaps = 63/426 (14%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P  VTYNTI+ GL +     +AK L+L M       D+ TYN +++GLC +N  +EA ++
Sbjct: 586  PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKM 645

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGK-------------------------------- 101
            F  +  +G+Q +++TFN+++  L K G+                                
Sbjct: 646  FQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIE 705

Query: 102  ---MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
               ++E   L   M +    PN+   + L+      G I+RA      ++      +  +
Sbjct: 706  EGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEAST 765

Query: 159  YNILINGYC----------------------------KNKEVEEALSLYREMVSKGIKPT 190
             ++LI+ +                             K + +++A SL+REM+ KG+ P 
Sbjct: 766  TSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPD 825

Query: 191  VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            VVTYNT+  GLF+  +   A +L+  M       +  TYN  ++GLCK+  + EA ++F+
Sbjct: 826  VVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQ 885

Query: 251  TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +L     +L+I  +N +I  L K GR E A++LF ++P   LV DVVTY ++   L  +G
Sbjct: 886  SLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEG 945

Query: 311  QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
             +++   LFL ME++    +  +   L+   ++    S+    L K+ EK    +AS  S
Sbjct: 946  SLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTS 1005

Query: 371  MVVDLL 376
             ++ L 
Sbjct: 1006 ELISLF 1011



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 183/391 (46%), Gaps = 39/391 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY+ +I   C+ G ++   A F  +       D +  N L++GLC      EA  +
Sbjct: 92  PNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDV 151

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR---PNAFTYSTLMD 129
             + M + G  P  V++N+++  LC   + +EA  LL +M    V    PN  +YST+++
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GF   G++++   LF  M   G   D V+Y  +I+G CK +  + A +++++M+  G+KP
Sbjct: 212 GFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKP 271

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            + TYN L  G   I + +  +++ EEM       +  TY + ++ LCKNG   EA   F
Sbjct: 272 NIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFF 331

Query: 250 RTL----------------------GILKCELDI-------------QAYNCLIDGLCKS 274
            ++                      G L    D+               +N       K 
Sbjct: 332 DSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKC 391

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G ++ A+++F  + ++ L  D V+Y  +I  LC  G++D A   F  M    V P++++F
Sbjct: 392 GIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVF 451

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +L++G   ++K  KV EL  +M    + P+
Sbjct: 452 SSLVYGLCTVDKWEKVEELFFEMLNVGIHPN 482



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 188/392 (47%), Gaps = 63/392 (16%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G + V  KP++ +YNT++ G CK G +D A + F +M    I P VVTYN+++HGL    
Sbjct: 543 GMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTK 602

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            ++EAK L+  M++ G +  + T+N+I++ LCK+  +DEA ++   +  + ++ N  T++
Sbjct: 603 RFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFN 662

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            ++      G+   A +LF ++ + G   + V+Y +++    +   +EE  SL+  M   
Sbjct: 663 IMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKN 722

Query: 186 GIKPTVVTYNTL----------------------------------FLGLFEIHQVEHAL 211
           G  P     N L                                   + +F   + +H  
Sbjct: 723 GTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHA 782

Query: 212 K----------------LFEEMQRDDVA-------------ADTSTYNTFIDGLCKNGYI 242
           K                L ++ +R D A              D  TYNT + GL + G  
Sbjct: 783 KSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRF 842

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            EA EL+ ++   + +++I  YN +++GLCKS  ++ A ++F+SL  + L  +++T+NIM
Sbjct: 843 SEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIM 902

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           I  L   G+ + A DLF  +  N + P+V+ +
Sbjct: 903 IGALLKGGRKEDAMDLFAAIPANGLVPDVVTY 934



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 149/334 (44%), Gaps = 39/334 (11%)

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
           V P+  T+++++   C+ G ++       L+++   R +    + L++G C   ++  A 
Sbjct: 90  VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149

Query: 142 E-LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI---KPTVVTYNTL 197
           + L   M  +GC  D VSYNIL+ G C  K  EEAL L   M    +    P VV+Y+T+
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G F   QV+    LF EM    +  D  TY T IDGLCK      A  +F+ +     
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269

Query: 258 ELDIQAYNCLIDG-----------------------------------LCKSGRLEIALE 282
           + +I  YNCLI G                                   LCK+GR   A  
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARF 329

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
            F S+  + +   V TY IM+HG    G + + HDL   M  N ++PN  IF      + 
Sbjct: 330 FFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYA 389

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +     K +++ +KM+++ + PDA     ++D L
Sbjct: 390 KCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDAL 423



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 1/206 (0%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P+ VTYNTI+ GL + G   +AK L+L M       ++ TYN +++GLC +N  +EA ++
Sbjct: 824  PDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKM 883

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            F  +  +G+Q +++TFN+++  L K G+ ++A  L   +    + P+  TY  + +    
Sbjct: 884  FQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIE 943

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             G +   + LF +ME  G   D    N L+    +  ++  A +   ++  K       T
Sbjct: 944  EGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEAST 1003

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQR 219
             + L + LF   + +H  K   E  R
Sbjct: 1004 TSEL-ISLFSRGEYQHHAKSLPEKYR 1028



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 106/217 (48%)

Query: 32   VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
            +D A +LF +M  + + PDVVTYN+++HGL     ++EAK L+  M++   Q ++ T+N+
Sbjct: 807  IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNI 866

Query: 92   IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
            I++ LCK+  +DEA ++   +  + ++ N  T++ ++      G+   A +LF ++ + G
Sbjct: 867  ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 926

Query: 152  CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
               D V+Y ++     +   +EE   L+  M   G        N L   L +   +  A 
Sbjct: 927  LVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAG 986

Query: 212  KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
                ++   + + + ST +  I    +  Y   A  L
Sbjct: 987  AYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSL 1023


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  284 bits (727), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 139/364 (38%), Positives = 218/364 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PN V Y  +ID LCK G VD A+  F QM  E + P++V +NSL++GLC  + W  A+ 
Sbjct: 406 SPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEE 465

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L +EM+DQG+ P+ V FN ++  LC  G++ E  RL+DLM    VRP+AF+Y+ L+ G+C
Sbjct: 466 LVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYC 525

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           LTG+ + AE++F  M S+G    +V+YN L++GYC    +++A  L+REM+ KG+ P VV
Sbjct: 526 LTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVV 585

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNT+  GLF+  +   A +L+  M       D  TYN  ++GLCK+  + EA ++F++L
Sbjct: 586 TYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSL 645

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +L+I  +  +I  L K GR E A++LF ++P   LV +VVTY ++   L  +G +
Sbjct: 646 CSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSL 705

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++   LF  ME+N  APN  +   L+   +     S+    L K+ E+    +AS  S++
Sbjct: 706 EEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLL 765

Query: 373 VDLL 376
           + + 
Sbjct: 766 MSIF 769



 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 192/364 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+   +N       K G +DKA  +F +M+   ++P+VV Y +LI  LC     ++A+ 
Sbjct: 371 SPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEV 430

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F +M+++GV P++V FN ++  LC   K + A  L+  M+ + + PNA  ++TL+   C
Sbjct: 431 KFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLC 490

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++     L   ME +G + D  SY  LI+GYC     +EA  ++  MVS G+ PT V
Sbjct: 491 NVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEV 550

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G     +++ A  LF EM R  V     TYNT + GL +     EA EL+  +
Sbjct: 551 TYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM 610

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + DI  YN +++GLCKS  ++ A ++F+SL  + L  +++T+ IMI  L   G+ 
Sbjct: 611 INSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRK 670

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A DLF  +  N + PNV+ +  +    +      +   L   M++    P++ +++ +
Sbjct: 671 EDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNAL 730

Query: 373 VDLL 376
           V  L
Sbjct: 731 VRRL 734



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 184/379 (48%), Gaps = 35/379 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY T+IDGLCK    D+A+ +F QM      P+  TYN LIHG      W E  ++
Sbjct: 232 PDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQM 291

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G++P   T+  +++ LCKNG+  EA    D M+++ ++P   TY  L+ G+  
Sbjct: 292 LEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYAT 351

Query: 134 TGK-----------------------------------INRAEELFGSMESMGCKHDDVS 158
            G                                    I++A ++F  M   G   + V+
Sbjct: 352 KGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVN 411

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y  LI+  CK   V++A   + +M+++G+ P +V +N+L  GL  + + E A +L  EM 
Sbjct: 412 YGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEML 471

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  +   +NT I  LC  G ++E   L   +  +    D  +Y  LI G C +GR +
Sbjct: 472 DQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTD 531

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A ++F  +    L    VTYN ++HG C+  ++D A+ LF +M    V P V+ + T++
Sbjct: 532 EAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTIL 591

Query: 339 HGFVRINKPSKVIELLHKM 357
           HG  +  + S+  EL   M
Sbjct: 592 HGLFQTKRFSEAKELYLNM 610



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 176/358 (49%), Gaps = 3/358 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMK---GENINPDVVTYNSLIHGLCHANDWN 68
           C P+TV+Y  ++ GLC E   ++A  L   M    G    P+VV+Y+ +I+G       +
Sbjct: 157 CMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVD 216

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +   LF EM+D+G+ P VVT+  ++D LCK    D A  +   M+    +PN +TY+ L+
Sbjct: 217 KPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLI 276

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G+   GK     ++   M + G K D  +Y  L+N  CKN    EA   +  M+ KGIK
Sbjct: 277 HGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIK 336

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P V TY  L  G      +       + M  + ++ D   +N F     K G I +A+++
Sbjct: 337 PKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDI 396

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +       ++  Y  LID LCK GR++ A   F  +    +  ++V +N +++GLC 
Sbjct: 397 FNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCT 456

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             + ++A +L  +M +  + PN + F TLI     + +  +   L+  M+   V PDA
Sbjct: 457 VDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDA 514



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 184/399 (46%), Gaps = 39/399 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY+ +I   C+ G ++   A F  +       D +  N L+ GLCH     EA  +
Sbjct: 88  PNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDV 147

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ---RDVRPNAFTYSTLMD 129
             + M + G  P  V++ +++  LC   + +EA  LL +M     R   PN  +YS +++
Sbjct: 148 LLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVIN 207

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GF   G++++   LF  M   G   D V+Y  +I+G CK +  + A  ++++M+  G KP
Sbjct: 208 GFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKP 267

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
              TYN L  G   I + +  +++ EEM    +  D  TY + ++ LCKNG   EA   F
Sbjct: 268 NNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFF 327

Query: 250 ------------RTLGIL-----------------------KCELDIQAYNCLIDGLCKS 274
                        T GIL                           D   +N       K 
Sbjct: 328 DSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKC 387

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G ++ A+++F  + +  L  +VV Y  +I  LC  G++D A   F  M    V PN+++F
Sbjct: 388 GMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVF 447

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            +L++G   ++K  +  EL+++M ++ + P+A   + ++
Sbjct: 448 NSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLI 486



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 177/400 (44%), Gaps = 41/400 (10%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY ++++ LCK G   +A+  F  M  + I P V TY  LIHG       +E   
Sbjct: 301 KPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHS 360

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
               M++ G+ P    FN+      K G +D+A  + + M Q  + PN   Y  L+D  C
Sbjct: 361 FLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALC 420

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ AE  F  M + G   + V +N L+ G C   + E A  L  EM+ +GI P  V
Sbjct: 421 KLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAV 480

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR-- 250
            +NTL   L  + +V    +L + M+   V  D  +Y   I G C  G   EA ++F   
Sbjct: 481 FFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGM 540

Query: 251 -TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA--------------- 294
            ++G+   E+    YN L+ G C + R++ A  LFR + R+ +                 
Sbjct: 541 VSIGLSPTEV---TYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQT 597

Query: 295 --------------------DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
                               D+ TYNI+++GLC    +D+A  +F  +    +  N+I F
Sbjct: 598 KRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITF 657

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +I   ++  +    ++L   +    ++P+     +V +
Sbjct: 658 TIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAE 697



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 160/339 (47%), Gaps = 10/339 (2%)

Query: 45  ENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDE 104
           + + P++ TY+ LI   C           F  ++  G +   +  N ++  LC   ++ E
Sbjct: 84  DKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGE 143

Query: 105 ASRLLDLMVQR----DVRPNAFTYSTLMDGFCLTGKINRAEELFGSM---ESMGCKHDDV 157
           A   +D+++QR       P+  +Y+ L+ G C   +   A EL   M       C  + V
Sbjct: 144 A---MDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVV 200

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           SY+I+ING+    +V++  +L+ EM+ +GI P VVTY T+  GL +    + A  +F++M
Sbjct: 201 SYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQM 260

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
             +    +  TYN  I G    G   E V++   +     + D   Y  L++ LCK+GR 
Sbjct: 261 IDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRC 320

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A   F S+ R+ +   V TY I+IHG    G + + H     M EN ++P+  IF   
Sbjct: 321 REARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIF 380

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              + +     K +++ +KM++  + P+      ++D L
Sbjct: 381 FSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDAL 419



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 119/244 (48%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           +G + +   P  VTYNT++ G C    +D A  LF +M  + + P VVTYN+++HGL   
Sbjct: 538 DGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQT 597

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
             ++EAK L+  M++ G +  + T+N+I++ LCK+  +DEA ++   +  + ++ N  T+
Sbjct: 598 KRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITF 657

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + ++      G+   A +LF ++ + G   + V+Y ++     +   +EE  SL+  M  
Sbjct: 658 TIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEK 717

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
            G  P     N L   L     +  A     ++   + + + ST +  +     + Y   
Sbjct: 718 NGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHH 777

Query: 245 AVEL 248
           A  L
Sbjct: 778 AKSL 781



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 42/246 (17%)

Query: 173 EEALSLYREMV---SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
           E A+S +  MV   S  + P + TY+ L      +  +EH    F  + +     D    
Sbjct: 69  ELAVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAI 128

Query: 230 NTFIDGLCKNGYIVEAVE-LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           N  + GLC    + EA++ L + +  L C  D  +Y  L+ GLC   R E ALEL   + 
Sbjct: 129 NQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMA 188

Query: 289 R---RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT--------- 336
               R    +VV+Y+I+I+G   +GQ+DK ++LFL+M +  + P+V+ + T         
Sbjct: 189 DDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQ 248

Query: 337 --------------------------LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
                                     LIHG++ I K  +V+++L +M  + + PD     
Sbjct: 249 LFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYG 308

Query: 371 MVVDLL 376
            +++ L
Sbjct: 309 SLLNYL 314


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  284 bits (726), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 139/364 (38%), Positives = 225/364 (61%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPNT  Y+ +ID  CK+G +D A +L  +MK ++I PD+ TY++LI  LC  + W   + 
Sbjct: 210 KPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRT 269

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM+   + P+V TFN ++D LCK GK+++A  ++  M+++ V P+  TY+ ++DG+ 
Sbjct: 270 LFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYG 329

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G+++RA E+F SM +   + + +SYNILINGY + K+++EA+ + RE+  KG+KP++V
Sbjct: 330 LRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIV 389

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T N L  GLFE+ + + A   F+EM       D  T+ T + G  KNG + EA+  F  L
Sbjct: 390 TCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKL 449

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + + +IQ Y  +IDGLCK+G+L+ A   F  LP   L  DV+TY  MI G C +G +
Sbjct: 450 ERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLL 509

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A D+   ME+N    +   +  ++ GF+R NK S++   L ++  K    +A+ V ++
Sbjct: 510 DEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELL 569

Query: 373 VDLL 376
           +D++
Sbjct: 570 MDII 573



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 169/326 (51%), Gaps = 1/326 (0%)

Query: 52  VTYNSLIHGLCHANDWNEAKRLFFEMMDQGV-QPSVVTFNVIMDELCKNGKMDEASRLLD 110
           V +N+L+ GL   N   +A  LF +++ + + +P+ V +  +M+ LCK G   +A  LL 
Sbjct: 143 VIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLR 202

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
           LM Q   +PN   YS ++D FC  G ++ A  L   M+      D  +Y+ LI+  CK  
Sbjct: 203 LMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLS 262

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
           + E   +L+ EM+   I P V T+N++  GL +  +VE A ++   M    V  D  TYN
Sbjct: 263 QWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYN 322

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
             IDG    G +  A E+F ++     E +I +YN LI+G  +  +++ A+++ R + ++
Sbjct: 323 MIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQK 382

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
            L   +VT N+++HGL   G+   A + F +M      P++    TL+ G+ +     + 
Sbjct: 383 GLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEA 442

Query: 351 IELLHKMKEKKVMPDASIVSMVVDLL 376
           +   HK++ ++   +  I + V+D L
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVIDGL 468



 Score =  157 bits (396), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 176/370 (47%), Gaps = 36/370 (9%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM-------------- 77
           +D A +LF QM      P VV+++ L+  L H   ++    LF E+              
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 78  ---------------------MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
                                  +G+  + V FN ++  L    K+ +A  L   +V+ +
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 117 V-RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
           +  PN   Y T+M+G C  G   +A +L   ME    K +   Y+I+I+ +CK+  ++ A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
            SL  EM  K I P + TY+TL   L ++ Q E+   LF EM   ++  +  T+N+ IDG
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           LCK G + +A E+ R +     + D+  YN +IDG    G+++ A E+F S+  + +  +
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPN 352

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           +++YNI+I+G     ++D+A  +  ++ +  + P+++    L+HG   + +         
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD 412

Query: 356 KMKEKKVMPD 365
           +M     +PD
Sbjct: 413 EMLSAGHIPD 422



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 131/274 (47%), Gaps = 1/274 (0%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D+A  L   MV+    P+  ++S L+         +    LF  +  +     +   +I
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           ++N  C     +   S+      KGI    V +NTL  GLF  ++V+ A+ LF+++ R++
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 222 VAADTST-YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
           +       Y T ++GLCK G+  +A +L R +     + +   Y+ +ID  CK G L+ A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
             L   + ++ +  D+ TY+ +I  LC   Q +    LFL+M    + PNV  F ++I G
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +  K     E++  M EK V PD    +M++D
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIID 326



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 126/271 (46%), Gaps = 35/271 (12%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TYN IIDG    G VD+A+ +F  M  ++I P++++YN LI+G       +EA ++
Sbjct: 316 PDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQV 375

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM----- 128
             E+  +G++PS+VT NV++  L + G+   A    D M+     P+ +T+ TL+     
Sbjct: 376 CREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFK 435

Query: 129 ------------------------------DGFCLTGKINRAEELFGSMESMGCKHDDVS 158
                                         DG C  GK+++A   F  +  +G   D ++
Sbjct: 436 NGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVIT 495

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y  +I+GYC+   ++EA  + R+M   G      TYN +  G    ++V       EE+ 
Sbjct: 496 YTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIA 555

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
               + + +T    +D + ++  ++  +  F
Sbjct: 556 GKSFSFEAATVELLMDIIAEDPSLLNMIPEF 586



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 11/213 (5%)

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
           K +++A SL+R+MV     P+VV+++ L   L  +      + LF E+ +  +       
Sbjct: 51  KCLDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFIL 110

Query: 230 NTFIDGLC-----KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           +  ++  C       G+ V A+   + +       +   +N L+ GL    +++ A+ LF
Sbjct: 111 SIVVNSCCLMHRTDLGFSVLAIHFKKGI-----PFNQVIFNTLLRGLFAENKVKDAVHLF 165

Query: 285 RSLPRR-VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           + L R  +   + V Y  +++GLC  G   KA DL   ME+ +  PN  I+  +I  F +
Sbjct: 166 KKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCK 225

Query: 344 INKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                    LL++MK+K + PD    S ++D L
Sbjct: 226 DGMLDGATSLLNEMKQKSIPPDIFTYSTLIDAL 258


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  283 bits (725), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 138/364 (37%), Positives = 217/364 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PN V Y  +ID LCK G VD A+  F QM  E + P++V +NSL++GLC  + W  A+ 
Sbjct: 341 SPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEE 400

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L +EM+DQG+ P+ V FN ++  LC  G++ E  RL+DLM    VRP+AF+Y+ L+ G+C
Sbjct: 401 LVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYC 460

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G+ + AE++F  M S+G    +V+YN L++GYC    +++A  L+REM+ KG+ P VV
Sbjct: 461 LAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVV 520

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNT+  GLF+  +   A +L+  M       D  TYN  ++GLCK+  + EA ++F++L
Sbjct: 521 TYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSL 580

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +L+I  +  +I  L K GR E A++LF ++P   LV +VVTY ++   L  +G +
Sbjct: 581 CSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSL 640

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++   LF  ME+N  APN  +   L+   +     S+    L K+ E+    +AS  S++
Sbjct: 641 EEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLL 700

Query: 373 VDLL 376
           + + 
Sbjct: 701 ISIF 704



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 185/357 (51%), Gaps = 6/357 (1%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           MAN +G     C PN VTY T+IDGLCK    D+A+ +F QM    + P+  TYN LIHG
Sbjct: 195 MANDHGR---SCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHG 251

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
                 W E  ++  +M  +G++P   T+  +++ LC    + E    LDLMV+  + P+
Sbjct: 252 YLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCA---LSEMHSFLDLMVENGLSPD 308

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
              ++     +   G I++A ++F  M   G   + V+Y  LI+  CK   V++A   + 
Sbjct: 309 HHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFN 368

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           +M+++G+ P +V +N+L  GL  + + E A +L  EM    +  +   +NT I  LC  G
Sbjct: 369 QMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVG 428

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            ++E   L   +  +    D  +Y  LI G C +GR + A ++F  +    L    VTYN
Sbjct: 429 RVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYN 488

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            ++HG C+  ++D A+ LF +M    V P V+ + T++HG  +  + S+  EL   M
Sbjct: 489 TLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM 545



 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 192/364 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+   +N       K G +DKA  +F +M+   ++P+VV Y +LI  LC     ++A+ 
Sbjct: 306 SPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEV 365

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F +M+++GV P++V FN ++  LC   K + A  L+  M+ + + PNA  ++TL+   C
Sbjct: 366 KFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLC 425

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++     L   ME +G + D  SY  LI+GYC     +EA  ++  MVS G+ PT V
Sbjct: 426 NVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEV 485

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G     +++ A  LF EM R  V     TYNT + GL +     EA EL+  +
Sbjct: 486 TYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM 545

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + DI  YN +++GLCKS  ++ A ++F+SL  + L  +++T+ IMI  L   G+ 
Sbjct: 546 INSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRK 605

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A DLF  +  N + PNV+ +  +    +      +   L   M++    P++ +++ +
Sbjct: 606 EDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNAL 665

Query: 373 VDLL 376
           V  L
Sbjct: 666 VRRL 669



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 182/366 (49%), Gaps = 11/366 (3%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALF--LQMKGENINPDVVTYNSLIHGLCHA 64
           E  +   PNT TY+ +I  LC+ G +  + A F  +   G  +N  V+  N L+ GLC  
Sbjct: 89  ECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVI--NQLLKGLCDG 146

Query: 65  NDWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ---RDVRPN 120
               EA  +  + M + G  P  V++++++   C   + +EA  LL +M     R   PN
Sbjct: 147 KRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPN 206

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY+T++DG C     +RAE +F  M   G K ++ +YN LI+GY    + +E + +  
Sbjct: 207 VVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLE 266

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           +M ++G+KP   TY +L   L  + ++   L L   M  + ++ D   +N F     K G
Sbjct: 267 KMSARGLKPDCYTYGSLLNYLCALSEMHSFLDL---MVENGLSPDHHIFNIFFSAYAKCG 323

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            I +A+++F  +       ++  Y  LID LCK GR++ A   F  +    +  ++V +N
Sbjct: 324 MIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFN 383

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +++GLC   + ++A +L  +M +  + PN + F TLI     + +  +   L+  M+  
Sbjct: 384 SLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV 443

Query: 361 KVMPDA 366
            V PDA
Sbjct: 444 GVRPDA 449



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 161/391 (41%), Gaps = 85/391 (21%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDE-------------------------------- 95
           ++A +LF E++      SVV FN I++                                 
Sbjct: 31  DDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESELVVSLFNRMVREC 90

Query: 96  -----------------LCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
                            LC+ G++  +     L+++   R N    + L+ G C   ++ 
Sbjct: 91  SIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVG 150

Query: 139 RAEE-LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS---KGIKPTVVTY 194
            A + L   M  +GC  D VSY+IL+ G+C     EEAL L R M +   +   P VVTY
Sbjct: 151 EAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTY 210

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            T+  GL +    + A  +F++M  + V  +  TYN  I G    G   E V++   +  
Sbjct: 211 TTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSA 270

Query: 255 LKCELDIQAYNCLIDGLC--------------------------------KSGRLEIALE 282
              + D   Y  L++ LC                                K G ++ A++
Sbjct: 271 RGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMD 330

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           +F  + +  L  +VV Y  +I  LC  G++D A   F  M    V PN+++F +L++G  
Sbjct: 331 IFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLC 390

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            ++K  +  EL+++M ++ + P+A   + ++
Sbjct: 391 TVDKWERAEELVYEMLDQGICPNAVFFNTLI 421



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 119/244 (48%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           +G + +   P  VTYNT++ G C    +D A  LF +M  + + P VVTYN+++HGL   
Sbjct: 473 DGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQT 532

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
             ++EAK L+  M++ G +  + T+N+I++ LCK+  +DEA ++   +  + ++ N  T+
Sbjct: 533 KRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITF 592

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + ++      G+   A +LF ++ + G   + V+Y ++     +   +EE  SL+  M  
Sbjct: 593 TIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEK 652

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
            G  P     N L   L     +  A     ++   + + + ST +  I     + Y   
Sbjct: 653 NGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIFTSDEYQHH 712

Query: 245 AVEL 248
           A  L
Sbjct: 713 AKSL 716



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 7/208 (3%)

Query: 176 LSLYREMV---SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           +SL+  MV   S  + P   TY+ L   L  + +++H+   F  + +     +    N  
Sbjct: 80  VSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQL 139

Query: 233 IDGLCKNGYIVEAVE-LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR-- 289
           + GLC    + EA++ L + +  L C  D  +Y+ L+ G C   R E ALEL R +    
Sbjct: 140 LKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDH 199

Query: 290 -RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
            R    +VVTY  +I GLC     D+A  +F  M +N V PN   +  LIHG++ I K  
Sbjct: 200 GRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWK 259

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +V+++L KM  + + PD      +++ L
Sbjct: 260 EVVQMLEKMSARGLKPDCYTYGSLLNYL 287


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  283 bits (725), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 142/364 (39%), Positives = 229/364 (62%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + + V +NTIID LCK   VD A  LF +M+ + I P+VVTY+SLI  LC    W++A +
Sbjct: 219 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 278

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+++ + P++VTFN ++D   K GK  EA +L D M++R + P+ FTY++L++GFC
Sbjct: 279 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 338

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  ++++A+++F  M S  C  D V+YN LI G+CK+K VE+   L+REM  +G+    V
Sbjct: 339 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 398

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  GLF     ++A K+F++M  D V  D  TY+  +DGLC NG + +A+E+F  +
Sbjct: 399 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 458

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + +LDI  Y  +I+G+CK+G+++   +LF SL  + +  +VVTYN MI GLC+   +
Sbjct: 459 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 518

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A+ L   M+E+   PN   + TLI   +R    +   EL+ +M+  + + DAS + +V
Sbjct: 519 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 578

Query: 373 VDLL 376
            ++L
Sbjct: 579 ANML 582



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 200/392 (51%), Gaps = 35/392 (8%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TYN +I+  C+   +  A AL  +M      P +VT +SL++G CH    ++A  L  +M
Sbjct: 84  TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           ++ G +P  +TF  ++  L  + K  EA  L+D MVQR  +PN  TY  +++G C  G  
Sbjct: 144 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 203

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  L   ME+   + D V +N +I+  CK + V++AL+L++EM +KGI+P VVTY++L
Sbjct: 204 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 263

Query: 198 -------------------------------FLGLFEIHQVE----HALKLFEEMQRDDV 222
                                          F  L +    E     A KL+++M +  +
Sbjct: 264 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 323

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
             D  TYN+ ++G C +  + +A ++F  +    C  D+  YN LI G CKS R+E   E
Sbjct: 324 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 383

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           LFR +  R LV D VTY  +I GL +DG  D A  +F  M  + V P+++ +  L+ G  
Sbjct: 384 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 443

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
              K  K +E+   M++ ++  D  I + +++
Sbjct: 444 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 475



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 195/396 (49%), Gaps = 35/396 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+T+T+ T+I GL       +A AL  +M      P++VTY  +++GLC   D + A  
Sbjct: 149 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 208

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M    ++  VV FN I+D LCK   +D+A  L   M  + +RPN  TYS+L+   C
Sbjct: 209 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 268

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+ + A +L   M       + V++N LI+ + K  +  EA  LY +M+ + I P + 
Sbjct: 269 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 328

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  G     +++ A ++FE M   D   D  TYNT I G CK+  + +  ELFR +
Sbjct: 329 TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 388

Query: 253 -----------------GILK---CE---------------LDIQAYNCLIDGLCKSGRL 277
                            G+     C+                DI  Y+ L+DGLC +G+L
Sbjct: 389 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 448

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           E ALE+F  + +  +  D+  Y  MI G+C  G++D   DLF  +    V PNV+ + T+
Sbjct: 449 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 508

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           I G        +   LL KMKE   +P++   + ++
Sbjct: 509 ISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 544



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 161/312 (51%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           Y  ++    H    ++A  LF  M+     PS+V FN ++  + K  K D    L + M 
Sbjct: 15  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 74

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
           + ++    +TY+ L++ FC   +I+ A  L G M  +G +   V+ + L+NGYC  K + 
Sbjct: 75  RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 134

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           +A++L  +MV  G +P  +T+ TL  GLF  ++   A+ L + M +     +  TY   +
Sbjct: 135 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 194

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
           +GLCK G    A+ L   +   K E D+  +N +ID LCK   ++ AL LF+ +  + + 
Sbjct: 195 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 254

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            +VVTY+ +I  LC+ G+   A  L  DM E  + PN++ F  LI  FV+  K  +  +L
Sbjct: 255 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 314

Query: 354 LHKMKEKKVMPD 365
              M ++ + PD
Sbjct: 315 YDDMIKRSIDPD 326



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 125/217 (57%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYNT+I G CK   V+    LF +M    +  D VTY +LI GL H  D + A+
Sbjct: 358 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 417

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++F +M+  GV P ++T+++++D LC NGK+++A  + D M + +++ + + Y+T+++G 
Sbjct: 418 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 477

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK++   +LF S+   G K + V+YN +I+G C  + ++EA +L ++M   G  P  
Sbjct: 478 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNS 537

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
            TYNTL            + +L  EM+      D ST
Sbjct: 538 GTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 574



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 169/334 (50%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D A  LF  M      P +V +N L+  +     ++    L  +M    +   + T+N+
Sbjct: 28  LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 87

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C+  ++  A  LL  M++    P+  T S+L++G+C   +I+ A  L   M  MG
Sbjct: 88  LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + D +++  LI+G   + +  EA++L   MV +G +P +VTY  +  GL +    + AL
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            L  +M+   + AD   +NT ID LCK  ++ +A+ LF+ +       ++  Y+ LI  L
Sbjct: 208 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 267

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C  GR   A +L   +  + +  ++VT+N +I     +G+  +A  L+ DM + ++ P++
Sbjct: 268 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 327

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             + +L++GF   ++  K  ++   M  K   PD
Sbjct: 328 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 361



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 123/286 (43%), Gaps = 39/286 (13%)

Query: 95  ELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
           E+ +NG    K+D+A  L   MV+    P+   ++ L+       K +    L   M+ +
Sbjct: 17  EILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 76

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
              H   +YNILIN +C+  ++  AL+L  +M+  G +P++VT ++L  G     ++  A
Sbjct: 77  EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 136

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           + L ++M       DT T+ T I GL  +    EAV L   +    C+            
Sbjct: 137 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ------------ 184

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
                                   ++VTY ++++GLC  G  D A +L   ME   +  +
Sbjct: 185 -----------------------PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 221

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           V+IF T+I    +       + L  +M+ K + P+    S ++  L
Sbjct: 222 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 267


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  283 bits (725), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 142/364 (39%), Positives = 229/364 (62%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + + V +NTIID LCK   VD A  LF +M+ + I P+VVTY+SLI  LC    W++A +
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+++ + P++VTFN ++D   K GK  EA +L D M++R + P+ FTY++L++GFC
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  ++++A+++F  M S  C  D V+YN LI G+CK+K VE+   L+REM  +G+    V
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  GLF     ++A K+F++M  D V  D  TY+  +DGLC NG + +A+E+F  +
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + +LDI  Y  +I+G+CK+G+++   +LF SL  + +  +VVTYN MI GLC+   +
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A+ L   M+E+   PN   + TLI   +R    +   EL+ +M+  + + DAS + +V
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616

Query: 373 VDLL 376
            ++L
Sbjct: 617 ANML 620



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 200/392 (51%), Gaps = 35/392 (8%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TYN +I+  C+   +  A AL  +M      P +VT +SL++G CH    ++A  L  +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           ++ G +P  +TF  ++  L  + K  EA  L+D MVQR  +PN  TY  +++G C  G  
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  L   ME+   + D V +N +I+  CK + V++AL+L++EM +KGI+P VVTY++L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301

Query: 198 -------------------------------FLGLFEIHQVE----HALKLFEEMQRDDV 222
                                          F  L +    E     A KL+++M +  +
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
             D  TYN+ ++G C +  + +A ++F  +    C  D+  YN LI G CKS R+E   E
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           LFR +  R LV D VTY  +I GL +DG  D A  +F  M  + V P+++ +  L+ G  
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
              K  K +E+   M++ ++  D  I + +++
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 196/396 (49%), Gaps = 35/396 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+T+T+ T+I GL       +A AL  +M      P++VTY  +++GLC   D + A  
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M    ++  VV FN I+D LCK   +D+A  L   M  + +RPN  TYS+L+   C
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+ + A +L   M       + V++N LI+ + K  +  EA  LY +M+ + I P + 
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 366

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  G     +++ A ++FE M   D   D  TYNT I G CK+  + +  ELFR +
Sbjct: 367 TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426

Query: 253 ---GIL-----------------KCE---------------LDIQAYNCLIDGLCKSGRL 277
              G++                  C+                DI  Y+ L+DGLC +G+L
Sbjct: 427 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 486

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           E ALE+F  + +  +  D+  Y  MI G+C  G++D   DLF  +    V PNV+ + T+
Sbjct: 487 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 546

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           I G        +   LL KMKE   +P++   + ++
Sbjct: 547 ISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 161/312 (51%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           Y  ++    H    ++A  LF  M+     PS+V FN ++  + K  K D    L + M 
Sbjct: 53  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
           + ++    +TY+ L++ FC   +I+ A  L G M  +G +   V+ + L+NGYC  K + 
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           +A++L  +MV  G +P  +T+ TL  GLF  ++   A+ L + M +     +  TY   +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
           +GLCK G    A+ L   +   K E D+  +N +ID LCK   ++ AL LF+ +  + + 
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            +VVTY+ +I  LC+ G+   A  L  DM E  + PN++ F  LI  FV+  K  +  +L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352

Query: 354 LHKMKEKKVMPD 365
              M ++ + PD
Sbjct: 353 YDDMIKRSIDPD 364



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 125/217 (57%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYNT+I G CK   V+    LF +M    +  D VTY +LI GL H  D + A+
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++F +M+  GV P ++T+++++D LC NGK+++A  + D M + +++ + + Y+T+++G 
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK++   +LF S+   G K + V+YN +I+G C  + ++EA +L ++M   G  P  
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNS 575

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
            TYNTL            + +L  EM+      D ST
Sbjct: 576 GTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 612



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 169/334 (50%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D A  LF  M      P +V +N L+  +     ++    L  +M    +   + T+N+
Sbjct: 66  LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C+  ++  A  LL  M++    P+  T S+L++G+C   +I+ A  L   M  MG
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + D +++  LI+G   + +  EA++L   MV +G +P +VTY  +  GL +    + AL
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            L  +M+   + AD   +NT ID LCK  ++ +A+ LF+ +       ++  Y+ LI  L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C  GR   A +L   +  + +  ++VT+N +I     +G+  +A  L+ DM + ++ P++
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             + +L++GF   ++  K  ++   M  K   PD
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 123/286 (43%), Gaps = 39/286 (13%)

Query: 95  ELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
           E+ +NG    K+D+A  L   MV+    P+   ++ L+       K +    L   M+ +
Sbjct: 55  EILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
              H   +YNILIN +C+  ++  AL+L  +M+  G +P++VT ++L  G     ++  A
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           + L ++M       DT T+ T I GL  +    EAV L   +    C+            
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ------------ 222

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
                                   ++VTY ++++GLC  G  D A +L   ME   +  +
Sbjct: 223 -----------------------PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 259

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           V+IF T+I    +       + L  +M+ K + P+    S ++  L
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  283 bits (723), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 144/365 (39%), Positives = 222/365 (60%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ V Y +IID LCK+  V +A  LF +M  + I+P + TYNSLIH LC+  +W    
Sbjct: 204 CQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVT 263

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM++  + P+VV F+ ++D LCK GK+ EA  ++D+M++R V PN  TY+ LMDG 
Sbjct: 264 ALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGH 323

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL  +++ A ++F +M   G   D VSY+ LINGYCK + +E+A+ L+ EM  K + P  
Sbjct: 324 CLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNT 383

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+TL  GL  + +++ A+ LF EM       D  +Y   +D LCKN  + EA+ L + 
Sbjct: 384 VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 443

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DIQ Y  +IDG+C++G LE A +LF +L  + L  +V TY IMI+GLC  G 
Sbjct: 444 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGL 503

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + +A  LF +M+    +PN   +  +  GF+R N+  + I+LL +M  +    D S  ++
Sbjct: 504 LAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTV 563

Query: 372 VVDLL 376
           +V++L
Sbjct: 564 LVEML 568



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 190/363 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   +  ++  + K        +L  QM    I P++ T N LI+  CH      A  +
Sbjct: 66  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 125

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G QP++ TFN ++  LC  GK+ E   L D M+    +PN  TY TL++G C 
Sbjct: 126 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 185

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A  L  SME   C+ D V Y  +I+  CK+++V +A +L+ EM+ +GI P++ T
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 245

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L   L  + + +H   L  EM    +  +   ++T +D LCK G ++EA ++   + 
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 305

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E ++  YN L+DG C    ++ A+++F ++  +    DVV+Y+ +I+G C   +++
Sbjct: 306 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 365

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA  LF +M    + PN + + TL+HG   + +    I L H+M  +  +PD     +++
Sbjct: 366 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 425

Query: 374 DLL 376
           D L
Sbjct: 426 DYL 428



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 82/234 (35%), Positives = 135/234 (57%), Gaps = 3/234 (1%)

Query: 10  VVCK---PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           +VCK   P+ V+Y+T+I+G CK   ++KA  LF +M  + + P+ VTY++L+HGLCH   
Sbjct: 339 MVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGR 398

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A  LF EM+ +G  P  V++ +++D LCKN ++DEA  LL  +   ++ P+   Y+ 
Sbjct: 399 LQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTI 458

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++DG C  G++  A +LF ++ S G   +  +Y I+ING C+   + EA  L+ EM  KG
Sbjct: 459 VIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKG 518

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
             P   TYN +  G    ++    ++L +EM     +AD ST    ++ L  +G
Sbjct: 519 YSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 572



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 134/263 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTYN ++DG C    +D+A  +F  M  +   PDVV+Y++LI+G C      +A  
Sbjct: 310 EPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMY 369

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  + + P+ VT++ +M  LC  G++ +A  L   MV R   P+  +Y  L+D  C
Sbjct: 370 LFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLC 429

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +++ A  L  ++E      D   Y I+I+G C+  E+E A  L+  + SKG+ P V 
Sbjct: 430 KNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVW 489

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  +  GL +   +  A KLF EM+R   + +  TYN    G  +N   +  ++L + +
Sbjct: 490 TYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEM 549

Query: 253 GILKCELDIQAYNCLIDGLCKSG 275
                  D+     L++ L   G
Sbjct: 550 LARGFSADVSTSTVLVEMLSDDG 572



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 161/347 (46%), Gaps = 41/347 (11%)

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD---VRPNA 121
           N  ++A   F  M+     PS+  F  ++  + K   M   S +L L  Q D   + PN 
Sbjct: 47  NTLDDALSSFNRMLHMHPPPSIADFTKLLISITK---MKHYSTVLSLSHQMDSFGIPPNI 103

Query: 122 FTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 181
           +T + L++ FC   ++  A  +   +  +G + +  ++N LI G C   ++ E L L+ +
Sbjct: 104 YTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDK 163

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M+ +G +P VVTY TL  GL ++     A++L   M++ +   D   Y + ID LCK+  
Sbjct: 164 MIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 223

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLI--------------------------------- 268
           + +A  LF  +        I  YN LI                                 
Sbjct: 224 VTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFST 283

Query: 269 --DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
             D LCK G++  A ++   + +R +  +VVTYN ++ G C   +MD+A  +F  M    
Sbjct: 284 VVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKG 343

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            AP+V+ + TLI+G+ +I +  K + L  +M  K+++P+    S ++
Sbjct: 344 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLM 390



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 53/101 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY  +I+GLC++G + +A  LF +MK +  +P+  TYN +  G    N+     +L
Sbjct: 486 PNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQL 545

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
             EM+ +G    V T  V+++ L  +G      ++L   +Q
Sbjct: 546 LQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 38/186 (20%), Positives = 70/186 (37%), Gaps = 35/186 (18%)

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
           +S++NTF         + +A+  F  +  +     I  +  L+  + K       L L  
Sbjct: 33  SSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSH 92

Query: 286 SLPRRVLVADVVTYNIMIH-----------------------------------GLCNDG 310
            +    +  ++ T NI+I+                                   GLC +G
Sbjct: 93  QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEG 152

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++ +   LF  M      PNV+ + TLI+G  ++   S  I LL  M++    PD  + +
Sbjct: 153 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYT 212

Query: 371 MVVDLL 376
            ++D L
Sbjct: 213 SIIDSL 218


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  283 bits (723), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 144/365 (39%), Positives = 222/365 (60%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ V Y +IID LCK+  V +A  LF +M  + I+P + TYNSLIH LC+  +W    
Sbjct: 195 CQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVT 254

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM++  + P+VV F+ ++D LCK GK+ EA  ++D+M++R V PN  TY+ LMDG 
Sbjct: 255 ALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGH 314

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL  +++ A ++F +M   G   D VSY+ LINGYCK + +E+A+ L+ EM  K + P  
Sbjct: 315 CLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNT 374

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+TL  GL  + +++ A+ LF EM       D  +Y   +D LCKN  + EA+ L + 
Sbjct: 375 VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 434

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DIQ Y  +IDG+C++G LE A +LF +L  + L  +V TY IMI+GLC  G 
Sbjct: 435 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGL 494

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + +A  LF +M+    +PN   +  +  GF+R N+  + I+LL +M  +    D S  ++
Sbjct: 495 LAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTV 554

Query: 372 VVDLL 376
           +V++L
Sbjct: 555 LVEML 559



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 190/363 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   +  ++  + K        +L  QM    I P++ T N LI+  CH      A  +
Sbjct: 57  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 116

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G QP++ TFN ++  LC  GK+ E   L D M+    +PN  TY TL++G C 
Sbjct: 117 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 176

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A  L  SME   C+ D V Y  +I+  CK+++V +A +L+ EM+ +GI P++ T
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L   L  + + +H   L  EM    +  +   ++T +D LCK G ++EA ++   + 
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 296

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E ++  YN L+DG C    ++ A+++F ++  +    DVV+Y+ +I+G C   +++
Sbjct: 297 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 356

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA  LF +M    + PN + + TL+HG   + +    I L H+M  +  +PD     +++
Sbjct: 357 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 416

Query: 374 DLL 376
           D L
Sbjct: 417 DYL 419



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 82/234 (35%), Positives = 135/234 (57%), Gaps = 3/234 (1%)

Query: 10  VVCK---PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           +VCK   P+ V+Y+T+I+G CK   ++KA  LF +M  + + P+ VTY++L+HGLCH   
Sbjct: 330 MVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGR 389

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A  LF EM+ +G  P  V++ +++D LCKN ++DEA  LL  +   ++ P+   Y+ 
Sbjct: 390 LQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTI 449

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++DG C  G++  A +LF ++ S G   +  +Y I+ING C+   + EA  L+ EM  KG
Sbjct: 450 VIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKG 509

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
             P   TYN +  G    ++    ++L +EM     +AD ST    ++ L  +G
Sbjct: 510 YSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 563



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 134/263 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTYN ++DG C    +D+A  +F  M  +   PDVV+Y++LI+G C      +A  
Sbjct: 301 EPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMY 360

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  + + P+ VT++ +M  LC  G++ +A  L   MV R   P+  +Y  L+D  C
Sbjct: 361 LFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLC 420

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +++ A  L  ++E      D   Y I+I+G C+  E+E A  L+  + SKG+ P V 
Sbjct: 421 KNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVW 480

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  +  GL +   +  A KLF EM+R   + +  TYN    G  +N   +  ++L + +
Sbjct: 481 TYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEM 540

Query: 253 GILKCELDIQAYNCLIDGLCKSG 275
                  D+     L++ L   G
Sbjct: 541 LARGFSADVSTSTVLVEMLSDDG 563



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 161/347 (46%), Gaps = 41/347 (11%)

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD---VRPNA 121
           N  ++A   F  M+     PS+  F  ++  + K   M   S +L L  Q D   + PN 
Sbjct: 38  NTLDDALSSFNRMLHMHPPPSIADFTKLLISITK---MKHYSTVLSLSHQMDSFGIPPNI 94

Query: 122 FTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 181
           +T + L++ FC   ++  A  +   +  +G + +  ++N LI G C   ++ E L L+ +
Sbjct: 95  YTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDK 154

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M+ +G +P VVTY TL  GL ++     A++L   M++ +   D   Y + ID LCK+  
Sbjct: 155 MIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 214

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLI--------------------------------- 268
           + +A  LF  +        I  YN LI                                 
Sbjct: 215 VTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFST 274

Query: 269 --DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
             D LCK G++  A ++   + +R +  +VVTYN ++ G C   +MD+A  +F  M    
Sbjct: 275 VVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKG 334

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            AP+V+ + TLI+G+ +I +  K + L  +M  K+++P+    S ++
Sbjct: 335 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLM 381



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 53/101 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY  +I+GLC++G + +A  LF +MK +  +P+  TYN +  G    N+     +L
Sbjct: 477 PNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQL 536

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
             EM+ +G    V T  V+++ L  +G      ++L   +Q
Sbjct: 537 LQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 38/186 (20%), Positives = 70/186 (37%), Gaps = 35/186 (18%)

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
           +S++NTF         + +A+  F  +  +     I  +  L+  + K       L L  
Sbjct: 24  SSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSH 83

Query: 286 SLPRRVLVADVVTYNIMIH-----------------------------------GLCNDG 310
            +    +  ++ T NI+I+                                   GLC +G
Sbjct: 84  QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEG 143

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++ +   LF  M      PNV+ + TLI+G  ++   S  I LL  M++    PD  + +
Sbjct: 144 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYT 203

Query: 371 MVVDLL 376
            ++D L
Sbjct: 204 SIIDSL 209


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  282 bits (722), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 144/363 (39%), Positives = 216/363 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ V++  +ID LCK G VD A   F QM  E + P++  ++SL++GLC    W +A+ 
Sbjct: 368 SPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEE 427

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LFFE++DQG+    V FN +M  LC  G++ EA RL+DLM++  VRPN  +Y+TL+ G C
Sbjct: 428 LFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHC 487

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           LTG+I+ A +L   M S G K ++ +Y IL+ GYCK + V++A SL+REM+ KG+ P V 
Sbjct: 488 LTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVA 547

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNT+  GLF+  +   A +L+  M       D  TYN  ++GLCKN ++ EA ++FR L
Sbjct: 548 TYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRL 607

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +LD   +N +I  L K GR E A++LF ++    LV DVVTY ++   L  +G +
Sbjct: 608 CSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSL 667

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +   LF  ME++  APN  +   L+   +     S+    L+K+ EK    +AS  SM+
Sbjct: 668 GEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSML 727

Query: 373 VDL 375
           + L
Sbjct: 728 ISL 730



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 194/398 (48%), Gaps = 35/398 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY T+IDGLCK   VD+AK +F QM    + PD  TYN LIHG      W E  ++
Sbjct: 194 PNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQM 253

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG--- 130
             EM   G++P  +T+ +++D LCKNG+  EA    D M ++ ++P+   Y+ L+ G   
Sbjct: 254 LEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYAT 313

Query: 131 -----------------------------FCLTGK---INRAEELFGSMESMGCKHDDVS 158
                                        FC   K   I  A  +F  M   G   D VS
Sbjct: 314 KGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVS 373

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +  LI+  CK   V++A+  + +M+++G+ P +  +++L  GL  + + E A +LF E+ 
Sbjct: 374 FGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVL 433

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  D   +NT +  LC  G ++EA  L   +  +    ++ +YN L+ G C +GR++
Sbjct: 434 DQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRID 493

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +L   +    L  +  TY I++ G C   ++D A+ LF +M    V P V  + T++
Sbjct: 494 EAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTIL 553

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           HG  +  + S+  EL   M   +   D    +++++ L
Sbjct: 554 HGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGL 591



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 195/434 (44%), Gaps = 70/434 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE--- 69
           +P+ +TY  ++D LCK G   +A+  F  M  + I PDV  Y  L+HG       +E   
Sbjct: 263 EPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHS 322

Query: 70  --------------------------------AKRLFFEMMDQGVQPSVVTFNVIMDELC 97
                                           A  +F +M  QG+ P VV+F  ++D LC
Sbjct: 323 FLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALC 382

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS----------- 146
           K G++D+A    + M+   V PN F +S+L+ G C  GK  +AEELF             
Sbjct: 383 KLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAV 442

Query: 147 ------------------------MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
                                   M  +G + + +SYN L+ G+C    ++EA  L   M
Sbjct: 443 FFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVM 502

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
           VS G+KP   TY  L  G  +  +V+ A  LF EM    V    +TYNT + GL + G  
Sbjct: 503 VSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRF 562

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            EA EL+  +   + + DI  YN +++GLCK+  ++ A ++FR L  +    D VT+NIM
Sbjct: 563 SEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIM 622

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I  L   G+ + A DLF  +    + P+V+ +  +    +      +   L   M++   
Sbjct: 623 IGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGT 682

Query: 363 MPDASIVSMVVDLL 376
            P++ +++ +V  L
Sbjct: 683 APNSHMLNALVRRL 696



 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 194/405 (47%), Gaps = 40/405 (9%)

Query: 1   MANGNGEIGVVCKP----NTVTYNTIIDGLCKEGFVDKAK-ALFLQMKGENINPDVVTYN 55
           + +G    G++ K     N +  + ++ GLC    VD+A   L L+M      PDVV YN
Sbjct: 106 LEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYN 165

Query: 56  SLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           ++I+G        +A  LF EMMDQG+ P+VVT+  ++D LCK   +D A  +   M+ R
Sbjct: 166 TVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDR 225

Query: 116 DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
            V+P+  TY+ L+ G+  TGK     ++   M + G + D ++Y +L++  CKN    EA
Sbjct: 226 GVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREA 285

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLG------LFEIHQ----------------------- 206
              +  M  KGIKP V  Y  L  G      L E+H                        
Sbjct: 286 RLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCA 345

Query: 207 ------VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
                 +E A+ +F +M++  ++ D  ++   ID LCK G + +AV  F  +       +
Sbjct: 346 YAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPN 405

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           I  ++ L+ GLC  G+ E A ELF  +  + +  D V +N ++  LCN+G++ +A  L  
Sbjct: 406 IFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLID 465

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            M    V PNVI + TL+ G     +  +  +LL  M    + P+
Sbjct: 466 LMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPN 510



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 172/352 (48%), Gaps = 7/352 (1%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR---LFFEMMDQ---GVQPS 85
           +D+A  LF ++        V  +N L+  +  A   + ++R   LF  M  +    V P+
Sbjct: 30  LDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPN 89

Query: 86  VVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEE-LF 144
             T+++++   C+ G+++       L+++   R N    S L+ G C   +++ A + L 
Sbjct: 90  ACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILL 149

Query: 145 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 204
             M   GC  D V+YN +ING+ +  +VE+A +L+ EM+ +GI P VVTY T+  GL + 
Sbjct: 150 LRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKA 209

Query: 205 HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
             V+ A  +F++M    V  D  TYN  I G    G   E V++   +     E D   Y
Sbjct: 210 QVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITY 269

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
             L+D LCK+GR   A   F S+ R+ +  DV  Y I++HG    G + + H     M  
Sbjct: 270 ALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVG 329

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           N V+PN  IF  +   + +     + + + +KM+++ + PD      ++D L
Sbjct: 330 NGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDAL 381



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 121/238 (50%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           I V  +PN ++YNT++ G C  G +D+A  L   M    + P+  TY  L+ G C A   
Sbjct: 468 IRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRV 527

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  LF EM+ +GV P V T+N I+  L + G+  EA+ L   M+    + + +TY+ +
Sbjct: 528 DDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNII 587

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++G C    ++ A ++F  + S   + D V++NI+I    K    E+A+ L+  + + G+
Sbjct: 588 LNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGL 647

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            P VVTY  +   L E   +     LF  M++   A ++   N  +  L   G I  A
Sbjct: 648 VPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRA 705



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 112/236 (47%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN  TY  ++ G CK   VD A +LF +M  + + P V TYN+++HGL     ++EA  
Sbjct: 508 KPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANE 567

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L+  M++   +  + T+N+I++ LCKN  +DEA ++   +  +D + ++ T++ ++    
Sbjct: 568 LYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALL 627

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+   A +LF ++ + G   D V+Y ++     +   + E   L+  M   G  P   
Sbjct: 628 KGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSH 687

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
             N L   L     +  A     ++   + + + ST +  I    +  Y   A  L
Sbjct: 688 MLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGEYQPHAKSL 743


>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
 gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
          Length = 455

 Score =  281 bits (719), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 140/364 (38%), Positives = 217/364 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ V+Y  +ID LCK G VD A+  F QM  E + P++V ++SL++GLC  + W + + 
Sbjct: 62  SPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEE 121

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LFFEM++ G+ P++V FN I+  LCK G++ E  RL+D +    VRP+  +Y+TL+DG C
Sbjct: 122 LFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHC 181

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G I+ A +L   M S+G K +  SYN L++GYCK   ++ A SL+R+M+S GI P VV
Sbjct: 182 LAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVV 241

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNT+  GLF+  +   A +L+  M          TYNT ++GLCK+  + EA ++F++L
Sbjct: 242 TYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSL 301

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +L+I  +  +I  L K GR E A++LF ++P   LV DVVTY ++   L  +G +
Sbjct: 302 CSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSL 361

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++   LF  ME+N  APN  +   L+   +     S+    L K+ E+    +AS  SM+
Sbjct: 362 EEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSML 421

Query: 373 VDLL 376
           + + 
Sbjct: 422 ISIF 425



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 154/305 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V +NTI+  LCKEG V + + L   ++   + PDV++YN+LI G C A   +EA +L
Sbjct: 133 PNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKL 192

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+  G++P+  ++N ++   CK G++D A  L   M+   + P   TY+T++ G   
Sbjct: 193 LEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQ 252

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           T + + A+EL+ +M + G K    +YN ++NG CK+  V+EA  +++ + SKG++  ++T
Sbjct: 253 TKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIIT 312

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  +   L +  + E A+ LF  +  + +  D  TY    + L + G + E   LF  + 
Sbjct: 313 FTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAME 372

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 + Q  N L+  L   G +  A      L  R    +  T +++I    +D    
Sbjct: 373 KNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQH 432

Query: 314 KAHDL 318
            A  L
Sbjct: 433 HAKSL 437



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 155/304 (50%)

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
           ++HG  +    +E   L   M+  G+ P+   FN+      K G +D+A  + + M Q  
Sbjct: 1   MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           + P+A +Y  L+D  C  G+++ AE  F  M + G   + V ++ L+ G C   + E+  
Sbjct: 61  LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            L+ EM++ GI P +V +NT+   L +  +V    +L + ++   V  D  +YNT IDG 
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 180

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           C  G I EA +L   +  +  + +  +YN L+ G CK+GR++ A  LFR +    +   V
Sbjct: 181 CLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGV 240

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           VTYN ++HGL    +  +A +L+L+M  +     +  + T+++G  + N   +  ++   
Sbjct: 241 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQS 300

Query: 357 MKEK 360
           +  K
Sbjct: 301 LCSK 304



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 124/250 (49%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G + V  KPN+ +YNT++ G CK G +D A +LF +M    I P VVTYN+++HGL    
Sbjct: 195 GMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTK 254

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            ++EAK L+  M++ G +  + T+N I++ LCK+  +DEA ++   +  + ++ N  T++
Sbjct: 255 RFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFT 314

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            ++      G+   A +LF ++ + G   D V+Y ++     +   +EE  SL+  M   
Sbjct: 315 IMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKN 374

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G  P     N L   L     +  A     ++   + + + ST +  I     + Y   A
Sbjct: 375 GTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHA 434

Query: 246 VELFRTLGIL 255
             L +   IL
Sbjct: 435 KSLPKKYRIL 444


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  281 bits (719), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 139/364 (38%), Positives = 222/364 (60%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY+ +ID LCK+  +D A  L  +MK +NI P++ TYNSLI GLC    W + K 
Sbjct: 200 KPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKT 259

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM++  + P+V TF++++D LCK GK+++A  ++  M+++ V P+  TYS +MDG+C
Sbjct: 260 LLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYC 319

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G+++RA  +F  +   G K +  SY+ILINGYCK K + +A+ L+ E+  KG+KP  V
Sbjct: 320 LRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTV 379

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+T+  GL E+ ++  A K+F+EM R     D   ++T + G  K G + EA+ LF  L
Sbjct: 380 TYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKL 439

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + + +I  Y  +I+GLCK+ R+  A  +F  LP   L+ DV TYN+MI G C +G  
Sbjct: 440 ERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLF 499

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+   +   ME+N    N I +  ++ GF R NK S+++  + +M  +    DA+   ++
Sbjct: 500 DEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVL 559

Query: 373 VDLL 376
           +++L
Sbjct: 560 INVL 563



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 197/361 (54%), Gaps = 3/361 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENI-NPDVVTYNSLIHGLCHANDWNEAKRL 73
           N VT+NT++ GL  E  V  A  LF ++  E I  P+ V Y ++++GL       +   L
Sbjct: 131 NVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSL 190

Query: 74  FFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +M+QG  +P V T+++++D LCK+  +D A  LL+ M Q+++ PN FTY++L+DG C
Sbjct: 191 L-RIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLC 249

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+  + + L   M ++    +  +++ILI+G CK  +VE+A  + R M+ KG++P ++
Sbjct: 250 KLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDII 309

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ +  G     QV+ A ++F  ++   +  +  +Y+  I+G CK   + +A++LF  +
Sbjct: 310 TYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEI 369

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D   Y+ ++ GL + GR+  A ++F  + R     D+  ++ ++ G    G +
Sbjct: 370 SQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLV 429

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A  LF  +E N    N+  +  +I+G  + ++  +   +  K+    ++PD    +++
Sbjct: 430 EEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVM 489

Query: 373 V 373
           +
Sbjct: 490 I 490



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 176/343 (51%), Gaps = 1/343 (0%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D A +LF +M      P V+ ++ L   + +   ++    LF EM   G+  S    N+
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM-ESM 150
           + +  C   ++D A  +L + ++  +  N  T++TL+ G     K+  A  LF  +    
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
            C+ ++V Y  ++NG  K    E+ LSL R M     KP V TY+ +   L +   ++ A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           + L  EM++ ++  +  TYN+ IDGLCK G   +   L   +  L    ++  ++ LIDG
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LCK G++E A E+ R +  + +  D++TY+ ++ G C  GQ+D+A  +F  + +  + PN
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPN 342

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +  +  LI+G+ +    +K ++L  ++ +K + PD    S ++
Sbjct: 343 IFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTIL 385



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 182/358 (50%), Gaps = 1/358 (0%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N + +  C    +D A ++        I  +VVT+N+L+ GL   N   +A  LF +++ 
Sbjct: 101 NIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVR 160

Query: 80  QGV-QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           + + +P+ V +  +M+ L K G  ++   LL +M Q + +P+  TYS ++D  C    ++
Sbjct: 161 EKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLD 220

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A  L   M+      +  +YN LI+G CK  + E+  +L  EMV+  I P V T++ L 
Sbjct: 221 AAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILI 280

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            GL +  +VE A ++   M    V  D  TY+  +DG C  G +  A  +F  L     +
Sbjct: 281 DGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIK 340

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            +I +Y+ LI+G CK   L  A++LF  + ++ L  D VTY+ ++HGL   G++  A  +
Sbjct: 341 PNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKI 400

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           F +M      P++ +  TL+ G+ +     + + L  K++  +   + S  ++V++ L
Sbjct: 401 FDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGL 458



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 1/274 (0%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D+A  L   MV+    P+   +S L          +    LF  M  +G    D   NI
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           + N YC    ++ A S+    +  GI   VVT+NTL  GLF  ++V  A+ LF+++ R+ 
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 222 VAADTST-YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
           +       Y T ++GL K G+  + + L R +     + D++ Y+ +ID LCK   L+ A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           + L   + ++ +  ++ TYN +I GLC  GQ +K   L  +M    + PNV  F  LI G
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +  K     E++  M EK V PD    S ++D
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMD 316



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 120/234 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN  +Y+ +I+G CK+  + KA  LF ++  + + PD VTY++++HGL       +AK+
Sbjct: 340 KPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKK 399

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM+  G  P +   + ++    K G ++EA  L   + +     N   Y+ +++G C
Sbjct: 400 IFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLC 459

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++  A  +F  + S+G   D  +YN++I G+C+    +E   + R+M   G     +
Sbjct: 460 KNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNI 519

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           TYN +  G F  +++   +   +EM     + D +T    I+ L +N  IV+ +
Sbjct: 520 TYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKENPSIVDMI 573



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 1/175 (0%)

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ 262
           E+  ++ A+ LF  M R         ++     +    +    V LFR + IL   +   
Sbjct: 39  EVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDS 98

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
             N + +  C   R++ A  +     +  +  +VVT+N ++ GL  + ++  A  LF  +
Sbjct: 99  ILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKL 158

Query: 323 -EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             E    PN +++ T+++G  +     K + LL  M++    PD    S+V+D L
Sbjct: 159 VREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDAL 213


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  281 bits (718), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 147/352 (41%), Positives = 218/352 (61%), Gaps = 6/352 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + KPN   YNTIID LCK   V +A  LF +M  + I+ DVVTY +LI+G C A+   
Sbjct: 192 GRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLK 251

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  L  EM+ + + P+V T+N+++D LCK GK+ EA  +L +M++  V+P+  TYSTLM
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLM 311

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+ L  ++ +A+ +F +M  MG   D  SY ILING+CKNK V+EAL+L++EM  K + 
Sbjct: 312 DGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMV 371

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P +VTY++L  GL +  ++ +   L +EM+   + A+  TYN+ IDGLCKNG++  A+ L
Sbjct: 372 PGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIAL 431

Query: 249 FRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           F  +   GI  C      +  L+DGLCK GRL+ A E F+ L  +    DV  YN+MI+G
Sbjct: 432 FNKMKDQGIRPCSF---TFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMING 488

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            C  G +++A  +   MEEN   PN + F  +I+   + ++  K  +LL +M
Sbjct: 489 HCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/331 (34%), Positives = 183/331 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+T+T+ T+I GLC +G V+KA     ++  + I  D V+Y +LI+G+C   D   A +
Sbjct: 126 QPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIK 185

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  ++  +  +P+V  +N I+D LCK   + EA  L   M  + +  +  TY+TL+ GFC
Sbjct: 186 LVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFC 245

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  K+  A  L   M       +  +YNIL++  CK  +V+EA ++   M+   +KP V+
Sbjct: 246 IASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVI 305

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+TL  G F +++++ A  +F  M    V  D  +Y   I+G CKN  + EA+ LF+ +
Sbjct: 306 TYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEM 365

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   I  Y+ LIDGLCKSGR+    +L   +  R + A+V+TYN +I GLC +G +
Sbjct: 366 HQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHL 425

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           D+A  LF  M++  + P    F  L+ G  +
Sbjct: 426 DRAIALFNKMKDQGIRPCSFTFTILLDGLCK 456



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 197/367 (53%), Gaps = 6/367 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V+Y T+I+G+CK G    A  L  ++ G    P+V  YN++I  LC     +EA  
Sbjct: 161 KFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYG 220

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  +G+   VVT+  ++   C   K+ EA  LL+ MV + + PN +TY+ L+D  C
Sbjct: 221 LFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A+ +   M     K D ++Y+ L++GY    E+++A  ++  M   G+ P V 
Sbjct: 281 KEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVH 340

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG---YIVEAVELF 249
           +Y  L  G  +   V+ AL LF+EM + ++     TY++ IDGLCK+G   Y+ + ++  
Sbjct: 341 SYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           R  GI     ++  YN LIDGLCK+G L+ A+ LF  +  + +     T+ I++ GLC  
Sbjct: 401 RDRGI---PANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKG 457

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++  A + F D+       +V  +  +I+G  +     + + +L KM+E   +P+A   
Sbjct: 458 GRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTF 517

Query: 370 SMVVDLL 376
            ++++ L
Sbjct: 518 DIIINAL 524



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 191/362 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ +T N +I+  C  G +    ++  ++      P  +T+ +LI GLC     N+A  
Sbjct: 91  QPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALH 150

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +++ QG++   V++  +++ +CK G    A +L+  +  R  +PN   Y+T++D  C
Sbjct: 151 FHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALC 210

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               ++ A  LF  M + G   D V+Y  LI G+C   +++EA+ L  EMV K I P V 
Sbjct: 211 KYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVY 270

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L   L +  +V+ A  +   M +  V  D  TY+T +DG      + +A  +F  +
Sbjct: 271 TYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAM 330

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            ++    D+ +Y  LI+G CK+  ++ AL LF+ + ++ +V  +VTY+ +I GLC  G++
Sbjct: 331 SLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
               DL  +M +  +  NVI + +LI G  +     + I L +KMK++ + P +   +++
Sbjct: 391 SYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTIL 450

Query: 373 VD 374
           +D
Sbjct: 451 LD 452



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 154/280 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN ++D LCKEG V +AK +   M    + PDV+TY++L+ G     +  +A+ +
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHV 326

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   GV P V ++ ++++  CKN  +DEA  L   M Q+++ P   TYS+L+DG C 
Sbjct: 327 FNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G+I+   +L   M   G   + ++YN LI+G CKN  ++ A++L+ +M  +GI+P   T
Sbjct: 387 SGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFT 446

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  GL +  +++ A + F+++       D   YN  I+G CK G + EA+ +   + 
Sbjct: 447 FTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKME 506

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
              C  +   ++ +I+ L K    + A +L R +  R L+
Sbjct: 507 ENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546



 Score =  107 bits (267), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 118/240 (49%)

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           ++ A   F  M  M      + +N +++ + K K    A+SL   +  KGI+P ++T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L      + Q+     +  ++ +      T T+ T I GLC  G + +A+     L    
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            + D  +Y  LI+G+CK G    A++L R +  R+   +V  YN +I  LC    + +A+
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            LF +M    ++ +V+ + TLI+GF   +K  + I LL++M  K + P+    +++VD L
Sbjct: 220 GLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 58/103 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P + T+  ++DGLCK G +  A+  F  +  +  + DV  YN +I+G C      EA  
Sbjct: 441 RPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALT 500

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           +  +M + G  P+ VTF++I++ L K  + D+A +LL  M+ R
Sbjct: 501 MLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICR 543


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  281 bits (718), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 140/365 (38%), Positives = 224/365 (61%), Gaps = 1/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ V Y +IID LCK+  V +A  LF +M G+ I+PD+ TY SLIH LC+  +W    
Sbjct: 205 CQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVT 264

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +M++  + P VV F+ ++D LCK GK+ EA  ++D+M+ R V PN  TY+ LMDG 
Sbjct: 265 TLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGH 324

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL  +++ A ++F +M   G   + +SYN LINGYCK + +++A  L+ EM  K + P  
Sbjct: 325 CLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNT 384

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL +    + +++ A+ LF EM       D +TY   +D LCK  ++ EA+ L +T
Sbjct: 385 VTYNTL-MHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKT 443

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DIQ Y  +IDG+C++G LE A ++F +L  + L  +V TY IMI+GLC  G 
Sbjct: 444 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGL 503

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A+ LF++M+ N  +P+   + T+  G ++  +  + I+LL +M  +    D S  ++
Sbjct: 504 LDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTL 563

Query: 372 VVDLL 376
           +V++L
Sbjct: 564 LVEML 568



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 189/363 (52%), Gaps = 1/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TV +N ++  + K        +L  QM    I PDV T N LI+  CH N    A  +
Sbjct: 67  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G QP   TF  ++  LC  GK+ +A  L D M+    +PN  TY TL++G C 
Sbjct: 127 LAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 186

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  N A  L  SME   C+ D V Y  +I+  CK+++V EA +L+ +MV +GI P + T
Sbjct: 187 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 246

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +L   L  + + +H   L  +M    +  D   ++T +D LCK G I EA ++   + 
Sbjct: 247 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 306

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           I   E ++  YN L+DG C    ++ A+++F ++       +V++YN +I+G C   +MD
Sbjct: 307 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 366

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA  LF +M +  + PN + + TL+H    + +    I L H+M     +PD +   +++
Sbjct: 367 KATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILL 425

Query: 374 DLL 376
           D L
Sbjct: 426 DYL 428



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 130/226 (57%), Gaps = 1/226 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN ++YNT+I+G CK   +DKA  LF +M  + + P+ VTYN+L+H  CH     +A  L
Sbjct: 347 PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIAL 405

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+  G  P + T+ +++D LCK   +DEA  LL  +   ++ P+   Y+ ++DG C 
Sbjct: 406 FHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCR 465

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A ++F ++ S G + +  +Y I+ING C+   ++EA  L+ EM   G  P   T
Sbjct: 466 AGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCT 525

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
           YNT+  GL +  +   A++L +EM     +AD ST    ++ LC +
Sbjct: 526 YNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDD 571



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 168/353 (47%), Gaps = 40/353 (11%)

Query: 54  YNSLIHGLCHA-----NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           ++SL H   H+     N  ++A   F  M+     PS V FN ++  + K  +      L
Sbjct: 32  FSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSL 91

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
            + M    + P+ +T + L++ FC   ++  A  +   +  +G + D  ++  LI G C 
Sbjct: 92  SNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCV 151

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             ++ +AL L+ +M+ +G +P VVTY TL  GL ++     A++L   M++ +   D   
Sbjct: 152 EGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVV 211

Query: 229 YNTFIDGLCKNGYIVEAVELFRTL---GILK---------------CEL----------- 259
           Y + ID LCK+  + EA  LF  +   GI                 CE            
Sbjct: 212 YTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI 271

Query: 260 ------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+  ++ ++D LCK G++  A ++   +  R +  +VVTYN ++ G C   +MD
Sbjct: 272 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMD 331

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +A  +F  M  N  APNVI + TLI+G+ +I +  K   L  +M +K+++P+ 
Sbjct: 332 EAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNT 384



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 149/294 (50%), Gaps = 36/294 (12%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V ++T++D LCKEG + +A  +   M    + P+VVTYN+L+ G C  ++ +EA ++
Sbjct: 277 PDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKV 336

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+  G  P+V+++N +++  CK  +MD+A+ L + M Q+++ PN  TY+TLM   C 
Sbjct: 337 FDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCH 395

Query: 134 TGKINRAEELFGSMESMG---------------CKHDDVS-------------------- 158
            G++  A  LF  M + G               CK   +                     
Sbjct: 396 VGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQI 455

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y I+I+G C+  E+E A  ++  + SKG++P V TY  +  GL     ++ A KLF EM 
Sbjct: 456 YTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMD 515

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
            +  + D  TYNT   GL +N   + A++L + +       D+     L++ LC
Sbjct: 516 GNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 569



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 131/273 (47%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D+A    + M+     P+   ++ L+     T +      L   M+S G   D  + NI
Sbjct: 50  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LIN +C    +  A S+  +++  G +P   T+ TL  GL    ++  AL LF++M  + 
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              +  TY T I+GLCK G    A+ L R++    C+ D+  Y  +ID LCK  ++  A 
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            LF  +  + +  D+ TY  +IH LCN  +      L   M  + + P+V+IF T++   
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +  K ++  +++  M  + V P+    + ++D
Sbjct: 290 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMD 322



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 92/170 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY  ++D LCK+  +D+A AL   ++G N++PD+  Y  +I G+C A +   A+ +
Sbjct: 416 PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 475

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  +  +G++P+V T+ ++++ LC+ G +DEA++L   M      P+  TY+T+  G   
Sbjct: 476 FSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQ 535

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
             +  RA +L   M + G   D  +  +L+   C +K  +    +  E V
Sbjct: 536 NKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFV 585



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 1/95 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TY  +I+GLC+ G +D+A  LF++M G   +PD  TYN++  GL    +   A +
Sbjct: 485 RPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQ 544

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR 107
           L  EM+ +G    V T  ++++ LC + K+D++ +
Sbjct: 545 LLQEMLARGFSADVSTTTLLVEMLCDD-KLDQSVK 578



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 75/185 (40%)

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +++N         + ++ AL  F  M        T  +N  +  + K         L   
Sbjct: 35  LSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQ 94

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D+   N LI+  C   RL  A  +   + +     D  T+  +I GLC +G+
Sbjct: 95  MDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGK 154

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +  A  LF  M      PNV+ + TLI+G  ++   +  I LL  M++    PD  + + 
Sbjct: 155 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 214

Query: 372 VVDLL 376
           ++D L
Sbjct: 215 IIDSL 219


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  280 bits (717), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 142/364 (39%), Positives = 219/364 (60%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + + V YNTIIDGLCK   +D A  LF +M  + I PDV TY+SLI  LC+   W++A R
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+++ + P+VVTF+ ++D   K GK+ EA +L D M++R + P+ FTYS+L++GFC
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  +++ A+ +F  M S  C  + V+Y+ LI G+CK K VEE + L+REM  +G+    V
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  G F+    ++A  +F++M    V  +  TYN  +DGLCKNG + +A+ +F  L
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                E DI  YN +I+G+CK+G++E   ELF +L  + +  +V+ YN MI G C  G  
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A  L   M+E+   PN   + TLI   +R        EL+ +M+      DAS + +V
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614

Query: 373 VDLL 376
            ++L
Sbjct: 615 TNML 618



 Score =  265 bits (676), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 135/362 (37%), Positives = 213/362 (58%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ VTY T+++GLCK G +D A +L  +M+   I  DVV YN++I GLC     ++A 
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM ++G++P V T++ ++  LC  G+  +ASRLL  M++R + PN  T+S L+D F
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GK+  AE+L+  M       D  +Y+ LING+C +  ++EA  ++  M+SK   P V
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 398

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+TL  G  +  +VE  ++LF EM +  +  +T TY T I G  +      A  +F+ 
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +    +I  YN L+DGLCK+G+L  A+ +F  L R  +  D+ TYNIMI G+C  G+
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           ++   +LF ++    V+PNVI + T+I GF R     +   LL KMKE   +P++   + 
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578

Query: 372 VV 373
           ++
Sbjct: 579 LI 580



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 191/359 (53%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY+  I+  C+   +  A A+  +M      PD+VT +SL++G CH+   ++A  L  +M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           ++ G +P   TF  ++  L  + K  EA  L+D MVQR  +P+  TY T+++G C  G I
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  L   ME    + D V YN +I+G CK K +++AL+L+ EM +KGI+P V TY++L
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
              L    +   A +L  +M    +  +  T++  ID   K G +VEA +L+  +     
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           + DI  Y+ LI+G C   RL+ A  +F  +  +    +VVTY+ +I G C   ++++  +
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           LF +M +  +  N + + TLIHGF +         +  +M    V P+    ++++D L
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 185/347 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +N ++  + K    +   +L  QM+   I+ D+ TY+  I+  C  +  + A  +
Sbjct: 81  PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +MM  G +P +VT + +++  C + ++ +A  L+D MV+   +P+ FT++TL+ G  L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K + A  L   M   GC+ D V+Y  ++NG CK  +++ ALSL ++M    I+  VV 
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+  GL +   ++ AL LF EM    +  D  TY++ I  LC  G   +A  L   + 
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K   ++  ++ LID   K G+L  A +L+  + +R +  D+ TY+ +I+G C   ++D
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +A  +F  M      PNV+ + TLI GF +  +  + +EL  +M ++
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 164/307 (53%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  LF +M+     PS+V FN ++  + K  K +    L + M    +  + +TYS  
Sbjct: 65  DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++ FC   +++ A  +   M  +G + D V+ + L+NGYC +K + +A++L  +MV  G 
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP   T+ TL  GLF  ++   A+ L ++M +     D  TY T ++GLCK G I  A+ 
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L + +   K E D+  YN +IDGLCK   ++ AL LF  +  + +  DV TY+ +I  LC
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           N G+   A  L  DM E  + PNV+ F  LI  FV+  K  +  +L  +M ++ + PD  
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364

Query: 368 IVSMVVD 374
             S +++
Sbjct: 365 TYSSLIN 371



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 176/342 (51%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           VD A  LF  M      P +V +N L+  +   N +     L  +M   G+   + T+++
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
            ++  C+  ++  A  +L  M++    P+  T S+L++G+C + +I+ A  L   M  MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            K D  ++  LI+G   + +  EA++L  +MV +G +P +VTY T+  GL +   ++ AL
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            L ++M++  + AD   YNT IDGLCK  ++ +A+ LF  +       D+  Y+ LI  L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C  GR   A  L   +  R +  +VVT++ +I     +G++ +A  L+ +M + ++ P++
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
             + +LI+GF   ++  +   +   M  K   P+    S ++
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 126/217 (58%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY+T+I G CK   V++   LF +M    +  + VTY +LIHG   A D + A+
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F +M+  GV P+++T+N+++D LCKNGK+ +A  + + + +  + P+ +TY+ +++G 
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+    ELF ++   G   + ++YN +I+G+C+    EEA SL ++M   G  P  
Sbjct: 514 CKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
            TYNTL          E + +L +EM+    A D ST
Sbjct: 574 GTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 157/328 (47%), Gaps = 23/328 (7%)

Query: 70  AKRLFFEMMDQGV--QPSVVTF---------------------NVIMDELCKNGKMDEAS 106
           AKRLF     QG+   P+V +F                      ++ + L    K+D+A 
Sbjct: 9   AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAV 68

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
            L   MV+    P+   ++ L+       K      L   M+++G  HD  +Y+I IN +
Sbjct: 69  DLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           C+  ++  AL++  +M+  G +P +VT ++L  G     ++  A+ L ++M       DT
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            T+ T I GL  +    EAV L   +    C+ D+  Y  +++GLCK G +++AL L + 
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           + +  + ADVV YN +I GLC    MD A +LF +M+   + P+V  + +LI       +
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVD 374
            S    LL  M E+K+ P+    S ++D
Sbjct: 309 WSDASRLLSDMIERKINPNVVTFSALID 336



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 82/157 (52%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V   PN +TYN ++DGLCK G + KA  +F  ++   + PD+ TYN +I G+C A   
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            +   LF  +  +GV P+V+ +N ++   C+ G  +EA  LL  M +    PN+ TY+TL
Sbjct: 520 EDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTL 579

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
           +      G    + EL   M S G   D  +  ++ N
Sbjct: 580 IRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 3/99 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN + YNT+I G C++G  ++A +L  +MK +   P+  TYN+LI       D   +  L
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAEL 595

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM 112
             EM   G      T  ++ + L  +G++D++   LD++
Sbjct: 596 IKEMRSCGFAGDASTIGLVTNML-HDGRLDKS--FLDML 631


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 144/364 (39%), Positives = 218/364 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V Y+ IIDGLCK+G +D A  LF +M+ +    D++TYN+LI G C+A  W++  +
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ + + P+VVTF+V++D   K GK+ EA +LL  M+QR + PN  TY++L+DGFC
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++  A ++   M S GC  D +++NILINGYCK   +++ L L+REM  +G+    V
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  +  ++E A KLF+EM    V  D  +Y   +DGLC NG + +A+E+F  +
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K ELDI  Y  +I G+C + +++ A +LF SLP + +  D   YNIMI  LC    +
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            KA  LF  M E   AP+ + +  LI   +  +  +   EL+ +MK      D S V MV
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619

Query: 373 VDLL 376
           +++L
Sbjct: 620 INML 623



 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 124/353 (35%), Positives = 198/353 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY  +++ +CK G    A  L  +M+  NI  D V Y+ +I GLC     + A  
Sbjct: 225 QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFN 284

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  +G +  ++T+N ++   C  G+ D+ ++LL  M++R + PN  T+S L+D F 
Sbjct: 285 LFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFV 344

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A++L   M   G   + ++YN LI+G+CK   +EEA+ +   M+SKG  P ++
Sbjct: 345 KEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N L  G  + ++++  L+LF EM    V A+T TYNT + G C++G +  A +LF+ +
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   DI +Y  L+DGLC +G LE ALE+F  + +  +  D+  Y I+IHG+CN  ++
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           D A DLF  +    V  +   +  +I    R +  SK   L  KM E+   PD
Sbjct: 525 DDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPD 577



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 209/361 (57%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+TV +NT+++GLC E  V +A  L  +M      P ++T N+L++GLC     ++A  
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M++ G QP+ VT+  +++ +CK+G+   A  LL  M +R+++ +A  YS ++DG C
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A  LF  ME  G K D ++YN LI G+C     ++   L R+M+ + I P VV
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++ L     +  ++  A +L +EM +  +A +T TYN+ IDG CK   + EA+++   +
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C+ DI  +N LI+G CK+ R++  LELFR +  R ++A+ VTYN ++ G C  G++
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A  LF +M    V P+++ +  L+ G     +  K +E+  K+++ K+  D  I  ++
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514

Query: 373 V 373
           +
Sbjct: 515 I 515



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 177/343 (51%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
            D A  LF  M      P V+ +N L   +     +     L  +M  +G+  S+ T ++
Sbjct: 69  ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C+  K+  A   +  +++    P+   ++TL++G CL  +++ A EL   M  MG
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            K   ++ N L+NG C N +V +A+ L   MV  G +P  VTY  +   + +  Q   A+
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           +L  +M+  ++  D   Y+  IDGLCK+G +  A  LF  + I   + DI  YN LI G 
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C +GR +   +L R + +R +  +VVT++++I     +G++ +A  L  +M +  +APN 
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           I + +LI GF + N+  + I+++  M  K   PD    +++++
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 121/225 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +T+N +I+G CK   +D    LF +M    +  + VTYN+L+ G C +     AK
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +LF EM+ + V+P +V++ +++D LC NG++++A  +   + +  +  +   Y  ++ G 
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++ A +LF S+   G K D  +YNI+I+  C+   + +A  L+R+M  +G  P  
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDE 578

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           +TYN L            A +L EEM+     AD ST    I+ L
Sbjct: 579 LTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 138/274 (50%)

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K D+A  L   M+Q    P    ++ L      T +      L   MES G  H   + +
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           I+IN +C+ +++  A S   +++  G +P  V +NTL  GL    +V  AL+L + M   
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
                  T NT ++GLC NG + +AV L   +     + +   Y  +++ +CKSG+  +A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           +EL R +  R +  D V Y+I+I GLC DG +D A +LF +ME      ++I + TLI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           F    +     +LL  M ++K+ P+    S+++D
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLID 341



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 122/270 (45%), Gaps = 7/270 (2%)

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD--VSYNILIN 164
           R L     R V+P      TL         IN   EL    E       D  +SY   ++
Sbjct: 7   RRLSSQASRFVQPRLLETGTLRIAL-----INCPNELLFCCERGFSTFSDRNLSYRDKLS 61

Query: 165 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAA 224
                 + ++A+ L+R+M+     PTV+ +N LF  + +  Q E  L L ++M+   +A 
Sbjct: 62  SGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAH 121

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
              T +  I+  C+   +  A      +  L  E D   +N L++GLC   R+  ALEL 
Sbjct: 122 SIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELV 181

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
             +        ++T N +++GLC +G++  A  L   M E    PN + +  +++   + 
Sbjct: 182 DRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS 241

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            + +  +ELL KM+E+ +  DA   S+++D
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIID 271


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 142/364 (39%), Positives = 218/364 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +  TY+TIID LC++G +D A +LF +M+ + I   +VTYNSL+ GLC A  WN+  +
Sbjct: 202 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQ 261

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M  + + P+V+TFNV++D   K GK+ EA+ L   M+ + + PN  TY++LMDG+C
Sbjct: 262 LLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYC 321

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  +++ A  +   M    C  D V++  LI GYCK K V+E + L+R++  +G+    V
Sbjct: 322 MQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTV 381

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L  G  +  ++E A +LF+EM    V  D  TY   +DGLC NG + +A+E+F  L
Sbjct: 382 TYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 441

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K  LDI  Y  +I+G+CK G++E A  LF SLP + +  +V+TY +MI GLC  G +
Sbjct: 442 QKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 501

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A+ L   MEE+   PN   + TLI   +R    +   +L+ +MK      DAS + MV
Sbjct: 502 SEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 561

Query: 373 VDLL 376
           +D+L
Sbjct: 562 IDML 565



 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 118/360 (32%), Positives = 203/360 (56%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T N +I+  C+      A ++  ++      PD  T+N+LI+GLC  +  +EA  L 
Sbjct: 99  NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLV 158

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M++ G QP+VVT+N I++ +CK+G    A  LL  M +R+V+ + FTYST++D  C  
Sbjct: 159 ARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRD 218

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G I+ A  LF  ME+ G K   V+YN L+ G CK  +  + + L ++M S+ I P V+T+
Sbjct: 219 GCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITF 278

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L     +  +++ A +L++EM    ++ +T TYN+ +DG C    + EA  +   +  
Sbjct: 279 NVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVR 338

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C  DI  +  LI G CK  R++  ++LFR + +R LVA+ VTY+I++ G C  G+++ 
Sbjct: 339 NNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEI 398

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A +LF +M    V P+V+ +  L+ G     K  K +E+   +++ K+  D  + +++++
Sbjct: 399 AEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIE 458



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 182/341 (53%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
           D A  LF +M      P +V ++    G+     +N       +M   G+  ++ T N++
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           ++  C+  K   A  +L  +++    P+  T++TL++G CL  K++ A  L   M   GC
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
           + + V+YN ++NG CK+ +   AL L R+M  + +K  V TY+T+   L     ++ A+ 
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAIS 226

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           LF+EM+   + +   TYN+ + GLCK G   + V+L + +   K   ++  +N LID   
Sbjct: 227 LFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFV 286

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           K G+L+ A EL++ +  + +  + +TYN ++ G C   ++ +A+++   M  N  +P+++
Sbjct: 287 KEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIV 346

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            F +LI G+ ++ +  + ++L  K+ ++ ++ +    S++V
Sbjct: 347 TFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILV 387



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 122/225 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT+ ++I G CK   VD+   LF ++    +  + VTY+ L+ G C +     A+
Sbjct: 341 CSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAE 400

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+  GV P V+T+ +++D LC NGK+++A  + + + +  +  +   Y+ +++G 
Sbjct: 401 ELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGM 460

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+  A  LF S+   G K + ++Y ++I+G CK   + EA  L R+M   G +P  
Sbjct: 461 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPND 520

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            TYNTL         +  + KL EEM+    +AD S+    ID L
Sbjct: 521 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 138/274 (50%)

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K D+A  L   M++    P+   +S    G   T + N   +    ME  G  H+  + N
Sbjct: 45  KEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLN 104

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           I+IN +C+  +   A S+  +++  G +P   T+NTL  GL    +V  A+ L   M  +
Sbjct: 105 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVEN 164

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
               +  TYN+ ++G+CK+G    A++L R +     + D+  Y+ +ID LC+ G ++ A
Sbjct: 165 GCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAA 224

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           + LF+ +  + + + +VTYN ++ GLC  G+ +    L  DM    + PNVI F  LI  
Sbjct: 225 ISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDV 284

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           FV+  K  +  EL  +M  K + P+    + ++D
Sbjct: 285 FVKEGKLQEANELYKEMITKGISPNTITYNSLMD 318



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 2/192 (1%)

Query: 186 GIKPTVVTYN-TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           GI    V Y   L  G+ +I + + A+ LF+EM R         ++ F  G+        
Sbjct: 25  GISDGRVCYGERLRSGIVDIKE-DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNL 83

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
            ++  + + +     +I   N +I+  C+  +   A  +   + +     D  T+N +I+
Sbjct: 84  VLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIN 143

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           GLC + ++ +A  L   M EN   PNV+ + ++++G  +    S  ++LL KM E+ V  
Sbjct: 144 GLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKA 203

Query: 365 DASIVSMVVDLL 376
           D    S ++D L
Sbjct: 204 DVFTYSTIIDSL 215


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 138/361 (38%), Positives = 218/361 (60%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y T+ID LCK G VD A   F QM  E + P+++ Y SLIHGLC  + W++A+ L
Sbjct: 409 PNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEEL 468

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+D+G+  + + FN I+D  CK G++ E+ +L DLMV+  V+P+  TY+TL+DG CL
Sbjct: 469 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCL 528

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A +L  SM S+G K D V+Y  LINGYC+   +++AL+L++EMVS G+ P ++T
Sbjct: 529 AGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 588

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GLF   +   A +L+  + +     + STYN  + GLCKN    EA+ +F+ L 
Sbjct: 589 YNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 648

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   +L+ + +N +I  L K GR++ A +LF +     LV DV TY++M   L   G ++
Sbjct: 649 LTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLE 708

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +  DLFL MEEN  + +  +  +++   ++    ++    L  + EK    +AS  S ++
Sbjct: 709 ELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLL 768

Query: 374 D 374
           +
Sbjct: 769 E 769



 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 190/352 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY++II  LCK   +DKA  +   M    + PD +TYNS++HG C +    EA   
Sbjct: 234 PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 293

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   GV+P+VVT++ +M+ LCKNG+  EA ++ D M +R + P+  TY TL+ G+  
Sbjct: 294 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT 353

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +     L   M   G + D   +NILI  Y K ++V++A+ ++ +M   G+ P VV 
Sbjct: 354 KGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 413

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y T+   L +   V+ A+  FE+M  + +  +   Y + I GLC      +A EL   + 
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                L+   +N +ID  CK GR+  + +LF  + R  +  D++TYN +I G C  G+MD
Sbjct: 474 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMD 533

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A  L   M    V P+++ + TLI+G+ R+++    + L  +M    V P+
Sbjct: 534 EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 585



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 187/340 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TYN+I+ G C  G   +A     +M+ + + P+VVTY+SL++ LC      EA+++
Sbjct: 269 PDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKI 328

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M  +G++P + T+  ++      G + E   LLDLMV+  ++P+   ++ L+  +  
Sbjct: 329 FDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAK 388

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+++A  +F  M   G   + V Y  +I+  CK+  V++A+  + +M+ +G+ P ++ 
Sbjct: 389 QEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIV 448

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +L  GL    + + A +L  EM    +  +T  +N+ ID  CK G ++E+ +LF  + 
Sbjct: 449 YTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 508

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  + DI  YN LIDG C +G+++ A +L  S+    +  D+VTY  +I+G C   +MD
Sbjct: 509 RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMD 568

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            A  LF +M  + V+PN+I +  ++ G     + +   EL
Sbjct: 569 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 608



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 198/361 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+   +N +I    K+  VD+A  +F +M+   +NP+VV Y ++I  LC +   ++A  
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F +M+D+G+ P+++ +  ++  LC   K D+A  L+  M+ R +  N   +++++D  C
Sbjct: 433 YFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHC 492

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  +E+LF  M  +G K D ++YN LI+G C   +++EA  L   MVS G+KP +V
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 552

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  G   + +++ AL LF+EM    V+ +  TYN  + GL        A EL+ ++
Sbjct: 553 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 612

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +L++  YN ++ GLCK+   + AL +F++L    L  +  T+NIMI  L   G+M
Sbjct: 613 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRM 672

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A DLF     N + P+V  +  +    +      ++ +L   M+E     D+ +++ +
Sbjct: 673 DEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSI 732

Query: 373 V 373
           V
Sbjct: 733 V 733



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 187/366 (51%), Gaps = 4/366 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEAK 71
           + + +T+  ++ GLC +     A  + L+   E    PDV +YN+L+ GLC  N   EA 
Sbjct: 124 RVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEAL 183

Query: 72  RLFFEMMDQ---GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            L   M D    G  P VV++N +++   K G  D+A      M+ R + P+  TYS+++
Sbjct: 184 ELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSII 243

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
              C    +++A E+  +M   G   D ++YN +++GYC + + +EA+   ++M S G++
Sbjct: 244 AALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE 303

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTY++L   L +  +   A K+F+ M +  +  D +TY T + G    G +VE   L
Sbjct: 304 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHAL 363

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +     + D   +N LI    K  +++ A+ +F  + +  L  +VV Y  +I  LC 
Sbjct: 364 LDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCK 423

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G +D A   F  M +  + PN+I++ +LIHG    +K  K  EL+ +M ++ +  +   
Sbjct: 424 SGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIF 483

Query: 369 VSMVVD 374
            + ++D
Sbjct: 484 FNSIID 489



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 169/337 (50%), Gaps = 10/337 (2%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           + P V TY  LI   C A   +        ++ +G +   +TF  ++  LC + +  +A 
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA- 146

Query: 107 RLLDLMVQRDVR----PNAFTYSTLMDGFCLTGKINRAEELFGSM---ESMGCKHDDVSY 159
             +D++++R       P+ F+Y+ L+ G C   +   A EL   M      G   D VSY
Sbjct: 147 --MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           N ++NG+ K  + ++A S Y EM+ +GI P VVTY+++   L +   ++ A+++   M +
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK 264

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
           + V  D  TYN+ + G C +G   EA+   + +     E ++  Y+ L++ LCK+GR   
Sbjct: 265 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 324

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A ++F S+ +R L  D+ TY  ++ G    G + + H L   M  N + P+  +F  LI 
Sbjct: 325 ARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILIC 384

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            + +  K  + + +  KM++  + P+      V+D+L
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVL 421



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 2/239 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            IGV  KP+ +TYNT+IDG C  G +D+A  L   M    + PD+VTY +LI+G C  + 
Sbjct: 509 RIGV--KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR 566

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            ++A  LF EM+  GV P+++T+N+I+  L    +   A  L   + +   +    TY+ 
Sbjct: 567 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNI 626

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ G C     + A  +F ++     + +  ++NI+I    K   ++EA  L+    + G
Sbjct: 627 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANG 686

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           + P V TY+ +   L E   +E    LF  M+ +  +AD+   N+ +  L + G I  A
Sbjct: 687 LVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  279 bits (713), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 143/352 (40%), Positives = 213/352 (60%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V Y+TIIDGLCK+  VD+A  L+ +M    I PDV+TY +LI G C A    EA  
Sbjct: 147 RPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFG 206

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+ + + P++ T+N ++D LCK GK+ E+  LL +M ++ V+P+   YS LMDG+C
Sbjct: 207 LLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYC 266

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G++ +A+++F  M   G   D  SYNI+ING CK K V+EA++L REM+ K + P  V
Sbjct: 267 LVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTV 326

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY++L  GL ++ ++   L L +EM      A+  TYN+ +DGLCKN  + +A+ LF  +
Sbjct: 327 TYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKM 386

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + +   Y  LIDGLCK GRL+    LF+ L  +    DV TY +MI GLC +G  
Sbjct: 387 KERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMF 446

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           D+A  +   ME+N   PN + F  +I   +  ++  K  +LLH+M  K ++P
Sbjct: 447 DEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 188/361 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT + +I+  C  G +  + ++  ++      P+ +  N+L+ GLC   +  ++   
Sbjct: 43  PDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHF 102

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++ QG Q   V++ ++++ LCK G+   A +LL  +  R  RP+   YST++DG C 
Sbjct: 103 HDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCK 162

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              ++ A +L+  M + G   D ++Y  LI G+C   ++ EA  L  EM+ K I P + T
Sbjct: 163 DKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYT 222

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL   L +  +V+ +  L   M +  V  D   Y+  +DG C  G + +A ++F  + 
Sbjct: 223 YNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMV 282

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+ +YN +I+GLCK  R++ A+ L R +  + ++ D VTY+ +I GLC  G++ 
Sbjct: 283 QTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRIT 342

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
              DL  +M       N++ + +L+ G  +     K I L  KMKE+ + P+    + ++
Sbjct: 343 TILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALI 402

Query: 374 D 374
           D
Sbjct: 403 D 403



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 184/347 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  + +  I+  L K        +L  QM+ + I PD+VT + LI+  CH      +  +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G QP+ +  N +M  LC  G++ ++    D +V +  + +  +Y  L++G C 
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A +L  ++E    + D V Y+ +I+G CK+K V+EA  LY EM ++GI P V+T
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G     Q+  A  L  EM   ++  +  TYNT ID LCK G + E+  L   + 
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+  Y+ L+DG C  G ++ A ++F  + +  +  DV +YNI+I+GLC   ++D
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +A +L  +M    + P+ + + +LI G  ++ + + +++L  +M  +
Sbjct: 308 EAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHR 354



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 170/326 (52%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P ++ +  ++  L     +     L  +M  +G+ P +VT +++++  C  G+M  +  +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
           L  +++   +PN    +TLM G CL G++ ++      + + G + D VSY IL+NG CK
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             E   A+ L R +  +  +P VV Y+T+  GL +   V+ A  L+ EM    +  D  T
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           Y T I G C  G ++EA  L   + +     +I  YN LID LCK G+++ +  L   + 
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
           ++ +  DVV Y+I++ G C  G++ KA  +FL M +  V P+V  +  +I+G  +  +  
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVD 374
           + + LL +M  K ++PD    S ++D
Sbjct: 308 EAMNLLREMLHKNMIPDTVTYSSLID 333



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 113/220 (51%)

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           + +  ++    K K     +SL ++M +KGI P +VT + L      + Q+  +  +  +
Sbjct: 11  IEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGK 70

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           + +     +T   NT + GLC  G + +++     +     ++D  +Y  L++GLCK G 
Sbjct: 71  ILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGE 130

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
              A++L R++  R    DVV Y+ +I GLC D  +D+A+DL+ +M    + P+VI + T
Sbjct: 131 TRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTT 190

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           LI GF    +  +   LL++M  K + P+    + ++D L
Sbjct: 191 LICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTL 230


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  279 bits (713), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 141/364 (38%), Positives = 217/364 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +  TY+TIID LC++G +D A +LF +M+ + I   VVTYNSL+ GLC A  WN+   
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ + + P+V+TFNV++D   K GK+ EA+ L   M+ R + PN  TY+TLMDG+C
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  +++ A  +   M    C  D V++  LI GYC  K V++ + ++R +  +G+    V
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L  G  +  +++ A +LF+EM    V  D  TY   +DGLC NG + +A+E+F  L
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K +L I  Y  +I+G+CK G++E A  LF SLP + +  +V+TY +MI GLC  G +
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A+ L   MEE+  APN   + TLI   +R    +   +L+ +MK      DAS + MV
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 584

Query: 373 VDLL 376
           +D+L
Sbjct: 585 IDML 588



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 184/357 (51%), Gaps = 35/357 (9%)

Query: 41  QMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
           Q++   I  ++ T N +I+  C       A  +  ++M  G +P   TFN ++  L   G
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K+ EA  L+D MV+   +P+  TY+++++G C +G  + A +L   ME    K D  +Y+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL------------------- 201
            +I+  C++  ++ A+SL++EM +KGIK +VVTYN+L  GL                   
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292

Query: 202 --------FEI--------HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
                   F +         +++ A +L++EM    ++ +  TYNT +DG C    + EA
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             +   +   KC  DI  +  LI G C   R++  +++FR++ +R LVA+ VTY+I++ G
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
            C  G++  A +LF +M  + V P+V+ +  L+ G     K  K +E+   +++ K+
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 178/341 (52%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
           D A ALF +M      P +V ++     +     +N       ++   G+  ++ T N++
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           ++  C+  K   A  +L  +++    P+  T++TL+ G  L GK++ A  L   M   GC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
           + D V+YN ++NG C++ +   AL L R+M  + +K  V TY+T+   L     ++ A+ 
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           LF+EM+   + +   TYN+ + GLCK G   +   L + +   +   ++  +N L+D   
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           K G+L+ A EL++ +  R +  +++TYN ++ G C   ++ +A+++   M  N  +P+++
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            F +LI G+  + +    +++   + ++ ++ +A   S++V
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 147/294 (50%), Gaps = 4/294 (1%)

Query: 85  SVVTFNVIMDELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           S+   NV   E  ++G    K D+A  L   M++    P+   +S        T + N  
Sbjct: 48  SISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLV 107

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
            +    +E  G  H+  + NI+IN +C+  +   A S+  +++  G +P   T+NTL  G
Sbjct: 108 LDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKG 167

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
           LF   +V  A+ L + M  +    D  TYN+ ++G+C++G    A++L R +     + D
Sbjct: 168 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           +  Y+ +ID LC+ G ++ A+ LF+ +  + + + VVTYN ++ GLC  G+ +    L  
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           DM    + PNVI F  L+  FV+  K  +  EL  +M  + + P+    + ++D
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 118/225 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT+ ++I G C    VD    +F  +    +  + VTY+ L+ G C +     A+
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+  GV P V+T+ +++D LC NGK+++A  + + + +  +      Y+T+++G 
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+  A  LF S+   G K + ++Y ++I+G CK   + EA  L R+M   G  P  
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            TYNTL         +  + KL EEM+    +AD S+    ID L
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 1/177 (0%)

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           G+ +I + + A+ LF+EM R         ++ F   + +       ++  + L +     
Sbjct: 63  GIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 121

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           +I   N +I+  C+  +   A  +   + +     D  T+N +I GL  +G++ +A  L 
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             M EN   P+V+ + ++++G  R    S  ++LL KM+E+ V  D    S ++D L
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  279 bits (713), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 141/364 (38%), Positives = 217/364 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +  TY+TIID LC++G +D A +LF +M+ + I   VVTYNSL+ GLC A  WN+   
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ + + P+V+TFNV++D   K GK+ EA+ L   M+ R + PN  TY+TLMDG+C
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  +++ A  +   M    C  D V++  LI GYC  K V++ + ++R +  +G+    V
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L  G  +  +++ A +LF+EM    V  D  TY   +DGLC NG + +A+E+F  L
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K +L I  Y  +I+G+CK G++E A  LF SLP + +  +V+TY +MI GLC  G +
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A+ L   MEE+  APN   + TLI   +R    +   +L+ +MK      DAS + MV
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 584

Query: 373 VDLL 376
           +D+L
Sbjct: 585 IDML 588



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 186/357 (52%), Gaps = 35/357 (9%)

Query: 41  QMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
           Q++   I  ++ T N +I+  C       A  +  ++M  G +P   TFN +++ LC  G
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEG 172

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K+ +A  L+D MV+   +P+  TY+++++G C +G  + A ++   ME    K D  +Y+
Sbjct: 173 KVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYS 232

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL------------------- 201
            +I+  C++  ++ A+SL++EM +KGIK +VVTYN+L  GL                   
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292

Query: 202 --------FEI--------HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
                   F +         +++ A +L++EM    ++ +  TYNT +DG C    + EA
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             +   +   KC  DI  +  LI G C   R++  +++FR++ +R LVA+ VTY+I++ G
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
            C  G++  A +LF +M  + V P+V+ +  L+ G     K  K +E+   +++ K+
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 180/341 (52%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
           D A ALF +M      P +V ++     +     +N       ++   G+  ++ T N++
Sbjct: 70  DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           ++  C+  K   A  +L  +++    P+  T++TL++G CL GK+++A  L   M   GC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGC 189

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
           + D V+YN ++NG C++ +   A  + R+M  + +K  V TY+T+   L     ++ A+ 
Sbjct: 190 QPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           LF+EM+   + +   TYN+ + GLCK G   +   L + +   +   ++  +N L+D   
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           K G+L+ A EL++ +  R +  +++TYN ++ G C   ++ +A+++   M  N  +P+++
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            F +LI G+  + +    +++   + ++ ++ +A   S++V
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 118/225 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT+ ++I G C    VD    +F  +    +  + VTY+ L+ G C +     A+
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+  GV P V+T+ +++D LC NGK+++A  + + + +  +      Y+T+++G 
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+  A  LF S+   G K + ++Y ++I+G CK   + EA  L R+M   G  P  
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            TYNTL         +  + KL EEM+    +AD S+    ID L
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 144/295 (48%), Gaps = 4/295 (1%)

Query: 84  PSVVTFNVIMDELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
            S+   NV   E  ++G    K D+A  L   M++    P    +S        T + N 
Sbjct: 47  SSITNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNL 106

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
             +    +E  G  H+  + NI+IN +C+  +   A S+  +++  G +P   T+NTL  
Sbjct: 107 VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIN 166

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           GL    +V  A+ L + M  +    D  TYN+ ++G+C++G    A ++ R +     + 
Sbjct: 167 GLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKA 226

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           D+  Y+ +ID LC+ G ++ A+ LF+ +  + + + VVTYN ++ GLC  G+ +    L 
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            DM    + PNVI F  L+  FV+  K  +  EL  +M  + + P+    + ++D
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 1/177 (0%)

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           G+ +I + + A+ LF+EM R         ++ F   + +       ++  + L +     
Sbjct: 63  GIVDIKK-DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 121

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           +I   N +I+  C+  +   A  +   + +     D  T+N +I+GLC +G++ KA  L 
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLV 181

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             M EN   P+++ + ++++G  R    S   ++L KM+E+ V  D    S ++D L
Sbjct: 182 DRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSL 238


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  279 bits (713), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 141/364 (38%), Positives = 217/364 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +  TY+TIID LC++G +D A +LF +M+ + I   VVTYNSL+ GLC A  WN+   
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ + + P+V+TFNV++D   K GK+ EA+ L   M+ R + PN  TY+TLMDG+C
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  +++ A  +   M    C  D V++  LI GYC  K V++ + ++R +  +G+    V
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L  G  +  +++ A +LF+EM    V  D  TY   +DGLC NG + +A+E+F  L
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K +L I  Y  +I+G+CK G++E A  LF SLP + +  +V+TY +MI GLC  G +
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A+ L   MEE+  APN   + TLI   +R    +   +L+ +MK      DAS + MV
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 584

Query: 373 VDLL 376
           +D+L
Sbjct: 585 IDML 588



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 184/357 (51%), Gaps = 35/357 (9%)

Query: 41  QMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
           Q++   I  ++ T N +I+  C       A  +  ++M  G +P   TFN ++  L   G
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K+ EA  L+D MV+   +P+  TY+++++G C +G  + A +L   ME    K D  +Y+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL------------------- 201
            +I+  C++  ++ A+SL++EM +KGIK +VVTYN+L  GL                   
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292

Query: 202 --------FEI--------HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
                   F +         +++ A +L++EM    ++ +  TYNT +DG C    + EA
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             +   +   KC  DI  +  LI G C   R++  +++FR++ +R LVA+ VTY+I++ G
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
            C  G++  A +LF +M  + V P+V+ +  L+ G     K  K +E+   +++ K+
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 178/341 (52%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
           D A ALF +M      P +V ++     +     +N       ++   G+  ++ T N++
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           ++  C+  K   A  +L  +++    P+  T++TL+ G  L GK++ A  L   M   GC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
           + D V+YN ++NG C++ +   AL L R+M  + +K  V TY+T+   L     ++ A+ 
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           LF+EM+   + +   TYN+ + GLCK G   +   L + +   +   ++  +N L+D   
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           K G+L+ A EL++ +  R +  +++TYN ++ G C   ++ +A+++   M  N  +P+++
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            F +LI G+  + +    +++   + ++ ++ +A   S++V
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410



 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 147/295 (49%), Gaps = 4/295 (1%)

Query: 84  PSVVTFNVIMDELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
            S+   NV   E  ++G    K D+A  L   M++    P+   +S        T + N 
Sbjct: 47  SSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNL 106

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
             +    +E  G  H+  + NI+IN +C+  +   A S+  +++  G +P   T+NTL  
Sbjct: 107 VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK 166

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           GLF   +V  A+ L + M  +    D  TYN+ ++G+C++G    A++L R +     + 
Sbjct: 167 GLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 226

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           D+  Y+ +ID LC+ G ++ A+ LF+ +  + + + VVTYN ++ GLC  G+ +    L 
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            DM    + PNVI F  L+  FV+  K  +  EL  +M  + + P+    + ++D
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 118/225 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT+ ++I G C    VD    +F  +    +  + VTY+ L+ G C +     A+
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+  GV P V+T+ +++D LC NGK+++A  + + + +  +      Y+T+++G 
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+  A  LF S+   G K + ++Y ++I+G CK   + EA  L R+M   G  P  
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            TYNTL         +  + KL EEM+    +AD S+    ID L
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 1/177 (0%)

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           G+ +I + + A+ LF+EM R         ++ F   + +       ++  + L +     
Sbjct: 63  GIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 121

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           +I   N +I+  C+  +   A  +   + +     D  T+N +I GL  +G++ +A  L 
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             M EN   P+V+ + ++++G  R    S  ++LL KM+E+ V  D    S ++D L
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  278 bits (712), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 142/364 (39%), Positives = 220/364 (60%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V Y+ +ID LCK+G  D A +LF +M+ + I  DVVTY+SLI GLC+   W++  +
Sbjct: 242 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 301

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM+ + + P VVTF+ ++D   K GK+ EA  L + M+ R + P+  TY++L+DGFC
Sbjct: 302 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               ++ A ++F  M S GC+ D V+Y+ILIN YCK K V++ + L+RE+ SKG+ P  +
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 421

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL LG  +  ++  A +LF+EM    V     TY   +DGLC NG + +A+E+F  +
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +  L I  YN +I G+C + +++ A  LF SL  + +  DVVTYN+MI GLC  G +
Sbjct: 482 QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSL 541

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  LF  M+E+   P+   +  LI   +  +     +EL+ +MK      D+S + MV
Sbjct: 542 SEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMV 601

Query: 373 VDLL 376
           +D+L
Sbjct: 602 IDML 605



 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 123/353 (34%), Positives = 201/353 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTY  +++ LCK G    A  LF +M+  NI   VV Y+ +I  LC    +++A  
Sbjct: 207 QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALS 266

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  +G++  VVT++ ++  LC +GK D+ +++L  M+ R++ P+  T+S L+D F 
Sbjct: 267 LFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFV 326

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A+EL+  M + G   D ++YN LI+G+CK   + EA  ++  MVSKG +P +V
Sbjct: 327 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 386

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L     +  +V+  ++LF E+    +  +T TYNT + G C++G +  A ELF+ +
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   +  Y  L+DGLC +G L  ALE+F  + +  +   +  YNI+IHG+CN  ++
Sbjct: 447 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 506

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           D A  LF  + +  V P+V+ +  +I G  +    S+   L  KMKE    PD
Sbjct: 507 DDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559



 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 205/361 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+T+T++T+++G C EG V +A AL  +M      PD+VT ++LI+GLC     +EA  
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M++ G QP  VT+  +++ LCK+G    A  L   M +R+++ +   YS ++D  C
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  + A  LF  ME  G K D V+Y+ LI G C + + ++   + REM+ + I P VV
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++ L     +  ++  A +L+ EM    +A DT TYN+ IDG CK   + EA ++F  +
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               CE DI  Y+ LI+  CK+ R++  + LFR +  + L+ + +TYN ++ G C  G++
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A +LF +M    V P+V+ +  L+ G     + +K +E+  KM++ ++     I +++
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496

Query: 373 V 373
           +
Sbjct: 497 I 497



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/328 (32%), Positives = 174/328 (53%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           PD +T+++L++G C     +EA  L   M++   +P +VT + +++ LC  G++ EA  L
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
           +D MV+   +P+  TY  +++  C +G    A +LF  ME    K   V Y+I+I+  CK
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
           +   ++ALSL+ EM  KGIK  VVTY++L  GL    + +   K+  EM   ++  D  T
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           ++  ID   K G ++EA EL+  +       D   YN LIDG CK   L  A ++F  + 
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
            +    D+VTY+I+I+  C   ++D    LF ++    + PN I + TL+ GF +  K +
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVDLL 376
              EL  +M  + V P      +++D L
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGL 465



 Score =  157 bits (396), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 169/343 (49%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           V+ A  LF  M      P  + +N L   +     ++        M   G++  + T  +
Sbjct: 51  VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C+  K+  A  +L    +    P+  T+STL++GFCL G+++ A  L   M  M 
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + D V+ + LING C    V EAL L   MV  G +P  VTY  +   L +      AL
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            LF +M+  ++ A    Y+  ID LCK+G   +A+ LF  + +   + D+  Y+ LI GL
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C  G+ +   ++ R +  R ++ DVVT++ +I     +G++ +A +L+ +M    +AP+ 
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           I + +LI GF + N   +  ++   M  K   PD    S++++
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 127/225 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ VTY+ +I+  CK   VD    LF ++  + + P+ +TYN+L+ G C +   N AK
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+ +GV PSVVT+ +++D LC NG++++A  + + M +  +      Y+ ++ G 
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++ A  LF S+   G K D V+YN++I G CK   + EA  L+R+M   G  P  
Sbjct: 501 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            TYN L         +  +++L EEM+    +AD+ST    ID L
Sbjct: 561 FTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 150/317 (47%), Gaps = 8/317 (2%)

Query: 68  NEAKRLFFEMMDQGVQ----PSVVTFNVIMDELCKNG----KMDEASRLLDLMVQRDVRP 119
           N     F +++++G       S+    +   E  +NG    K+++A  L + M+Q    P
Sbjct: 9   NRKASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLP 68

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
               ++ L      T + +        ME  G +HD  +  I+IN YC+ K++  A S+ 
Sbjct: 69  TPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVL 128

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
                 G +P  +T++TL  G     +V  A+ L + M       D  T +T I+GLC  
Sbjct: 129 GRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK 188

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G + EA+ L   +     + D   Y  +++ LCKSG   +AL+LFR +  R + A VV Y
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           +I+I  LC DG  D A  LF +ME   +  +V+ + +LI G     K     ++L +M  
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308

Query: 360 KKVMPDASIVSMVVDLL 376
           + ++PD    S ++D+ 
Sbjct: 309 RNIIPDVVTFSALIDVF 325


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  278 bits (712), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 133/363 (36%), Positives = 222/363 (61%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY T+ID LCK G V+ A + F QM  E ++PD++T+ SLIHGLC   +W + ++L
Sbjct: 328 PNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKL 387

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            FEM+++G+ P+ +  N IMD LCK G++ EA    D ++   V+P+  +Y+ L+DG+CL
Sbjct: 388 SFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCL 447

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ + +L G M S+G + D+V+Y+ L+NGYCKN  V++AL+LYREM SK +KP  +T
Sbjct: 448 DGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAIT 507

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GLF   +V  A + + ++    +    +TYN  + GLC+N ++ EA+ +F+ L 
Sbjct: 508 YNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLR 567

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             + +L+++ +N +I GL K GR+  A  LF ++    LV D + Y +MI     +G ++
Sbjct: 568 SKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLE 627

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           ++ +LFL ME+N    N      ++   +      +    L K+ EK+   +AS   +++
Sbjct: 628 ESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEASTAVLLI 687

Query: 374 DLL 376
            ++
Sbjct: 688 SIV 690



 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 126/374 (33%), Positives = 202/374 (54%), Gaps = 16/374 (4%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C PN ++YN +I+GL KEG VDKA  LF +M G+   P++VTYNS+I GLC A   +
Sbjct: 132 GYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMD 191

Query: 69  EAKRLFFEMMDQ----------------GVQPSVVTFNVIMDELCKNGKMDEASRLLDLM 112
           +A+ +  +M D+                G+QP VVT+++++D  CK G+  EA  + D M
Sbjct: 192 KAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSM 251

Query: 113 VQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
           V+R   P+A+TY TL+ G+   G +    +L   M   G   +D  +NILI  Y KN+ +
Sbjct: 252 VRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETL 311

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           ++A++ + EM  KG  P VVTY T+   L +  +VE A+  F +M  + ++ D  T+ + 
Sbjct: 312 DKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSL 371

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           I GLC  G   +  +L   +       +    N ++D LCK GR+  A + F  +    +
Sbjct: 372 IHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGV 431

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
             DVV+Y I+I G C DG+MD++  L   M    + P+ + +  L++G+ +  +    + 
Sbjct: 432 KPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALA 491

Query: 353 LLHKMKEKKVMPDA 366
           L  +M  K V P+A
Sbjct: 492 LYREMFSKDVKPNA 505



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 187/396 (47%), Gaps = 35/396 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG------------ 60
           +P+ VTY+ +ID  CK G   +A+ +F  M     NPD  TY +L+HG            
Sbjct: 222 QPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHD 281

Query: 61  -------------------LCHANDWNE----AKRLFFEMMDQGVQPSVVTFNVIMDELC 97
                              L  A   NE    A   F EM  +G  P+VVT+  ++D LC
Sbjct: 282 LLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILC 341

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K G++++A      MV   + P+  T+++L+ G C  G+  + E+L   M + G   + +
Sbjct: 342 KAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAI 401

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
             N +++  CK   V EA   + +++  G+KP VV+Y  L  G     +++ ++KL   M
Sbjct: 402 FLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRM 461

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
               +  D  TY+  ++G CKNG + +A+ L+R +     + +   YN ++ GL  +GR+
Sbjct: 462 VSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRV 521

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A E +  +    +   + TYNI++ GLC +  +D+A  +F  +        V  F  +
Sbjct: 522 VAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIM 581

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           I G +++ +      L   +    ++PDA I  +++
Sbjct: 582 IVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMI 617



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 168/355 (47%), Gaps = 32/355 (9%)

Query: 35  AKALFLQMKGENINP---DVVTYNSLIHGLCHAN-------DWNEAKRLFFEMM-DQGVQ 83
           A +LF  M    +N    D  T+  LI   C+         + +   R    MM D G  
Sbjct: 75  AVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYN 134

Query: 84  --PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
             P+V+++N++++ L K G++D+A  L   M+ +   PN  TY++++DG C    +++AE
Sbjct: 135 CPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAE 194

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
            +   M   G                   ++EEA+ L ++M   G++P VVTY+ L    
Sbjct: 195 AVLQQMFDKG-------------------QLEEAVRLLKKMSGGGLQPDVVTYSLLIDYY 235

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
            +I +   A  +F+ M R     D  TY T + G    G +V+  +L   +      L+ 
Sbjct: 236 CKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLED 295

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
             +N LI    K+  L+ A+  F  + ++    +VVTY  +I  LC  G+++ A   F  
Sbjct: 296 HVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQ 355

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           M    ++P++I F +LIHG   I +  KV +L  +M  + + P+A  ++ ++D L
Sbjct: 356 MVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSL 410



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 121/234 (51%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + +  +P+ VTY+ +++G CK G VD A AL+ +M  +++ P+ +TYN ++HGL HA   
Sbjct: 462 VSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRV 521

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A+  + +++D G+Q  + T+N+++  LC+N  +DEA R+   +  ++ +    T++ +
Sbjct: 522 VAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIM 581

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G    G+I  A+ LF ++   G   D + Y ++I  + +   +EE+  L+  M   G 
Sbjct: 582 IVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGC 641

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
                T N +   L E   V  A     ++   + + + ST    I  + +  Y
Sbjct: 642 TANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEASTAVLLISIVSERKY 695



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 123/238 (51%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           I V  KP+ V+Y  +IDG C +G +D++  L  +M    + PD VTY++L++G C     
Sbjct: 427 IHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRV 486

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  L+ EM  + V+P+ +T+N+I+  L   G++  A      +V   ++    TY+ +
Sbjct: 487 DDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIV 546

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G C    ++ A  +F  + S   + +  ++NI+I G  K   + +A SL+  ++  G+
Sbjct: 547 LGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGL 606

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            P  + Y  +     E   +E + +LF  M+++   A++ T N  +  L + G +  A
Sbjct: 607 VPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRA 664


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  278 bits (712), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 145/364 (39%), Positives = 217/364 (59%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+ VTYNTIID LCK+  V+ A     +M    I P+V TYN ++HG C     NEA 
Sbjct: 224 CKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEAT 283

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RLF EM+ + V P  VT  +++D LCK G + EA  + + M ++ V PN  TY+ LMDG+
Sbjct: 284 RLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGY 343

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL   +N A+++F  M   GC     SYNILING+CK++ ++EA SL  EM  K + P  
Sbjct: 344 CLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDT 403

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+TL  GL +  + + AL +F+EM    +  +  TY+  +DG CK+G++ EA++L ++
Sbjct: 404 VTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKS 463

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   K E +I  +  LI+G+  +G+LE+A ELF  L    +   + TY +MI GL  +G 
Sbjct: 464 MQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGL 523

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D+A+DLF  ME++   PN   +  +I GF++    S  I L+ +M  K+   + S   M
Sbjct: 524 SDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQM 583

Query: 372 VVDL 375
           ++DL
Sbjct: 584 LLDL 587



 Score =  228 bits (580), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 122/360 (33%), Positives = 193/360 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   T+N +I+GLC EG + +A  LF +M      P+V++YN++I+GLC   + + A  +
Sbjct: 156 PTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDV 215

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M   G +P VVT+N I+D LCK+  +++A   L  M+ R + PN FTY+ ++ GFC+
Sbjct: 216 FKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCI 275

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++N A  LF  M       D V+  IL++G CK   V EA  ++  M  KG++P + T
Sbjct: 276 LGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNIST 335

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G      +  A K+FE M R   A    +YN  I+G CK+  + EA  L   + 
Sbjct: 336 YNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMY 395

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D   Y+ L+ GLC+ GR + AL +F+ +    L+ ++VTY+I++ G C  G +D
Sbjct: 396 HKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLD 455

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  L   M+E  + PN++    LI G     K     EL  K+    + P     ++++
Sbjct: 456 EALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMI 515



 Score =  224 bits (570), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 194/362 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+   +   +    K+       +L  QM    +  +V + N LI+ LC  N  + A  
Sbjct: 85  RPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVS 144

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M   G+ P+  TFN +++ LC  GK+ EA  L + MV+R   PN  +Y+T+++G C
Sbjct: 145 ILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLC 204

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            TG  + A ++F  ME  GCK D V+YN +I+  CK++ V +A+    EM+ +GI P V 
Sbjct: 205 KTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVF 264

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN +  G   + Q+  A +LF+EM   DV  DT T    +DGLCK G + EA  +F T+
Sbjct: 265 TYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETM 324

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                E +I  YN L+DG C    +  A ++F  + R+     V +YNI+I+G C   +M
Sbjct: 325 TEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRM 384

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A  L  +M   A+ P+ + + TL+ G  +  +P + + +  +M    ++P+    S++
Sbjct: 385 DEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSIL 444

Query: 373 VD 374
           +D
Sbjct: 445 LD 446



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 169/299 (56%), Gaps = 6/299 (2%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G    P+TVT   ++DGLCKEG V +A+ +F  M  + + P++ TYN+L+ G C     
Sbjct: 290 VGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLM 349

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           NEAK++F  M+ QG  P V ++N++++  CK+ +MDEA  LL  M  + + P+  TYSTL
Sbjct: 350 NEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTL 409

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           M G C  G+   A  +F  M S G   + V+Y+IL++G+CK+  ++EAL L + M  K +
Sbjct: 410 MQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKL 469

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P +V +  L  G+F   ++E A +LF ++  D +     TY   I GL K G   EA +
Sbjct: 470 EPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYD 529

Query: 248 LFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           LFR +   G L    +  +YN +I G  ++     A+ L   +  +   A++ T+ +++
Sbjct: 530 LFRKMEDDGFLP---NSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 140/276 (50%)

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           N  +D+A      MV+ + RP+   +   +  F    + +    L   M+  G  H+  S
Sbjct: 66  NISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYS 125

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
            N+LIN  C+   V+ A+S+  +M   GI PT  T+N L  GL    +++ A++LF EM 
Sbjct: 126 LNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMV 185

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
           R     +  +YNT I+GLCK G    AV++F+ +    C+ D+  YN +ID LCK   + 
Sbjct: 186 RRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVN 245

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A+E    +  R +  +V TYN M+HG C  GQ+++A  LF +M    V P+ +    L+
Sbjct: 246 DAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILV 305

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            G  +    S+   +   M EK V P+ S  + ++D
Sbjct: 306 DGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMD 341



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 82/171 (47%)

Query: 206 QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYN 265
            ++ AL  F  M R +     + +  F+    K       V L   + +     ++ + N
Sbjct: 68  SIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 127

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
            LI+ LC+   ++ A+ +   + +  +     T+N +I+GLCN+G++ +A +LF +M   
Sbjct: 128 VLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRR 187

Query: 326 AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              PNVI + T+I+G  +    S  +++  KM++    PD    + ++D L
Sbjct: 188 GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSL 238


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  278 bits (712), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 138/361 (38%), Positives = 218/361 (60%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y T+ID LCK G VD A   F QM  E + P+++ Y SLIHGLC  + W++A+ L
Sbjct: 409 PNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEEL 468

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+D+G+  + + FN I+D  CK G++ E+ +L DLMV+  V+P+  TY+TL+DG CL
Sbjct: 469 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCL 528

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A +L  SM S+G K D V+Y  LINGYC+   +++AL+L++EMVS G+ P ++T
Sbjct: 529 AGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 588

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GLF   +   A +L+  + +     + STYN  + GLCKN    EA+ +F+ L 
Sbjct: 589 YNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 648

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   +L+ + +N +I  L K GR++ A +LF +     LV DV TY++M   L   G ++
Sbjct: 649 LTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLE 708

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +  DLFL MEEN  + +  +  +++   ++    ++    L  + EK    +AS  S ++
Sbjct: 709 ELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLL 768

Query: 374 D 374
           +
Sbjct: 769 E 769



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 190/352 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY++II  LCK   +DKA  +   M    + PD +TYNS++HG C +    EA   
Sbjct: 234 PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 293

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   GV+P+VVT++ +M+ LCKNG+  EA ++ D M +R + P+  TY TL+ G+  
Sbjct: 294 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT 353

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +     L   M   G + D   +NILI  Y K ++V++A+ ++ +M   G+ P VV 
Sbjct: 354 KGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 413

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y T+   L +   V+ A+  FE+M  + +  +   Y + I GLC      +A EL   + 
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                L+   +N +ID  CK GR+  + +LF  + R  +  D++TYN +I G C  G+MD
Sbjct: 474 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMD 533

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A  L   M    V P+++ + TLI+G+ R+++    + L  +M    V P+
Sbjct: 534 EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 585



 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 187/340 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TYN+I+ G C  G   +A     +M+ + + P+VVTY+SL++ LC      EA+++
Sbjct: 269 PDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKI 328

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M  +G++P + T+  ++      G + E   LLDLMV+  ++P+   ++ L+  +  
Sbjct: 329 FDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAK 388

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+++A  +F  M   G   + V Y  +I+  CK+  V++A+  + +M+ +G+ P ++ 
Sbjct: 389 QEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIV 448

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +L  GL    + + A +L  EM    +  +T  +N+ ID  CK G ++E+ +LF  + 
Sbjct: 449 YTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 508

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  + DI  YN LIDG C +G+++ A +L  S+    +  D+VTY  +I+G C   +MD
Sbjct: 509 RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMD 568

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            A  LF +M  + V+PN+I +  ++ G     + +   EL
Sbjct: 569 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 608



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 198/361 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+   +N +I    K+  VD+A  +F +M+   +NP+VV Y ++I  LC +   ++A  
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F +M+D+G+ P+++ +  ++  LC   K D+A  L+  M+ R +  N   +++++D  C
Sbjct: 433 YFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHC 492

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  +E+LF  M  +G K D ++YN LI+G C   +++EA  L   MVS G+KP +V
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 552

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  G   + +++ AL LF+EM    V+ +  TYN  + GL        A EL+ ++
Sbjct: 553 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 612

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +L++  YN ++ GLCK+   + AL +F++L    L  +  T+NIMI  L   G+M
Sbjct: 613 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRM 672

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A DLF     N + P+V  +  +    +      ++ +L   M+E     D+ +++ +
Sbjct: 673 DEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSI 732

Query: 373 V 373
           V
Sbjct: 733 V 733



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 186/364 (51%), Gaps = 4/364 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEAKRL 73
           + +T+  ++ GLC +     A  + L+   E    PDV +YN+L+ GLC  N   EA  L
Sbjct: 126 DAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALEL 185

Query: 74  FFEMMDQ---GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
              M D    G  P VV++N +++   K G  D+A      M+ R + P+  TYS+++  
Sbjct: 186 LHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAA 245

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C    +++A E+  +M   G   D ++YN +++GYC + + +EA+   ++M S G++P 
Sbjct: 246 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPN 305

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY++L   L +  +   A K+F+ M +  +  D +TY T + G    G +VE   L  
Sbjct: 306 VVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLD 365

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +     + D   +N LI    K  +++ A+ +F  + +  L  +VV Y  +I  LC  G
Sbjct: 366 LMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSG 425

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            +D A   F  M +  + PN+I++ +LIHG    +K  K  EL+ +M ++ +  +    +
Sbjct: 426 SVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFN 485

Query: 371 MVVD 374
            ++D
Sbjct: 486 SIID 489



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 169/337 (50%), Gaps = 10/337 (2%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           + P V TY  LI   C A   +        ++ +G +   +TF  ++  LC + +  +A 
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA- 146

Query: 107 RLLDLMVQRDVR----PNAFTYSTLMDGFCLTGKINRAEELFGSM---ESMGCKHDDVSY 159
             +D++++R       P+ F+Y+ L+ G C   +   A EL   M      G   D VSY
Sbjct: 147 --MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           N ++NG+ K  + ++A S Y EM+ +GI P VVTY+++   L +   ++ A+++   M +
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK 264

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
           + V  D  TYN+ + G C +G   EA+   + +     E ++  Y+ L++ LCK+GR   
Sbjct: 265 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 324

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A ++F S+ +R L  D+ TY  ++ G    G + + H L   M  N + P+  +F  LI 
Sbjct: 325 ARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILIC 384

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            + +  K  + + +  KM++  + P+      V+D+L
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVL 421



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 2/239 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            IGV  KP+ +TYNT+IDG C  G +D+A  L   M    + PD+VTY +LI+G C  + 
Sbjct: 509 RIGV--KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR 566

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            ++A  LF EM+  GV P+++T+N+I+  L    +   A  L   + +   +    TY+ 
Sbjct: 567 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNI 626

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ G C     + A  +F ++     + +  ++NI+I    K   ++EA  L+    + G
Sbjct: 627 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANG 686

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           + P V TY+ +   L E   +E    LF  M+ +  +AD+   N+ +  L + G I  A
Sbjct: 687 LVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  278 bits (712), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 143/363 (39%), Positives = 215/363 (59%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY T+ID LCK G VD A   F QM  E + P+ V +NSL++GLC  + W + + L
Sbjct: 538 PNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEEL 597

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM++QG++P +V FN ++  LCK G++ EA RL+D MV   ++P+  +Y+TL+DG C 
Sbjct: 598 FLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCF 657

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +++ A +L   M S G K + VSYN L++GYCK   ++ A  L+REM+ KG+ P V T
Sbjct: 658 ASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVET 717

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+  GLF   +   A +L+  M +        TY+  +DG CKN    EA ++F++L 
Sbjct: 718 YNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLC 777

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  +LDI  +N +IDGL K GR E A++LF ++P   LV  VVTY ++   L  +G ++
Sbjct: 778 SMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLE 837

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +   LF  ME++  APN  +   LI   +   +  +    L K+ EK    +AS  SM++
Sbjct: 838 ELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLI 897

Query: 374 DLL 376
            L 
Sbjct: 898 SLF 900



 Score =  256 bits (655), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 132/365 (36%), Positives = 214/365 (58%), Gaps = 3/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V+YN +I+G   EG VDKA +LFL+M    ++PDVVTYN++I GLC A + + A+
Sbjct: 189 CSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAE 245

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F +M+++GV+P+ VT+N I+D LCK  ++D A  +   MV + V+P+  TY+T++DG 
Sbjct: 246 DVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGL 305

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    ++RAE +F  M   G K D V+YN +I+G CK + +++A  ++++M+ KG+KP  
Sbjct: 306 CKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDN 365

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY  +  GL +   V+ A  +F++M    V  +  TYN  I G    G   E V+  + 
Sbjct: 366 LTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKE 425

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     E D+  Y  L+D LCK+G+   A  LF S+ R+ +   V  Y IM+HG    G 
Sbjct: 426 MSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGA 485

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + + HDL   M  N ++PN  IF T+I  + +     +V+ +  KMK++ + P+      
Sbjct: 486 LSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGT 545

Query: 372 VVDLL 376
           ++D L
Sbjct: 546 LIDAL 550



 Score =  241 bits (616), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 137/394 (34%), Positives = 212/394 (53%), Gaps = 37/394 (9%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+GV   P+ VTYNTIIDGLCK   VD+A+ +F QM  + + P+ VTYN++I GLC A +
Sbjct: 218 EMGV--SPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQE 275

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            + A+ +F +M+D+GV+PS VT+N I+D LCK   +D A  +   M+ R V+P+  TY+T
Sbjct: 276 VDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNT 335

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++DG C    I++AE +F  M   G K D+++Y I+I+G CK + V+ A  ++++M+ KG
Sbjct: 336 IIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKG 395

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +KP   TYN L  G     Q E  ++  +EM   D+  D  TY   +D LCKNG   EA 
Sbjct: 396 VKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEAR 455

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRL----------------------------- 277
            LF ++     +  +  Y  ++ G  K G L                             
Sbjct: 456 SLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAY 515

Query: 278 ------EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
                 +  + +F  + ++ L  +VVTY  +I  LC  G++D A   F  M    V PN 
Sbjct: 516 AKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNN 575

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++F +L++G   ++K  KV EL  +M  + + PD
Sbjct: 576 VVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPD 609



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 203/397 (51%), Gaps = 35/397 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ +TY  IIDGLCK   VD+A+ +F QM  + + P+  TYN LIHG      W E  +
Sbjct: 362 KPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQ 421

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              EM    ++P V T+ +++D LCKNGK +EA  L D M+++ ++P+   Y  ++ G+ 
Sbjct: 422 RIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYG 481

Query: 133 LTGKINRAEEL-----------------------------------FGSMESMGCKHDDV 157
             G ++   +L                                   F  M+  G   + V
Sbjct: 482 KKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVV 541

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y  LI+  CK   V++A+  + +M+++G+ P  V +N+L  GL  + + E   +LF EM
Sbjct: 542 TYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEM 601

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
               +  D   +NT +  LCK G ++EA  L  ++  +  + D+ +YN LIDG C + R+
Sbjct: 602 LNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRM 661

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A++L   +    L  ++V+YN ++HG C  G++D A+ LF +M    V P V  + T+
Sbjct: 662 DEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTI 721

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           ++G  R  + S+  EL   M + + +      S+++D
Sbjct: 722 LNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILD 758



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 194/362 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTYNTIIDGLCK   VD+A+ +F QM    + PD VTYN++I GLC A   ++A+ 
Sbjct: 292 KPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEG 351

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +M+D+GV+P  +T+ +I+D LCK   +D A  +   M+ + V+PN  TY+ L+ G+ 
Sbjct: 352 VFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYL 411

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            TG+     +    M +   + D  +Y +L++  CKN +  EA SL+  M+ KGIKP+V 
Sbjct: 412 STGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVT 471

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y  +  G  +   +     L   M  + ++ +   +NT I    K   I E + +F  +
Sbjct: 472 IYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKM 531

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++  Y  LID LCK GR++ A+  F  +    +  + V +N +++GLC   + 
Sbjct: 532 KQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKW 591

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +K  +LFL+M    + P+++ F T++    +  +  +   L+  M    + PD    + +
Sbjct: 592 EKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTL 651

Query: 373 VD 374
           +D
Sbjct: 652 ID 653



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 195/367 (53%), Gaps = 7/367 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY+ +I   C+ G ++   A F  +       D +  N L+ GLC      EA  +
Sbjct: 82  PDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHV 141

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV---QRDVRPNAFTYSTLMD 129
               M + G +  VV++N ++  LC   + +EA  LL +MV        P+  +Y+ +++
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVIN 201

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GF   G++++A  LF     MG   D V+YN +I+G CK +EV+ A  ++++MV KG+KP
Sbjct: 202 GFFNEGQVDKAYSLF---LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP 258

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             VTYNT+  GL +  +V+ A  +F++M    V     TYNT IDGLCK   +  A  +F
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVF 318

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + +     + D   YN +IDGLCK+  ++ A  +F+ +  + +  D +TY I+I GLC  
Sbjct: 319 QQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKA 378

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
             +D+A  +F  M +  V PN   +  LIHG++   +  +V++ + +M    + PD    
Sbjct: 379 QSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTY 438

Query: 370 SMVVDLL 376
            +++D L
Sbjct: 439 GLLLDYL 445



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 192/399 (48%), Gaps = 35/399 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE--- 69
           +P+  TY  ++D LCK G  ++A++LF  M  + I P V  Y  ++HG       +E   
Sbjct: 432 EPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHD 491

Query: 70  ------------------------AKR--------LFFEMMDQGVQPSVVTFNVIMDELC 97
                                   AKR        +F +M  QG+ P+VVT+  ++D LC
Sbjct: 492 LLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALC 551

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K G++D+A    + M+   V PN   +++L+ G C   K  + EELF  M + G + D V
Sbjct: 552 KLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIV 611

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            +N ++   CK   V EA  L   MV  G+KP V++YNTL  G     +++ A+KL + M
Sbjct: 612 FFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGM 671

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
               +  +  +YNT + G CK G I  A  LFR +        ++ YN +++GL +SGR 
Sbjct: 672 VSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRF 731

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A EL+ ++ +   +  + TY+I++ G C +   D+A  +F  +    +  ++I F  +
Sbjct: 732 SEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIM 791

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           I G  +  +    ++L   +    ++P      ++ + L
Sbjct: 792 IDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENL 830



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 80/233 (34%), Positives = 129/233 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ ++YNT+IDG C    +D+A  L   M    + P++V+YN+L+HG C A   + A  
Sbjct: 642 KPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYC 701

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM+ +GV P V T+N I++ L ++G+  EA  L   M++     +  TYS ++DGFC
Sbjct: 702 LFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFC 761

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                + A ++F S+ SM  + D +++NI+I+G  K    E+A+ L+  + + G+ P+VV
Sbjct: 762 KNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVV 821

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           TY  +   L E   +E    LF  M++   A ++   N  I  L   G I  A
Sbjct: 822 TYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRA 874



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 158/320 (49%), Gaps = 15/320 (4%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR-------PN 120
           ++A +LF E++      SV   N ++  + +  K   +S+L      R +R       P+
Sbjct: 25  HDALKLFDELLLHARPASVRALNQLLSVVSR-AKCSSSSKLAVSRFNRMLRDCSNKVAPD 83

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS-LY 179
             TYS ++  FC  G++      FG +   G + DD+  N L+ G C  K V EA+  L 
Sbjct: 84  CCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLL 143

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM---QRDDVAADTSTYNTFIDGL 236
           R+M   G +  VV+YNTL  GL +  + E A +L   M   Q    + D  +YN  I+G 
Sbjct: 144 RQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGF 203

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
              G + +A  LF  +G+     D+  YN +IDGLCK+  ++ A ++F+ +  + +  + 
Sbjct: 204 FNEGQVDKAYSLFLEMGV---SPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNN 260

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           VTYN +I GLC   ++D A  +F  M +  V P+ + + T+I G  +     +   +  +
Sbjct: 261 VTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQ 320

Query: 357 MKEKKVMPDASIVSMVVDLL 376
           M ++ V PD    + ++D L
Sbjct: 321 MIDRGVKPDHVTYNTIIDGL 340



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 120/244 (49%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           +G +    KPN V+YNT++ G CK G +D A  LF +M  + + P V TYN++++GL  +
Sbjct: 669 DGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRS 728

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
             ++EA+ L+  M+      S+ T+++I+D  CKN   DEA ++   +   D++ +  T+
Sbjct: 729 GRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITF 788

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + ++DG    G+   A +LF ++ + G     V+Y ++     +   +EE   L+  M  
Sbjct: 789 NIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEK 848

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
            G  P     N L   L +  ++  A     ++   + + + ST +  I    +  Y   
Sbjct: 849 SGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQH 908

Query: 245 AVEL 248
           A  L
Sbjct: 909 AKSL 912



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 1/206 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TYNTI++GL + G   +A+ L++ M        + TY+ ++ G C  N ++EA ++
Sbjct: 713 PGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKI 772

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  +    +Q  ++TFN+++D L K G+ ++A  L   +    + P+  TY  + +    
Sbjct: 773 FQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIE 832

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +   + LF  ME  G   +    N LI       E+  A +   ++  K       T
Sbjct: 833 EGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEAST 892

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQR 219
             ++ + LF   + +   K   E  R
Sbjct: 893 -TSMLISLFSREEYQQHAKSLPEKCR 917


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  278 bits (712), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 142/364 (39%), Positives = 220/364 (60%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V Y+ +ID LCK+G  D A +LF +M+ + I  DVVTY+SLI GLC+   W++  +
Sbjct: 271 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 330

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM+ + + P VVTF+ ++D   K GK+ EA  L + M+ R + P+  TY++L+DGFC
Sbjct: 331 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 390

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               ++ A ++F  M S GC+ D V+Y+ILIN YCK K V++ + L+RE+ SKG+ P  +
Sbjct: 391 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 450

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL LG  +  ++  A +LF+EM    V     TY   +DGLC NG + +A+E+F  +
Sbjct: 451 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 510

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +  L I  YN +I G+C + +++ A  LF SL  + +  DVVTYN+MI GLC  G +
Sbjct: 511 QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSL 570

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  LF  M+E+   P+   +  LI   +  +     +EL+ +MK      D+S + MV
Sbjct: 571 SEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMV 630

Query: 373 VDLL 376
           +D+L
Sbjct: 631 IDML 634



 Score =  238 bits (606), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 123/353 (34%), Positives = 201/353 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTY  +++ LCK G    A  LF +M+  NI   VV Y+ +I  LC    +++A  
Sbjct: 236 QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALS 295

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  +G++  VVT++ ++  LC +GK D+ +++L  M+ R++ P+  T+S L+D F 
Sbjct: 296 LFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFV 355

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A+EL+  M + G   D ++YN LI+G+CK   + EA  ++  MVSKG +P +V
Sbjct: 356 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 415

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L     +  +V+  ++LF E+    +  +T TYNT + G C++G +  A ELF+ +
Sbjct: 416 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 475

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   +  Y  L+DGLC +G L  ALE+F  + +  +   +  YNI+IHG+CN  ++
Sbjct: 476 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 535

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           D A  LF  + +  V P+V+ +  +I G  +    S+   L  KMKE    PD
Sbjct: 536 DDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 588



 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 205/361 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+T+T++T+++G C EG V +A AL  +M      PD+VT ++LI+GLC     +EA  
Sbjct: 166 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 225

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M++ G QP  VT+  +++ LCK+G    A  L   M +R+++ +   YS ++D  C
Sbjct: 226 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 285

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  + A  LF  ME  G K D V+Y+ LI G C + + ++   + REM+ + I P VV
Sbjct: 286 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 345

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++ L     +  ++  A +L+ EM    +A DT TYN+ IDG CK   + EA ++F  +
Sbjct: 346 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 405

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               CE DI  Y+ LI+  CK+ R++  + LFR +  + L+ + +TYN ++ G C  G++
Sbjct: 406 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 465

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A +LF +M    V P+V+ +  L+ G     + +K +E+  KM++ ++     I +++
Sbjct: 466 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 525

Query: 373 V 373
           +
Sbjct: 526 I 526



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/328 (32%), Positives = 174/328 (53%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           PD +T+++L++G C     +EA  L   M++   +P +VT + +++ LC  G++ EA  L
Sbjct: 167 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 226

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
           +D MV+   +P+  TY  +++  C +G    A +LF  ME    K   V Y+I+I+  CK
Sbjct: 227 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 286

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
           +   ++ALSL+ EM  KGIK  VVTY++L  GL    + +   K+  EM   ++  D  T
Sbjct: 287 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 346

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           ++  ID   K G ++EA EL+  +       D   YN LIDG CK   L  A ++F  + 
Sbjct: 347 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 406

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
            +    D+VTY+I+I+  C   ++D    LF ++    + PN I + TL+ GF +  K +
Sbjct: 407 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 466

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVDLL 376
              EL  +M  + V P      +++D L
Sbjct: 467 AAKELFQEMVSRGVPPSVVTYGILLDGL 494



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 169/343 (49%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           V+ A  LF  M      P  + +N L   +     ++        M   G++  + T  +
Sbjct: 80  VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 139

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C+  K+  A  +L    +    P+  T+STL++GFCL G+++ A  L   M  M 
Sbjct: 140 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 199

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + D V+ + LING C    V EAL L   MV  G +P  VTY  +   L +      AL
Sbjct: 200 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 259

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            LF +M+  ++ A    Y+  ID LCK+G   +A+ LF  + +   + D+  Y+ LI GL
Sbjct: 260 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 319

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C  G+ +   ++ R +  R ++ DVVT++ +I     +G++ +A +L+ +M    +AP+ 
Sbjct: 320 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 379

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           I + +LI GF + N   +  ++   M  K   PD    S++++
Sbjct: 380 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 422



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 127/225 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ VTY+ +I+  CK   VD    LF ++  + + P+ +TYN+L+ G C +   N AK
Sbjct: 410 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 469

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+ +GV PSVVT+ +++D LC NG++++A  + + M +  +      Y+ ++ G 
Sbjct: 470 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 529

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++ A  LF S+   G K D V+YN++I G CK   + EA  L+R+M   G  P  
Sbjct: 530 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 589

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            TYN L         +  +++L EEM+    +AD+ST    ID L
Sbjct: 590 FTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 634



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 149/311 (47%), Gaps = 8/311 (2%)

Query: 74  FFEMMDQGVQ----PSVVTFNVIMDELCKNG----KMDEASRLLDLMVQRDVRPNAFTYS 125
           F +++++G       S+    +   E  +NG    K+++A  L + M+Q    P    ++
Sbjct: 44  FTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFN 103

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L      T + +        ME  G +HD  +  I+IN YC+ K++  A S+       
Sbjct: 104 RLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKL 163

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G +P  +T++TL  G     +V  A+ L + M       D  T +T I+GLC  G + EA
Sbjct: 164 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 223

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           + L   +     + D   Y  +++ LCKSG   +AL+LFR +  R + A VV Y+I+I  
Sbjct: 224 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 283

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC DG  D A  LF +ME   +  +V+ + +LI G     K     ++L +M  + ++PD
Sbjct: 284 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 343

Query: 366 ASIVSMVVDLL 376
               S ++D+ 
Sbjct: 344 VVTFSALIDVF 354


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  278 bits (712), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 140/364 (38%), Positives = 228/364 (62%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + + V +NTIID LCK   VD A  LF +M+ + I P+VVTY+SLI  LC    W++A +
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+++ + P++VTFN ++D   K GK  EA +L D M++R + P+ FTY++L++GFC
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  ++++A+++F  M S  C  D  +YN LI G+CK+K VE+   L+REM  +G+    V
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  GLF     ++A K+F++M  D V  D  TY+  +DGLC NG + +A+E+F  +
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + +LDI  Y  +I+G+CK+G+++   +LF SL  + +  +VVTYN MI GLC+   +
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A+ L   M+E+   P+   + TLI   +R    +   EL+ +M+  + + DAS + +V
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 541

Query: 373 VDLL 376
            ++L
Sbjct: 542 ANML 545



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/395 (31%), Positives = 201/395 (50%), Gaps = 35/395 (8%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  TYN +I+  C+   +  A AL  +M      P +VT +SL++G CH    ++A  L 
Sbjct: 44  NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M++ G +P  +TF  ++  L  + K  EA  L+D MVQR  +PN  TY  +++G C  
Sbjct: 104 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 163

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G I+ A  L   ME+   + D V +N +I+  CK + V++AL+L++EM +KGI+P VVTY
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223

Query: 195 NTL-------------------------------FLGLFEIHQVE----HALKLFEEMQR 219
           ++L                               F  L +    E     A KL ++M +
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
             +  D  TYN+ I+G C +  + +A ++F  +    C  D+  YN LI G CKS R+E 
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
             ELFR +  R LV D VTY  +I GL +DG  D A  +F  M  + V P+++ +  L+ 
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           G     K  K +E+   M++ ++  D  I + +++
Sbjct: 404 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 438



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 196/396 (49%), Gaps = 35/396 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+T+T+ T+I GL       +A AL  +M      P++VTY  +++GLC   D + A  
Sbjct: 112 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 171

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M    ++  VV FN I+D LCK   +D+A  L   M  + +RPN  TYS+L+   C
Sbjct: 172 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 231

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+ + A +L   M       + V++N LI+ + K  +  EA  L+ +M+ + I P + 
Sbjct: 232 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 291

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  G     +++ A ++FE M   D   D  TYNT I G CK+  + +  ELFR +
Sbjct: 292 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351

Query: 253 ---GIL-----------------KCE---------------LDIQAYNCLIDGLCKSGRL 277
              G++                  C+                DI  Y+ L+DGLC +G+L
Sbjct: 352 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 411

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           E ALE+F  + +  +  D+  Y  MI G+C  G++D   DLF  +    V PNV+ + T+
Sbjct: 412 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 471

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           I G        +   LL KMKE   +PD+   + ++
Sbjct: 472 ISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 163/317 (51%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P +  +N L+  +     ++    L  +M   G+  ++ T+N++++  C+  ++  A  L
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
           L  M++    P+  T S+L++G+C   +I+ A  L   M  MG + D +++  LI+G   
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
           + +  EA++L   MV +G +P +VTY  +  GL +   ++ A  L  +M+   + AD   
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           +NT ID LCK  ++ +A+ LF+ +       ++  Y+ LI  LC  GR   A +L   + 
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
            + +  ++VT+N +I     +G+  +A  L  DM + ++ P++  + +LI+GF   ++  
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307

Query: 349 KVIELLHKMKEKKVMPD 365
           K  ++   M  K   PD
Sbjct: 308 KAKQMFEFMVSKDCFPD 324



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 135/263 (51%)

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           MV+    P+ F ++ L+       K +    L   M+ +G  H+  +YNILIN +C+  +
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           +  AL+L  +M+  G +P++VT ++L  G     ++  A+ L ++M       DT T+ T
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            I GL  +    EAV L   +    C+ ++  Y  +++GLCK G +++A  L   +    
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           + ADVV +N +I  LC    +D A +LF +ME   + PNV+ + +LI       + S   
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240

Query: 352 ELLHKMKEKKVMPDASIVSMVVD 374
           +LL  M EKK+ P+    + ++D
Sbjct: 241 QLLSDMIEKKINPNLVTFNALID 263



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 90/195 (46%)

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           MV     P++  +N L   + ++ + +  + L E+MQR  ++ +  TYN  I+  C+   
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           I  A+ L   +  L  E  I   + L++G C   R+  A+ L   +       D +T+  
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +IHGL    +  +A  L   M +    PN++ +  +++G  +         LL+KM+  K
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 362 VMPDASIVSMVVDLL 376
           +  D  I + ++D L
Sbjct: 181 IEADVVIFNTIIDSL 195


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  278 bits (712), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 140/364 (38%), Positives = 228/364 (62%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + + V +NTIID LCK   VD A  LF +M+ + I P+VVTY+SLI  LC    W++A +
Sbjct: 181 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 240

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+++ + P++VTFN ++D   K GK  EA +L D M++R + P+ FTY++L++GFC
Sbjct: 241 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 300

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  ++++A+++F  M S  C  D  +YN LI G+CK+K VE+   L+REM  +G+    V
Sbjct: 301 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 360

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  GLF     ++A K+F++M  D V  D  TY+  +DGLC NG + +A+E+F  +
Sbjct: 361 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 420

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + +LDI  Y  +I+G+CK+G+++   +LF SL  + +  +VVTYN MI GLC+   +
Sbjct: 421 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 480

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A+ L   M+E+   P+   + TLI   +R    +   EL+ +M+  + + DAS + +V
Sbjct: 481 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 540

Query: 373 VDLL 376
            ++L
Sbjct: 541 ANML 544



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 194/362 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT +++++G C    +  A AL  QM      PD +T+ +LIHGL   N  +EA  
Sbjct: 76  EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+ +G QP++VT+ V+++ LCK G +D A  LL+ M    +  +   ++T++D  C
Sbjct: 136 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 195

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               ++ A  LF  ME+ G + + V+Y+ LI+  C      +A  L  +M+ K I P +V
Sbjct: 196 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 255

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N L     +  +   A KL ++M +  +  D  TYN+ I+G C +  + +A ++F  +
Sbjct: 256 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 315

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D+  YN LI G CKS R+E   ELFR +  R LV D VTY  +I GL +DG  
Sbjct: 316 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 375

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  +F  M  + V P+++ +  L+ G     K  K +E+   M++ ++  D  I + +
Sbjct: 376 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 435

Query: 373 VD 374
           ++
Sbjct: 436 IE 437



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 196/396 (49%), Gaps = 35/396 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+T+T+ T+I GL       +A AL  +M      P++VTY  +++GLC   D + A  
Sbjct: 111 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 170

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M    ++  VV FN I+D LCK   +D+A  L   M  + +RPN  TYS+L+   C
Sbjct: 171 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 230

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+ + A +L   M       + V++N LI+ + K  +  EA  L+ +M+ + I P + 
Sbjct: 231 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 290

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  G     +++ A ++FE M   D   D  TYNT I G CK+  + +  ELFR +
Sbjct: 291 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 350

Query: 253 ---GIL-----------------KCE---------------LDIQAYNCLIDGLCKSGRL 277
              G++                  C+                DI  Y+ L+DGLC +G+L
Sbjct: 351 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 410

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           E ALE+F  + +  +  D+  Y  MI G+C  G++D   DLF  +    V PNV+ + T+
Sbjct: 411 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 470

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           I G        +   LL KMKE   +PD+   + ++
Sbjct: 471 ISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 506



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 154/300 (51%), Gaps = 2/300 (0%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDE--ASRLLDLMVQRDVRPNAFTYS 125
           ++A  LF  M+     PS+  FN ++  + K  K D   +  LL  M++    P+  T S
Sbjct: 24  DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLS 83

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           +L++G+C   +I+ A  L   M  MG + D +++  LI+G   + +  EA++L   MV +
Sbjct: 84  SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 143

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G +P +VTY  +  GL +   ++ A  L  +M+   + AD   +NT ID LCK  ++ +A
Sbjct: 144 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 203

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           + LF+ +       ++  Y+ LI  LC  GR   A +L   +  + +  ++VT+N +I  
Sbjct: 204 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 263

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
              +G+  +A  L  DM + ++ P++  + +LI+GF   ++  K  ++   M  K   PD
Sbjct: 264 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 323



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 100/213 (46%), Gaps = 2/213 (0%)

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH--ALKLFEEMQRDDVA 223
           + K+ ++++A+ L+  MV     P++  +N L   + ++ + +   +L L  +M +    
Sbjct: 17  WGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYE 76

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL 283
               T ++ ++G C    I +AV L   +  +    D   +  LI GL    +   A+ L
Sbjct: 77  PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 136

Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
              + +R    ++VTY ++++GLC  G +D A +L   ME   +  +V+IF T+I    +
Sbjct: 137 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 196

Query: 344 INKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                  + L  +M+ K + P+    S ++  L
Sbjct: 197 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 229


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  278 bits (712), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 139/360 (38%), Positives = 215/360 (59%), Gaps = 2/360 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE+G  C+P+ VTY+T+ID LCK+  V++A  +F  MK + I+P VV+Y SLI GLC  +
Sbjct: 223 GEVG--CQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFS 280

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            W EA  +  EM    + P +VTF++++D  CK G + EA  +L  M +  V PN  TY+
Sbjct: 281 RWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYN 340

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           +LM G+ L  ++  A +LF  M + GCK D  SY+ILINGYC  K ++EA  L+ EM+ +
Sbjct: 341 SLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQ 400

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G+ P  V+Y TL     ++ ++  A +LF++M  +    D  TY+  ++G CK GY+ +A
Sbjct: 401 GLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKA 460

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             LFR +     + ++  Y  LID +CKSG L  A +LF  L    L  DV  Y  +I+G
Sbjct: 461 FRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIING 520

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC +G +D+A + F  MEE+   PN   +  +I GF++    S+ ++L+ +M++K  + D
Sbjct: 521 LCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 195/362 (53%), Gaps = 1/362 (0%)

Query: 14  PNTVTYNTIIDGLCK-EGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           P  + +N ++  + +   + D   +L  QM+   ++P+  T N LI+  C     +    
Sbjct: 88  PCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFS 147

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +++  G+QP+++TF  +++ LCK G+  +A  L D MV R  +P+ +TY+T+++G C
Sbjct: 148 VLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLC 207

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+   A  L   M  +GC+ D V+Y+ LI+  CK++ V EAL ++  M +KGI PTVV
Sbjct: 208 KMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVV 267

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y +L  GL    + + A  +  EM   ++  D  T++  ID  CK G ++EA  + +T+
Sbjct: 268 SYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTM 327

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  E ++  YN L+ G      +  A +LF  +  R    DV +Y+I+I+G C   ++
Sbjct: 328 TEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRI 387

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A  LF +M    + PN + + TLIH F ++ K  +  EL   M     +PD    S++
Sbjct: 388 DEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVL 447

Query: 373 VD 374
           ++
Sbjct: 448 LE 449



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 188/362 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PNT T N +I+  C    VD   ++  ++    + P ++T+ +LI+GLC A ++ +A  
Sbjct: 123 SPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALE 182

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF +M+ +G QP V T+  I++ LCK G+   A+ L+  M +   +P+  TYSTL+D  C
Sbjct: 183 LFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLC 242

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +N A ++F  M++ G     VSY  LI G C     +EA ++  EM S  I P +V
Sbjct: 243 KDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIV 302

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++ L     +   V  A  + + M    V  +  TYN+ + G      +VEA +LF  +
Sbjct: 303 TFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVM 362

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C+ D+ +Y+ LI+G C   R++ A +LF  +  + L  + V+Y  +IH  C  G++
Sbjct: 363 ITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKL 422

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A +LF DM  N   P++  +  L+ GF +     K   L   M+   + P+  + +++
Sbjct: 423 REARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTIL 482

Query: 373 VD 374
           +D
Sbjct: 483 ID 484



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 115/217 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+  +Y+ +I+G C    +D+AK LF +M  + + P+ V+Y +LIH  C      EA+
Sbjct: 367 CKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREAR 426

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF +M   G  P + T++V+++  CK G + +A RL   M    ++PN   Y+ L+D  
Sbjct: 427 ELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSM 486

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +G +N A +LF  +   G + D   Y  +ING CK   ++EAL  +R+M   G  P  
Sbjct: 487 CKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNE 546

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
            +YN +  G  +      A++L  EM+     AD  T
Sbjct: 547 FSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 126/276 (45%), Gaps = 36/276 (13%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE-ELFGSMESMGCKHDDVSYN 160
           +D+A    + M+ R   P    ++ L+       +   A   L   ME  G   +  + N
Sbjct: 71  IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLN 130

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           ILIN +C  + V+   S+  +++  G++PT++T+ TL                       
Sbjct: 131 ILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTL----------------------- 167

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
                       I+GLCK G   +A+ELF  +    C+ D+  Y  +I+GLCK G    A
Sbjct: 168 ------------INGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAA 215

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
             L + +       DVVTY+ +I  LC D  +++A D+F  M+   ++P V+ + +LI G
Sbjct: 216 AGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQG 275

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               ++  +   +L++M    +MPD    S+++D+ 
Sbjct: 276 LCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIF 311


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  278 bits (711), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 141/364 (38%), Positives = 217/364 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +  TY+TIID LC++G +D A +LF +M+ + I   VVTYNSL+ GLC A  WN+   
Sbjct: 215 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 274

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ + + P+V+TFNV++D   K GK+ EA+ L   M+ R + PN  TY+TLMDG+C
Sbjct: 275 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 334

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  +++ A  +   M    C  D V++  LI GYC  K V++ + ++R +  +G+    V
Sbjct: 335 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 394

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L  G  +  +++ A +LF+EM    V  D  TY   +DGLC NG + +A+E+F  L
Sbjct: 395 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 454

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K +L I  Y  +I+G+CK G++E A  LF SLP + +  +V+TY +MI GLC  G +
Sbjct: 455 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 514

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A+ L   MEE+  APN   + TLI   +R    +   +L+ +MK      DAS + MV
Sbjct: 515 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 574

Query: 373 VDLL 376
           +D+L
Sbjct: 575 IDML 578



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 184/357 (51%), Gaps = 35/357 (9%)

Query: 41  QMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
           Q++   I  ++ T N +I+  C       A  +  ++M  G +P   TFN ++  L   G
Sbjct: 103 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 162

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K+ EA  L+D MV+   +P+  TY+++++G C +G  + A +L   ME    K D  +Y+
Sbjct: 163 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 222

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL------------------- 201
            +I+  C++  ++ A+SL++EM +KGIK +VVTYN+L  GL                   
Sbjct: 223 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 282

Query: 202 --------FEI--------HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
                   F +         +++ A +L++EM    ++ +  TYNT +DG C    + EA
Sbjct: 283 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 342

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             +   +   KC  DI  +  LI G C   R++  +++FR++ +R LVA+ VTY+I++ G
Sbjct: 343 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 402

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
            C  G++  A +LF +M  + V P+V+ +  L+ G     K  K +E+   +++ K+
Sbjct: 403 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 459



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 178/341 (52%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
           D A ALF +M      P +V ++     +     +N       ++   G+  ++ T N++
Sbjct: 60  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           ++  C+  K   A  +L  +++    P+  T++TL+ G  L GK++ A  L   M   GC
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
           + D V+YN ++NG C++ +   AL L R+M  + +K  V TY+T+   L     ++ A+ 
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           LF+EM+   + +   TYN+ + GLCK G   +   L + +   +   ++  +N L+D   
Sbjct: 240 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 299

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           K G+L+ A EL++ +  R +  +++TYN ++ G C   ++ +A+++   M  N  +P+++
Sbjct: 300 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 359

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            F +LI G+  + +    +++   + ++ ++ +A   S++V
Sbjct: 360 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 400



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 147/294 (50%), Gaps = 4/294 (1%)

Query: 85  SVVTFNVIMDELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           S+   NV   E  ++G    K D+A  L   M++    P+   +S        T + N  
Sbjct: 38  SISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLV 97

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
            +    +E  G  H+  + NI+IN +C+  +   A S+  +++  G +P   T+NTL  G
Sbjct: 98  LDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKG 157

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
           LF   +V  A+ L + M  +    D  TYN+ ++G+C++G    A++L R +     + D
Sbjct: 158 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 217

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           +  Y+ +ID LC+ G ++ A+ LF+ +  + + + VVTYN ++ GLC  G+ +    L  
Sbjct: 218 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 277

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           DM    + PNVI F  L+  FV+  K  +  EL  +M  + + P+    + ++D
Sbjct: 278 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 331



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 118/225 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT+ ++I G C    VD    +F  +    +  + VTY+ L+ G C +     A+
Sbjct: 354 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 413

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+  GV P V+T+ +++D LC NGK+++A  + + + +  +      Y+T+++G 
Sbjct: 414 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 473

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+  A  LF S+   G K + ++Y ++I+G CK   + EA  L R+M   G  P  
Sbjct: 474 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 533

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            TYNTL         +  + KL EEM+    +AD S+    ID L
Sbjct: 534 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 578



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 1/177 (0%)

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           G+ +I + + A+ LF+EM R         ++ F   + +       ++  + L +     
Sbjct: 53  GIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 111

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           +I   N +I+  C+  +   A  +   + +     D  T+N +I GL  +G++ +A  L 
Sbjct: 112 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 171

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             M EN   P+V+ + ++++G  R    S  ++LL KM+E+ V  D    S ++D L
Sbjct: 172 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 228



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 13/125 (10%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM- 128
           A+ L  EM+ +G+ P+ +T++ ++D  CK  ++DEA+++LDLMV +      +  + LM 
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDSDIRYLLAGLMR 777

Query: 129 ---DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY------CKNKEVEEALSLY 179
               G    G  N  ++L  S  S   +  +   +  + GY      CK  E  E++  +
Sbjct: 778 KKRKGSETEGWENLPDDLSCSTAS---RSSNFRSHFSLEGYARLKKRCKETEAVESVGSF 834

Query: 180 REMVS 184
           +  ++
Sbjct: 835 KRRIA 839



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 81/202 (40%), Gaps = 29/202 (14%)

Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGK---INRAEELFGSMESMGCKHDDVSYNILINGY 166
           DLMV  ++  +A  Y+         G+   +  AEEL   M   G   + ++Y+ LI+G+
Sbjct: 685 DLMVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGF 744

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           CK   ++EA  +   MV+KG   + + Y  L  GL    +     + +E +  D   +  
Sbjct: 745 CKENRLDEANQMLDLMVTKG--DSDIRY--LLAGLMRKKRKGSETEGWENLPDDLSCSTA 800

Query: 227 STYNTFIDGLCKNGYI--------VEAVELFRTLGILKCELD--IQAYNCLIDGLCKSGR 276
           S  + F       GY          EAVE   ++G  K  +     A  C    L  SG 
Sbjct: 801 SRSSNFRSHFSLEGYARLKKRCKETEAVE---SVGSFKRRIAGVATAPPCGASSLVSSG- 856

Query: 277 LEIALELFRSLPRRVLVADVVT 298
                   R L R++   DV T
Sbjct: 857 --------RGLKRKIGCIDVST 870


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  278 bits (711), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 146/364 (40%), Positives = 213/364 (58%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN V Y+TIID LCK+  + +A     +M    I+P+VVTY+S++HG C+    NEA 
Sbjct: 113 CKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEAT 172

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF +M+++ V P  VTFN+++D L K G + EA  + + M+++ V PN  TY+ LMDG+
Sbjct: 173 SLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGY 232

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +++ A++LF  M   GC     SYNILI G+CK+  ++EA  L  EM  K + P  
Sbjct: 233 CSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDT 292

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+TL  G  +  + + A KL EEM+   +  D  TY+  +DGLCK G++ EA EL + 
Sbjct: 293 VTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKA 352

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   K E +I  Y  LI G+C  G+LE A ELF +L  + +  DVVTY +MI GL   G 
Sbjct: 353 MQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGL 412

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            ++A +LF DM  +   PN   +  +I GF+R    S    L+ +M  +    D+S   M
Sbjct: 413 SNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQM 472

Query: 372 VVDL 375
           + DL
Sbjct: 473 LSDL 476



 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 126/364 (34%), Positives = 197/364 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VT++T+++GL  +  +  A  LF +M      PDV+TY+++I+GLC       A +
Sbjct: 44  QPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQ 103

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M ++G +P+VV ++ I+D LCK+  + EA   L  MV R + PN  TYS+++ GFC
Sbjct: 104 LLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFC 163

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+ N A  LF  M       D V++NIL++G  K   + EA  ++  M+ KG++P V 
Sbjct: 164 NLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVN 223

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L  G     Q++ A KLF  M R   A    +YN  I G CK+G I EA  L   +
Sbjct: 224 TYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEM 283

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D   Y+ L+ G C+ GR + A +L   +    L+ D++TY+I++ GLC  G +
Sbjct: 284 SHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHL 343

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A +L   M+E+ + PN+ I+  LI G     K     EL   +  K + PD    +++
Sbjct: 344 DEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVM 403

Query: 373 VDLL 376
           +  L
Sbjct: 404 ISGL 407



 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 118/334 (35%), Positives = 189/334 (56%), Gaps = 2/334 (0%)

Query: 45  ENINPDVVTYNSLIHGLCHAND--WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKM 102
            NI PDV T   LI+  CH+N   ++ A  +   M   G+QP+ VTF+ +++ L    K+
Sbjct: 4   SNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKI 63

Query: 103 DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
            +A +L D MV+    P+  TYST+++G C  G    A +L   ME  GCK + V Y+ +
Sbjct: 64  IDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTI 123

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           I+  CK+K + EA+    EMV++GI P VVTY+++  G   + +   A  LF++M   +V
Sbjct: 124 IDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNV 183

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
             DT T+N  +DGL K G I+EA  +F T+     E ++  YN L+DG C   +++ A +
Sbjct: 184 MPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQK 243

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           LF  + R+     V +YNI+I G C  G++D+A  L  +M   A+ P+ + + TL+ GF 
Sbjct: 244 LFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFC 303

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +  +P    +LL +M+   ++PD    S+V+D L
Sbjct: 304 QDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGL 337


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  277 bits (709), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 142/364 (39%), Positives = 220/364 (60%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V Y+ IIDGLCK G +D A  LF +M+ + I  +++TYN LI G C+A  W++  +
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ + + P+VVTF+V++D   K GK+ EA  L   M+ R + P+  TY++L+DGFC
Sbjct: 320 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +++A ++   M S GC  +  ++NILINGYCK   +++ L L+R+M  +G+    V
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  E+ ++  A +LF+EM    V  +  TY   +DGLC NG   +A+E+F  +
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K ELDI  YN +I G+C + +++ A +LF SLP + +   V TYNIMI GLC  G +
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  LF  MEE+  AP+   +  LI   +     +K ++L+ ++K      DAS + MV
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619

Query: 373 VDLL 376
           +D+L
Sbjct: 620 IDML 623



 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 125/361 (34%), Positives = 214/361 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PNT+T++T+I+GLC EG V +A  L  +M      PD++T N+L++GLC +    EA  
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M++ G QP+ VT+  +++ +CK+G+   A  LL  M +R+++ +A  YS ++DG C
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A  LF  ME  G   + ++YNILI G+C     ++   L R+M+ + I P VV
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++ L     +  ++  A +L +EM    +A DT TY + IDG CK  ++ +A ++   +
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C+ +I+ +N LI+G CK+ R++  LELFR +  R +VAD VTYN +I G C  G++
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A +LF +M    V PN++ +  L+ G     +  K +E+  K+++ K+  D  I +++
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514

Query: 373 V 373
           +
Sbjct: 515 I 515



 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 129/362 (35%), Positives = 201/362 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN VTY  +++ +CK G    A  L  +M+  NI  D V Y+ +I GLC     + A 
Sbjct: 224 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM  +G+  +++T+N+++   C  G+ D+ ++LL  M++R + PN  T+S L+D F
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GK+  AEEL   M   G   D ++Y  LI+G+CK   +++A  +   MVSKG  P +
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+N L  G  + ++++  L+LF +M    V ADT TYNT I G C+ G +  A ELF+ 
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 463

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   K   +I  Y  L+DGLC +G  E ALE+F  + +  +  D+  YNI+IHG+CN  +
Sbjct: 464 MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 523

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D A DLF  +    V P V  +  +I G  +    S+   L  KM+E    PD    ++
Sbjct: 524 VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNI 583

Query: 372 VV 373
           ++
Sbjct: 584 LI 585



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 178/343 (51%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
            D A  LF  M      P V+ ++ L   +     ++    L  +M  +G+  ++ T ++
Sbjct: 69  ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C+  K+  A   +  +++    PN  T+STL++G CL G+++ A EL   M  MG
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            K D ++ N L+NG C + +  EA+ L  +MV  G +P  VTY  +   + +  Q   A+
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           +L  +M+  ++  D   Y+  IDGLCK+G +  A  LF  + +     +I  YN LI G 
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C +GR +   +L R + +R +  +VVT++++I     +G++ +A +L  +M    +AP+ 
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           I + +LI GF + N   K  +++  M  K   P+    +++++
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 119/225 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T+N +I+G CK   +D    LF +M    +  D VTYN+LI G C     N AK
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+ + V P++VT+ +++D LC NG+ ++A  + + + +  +  +   Y+ ++ G 
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++ A +LF S+   G K    +YNI+I G CK   + EA  L+R+M   G  P  
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            TYN L            ++KL EE++R   + D ST    ID L
Sbjct: 579 WTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 139/274 (50%)

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K D+A  L   M+     P    +S L      T + +    L   ME  G  H+  + +
Sbjct: 68  KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           I+IN +C+ +++  A S   +++  G +P  +T++TL  GL    +V  AL+L + M   
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
               D  T NT ++GLC +G   EA+ L   +    C+ +   Y  +++ +CKSG+  +A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           +EL R +  R +  D V Y+I+I GLC  G +D A +LF +ME   +  N+I +  LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           F    +     +LL  M ++K+ P+    S+++D
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 341



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/206 (21%), Positives = 92/206 (44%), Gaps = 35/206 (16%)

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
           + ++A+ L+R+M+     PTV+ ++ LF  + +  Q +  L L ++M+   +A +  T +
Sbjct: 68  KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
             I                               NC     C+  +L +A      + + 
Sbjct: 128 IMI-------------------------------NCF----CRCRKLCLAFSAMGKIIKL 152

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
               + +T++ +I+GLC +G++ +A +L   M E    P++I   TL++G     K ++ 
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212

Query: 351 IELLHKMKEKKVMPDASIVSMVVDLL 376
           + L+ KM E    P+A     V++++
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVM 238


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  277 bits (709), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 143/364 (39%), Positives = 218/364 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V Y+ IIDGLCK+G +D A  LF +M+ +    D++ Y +LI G C+A  W++  +
Sbjct: 244 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK 303

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ + + P VV F+ ++D   K GK+ EA  L   M+QR + P+  TY++L+DGFC
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++++A  +   M S GC  +  ++NILINGYCK   +++ L L+R+M  +G+    V
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  E+ ++E A +LF+EM    V  D  +Y   +DGLC NG   +A+E+F  +
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K ELDI  YN +I G+C + +++ A +LF SLP + +  DV TYNIMI GLC  G +
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  LF  MEE+  +PN   +  LI   +     +K  +L+ ++K      DAS V MV
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMV 603

Query: 373 VDLL 376
           VD+L
Sbjct: 604 VDML 607



 Score =  228 bits (580), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 123/361 (34%), Positives = 195/361 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY  ++  +CK G    A  L  +M+   I  D V Y+ +I GLC     + A  
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN 268

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  +G +  ++ +  ++   C  G+ D+ ++LL  M++R + P+   +S L+D F 
Sbjct: 269 LFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFV 328

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  AEEL   M   G   D V+Y  LI+G+CK  ++++A  +   MVSKG  P + 
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N L  G  + + ++  L+LF +M    V ADT TYNT I G C+ G +  A ELF+ +
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   DI +Y  L+DGLC +G  E ALE+F  + +  +  D+  YNI+IHG+CN  ++
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A DLF  +    V P+V  +  +I G  +    S+   L  KM+E    P+    +++
Sbjct: 509 DDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568

Query: 373 V 373
           +
Sbjct: 569 I 569



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 205/361 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+TVT++T+I+GLC EG V +A  L  +M      P ++T N+L++GLC     ++A  
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M++ G QP+ VT+  ++  +CK+G+   A  LL  M +R ++ +A  YS ++DG C
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A  LF  ME  G K D + Y  LI G+C     ++   L R+M+ + I P VV
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            ++ L     +  ++  A +L +EM +  ++ DT TY + IDG CK   + +A  +   +
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  +I+ +N LI+G CK+  ++  LELFR +  R +VAD VTYN +I G C  G++
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A +LF +M    V P+++ +  L+ G     +P K +E+  K+++ K+  D  I +++
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498

Query: 373 V 373
           +
Sbjct: 499 I 499



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 176/342 (51%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
           D A  LF +M      P ++ ++ L   +     ++    L  +M  +G+  ++ T +++
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           ++  C+  K+  A   +  +++    P+  T+STL++G CL G+++ A EL   M  MG 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
           K   ++ N L+NG C N +V +A+ L   MV  G +P  VTY  +   + +  Q   A++
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           L  +M+   +  D   Y+  IDGLCK+G +  A  LF  + I   + DI  Y  LI G C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
            +GR +   +L R + +R +  DVV ++ +I     +G++ +A +L  +M +  ++P+ +
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            + +LI GF + N+  K   +L  M  K   P+    +++++
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 118/225 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T+N +I+G CK   +D    LF +M    +  D VTYN+LI G C       AK
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+ + V+P +V++ +++D LC NG+ ++A  + + + +  +  +   Y+ ++ G 
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++ A +LF S+   G K D  +YNI+I G CK   + EA  L+R+M   G  P  
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            TYN L            + KL EE++R   + D ST    +D L
Sbjct: 563 CTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 138/274 (50%)

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K D+A  L   M +   RP    +S L      T + +   +L   ME  G  H+  + +
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           I+IN  C+ +++  A S   +++  G +P  VT++TL  GL    +V  AL+L + M   
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
                  T N  ++GLC NG + +AV L   +     + +   Y  ++  +CKSG+  +A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           +EL R +  R +  D V Y+I+I GLC DG +D A +LF +ME      ++II+ TLI G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           F    +     +LL  M ++K+ PD    S ++D
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  277 bits (709), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 142/364 (39%), Positives = 220/364 (60%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V Y+ IIDGLCK G +D A  LF +M+ + I  +++TYN LI G C+A  W++  +
Sbjct: 358 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 417

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ + + P+VVTF+V++D   K GK+ EA  L   M+ R + P+  TY++L+DGFC
Sbjct: 418 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 477

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +++A ++   M S GC  +  ++NILINGYCK   +++ L L+R+M  +G+    V
Sbjct: 478 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 537

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  E+ ++  A +LF+EM    V  +  TY   +DGLC NG   +A+E+F  +
Sbjct: 538 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 597

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K ELDI  YN +I G+C + +++ A +LF SLP + +   V TYNIMI GLC  G +
Sbjct: 598 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 657

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  LF  MEE+  AP+   +  LI   +     +K ++L+ ++K      DAS + MV
Sbjct: 658 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 717

Query: 373 VDLL 376
           +D+L
Sbjct: 718 IDML 721



 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 125/361 (34%), Positives = 214/361 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PNT+T++T+I+GLC EG V +A  L  +M      PD++T N+L++GLC +    EA  
Sbjct: 253 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 312

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M++ G QP+ VT+  +++ +CK+G+   A  LL  M +R+++ +A  YS ++DG C
Sbjct: 313 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 372

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A  LF  ME  G   + ++YNILI G+C     ++   L R+M+ + I P VV
Sbjct: 373 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 432

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++ L     +  ++  A +L +EM    +A DT TY + IDG CK  ++ +A ++   +
Sbjct: 433 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 492

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C+ +I+ +N LI+G CK+ R++  LELFR +  R +VAD VTYN +I G C  G++
Sbjct: 493 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 552

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A +LF +M    V PN++ +  L+ G     +  K +E+  K+++ K+  D  I +++
Sbjct: 553 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 612

Query: 373 V 373
           +
Sbjct: 613 I 613



 Score =  244 bits (624), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 129/362 (35%), Positives = 201/362 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN VTY  +++ +CK G    A  L  +M+  NI  D V Y+ +I GLC     + A 
Sbjct: 322 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 381

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM  +G+  +++T+N+++   C  G+ D+ ++LL  M++R + PN  T+S L+D F
Sbjct: 382 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 441

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GK+  AEEL   M   G   D ++Y  LI+G+CK   +++A  +   MVSKG  P +
Sbjct: 442 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 501

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+N L  G  + ++++  L+LF +M    V ADT TYNT I G C+ G +  A ELF+ 
Sbjct: 502 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 561

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   K   +I  Y  L+DGLC +G  E ALE+F  + +  +  D+  YNI+IHG+CN  +
Sbjct: 562 MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 621

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D A DLF  +    V P V  +  +I G  +    S+   L  KM+E    PD    ++
Sbjct: 622 VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNI 681

Query: 372 VV 373
           ++
Sbjct: 682 LI 683



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 178/343 (51%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
            D A  LF  M      P V+ ++ L   +     ++    L  +M  +G+  ++ T ++
Sbjct: 167 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 226

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C+  K+  A   +  +++    PN  T+STL++G CL G+++ A EL   M  MG
Sbjct: 227 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 286

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            K D ++ N L+NG C + +  EA+ L  +MV  G +P  VTY  +   + +  Q   A+
Sbjct: 287 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 346

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           +L  +M+  ++  D   Y+  IDGLCK+G +  A  LF  + +     +I  YN LI G 
Sbjct: 347 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 406

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C +GR +   +L R + +R +  +VVT++++I     +G++ +A +L  +M    +AP+ 
Sbjct: 407 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 466

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           I + +LI GF + N   K  +++  M  K   P+    +++++
Sbjct: 467 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 509



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 119/225 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T+N +I+G CK   +D    LF +M    +  D VTYN+LI G C     N AK
Sbjct: 497 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 556

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+ + V P++VT+ +++D LC NG+ ++A  + + + +  +  +   Y+ ++ G 
Sbjct: 557 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 616

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++ A +LF S+   G K    +YNI+I G CK   + EA  L+R+M   G  P  
Sbjct: 617 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 676

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            TYN L            ++KL EE++R   + D ST    ID L
Sbjct: 677 WTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 721



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 139/274 (50%)

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K D+A  L   M+     P    +S L      T + +    L   ME  G  H+  + +
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           I+IN +C+ +++  A S   +++  G +P  +T++TL  GL    +V  AL+L + M   
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
               D  T NT ++GLC +G   EA+ L   +    C+ +   Y  +++ +CKSG+  +A
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 345

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           +EL R +  R +  D V Y+I+I GLC  G +D A +LF +ME   +  N+I +  LI G
Sbjct: 346 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 405

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           F    +     +LL  M ++K+ P+    S+++D
Sbjct: 406 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 439



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 109/242 (45%), Gaps = 39/242 (16%)

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GKI R E+    M +      ++SY   +     + + ++A+ L+R+M+     PTV+ +
Sbjct: 134 GKI-RYEDFIARMVA---NDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDF 189

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + LF  + +  Q +  L L ++M+              + G+  N Y         TL I
Sbjct: 190 SRLFSAIAKTKQYDLVLALCKQME--------------LKGIAHNLY---------TLSI 226

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           +         NC     C+  +L +A      + +     + +T++ +I+GLC +G++ +
Sbjct: 227 M--------INCF----CRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSE 274

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A +L   M E    P++I   TL++G     K ++ + L+ KM E    P+A     V++
Sbjct: 275 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 334

Query: 375 LL 376
           ++
Sbjct: 335 VM 336


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  277 bits (708), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 143/349 (40%), Positives = 218/349 (62%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + KP+ V YNTIID +CK   V +A  LF +M  + I+ DVVTYN+LI+G C      
Sbjct: 192 GRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLK 251

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  L  EM+ + + P+V T+N+++D LCK GK+ EA  +L +M++  V+P+  TYSTLM
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM 311

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+ L  ++ +A+ +F +M  MG   D  +Y ILING+CKNK V+EAL+L++EM  K + 
Sbjct: 312 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P +VTY++L  GL +  ++ +   L +EM+     AD  TY++ IDGLCKNG++  A+ L
Sbjct: 372 PGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIAL 431

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +   +   +I  +  L+DGLCK GRL+ A E+F+ L  +    +V TYN+MI+G C 
Sbjct: 432 FNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCK 491

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            G +++A  +   ME+N   PN   F T+I    + ++  K  +LL +M
Sbjct: 492 QGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 117/330 (35%), Positives = 181/330 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVT NT+I GLC +G V KA     ++  +    + V+Y +LI+G+C   D   A + 
Sbjct: 127 PDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKF 186

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++  +  +P VV +N I+D +CK   + EA  L   M  + +  +  TY+TL+ GFC+
Sbjct: 187 LRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCI 246

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A  L   M       +  +YNIL++  CK  +V+EA S+   M+   +KP V+T
Sbjct: 247 VGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+TL  G F +++V+ A  +F  M    V  D  TY   I+G CKN  + EA+ LF+ + 
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  I  Y+ LIDGLCKSGR+    +L   +  R   ADV+TY+ +I GLC +G +D
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLD 426

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           +A  LF  M++  + PN+  F  L+ G  +
Sbjct: 427 RAIALFNKMKDQEIRPNIFTFTILLDGLCK 456



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 192/352 (54%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V+Y T+I+G+CK G    A     ++ G    PDVV YN++I  +C     +EA  LF
Sbjct: 163 NQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLF 222

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM  +G+   VVT+N ++   C  GK+ EA  LL+ MV + + PN +TY+ L+D  C  
Sbjct: 223 SEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKE 282

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK+  A+ +   M     K D ++Y+ L++GY    EV++A  ++  M   G+ P V TY
Sbjct: 283 GKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTY 342

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  G  +   V+ AL LF+EM + ++     TY++ IDGLCK+G I    +L   +  
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRD 402

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D+  Y+ LIDGLCK+G L+ A+ LF  +  + +  ++ T+ I++ GLC  G++  
Sbjct: 403 RGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKD 462

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           A ++F D+       NV  +  +I+G  +     + + +L KM++   +P+A
Sbjct: 463 AQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNA 514



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 190/396 (47%), Gaps = 35/396 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  + +N I+D   K      A +L  +++ + I PD++T N LI+  CH         +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++ +G  P  VT N ++  LC  G++ +A    D ++ +  + N  +Y+TL++G C 
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G    A +    ++    K D V YN +I+  CK + V EA  L+ EM  KGI   VVT
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE--------- 244
           YNTL  G   + +++ A+ L  EM    +  +  TYN  +D LCK G + E         
Sbjct: 237 YNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 245 --------------------------AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                                     A  +F  + ++    D+  Y  LI+G CK+  ++
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            AL LF+ + ++ +V  +VTY+ +I GLC  G++    DL  +M +     +VI + +LI
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLI 416

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            G  +     + I L +KMK++++ P+    ++++D
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLD 452



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 173/343 (50%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           VD A + F +M      P ++ +N ++        ++ A  L   +  +G+QP ++T N+
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C  G++     +L  +++R   P+  T +TL+ G CL G++ +A      + + G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + + VSY  LING CK  +   A+   R++  +  KP VV YNT+   + +   V  A 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            LF EM    ++AD  TYNT I G C  G + EA+ L   + +     ++  YN L+D L
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           CK G+++ A  +   + +  +  DV+TY+ ++ G     ++ KA  +F  M    V P+V
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +  LI+GF +     + + L  +M +K ++P     S ++D
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID 382



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 155/280 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN ++D LCKEG V +AK++   M    + PDV+TY++L+ G     +  +A+ +
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   GV P V T+ ++++  CKN  +DEA  L   M Q+++ P   TYS+L+DG C 
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G+I+   +L   M   G   D ++Y+ LI+G CKN  ++ A++L+ +M  + I+P + T
Sbjct: 387 SGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFT 446

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  GL +  +++ A ++F+++       +  TYN  I+G CK G + EA+ +   + 
Sbjct: 447 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKME 506

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
              C  +   +  +I  L K    + A +L R +  R L+
Sbjct: 507 DNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 120/240 (50%)

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           ++ A   F  M  M      + +N +++ + K K    A+SL   +  KGI+P ++T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L      + Q+     +  ++ +     DT T NT I GLC  G + +A+     L    
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            +L+  +Y  LI+G+CK G    A++  R +  R+   DVV YN +I  +C    + +A+
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            LF +M    ++ +V+ + TLI+GF  + K  + I LL++M  K + P+    +++VD L
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 56/103 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  T+  ++DGLCK G +  A+ +F  +  +  + +V TYN +I+G C      EA  
Sbjct: 441 RPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALT 500

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           +  +M D G  P+  TF  I+  L K  + D+A +LL  M+ R
Sbjct: 501 MLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIAR 543


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  277 bits (708), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 138/365 (37%), Positives = 221/365 (60%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ V Y T+I  LCK+    +A  LF +M  + I+P++VT NSL++ LC+  +W    
Sbjct: 210 CQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVN 269

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+D  + P+ ++   ++D LCK G + +A  ++D+M Q  V P+  TY+ L+DG 
Sbjct: 270 TLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGH 329

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL  +++ A ++F  M   GC  +  SYN LINGYCK + +++A+ L+ EM  + + P  
Sbjct: 330 CLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNT 389

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  GL  + +++ A+ LF EM       D  TY   +D LCKN ++ +A+ L + 
Sbjct: 390 VTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKA 449

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DIQ Y  +IDG+C++G LE A +LF +L  + L  +V TYNIM HGLC  G 
Sbjct: 450 IEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGL 509

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A  LF++M+ENA + +   + T+  GF+R N+ S+ I+LL +M  +    D S  ++
Sbjct: 510 LDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTL 569

Query: 372 VVDLL 376
           +V +L
Sbjct: 570 LVGML 574



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 183/363 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +  I+  + K        +L  +M    I  +V T N LI+  CH N  N A  +
Sbjct: 72  PSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSV 131

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G QP   +F  ++  LC  G++ EA  L D M+    +P+   Y+TL++G C 
Sbjct: 132 LAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG  + A  L  SME   C+ D V Y  LI+  CK+++  +A +L+ EM++KGI P +VT
Sbjct: 192 TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            N+L   L  + + +H   L  EM    +  +  +  T +D LCK G + +A ++   + 
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF 311

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E D+  Y  LIDG C    ++ A+++F  +  +    +V +YN +I+G C   +MD
Sbjct: 312 QSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMD 371

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA  LF +M    + PN + + TLIHG   + +    I L  +M     +PD     +++
Sbjct: 372 KAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILL 431

Query: 374 DLL 376
           D L
Sbjct: 432 DYL 434



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 179/354 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+T ++ T+I GLC EG + +A  LF +M  E   PDVV Y +LI+GLC     + A 
Sbjct: 140 CQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAI 199

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL   M     QP VV +  ++  LCK+ +  +A  L   M+ + + PN  T ++L+   
Sbjct: 200 RLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYAL 259

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+      L   M       + +S   +++  CK   V +A  +   M   G++P V
Sbjct: 260 CNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDV 319

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY  L  G     +++ A+K+F+ M     A +  +YNT I+G CK   + +A+ LF  
Sbjct: 320 VTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEE 379

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   K   +   YN LI GLC  GRL+ A+ LFR +     + D+VTY I++  LC +  
Sbjct: 380 MCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCH 439

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +DKA  L   +E + + P++ I+  +I G  R  +     +L   +  K + P+
Sbjct: 440 LDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPN 493



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 162/306 (52%), Gaps = 1/306 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN ++  T++D LCKEG V +A  +   M    + PDVVTY +LI G C  ++ +EA ++
Sbjct: 282 PNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKV 341

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+ +G  P+V ++N +++  CK  +MD+A  L + M ++ + PN  TY+TL+ G C 
Sbjct: 342 FDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCH 401

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A  LF  M + G   D V+Y IL++  CKN  +++A++L + +    + P +  
Sbjct: 402 VGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQI 461

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  +  G+    ++E A  LF  +    +  +  TYN    GLCK G + EA +LF  + 
Sbjct: 462 YTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMD 521

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG-QM 312
              C  D   YN +  G  ++     A++L   +  R    DV T  +++  L +DG   
Sbjct: 522 ENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQ 581

Query: 313 DKAHDL 318
            +AH L
Sbjct: 582 SEAHKL 587



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 84/229 (36%), Positives = 129/229 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  +YNT+I+G CK   +DKA  LF +M  + + P+ VTYN+LIHGLCH     +A 
Sbjct: 350 CAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAI 409

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+  G  P +VT+ +++D LCKN  +D+A  LL  +   ++ P+   Y+ ++DG 
Sbjct: 410 ALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGM 469

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++  A +LF ++ S G K +  +YNI+ +G CK   ++EA  L+ EM         
Sbjct: 470 CRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADG 529

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            TYNT+  G    ++   A++L EEM     + D ST    +  L  +G
Sbjct: 530 CTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDG 578



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 140/303 (46%)

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
           H N  ++A   F  M+     PS+V F  I+  + K  +      L   M    +  N +
Sbjct: 51  HFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVY 110

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           T + L++ FC   ++N A  +   +  +GC+ D  S+  LI G C   ++ EAL L+ +M
Sbjct: 111 TLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKM 170

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
           + +G +P VV Y TL  GL +      A++L   M++ +   D   Y T I  LCK+   
Sbjct: 171 IWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQ 230

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            +A  LF  +       +I   N L+  LC  G  +    L   +    ++ + ++   +
Sbjct: 231 TQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTV 290

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           +  LC +G + +AHD+   M ++ V P+V+ +  LI G    ++  + +++   M  K  
Sbjct: 291 VDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGC 350

Query: 363 MPD 365
            P+
Sbjct: 351 APN 353



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 131/273 (47%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D+A    + M+     P+   ++ ++       + +    L   M+S G  H+  + N+
Sbjct: 55  LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNV 114

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LIN +C    V  A S+  +++  G +P   ++ TL  GL    Q+  AL LF++M  + 
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEG 174

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              D   Y T I+GLCK G+   A+ L R++    C+ D+  Y  LI  LCK  +   A 
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAF 234

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            LF  +  + +  ++VT N +++ LCN G+    + L  +M ++ + PN I   T++   
Sbjct: 235 NLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDAL 294

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +    ++  +++  M +  V PD    + ++D
Sbjct: 295 CKEGMVAQAHDVVDMMFQSGVEPDVVTYTALID 327



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 94/207 (45%)

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +N   + Y     +++ALS +  M+     P++V +  +   + ++ +    L L  +M 
Sbjct: 42  HNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMD 101

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  +  T N  I+  C    +  A  +   +  L C+ D  ++  LI GLC  G++ 
Sbjct: 102 SFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIG 161

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            AL LF  +       DVV Y  +I+GLC  G    A  L   ME+    P+V+++ TLI
Sbjct: 162 EALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLI 221

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPD 365
           H   +  + ++   L  +M  K + P+
Sbjct: 222 HSLCKDRQQTQAFNLFSEMITKGISPN 248


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  277 bits (708), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 144/364 (39%), Positives = 224/364 (61%), Gaps = 3/364 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N V +NTIID LCK   V+ A  LF +M+ + I P+VVTYNSLI+ LC+   W++A R
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR 314

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+++ + P+VVTFN ++D   K GK+ EA +L + M+QR + P+  TY+ L++GFC
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  +++ A+++F  M S  C  +  +YN LING+CK K VE+ + L+REM  +G+    V
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY T+  G F+    + A  +F++M  + V  D  TY+  + GLC  G +  A+ +F+ L
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + EL+I  YN +I+G+CK+G++  A +LF SL    +  DVVTYN MI GLC+   +
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLL 551

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A DLF  M+E+   PN   + TLI   +R    +   EL+ +M+    + DAS +S+V
Sbjct: 552 QEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLV 611

Query: 373 VDLL 376
            ++L
Sbjct: 612 TNML 615



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 118/334 (35%), Positives = 180/334 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT +++++G C    +  A AL  QM      PD  T+ +LIHGL   N  +EA  
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ +G QP +VT+  +++ LCK G +D A  LL+ M    ++ N   ++T++D  C
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +  A +LF  ME+ G + + V+YN LIN  C      +A  L   M+ K I P VV
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N L    F+  ++  A KL EEM +  +  DT TYN  I+G C +  + EA ++F+ +
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  +IQ YN LI+G CK  R+E  +ELFR + +R LV + VTY  +I G    G  
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           D A  +F  M  N V  +++ +  L+HG     K
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGK 483



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 191/360 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +N ++  + K    +   +L  QM+   I+ D+ TY+  I+  C  +  + A  +
Sbjct: 81  PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +MM  G +P +VT + +++  C + ++ +A  L+D MV+   +P+ FT++TL+ G  L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K + A  L   M   GC+ D V+Y  ++NG CK  +++ AL+L  +M +  IK  VV 
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +NT+   L +   VE A+ LF EM+   +  +  TYN+ I+ LC  G   +A  L   + 
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K   ++  +N LID   K G+L  A +L   + +R +  D +TYN++I+G C   ++D
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  +F  M      PN+  + TLI+GF +  +    +EL  +M ++ ++ +    + ++
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 166/307 (54%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  LF +M+     PS+V FN ++  + K  K +    L + M    +  + +TYS  
Sbjct: 65  DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++ FC   +++ A  +   M  +G + D V+ + L+NGYC +K + +A++L  +MV  G 
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP   T+ TL  GLF  ++   A+ L ++M +     D  TY T ++GLCK G I  A+ 
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +   + + ++  +N +ID LCK   +E+A++LF  +  + +  +VVTYN +I+ LC
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           N G+   A  L  +M E  + PNV+ F  LI  F +  K  +  +L  +M ++ + PD  
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI 364

Query: 368 IVSMVVD 374
             +++++
Sbjct: 365 TYNLLIN 371



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 176/343 (51%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           VD A  LF  M      P +V +N L+  +   N +     L  +M   G+   + T+++
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
            ++  C+  ++  A  +L  M++    P+  T S+L++G+C + +I+ A  L   M  MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            K D  ++  LI+G   + +  EA++L  +MV +G +P +VTY T+  GL +   ++ AL
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            L  +M+   + A+   +NT ID LCK  ++  AV+LF  +       ++  YN LI+ L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C  GR   A  L  ++  + +  +VVT+N +I     +G++ +A  L  +M + ++ P+ 
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           I +  LI+GF   N+  +  ++   M  K  +P+    + +++
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 156/328 (47%), Gaps = 23/328 (7%)

Query: 70  AKRLFFEMMDQGV--QPSVVTF---------------------NVIMDELCKNGKMDEAS 106
           AKRLF     QG+   P+V +F                      ++ + L    K+D+A 
Sbjct: 9   AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAV 68

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
            L   MV+    P+   ++ L+       K      L   M+++G  HD  +Y+I IN +
Sbjct: 69  DLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           C+  ++  AL++  +M+  G +P +VT ++L  G     ++  A+ L ++M       DT
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            T+ T I GL  +    EAV L   +    C+ D+  Y  +++GLCK G +++AL L   
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +    + A+VV +N +I  LC    ++ A DLF +ME   + PNV+ + +LI+      +
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVD 374
            S    LL  M EKK+ P+    + ++D
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALID 336



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 104/206 (50%)

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
           +V++A+ L+ +MV     P++V +N L   + ++++ E  + L E+MQ   ++ D  TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
            FI+  C+   +  A+ +   +  L  E DI   + L++G C S R+  A+ L   +   
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
               D  T+  +IHGL    +  +A  L   M +    P+++ + T+++G  +       
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 351 IELLHKMKEKKVMPDASIVSMVVDLL 376
           + LL+KM+  ++  +  I + ++D L
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSL 268


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  277 bits (708), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 143/349 (40%), Positives = 217/349 (62%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G +   + V YN II+ LCK+  V  A  L+ +M  + I+PDVVT+NSLI G C      
Sbjct: 192 GKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLK 251

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  LF EM+ + + P V TF++++D LCK+G +  A  +L +M+++ V P+  TYS+LM
Sbjct: 252 EAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLM 311

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+CL  ++N+A+ +F +M  +G      SYNI+ING  K K V+EALSL++EM  KGI 
Sbjct: 312 DGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIA 371

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  VTYN+L  GL ++ ++ +A +L +EM  + + AD  TYN+ ID LCKN +I +A+ L
Sbjct: 372 PDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIAL 431

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            + +     +  +  YN LIDGLCK GRL+ A ++F+ L  +    +  TYNIMI+GLC 
Sbjct: 432 VKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCK 491

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           +G  ++A  L   ME N + P+ + + T+I    R ++  K  +LL +M
Sbjct: 492 EGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREM 540



 Score =  224 bits (570), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 126/360 (35%), Positives = 200/360 (55%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V+Y T+I+GLCK G    A  +  +++G+ +N DVV YN +I+ LC     ++A +L+ E
Sbjct: 165 VSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSE 224

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+ + + P VVTFN ++   C  G++ EA  L   MV +++ P+ +T+S L+D  C  G 
Sbjct: 225 MITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGN 284

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           I RA+ +   M   G   D V+Y+ L++GYC   EV +A  ++  M   G+ P   +YN 
Sbjct: 285 ITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNI 344

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  GL +I  V+ AL LF+EM    +A DT TYN+ IDGLCK G I  A +L   +    
Sbjct: 345 MINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNG 404

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              DI  YN LID LCK+  ++ A+ L + +  + +   + TYNI+I GLC  G++  A 
Sbjct: 405 IPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQ 464

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           D+F D+     + N   +  +I+G  +    ++   LL KM+   ++PDA     ++  L
Sbjct: 465 DVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRAL 524



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 192/365 (52%), Gaps = 2/365 (0%)

Query: 14  PNTVTYNTIIDGLCK--EGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           P+ V +N I+  + K        A +L  Q++ + I P +VT+N L++  CH  +   A 
Sbjct: 55  PSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAF 114

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F +++  G  P+ +TFN +++ +C NGK+ EA    D ++      +  +Y TL++G 
Sbjct: 115 SIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGL 174

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+   A ++   +E      D V YNI+IN  CK+K V +A  LY EM++K I P V
Sbjct: 175 CKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDV 234

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+N+L LG   + Q++ A  LF EM   ++  D  T++  +D LCK+G I  A  +   
Sbjct: 235 VTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAV 294

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D+  Y+ L+DG C    +  A  +F ++ R  +     +YNIMI+GL     
Sbjct: 295 MMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKM 354

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A  LF +M    +AP+ + + +LI G  ++ + S   +L+ +M    +  D    + 
Sbjct: 355 VDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNS 414

Query: 372 VVDLL 376
           ++D+L
Sbjct: 415 LIDVL 419



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 181/330 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P T+T+NT+I+G+C  G + +A      +     + D V+Y +LI+GLC   +   A ++
Sbjct: 127 PTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQM 186

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++  + V   VV +N+I++ LCK+  + +A +L   M+ + + P+  T+++L+ GFC+
Sbjct: 187 LKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCV 246

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A  LF  M       D  +++IL++  CK+  +  A ++   M+ +G+ P VVT
Sbjct: 247 VGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVT 306

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y++L  G   +++V  A  +F  M R  VA    +YN  I+GL K   + EA+ LF+ + 
Sbjct: 307 YSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMC 366

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D   YN LIDGLCK GR+  A +L   +    + AD++TYN +I  LC +  +D
Sbjct: 367 CKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHID 426

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           KA  L   +++  + P++  +  LI G  +
Sbjct: 427 KAIALVKKIKDQGIQPSMYTYNILIDGLCK 456



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 159/311 (51%), Gaps = 2/311 (0%)

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK--NGKMDEASRLLDLMVQRDVRPNAFT 123
           D N     F  M+     PS+V FN I+  + K  N     A  L   +  + + P   T
Sbjct: 37  DVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVT 96

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           ++ L++ +C  G++  A  +F  +  +G     +++N LING C N +++EAL  +  ++
Sbjct: 97  FNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVI 156

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
           + G     V+Y TL  GL +I +   AL++ ++++   V  D   YN  I+ LCK+  + 
Sbjct: 157 ALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVS 216

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           +A +L+  +   +   D+  +N LI G C  G+L+ A  LF  +  + +  DV T++I++
Sbjct: 217 DAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILV 276

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
             LC DG + +A ++   M +  V P+V+ + +L+ G+  +N+ +K   +   M    V 
Sbjct: 277 DALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVA 336

Query: 364 PDASIVSMVVD 374
           P A   +++++
Sbjct: 337 PHAHSYNIMIN 347



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 115/201 (57%), Gaps = 14/201 (6%)

Query: 1   MANGNGEIGVV-----------CK---PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN 46
           M NG G+I +V           CK   P+TVTYN++IDGLCK G +  A  L  +M    
Sbjct: 345 MINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNG 404

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           I  D++TYNSLI  LC  +  ++A  L  ++ DQG+QPS+ T+N+++D LCK G++  A 
Sbjct: 405 IPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQ 464

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
            +   ++ +    NA+TY+ +++G C  G  N AE L   ME+ G   D V+Y  +I   
Sbjct: 465 DVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRAL 524

Query: 167 CKNKEVEEALSLYREMVSKGI 187
            +  E E+A  L REM+ +G+
Sbjct: 525 FRKDENEKAEKLLREMIIRGL 545


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  276 bits (707), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 142/364 (39%), Positives = 217/364 (59%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN V YNTIID LCK+  V +A   F +M  E I PDV TY+S++HG C+    NEA 
Sbjct: 76  CKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEAT 135

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF +M+++ V P+ VTF +++D LCK   + EA  + + M ++ + P+ +TY+ L+DG+
Sbjct: 136 SLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGY 195

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +++ A++LF  M+  GC  +  SYNILING+CK+  ++EA  L  EM  K + P +
Sbjct: 196 CSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDI 255

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY+TL  G  ++ + + A +L +EM    +  +  TY+  +DGLCK+G++ EA EL + 
Sbjct: 256 FTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKA 315

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   K E +I  Y  LI+G+C  G+LE A ELF +L  + +   VVTY +MI GL   G 
Sbjct: 316 MQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGL 375

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            ++A +LF +M  N   PN   +  +I GF+R       + L+ +M  K    D+S   M
Sbjct: 376 SNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRM 435

Query: 372 VVDL 375
           + DL
Sbjct: 436 LSDL 439



 Score =  241 bits (614), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 126/364 (34%), Positives = 201/364 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VT+NT++ GLC +  +  A  LF +M      PDV+TY+++I+GLC   +   A +
Sbjct: 7   QPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQ 66

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M ++G +P+VV +N I+D LCK+  + EA      MV+  + P+ FTYS+++ GFC
Sbjct: 67  LLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFC 126

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++N A  LF  M       + V++ ILI+G CK + + EA  ++  M  KG++P V 
Sbjct: 127 NLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVY 186

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L  G     Q++ A KLF  M R   A +  +YN  I+G CK+G I EA  L   +
Sbjct: 187 TYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEM 246

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  DI  Y+ L+ G C+ GR + A EL + +    L+ +++TY+I++ GLC  G +
Sbjct: 247 SHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHL 306

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A +L   M+E+ + PN+ I+  LI G     K     EL   +  K + P     +++
Sbjct: 307 DEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVM 366

Query: 373 VDLL 376
           +  L
Sbjct: 367 ISGL 370



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 107/300 (35%), Positives = 174/300 (58%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M   G+QP++VTFN ++  LC   K+ +A +L D MV+    P+  TYST+++G C  G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
              A +L   ME  GCK + V+YN +I+  CK++ V EA+  + EMV +GI P V TY++
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  G   + +V  A  LF++M   +V  +  T+   IDGLCK   I EA  +F T+    
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            E D+  YN L+DG C   +++ A +LF  + R+    +V +YNI+I+G C  G++D+A 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            L  +M   ++ P++  + TL+ GF ++ +P +  ELL +M    ++P+    S+V+D L
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  276 bits (706), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 143/351 (40%), Positives = 206/351 (58%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V YNTIIDGLCK+  V++A  L+ +M    I PD +TY +LI+G C       A  
Sbjct: 147 RPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFS 206

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+ + + P V  +N++++ LCK G + EA  LL +M +  ++P   TYSTLMDG+C
Sbjct: 207 LLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYC 266

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G++  A+++F +M  MG   +  SYNI+ING CK K V+EA++L REM+ K + P  V
Sbjct: 267 LVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTV 326

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  GL +  ++  AL L  EM      AD  TY + +D LCKN  + +A  LF  +
Sbjct: 327 TYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM 386

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +  +  Y  LIDGLCK GRL+ A ELF+ L  +    DV TY +MI GLC +G  
Sbjct: 387 KERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMF 446

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           D+A  +   ME+N   PN + F  +I      ++  K  +LLH+M  K ++
Sbjct: 447 DEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497



 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 187/362 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + N VT N +I+  C  G +  + ++  ++      PD +T N+L+ GLC   +  ++  
Sbjct: 42  RANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLH 101

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +++ QG Q   V++  +++ LCK G+   A +LL ++  R  RPN   Y+T++DG C
Sbjct: 102 FHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLC 161

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +N A +L+  M++ G   D ++Y  LI G+C   ++  A SL  EM+ K I P V 
Sbjct: 162 KDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVY 221

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN L   L +   V+ A  L   M ++ +     TY+T +DG C  G +  A ++F  +
Sbjct: 222 IYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAM 281

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +    ++ +YN +I+GLCK  R++ A+ L R +  + +V D VTYN +I GLC  G++
Sbjct: 282 VQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRI 341

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A +L  +M       +V+ + +L+    +     K   L  KMKE+ + P     + +
Sbjct: 342 TSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTAL 401

Query: 373 VD 374
           +D
Sbjct: 402 ID 403



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 186/363 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  + +N I+  L K      A +L  QM+ + I  + VT N LI+  CH      +  +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G QP  +T N +M  LC  G++ ++    D +V +  + +  +Y TL++G C 
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A +L   +E    + + V YN +I+G CK+K V EA  LY EM ++GI P  +T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G   + Q+  A  L +EM   ++      YN  I+ LCK G + EA  L   + 
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +  +  Y+ L+DG C  G ++ A ++F ++ +  +  +V +YNIMI+GLC   ++D
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A +L  +M    + P+ + + +LI G  +  + +  + L+++M  +    D    + ++
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 367

Query: 374 DLL 376
           D L
Sbjct: 368 DAL 370



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 4/104 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +  TY  +I GLCKEG  D+A A+  +M+     P+ VT+  +I  L   ++ ++A+
Sbjct: 426 CCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAE 485

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           +L  EM+ +G+   V+ F V  D   +N + D+A +LL  M+ +
Sbjct: 486 KLLHEMIAKGLL--VLDFKV-ADVFVQN-ENDKAEKLLHEMIAK 525


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  276 bits (706), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 139/365 (38%), Positives = 213/365 (58%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN VTYNTIID LCK+  V+ A     +M G  I PD +TYNS++HGLC     NEA 
Sbjct: 229 CKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEAT 288

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RLF  M   G +P VVT+N+I+D L K+  +++A+  L  MV + + P+  TY+T++ G 
Sbjct: 289 RLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGL 348

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++N A  LF  ME  GCK D V+YN +I+  CK++ V +A+    EMV +GI P  
Sbjct: 349 CYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNA 408

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+T+  G   + Q++ A +LF+EM   +V  +T T++  +DGLC+ G + EA  +F T
Sbjct: 409 VTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFET 468

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     E +I  YN L++G C   ++  A ++F  +  +    D+ +YNI+I+G CN  +
Sbjct: 469 MTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRR 528

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           MDKA  L   M    + PN + + T++ G   + +     EL  KM    ++P     S+
Sbjct: 529 MDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSI 588

Query: 372 VVDLL 376
           +++ L
Sbjct: 589 LLNGL 593



 Score =  246 bits (629), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 123/308 (39%), Positives = 193/308 (62%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+ V YNTIID LCK+  V+ A     +M    I P+ VTY++++HG C+    +EA 
Sbjct: 369 CKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEAT 428

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +LF EM+ + V P+ +TF++++D LC+ G + EA  + + M ++ V PN +TY+ LM+G+
Sbjct: 429 QLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGY 488

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL  K+N A ++F  M   GC  D  SYNILINGYC ++ +++A +L  +M  K + P  
Sbjct: 489 CLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNT 548

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNT+  GL  + ++  A +LF++M    +     TY+  ++GLCK+G++ EA++LF++
Sbjct: 549 VTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKS 608

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   K E DI  Y  LI+G+   G+LE+A  LF  L    +     TYN+MI GL  +G 
Sbjct: 609 MKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGL 668

Query: 312 MDKAHDLF 319
            D+A++LF
Sbjct: 669 SDEAYELF 676



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 128/362 (35%), Positives = 203/362 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+ VTYN IID L K+  V+ A     +M  + I PDVVTY +++HGLC+    NEA 
Sbjct: 299 CKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAI 358

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RLF +M  +G +P VV +N I+D LCK+  +++A   L  MV R + PNA TYST++ GF
Sbjct: 359 RLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGF 418

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A +LF  M       + ++++IL++G C+   V EA  ++  M  KG++P +
Sbjct: 419 CNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNI 478

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN L  G     ++  A K+FE M     A D  +YN  I+G C +  + +A  L   
Sbjct: 479 YTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQ 538

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + + K   +   YN ++ GLC  GRL  A ELF+ +    ++  ++TY+I+++GLC  G 
Sbjct: 539 MSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGH 598

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A  LF  M+E  + P++I++  LI G     K      L  K+    + P     ++
Sbjct: 599 LDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNV 658

Query: 372 VV 373
           ++
Sbjct: 659 MI 660



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 115/348 (33%), Positives = 185/348 (53%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           + N +I+ LC+   VD A +++ +M    I PDV+T+ +LI+G+C+      A  L+ EM
Sbjct: 130 SLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEM 189

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +  G +P V+++N +++ LC +G  + A  +   M Q   +PN  TY+T++D  C    +
Sbjct: 190 VRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLV 249

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           N A +    M   G   D ++YN +++G C   ++ EA  L++ M   G KP VVTYN +
Sbjct: 250 NDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNII 309

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
              L++   V  A     EM    +  D  TY T + GLC  G + EA+ LF+ +    C
Sbjct: 310 IDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGC 369

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           + D+ AYN +ID LCK   +  A+E    +  R +  + VTY+ ++HG CN GQ+D+A  
Sbjct: 370 KPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQ 429

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LF +M    V PN + F  L+ G  +    S+   +   M EK V P+
Sbjct: 430 LFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPN 477



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 193/364 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V +   +  + K         L  QM    +   V + N LI+ LC  N  + A  
Sbjct: 90  RPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVS 149

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++ +M   G+QP V+TF  +++ +C  GK+  A  L + MV+    P+  +Y+TL++G C
Sbjct: 150 VWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLC 209

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G  N A  +F  ME  GCK + V+YN +I+  CK++ V +A+    EMV +GI P  +
Sbjct: 210 NSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAI 269

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN++  GL  + Q+  A +LF+ M+++    D  TYN  ID L K+  + +A +    +
Sbjct: 270 TYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEM 329

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D+  Y  ++ GLC  G+L  A+ LF+ + ++    DVV YN +I  LC D  +
Sbjct: 330 VDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLV 389

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A +   +M +  + PN + + T++HGF  + +  +  +L  +M  + VMP+    S++
Sbjct: 390 NDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSIL 449

Query: 373 VDLL 376
           VD L
Sbjct: 450 VDGL 453



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 91/249 (36%), Positives = 151/249 (60%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G    PNT+T++ ++DGLC+EG V +A+ +F  M  + + P++ TYN+L++G C     
Sbjct: 435 VGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKM 494

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           NEA+++F  M+ +G  P + ++N++++  C + +MD+A  LL  M  + + PN  TY+T+
Sbjct: 495 NEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTI 554

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           M G C  G++  A+ELF  M S G     ++Y+IL+NG CK+  ++EAL L++ M  K +
Sbjct: 555 MKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKL 614

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P ++ Y  L  G+F   ++E A  LF ++  D +     TYN  I GL K G   EA E
Sbjct: 615 EPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYE 674

Query: 248 LFRTLGILK 256
           LFR   ++K
Sbjct: 675 LFRKWKMMK 683



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 158/272 (58%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY+TI+ G C  G +D+A  LF +M G N+ P+ +T++ L+ GLC     +EA+ +
Sbjct: 406 PNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWV 465

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M ++GV+P++ T+N +M+  C   KM+EA ++ ++MV +   P+  +Y+ L++G+C 
Sbjct: 466 FETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCN 525

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           + ++++A+ L   M       + V+YN ++ G C    + +A  L+++M S G+ PT++T
Sbjct: 526 SRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMT 585

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  GL +   ++ ALKLF+ M+   +  D   Y   I+G+   G +  A  LF  L 
Sbjct: 586 YSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLS 645

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
               +   + YN +I GL K G  + A ELFR
Sbjct: 646 ADGIQPPGRTYNVMIKGLLKEGLSDEAYELFR 677



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 163/312 (52%), Gaps = 6/312 (1%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD---VRPNAFTY 124
           ++A   F+ M     +PS+V F   +  +    KM + S ++ L  Q D   V    ++ 
Sbjct: 75  DDALASFYRMARMNPRPSIVEFGKFLGSI---AKMKQYSTVVYLCNQMDLFGVTHTVYSL 131

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + L++  C    ++ A  ++G M  +G + D +++  LING C   +++ A+ LY EMV 
Sbjct: 132 NILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVR 191

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
            G +P V++YNTL  GL        A+ +F++M+++    +  TYNT ID LCK+  + +
Sbjct: 192 SGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVND 251

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A++    +       D   YN ++ GLC  G+L  A  LF+ + +     DVVTYNI+I 
Sbjct: 252 AMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIID 311

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            L  D  ++ A D   +M +  + P+V+ + T++HG   + + ++ I L  KM++K   P
Sbjct: 312 SLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKP 371

Query: 365 DASIVSMVVDLL 376
           D    + ++D L
Sbjct: 372 DVVAYNTIIDSL 383



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 121/243 (49%)

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           T  ++ A   F  M  M  +   V +   +    K K+    + L  +M   G+  TV +
Sbjct: 71  TISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYS 130

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            N L   L  ++ V+ A+ ++ +M +  +  D  T+ T I+G+C  G I  AVEL+  + 
Sbjct: 131 LNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMV 190

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E D+ +YN LI+GLC SG   +A+ +F+ + +     +VVTYN +I  LC D  ++
Sbjct: 191 RSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVN 250

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A D   +M    + P+ I + +++HG   + + ++   L  +M++    PD    ++++
Sbjct: 251 DAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIII 310

Query: 374 DLL 376
           D L
Sbjct: 311 DSL 313


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  276 bits (705), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 142/351 (40%), Positives = 210/351 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V YNTIIDGLCK+  V++A   + +M    I PDV+TY++LI G C A     A  
Sbjct: 269 RPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFS 328

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  + + P V T+ +++D LCK GK+ EA  LL +M +  V+PN  TYSTLMDG+C
Sbjct: 329 LLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYC 388

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G+++ A+++F +M          SYNI+ING CK K V+EA++L REM+ K + P  V
Sbjct: 389 LVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTV 448

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  GL +  ++  AL L +E+      AD  TY + +DGLCKN  + +A+ LF  +
Sbjct: 449 TYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKM 508

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + +   Y  LIDGLCK  RL+ A +LF+ +  +    DV TYN+MI GLC +G +
Sbjct: 509 KERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGML 568

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           D+A  +   ME+N   P+ + F  +I      ++  K  +LLH+M  K ++
Sbjct: 569 DEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 188/370 (50%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           NG + +   P+ + +  I+  L K      A +L  QM+ + I PD+VT + LI+  CH 
Sbjct: 121 NGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHL 180

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
                +  +  +++  G QP+ +    +M  LC  G++ ++    D +V +  + N  +Y
Sbjct: 181 GQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSY 240

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
            TL++G C  G+   A +L   +E    + D V YN +I+G CK+K V EA   Y EM S
Sbjct: 241 GTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNS 300

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           +GI P V+TY+TL  G     Q+  A  L  EM   ++  D  TY   ID LCK G + E
Sbjct: 301 RGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKE 360

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A  L   +     + ++  Y+ L+DG C  G +  A ++F ++ +  +   V +YNIMI+
Sbjct: 361 AKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMIN 420

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           GLC    +D+A +L  +M    V PN + + +LI G  +  + +  ++L+ ++  +    
Sbjct: 421 GLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPA 480

Query: 365 DASIVSMVVD 374
           D    + ++D
Sbjct: 481 DVITYTSLLD 490



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 158/354 (44%), Gaps = 26/354 (7%)

Query: 44  GENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMD 103
            + I P++VT + LI+ L H      +  +  +++  G QP+ +T   +M      G+  
Sbjct: 4   AKGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLM-----KGETR 58

Query: 104 EASRLLDLMVQRDVRPNAFTYSTLMDGF---------------------CLTGKINRAEE 142
            A +L  ++  R  RP  +  S+L                          +   ++ A  
Sbjct: 59  CAIKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVS 118

Query: 143 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 202
            F  M  M      + +  ++    K K    A+SL ++M  KGI+P +VT + L     
Sbjct: 119 QFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFC 178

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ 262
            + Q+  +  +  ++ +     +T    T + GLC  G + +++     +     +++  
Sbjct: 179 HLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQV 238

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
           +Y  L++GLCK G    A++L R +  R    DVV YN +I GLC D  +++A+D + +M
Sbjct: 239 SYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEM 298

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               + P+VI + TLI GF    +      LL++M  K + PD    ++++D L
Sbjct: 299 NSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDAL 352



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 78/140 (55%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + +TY +++DGLCK   +DKA ALF++MK   I P+  TY +LI GLC       A++LF
Sbjct: 481 DVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLF 540

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             ++ +G    V T+NV++  LCK G +DEA  +   M      P+A T+  ++      
Sbjct: 541 QHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEK 600

Query: 135 GKINRAEELFGSMESMGCKH 154
            + ++AE+L   M + G  H
Sbjct: 601 DENDKAEKLLHEMIAKGLLH 620



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +  TYN +I GLCKEG +D+A A+  +M+     PD VT+  +I  L   ++ ++A+
Sbjct: 548 CCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAE 607

Query: 72  RLFFEMMDQGV 82
           +L  EM+ +G+
Sbjct: 608 KLLHEMIAKGL 618


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 137/367 (37%), Positives = 217/367 (59%), Gaps = 11/367 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V Y+ IIDGLCK+G    +  LF++M+ + I P++VTYN +I G C +  W+ A+R
Sbjct: 250 KPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQR 309

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+++ + P+VVT+N +++   K GK  EA+ L D M+ R + PN  TY++++DGFC
Sbjct: 310 LLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFC 369

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +++ AE++F  M + GC  D  ++  LI+GYC  K +++ + L  EM  +G+    V
Sbjct: 370 KQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTV 429

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G   +  +  AL L ++M    V  D  T NT +DGLC NG + +A+E+F+ +
Sbjct: 430 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 489

Query: 253 GILKCEL-----------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
              K +L           D+  YN LI GL   G+   A EL+  +P R +V D +TY+ 
Sbjct: 490 QKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 549

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           MI GLC   ++D+A  +F+ M   + +PNV+ F TLI+G+ +  +    +EL  +M  + 
Sbjct: 550 MIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRG 609

Query: 362 VMPDASI 368
           ++ DA I
Sbjct: 610 IVADAII 616



 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 209/376 (55%), Gaps = 16/376 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN---PDVVTYNSLIHGLCHANDWNE 69
           +P+ +TY T +DG+CK G  D   AL L  K E I+   P+VV Y+++I GLC     ++
Sbjct: 214 QPDQITYGTFVDGMCKMG--DTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSD 271

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           +  LF EM D+G+ P++VT+N ++   C +G+   A RLL  M++R + PN  TY+ L++
Sbjct: 272 SHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALIN 331

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            F   GK   A EL+  M   G   + ++YN +I+G+CK   ++ A  ++  M +KG  P
Sbjct: 332 AFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSP 391

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V T+ TL  G     +++  ++L  EM R  + A+T TYNT I G C  G +  A++L 
Sbjct: 392 DVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLS 451

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL-----------PRRVLVADVVT 298
           + +       DI   N L+DGLC +G+L+ ALE+F+++           P   +  DV+T
Sbjct: 452 QQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLT 511

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           YNI+I GL N+G+  +A +L+ +M    + P+ I + ++I G  + ++  +  ++   M 
Sbjct: 512 YNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMG 571

Query: 359 EKKVMPDASIVSMVVD 374
            K   P+    + +++
Sbjct: 572 SKSFSPNVVTFNTLIN 587



 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 122/357 (34%), Positives = 197/357 (55%), Gaps = 11/357 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PN VTYN +I+   KEG   +A  L+ +M    I P+ +TYNS+I G C  +  + A+ 
Sbjct: 320 SPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAED 379

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F+ M  +G  P V TF  ++D  C   ++D+   LL  M +R +  N  TY+TL+ GFC
Sbjct: 380 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 439

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK------- 185
           L G +N A +L   M S G   D V+ N L++G C N ++++AL +++ M          
Sbjct: 440 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 499

Query: 186 ----GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
               G++P V+TYN L  GL    +   A +L+EEM    +  DT TY++ IDGLCK   
Sbjct: 500 HPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 559

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           + EA ++F ++G      ++  +N LI+G CK+GR++  LELF  + RR +VAD + Y  
Sbjct: 560 LDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT 619

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           +I+G    G ++ A D+F +M  + V P+ I    ++ GF    +  + + +L  ++
Sbjct: 620 LIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/355 (34%), Positives = 191/355 (53%), Gaps = 5/355 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+ T++ GLC +  V +A  LF Q+      PDV+T+ +L++GLC      EA  L
Sbjct: 149 PDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVAL 204

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ-RDVRPNAFTYSTLMDGFC 132
              M++ G+QP  +T+   +D +CK G    A  LL  M +   ++PN   YS ++DG C
Sbjct: 205 LDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLC 264

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+ + +  LF  M+  G   + V+YN +I G+C +     A  L +EM+ + I P VV
Sbjct: 265 KDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVV 324

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L     +  +   A +L++EM    +  +T TYN+ IDG CK   +  A ++F  +
Sbjct: 325 TYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLM 384

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D+  +  LIDG C + R++  +EL   +PRR LVA+ VTYN +IHG C  G +
Sbjct: 385 ATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDL 444

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           + A DL   M  + V P+++   TL+ G     K    +E+   M++ K+  DAS
Sbjct: 445 NAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 499



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 188/363 (51%), Gaps = 11/363 (3%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++  +I   C    +  A + F ++    ++PDVVT+ +L+HGLC  +  +EA  LF ++
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
                +P V+TF  +M+ LC+ G++ EA  LLD MV+  ++P+  TY T +DG C  G  
Sbjct: 178 ----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDT 233

Query: 138 NRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
             A  L   ME +   K + V Y+ +I+G CK+    ++ +L+ EM  KGI P +VTYN 
Sbjct: 234 VSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNC 293

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---G 253
           +  G     +   A +L +EM    ++ +  TYN  I+   K G   EA EL+  +   G
Sbjct: 294 MIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRG 353

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           I+    +   YN +IDG CK  RL+ A ++F  +  +    DV T+  +I G C   ++D
Sbjct: 354 IIP---NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRID 410

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
              +L  +M    +  N + + TLIHGF  +   +  ++L  +M    V PD    + ++
Sbjct: 411 DGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 470

Query: 374 DLL 376
           D L
Sbjct: 471 DGL 473



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 163/307 (53%), Gaps = 5/307 (1%)

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  LF +M+     PSV+ FN +M  + +  + D    L   M ++ +R + ++++ L+
Sbjct: 64  DAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILI 123

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
             FC   K+  A   FG +  +G   D V++  L++G C +  V EAL L+ ++     +
Sbjct: 124 KCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC----R 179

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P V+T+ TL  GL    +V  A+ L + M  + +  D  TY TF+DG+CK G  V A+ L
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239

Query: 249 FRTLG-ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            R +  I   + ++  Y+ +IDGLCK GR   +  LF  +  + +  ++VTYN MI G C
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G+   A  L  +M E  ++PNV+ +  LI+ FV+  K  +  EL  +M  + ++P+  
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359

Query: 368 IVSMVVD 374
             + ++D
Sbjct: 360 TYNSMID 366



 Score =  160 bits (405), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 142/291 (48%), Gaps = 11/291 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  T+ T+IDG C    +D    L  +M    +  + VTYN+LIHG C   D N A 
Sbjct: 389 CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAAL 448

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-----------VRPN 120
            L  +M+  GV P +VT N ++D LC NGK+ +A  +   M +             V P+
Sbjct: 449 DLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPD 508

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY+ L+ G    GK   AEEL+  M   G   D ++Y+ +I+G CK   ++EA  ++ 
Sbjct: 509 VLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFV 568

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            M SK   P VVT+NTL  G  +  +V+  L+LF EM R  + AD   Y T I G  K G
Sbjct: 569 SMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVG 628

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            I  A+++F+ +       D      ++ G      LE A+ +   L   V
Sbjct: 629 NINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMSV 679



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 170/344 (49%), Gaps = 5/344 (1%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           ++ A  LF  M      P V+ +N L+  +      +    L+ +M  + ++  + +F +
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           ++   C   K+  A      + +  + P+  T++TL+ G CL  +++ A +LF  +    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
           C+ D +++  L+NG C+   V EA++L   MV  G++P  +TY T   G+ ++     AL
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 212 KLFEEMQR-DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
            L  +M+    +  +   Y+  IDGLCK+G   ++  LF  +       +I  YNC+I G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
            C SGR   A  L + +  R +  +VVTYN +I+    +G+  +A +L+ +M    + PN
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            I + ++I GF + ++     ++ + M  K   PD    + ++D
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 401



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 123/219 (56%), Gaps = 12/219 (5%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-----------NINPDVVTYNSLIH 59
           VC P+ VT NT++DGLC  G +  A  +F  M+              + PDV+TYN LI 
Sbjct: 459 VC-PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 517

Query: 60  GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
           GL +   + EA+ L+ EM  +G+ P  +T++ ++D LCK  ++DEA+++   M  +   P
Sbjct: 518 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSP 577

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           N  T++TL++G+C  G+++   ELF  M   G   D + Y  LI G+ K   +  AL ++
Sbjct: 578 NVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIF 637

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +EM+S G+ P  +T   +  G +   ++E A+ + E++Q
Sbjct: 638 QEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 110/216 (50%), Gaps = 5/216 (2%)

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L +G  + K +E+A+ L+ +M+     P+V+ +N L   +  + + +  + L+++M+R  
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           +  D  ++   I   C    +  A+  F  L  L    D+  +  L+ GLC   R+  AL
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           +LF  + R     DV+T+  +++GLC +G++ +A  L   M EN + P+ I + T + G 
Sbjct: 172 DLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 342 VRINKPSKVIELLHKMKE-KKVMPDASIVSMVVDLL 376
            ++      + LL KM+E   + P+  I S ++D L
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGL 263


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  275 bits (704), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 137/367 (37%), Positives = 217/367 (59%), Gaps = 11/367 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V Y+ IIDGLCK+G    +  LF++M+ + I P++VTYN +I G C +  W+ A+R
Sbjct: 250 KPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQR 309

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+++ + P+VVT+N +++   K GK  EA+ L D M+ R + PN  TY++++DGFC
Sbjct: 310 LLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFC 369

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +++ AE++F  M + GC  D  ++  LI+GYC  K +++ + L  EM  +G+    V
Sbjct: 370 KQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTV 429

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G   +  +  AL L ++M    V  D  T NT +DGLC NG + +A+E+F+ +
Sbjct: 430 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 489

Query: 253 GILKCEL-----------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
              K +L           D+  YN LI GL   G+   A EL+  +P R +V D +TY+ 
Sbjct: 490 QKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 549

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           MI GLC   ++D+A  +F+ M   + +PNV+ F TLI+G+ +  +    +EL  +M  + 
Sbjct: 550 MIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRG 609

Query: 362 VMPDASI 368
           ++ DA I
Sbjct: 610 IVADAII 616



 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 122/361 (33%), Positives = 199/361 (55%), Gaps = 11/361 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PN VTYN +I+   KEG   +A  L+ +M    I P+ +TYNS+I G C  +  + A+ 
Sbjct: 320 SPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAED 379

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F+ M  +G  P V TF  ++D  C   ++D+   LL  M +R +  N  TY+TL+ GFC
Sbjct: 380 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 439

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK------- 185
           L G +N A +L   M S G   D V+ N L++G C N ++++AL +++ M          
Sbjct: 440 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 499

Query: 186 ----GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
               G++P V+TYN L  GL    +   A +L+EEM    +  DT TY++ IDGLCK   
Sbjct: 500 HPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 559

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           + EA ++F ++G      ++  +N LI+G CK+GR++  LELF  + RR +VAD + Y  
Sbjct: 560 LDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT 619

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +I+G    G ++ A D+F +M  + V P+ I    ++ GF    +  + + +L  ++  +
Sbjct: 620 LIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQ 679

Query: 362 V 362
           +
Sbjct: 680 L 680



 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 209/376 (55%), Gaps = 16/376 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN---PDVVTYNSLIHGLCHANDWNE 69
           +P+ +TY T +DG+CK G  D   AL L  K E I+   P+VV Y+++I GLC     ++
Sbjct: 214 QPDQITYGTFVDGMCKMG--DTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSD 271

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           +  LF EM D+G+ P++VT+N ++   C +G+   A RLL  M++R + PN  TY+ L++
Sbjct: 272 SHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALIN 331

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            F   GK   A EL+  M   G   + ++YN +I+G+CK   ++ A  ++  M +KG  P
Sbjct: 332 AFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSP 391

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V T+ TL  G     +++  ++L  EM R  + A+T TYNT I G C  G +  A++L 
Sbjct: 392 DVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLS 451

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL-----------PRRVLVADVVT 298
           + +       DI   N L+DGLC +G+L+ ALE+F+++           P   +  DV+T
Sbjct: 452 QQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLT 511

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           YNI+I GL N+G+  +A +L+ +M    + P+ I + ++I G  + ++  +  ++   M 
Sbjct: 512 YNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMG 571

Query: 359 EKKVMPDASIVSMVVD 374
            K   P+    + +++
Sbjct: 572 SKSFSPNVVTFNTLIN 587



 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/355 (34%), Positives = 191/355 (53%), Gaps = 5/355 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+ T++ GLC +  V +A  LF Q+      PDV+T+ +L++GLC      EA  L
Sbjct: 149 PDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVAL 204

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ-RDVRPNAFTYSTLMDGFC 132
              M++ G+QP  +T+   +D +CK G    A  LL  M +   ++PN   YS ++DG C
Sbjct: 205 LDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLC 264

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+ + +  LF  M+  G   + V+YN +I G+C +     A  L +EM+ + I P VV
Sbjct: 265 KDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVV 324

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L     +  +   A +L++EM    +  +T TYN+ IDG CK   +  A ++F  +
Sbjct: 325 TYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLM 384

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D+  +  LIDG C + R++  +EL   +PRR LVA+ VTYN +IHG C  G +
Sbjct: 385 ATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDL 444

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           + A DL   M  + V P+++   TL+ G     K    +E+   M++ K+  DAS
Sbjct: 445 NAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 499



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 188/363 (51%), Gaps = 11/363 (3%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++  +I   C    +  A + F ++    ++PDVVT+ +L+HGLC  +  +EA  LF ++
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
                +P V+TF  +M+ LC+ G++ EA  LLD MV+  ++P+  TY T +DG C  G  
Sbjct: 178 ----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDT 233

Query: 138 NRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
             A  L   ME +   K + V Y+ +I+G CK+    ++ +L+ EM  KGI P +VTYN 
Sbjct: 234 VSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNC 293

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---G 253
           +  G     +   A +L +EM    ++ +  TYN  I+   K G   EA EL+  +   G
Sbjct: 294 MIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRG 353

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           I+    +   YN +IDG CK  RL+ A ++F  +  +    DV T+  +I G C   ++D
Sbjct: 354 IIP---NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRID 410

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
              +L  +M    +  N + + TLIHGF  +   +  ++L  +M    V PD    + ++
Sbjct: 411 DGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 470

Query: 374 DLL 376
           D L
Sbjct: 471 DGL 473



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 163/307 (53%), Gaps = 5/307 (1%)

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  LF +M+     PSV+ FN +M  + +  + D    L   M ++ +R + ++++ L+
Sbjct: 64  DAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILI 123

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
             FC   K+  A   FG +  +G   D V++  L++G C +  V EAL L+ ++     +
Sbjct: 124 KCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC----R 179

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P V+T+ TL  GL    +V  A+ L + M  + +  D  TY TF+DG+CK G  V A+ L
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239

Query: 249 FRTLG-ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            R +  I   + ++  Y+ +IDGLCK GR   +  LF  +  + +  ++VTYN MI G C
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G+   A  L  +M E  ++PNV+ +  LI+ FV+  K  +  EL  +M  + ++P+  
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359

Query: 368 IVSMVVD 374
             + ++D
Sbjct: 360 TYNSMID 366



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 143/292 (48%), Gaps = 11/292 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  T+ T+IDG C    +D    L  +M    +  + VTYN+LIHG C   D N A 
Sbjct: 389 CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAAL 448

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-----------VRPN 120
            L  +M+  GV P +VT N ++D LC NGK+ +A  +   M +             V P+
Sbjct: 449 DLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPD 508

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY+ L+ G    GK   AEEL+  M   G   D ++Y+ +I+G CK   ++EA  ++ 
Sbjct: 509 VLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFV 568

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            M SK   P VVT+NTL  G  +  +V+  L+LF EM R  + AD   Y T I G  K G
Sbjct: 569 SMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVG 628

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
            I  A+++F+ +       D      ++ G      LE A+ +   L R  L
Sbjct: 629 NINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQL 680



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 170/344 (49%), Gaps = 5/344 (1%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           ++ A  LF  M      P V+ +N L+  +      +    L+ +M  + ++  + +F +
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           ++   C   K+  A      + +  + P+  T++TL+ G CL  +++ A +LF  +    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
           C+ D +++  L+NG C+   V EA++L   MV  G++P  +TY T   G+ ++     AL
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 212 KLFEEMQR-DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
            L  +M+    +  +   Y+  IDGLCK+G   ++  LF  +       +I  YNC+I G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
            C SGR   A  L + +  R +  +VVTYN +I+    +G+  +A +L+ +M    + PN
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            I + ++I GF + ++     ++ + M  K   PD    + ++D
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 401



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 12/220 (5%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-----------NINPDVVTYNSLIH 59
           VC P+ VT NT++DGLC  G +  A  +F  M+              + PDV+TYN LI 
Sbjct: 459 VC-PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 517

Query: 60  GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
           GL +   + EA+ L+ EM  +G+ P  +T++ ++D LCK  ++DEA+++   M  +   P
Sbjct: 518 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSP 577

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           N  T++TL++G+C  G+++   ELF  M   G   D + Y  LI G+ K   +  AL ++
Sbjct: 578 NVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIF 637

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           +EM+S G+ P  +T   +  G +   ++E A+ + E++QR
Sbjct: 638 QEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQR 677



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 110/216 (50%), Gaps = 5/216 (2%)

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L +G  + K +E+A+ L+ +M+     P+V+ +N L   +  + + +  + L+++M+R  
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           +  D  ++   I   C    +  A+  F  L  L    D+  +  L+ GLC   R+  AL
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           +LF  + R     DV+T+  +++GLC +G++ +A  L   M EN + P+ I + T + G 
Sbjct: 172 DLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 342 VRINKPSKVIELLHKMKE-KKVMPDASIVSMVVDLL 376
            ++      + LL KM+E   + P+  I S ++D L
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGL 263


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  275 bits (703), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 134/364 (36%), Positives = 213/364 (58%), Gaps = 11/364 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y+ IID LCK+G    A+ LF +M+ + I PD+ TYNS+I G C +  W++A++L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+++ + P VVT+N +++   K GK  EA  L D M+ R + PN  TYS+++DGFC 
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +++ AE +F  M + GC  + +++N LI+GYC  K +++ + L  EM   G+     T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G + +  +  AL L +EM    +  D  T +T +DGLC NG + +A+E+F+ + 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 254 ILKCEL-----------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
             K +L           D+Q YN LI GL   G+   A EL+  +P R +V D +TY+ M
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I GLC   ++D+A  +F  M   + +PNV+ F TLI+G+ +  +    +EL  +M  + +
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 363 MPDA 366
           + +A
Sbjct: 613 VANA 616



 Score =  221 bits (562), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 209/376 (55%), Gaps = 16/376 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN---PDVVTYNSLIHGLCHANDWNE 69
           +P  +TY TI+DG+CK+G  D   AL L  K E ++   P+VV Y+++I  LC     ++
Sbjct: 216 QPTQITYGTIVDGMCKKG--DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+ LF EM ++G+ P + T+N ++   C +G+  +A +LL  M++R + P+  TY+ L++
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            F   GK   AEEL+  M   G   + ++Y+ +I+G+CK   ++ A  ++  M +KG  P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            ++T+NTL  G     +++  ++L  EM    + ADT+TYNT I G    G +  A++L 
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR-----------SLPRRVLVADVVT 298
           + +       DI   + L+DGLC +G+L+ ALE+F+           S P   +  DV T
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           YNI+I GL N+G+  +A +L+ +M    + P+ I + ++I G  + ++  +  ++   M 
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573

Query: 359 EKKVMPDASIVSMVVD 374
            K   P+    + +++
Sbjct: 574 SKSFSPNVVTFTTLIN 589



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 116/357 (32%), Positives = 197/357 (55%), Gaps = 11/357 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ VTYN +I+   KEG   +A+ L+ +M    I P+ +TY+S+I G C  N  + A+ 
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F+ M  +G  P+++TFN ++D  C   ++D+   LL  M +  +  +  TY+TL+ GF 
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK------- 185
           L G +N A +L   M S G   D V+ + L++G C N ++++AL +++ M          
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501

Query: 186 ----GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
               G++P V TYN L  GL    +   A +L+EEM    +  DT TY++ IDGLCK   
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           + EA ++F ++G      ++  +  LI+G CK+GR++  LELF  + RR +VA+ +TY  
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           +I G    G ++ A D+F +M  + V P+ I    ++ G     +  + + +L K++
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 121/355 (34%), Positives = 188/355 (52%), Gaps = 1/355 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+NT++ GLC E  V +A  LF QM      P+VVT+ +L++GLC      EA  L
Sbjct: 147 PDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVAL 206

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ-RDVRPNAFTYSTLMDGFC 132
              MM+ G+QP+ +T+  I+D +CK G    A  LL  M +   + PN   YS ++D  C
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC 266

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+ + A+ LF  M+  G   D  +YN +I G+C +    +A  L +EM+ + I P VV
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L     +  +   A +L++EM    +  +T TY++ IDG CK   +  A  +F  +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  ++  +N LIDG C + R++  +EL   +    LVAD  TYN +IHG    G +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           + A DL  +M  + + P+++   TL+ G     K    +E+   M++ K   DAS
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 191/363 (52%), Gaps = 7/363 (1%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++  +I   C    +  A + F ++    ++PDVVT+N+L+HGLC  +  +EA  LF +M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
            +   +P+VVTF  +M+ LC+ G++ EA  LLD M++  ++P   TY T++DG C  G  
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235

Query: 138 NRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
             A  L   ME +     + V Y+ +I+  CK+    +A +L+ EM  KGI P + TYN+
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---G 253
           + +G     +   A +L +EM    ++ D  TYN  I+   K G   EA EL+  +   G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           I+    +   Y+ +IDG CK  RL+ A  +F  +  +    +++T+N +I G C   ++D
Sbjct: 356 IIP---NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
              +L  +M E  +  +   + TLIHGF  +   +  ++LL +M    + PD      ++
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 374 DLL 376
           D L
Sbjct: 473 DGL 475



 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 180/361 (49%), Gaps = 1/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +  ++  + +    D   +L+ +M+ + I  D+ ++  LI   C  +    A   
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F ++   G+ P VVTFN ++  LC   ++ EA  L   M +   RPN  T++TLM+G C 
Sbjct: 137 FGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIKPTVV 192
            G+I  A  L   M   G +   ++Y  +++G CK  +   AL+L R+M     I P VV
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ +   L +  +   A  LF EMQ   +  D  TYN+ I G C +G   +A +L + +
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K   D+  YN LI+   K G+   A EL+  +  R ++ + +TY+ MI G C   ++
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  +F  M     +PN+I F TLI G+    +    +ELLH+M E  ++ D +  + +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 373 V 373
           +
Sbjct: 437 I 437



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 161/319 (50%), Gaps = 1/319 (0%)

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
           L  G        +A  LF +M+     PSVV F  +M  + +  + D    L   M ++ 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           +R + ++++ L+  FC   K+  A   FG +  +G   D V++N L++G C    V EAL
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           +L+ +M     +P VVT+ TL  GL    ++  A+ L + M  D +     TY T +DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 237 CKNGYIVEAVELFRTL-GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           CK G  V A+ L R +  +     ++  Y+ +ID LCK GR   A  LF  +  + +  D
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           + TYN MI G C+ G+   A  L  +M E  ++P+V+ +  LI+ FV+  K  +  EL  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 356 KMKEKKVMPDASIVSMVVD 374
           +M  + ++P+    S ++D
Sbjct: 350 EMLPRGIIPNTITYSSMID 368



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 132/252 (52%), Gaps = 11/252 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN +T+NT+IDG C    +D    L  +M    +  D  TYN+LIHG     D N A 
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-----------VRPN 120
            L  EM+  G+ P +VT + ++D LC NGK+ +A  +  +M +             V P+
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPD 510

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY+ L+ G    GK   AEEL+  M   G   D ++Y+ +I+G CK   ++EA  ++ 
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            M SK   P VVT+ TL  G  +  +V+  L+LF EM R  + A+  TY T I G  K G
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630

Query: 241 YIVEAVELFRTL 252
            I  A+++F+ +
Sbjct: 631 NINGALDIFQEM 642



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 167/344 (48%), Gaps = 1/344 (0%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           ++ A  LF  M      P VV +  L+  +      +    L+ +M  + ++  + +F +
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           ++   C   K+  A      + +  + P+  T++TL+ G C+  +++ A  LF  M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
           C+ + V++  L+NG C+   + EA++L   M+  G++PT +TY T+  G+ +      AL
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 212 KLFEEMQR-DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
            L  +M+    +  +   Y+  ID LCK+G   +A  LF  +       D+  YN +I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
            C SGR   A +L + +  R +  DVVTYN +I+    +G+  +A +L+ +M    + PN
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            I + ++I GF + N+      + + M  K   P+    + ++D
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 109/216 (50%), Gaps = 1/216 (0%)

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L +G+ + K +E+A+ L+ +M+     P+VV +  L   +  + + +  + L+++M+R  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           +  D  ++   I   C    +  A+  F  +  L    D+  +N L+ GLC   R+  AL
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            LF  +       +VVT+  +++GLC +G++ +A  L   M E+ + P  I + T++ G 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 342 VRINKPSKVIELLHKMKE-KKVMPDASIVSMVVDLL 376
            +       + LL KM+E   ++P+  I S ++D L
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL 265


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  275 bits (703), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 134/364 (36%), Positives = 213/364 (58%), Gaps = 11/364 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y+ IID LCK+G    A+ LF +M+ + I PD+ TYNS+I G C +  W++A++L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+++ + P VVT+N +++   K GK  EA  L D M+ R + PN  TYS+++DGFC 
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +++ AE +F  M + GC  + +++N LI+GYC  K +++ + L  EM   G+     T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G + +  +  AL L +EM    +  D  T +T +DGLC NG + +A+E+F+ + 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 254 ILKCEL-----------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
             K +L           D+Q YN LI GL   G+   A EL+  +P R +V D +TY+ M
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I GLC   ++D+A  +F  M   + +PNV+ F TLI+G+ +  +    +EL  +M  + +
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 363 MPDA 366
           + +A
Sbjct: 613 VANA 616



 Score =  221 bits (562), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 209/376 (55%), Gaps = 16/376 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN---PDVVTYNSLIHGLCHANDWNE 69
           +P  +TY TI+DG+CK+G  D   AL L  K E ++   P+VV Y+++I  LC     ++
Sbjct: 216 QPTQITYGTIVDGMCKKG--DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+ LF EM ++G+ P + T+N ++   C +G+  +A +LL  M++R + P+  TY+ L++
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            F   GK   AEEL+  M   G   + ++Y+ +I+G+CK   ++ A  ++  M +KG  P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            ++T+NTL  G     +++  ++L  EM    + ADT+TYNT I G    G +  A++L 
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR-----------SLPRRVLVADVVT 298
           + +       DI   + L+DGLC +G+L+ ALE+F+           S P   +  DV T
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           YNI+I GL N+G+  +A +L+ +M    + P+ I + ++I G  + ++  +  ++   M 
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573

Query: 359 EKKVMPDASIVSMVVD 374
            K   P+    + +++
Sbjct: 574 SKSFSPNVVTFTTLIN 589



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 116/357 (32%), Positives = 197/357 (55%), Gaps = 11/357 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ VTYN +I+   KEG   +A+ L+ +M    I P+ +TY+S+I G C  N  + A+ 
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F+ M  +G  P+++TFN ++D  C   ++D+   LL  M +  +  +  TY+TL+ GF 
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK------- 185
           L G +N A +L   M S G   D V+ + L++G C N ++++AL +++ M          
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501

Query: 186 ----GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
               G++P V TYN L  GL    +   A +L+EEM    +  DT TY++ IDGLCK   
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           + EA ++F ++G      ++  +  LI+G CK+GR++  LELF  + RR +VA+ +TY  
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           +I G    G ++ A D+F +M  + V P+ I    ++ G     +  + + +L K++
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 120/355 (33%), Positives = 187/355 (52%), Gaps = 1/355 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+ T++ GLC E  V +A  LF QM      P+VVT+ +L++GLC      EA  L
Sbjct: 147 PDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVAL 206

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ-RDVRPNAFTYSTLMDGFC 132
              MM+ G+QP+ +T+  I+D +CK G    A  LL  M +   + PN   YS ++D  C
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC 266

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+ + A+ LF  M+  G   D  +YN +I G+C +    +A  L +EM+ + I P VV
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L     +  +   A +L++EM    +  +T TY++ IDG CK   +  A  +F  +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  ++  +N LIDG C + R++  +EL   +    LVAD  TYN +IHG    G +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           + A DL  +M  + + P+++   TL+ G     K    +E+   M++ K   DAS
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 191/363 (52%), Gaps = 7/363 (1%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++N +I   C    +  A + F ++    ++PDVVT+ +L+HGLC  +  +EA  LF +M
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQM 175

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
            +   +P+VVTF  +M+ LC+ G++ EA  LLD M++  ++P   TY T++DG C  G  
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235

Query: 138 NRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
             A  L   ME +     + V Y+ +I+  CK+    +A +L+ EM  KGI P + TYN+
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---G 253
           + +G     +   A +L +EM    ++ D  TYN  I+   K G   EA EL+  +   G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           I+    +   Y+ +IDG CK  RL+ A  +F  +  +    +++T+N +I G C   ++D
Sbjct: 356 IIP---NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
              +L  +M E  +  +   + TLIHGF  +   +  ++LL +M    + PD      ++
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 374 DLL 376
           D L
Sbjct: 473 DGL 475



 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 180/361 (49%), Gaps = 1/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +  ++  + +    D   +L+ +M+ + I  D+ ++N LI   C  +    A   
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F ++   G+ P VVTF  ++  LC   ++ EA  L   M +   RPN  T++TLM+G C 
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIKPTVV 192
            G+I  A  L   M   G +   ++Y  +++G CK  +   AL+L R+M     I P VV
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ +   L +  +   A  LF EMQ   +  D  TYN+ I G C +G   +A +L + +
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K   D+  YN LI+   K G+   A EL+  +  R ++ + +TY+ MI G C   ++
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  +F  M     +PN+I F TLI G+    +    +ELLH+M E  ++ D +  + +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 373 V 373
           +
Sbjct: 437 I 437



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 160/319 (50%), Gaps = 1/319 (0%)

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
           L  G        +A  LF +M+     PSVV F  +M  + +  + D    L   M ++ 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           +R + ++++ L+  FC   K+  A   FG +  +G   D V++  L++G C    V EAL
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           +L+ +M     +P VVT+ TL  GL    ++  A+ L + M  D +     TY T +DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 237 CKNGYIVEAVELFRTL-GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           CK G  V A+ L R +  +     ++  Y+ +ID LCK GR   A  LF  +  + +  D
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           + TYN MI G C+ G+   A  L  +M E  ++P+V+ +  LI+ FV+  K  +  EL  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 356 KMKEKKVMPDASIVSMVVD 374
           +M  + ++P+    S ++D
Sbjct: 350 EMLPRGIIPNTITYSSMID 368



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 132/252 (52%), Gaps = 11/252 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN +T+NT+IDG C    +D    L  +M    +  D  TYN+LIHG     D N A 
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-----------VRPN 120
            L  EM+  G+ P +VT + ++D LC NGK+ +A  +  +M +             V P+
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPD 510

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY+ L+ G    GK   AEEL+  M   G   D ++Y+ +I+G CK   ++EA  ++ 
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            M SK   P VVT+ TL  G  +  +V+  L+LF EM R  + A+  TY T I G  K G
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630

Query: 241 YIVEAVELFRTL 252
            I  A+++F+ +
Sbjct: 631 NINGALDIFQEM 642



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 168/344 (48%), Gaps = 1/344 (0%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           ++ A  LF  M      P VV +  L+  +      +    L+ +M  + ++  + +FN+
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           ++   C   K+  A      + +  + P+  T++TL+ G C+  +++ A  LF  M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
           C+ + V++  L+NG C+   + EA++L   M+  G++PT +TY T+  G+ +      AL
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 212 KLFEEMQR-DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
            L  +M+    +  +   Y+  ID LCK+G   +A  LF  +       D+  YN +I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
            C SGR   A +L + +  R +  DVVTYN +I+    +G+  +A +L+ +M    + PN
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            I + ++I GF + N+      + + M  K   P+    + ++D
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 109/216 (50%), Gaps = 1/216 (0%)

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L +G+ + K +E+A+ L+ +M+     P+VV +  L   +  + + +  + L+++M+R  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           +  D  ++N  I   C    +  A+  F  +  L    D+  +  L+ GLC   R+  AL
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            LF  +       +VVT+  +++GLC +G++ +A  L   M E+ + P  I + T++ G 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 342 VRINKPSKVIELLHKMKE-KKVMPDASIVSMVVDLL 376
            +       + LL KM+E   ++P+  I S ++D L
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL 265


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  275 bits (703), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 134/364 (36%), Positives = 213/364 (58%), Gaps = 11/364 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y+ IID LCK+G    A+ LF +M+ + I PD+ TYNS+I G C +  W++A++L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+++ + P VVT+N +++   K GK  EA  L D M+ R + PN  TYS+++DGFC 
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +++ AE +F  M + GC  + +++N LI+GYC  K +++ + L  EM   G+     T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G + +  +  AL L +EM    +  D  T +T +DGLC NG + +A+E+F+ + 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 254 ILKCEL-----------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
             K +L           D+Q YN LI GL   G+   A EL+  +P R +V D +TY+ M
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I GLC   ++D+A  +F  M   + +PNV+ F TLI+G+ +  +    +EL  +M  + +
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 363 MPDA 366
           + +A
Sbjct: 613 VANA 616



 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 209/376 (55%), Gaps = 16/376 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN---PDVVTYNSLIHGLCHANDWNE 69
           +P  +TY TI+DG+CK+G  D   AL L  K E ++   P+VV Y+++I  LC     ++
Sbjct: 216 QPTQITYGTIVDGMCKKG--DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+ LF EM ++G+ P + T+N ++   C +G+  +A +LL  M++R + P+  TY+ L++
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            F   GK   AEEL+  M   G   + ++Y+ +I+G+CK   ++ A  ++  M +KG  P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            ++T+NTL  G     +++  ++L  EM    + ADT+TYNT I G    G +  A++L 
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR-----------SLPRRVLVADVVT 298
           + +       DI   + L+DGLC +G+L+ ALE+F+           S P   +  DV T
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           YNI+I GL N+G+  +A +L+ +M    + P+ I + ++I G  + ++  +  ++   M 
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573

Query: 359 EKKVMPDASIVSMVVD 374
            K   P+    + +++
Sbjct: 574 SKSFSPNVVTFTTLIN 589



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 116/357 (32%), Positives = 197/357 (55%), Gaps = 11/357 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ VTYN +I+   KEG   +A+ L+ +M    I P+ +TY+S+I G C  N  + A+ 
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F+ M  +G  P+++TFN ++D  C   ++D+   LL  M +  +  +  TY+TL+ GF 
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK------- 185
           L G +N A +L   M S G   D V+ + L++G C N ++++AL +++ M          
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501

Query: 186 ----GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
               G++P V TYN L  GL    +   A +L+EEM    +  DT TY++ IDGLCK   
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           + EA ++F ++G      ++  +  LI+G CK+GR++  LELF  + RR +VA+ +TY  
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           +I G    G ++ A D+F +M  + V P+ I    ++ G     +  + + +L K++
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 121/355 (34%), Positives = 188/355 (52%), Gaps = 1/355 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+NT++ GLC E  V +A  LF QM      P+VVT+ +L++GLC      EA  L
Sbjct: 147 PDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVAL 206

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ-RDVRPNAFTYSTLMDGFC 132
              MM+ G+QP+ +T+  I+D +CK G    A  LL  M +   + PN   YS ++D  C
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC 266

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+ + A+ LF  M+  G   D  +YN +I G+C +    +A  L +EM+ + I P VV
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L     +  +   A +L++EM    +  +T TY++ IDG CK   +  A  +F  +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  ++  +N LIDG C + R++  +EL   +    LVAD  TYN +IHG    G +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           + A DL  +M  + + P+++   TL+ G     K    +E+   M++ K   DAS
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 191/363 (52%), Gaps = 7/363 (1%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++  +I   C    +  A + F ++    ++PDVVT+N+L+HGLC  +  +EA  LF +M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
            +   +P+VVTF  +M+ LC+ G++ EA  LLD M++  ++P   TY T++DG C  G  
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235

Query: 138 NRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
             A  L   ME +     + V Y+ +I+  CK+    +A +L+ EM  KGI P + TYN+
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---G 253
           + +G     +   A +L +EM    ++ D  TYN  I+   K G   EA EL+  +   G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           I+    +   Y+ +IDG CK  RL+ A  +F  +  +    +++T+N +I G C   ++D
Sbjct: 356 IIP---NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
              +L  +M E  +  +   + TLIHGF  +   +  ++LL +M    + PD      ++
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 374 DLL 376
           D L
Sbjct: 473 DGL 475



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 180/361 (49%), Gaps = 1/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +  ++  + +    D   +L+ +M+ + I  D+ ++  LI   C  +    A   
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F ++   G+ P VVTFN ++  LC   ++ EA  L   M +   RPN  T++TLM+G C 
Sbjct: 137 FGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIKPTVV 192
            G+I  A  L   M   G +   ++Y  +++G CK  +   AL+L R+M     I P VV
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ +   L +  +   A  LF EMQ   +  D  TYN+ I G C +G   +A +L + +
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K   D+  YN LI+   K G+   A EL+  +  R ++ + +TY+ MI G C   ++
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  +F  M     +PN+I F TLI G+    +    +ELLH+M E  ++ D +  + +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 373 V 373
           +
Sbjct: 437 I 437



 Score =  165 bits (417), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 161/319 (50%), Gaps = 1/319 (0%)

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
           L  G        +A  LF +M+     PSVV F  +M  + +  + D    L   M ++ 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           +R + ++++ L+  FC   K+  A   FG +  +G   D V++N L++G C    V EAL
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           +L+ +M     +P VVT+ TL  GL    ++  A+ L + M  D +     TY T +DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 237 CKNGYIVEAVELFRTL-GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           CK G  V A+ L R +  +     ++  Y+ +ID LCK GR   A  LF  +  + +  D
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           + TYN MI G C+ G+   A  L  +M E  ++P+V+ +  LI+ FV+  K  +  EL  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 356 KMKEKKVMPDASIVSMVVD 374
           +M  + ++P+    S ++D
Sbjct: 350 EMLPRGIIPNTITYSSMID 368



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 132/252 (52%), Gaps = 11/252 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN +T+NT+IDG C    +D    L  +M    +  D  TYN+LIHG     D N A 
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-----------VRPN 120
            L  EM+  G+ P +VT + ++D LC NGK+ +A  +  +M +             V P+
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPD 510

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY+ L+ G    GK   AEEL+  M   G   D ++Y+ +I+G CK   ++EA  ++ 
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            M SK   P VVT+ TL  G  +  +V+  L+LF EM R  + A+  TY T I G  K G
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630

Query: 241 YIVEAVELFRTL 252
            I  A+++F+ +
Sbjct: 631 NINGALDIFQEM 642



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 167/344 (48%), Gaps = 1/344 (0%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           ++ A  LF  M      P VV +  L+  +      +    L+ +M  + ++  + +F +
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           ++   C   K+  A      + +  + P+  T++TL+ G C+  +++ A  LF  M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
           C+ + V++  L+NG C+   + EA++L   M+  G++PT +TY T+  G+ +      AL
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 212 KLFEEMQR-DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
            L  +M+    +  +   Y+  ID LCK+G   +A  LF  +       D+  YN +I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
            C SGR   A +L + +  R +  DVVTYN +I+    +G+  +A +L+ +M    + PN
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            I + ++I GF + N+      + + M  K   P+    + ++D
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 109/216 (50%), Gaps = 1/216 (0%)

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L +G+ + K +E+A+ L+ +M+     P+VV +  L   +  + + +  + L+++M+R  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           +  D  ++   I   C    +  A+  F  L  L    D+  +N L+ GLC   R+  AL
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            LF  +       +VVT+  +++GLC +G++ +A  L   M E+ + P  I + T++ G 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 342 VRINKPSKVIELLHKMKE-KKVMPDASIVSMVVDLL 376
            +       + LL KM+E   ++P+  I S ++D L
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL 265


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  275 bits (703), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 134/364 (36%), Positives = 213/364 (58%), Gaps = 11/364 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y+ IID LCK+G    A+ LF +M+ + I PD+ TYNS+I G C +  W++A++L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+++ + P VVT+N +++   K GK  EA  L D M+ R + PN  TYS+++DGFC 
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +++ AE +F  M + GC  + +++N LI+GYC  K +++ + L  EM   G+     T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G + +  +  AL L +EM    +  D  T +T +DGLC NG + +A+E+F+ + 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 254 ILKCEL-----------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
             K +L           D+Q YN LI GL   G+   A EL+  +P R +V D +TY+ M
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I GLC   ++D+A  +F  M   + +PNV+ F TLI+G+ +  +    +EL  +M  + +
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 363 MPDA 366
           + +A
Sbjct: 613 VANA 616



 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 209/376 (55%), Gaps = 16/376 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN---PDVVTYNSLIHGLCHANDWNE 69
           +P  +TY TI+DG+CK+G  D   AL L  K E ++   P+VV Y+++I  LC     ++
Sbjct: 216 QPTQITYGTIVDGMCKKG--DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+ LF EM ++G+ P + T+N ++   C +G+  +A +LL  M++R + P+  TY+ L++
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            F   GK   AEEL+  M   G   + ++Y+ +I+G+CK   ++ A  ++  M +KG  P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            ++T+NTL  G     +++  ++L  EM    + ADT+TYNT I G    G +  A++L 
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR-----------SLPRRVLVADVVT 298
           + +       DI   + L+DGLC +G+L+ ALE+F+           S P   +  DV T
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           YNI+I GL N+G+  +A +L+ +M    + P+ I + ++I G  + ++  +  ++   M 
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573

Query: 359 EKKVMPDASIVSMVVD 374
            K   P+    + +++
Sbjct: 574 SKSFSPNVVTFTTLIN 589



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 116/357 (32%), Positives = 197/357 (55%), Gaps = 11/357 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ VTYN +I+   KEG   +A+ L+ +M    I P+ +TY+S+I G C  N  + A+ 
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F+ M  +G  P+++TFN ++D  C   ++D+   LL  M +  +  +  TY+TL+ GF 
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK------- 185
           L G +N A +L   M S G   D V+ + L++G C N ++++AL +++ M          
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501

Query: 186 ----GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
               G++P V TYN L  GL    +   A +L+EEM    +  DT TY++ IDGLCK   
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           + EA ++F ++G      ++  +  LI+G CK+GR++  LELF  + RR +VA+ +TY  
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           +I G    G ++ A D+F +M  + V P+ I    ++ G     +  + + +L K++
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 119/355 (33%), Positives = 186/355 (52%), Gaps = 1/355 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+ T++ GLC E  V +A   F QM      P+VVT+ +L++GLC      EA  L
Sbjct: 147 PDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVAL 206

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ-RDVRPNAFTYSTLMDGFC 132
              MM+ G+QP+ +T+  I+D +CK G    A  LL  M +   + PN   YS ++D  C
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC 266

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+ + A+ LF  M+  G   D  +YN +I G+C +    +A  L +EM+ + I P VV
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L     +  +   A +L++EM    +  +T TY++ IDG CK   +  A  +F  +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  ++  +N LIDG C + R++  +EL   +    LVAD  TYN +IHG    G +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           + A DL  +M  + + P+++   TL+ G     K    +E+   M++ K   DAS
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 190/363 (52%), Gaps = 7/363 (1%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++N +I   C    +  A + F ++    ++PDVVT+ +L+HGLC  +  +EA   F +M
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM 175

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
            +   +P+VVTF  +M+ LC+ G++ EA  LLD M++  ++P   TY T++DG C  G  
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235

Query: 138 NRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
             A  L   ME +     + V Y+ +I+  CK+    +A +L+ EM  KGI P + TYN+
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---G 253
           + +G     +   A +L +EM    ++ D  TYN  I+   K G   EA EL+  +   G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           I+    +   Y+ +IDG CK  RL+ A  +F  +  +    +++T+N +I G C   ++D
Sbjct: 356 IIP---NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
              +L  +M E  +  +   + TLIHGF  +   +  ++LL +M    + PD      ++
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 374 DLL 376
           D L
Sbjct: 473 DGL 475



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 179/361 (49%), Gaps = 1/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +  ++  + +    D   +L+ +M+ + I  D+ ++N LI   C  +    A   
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F ++   G+ P VVTF  ++  LC   ++ EA      M +   RPN  T++TLM+G C 
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIKPTVV 192
            G+I  A  L   M   G +   ++Y  +++G CK  +   AL+L R+M     I P VV
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ +   L +  +   A  LF EMQ   +  D  TYN+ I G C +G   +A +L + +
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K   D+  YN LI+   K G+   A EL+  +  R ++ + +TY+ MI G C   ++
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  +F  M     +PN+I F TLI G+    +    +ELLH+M E  ++ D +  + +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 373 V 373
           +
Sbjct: 437 I 437



 Score =  160 bits (405), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 158/319 (49%), Gaps = 1/319 (0%)

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
           L  G        +A  LF +M+     PSVV F  +M  + +  + D    L   M ++ 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           +R + ++++ L+  FC   K+  A   FG +  +G   D V++  L++G C    V EAL
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
             + +M     +P VVT+ TL  GL    ++  A+ L + M  D +     TY T +DG+
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 237 CKNGYIVEAVELFRTL-GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           CK G  V A+ L R +  +     ++  Y+ +ID LCK GR   A  LF  +  + +  D
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           + TYN MI G C+ G+   A  L  +M E  ++P+V+ +  LI+ FV+  K  +  EL  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 356 KMKEKKVMPDASIVSMVVD 374
           +M  + ++P+    S ++D
Sbjct: 350 EMLPRGIIPNTITYSSMID 368



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 132/252 (52%), Gaps = 11/252 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN +T+NT+IDG C    +D    L  +M    +  D  TYN+LIHG     D N A 
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-----------VRPN 120
            L  EM+  G+ P +VT + ++D LC NGK+ +A  +  +M +             V P+
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPD 510

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY+ L+ G    GK   AEEL+  M   G   D ++Y+ +I+G CK   ++EA  ++ 
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            M SK   P VVT+ TL  G  +  +V+  L+LF EM R  + A+  TY T I G  K G
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630

Query: 241 YIVEAVELFRTL 252
            I  A+++F+ +
Sbjct: 631 NINGALDIFQEM 642



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 168/344 (48%), Gaps = 1/344 (0%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           ++ A  LF  M      P VV +  L+  +      +    L+ +M  + ++  + +FN+
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           ++   C   K+  A      + +  + P+  T++TL+ G C+  +++ A + F  M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
           C+ + V++  L+NG C+   + EA++L   M+  G++PT +TY T+  G+ +      AL
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 212 KLFEEMQR-DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
            L  +M+    +  +   Y+  ID LCK+G   +A  LF  +       D+  YN +I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
            C SGR   A +L + +  R +  DVVTYN +I+    +G+  +A +L+ +M    + PN
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            I + ++I GF + N+      + + M  K   P+    + ++D
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 109/216 (50%), Gaps = 1/216 (0%)

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L +G+ + K +E+A+ L+ +M+     P+VV +  L   +  + + +  + L+++M+R  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           +  D  ++N  I   C    +  A+  F  +  L    D+  +  L+ GLC   R+  AL
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           + F  +       +VVT+  +++GLC +G++ +A  L   M E+ + P  I + T++ G 
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 342 VRINKPSKVIELLHKMKE-KKVMPDASIVSMVVDLL 376
            +       + LL KM+E   ++P+  I S ++D L
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL 265


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  275 bits (703), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 134/364 (36%), Positives = 213/364 (58%), Gaps = 11/364 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y+ IID LCK+G    A+ LF +M+ + I PD+ TYNS+I G C +  W++A++L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+++ + P VVT+N +++   K GK  EA  L D M+ R + PN  TYS+++DGFC 
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +++ AE +F  M + GC  + +++N LI+GYC  K +++ + L  EM   G+     T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G + +  +  AL L +EM    +  D  T +T +DGLC NG + +A+E+F+ + 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 254 ILKCEL-----------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
             K +L           D+Q YN LI GL   G+   A EL+  +P R +V D +TY+ M
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I GLC   ++D+A  +F  M   + +PNV+ F TLI+G+ +  +    +EL  +M  + +
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 363 MPDA 366
           + +A
Sbjct: 613 VANA 616



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 208/376 (55%), Gaps = 16/376 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN---PDVVTYNSLIHGLCHANDWNE 69
           +P  +TY TI+DG+CK G  D   AL L  K E I+   P+VV Y+++I  LC     ++
Sbjct: 216 QPTQITYGTIVDGMCKIG--DTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSD 273

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+ LF EM ++G+ P + T+N ++   C +G+  +A +LL  M++R + P+  TY+ L++
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            F   GK   AEEL+  M   G   + ++Y+ +I+G+CK   ++ A  ++  M +KG  P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            ++T+NTL  G     +++  ++L  EM    + ADT+TYNT I G    G +  A++L 
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR-----------SLPRRVLVADVVT 298
           + +       DI   + L+DGLC +G+L+ ALE+F+           S P   +  DV T
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           YNI+I GL N+G+  +A +L+ +M    + P+ I + ++I G  + ++  +  ++   M 
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573

Query: 359 EKKVMPDASIVSMVVD 374
            K   P+    + +++
Sbjct: 574 SKSFSPNVVTFTTLIN 589



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 116/357 (32%), Positives = 197/357 (55%), Gaps = 11/357 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ VTYN +I+   KEG   +A+ L+ +M    I P+ +TY+S+I G C  N  + A+ 
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F+ M  +G  P+++TFN ++D  C   ++D+   LL  M +  +  +  TY+TL+ GF 
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK------- 185
           L G +N A +L   M S G   D V+ + L++G C N ++++AL +++ M          
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501

Query: 186 ----GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
               G++P V TYN L  GL    +   A +L+EEM    +  DT TY++ IDGLCK   
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           + EA ++F ++G      ++  +  LI+G CK+GR++  LELF  + RR +VA+ +TY  
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           +I G    G ++ A D+F +M  + V P+ I    ++ G     +  + + +L K++
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/355 (34%), Positives = 188/355 (52%), Gaps = 1/355 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+NT++ GLC E  V +A  LF QM      P+VVT+ +L++GLC      EA  L
Sbjct: 147 PDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVAL 206

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ-RDVRPNAFTYSTLMDGFC 132
              MM+ G+QP+ +T+  I+D +CK G    A  LL  M +   + PN   YS ++D  C
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLC 266

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+ + A+ LF  M+  G   D  +YN +I G+C +    +A  L +EM+ + I P VV
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L     +  +   A +L++EM    +  +T TY++ IDG CK   +  A  +F  +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  ++  +N LIDG C + R++  +EL   +    LVAD  TYN +IHG    G +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           + A DL  +M  + + P+++   TL+ G     K    +E+   M++ K   DAS
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 192/363 (52%), Gaps = 7/363 (1%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++  +I   C    +  A + F ++    ++PDVVT+N+L+HGLC  +  +EA  LF +M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
            +   +P+VVTF  +M+ LC+ G++ EA  LLD M++  ++P   TY T++DG C  G  
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDT 235

Query: 138 NRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
             A +L   ME +     + V Y+ +I+  CK+    +A +L+ EM  KGI P + TYN+
Sbjct: 236 VSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---G 253
           + +G     +   A +L +EM    ++ D  TYN  I+   K G   EA EL+  +   G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           I+    +   Y+ +IDG CK  RL+ A  +F  +  +    +++T+N +I G C   ++D
Sbjct: 356 IIP---NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
              +L  +M E  +  +   + TLIHGF  +   +  ++LL +M    + PD      ++
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 374 DLL 376
           D L
Sbjct: 473 DGL 475



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 179/361 (49%), Gaps = 1/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +  ++  + +    D   +L+ +M+ + I  D+ ++  LI   C  +    A   
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F ++   G+ P VVTFN ++  LC   ++ EA  L   M +   RPN  T++TLM+G C 
Sbjct: 137 FGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIKPTVV 192
            G+I  A  L   M   G +   ++Y  +++G CK  +   AL L R+M     I P VV
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVV 256

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ +   L +  +   A  LF EMQ   +  D  TYN+ I G C +G   +A +L + +
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K   D+  YN LI+   K G+   A EL+  +  R ++ + +TY+ MI G C   ++
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  +F  M     +PN+I F TLI G+    +    +ELLH+M E  ++ D +  + +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 373 V 373
           +
Sbjct: 437 I 437



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 162/319 (50%), Gaps = 1/319 (0%)

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
           L  G        +A  LF +M+     PSVV F  +M  + +  + D    L   M ++ 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           +R + ++++ L+  FC   K+  A   FG +  +G   D V++N L++G C    V EAL
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           +L+ +M     +P VVT+ TL  GL    ++  A+ L + M  D +     TY T +DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 237 CKNGYIVEAVELFRTL-GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           CK G  V A++L R +  I     ++  Y+ +ID LCK GR   A  LF  +  + +  D
Sbjct: 230 CKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           + TYN MI G C+ G+   A  L  +M E  ++P+V+ +  LI+ FV+  K  +  EL  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 356 KMKEKKVMPDASIVSMVVD 374
           +M  + ++P+    S ++D
Sbjct: 350 EMLPRGIIPNTITYSSMID 368



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 132/252 (52%), Gaps = 11/252 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN +T+NT+IDG C    +D    L  +M    +  D  TYN+LIHG     D N A 
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-----------VRPN 120
            L  EM+  G+ P +VT + ++D LC NGK+ +A  +  +M +             V P+
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPD 510

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY+ L+ G    GK   AEEL+  M   G   D ++Y+ +I+G CK   ++EA  ++ 
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            M SK   P VVT+ TL  G  +  +V+  L+LF EM R  + A+  TY T I G  K G
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630

Query: 241 YIVEAVELFRTL 252
            I  A+++F+ +
Sbjct: 631 NINGALDIFQEM 642



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 168/344 (48%), Gaps = 1/344 (0%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           ++ A  LF  M      P VV +  L+  +      +    L+ +M  + ++  + +F +
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           ++   C   K+  A      + +  + P+  T++TL+ G C+  +++ A  LF  M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
           C+ + V++  L+NG C+   + EA++L   M+  G++PT +TY T+  G+ +I     AL
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239

Query: 212 KLFEEMQR-DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
            L  +M+    +  +   Y+  ID LCK+G   +A  LF  +       D+  YN +I G
Sbjct: 240 DLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
            C SGR   A +L + +  R +  DVVTYN +I+    +G+  +A +L+ +M    + PN
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            I + ++I GF + N+      + + M  K   P+    + ++D
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 111/216 (51%), Gaps = 1/216 (0%)

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L +G+ + K +E+A+ L+ +M+     P+VV +  L   +  + + +  + L+++M+R  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           +  D  ++   I   C    +  A+  F  +  L    D+  +N L+ GLC   R+  AL
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            LF  +       +VVT+  +++GLC +G++ +A  L   M E+ + P  I + T++ G 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 342 VRINKPSKVIELLHKMKE-KKVMPDASIVSMVVDLL 376
            +I      ++LL KM+E   ++P+  I S ++D L
Sbjct: 230 CKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSL 265


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  275 bits (703), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 138/354 (38%), Positives = 210/354 (59%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN VTY+T+ID LC++  V++A  +F  MK + I+PD+ TY SLI GLC  + W EA 
Sbjct: 229 CQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEAS 288

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM    + P +VTFNV++D  CK GK+ EA  +L  M +  V PN  TYS+LM G+
Sbjct: 289 ALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGY 348

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            L   +  A +LF  M + GCK +  SYNILINGYCK K ++EA+ L+ EM+ +G+ P  
Sbjct: 349 SLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNN 408

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+YNTL  G  ++ ++  A  LF  M  +    D  TY+  +DG CK GY+ +A  LFR 
Sbjct: 409 VSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRA 468

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + ++  Y  L+  +CKSG  + A +LF  L  + L   V  Y  +I+GLC +G 
Sbjct: 469 MQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGL 528

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +D+A + F +ME +   P+ I +  +I G ++    S+ + L+ +M+++  + D
Sbjct: 529 LDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIAD 582



 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 197/364 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VT+ T+I+GLCK G   +A  LF  M  +   PDV TYN++I+GLC   +   A  
Sbjct: 160 QPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAG 219

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M + G QP++VT++ ++D LC++  ++EA  +   M  + + P+ FTY++L+ G C
Sbjct: 220 LLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLC 279

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +   A  L   M S+    D V++N+L++ +CK  +V EAL + + M   G++P VV
Sbjct: 280 KFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVV 339

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY++L  G      V  A KLF  M       +  +YN  I+G CK   I EA++LF  +
Sbjct: 340 TYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEM 399

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +  +YN LI G C+ G+L  A +LFR++     + D+ TY+I++ G C  G +
Sbjct: 400 IHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYL 459

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            KA  LF  M+   + PN++++  L+H   +        +L  ++  + + P   + + +
Sbjct: 460 GKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTI 519

Query: 373 VDLL 376
           ++ L
Sbjct: 520 INGL 523



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 194/360 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T +  ++  C+   VD   ++  ++    + P +VT+ +LI+GLC   ++ +A  L
Sbjct: 126 PNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVEL 185

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+ +G QP V T+N I++ LCK G+   A+ LL  M +   +PN  TYSTL+D  C 
Sbjct: 186 FDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCR 245

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +N A ++F  M++ G   D  +Y  LI G CK    +EA +L  EM S  I P +VT
Sbjct: 246 DRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVT 305

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L     +  +V  AL + + M    V  +  TY++ + G      +VEA +LF  + 
Sbjct: 306 FNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMI 365

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C+ +I +YN LI+G CK+ R++ A++LF  +  + L  + V+YN +IHG C  G++ 
Sbjct: 366 TKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLR 425

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A DLF +M  N   P++  +  L+ GF +     K   L   M+   + P+  + +++V
Sbjct: 426 EAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILV 485



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 100/283 (35%), Positives = 163/283 (57%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+N ++D  CKEG V +A  +   M    + P+VVTY+SL++G     D  EA++L
Sbjct: 301 PDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKL 360

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+ +G +P++ ++N++++  CK  ++DEA +L + M+ + + PN  +Y+TL+ GFC 
Sbjct: 361 FHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQ 420

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A++LF +M + G   D  +Y+IL++G+CK   + +A  L+R M S  +KP +V 
Sbjct: 421 LGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVM 480

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L   + +    + A KLF E+    +      Y T I+GLCK G + EA+E FR + 
Sbjct: 481 YTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNME 540

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
              C  D  +YN +I GL +      AL L   +  R  +ADV
Sbjct: 541 ADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 78/175 (44%), Gaps = 1/175 (0%)

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG-YIVEAVELFRTLGILKCELDI 261
               ++ AL  F  M           +   +  + K G Y    + L + + ++    +I
Sbjct: 69  SFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNI 128

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
              +  ++  C+  R+++   +   + +  L   +VT+  +I+GLC  G+  +A +LF D
Sbjct: 129 YTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDD 188

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           M      P+V  + T+I+G  +I + +    LL KM+E    P+    S ++D L
Sbjct: 189 MVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSL 243


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  274 bits (700), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 135/365 (36%), Positives = 217/365 (59%), Gaps = 11/365 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V Y+ IIDGL K+G    A+ LF +M+ + I+P++ TYN +I+G C +  W+EA+R
Sbjct: 245 KPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQR 304

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM ++ + P VVTF+V+++ L K GK  EA  L + M+ R + PN  TY++++DGF 
Sbjct: 305 LLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFS 364

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +++ AE +F  M + GC  D ++++ILI+GYC  K V++ + L  EM  +G+    +
Sbjct: 365 KQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTI 424

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  G  ++  +  AL L +EM    V  +  T NT +DGLC NG + +A+E+F+ +
Sbjct: 425 TYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVM 484

Query: 253 GILKCEL-----------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
              K +L           D+Q YN LI GL   G+   A EL+  +P R LV D +TYN 
Sbjct: 485 QKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNS 544

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +I GLC   ++D+A  +F  M     +P+V+ F TLI+G+ ++ +    +E+  +M  + 
Sbjct: 545 VIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRG 604

Query: 362 VMPDA 366
           ++ +A
Sbjct: 605 IVANA 609



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/376 (32%), Positives = 206/376 (54%), Gaps = 16/376 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE---NINPDVVTYNSLIHGLCHANDWNE 69
           +PN +TY TI+DG+CK G  D   AL L  K E    I P+VV Y+++I GL       +
Sbjct: 209 QPNQITYGTIVDGMCKMG--DTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTD 266

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+ LF EM ++G+ P++ T+N +++  C +G+  EA RLL  M +R + P+  T+S L++
Sbjct: 267 AQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLIN 326

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
                GK   AEEL+  M   G   + ++YN +I+G+ K   ++ A  ++  M +KG  P
Sbjct: 327 ALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSP 386

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V+T++ L  G     +V+  +KL  EM R  + A+T TY T I G C+ G +  A++L 
Sbjct: 387 DVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLL 446

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR-----------SLPRRVLVADVVT 298
           + +       ++   N L+DGLC +G+L+ ALE+F+           S P   +  DV T
Sbjct: 447 QEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQT 506

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           YNI+I GL N+G+  +A +L+ +M    + P+ I + ++I G  + ++  +  ++   M 
Sbjct: 507 YNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMG 566

Query: 359 EKKVMPDASIVSMVVD 374
            K   PD    + +++
Sbjct: 567 SKGFSPDVVTFTTLIN 582



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/355 (33%), Positives = 189/355 (53%), Gaps = 5/355 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT++T++ GLC E  V +A   F Q+      P+V+ + +L++GLC      EA  L
Sbjct: 144 PSLVTFSTLLHGLCVEDRVSEALHFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVAL 199

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ-RDVRPNAFTYSTLMDGFC 132
              M++ G+QP+ +T+  I+D +CK G    A  LL  M +   ++PN   YS ++DG  
Sbjct: 200 LDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLW 259

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+   A+ LF  M+  G   +  +YN +ING+C +    EA  L REM  + + P VV
Sbjct: 260 KDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVV 319

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++ L   L +  +   A +L+ EM    +  +T TYN+ IDG  K   +  A  +F  +
Sbjct: 320 TFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLM 379

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D+  ++ LIDG C + R++  ++L   + RR LVA+ +TY  +IHG C  G +
Sbjct: 380 ATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNL 439

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           + A DL  +M  + V PNV+   TL+ G     K    +E+   M++ K+  DAS
Sbjct: 440 NAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDAS 494



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 188/366 (51%), Gaps = 11/366 (3%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  ++  +I   C    +  A + F ++     +P +VT+++L+HGLC  +  +EA   F
Sbjct: 110 NIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFF 169

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            ++     +P+V+ F  +M+ LC+ G++ EA  LLD MV+  ++PN  TY T++DG C  
Sbjct: 170 HQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 225

Query: 135 GKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           G    A  L   ME +   K + V Y+ +I+G  K+    +A +L+ EM  KGI P + T
Sbjct: 226 GDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFT 285

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           YN +  G     +   A +L  EM    ++ D  T++  I+ L K G   EA EL+  + 
Sbjct: 286 YNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEML 345

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             GI+    +   YN +IDG  K  RL+ A  +F  +  +    DV+T++I+I G C   
Sbjct: 346 PRGIIP---NTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAK 402

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++D    L  +M    +  N I + TLIHGF ++   +  ++LL +M    V P+    +
Sbjct: 403 RVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCN 462

Query: 371 MVVDLL 376
            ++D L
Sbjct: 463 TLLDGL 468



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 90/252 (35%), Positives = 137/252 (54%), Gaps = 11/252 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +T++ +IDG C    VD    L  +M    +  + +TY +LIHG C   + N A 
Sbjct: 384 CSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAAL 443

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR-----------DVRPN 120
            L  EM+  GV P+VVT N ++D LC NGK+ +A  +  +M +            DV P+
Sbjct: 444 DLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPD 503

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY+ L+ G    GK + AEEL+  M   G   D ++YN +I+G CK   ++EA  ++ 
Sbjct: 504 VQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFD 563

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            M SKG  P VVT+ TL  G  ++ +V   L++F EM R  + A+  TY T I G C+ G
Sbjct: 564 SMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVG 623

Query: 241 YIVEAVELFRTL 252
            I  A+++F+ +
Sbjct: 624 NINGALDIFQEM 635



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 168/344 (48%), Gaps = 5/344 (1%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D A  LF  M      P V+ +  L+  +      +    L  +M  + +  ++ +F +
Sbjct: 57  LDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTI 116

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           ++   C   K+  A      + +    P+  T+STL+ G C+  +++ A   F  +    
Sbjct: 117 LIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI---- 172

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
           CK + +++  L+NG C+   V EA++L   MV  G++P  +TY T+  G+ ++     AL
Sbjct: 173 CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 232

Query: 212 KLFEEMQR-DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
            L  +M+    +  +   Y+  IDGL K+G   +A  LF  +       ++  YNC+I+G
Sbjct: 233 NLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMING 292

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
            C SGR   A  L R +  R +  DVVT++++I+ L  +G+  +A +L+ +M    + PN
Sbjct: 293 FCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPN 352

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            I + ++I GF + N+      + + M  K   PD    S+++D
Sbjct: 353 TITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILID 396



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 124/213 (58%), Gaps = 12/213 (5%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-----------NINPDVVTYNSLIH 59
           VC PN VT NT++DGLC  G +  A  +F  M+             ++ PDV TYN LI 
Sbjct: 454 VC-PNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILIC 512

Query: 60  GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
           GL +   ++EA+ L+ EM  +G+ P  +T+N ++D LCK  ++DEA+++ D M  +   P
Sbjct: 513 GLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSP 572

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           +  T++TL++G+C  G++    E+F  M   G   + ++Y  LI+G+C+   +  AL ++
Sbjct: 573 DVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIF 632

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
           +EM+S G+ P  +T   +  GL+   +++ A++
Sbjct: 633 QEMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 139/276 (50%), Gaps = 5/276 (1%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D+A  L   MV+    P    +  L+       + +    L   ME      +  S+ I
Sbjct: 57  LDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTI 116

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LI  +C   ++  ALS + ++   G  P++VT++TL  GL    +V  AL  F ++ + +
Sbjct: 117 LIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPN 176

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           V A    + T ++GLC+ G +VEAV L   +     + +   Y  ++DG+CK G    AL
Sbjct: 177 VIA----FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 232

Query: 282 ELFRSLPRRVLV-ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            L R +     +  +VV Y+ +I GL  DG+   A +LF +M+E  ++PN+  +  +I+G
Sbjct: 233 NLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMING 292

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           F    + S+   LL +M E+K+ PD    S++++ L
Sbjct: 293 FCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINAL 328


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  274 bits (700), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 148/363 (40%), Positives = 218/363 (60%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVTY T+I  LCK G V+ A   F QM  E ++P  + YNSLIH LC  + W++AK L
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+D+G+    + FN I+D  CK G++ E+ +L DLMV+  V+PN  TYSTL+DG+CL
Sbjct: 467 ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCL 526

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A +L  SM S+G K D V+YN LINGYCK   +E+AL L+REM S G+ P ++T
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GLF+  +   A +L+  +       + STYN  + GLCKN    EA+ +F+ L 
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   +L+ + +N +I  L K GR + A +LF +L    LV DV TY++M   L   G ++
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLE 706

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +  DLFL MEEN    N  +  +++   ++    ++    L  + EK    +AS  S+ +
Sbjct: 707 ELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFL 766

Query: 374 DLL 376
           DLL
Sbjct: 767 DLL 769



 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 199/395 (50%), Gaps = 35/395 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTYN+II  LCK   +DKA  +   M    + P+  TYNS++HG C +    EA   
Sbjct: 232 PNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   GV+P VVT+N +MD LCKNG+  EA ++ D M +R ++P   TY TL+ G+  
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 134 -----------------------------------TGKINRAEELFGSMESMGCKHDDVS 158
                                               GK+++A  +F  M   G   D V+
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y  +I   CK+  VE+A+  + +M+ + + P  + YN+L   L    + + A +L  EM 
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  DT  +N+ ID  CK G ++E+ +LF  +  +  + +I  Y+ LIDG C +G+++
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMD 531

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +L  S+    +  D VTYN +I+G C   +M+ A  LF +ME + V+P++I +  ++
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            G  +  + +   EL   + E     + S  ++++
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 199/360 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   ++ +I    K+G VD+A  +F +M+ + +NPD VTY ++I  LC +    +A R 
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+D+ + P  + +N ++  LC   K D+A  L+  M+ R +  +   +++++D  C 
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  +E+LF  M  +G K + ++Y+ LI+GYC   +++EA  L   MVS G+KP  VT
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G  +I ++E AL LF EM+   V+ D  TYN  + GL +      A EL+  + 
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +L++  YN ++ GLCK+   + AL +F++L    L  +  T+NIMI  L   G+ D
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A DLF  +  N + P+V  +  +    +      ++ +L   M+E     ++ +++ +V
Sbjct: 672 EAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 204/429 (47%), Gaps = 78/429 (18%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMK--GENINPDVVTYNSLIHGLCHANDWNE 69
           C PN  +YN ++ GLC E    +A  L   M   G +  PDVV+Y ++I+G     D ++
Sbjct: 158 CIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDK 217

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A   + EM+D+G+ P+VVT+N I+  LCK   MD+A  +L  MV+  V PN  TY++++ 
Sbjct: 218 AYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVH 277

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+C +G+   A      M S G + D V+YN L++  CKN    EA  ++  M  +G+KP
Sbjct: 278 GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP 337

Query: 190 TVVTYNTLFLG------LFEIH-----------------------------QVEHALKLF 214
            + TY TL  G      L E+H                             +V+ A+ +F
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---------------------- 252
            +M++  +  DT TY T I  LCK+G + +A+  F  +                      
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457

Query: 253 ----------------GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
                           GI    LD   +N +ID  CK GR+  + +LF  + R  +  ++
Sbjct: 458 DKWDKAKELILEMLDRGIC---LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNI 514

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           +TY+ +I G C  G+MD+A  L   M    + P+ + + TLI+G+ +I++    + L  +
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574

Query: 357 MKEKKVMPD 365
           M+   V PD
Sbjct: 575 MESSGVSPD 583



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 167/336 (49%), Gaps = 3/336 (0%)

Query: 44  GENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMD 103
            + + P++ TY  LI   C A   +        ++ +G +   + F  ++  LC + +  
Sbjct: 84  ADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS 143

Query: 104 EASRL-LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG--CKHDDVSYN 160
           +A  + L  M Q    PN F+Y+ L+ G C   +   A EL   M   G  C  D VSY 
Sbjct: 144 DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYT 203

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            +ING+ K  ++++A   Y EM+ +GI P VVTYN++   L +   ++ A+++   M ++
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKN 263

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            V  +  TYN+ + G C +G   EA+   + +     E D+  YN L+D LCK+GR   A
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            ++F S+ +R L  ++ TY  ++ G    G + + H L   M  N + PN  +F  LI  
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + +  K  + + +  KM+++ + PD      V+ +L
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL 419



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 185/399 (46%), Gaps = 38/399 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY  +I   C  G +D   A    +  +    D + +  L+ GLC     ++A  +
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR--DVRPNAFTYSTLMDG 130
               M Q G  P+V ++N+++  LC   +  EA  LL +M     D  P+  +Y+T+++G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           F   G +++A   +  M   G   + V+YN +I   CK + +++A+ +   MV  G+ P 
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             TYN++  G     Q + A+   ++M  D V  D  TYN+ +D LCKNG   EA ++F 
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 251 TLGILKCELDIQAYNCLIDG--------------------------------LC---KSG 275
           ++     + +I  Y  L+ G                                +C   K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           +++ A+ +F  + ++ L  D VTY  +I  LC  G+++ A   F  M +  ++P  I++ 
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +LIH     +K  K  EL+ +M ++ +  D    + ++D
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 119/239 (49%), Gaps = 2/239 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            IGV  KPN +TY+T+IDG C  G +D+A  L   M    + PD VTYN+LI+G C  + 
Sbjct: 507 RIGV--KPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A  LF EM   GV P ++T+N+I+  L +  +   A  L   + +   +    TY+ 
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ G C     + A  +F ++     + +  ++NI+I    K    +EA  L+  + + G
Sbjct: 625 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANG 684

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           + P V TY+ +   L E   +E    LF  M+ +   A++   N+ +  L + G I  A
Sbjct: 685 LVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 114/234 (48%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V  KP+ VTYNT+I+G CK   ++ A  LF +M+   ++PD++TYN ++ GL      
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             AK L+  + + G Q  + T+N+I+  LCKN   DEA R+   +   D++    T++ +
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +      G+ + A++LF ++ + G   D  +Y+++     +   +EE   L+  M   G 
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
                  N++   L +   +  A      +     + + ST + F+D L    Y
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGGKY 774


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  273 bits (698), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 144/367 (39%), Positives = 220/367 (59%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + K N V YNTIID LCK   V  A  L+ QM  + I+PDVVT+++LI+G C      
Sbjct: 201 GKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLE 260

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  LF EM+ + + P   TFN+++D LCK G +  A  +L +M++  V PN  TYS+LM
Sbjct: 261 EAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLM 320

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+CL  ++N+A+ +  ++  MG   +  SY  +ING+CK K V+EALSL+ +M  KGI 
Sbjct: 321 DGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIA 380

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  VTYN+L  GL +  ++ +A +L +EM  +   A+  TYN  ID LCKN ++ +A+ L
Sbjct: 381 PDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIAL 440

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            + +     + D+  +N LI GLCK GRL+ A ++F+ L  +    +  TYNIM++GLC 
Sbjct: 441 VKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCK 500

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           +G  D+A  L   M++N + P+ + + TLI      ++  K  +LL +M  + V+     
Sbjct: 501 EGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVVYALEG 560

Query: 369 VSMVVDL 375
           + MV+ L
Sbjct: 561 LEMVLHL 567



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 194/359 (54%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           +Y T+I+GLCK G    A  +  ++ G+ +  +VV YN++I  LC      +A  L+ +M
Sbjct: 175 SYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQM 234

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           + + + P VVTF+ ++   C  G+++EA  L   MV +++ P+ +T++ L+D  C  G +
Sbjct: 235 IAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNL 294

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A+ +   M   G   + V+Y+ L++GYC   +V +A  +   +   G  P   +Y T+
Sbjct: 295 KGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTM 354

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G  +I  V+ AL LF +MQ   +A D  TYN+ IDGLCK+G I  A EL   +     
Sbjct: 355 INGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQ 414

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             +I  YNCLID LCK+  ++ A+ L + +  + +  D+ T+NI+I+GLC  G++  A D
Sbjct: 415 PANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQD 474

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +F D+     + N   +  +++G  +     +   LL KM +  ++PDA     ++  L
Sbjct: 475 VFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQAL 533



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 191/362 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+T+T+NT+I GLC  G V +A      +     + D  +Y +LI+GLC   +   A +
Sbjct: 135 EPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQ 194

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  ++  + V+ +VV +N I+D LCK+  + +A  L   M+ + + P+  T+S L+ GFC
Sbjct: 195 MLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFC 254

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + G++  A  LF  M       D  ++NIL++  CK   ++ A ++   M+ +G+ P VV
Sbjct: 255 IVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVV 314

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY++L  G   ++QV  A  +   + +   A +  +Y T I+G CK   + EA+ LF  +
Sbjct: 315 TYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDM 374

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D   YN LIDGLCKSGR+  A EL   +      A++ TYN +I  LC +  +
Sbjct: 375 QFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHV 434

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A  L   +++  + P++  F  LI+G  ++ +     ++   +  K    +A   +++
Sbjct: 435 DQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIM 494

Query: 373 VD 374
           V+
Sbjct: 495 VN 496



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 173/345 (50%), Gaps = 2/345 (0%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND--WNEAKRLFFEMMDQGVQPSVVTF 89
           VD   + F  +        ++ +N ++  L  +N+  +  A  L   +   G+ P + TF
Sbjct: 47  VDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTF 106

Query: 90  NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
           N++++  C   +M+ A  ++  +++    P+  T++TL+ G CL GK+  A      + +
Sbjct: 107 NILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLA 166

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
           +G   D  SY  LING CK  E   AL + R++  K +K  VV YNT+   L +   V  
Sbjct: 167 LGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVID 226

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           A +L+ +M    ++ D  T++  I G C  G + EA  LFR + +     D   +N L+D
Sbjct: 227 AYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVD 286

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
            LCK G L+ A  +   + +  ++ +VVTY+ ++ G C   Q++KA  +   + +   AP
Sbjct: 287 ALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAP 346

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           N   + T+I+GF +I    + + L + M+ K + PD    + ++D
Sbjct: 347 NAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLID 391



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 106/208 (50%)

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
           N     A+SL R +   GI P + T+N L      + ++  A  +  ++ +     DT T
Sbjct: 81  NNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTIT 140

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           +NT I GLC NG + EA+     +  L   LD  +Y  LI+GLCK G    AL++ R + 
Sbjct: 141 FNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKID 200

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
            +++  +VV YN +I  LC    +  A++L+  M    ++P+V+ F  LI+GF  + +  
Sbjct: 201 GKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLE 260

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +   L  +M  K + PD    +++VD L
Sbjct: 261 EAFGLFREMVLKNINPDYYTFNILVDAL 288


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 136/366 (37%), Positives = 215/366 (58%), Gaps = 11/366 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y+ IID LCK+G    A+ LF +M+ + I PD+ TYNS+I G C +  W++A++L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+++ + P VVT+N +++   K GK  EA+ L D M+ R + PN  TY++++DGFC 
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 372

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +++ AE++F  M + GC  D  ++  LI+GYC  K +++ + L  EM  +G+    VT
Sbjct: 373 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 432

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G   +  +  AL L ++M    V  D  T NT +DGLC NG + +A+E+F+ + 
Sbjct: 433 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 492

Query: 254 ILKCEL-----------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
             K +L           D+  YN LI GL   G+   A EL+  +P R +V D +TY+ M
Sbjct: 493 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I GLC   ++D+A  +F+ M   + +PNV+ F TLI+G+ +  +    +EL  +M  + +
Sbjct: 553 IDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 363 MPDASI 368
           + DA I
Sbjct: 613 VADAII 618



 Score =  227 bits (578), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 121/357 (33%), Positives = 197/357 (55%), Gaps = 11/357 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ VTYN +I+   KEG   +A  L+ +M    I P+ +TYNS+I G C  +  + A+ 
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAED 381

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F+ M  +G  P V TF  ++D  C   ++D+   LL  M +R +  N  TY+TL+ GFC
Sbjct: 382 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 441

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK------- 185
           L G +N A +L   M S G   D V+ N L++G C N ++++AL +++ M          
Sbjct: 442 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 501

Query: 186 ----GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
               G++P V+TYN L  GL    +   A +L+EEM    +  DT TY++ IDGLCK   
Sbjct: 502 HPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           + EA ++F ++G      ++  +N LI+G CK+GR++  LELF  + RR +VAD + Y  
Sbjct: 562 LDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT 621

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           +I+G    G ++ A D+F +M  + V P+ I    ++ GF    +  + + +L  ++
Sbjct: 622 LIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 195/386 (50%), Gaps = 36/386 (9%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++N +I   C    +  A + F ++    ++PDVVT+ +L+HGLC  +  +EA   F +M
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM 175

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG------- 130
            +   +P+VVTF  +M+ LC+ G++ EA  LLD M++  ++P   TY T++DG       
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235

Query: 131 -----------------------------FCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
                                         C  G+ + A+ LF  M+  G   D  +YN 
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           +I G+C +    +A  L +EM+ + I P VVTYN L     +  +   A +L++EM    
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRG 355

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           +  +T TYN+ IDG CK   +  A ++F  +    C  D+  +  LIDG C + R++  +
Sbjct: 356 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGM 415

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           EL   +PRR LVA+ VTYN +IHG C  G ++ A DL   M  + V P+++   TL+ G 
Sbjct: 416 ELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 475

Query: 342 VRINKPSKVIELLHKMKEKKVMPDAS 367
               K    +E+   M++ K+  DAS
Sbjct: 476 CDNGKLKDALEMFKAMQKSKMDLDAS 501



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 175/354 (49%), Gaps = 1/354 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +  ++  + +    D   +L+ +M+ + I  D+ ++N LI   C  +    A   
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F ++   G+ P VVTF  ++  LC   ++ EA      M +   RPN  T++TLM+G C 
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIKPTVV 192
            G+I  A  L   M   G +   ++Y  +++G CK  +   AL+L R+M     I P VV
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ +   L +  +   A  LF EMQ   +  D  TYN+ I G C +G   +A +L + +
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K   D+  YN LI+   K G+   A EL+  +  R ++ + +TYN MI G C   ++
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 376

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           D A D+F  M     +P+V  F TLI G+    +    +ELLH+M  + ++ + 
Sbjct: 377 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 430



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 151/324 (46%), Gaps = 46/324 (14%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDV---------------------- 51
           PNT+TYN++IDG CK+  +D A+ +F  M  +  +PDV                      
Sbjct: 358 PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 417

Query: 52  -------------VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                        VTYN+LIHG C   D N A  L  +M+  GV P +VT N ++D LC 
Sbjct: 418 LHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCD 477

Query: 99  NGKMDEASRLLDLMVQRD-----------VRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
           NGK+ +A  +   M +             V P+  TY+ L+ G    GK   AEEL+  M
Sbjct: 478 NGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM 537

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
              G   D ++Y+ +I+G CK   ++EA  ++  M SK   P VVT+NTL  G  +  +V
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRV 597

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
           +  L+LF EM R  + AD   Y T I G  K G I  A+++F+ +       D      +
Sbjct: 598 DDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657

Query: 268 IDGLCKSGRLEIALELFRSLPRRV 291
           + G      LE A+ +   L   V
Sbjct: 658 LTGFWSKEELERAVAMLEDLQMSV 681



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 158/319 (49%), Gaps = 1/319 (0%)

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
           L  G        +A  LF +M+     PSVV F  +M  + +  + D    L   M ++ 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           +R + ++++ L+  FC   K+  A   FG +  +G   D V++  L++G C    V EAL
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
             + +M     +P VVT+ TL  GL    ++  A+ L + M  D +     TY T +DG+
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 237 CKNGYIVEAVELFRTL-GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           CK G  V A+ L R +  +     ++  Y+ +ID LCK GR   A  LF  +  + +  D
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           + TYN MI G C+ G+   A  L  +M E  ++P+V+ +  LI+ FV+  K  +  EL  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYD 349

Query: 356 KMKEKKVMPDASIVSMVVD 374
           +M  + ++P+    + ++D
Sbjct: 350 EMLPRGIIPNTITYNSMID 368



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 123/219 (56%), Gaps = 12/219 (5%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-----------NINPDVVTYNSLIH 59
           VC P+ VT NT++DGLC  G +  A  +F  M+              + PDV+TYN LI 
Sbjct: 461 VC-PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 519

Query: 60  GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
           GL +   + EA+ L+ EM  +G+ P  +T++ ++D LCK  ++DEA+++   M  +   P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSP 579

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           N  T++TL++G+C  G+++   ELF  M   G   D + Y  LI G+ K   +  AL ++
Sbjct: 580 NVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIF 639

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +EM+S G+ P  +T   +  G +   ++E A+ + E++Q
Sbjct: 640 QEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 109/216 (50%), Gaps = 1/216 (0%)

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L +G+ + K +E+A+ L+ +M+     P+VV +  L   +  + + +  + L+++M+R  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           +  D  ++N  I   C    +  A+  F  +  L    D+  +  L+ GLC   R+  AL
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           + F  +       +VVT+  +++GLC +G++ +A  L   M E+ + P  I + T++ G 
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 342 VRINKPSKVIELLHKMKE-KKVMPDASIVSMVVDLL 376
            +       + LL KM+E   ++P+  I S ++D L
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL 265


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 141/364 (38%), Positives = 214/364 (58%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ VTY  +ID LCK G VD A   F QM  + + P+ V +NSL++GLC  + W +A+ 
Sbjct: 476 SPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEE 535

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LFFEM DQGV+P+VV FN IM  LC  G++  A RL+D M +  VRPN  +Y+TL+ G C
Sbjct: 536 LFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHC 595

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G+ + A +L   M S+G K D +SY+ L+ GYCK   ++ A  L+REM+ KG+ P  V
Sbjct: 596 LAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAV 655

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+T+  GLF   +   A +L+  M +     D  TYN  ++GLCK   + EA ++F++L
Sbjct: 656 TYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSL 715

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +I  +  +ID L K GR + A++LF S+P   LV +VVTY IM+  +  +G +
Sbjct: 716 CSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLL 775

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+  +LFL ME++   P+ ++   +I   +   +  +    L K+ E     +AS  S++
Sbjct: 776 DEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLL 835

Query: 373 VDLL 376
           + L 
Sbjct: 836 ISLF 839



 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 117/361 (32%), Positives = 194/361 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTYNTIIDGLCK   VD+A  +   M  +++ PD+ TYN LIHG     +W E  R
Sbjct: 301 KPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVR 360

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              EM  +G+ P VVT+++++D LCKNGK  EA ++   M+++ ++PN   Y  L+ G+ 
Sbjct: 361 RLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYA 420

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G I    +L   M + G   ++  +NI++  Y K   ++EA+ ++  M   G+ P VV
Sbjct: 421 ARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVV 480

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L   L ++ +V+ A+  F +M  D V  ++  +N+ + GLC      +A ELF  +
Sbjct: 481 TYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEM 540

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++  +N ++  LC  G++ +A  L  S+ R  +  +V++YN +I G C  G+ 
Sbjct: 541 WDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRT 600

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A  L   M    + P++I + TL+ G+ +  +      L  +M  K V P A   S +
Sbjct: 601 DEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTI 660

Query: 373 V 373
           +
Sbjct: 661 L 661



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 127/392 (32%), Positives = 202/392 (51%), Gaps = 38/392 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMK---GENINPDVVTYNSLIHGLCHANDWN 68
           C PN V+ NT++ GLC E  V++A  L   M    G N  P+VVTYN++I GLC A   +
Sbjct: 157 CMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVD 216

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A+ +   M+D+GV+  VVT++ I+D LCK   +D A  +L  M+ + V+P+  TY+T++
Sbjct: 217 RAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTII 276

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C    ++RAE +   M   G K D V+YN +I+G CK + V+ A  + + M+ K +K
Sbjct: 277 DGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVK 336

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P + TYN L  G     + +  ++  EEM    +  D  TY+  +D LCKNG   EA ++
Sbjct: 337 PDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKI 396

Query: 249 FRTLGILKCELDIQAYNCLIDG--------------------------------LC---K 273
           F  +     + ++  Y  L+ G                                LC   K
Sbjct: 397 FYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAK 456

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
              ++ A+ +F  + +  L  DVVTY I+I  LC  G++D A   F  M  + V PN ++
Sbjct: 457 KAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVV 516

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           F +L++G   +++  K  EL  +M ++ V P+
Sbjct: 517 FNSLVYGLCTVDRWEKAEELFFEMWDQGVRPN 548



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 188/353 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + VTY+TIIDGLCK   VD+A+ +   M  + + PDVVTYN++I GLC A   + A+ 
Sbjct: 231 KLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEG 290

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M+D+GV+P VVT+N I+D LCK   +D A  +L  M+ +DV+P+  TY+ L+ G+ 
Sbjct: 291 VLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYL 350

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            TG+          M + G   D V+Y++L++  CKN +  EA  ++  M+ KGIKP V 
Sbjct: 351 STGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVT 410

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y  L  G      +     L + M  + ++ +   +N  +    K   I EA+ +F  +
Sbjct: 411 IYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRM 470

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D+  Y  LID LCK GR++ A+  F  +    +  + V +N +++GLC   + 
Sbjct: 471 SQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRW 530

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +KA +LF +M +  V PNV+ F T++       +      L+  M+   V P+
Sbjct: 531 EKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPN 583



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 191/368 (51%), Gaps = 4/368 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEAK 71
           + N V  N +++GLC    VD+A  + L+   E    P+VV+ N+L+ GLC+     EA 
Sbjct: 122 RVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEAL 181

Query: 72  RLFFEMMDQG---VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            L   M + G     P+VVT+N I+D LCK   +D A  +L  M+ + V+ +  TYST++
Sbjct: 182 ELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTII 241

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C    ++RAE +   M   G K D V+YN +I+G CK + V+ A  + + M+ KG+K
Sbjct: 242 DGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVK 301

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTYNT+  GL +   V+ A  + + M   DV  D  TYN  I G    G   E V  
Sbjct: 302 PDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRR 361

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +     + D+  Y+ L+D LCK+G+   A ++F  + R+ +  +V  Y I++HG   
Sbjct: 362 LEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAA 421

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G +    DL   M  N ++PN  IF  ++  + +     + + +  +M +  + PD   
Sbjct: 422 RGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVT 481

Query: 369 VSMVVDLL 376
             +++D L
Sbjct: 482 YGILIDAL 489



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 185/381 (48%), Gaps = 42/381 (11%)

Query: 35  AKALFLQMK---GENINPDVVTY-----------------------------------NS 56
           A +LF +M       + PD+ TY                                   N 
Sbjct: 71  AVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQ 130

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           L++GLC A   +EA  +    M + G  P+VV+ N ++  LC   +++EA  LL  M + 
Sbjct: 131 LLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAED 190

Query: 116 ---DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
              +  PN  TY+T++DG C    ++RAE +   M   G K D V+Y+ +I+G CK + V
Sbjct: 191 GGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAV 250

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           + A  + + M+ KG+KP VVTYNT+  GL +   V+ A  + + M    V  D  TYNT 
Sbjct: 251 DRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTI 310

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           IDGLCK   +  A  + + +     + DIQ YNCLI G   +G  +  +     +  R L
Sbjct: 311 IDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGL 370

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
             DVVTY++++  LC +G+  +A  +F  M    + PNV I+  L+HG+      + + +
Sbjct: 371 DPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTD 430

Query: 353 LLHKMKEKKVMPDASIVSMVV 373
           LL  M    + P+  I ++V+
Sbjct: 431 LLDLMVANGISPNNYIFNIVL 451



 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 10/308 (3%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCK---NGKMDEASRLLDLMVQ---RDVRPNA 121
           ++A +LF E++      SV  FN +++ + +   +   + A  L + M +     VRP+ 
Sbjct: 31  DDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDL 90

Query: 122 FTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS-LYR 180
            TYS L   FC  G+I      FG +   G + ++V  N L+NG C  K V+EA+  L R
Sbjct: 91  CTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLR 150

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD---DVAADTSTYNTFIDGLC 237
            M   G  P VV+ NTL  GL    +VE AL+L   M  D   +   +  TYNT IDGLC
Sbjct: 151 RMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLC 210

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           K   +  A  + + +     +LD+  Y+ +IDGLCK+  ++ A  + + +  + +  DVV
Sbjct: 211 KAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVV 270

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           TYN +I GLC    +D+A  +   M +  V P+V+ + T+I G  +     +   +L  M
Sbjct: 271 TYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHM 330

Query: 358 KEKKVMPD 365
            +K V PD
Sbjct: 331 IDKDVKPD 338



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 120/223 (53%), Gaps = 3/223 (1%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V  KP+ ++Y+T++ G CK G +D A  LF +M  + + P  VTY++++ GL H   +
Sbjct: 611 VSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRF 670

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +EAK L+  M+  G Q  + T+N+I++ LCK   +DEA ++   +  +D+RPN  T++ +
Sbjct: 671 SEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIM 730

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D     G+   A +LF S+ S G   + V+Y I++    +   ++E  +L+  M   G 
Sbjct: 731 IDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGC 790

Query: 188 KPTVVTYNTL---FLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
            P  V  N +    LG  EI +    L   +EM     A+ TS
Sbjct: 791 TPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTS 833


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 142/349 (40%), Positives = 217/349 (62%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + KPN   Y+TIID LCK   V +A  LF +M  + I+ DVVTY++LI+G C      
Sbjct: 192 GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLK 251

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  L  EM+ + + P+V T+N+++D LCK GK+ EA  +L +M++  V+P+  TYSTLM
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM 311

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+ L  ++ +A+ +F +M  MG   D  +Y ILING+CKNK V+EAL+L++EM  K + 
Sbjct: 312 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P +VTY++L  GL +  ++ +   L +EM+     AD  TY++ IDGLCKNG++  A+ L
Sbjct: 372 PGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIAL 431

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +   +   +I  +  L+DGLCK GRL+ A E+F+ L  +    +V TYN+MI+G C 
Sbjct: 432 FNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCK 491

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            G +++A  +   ME+N   PN   F T+I    + ++  K  +LL +M
Sbjct: 492 QGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540



 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 118/330 (35%), Positives = 182/330 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVT NT+I GLC +G V KA     ++  +    + V+Y +LI+G+C   D   A +L
Sbjct: 127 PDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKL 186

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++  +  +P+V  ++ I+D LCK   + EA  L   M  + +  +  TYSTL+ GFC+
Sbjct: 187 LRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCI 246

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A  L   M       +  +YNIL++  CK  +V+EA S+   M+   +KP V+T
Sbjct: 247 EGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+TL  G F +++V+ A  +F  M    V  D  TY   I+G CKN  + EA+ LF+ + 
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  I  Y+ LIDGLCKSGR+    +L   +  R   ADV+TY+ +I GLC +G +D
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLD 426

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           +A  LF  M++  + PN+  F  L+ G  +
Sbjct: 427 RAIALFNKMKDQEIRPNIFTFTILLDGLCK 456



 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 194/359 (54%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V+Y T+I+G+CK G    A  L  ++ G    P+V  Y+++I  LC     +EA  LF
Sbjct: 163 NQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLF 222

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM  +G+   VVT++ ++   C  GK+ EA  LL+ MV + + PN +TY+ L+D  C  
Sbjct: 223 SEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKE 282

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK+  A+ +   M     K D ++Y+ L++GY    EV++A  ++  M   G+ P V TY
Sbjct: 283 GKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTY 342

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  G  +   V+ AL LF+EM + ++     TY++ IDGLCK+G I    +L   +  
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRD 402

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D+  Y+ LIDGLCK+G L+ A+ LF  +  + +  ++ T+ I++ GLC  G++  
Sbjct: 403 RGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKD 462

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A ++F D+       NV  +  +I+G  +     + + +L KM++   +P+A     ++
Sbjct: 463 AQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETII 521



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 189/396 (47%), Gaps = 35/396 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  + +N I+D   K      A +L  +++ + I PD++T N LI+  CH         +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++ +G  P  VT N ++  LC  G++ +A    D ++ +  + N  +Y+TL++G C 
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G    A +L   ++    K +   Y+ +I+  CK + V EA  L+ EM  KGI   VVT
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE--------- 244
           Y+TL  G     +++ A+ L  EM    +  +  TYN  +D LCK G + E         
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 245 --------------------------AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                                     A  +F  + ++    D+  Y  LI+G CK+  ++
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            AL LF+ + ++ +V  +VTY+ +I GLC  G++    DL  +M +     +VI + +LI
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLI 416

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            G  +     + I L +KMK++++ P+    ++++D
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLD 452



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 173/343 (50%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           VD A + F +M      P ++ +N ++        ++ A  L   +  +G+QP ++T N+
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C  G++     +L  +++R   P+  T +TL+ G CL G++ +A      + + G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + + VSY  LING CK  +   A+ L R++  +  KP V  Y+T+   L +   V  A 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            LF EM    ++AD  TY+T I G C  G + EA+ L   + +     ++  YN L+D L
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           CK G+++ A  +   + +  +  DV+TY+ ++ G     ++ KA  +F  M    V P+V
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +  LI+GF +     + + L  +M +K ++P     S ++D
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID 382



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 154/280 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN ++D LCKEG V +AK++   M    + PDV+TY++L+ G     +  +A+ +
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   GV P V T+ ++++  CKN  +DEA  L   M Q+++ P   TYS+L+DG C 
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G+I    +L   M   G   D ++Y+ LI+G CKN  ++ A++L+ +M  + I+P + T
Sbjct: 387 SGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFT 446

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  GL +  +++ A ++F+++       +  TYN  I+G CK G + EA+ +   + 
Sbjct: 447 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKME 506

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
              C  +   +  +I  L K    + A +L R +  R L+
Sbjct: 507 DNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 119/240 (49%)

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           ++ A   F  M  M      + +N +++ + K K    A+SL   +  KGI+P ++T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L      + Q+     +  ++ +     DT T NT I GLC  G + +A+     L    
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            +L+  +Y  LI+G+CK G    A++L R +  R+   +V  Y+ +I  LC    + +A+
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            LF +M    ++ +V+ + TLI+GF    K  + I LL++M  K + P+    +++VD L
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 56/103 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  T+  ++DGLCK G +  A+ +F  +  +  + +V TYN +I+G C      EA  
Sbjct: 441 RPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALT 500

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           +  +M D G  P+  TF  I+  L K  + D+A +LL  M+ R
Sbjct: 501 MLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIAR 543


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 139/364 (38%), Positives = 218/364 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PN V Y T+ID LCK G VD A+  F QM  E + P++V + SL++GLC  + W +A  
Sbjct: 411 SPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGE 470

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LFFEM++QG+ P+VV FN IM  LC  G++ +A RL+DLM +   RP+  +Y+ L+ G C
Sbjct: 471 LFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHC 530

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK + A +L   M S+G K ++ +YN L++GYC++  +++A S+++EM+S GI P VV
Sbjct: 531 LVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVV 590

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNT+  GLF+  +   A +L+  M          TYN  ++GL KN  + EA+++F++L
Sbjct: 591 TYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSL 650

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                ++DI  +N +I  L K GR E A+ LF ++    LV DV TY ++   L  +G +
Sbjct: 651 CSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSL 710

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++   +F +ME++  APN ++   L+   +     S+    L K+ EK    +AS  SM+
Sbjct: 711 EEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSML 770

Query: 373 VDLL 376
           + L 
Sbjct: 771 ISLF 774



 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 189/379 (49%), Gaps = 35/379 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  +IDGLCK   VD+A+ +F QM  + + P++VTY  LIHG      W E  R+
Sbjct: 237 PNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRM 296

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G++P   T+ +++D LCK GK  EA +L D M+++ ++P+   Y  ++ G+  
Sbjct: 297 LKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYAT 356

Query: 134 TGK-----------------------------------INRAEELFGSMESMGCKHDDVS 158
            G                                    I  A ++F  M   G   + V+
Sbjct: 357 KGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVN 416

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y  LI+  CK   V++A   + +M+++G+ P +V + +L  GL  I + E A +LF EM 
Sbjct: 417 YATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMV 476

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  +   +NT +  LC  G +++A  L   +  +    DI +YN LI G C  G+ +
Sbjct: 477 NQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTD 536

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +L   +    L  +  TYN ++HG C DG++D A+ +F +M  N + P V+ + T++
Sbjct: 537 EASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTIL 596

Query: 339 HGFVRINKPSKVIELLHKM 357
           HG  +  + S+  EL   M
Sbjct: 597 HGLFKTRRFSEAKELYLNM 615



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 182/360 (50%), Gaps = 9/360 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN---PDVVTYNSLIHGLCHANDWN 68
           C PN V+YNT++ G C E   ++A  L   M    +    P++V+YN++I+G       +
Sbjct: 162 CTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVD 221

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  LF +M DQG+ P+VVT+ +++D LCK   +D A  +   M+ + VRPN  TY+ L+
Sbjct: 222 KAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLI 281

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G+   G+      +   M + G + D  +Y +L++  CK  +  EA  L+  M+ KGIK
Sbjct: 282 HGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIK 341

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P V  Y  +  G      +       + M  + ++ +   +N       K   I EA+++
Sbjct: 342 PDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDI 401

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +       ++  Y  LID LCK GR++ A   F  +    +  ++V +  +++GLC 
Sbjct: 402 FNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCT 461

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV---RINKPSKVIELLHKMKEKKVMPD 365
             + +KA +LF +M    + PNV+ F T++       R+ K  ++I+L+ ++  +   PD
Sbjct: 462 IDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTR---PD 518



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 172/348 (49%), Gaps = 4/348 (1%)

Query: 22  IIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQ 80
           ++ GLC    V +A  + L+   E    P+VV+YN+L+ G C  N   EA  L   M D 
Sbjct: 136 LLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADG 195

Query: 81  GVQ---PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
            V+   P++V++N +++     G++D+A  L   M  + + PN  TY+ ++DG C    +
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVV 255

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           +RAE +F  M   G + + V+Y  LI+GY    + +E + + +EM + G++P   TY  L
Sbjct: 256 DRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLL 315

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
              L +  +   A KLF+ M R  +  D S Y   + G    G + E       +     
Sbjct: 316 LDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGI 375

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             +   +N +     K   +  A+++F  + ++ L  +VV Y  +I  LC  G++D A  
Sbjct: 376 SPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAEL 435

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            F  M    VAPN+++F +L++G   I+K  K  EL  +M  + + P+
Sbjct: 436 KFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPN 483



 Score =  157 bits (397), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 181/397 (45%), Gaps = 35/397 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TY  ++D LCK+G   +A+ LF  M  + I PDV  Y  ++HG       +E   
Sbjct: 306 EPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHS 365

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
               M+  G+ P+   FN++     K   + EA  + + M Q+ + PN   Y+TL+D  C
Sbjct: 366 FLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALC 425

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ AE  F  M + G   + V +  L+ G C   + E+A  L+ EMV++GI P VV
Sbjct: 426 KLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVV 485

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            +NT+   L    +V  A +L + M+R     D  +YN  I G C  G   EA +L   +
Sbjct: 486 FFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIM 545

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL---------------------PRRV 291
             +  + +   YN L+ G C+ GR++ A  +F+ +                      RR 
Sbjct: 546 LSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRF 605

Query: 292 LVA--------------DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A               + TYNI+++GL  +  +D+A  +F  +    +  ++I F  +
Sbjct: 606 SEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIM 665

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           I   ++  +    + L   +    ++PD +   ++ +
Sbjct: 666 IGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAE 702



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 160/335 (47%), Gaps = 5/335 (1%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEA 105
           + PDV TY+ L+   C           F  ++  G     VV  N ++  LC   ++ EA
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 106 -SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM---ESMGCKHDDVSYNI 161
              LL  M +    PN  +Y+TL+ GFC   +   A EL   M   +   C  + VSYN 
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           +ING+    +V++A +L+ +M  +GI P VVTY  +  GL +   V+ A  +F++M    
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           V  +  TY   I G    G   E V + + +     E D   Y  L+D LCK G+   A 
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEAR 329

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           +LF S+ R+ +  DV  Y I++HG    G + + H     M  N ++PN  IF  +   F
Sbjct: 330 KLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAF 389

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +     + +++ +KM+++ + P+    + ++D L
Sbjct: 390 AKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDAL 424



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 116/227 (51%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V  KPN  TYNT++ G C++G +D A ++F +M    I P VVTYN+++HGL     +
Sbjct: 546 LSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRF 605

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +EAK L+  M+  G Q S+ T+N+I++ L KN  +DEA ++   +  +D++ +  T++ +
Sbjct: 606 SEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIM 665

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +      G+   A  LF ++ + G   D  +Y ++     +   +EE   ++ EM   G 
Sbjct: 666 IGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGC 725

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
            P  +  N L   L     +  A     ++   + + + ST +  I 
Sbjct: 726 APNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLIS 772



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 78/159 (49%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TYN I++GL K   VD+A  +F  +  +++  D++T+N +I  L       +A  LF  +
Sbjct: 626 TYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATI 685

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
              G+ P V T+ +I + L + G ++E   +   M +    PN+   + L+    L G I
Sbjct: 686 SANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDI 745

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           +RA      ++      +  + ++LI+ + + +   ++L
Sbjct: 746 SRAGAYLSKIDEKNFSLEASTTSMLISLFSREEHQAKSL 784


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 147/363 (40%), Positives = 218/363 (60%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVTY T+I  LCK G V+ A   F QM  E ++P  + YNSLIH LC  + W++AK L
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+D+G+    + FN I+D  CK G++ E+ +L DLMV+  V+P+  TYSTL+DG+CL
Sbjct: 467 ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCL 526

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A +L  SM S+G K D V+YN LINGYCK   +E+AL L+REM S G+ P ++T
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GLF+  +   A +L+  +       + STYN  + GLCKN    EA+ +F+ L 
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   +L+ + +N +I  L K GR + A +LF +L    LV DV TY++M   L   G ++
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLE 706

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +  DLFL MEEN    N  +  +++   ++    ++    L  + EK    +AS  S+ +
Sbjct: 707 ELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFL 766

Query: 374 DLL 376
           DLL
Sbjct: 767 DLL 769



 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 199/395 (50%), Gaps = 35/395 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY++II  LCK   +DKA  +   M    + P+  TYNS++HG C +    EA   
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   GV+P VVT+N +MD LCKNG+  EA ++ D M +R ++P   TY TL+ G+  
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 134 -----------------------------------TGKINRAEELFGSMESMGCKHDDVS 158
                                               GK+++A  +F  M   G   D V+
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y  +I   CK+  VE+A+  + +M+ + + P  + YN+L   L    + + A +L  EM 
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  DT  +N+ ID  CK G ++E+ +LF  +  +  + DI  Y+ LIDG C +G+++
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +L  S+    +  D VTYN +I+G C   +M+ A  LF +ME + V+P++I +  ++
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            G  +  + +   EL   + E     + S  ++++
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 199/360 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   ++ +I    K+G VD+A  +F +M+ + +NPD VTY ++I  LC +    +A R 
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+D+ + P  + +N ++  LC   K D+A  L+  M+ R +  +   +++++D  C 
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  +E+LF  M  +G K D ++Y+ LI+GYC   +++EA  L   MVS G+KP  VT
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G  +I ++E AL LF EM+   V+ D  TYN  + GL +      A EL+  + 
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +L++  YN ++ GLCK+   + AL +F++L    L  +  T+NIMI  L   G+ D
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A DLF  +  N + P+V  +  +    +      ++ +L   M+E     ++ +++ +V
Sbjct: 672 EAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 204/429 (47%), Gaps = 78/429 (18%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMK--GENINPDVVTYNSLIHGLCHANDWNE 69
           C PN  +YN ++ GLC E    +A  L   M   G +  PDVV+Y ++I+G     D ++
Sbjct: 158 CIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDK 217

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A   + EM+D+G+ P+VVT++ I+  LCK   MD+A  +L  MV+  V PN  TY++++ 
Sbjct: 218 AYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVH 277

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+C +G+   A      M S G + D V+YN L++  CKN    EA  ++  M  +G+KP
Sbjct: 278 GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP 337

Query: 190 TVVTYNTLFLG------LFEIH-----------------------------QVEHALKLF 214
            + TY TL  G      L E+H                             +V+ A+ +F
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---------------------- 252
            +M++  +  DT TY T I  LCK+G + +A+  F  +                      
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457

Query: 253 ----------------GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
                           GI    LD   +N +ID  CK GR+  + +LF  + R  +  D+
Sbjct: 458 DKWDKAKELILEMLDRGIC---LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 514

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           +TY+ +I G C  G+MD+A  L   M    + P+ + + TLI+G+ +I++    + L  +
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574

Query: 357 MKEKKVMPD 365
           M+   V PD
Sbjct: 575 MESSGVSPD 583



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 167/336 (49%), Gaps = 3/336 (0%)

Query: 44  GENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMD 103
            + + P++ TY  LI   C A   +        ++ +G +   + F  ++  LC + +  
Sbjct: 84  ADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS 143

Query: 104 EASRL-LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG--CKHDDVSYN 160
           +A  + L  M Q    PN F+Y+ L+ G C   +   A EL   M   G  C  D VSY 
Sbjct: 144 DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYT 203

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            +ING+ K  ++++A   Y EM+ +GI P VVTY+++   L +   ++ A+++   M ++
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN 263

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            V  +  TYN+ + G C +G   EA+   + +     E D+  YN L+D LCK+GR   A
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            ++F S+ +R L  ++ TY  ++ G    G + + H L   M  N + PN  +F  LI  
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + +  K  + + +  KM+++ + PD      V+ +L
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL 419



 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 185/399 (46%), Gaps = 38/399 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY  +I   C  G +D   A    +  +    D + +  L+ GLC     ++A  +
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR--DVRPNAFTYSTLMDG 130
               M Q G  P+V ++N+++  LC   +  EA  LL +M     D  P+  +Y+T+++G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           F   G +++A   +  M   G   + V+Y+ +I   CK + +++A+ +   MV  G+ P 
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             TYN++  G     Q + A+   ++M  D V  D  TYN+ +D LCKNG   EA ++F 
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 251 TLGILKCELDIQAYNCLIDG--------------------------------LC---KSG 275
           ++     + +I  Y  L+ G                                +C   K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           +++ A+ +F  + ++ L  D VTY  +I  LC  G+++ A   F  M +  ++P  I++ 
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +LIH     +K  K  EL+ +M ++ +  D    + ++D
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 119/239 (49%), Gaps = 2/239 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            IGV  KP+ +TY+T+IDG C  G +D+A  L   M    + PD VTYN+LI+G C  + 
Sbjct: 507 RIGV--KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A  LF EM   GV P ++T+N+I+  L +  +   A  L   + +   +    TY+ 
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ G C     + A  +F ++     + +  ++NI+I    K    +EA  L+  + + G
Sbjct: 625 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANG 684

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           + P V TY+ +   L E   +E    LF  M+ +   A++   N+ +  L + G I  A
Sbjct: 685 LVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 114/234 (48%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V  KP+ VTYNT+I+G CK   ++ A  LF +M+   ++PD++TYN ++ GL      
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             AK L+  + + G Q  + T+N+I+  LCKN   DEA R+   +   D++    T++ +
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +      G+ + A++LF ++ + G   D  +Y+++     +   +EE   L+  M   G 
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
                  N++   L +   +  A      +     + + ST + F+D L    Y
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGGKY 774


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 140/351 (39%), Positives = 214/351 (60%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V YNTIIDGLCK+  V++A  L+ +M    I P+V+TY++LI+G C A    EA  
Sbjct: 147 RPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFG 206

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+ + + P+V T+ ++MD LCK GK+ EA  LL +M +  V+PN  +Y+TLMDG+C
Sbjct: 207 LLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYC 266

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G++  A+++F +M   G   +  SYNI+I+  CK+K V+EA++L RE++ K + P  V
Sbjct: 267 LIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTV 326

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY++L  G  ++ ++  AL L +EM      AD  TY + +D LCKN  + +A  LF  +
Sbjct: 327 TYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM 386

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + +   Y  LIDGLCK GR + A +LF+ L  +    +V TYN+MI GLC +G +
Sbjct: 387 KERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGML 446

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           D+A  +   MEEN   P+ + F  +I      ++  K  +LLH+M  K ++
Sbjct: 447 DEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLL 497



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 194/363 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  + +N I+  L K      A +LF QM+ + I PD+ T N LI+  CH      +  +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G QP+ +T N +M  LC  G++ ++    D +V +  + +  +Y+TL++G C 
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A +L   +E    + + V YN +I+G CK+K V EA  LY EM ++GI P V+T
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+TL  G     Q+  A  L  EM   ++  +  TY   +D LCK G + EA  L   + 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + ++ +YN L+DG C  G ++ A ++F ++ ++ +  +V +YNIMI  LC   ++D
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A +L  ++    + PN + + +LI GF ++ + +  ++LL +M  +    D    + ++
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 374 DLL 376
           D L
Sbjct: 368 DAL 370



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 5/104 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N  TYN +I GLCKEG +D+A A+  +M+     PD VT+  +I  L   +  ++A+
Sbjct: 426 CRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAE 485

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           +L  EM    +   ++ F     E   N + D+A +LL  M+ +
Sbjct: 486 KLLHEM----IAKDLLRFRDFHGERSPN-ENDKAEKLLHEMIAK 524


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/363 (40%), Positives = 218/363 (60%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVTY T+I  LCK G V+ A   F QM  E ++P  + YNSLIH LC  + W++AK L
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+D+G+    + FN I+D  CK G++ E+ +L DLMV+  V+P+  TYSTL+DG+CL
Sbjct: 467 ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCL 526

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A +L  SM S+G K D V+YN LINGYCK   +E+AL L+REM S G+ P ++T
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GLF+  +   A +L+  +       + STYN  + GLCKN    EA+ +F+ L 
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   +L+ + +N +I  L K GR + A +LF +L    LV DV TY++M   L   G ++
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLE 706

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +  DLFL MEEN    N  +  +++   ++    ++    L  + EK    +AS  S+ +
Sbjct: 707 ELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFL 766

Query: 374 DLL 376
           DLL
Sbjct: 767 DLL 769



 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 199/395 (50%), Gaps = 35/395 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY++II  LCK   +DKA  +   M    + P+  TYNS++HG C +    EA   
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   GV+P VVT+N +MD LCKNG+  EA ++ D M +R ++P   TY TL+ G+  
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 134 -----------------------------------TGKINRAEELFGSMESMGCKHDDVS 158
                                               GK+++A  +F  M   G   D V+
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y  +I   CK+  VE+A+  + +M+ + + P  + YN+L   L    + + A +L  EM 
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  DT  +N+ ID  CK G ++E+ +LF  +  +  + DI  Y+ LIDG C +G+++
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +L  S+    +  D VTYN +I+G C   +M+ A  LF +ME + V+P++I +  ++
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            G  +  + +   EL   + E     + S  ++++
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 199/360 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   ++ +I    K+G VD+A  +F +M+ + +NPD VTY ++I  LC +    +A R 
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+D+ + P  + +N ++  LC   K D+A  L+  M+ R +  +   +++++D  C 
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  +E+LF  M  +G K D ++Y+ LI+GYC   +++EA  L   MVS G+KP  VT
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G  +I ++E AL LF EM+   V+ D  TYN  + GL +      A EL+  + 
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +L++  YN ++ GLCK+   + AL +F++L    L  +  T+NIMI  L   G+ D
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A DLF  +  N + P+V  +  +    +      ++ +L   M+E     ++ +++ +V
Sbjct: 672 EAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 204/429 (47%), Gaps = 78/429 (18%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMK--GENINPDVVTYNSLIHGLCHANDWNE 69
           C PN  +YN ++ GLC E    +A  L   M   G +  PDVV+Y ++I+G     D ++
Sbjct: 158 CIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDK 217

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A   + EM+D+G+ P+VVT++ I+  LCK   MD+A  +L  MV+  V PN  TY++++ 
Sbjct: 218 AYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVH 277

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+C +G+   A      M S G + D V+YN L++  CKN    EA  ++  M  +G+KP
Sbjct: 278 GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP 337

Query: 190 TVVTYNTLFLG------LFEIH-----------------------------QVEHALKLF 214
            + TY TL  G      L E+H                             +V+ A+ +F
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---------------------- 252
            +M++  +  DT TY T I  LCK+G + +A+  F  +                      
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457

Query: 253 ----------------GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
                           GI    LD   +N +ID  CK GR+  + +LF  + R  +  D+
Sbjct: 458 DKWDKAKELILEMLDRGIC---LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 514

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           +TY+ +I G C  G+MD+A  L   M    + P+ + + TLI+G+ +I++    + L  +
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574

Query: 357 MKEKKVMPD 365
           M+   V PD
Sbjct: 575 MESSGVSPD 583



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 167/336 (49%), Gaps = 3/336 (0%)

Query: 44  GENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMD 103
            + + P++ TY  LI   C A   +        ++ +G +   + F  ++  LC + +  
Sbjct: 84  ADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS 143

Query: 104 EASRL-LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG--CKHDDVSYN 160
           +A  + L  M Q    PN F+Y+ L+ G C   +   A EL   M   G  C  D VSY 
Sbjct: 144 DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYT 203

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            +ING+ K  ++++A   Y EM+ +GI P VVTY+++   L +   ++ A+++   M ++
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN 263

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            V  +  TYN+ + G C +G   EA+   + +     E D+  YN L+D LCK+GR   A
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            ++F S+ +R L  ++ TY  ++ G    G + + H L   M  N + PN  +F  LI  
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + +  K  + + +  KM+++ + PD      V+ +L
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL 419



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 185/399 (46%), Gaps = 38/399 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY  +I   C  G +D   A    +  +    D + +  L+ GLC     ++A  +
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR--DVRPNAFTYSTLMDG 130
               M Q G  P+V ++N+++  LC   +  EA  LL +M     D  P+  +Y+T+++G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           F   G +++A   +  M   G   + V+Y+ +I   CK + +++A+ +   MV  G+ P 
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             TYN++  G     Q + A+   ++M  D V  D  TYN+ +D LCKNG   EA ++F 
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 251 TLGILKCELDIQAYNCLIDG--------------------------------LC---KSG 275
           ++     + +I  Y  L+ G                                +C   K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           +++ A+ +F  + ++ L  D VTY  +I  LC  G+++ A   F  M +  ++P  I++ 
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +LIH     +K  K  EL+ +M ++ +  D    + ++D
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487



 Score =  111 bits (278), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 119/239 (49%), Gaps = 2/239 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            IGV  KP+ +TY+T+IDG C  G +D+A  L   M    + PD VTYN+LI+G C  + 
Sbjct: 507 RIGV--KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A  LF EM   GV P ++T+N+I+  L +  +   A  L   + +   +    TY+ 
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ G C     + A  +F ++     + +  ++NI+I    K    +EA  L+  + + G
Sbjct: 625 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANG 684

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           + P V TY+ +   L E   +E    LF  M+ +   A++   N+ +  L + G I  A
Sbjct: 685 LVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 114/234 (48%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V  KP+ VTYNT+I+G CK   ++ A  LF +M+   ++PD++TYN ++ GL      
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             AK L+  + + G Q  + T+N+I+  LCKN   DEA R+   +   D++    T++ +
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +      G+ + A++LF ++ + G   D  +Y+++     +   +EE   L+  M   G 
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
                  N++   L +   +  A      +     + + ST + F+D L    Y
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGGKY 774


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/363 (40%), Positives = 218/363 (60%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVTY T+I  LCK G V+ A   F QM  E ++P  + YNSLIH LC  + W++AK L
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+D+G+    + FN I+D  CK G++ E+ +L DLMV+  V+P+  TYSTL+DG+CL
Sbjct: 467 ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCL 526

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A +L  SM S+G K D V+YN LINGYCK   +E+AL L+REM S G+ P ++T
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GLF+  +   A +L+  +       + STYN  + GLCKN    EA+ +F+ L 
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   +L+ + +N +I  L K GR + A +LF +L    LV DV TY++M   L   G ++
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLE 706

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +  DLFL MEEN    N  +  +++   ++    ++    L  + EK    +AS  S+ +
Sbjct: 707 ELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFL 766

Query: 374 DLL 376
           DLL
Sbjct: 767 DLL 769



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 199/395 (50%), Gaps = 35/395 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY++II  LCK   +DKA  +   M    + P+  TYNS++HG C +    EA   
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   GV+P VVT+N +MD LCKNG+  EA ++ D M +R ++P   TY TL+ G+  
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 134 -----------------------------------TGKINRAEELFGSMESMGCKHDDVS 158
                                               GK+++A  +F  M   G   D V+
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y  +I   CK+  VE+A+  + +M+ + + P  + YN+L   L    + + A +L  EM 
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  DT  +N+ ID  CK G ++E+ +LF  +  +  + DI  Y+ LIDG C +G+++
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +L  S+    +  D VTYN +I+G C   +M+ A  LF +ME + V+P++I +  ++
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            G  +  + +   EL   + E     + S  ++++
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 199/360 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   ++ +I    K+G VD+A  +F +M+ + +NPD VTY ++I  LC +    +A R 
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+D+ + P  + +N ++  LC   K D+A  L+  M+ R +  +   +++++D  C 
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  +E+LF  M  +G K D ++Y+ LI+GYC   +++EA  L   MVS G+KP  VT
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G  +I ++E AL LF EM+   V+ D  TYN  + GL +      A EL+  + 
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +L++  YN ++ GLCK+   + AL +F++L    L  +  T+NIMI  L   G+ D
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A DLF  +  N + P+V  +  +    +      ++ +L   M+E     ++ +++ +V
Sbjct: 672 EAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 204/429 (47%), Gaps = 78/429 (18%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMK--GENINPDVVTYNSLIHGLCHANDWNE 69
           C PN  +YN ++ GLC +    +A  L   M   G +  PDVV+Y ++I+G     D ++
Sbjct: 158 CIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDK 217

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A   + EM+D+G+ P+VVT++ I+  LCK   MD+A  +L  MV+  V PN  TY++++ 
Sbjct: 218 AYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVH 277

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+C +G+   A      M S G + D V+YN L++  CKN    EA  ++  M  +G+KP
Sbjct: 278 GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP 337

Query: 190 TVVTYNTLFLG------LFEIH-----------------------------QVEHALKLF 214
            + TY TL  G      L E+H                             +V+ A+ +F
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---------------------- 252
            +M++  +  DT TY T I  LCK+G + +A+  F  +                      
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457

Query: 253 ----------------GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
                           GI    LD   +N +ID  CK GR+  + +LF  + R  +  D+
Sbjct: 458 DKWDKAKELILEMLDRGIC---LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 514

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           +TY+ +I G C  G+MD+A  L   M    + P+ + + TLI+G+ +I++    + L  +
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574

Query: 357 MKEKKVMPD 365
           M+   V PD
Sbjct: 575 MESSGVSPD 583



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 166/336 (49%), Gaps = 3/336 (0%)

Query: 44  GENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMD 103
            + + P++ TY  L+   C A   +        ++ +G     + F  ++  LC + +  
Sbjct: 84  ADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTS 143

Query: 104 EASRL-LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG--CKHDDVSYN 160
           +A  + L  M Q    PN F+Y+ L+ G C   +   A EL   M   G  C  D VSY 
Sbjct: 144 DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYT 203

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            +ING+ K  ++++A   Y EM+ +GI P VVTY+++   L +   ++ A+++   M ++
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN 263

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            V  +  TYN+ + G C +G   EA+   + +     E D+  YN L+D LCK+GR   A
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            ++F S+ +R L  ++ TY  ++ G    G + + H L   M  N + PN  +F  LI  
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + +  K  + + +  KM+++ + PD      V+ +L
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL 419



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 186/399 (46%), Gaps = 38/399 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY  ++   C  G +D   A    +  +    D + +  ++ GLC     ++A  +
Sbjct: 89  PNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDI 148

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR--DVRPNAFTYSTLMDG 130
               M Q G  P+V ++N+++  LC + +  EA  LL +M     D  P+  +Y+T+++G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           F   G +++A   +  M   G   + V+Y+ +I   CK + +++A+ +   MV  G+ P 
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             TYN++  G     Q + A+   ++M  D V  D  TYN+ +D LCKNG   EA ++F 
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 251 TLGILKCELDIQAYNCLIDG--------------------------------LC---KSG 275
           ++     + +I  Y  L+ G                                +C   K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           +++ A+ +F  + ++ L  D VTY  +I  LC  G+++ A   F  M +  ++P  I++ 
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +LIH     +K  K  EL+ +M ++ +  D    + ++D
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 119/239 (49%), Gaps = 2/239 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            IGV  KP+ +TY+T+IDG C  G +D+A  L   M    + PD VTYN+LI+G C  + 
Sbjct: 507 RIGV--KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A  LF EM   GV P ++T+N+I+  L +  +   A  L   + +   +    TY+ 
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ G C     + A  +F ++     + +  ++NI+I    K    +EA  L+  + + G
Sbjct: 625 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANG 684

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           + P V TY+ +   L E   +E    LF  M+ +   A++   N+ +  L + G I  A
Sbjct: 685 LVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 114/234 (48%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V  KP+ VTYNT+I+G CK   ++ A  LF +M+   ++PD++TYN ++ GL      
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             AK L+  + + G Q  + T+N+I+  LCKN   DEA R+   +   D++    T++ +
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +      G+ + A++LF ++ + G   D  +Y+++     +   +EE   L+  M   G 
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
                  N++   L +   +  A      +     + + ST + F+D L    Y
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGGKY 774


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 138/363 (38%), Positives = 212/363 (58%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y+T++DGLCK+G V +A  L L+M G+ I P++VTY  LI GLC+   W EA  L
Sbjct: 214 PNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSL 273

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EMM  GV P + + N+++D LCK GK+ +A  ++  M+     P+ FTY++L+D +CL
Sbjct: 274 LDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCL 333

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +++ A  +F  M S GC  D V+Y  LI+G+CK K + +A+ L  EM+  G  P VVT
Sbjct: 334 QNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVT 393

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           + TL  G  ++ +   A +LF  M +     +  T    +DGLCK+  + EA+ LF  + 
Sbjct: 394 WTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAME 453

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +L+I  Y+ ++DG+C +G+L  ALELF  LP + L  +V  Y IMI+G    G +D
Sbjct: 454 KSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLD 513

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA DL  +MEEN   P+   +   + G V   + ++ I+ L  M++K    DA+   M++
Sbjct: 514 KAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMII 573

Query: 374 DLL 376
           + L
Sbjct: 574 NYL 576



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 180/362 (49%), Gaps = 1/362 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEAKR 72
           P+ + +  ++  + K      A +L  +M     I PD    N +I+ LCH         
Sbjct: 73  PSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFS 132

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M+  G++PSVVTF ++++ LC  G +  A  L+D + +   R +  TY  L++G C
Sbjct: 133 VLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLC 192

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK + A      ME      + V Y+ +++G CK+  V EAL L  EM  KGIKP +V
Sbjct: 193 KMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLV 252

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L  GL    + + A  L +EM +  V  D  + N  +D LCK G I++A  +   +
Sbjct: 253 TYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFM 312

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            ++    D+  YN LID  C   +++ A  +F  +  R  + D+V Y  +IHG C    +
Sbjct: 313 ILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNI 372

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +KA  L  +M +    P+V+ + TLI GF ++ +P    EL   M +   +P+    +++
Sbjct: 373 NKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAII 432

Query: 373 VD 374
           +D
Sbjct: 433 LD 434



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 171/362 (47%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+T   N +I+ LC    V    ++   M    + P VVT+  LI+GLC   D   A  
Sbjct: 108 KPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVE 167

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   +   G +  V T+ V+++ LCK GK  EA   L  M +R+  PN   YST+MDG C
Sbjct: 168 LVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLC 227

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A  L   M   G K + V+Y  LI G C     +EA SL  EM+  G+ P + 
Sbjct: 228 KDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQ 287

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           + N L   L +  ++  A  +   M       D  TYN+ ID  C    + EA  +F  +
Sbjct: 288 SLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELM 347

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  DI AY  LI G CK   +  A+ L   + +     DVVT+  +I G C  G+ 
Sbjct: 348 VSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRP 407

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A +LFL+M +    PN+     ++ G  +    S+ + L H M++  +  +  I S++
Sbjct: 408 LAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSII 467

Query: 373 VD 374
           +D
Sbjct: 468 LD 469



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 156/303 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTY  +I GLC  G   +A +L  +M    + PD+ + N L+  LC      +AK 
Sbjct: 248 KPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKS 307

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M+  G  P V T+N ++D  C   +MDEA+R+ +LMV R   P+   Y++L+ G+C
Sbjct: 308 VIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWC 367

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               IN+A  L   M  +G   D V++  LI G+C+      A  L+  M   G  P + 
Sbjct: 368 KIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQ 427

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T   +  GL +   +  AL LF  M++ ++  +   Y+  +DG+C  G +  A+ELF  L
Sbjct: 428 TCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCL 487

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                ++++ AY  +I+G  K G L+ A +L  ++     + D  TYN+ + GL  + ++
Sbjct: 488 PAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREI 547

Query: 313 DKA 315
            ++
Sbjct: 548 ARS 550



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 113/228 (49%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V Y ++I G CK   ++KA  L  +M      PDVVT+ +LI G C       AK
Sbjct: 352 CLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAK 411

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M   G  P++ T  +I+D LCK+  + EA  L   M + ++  N   YS ++DG 
Sbjct: 412 ELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGM 471

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+N A ELF  + + G + +  +Y I+ING+ K   +++A  L   M   G  P  
Sbjct: 472 CSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDS 531

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            TYN    GL    ++  ++K    M+    + D +T    I+ L  N
Sbjct: 532 CTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYLSTN 579



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 4/261 (1%)

Query: 120 NAFTYSTLMDGFCLTGK---INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           N   +   M   C +GK   I+ A   F +M  M      + + +L+    K K    A+
Sbjct: 36  NKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAI 95

Query: 177 SLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
           SL +EM S  GIKP     N +   L  +  V     +   M +  +     T+   I+G
Sbjct: 96  SLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILING 155

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           LC  G +  AVEL   +       D++ Y  LI+GLCK G+   A+   R +  R    +
Sbjct: 156 LCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPN 215

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           VV Y+ ++ GLC DG + +A  L L+M    + PN++ +  LI G     +  +   LL 
Sbjct: 216 VVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLD 275

Query: 356 KMKEKKVMPDASIVSMVVDLL 376
           +M +  VMPD   ++++VD+L
Sbjct: 276 EMMKMGVMPDLQSLNILVDVL 296



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 81/157 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T   I+DGLCK   + +A +LF  M+  N++ ++V Y+ ++ G+C A   N A  L
Sbjct: 424 PNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALEL 483

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  +  +G+Q +V  + ++++   K G +D+A  LL  M +    P++ TY+  + G   
Sbjct: 484 FSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVA 543

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
             +I R+ +    M   G   D  +  ++IN    N+
Sbjct: 544 EREIARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQ 580



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 42/95 (44%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N   Y  +I+G  K+G +DKA+ L   M+     PD  TYN  + GL    +   + +  
Sbjct: 495 NVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYL 554

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
             M D+G      T  +I++ L  N   +E    L
Sbjct: 555 TMMRDKGFSVDATTTEMIINYLSTNQGDNELREFL 589


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  272 bits (695), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/363 (40%), Positives = 218/363 (60%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVTY T+I  LCK G V+ A   F QM  E ++P  + YNSLIH LC  + W++AK L
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+D+G+    + FN I+D  CK G++ E+ +L DLMV+  V+P+  TYSTL+DG+CL
Sbjct: 467 ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCL 526

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A +L  SM S+G K D V+YN LINGYCK   +E+AL L+REM S G+ P ++T
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GLF+  +   A +L+  +       + STYN  + GLCKN    EA+ +F+ L 
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   +L+ + +N +I  L K GR + A +LF +L    LV DV TY++M   L   G ++
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLE 706

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +  DLFL MEEN    N  +  +++   ++    ++    L  + EK    +AS  S+ +
Sbjct: 707 ELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFL 766

Query: 374 DLL 376
           DLL
Sbjct: 767 DLL 769



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 199/395 (50%), Gaps = 35/395 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY++II  LCK   +DKA  +   M    + P+  TYNS++HG C +    EA   
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   GV+P VVT+N +MD LCKNG+  EA ++ D M +R ++P   TY TL+ G+  
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 134 -----------------------------------TGKINRAEELFGSMESMGCKHDDVS 158
                                               GK+++A  +F  M   G   D V+
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y  +I   CK+  VE+A+  + +M+ + + P  + YN+L   L    + + A +L  EM 
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  DT  +N+ ID  CK G ++E+ +LF  +  +  + DI  Y+ LIDG C +G+++
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +L  S+    +  D VTYN +I+G C   +M+ A  LF +ME + V+P++I +  ++
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            G  +  + +   EL   + E     + S  ++++
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 199/360 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   ++ +I    K+G VD+A  +F +M+ + +NPD VTY ++I  LC +    +A R 
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+D+ + P  + +N ++  LC   K D+A  L+  M+ R +  +   +++++D  C 
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  +E+LF  M  +G K D ++Y+ LI+GYC   +++EA  L   MVS G+KP  VT
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G  +I ++E AL LF EM+   V+ D  TYN  + GL +      A EL+  + 
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +L++  YN ++ GLCK+   + AL +F++L    L  +  T+NIMI  L   G+ D
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A DLF  +  N + P+V  +  +    +      ++ +L   M+E     ++ +++ +V
Sbjct: 672 EAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 204/429 (47%), Gaps = 78/429 (18%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMK--GENINPDVVTYNSLIHGLCHANDWNE 69
           C PN  +YN ++ GLC E    +A  L   M   G +  PDVV+Y ++I+G     D ++
Sbjct: 158 CIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDK 217

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A   + EM+D+G+ P+VVT++ I+  LCK   MD+A  +L  MV+  V PN  TY++++ 
Sbjct: 218 AYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVH 277

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+C +G+   A      M S G + D V+YN L++  CKN    EA  ++  M  +G+KP
Sbjct: 278 GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP 337

Query: 190 TVVTYNTLFLG------LFEIH-----------------------------QVEHALKLF 214
            + TY TL  G      L E+H                             +V+ A+ +F
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---------------------- 252
            +M++  +  DT TY T I  LCK+G + +A+  F  +                      
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457

Query: 253 ----------------GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
                           GI    LD   +N +ID  CK GR+  + +LF  + R  +  D+
Sbjct: 458 DKWDKAKELILEMLDRGIC---LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 514

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           +TY+ +I G C  G+MD+A  L   M    + P+ + + TLI+G+ +I++    + L  +
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574

Query: 357 MKEKKVMPD 365
           M+   V PD
Sbjct: 575 MESSGVSPD 583



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 167/336 (49%), Gaps = 3/336 (0%)

Query: 44  GENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMD 103
            + + P++ TY  LI   C A   +        ++ +G +   + F  ++  LC + +  
Sbjct: 84  ADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS 143

Query: 104 EASRL-LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG--CKHDDVSYN 160
           +A  + L  M Q    PN F+Y+ L+ G C   +   A EL   M   G  C  D VSY 
Sbjct: 144 DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYT 203

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            +ING+ K  ++++A   Y EM+ +GI P VVTY+++   L +   ++ A+++   M ++
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN 263

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            V  +  TYN+ + G C +G   EA+   + +     E D+  YN L+D LCK+GR   A
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            ++F S+ +R L  ++ TY  ++ G    G + + H L   M  N + PN  +F  LI  
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + +  K  + + +  KM+++ + PD      V+ +L
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGIL 419



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 185/399 (46%), Gaps = 38/399 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY  +I   C  G +D   A    +  +    D + +  L+ GLC     ++A  +
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR--DVRPNAFTYSTLMDG 130
               M Q G  P+V ++N+++  LC   +  EA  LL +M     D  P+  +Y+T+++G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           F   G +++A   +  M   G   + V+Y+ +I   CK + +++A+ +   MV  G+ P 
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             TYN++  G     Q + A+   ++M  D V  D  TYN+ +D LCKNG   EA ++F 
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 251 TLGILKCELDIQAYNCLIDG--------------------------------LC---KSG 275
           ++     + +I  Y  L+ G                                +C   K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           +++ A+ +F  + ++ L  D VTY  +I  LC  G+++ A   F  M +  ++P  I++ 
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +LIH     +K  K  EL+ +M ++ +  D    + ++D
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 119/239 (49%), Gaps = 2/239 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            IGV  KP+ +TY+T+IDG C  G +D+A  L   M    + PD VTYN+LI+G C  + 
Sbjct: 507 RIGV--KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A  LF EM   GV P ++T+N+I+  L +  +   A  L   + +   +    TY+ 
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ G C     + A  +F ++     + +  ++NI+I    K    +EA  L+  + + G
Sbjct: 625 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANG 684

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           + P V TY+ +   L E   +E    LF  M+ +   A++   N+ +  L + G I  A
Sbjct: 685 LVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 114/234 (48%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V  KP+ VTYNT+I+G CK   ++ A  LF +M+   ++PD++TYN ++ GL      
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             AK L+  + + G Q  + T+N+I+  LCKN   DEA R+   +   D++    T++ +
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +      G+ + A++LF ++ + G   D  +Y+++     +   +EE   L+  M   G 
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
                  N++   L +   +  A      +     + + ST + F+D L    Y
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGGKY 774


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  271 bits (694), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 136/336 (40%), Positives = 202/336 (60%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G V +PN V YN I+DGLCK+G V +A+ L+  + G  I+PDV TY  LIHG C    W 
Sbjct: 211 GQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWR 270

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           E  RL  +M+D+ V  +V T+N+++D LCK G + +A  + +LM++R  RP+  T++TLM
Sbjct: 271 EVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLM 330

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G+CL   +  A +LF +    G   D  SYNILI GYCKN  ++EALSL+ +M  K + 
Sbjct: 331 SGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLA 390

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P +VTY++L  GL +  ++ +A +LF  +     + +  TYN  +D LCK   + +A+EL
Sbjct: 391 PNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIEL 450

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +       ++ +YN LI+G CKS R++ A+ LF  + RR LV D VTYN +I GLC 
Sbjct: 451 FNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCK 510

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
            G++  A +LF  M +     +VI +  L   F +I
Sbjct: 511 SGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKI 546



 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 120/343 (34%), Positives = 196/343 (57%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTY T+I+GLCK G   +A  L  +M+G+ + P+VV YN ++ GLC      EA+ L+ +
Sbjct: 184 VTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSD 243

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           ++ +G+ P V T+  ++   C  G+  E +RLL  MV R+V  N +TY+ L+D  C  G 
Sbjct: 244 VVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGM 303

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           + +A ++   M   G + D V++N L++GYC   +V EA  L+      GI P V +YN 
Sbjct: 304 LGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNI 363

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L +G  + ++++ AL LF +M    +A +  TY++ IDGLCK+G I  A ELF  +    
Sbjct: 364 LIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGG 423

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              ++  YN ++D LCK   ++ A+ELF  +  R L  +V +YNI+I+G C   ++D+A 
Sbjct: 424 PSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAM 483

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           +LF +M    + P+ + +  LI G  +  + S   EL + M +
Sbjct: 484 NLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHD 526



 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 131/362 (36%), Positives = 194/362 (53%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N +T  TI+ GLC  G V KA      +  +    D VTY +LI+GLC      EA  L 
Sbjct: 147 NAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELL 206

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M  Q V+P+VV +N+I+D LCK+G + EA  L   +V R + P+ FTY+ L+ GFC  
Sbjct: 207 HKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGL 266

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+      L   M       +  +YNILI+  CK   + +A  +   M+ +G +P +VT+
Sbjct: 267 GQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTF 326

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           NTL  G    + V  A KLF+      +  D  +YN  I G CKN  I EA+ LF  +  
Sbjct: 327 NTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNY 386

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
            K   +I  Y+ LIDGLCKSGR+  A ELF ++       +V+TYNIM+  LC    +DK
Sbjct: 387 KKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDK 446

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A +LF  M E  + PNV  +  LI+G+ +  +  + + L  +M  + ++PD+   + ++D
Sbjct: 447 AIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLID 506

Query: 375 LL 376
            L
Sbjct: 507 GL 508



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 188/396 (47%), Gaps = 35/396 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +N I+  + K      A +L  QM    I P +VT + LI+  CH      A  +
Sbjct: 76  PSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSV 135

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              ++ +G Q + +T   IM  LC NG++ +A    D +V +    +  TY TL++G C 
Sbjct: 136 LGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCK 195

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G    A EL   ME    + + V YN++++G CK+  V EA  LY ++V +GI P V T
Sbjct: 196 IGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFT 255

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY------------ 241
           Y  L  G   + Q     +L  +M   +V  +  TYN  ID LCK G             
Sbjct: 256 YTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMI 315

Query: 242 -----------------------IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                                  +VEA +LF T        D+ +YN LI G CK+ R++
Sbjct: 316 ERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRID 375

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            AL LF  +  + L  ++VTY+ +I GLC  G++  A +LF  + +   +PNVI +  ++
Sbjct: 376 EALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIML 435

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
               +I    K IEL + M E+ + P+ S  +++++
Sbjct: 436 DALCKIQLVDKAIELFNLMFERGLTPNVSSYNILIN 471



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 177/351 (50%), Gaps = 2/351 (0%)

Query: 28  KEGF--VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPS 85
           K GF  +D A ALF ++   +  P VV +N ++  +     +  A  L  +M  +G+ PS
Sbjct: 53  KSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPS 112

Query: 86  VVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFG 145
           +VT +++++  C  G M  A  +L ++++R  + NA T +T+M G C+ G++ +A E   
Sbjct: 113 IVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHD 172

Query: 146 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 205
           S+ + G   D+V+Y  LING CK     EA  L  +M  + ++P VV YN +  GL +  
Sbjct: 173 SVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDG 232

Query: 206 QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYN 265
            V  A  L+ ++    +  D  TY   I G C  G   E   L   +      L++  YN
Sbjct: 233 LVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYN 292

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
            LID LCK G L  A ++   +  R    D+VT+N ++ G C    + +A  LF    E 
Sbjct: 293 ILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAEC 352

Query: 326 AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            + P+V  +  LI G+ + N+  + + L +KM  KK+ P+    S ++D L
Sbjct: 353 GITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGL 403



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/264 (35%), Positives = 138/264 (52%), Gaps = 35/264 (13%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  TYN +ID LCK+G + KA  +   M      PD+VT+N+L+ G C  ND  EA++LF
Sbjct: 287 NVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLF 346

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
               + G+ P V ++N+++   CKN ++DEA  L + M  + + PN  TYS+L+DG C +
Sbjct: 347 DTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKS 406

Query: 135 GKINRAEELFGSMESMG---------------CKHDDV--------------------SY 159
           G+I+ A ELF ++   G               CK   V                    SY
Sbjct: 407 GRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSY 466

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           NILINGYCK+K ++EA++L+ EM  + + P  VTYN L  GL +  ++ HA +LF  M  
Sbjct: 467 NILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHD 526

Query: 220 DDVAADTSTYNTFIDGLCKNGYIV 243
                D  TYN   D   K  +++
Sbjct: 527 GGPPVDVITYNILFDAFSKIQHVI 550


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  271 bits (692), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 140/355 (39%), Positives = 217/355 (61%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G +   N V Y+TIIDGLCK+  V  A  L+ +M  + I P VVT++SLI+G C    + 
Sbjct: 186 GKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFK 245

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A RLF EM+ + + P   TFN+++D LCK GK+ EA  ++ +M++  V P   TY+TLM
Sbjct: 246 DAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLM 305

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+CL  ++ +A+ +   +  M    +  SYNI+ING+CK K V+EAL L+ EM  +GI 
Sbjct: 306 DGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIA 365

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  VTYN+L  GL +  ++ +A +L +EM  + + AD  TYN+ ID  CKN ++ +A+ L
Sbjct: 366 PHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIAL 425

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            + +     + ++  YN LIDGLCK G+L+ A ++F+ L  +    +  TYNIMI+GLC 
Sbjct: 426 VKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCK 485

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           +G  D+A  L   ME+N + P+ + + T+I      ++  K  +LL +M  K V+
Sbjct: 486 EGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVV 540



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/362 (33%), Positives = 194/362 (53%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N VTY  +I+GLCK G    A  +  Q++G+ +N +VV Y+++I GLC      +A  L+
Sbjct: 157 NHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLY 216

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ + + P+VVTF+ ++   C  GK  +A RL + MV +++ P+A+T++ L+D  C  
Sbjct: 217 SEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKE 276

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GKI  A+ +   M   G +   V+YN L++GYC   EV +A  +   +    + P   +Y
Sbjct: 277 GKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSY 336

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N +  G  +I  V+ AL LF EM    +A    TYN+ IDGLCK G I  A EL   +  
Sbjct: 337 NIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHN 396

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                DI  YN LID  CK+  ++ A+ L + +    +  ++ TYNI+I GLC  GQ+  
Sbjct: 397 NCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKN 456

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A D+F D+       N   +  +I+G  +     +   LL KM++  ++PDA     ++ 
Sbjct: 457 AQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQ 516

Query: 375 LL 376
            L
Sbjct: 517 AL 518



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 176/364 (48%), Gaps = 15/364 (4%)

Query: 14  PNTVTYNTIIDGLCK-EGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           P+ V +N I+  L K +       +L  QM+ + + PD+ T + LI+  CH      A  
Sbjct: 64  PSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFS 123

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +++  G              LC NGK++EA    D ++      N  TY  L++G C
Sbjct: 124 VFAKILKMG--------------LCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLC 169

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+   A ++   +E      + V Y+ +I+G CK+K V +A  LY EM+ K I PTVV
Sbjct: 170 KMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVV 229

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+++L  G   + + + A +LF EM   ++  D  T+N  +D LCK G I EA  +   +
Sbjct: 230 TFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVM 289

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                E  +  YN L+DG C    +  A  +   + R  +  +  +YNIMI+G C    +
Sbjct: 290 MKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMV 349

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A  LF +M    +AP+ + + +LI G  +  +     EL+ +M    +  D    + +
Sbjct: 350 DEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSL 409

Query: 373 VDLL 376
           +D+ 
Sbjct: 410 IDVF 413



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 112/234 (47%), Gaps = 15/234 (6%)

Query: 144 FGSMESMGCKHDDVSYNILINGYCKNK-EVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 202
           F  M  +      V +N ++    K K      LSL  +M SKG+KP + T + L     
Sbjct: 54  FNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYC 113

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ 262
            + Q+  A  +F ++ +               GLC NG + EA+     +  L   L+  
Sbjct: 114 HLGQMTFAFSVFAKILKM--------------GLCLNGKVNEALLFHDHVLALGFHLNHV 159

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
            Y  LI+GLCK G+   AL++ R +  +++  +VV Y+ +I GLC D  +  A+ L+ +M
Sbjct: 160 TYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEM 219

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               + P V+ F +LI+GF  + K      L ++M  K + PDA   +++VD L
Sbjct: 220 IVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDAL 273



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 6/149 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALF--LQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +PN  TYN +IDGLCK G +  A+ +F  L +KG N+N    TYN +I+GLC    ++EA
Sbjct: 435 QPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVN--AWTYNIMINGLCKEGLFDEA 492

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           + L  +M D G+ P  VT+  I+  L    + ++A +LL  MV + V   AF     + G
Sbjct: 493 EVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAFEIRRTLVG 552

Query: 131 FCLTGKINRAEELFGSME--SMGCKHDDV 157
             L   +N    LF ++E  S G +  D+
Sbjct: 553 RTLNLGMNLISLLFSALECFSFGEETKDI 581


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  271 bits (692), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 138/364 (37%), Positives = 216/364 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY  IID LCK+G +D A + F +M+ + I  +V TYNSLI   C    W++  +
Sbjct: 262 KPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQ 321

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ + + P+VVTF+ ++D L K GK+ EA  L + M+ R + PN  TY++L+ G C
Sbjct: 322 LLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLC 381

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +++ A ++   M S GC  D  +YNILING+CK K+V++ + L+R+M  +G+    V
Sbjct: 382 NDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTV 441

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+TL  G  +  ++  A K+F+EM    V     TY   +DGLC NG + EA+ +   +
Sbjct: 442 TYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQM 501

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K ELDI  YN +I G+C + +++ A  LF SLP + +  D+ +YNIM+ GLC    +
Sbjct: 502 HKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSL 561

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  LF  M+E+   P+   + TLI   +R N  +  ++L+ +MK      DAS V +V
Sbjct: 562 SEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIV 621

Query: 373 VDLL 376
           +D+L
Sbjct: 622 MDML 625



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/373 (32%), Positives = 199/373 (53%), Gaps = 7/373 (1%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           MANG       C+PN  TY  I++ +CK G    A  L  +M+   I P VVTY  +I  
Sbjct: 222 MANG-------CQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDN 274

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           LC     ++A   F EM  +G++ +V T+N ++   C  G+ D+ ++LL  M+ R + PN
Sbjct: 275 LCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPN 334

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             T+S L+D     GK+  A++L+  M + G + + ++YN LI G C +K ++EA  +  
Sbjct: 335 VVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMD 394

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            MVSKG  P + TYN L  G  +  QV+  ++LF +M    + ADT TY+T I G C++ 
Sbjct: 395 LMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSR 454

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            ++ A ++F+ +        I  Y  L+DGLC +G LE AL +   + +  +  D+  YN
Sbjct: 455 KLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYN 514

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           I+IHG+CN  ++D A  LF  +    V  ++  +  ++ G  + +  S+   L  KMKE 
Sbjct: 515 IIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKED 574

Query: 361 KVMPDASIVSMVV 373
              PD    + ++
Sbjct: 575 GYEPDGCTYNTLI 587



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 184/360 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  + +N +   L +    D   AL  QM+ + I  D+ T N +I+  C       A   
Sbjct: 88  PTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSA 147

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++   G +P+ VTFN +++ LC  G++ EA  L+D MV     P+  T +T+++G CL
Sbjct: 148 MGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCL 207

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +++ A +L   M + GC+ +  +Y  ++N  CK+     AL L R+M  + IKP VVT
Sbjct: 208 KDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVT 267

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  +   L +  +++ AL  F EM+   + A+  TYN+ I   C  G   +  +L R + 
Sbjct: 268 YTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMI 327

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K   ++  ++ LID L K G+L  A +L+  +  R +  + +TYN +I+GLCND ++D
Sbjct: 328 TRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLD 387

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A+ +   M      P++  +  LI+GF +  +    + L  KM  + ++ D    S ++
Sbjct: 388 EANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLI 447



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 83/225 (36%), Positives = 130/225 (57%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TYN +I+G CK   VD    LF +M    +  D VTY++LI G C +     AK
Sbjct: 401 CDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAK 460

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++F EM+ QGV P ++T+ +++D LC NG+++EA  +LD M +  +  +   Y+ ++ G 
Sbjct: 461 KVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGM 520

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++ A  LF S+ S G K D  SYNI+++G CK   + EA +L+R+M   G +P  
Sbjct: 521 CNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDG 580

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            TYNTL       + +  +++L EEM+R   ++D ST    +D L
Sbjct: 581 CTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDML 625



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 134/276 (48%)

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K D+A  L   M++    P    ++ L      T + +    L   ME  G  +D  + N
Sbjct: 70  KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLN 129

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           I+IN +C+ +++  A S   ++   G +P  VT+NTL  GL    +V  A++L + M   
Sbjct: 130 IMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLS 189

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
               D  T NT ++GLC    + EAV+L   +    C+ +   Y  +++ +CKSG    A
Sbjct: 190 QHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASA 249

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           L+L R +  R +   VVTY I+I  LC DG++D A   F +ME   +  NV  + +LI  
Sbjct: 250 LDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGS 309

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           F    +     +LL  M  +K+ P+    S ++D L
Sbjct: 310 FCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSL 345


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  270 bits (690), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 137/349 (39%), Positives = 216/349 (61%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + +PN V YNTIID +CK   V++A  L+ +M  + I+PDVVTYN+LI G C      
Sbjct: 205 GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMK 264

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  LF +M+ + + P+V TFN+++D  CK  ++ EA  +L +M+++ ++P+ FTY++LM
Sbjct: 265 DATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLM 324

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           D +CL  ++N+A+ +F ++   G   +  SY+I+I+G+CK K+V+EA++L++EM    I 
Sbjct: 325 DRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNII 384

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTYN+L  GL ++ ++ +ALKL +EM    V  D  TYN+ +D LCKN  + +A+ L
Sbjct: 385 PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIAL 444

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +     + DI  Y  L+DGLCK+GRLE A  +F  L  +  + DV  Y  MI G C+
Sbjct: 445 LTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCS 504

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            G  D++ DL   MEEN   PN + +  +I      ++  K  +LL +M
Sbjct: 505 HGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREM 553



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 204/359 (56%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V+Y T+I+GLCK G    A  L  ++ G+ + P+VV YN++I  +C     NEA  L+
Sbjct: 176 NKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLY 235

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ +G+ P VVT+N ++   C  GKM +A+ L + M+  ++ PN +T++ L+DGFC  
Sbjct: 236 SEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKE 295

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            ++  A+ +   M   G K D  +YN L++ YC  KEV +A  ++  +  +G+ P + +Y
Sbjct: 296 RRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSY 355

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + +  G  +I +V+ A+ LF+EM  +++  D  TYN+ IDGLCK G I  A++L   +  
Sbjct: 356 SIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHD 415

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D   YN ++D LCK+ +++ A+ L   +    +  D+ TY  ++ GLC +G+++ 
Sbjct: 416 RGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLED 475

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A  +F D+       +V I+  +I GF       + ++LL KM+E   +P+A    +++
Sbjct: 476 ARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIII 534



 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 185/331 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +T  T+I GLC +G + +A     ++     + + V+Y +LI+GLC     + A +
Sbjct: 139 EPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQ 198

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   +  + VQP+VV +N I+D +CK   ++EA  L   MV + + P+  TY+ L+ GFC
Sbjct: 199 LLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFC 258

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + GK+  A +LF  M       +  ++NIL++G+CK + ++EA ++   M+ +GIKP V 
Sbjct: 259 IVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVF 318

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L      + +V  A  +F  + +  V  +  +Y+  I G CK   + EA+ LF+ +
Sbjct: 319 TYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEM 378

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D+  YN LIDGLCK G++  AL+L   +  R +  D +TYN ++  LC + Q+
Sbjct: 379 HCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQV 438

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           DKA  L   M++  + P++  + TL+ G  +
Sbjct: 439 DKAIALLTKMKDEGIQPDICTYTTLVDGLCK 469



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 189/364 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+   +  I+  L K        +L  QM+   I  D+V  + LI+          +  
Sbjct: 69  KPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFS 128

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +++  G +P+V+T   ++  LC  G++ +A +  D +V      N  +Y TL++G C
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLC 188

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+ + A +L   ++    + + V YN +I+  CK K V EA  LY EMVSKGI P VV
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 248

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L  G   + +++ A  LF +M  +++  +  T+N  +DG CK   + EA  +   +
Sbjct: 249 TYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMM 308

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D+  YN L+D  C    +  A  +F ++ +R +  ++ +Y+IMIHG C   ++
Sbjct: 309 MKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKV 368

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A +LF +M  N + P+V+ + +LI G  ++ K S  ++L+ +M ++ V  D    + +
Sbjct: 369 DEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSI 428

Query: 373 VDLL 376
           +D L
Sbjct: 429 LDAL 432



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 177/326 (54%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P+V+T  +LI GLC     ++A +   +++  G   + V++  +++ LCK G+   A +L
Sbjct: 140 PNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQL 199

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
           L  +  + V+PN   Y+T++D  C    +N A +L+  M S G   D V+YN LI+G+C 
Sbjct: 200 LRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCI 259

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             ++++A  L+ +M+ + I P V T+N L  G  +  +++ A  +   M +  +  D  T
Sbjct: 260 VGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFT 319

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           YN+ +D  C    + +A  +F T+       +I +Y+ +I G CK  +++ A+ LF+ + 
Sbjct: 320 YNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMH 379

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
              ++ DVVTYN +I GLC  G++  A  L  +M +  V  + I + +++    + ++  
Sbjct: 380 CNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVD 439

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVD 374
           K I LL KMK++ + PD    + +VD
Sbjct: 440 KAIALLTKMKDEGIQPDICTYTTLVD 465



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 153/279 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T+N ++DG CKE  + +AK +   M  + I PDV TYNSL+   C   + N+AK +
Sbjct: 280 PNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHI 339

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  +  +GV P++ ++++++   CK  K+DEA  L   M   ++ P+  TY++L+DG C 
Sbjct: 340 FNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCK 399

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GKI+ A +L   M   G  HD ++YN +++  CKN +V++A++L  +M  +GI+P + T
Sbjct: 400 LGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICT 459

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  GL +  ++E A  +FE++       D + Y   I G C +G   E+++L   + 
Sbjct: 460 YTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKME 519

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
              C  +   Y  +I  L      + A +L R +  R L
Sbjct: 520 ENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 168/330 (50%)

Query: 45  ENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDE 104
           +N  P +  +  ++  L  +N ++    L  +M   G+   +V  +++++   + G+   
Sbjct: 66  KNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPL 125

Query: 105 ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
           +  +L  +++    PN  T +TL+ G CL G+I++A +    + ++G   + VSY  LIN
Sbjct: 126 SFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLIN 185

Query: 165 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAA 224
           G CK  +   AL L R +  K ++P VV YNT+   + ++  V  A  L+ EM    ++ 
Sbjct: 186 GLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISP 245

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           D  TYN  I G C  G + +A +LF  +       ++  +N L+DG CK  RL+ A  + 
Sbjct: 246 DVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVL 305

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
             + ++ +  DV TYN ++   C   +++KA  +F  + +  V PN+  +  +IHGF +I
Sbjct: 306 AMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKI 365

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            K  + + L  +M    ++PD    + ++D
Sbjct: 366 KKVDEAMNLFKEMHCNNIIPDVVTYNSLID 395



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 134/276 (48%)

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           + K +  S    L+ Q++ +P+ F +  ++     +   +    L   ME  G   D V 
Sbjct: 50  DNKHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVI 109

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
            +ILIN + +  +   + S+  +++  G +P V+T  TL  GL    Q+  AL+  +++ 
Sbjct: 110 LSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVV 169

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                 +  +Y T I+GLCK G    A++L R +     + ++  YN +ID +CK   + 
Sbjct: 170 ALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 229

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +L+  +  + +  DVVTYN +I G C  G+M  A DLF  M    + PNV  F  L+
Sbjct: 230 EAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILV 289

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            GF +  +  +   +L  M ++ + PD    + ++D
Sbjct: 290 DGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMD 325



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 58/103 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TY T++DGLCK G ++ A+ +F  +  +    DV  Y ++I G C    ++E+  
Sbjct: 454 QPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLD 513

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           L  +M + G  P+ VT+ +I+  L    + D+A +LL  M+ R
Sbjct: 514 LLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITR 556


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 135/364 (37%), Positives = 211/364 (57%), Gaps = 11/364 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V YNTIIDGL K+G    A  LF++M+ + I PD+VTYN +I+G C +  W++A++L
Sbjct: 251 PNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQL 310

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+++ + P VVTF+ +++   K GK  EA  L D M+ R + P+  TYS+++DGFC 
Sbjct: 311 LQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCK 370

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +++ AE +F    + GC  D +++N LI GYC+ K V++ + L  EM   G+    +T
Sbjct: 371 QNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTIT 430

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G  ++  +  A  L +EM    V  +  T NT +DGLC NG + +A+E+F+ + 
Sbjct: 431 YTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 254 ILK-----------CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
             K            E D+Q YN LI GL   G+   A EL+  +P R +V D +TY+ M
Sbjct: 491 KSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I GLC   ++D+A  +F  M   + +P+V+ F TLI G+ +       +EL  +M ++ +
Sbjct: 551 IDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGI 610

Query: 363 MPDA 366
           + DA
Sbjct: 611 VADA 614



 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 195/356 (54%), Gaps = 11/356 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT++ +I+   KEG   +A+ L+ +M   +I P  VTY+S+I G C  N  + A+ +
Sbjct: 321 PDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHM 380

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F+    +G  P ++TFN ++   C+  ++D+  +LL  M +  +  N  TY+TL+ GFC 
Sbjct: 381 FYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQ 440

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-------- 185
            G +N A++L   M S G   + V+ N L++G C N ++++AL +++ M           
Sbjct: 441 VGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASR 500

Query: 186 ---GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
              G++P V TYN L  GL    +   A +L+EEM    +  DT TY++ IDGLCK   +
Sbjct: 501 PFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 560

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            EA ++F ++G      D+  +N LI G CK+G ++  LELF  + +R +VAD +TY  +
Sbjct: 561 DEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITL 620

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           I+G      +D A D+F +M  + V P+ I    ++ G     +  + + +L  ++
Sbjct: 621 IYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/355 (33%), Positives = 188/355 (52%), Gaps = 5/355 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VT+NT++ GLC E  + +A  LF QM      P+VVT+ +L++GLC      EA  L
Sbjct: 149 PTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVAL 204

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ-RDVRPNAFTYSTLMDGFC 132
              M++ G+QP+ +T+  I+D +CK G    A  LL  M +   + PN   Y+T++DG  
Sbjct: 205 LDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLW 264

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+ + A  LF  M+      D V+YN +ING+C +    +A  L +EM+ + I P VV
Sbjct: 265 KDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVV 324

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++ L     +  +   A +L++EM    +   T TY++ IDG CK   +  A  +F   
Sbjct: 325 TFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLT 384

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  DI  +N LI G C++ R++  ++L   +    LVA+ +TY  +IHG C  G +
Sbjct: 385 PTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDL 444

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           + A DL  +M  + V PNV+   TL+ G     K    +E+   M++ K+  DAS
Sbjct: 445 NAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDAS 499



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 184/363 (50%), Gaps = 5/363 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  ++  ++   C    +  A + F ++     +P VVT+N+L+HGLC  +  +EA  LF
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLF 174

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M     +P+VVTF  +M+ LC+ G++ EA  LLD M++  ++PN  TY T++DG C  
Sbjct: 175 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 230

Query: 135 GKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           G    A  L   ME +     + V YN +I+G  K+    +A +L+ EM  K I P +VT
Sbjct: 231 GDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVT 290

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  G     +   A +L +EM    +  D  T++  I+   K G   EA EL+  + 
Sbjct: 291 YNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEML 350

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                     Y+ +IDG CK  RL+ A  +F   P +    D++T+N +I G C   ++D
Sbjct: 351 PRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVD 410

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
               L  +M E  +  N I + TLIHGF ++   +   +LL +M    V P+    + ++
Sbjct: 411 DGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLL 470

Query: 374 DLL 376
           D L
Sbjct: 471 DGL 473



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 176/347 (50%), Gaps = 5/347 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + +  ++  + + G  D   +L  +M+   +  +  ++  L+   C  +    A   
Sbjct: 79  PSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALST 138

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F ++   G  P+VVTFN ++  LC   ++ EA   LDL  Q   +PN  T++TLM+G C 
Sbjct: 139 FGKITKLGFHPTVVTFNTLLHGLCVEDRISEA---LDLFHQM-CKPNVVTFTTLMNGLCR 194

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIKPTVV 192
            G++  A  L   M   G + + ++Y  +++G CK  +   AL+L R+M     I P VV
Sbjct: 195 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVV 254

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YNT+  GL++  +   A  LF EMQ  ++  D  TYN  I+G C +G   +A +L + +
Sbjct: 255 IYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEM 314

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K   D+  ++ LI+   K G+   A EL+  +  R ++   VTY+ MI G C   ++
Sbjct: 315 LERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRL 374

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           D A  +F        +P++I F TLI G+ R  +    I+LLH+M E
Sbjct: 375 DAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTE 421



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 145/291 (49%), Gaps = 11/291 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +T+NT+I G C+   VD    L  +M    +  + +TY +LIHG C   D N A+
Sbjct: 389 CSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQ 448

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-----------VRPN 120
            L  EM+  GV P+VVT N ++D LC NGK+ +A  +   M +             V P+
Sbjct: 449 DLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPD 508

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY+ L+ G    GK   AEEL+  M   G   D ++Y+ +I+G CK   ++EA  ++ 
Sbjct: 509 VQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 568

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            M SK   P VVT+NTL  G  +   V+  L+LF EM +  + AD  TY T I G  K  
Sbjct: 569 SMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVD 628

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            I  A+++F+ +       D      ++ GL     LE A+ +   L   V
Sbjct: 629 NIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQMSV 679



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 158/319 (49%), Gaps = 5/319 (1%)

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
           L  G       ++A  LF  M+     PSV+ F  +M  + + G+ D    L   M    
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           +  NA++++ LM  FC   K+  A   FG +  +G     V++N L++G C    + EAL
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            L+ +M     KP VVT+ TL  GL    +V  A+ L + M  D +  +  TY T +DG+
Sbjct: 172 DLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 237 CKNGYIVEAVELFRTLG-ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           CK G  V A+ L R +  +     ++  YN +IDGL K GR   A  LF  +  + +  D
Sbjct: 228 CKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPD 287

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           +VTYN MI+G C  G+   A  L  +M E  + P+V+ F  LI+ FV+  K  +  EL  
Sbjct: 288 IVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYD 347

Query: 356 KMKEKKVMPDASIVSMVVD 374
           +M  + ++P     S ++D
Sbjct: 348 EMLPRSIIPSTVTYSSMID 366



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 124/219 (56%), Gaps = 12/219 (5%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-----------NINPDVVTYNSLIH 59
           VC PN VT NT++DGLC  G +  A  +F  M+              + PDV TYN LI 
Sbjct: 459 VC-PNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILIC 517

Query: 60  GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
           GL +   + EA+ L+ EM  +G+ P  +T++ ++D LCK  ++DEA+++ D M  +   P
Sbjct: 518 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 577

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           +  T++TL+ G+C  G ++   ELF  M   G   D ++Y  LI G+ K   ++ AL ++
Sbjct: 578 DVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIF 637

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +EM+S G+ P  +T   +  GL+   ++E A+ + E++Q
Sbjct: 638 QEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 138/363 (38%), Positives = 215/363 (59%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  +I  LCK G V+ A   F QM  E ++P  + YNSLIHGLC  N W  A+ L
Sbjct: 296 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 355

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+D+G+  + + FN I+D  CK G++ E+ +L DLMV+  V+P+  TYSTL+DG+CL
Sbjct: 356 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCL 415

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A +L  SM S+G K D V+Y+ LINGYCK   +++AL L+REM S G+ P ++T
Sbjct: 416 AGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIIT 475

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GLF+  +   A +L+  + +     + STYN  + GLCKN    +A+ +F+ L 
Sbjct: 476 YNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLC 535

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           ++  +L+ + +N +ID L K GR + A +LF +     LV +  TY +M   +   G ++
Sbjct: 536 LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 595

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +   LFL ME+N    +  +   ++   ++  + ++    L  + EK    +AS  S+ +
Sbjct: 596 ELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI 655

Query: 374 DLL 376
           DLL
Sbjct: 656 DLL 658



 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 121/353 (34%), Positives = 189/353 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PN VTYN+II  LCK   VDKA  +   M    + PD +TYNS++HG C +    EA  
Sbjct: 120 SPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIV 179

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +M   GV+P VVT+N +MD LCKNG+  EA ++ D M +R ++P   TY TL+ G+ 
Sbjct: 180 FLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYA 239

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +     L   M   G   +   ++IL+  Y K ++VEEA+ ++ +M  +G+ P  V
Sbjct: 240 TKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAV 299

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  +   L +  +VE A+  FE+M  + ++     YN+ I GLC       A EL   +
Sbjct: 300 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 359

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 L+   +N +ID  CK GR+  + +LF  + R  +  D++TY+ +I G C  G+M
Sbjct: 360 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 419

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           D+A  L   M    + P+ + + TLI+G+ +I++    + L  +M+   V PD
Sbjct: 420 DEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPD 472



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 186/340 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TYN+I+ G C  G   +A     +M+ + + PDVVTYNSL+  LC      EA+++
Sbjct: 156 PDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKI 215

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M  +G++P + T+  ++      G + E   LLDLMV+  + PN + +S L+  +  
Sbjct: 216 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAK 275

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+  A  +F  M   G   + V+Y  +I   CK+  VE+A+  + +M+ +G+ P  + 
Sbjct: 276 QEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIV 335

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L  GL   ++ E A +L  EM    +  +T  +N+ ID  CK G ++E+ +LF  + 
Sbjct: 336 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 395

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  + DI  Y+ LIDG C +G+++ A +L  S+    +  D VTY+ +I+G C   +M 
Sbjct: 396 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMK 455

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            A  LF +ME + V+P++I +  ++ G  +  + +   EL
Sbjct: 456 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 495



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 199/362 (54%), Gaps = 4/362 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   ++ ++    K+  V++A  +F +M+ + +NP+ VTY ++I  LC +    +A   
Sbjct: 261 PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 320

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+D+G+ P  + +N ++  LC   K + A  L+  M+ R +  N   +++++D  C 
Sbjct: 321 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 380

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  +E+LF  M  +G K D ++Y+ LI+GYC   +++EA  L   MVS G+KP  VT
Sbjct: 381 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 440

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+TL  G  +I +++ AL LF EM+   V+ D  TYN  + GL +      A EL+  +G
Sbjct: 441 YSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELY--VG 498

Query: 254 ILKC--ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           I K   +L++  YN ++ GLCK+   + AL +F++L    L  +  T+NIMI  L   G+
Sbjct: 499 ITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGR 558

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D+A DLF+    N + PN   +  +    +      ++ +L   M++     D+ +++ 
Sbjct: 559 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 618

Query: 372 VV 373
           +V
Sbjct: 619 IV 620



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 147/276 (53%), Gaps = 3/276 (1%)

Query: 103 DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG--CKHDDVSYN 160
           ++A  + D +++R + P+ F+Y+ L++G C   +   A EL   M   G  C  D VSY+
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            +ING+ K  ++++  S Y EM+ + I P VVTYN++   L +   V+ A+++   M + 
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            V  D  TYN+ + G C +G   EA+   + +     E D+  YN L+D LCK+GR   A
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            ++F S+ +R L  ++ TY  ++ G    G + + H L   M  N + PN  +F  L+  
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + +  K  + + +  KM+++ + P+A     V+ +L
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGIL 308



 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 111/234 (47%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V  KP+ VTY+T+I+G CK   +  A  LF +M+   ++PD++TYN ++ GL      
Sbjct: 430 VSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 489

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             AK L+  +   G Q  + T+N+I+  LCKN   D+A R+   +   D++  A T++ +
Sbjct: 490 AAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIM 549

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D     G+ + A++LF +  S G   +  +Y ++         +EE   L+  M   G 
Sbjct: 550 IDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 609

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
                  N +   L +  ++  A      +     + + ST + FID L    Y
Sbjct: 610 TVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 663


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  269 bits (687), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 137/359 (38%), Positives = 214/359 (59%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N VTY+T+I  LCK   V++A  +F  MK ++I+P + TY SLI GLC+ + W EA 
Sbjct: 111 CQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEAS 170

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM    + P+VVTFNV++D  CK GK+  A  +L  M +  V P+  TY++LM G+
Sbjct: 171 ALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGY 230

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            +  ++  A +LF  M + GCK D  SY+ILINGYCK K ++EA  L+ EM+ +G  P  
Sbjct: 231 SMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNN 290

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+YNTL  GL ++ ++  A  LF+ M  +    +  TY   +DG CK GY+ +A  LFR 
Sbjct: 291 VSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRA 350

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + ++  YN L++ +CKSG L+ A ELF  L    L  +V  Y  +I+GLC +G 
Sbjct: 351 MQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGL 410

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +D+A + F +ME++   P+   +  +I GF++    S+ + L+ +M+++  + DA   +
Sbjct: 411 LDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGTTA 469



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 194/388 (50%), Gaps = 35/388 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VT+ T+I+GL K G   +A  LF  M      PD  TY ++I+GLC   +   A  
Sbjct: 42  QPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAG 101

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF +M + G Q +VVT++ ++  LCK  +++EA  +   M  +D+ P  FTY++L+ G C
Sbjct: 102 LFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLC 161

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +   A  L   M S+    + V++N+L++ +CK  +V  A  + + M   G++P VV
Sbjct: 162 NFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVV 221

Query: 193 TYNTLFLG------------LFEI-----------------------HQVEHALKLFEEM 217
           TYN+L  G            LF++                        +++ A +LF EM
Sbjct: 222 TYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEM 281

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
                  +  +YNT I GLC+ G + EA +LF+ +       ++  Y  L+DG CK G L
Sbjct: 282 IHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYL 341

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A  LFR++    L  ++V YNI+++ +C  G +  A +LF ++    + PNV I+ T+
Sbjct: 342 GKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTI 401

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPD 365
           I+G  +     + +E    M++    PD
Sbjct: 402 INGLCKEGLLDEALEAFRNMEDDGCPPD 429



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 185/370 (50%), Gaps = 35/370 (9%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           M+   ++P+  T N LI+  C     +    +  + +  G+QP++VTF  +++ L K GK
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
             +A  L D MV R  +P+ +TY+T+++G C  G+   A  LF  ME  GC+ + V+Y+ 
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LI+  CK + V EAL ++  M +K I PT+ TY +L  GL    + + A  L  EM   +
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 222 VAADTSTYNTFIDGLCKNGYI-----------------------------------VEAV 246
           +  +  T+N  +D  CK G +                                   VEA 
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +LF  +    C+ D+ +Y+ LI+G CK+ R++ A +LF  +  +    + V+YN +IHGL
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C  G++ +A DLF +M  N   PN+  +  L+ GF +     K   L   M+   + P+ 
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 360

Query: 367 SIVSMVVDLL 376
            + +++V+ +
Sbjct: 361 VMYNILVNAM 370


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  268 bits (684), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 135/363 (37%), Positives = 213/363 (58%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  +I  LCK G VD A   F QM  E + P+++ Y SLIH LC  + W++A+ L
Sbjct: 404 PNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEEL 463

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+D+G+  + + FN I+   CK G++ E+ +L DLMV+  V+PN  TYSTL+DG+CL
Sbjct: 464 ILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCL 523

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A +L  SM S+G K D V+YN LINGYC+   +++AL+L++EMVS G+ P ++T
Sbjct: 524 AGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 583

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GLF   +   A +L+  + +     + STYN  + GLCKN    EA+ +F+ L 
Sbjct: 584 YNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 643

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   +L+ + +N +I  L K GR + A +LF +     LV +  TY +M   +   G ++
Sbjct: 644 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +   LF  ME+N    +  +   ++   ++  + ++    L  + EK    +AS  S+ +
Sbjct: 704 ELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI 763

Query: 374 DLL 376
           DLL
Sbjct: 764 DLL 766



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 187/376 (49%), Gaps = 35/376 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ VTY++II  LCK   +DKA  +   M    + P+ +TYNS++HG C +    EA  
Sbjct: 228 SPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIG 287

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +M   GV+P VVT+N +MD LCKNG+  EA ++ D M +R + P+  TY TL+ G+ 
Sbjct: 288 FLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYA 347

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +     L   M   G   D   +NILI  Y K ++V+EA+ ++ +M   G+ P VV
Sbjct: 348 TKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVV 407

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL---------------- 236
           TY  +   L +   V+ A+  FE+M  + +  +   Y + I  L                
Sbjct: 408 TYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM 467

Query: 237 -------------------CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
                              CK G ++E+ +LF  +  +  + ++  Y+ LIDG C +G++
Sbjct: 468 LDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKM 527

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A +L  S+    +  D VTYN +I+G C   +MD A  LF +M  + V+PN+I +  +
Sbjct: 528 DEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 587

Query: 338 IHGFVRINKPSKVIEL 353
           + G     + +   EL
Sbjct: 588 LQGLFHTRRTAAAKEL 603



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 195/360 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   +N +I    K+  VD+A  +F +M+   +NP+VVTY ++I  LC +   ++A   
Sbjct: 369 PDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLY 428

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+D+G+ P+++ +  ++  LC   K D+A  L+  M+ R +  N   +++++   C 
Sbjct: 429 FEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCK 488

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  +E+LF  M  +G K + ++Y+ LI+GYC   +++EA  L   M S G+KP  VT
Sbjct: 489 EGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVT 548

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G   + +++ AL LF+EM    V+ +  TYN  + GL        A EL+  + 
Sbjct: 549 YNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGIT 608

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +L++  YN ++ GLCK+   + AL +F++L    L  +  T+NIMI  L   G+ D
Sbjct: 609 KSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 668

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A DLF+    N + PN   +  +    +      ++ +L   M++     D+ +++ +V
Sbjct: 669 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIV 728



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 180/366 (49%), Gaps = 3/366 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM---KGENINPDVVTYNSLIHGLCHANDWN 68
           C P+  +   ++ GLC E    +A  L   M   +G    PDVV+Y ++I+G     D +
Sbjct: 154 CMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSD 213

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A   + EM+D+ + P VVT++ I+  LCK   MD+A  +L  MV+  V PN  TY++++
Sbjct: 214 KAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSIL 273

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G+C + +   A      M S G + D V+YN L++  CKN    EA  ++  M  +G++
Sbjct: 274 HGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLE 333

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P + TY TL  G      +     L + M R+ +  D   +N  I    K   + EA+ +
Sbjct: 334 PDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLV 393

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +       ++  Y  +I  LCKSG ++ A+  F  +    L  +++ Y  +IH LC 
Sbjct: 394 FSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCI 453

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
             + DKA +L L+M +  +  N I F ++IH   +  +  +  +L   M    V P+   
Sbjct: 454 FDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVIT 513

Query: 369 VSMVVD 374
            S ++D
Sbjct: 514 YSTLID 519



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 187/388 (48%), Gaps = 35/388 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC--------HA 64
           +P+ VTYN+++D LCK G   +A+ +F  M    + PD+ TY +L+ G          HA
Sbjct: 298 EPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHA 357

Query: 65  ---------------------------NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
                                         +EA  +F +M   G+ P+VVT+  ++  LC
Sbjct: 358 LLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILC 417

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K+G +D+A    + M+   + PN   Y++L+   C+  K ++AEEL   M   G   + +
Sbjct: 418 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTI 477

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            +N +I+ +CK   V E+  L+  MV  G+KP V+TY+TL  G     +++ A KL   M
Sbjct: 478 FFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
               +  D  TYNT I+G C+   + +A+ LF+ +       +I  YN ++ GL  + R 
Sbjct: 538 FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 597

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A EL+  + +     ++ TYNI++HGLC +   D+A  +F ++    +      F  +
Sbjct: 598 AAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 657

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPD 365
           I   +++ +  +  +L        ++P+
Sbjct: 658 IGALLKVGRNDEAKDLFVAFSSNGLVPN 685



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 173/388 (44%), Gaps = 39/388 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TY  +I   C+ G +D   A    +  +    + +T+  L+ GLC     ++A  +
Sbjct: 85  PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR---DVRPNAFTYSTLMD 129
               M +    P V +  +++  LC   +  EA  LL +M         P+  +Y+T+++
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GF   G  ++A   +  M       D V+Y+ +I   CK + +++A+ +   MV  G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             +TYN++  G     Q + A+   ++M+ D V  D  TYN+ +D LCKNG   EA ++F
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSG---------------------------------- 275
            ++     E DI  Y  L+ G    G                                  
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 276 -RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            +++ A+ +F  + +  L  +VVTY  +I  LC  G +D A   F  M +  + PN+I++
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKV 362
            +LIH     +K  K  EL+ +M ++ +
Sbjct: 445 TSLIHSLCIFDKWDKAEELILEMLDRGI 472



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 4/334 (1%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           + P V TY  LI   C A   +        ++ +G +   +TF  ++  LC + +  +A 
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 107 RL-LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM---ESMGCKHDDVSYNIL 162
            + L  M +    P+ F+ + L+ G C   +   A EL   M      G   D VSY  +
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           ING+ K  + ++A S Y EM+ + I P VVTY+++   L +   ++ A+++   M ++ V
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
             +  TYN+ + G C +    EA+   + +     E D+  YN L+D LCK+GR   A +
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           +F S+ +R L  D+ TY  ++ G    G + + H L   M  N + P+  +F  LI  + 
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +  K  + + +  KM++  + P+      V+ +L
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGIL 416



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 131/284 (46%), Gaps = 6/284 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            IGV  KPN +TY+T+IDG C  G +D+A  L   M    + PD VTYN+LI+G C  + 
Sbjct: 504 RIGV--KPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSR 561

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            ++A  LF EM+  GV P+++T+N+I+  L    +   A  L   + +   +    TY+ 
Sbjct: 562 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNI 621

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ G C     + A  +F ++     + +  ++NI+I    K    +EA  L+    S G
Sbjct: 622 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNG 681

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P   TY  +   +     +E   +LF  M+ +    D+   N  +  L + G I  A 
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAG 741

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
                +      L+    +  ID L   G+ +   E  R LP +
Sbjct: 742 TYLSMIDEKHFSLEASTASLFID-LLSGGKYQ---EYHRFLPEK 781


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  268 bits (684), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 201/318 (63%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + N V Y+T+ID LCK    D A  LF +M+ + + P+V+TY+SLI  LC+   W++A R
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR 316

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+++ + P+VVTFN ++D   K GK+ EA +L D M++R + P+ FTYS+L++GFC
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  +++ A+ +F  M S  C  + V+YN LING+CK K ++E + L+REM  +G+    V
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  G F+    ++A  +F++M  D V  +  TYNT +DGLCKNG + +A+ +F  L
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K E  I  YN +I+G+CK+G++E   +LF SL  + +  DV+ YN MI G C  G  
Sbjct: 497 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLK 556

Query: 313 DKAHDLFLDMEENAVAPN 330
           ++A  LF  M E+   P+
Sbjct: 557 EEADALFRKMREDGPLPD 574



 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 195/362 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT +++++G C    +  A AL  QM      PD +T+ +LIHGL   N  +EA  
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+ +G QP++VT+ V+++ LCK G +D A  LL+ M    +  N   YST++D  C
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC 271

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                + A  LF  ME+ G + + ++Y+ LI+  C  +   +A  L  +M+ + I P VV
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV 331

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N L     +  ++  A KL++EM +  +  D  TY++ I+G C +  + EA  +F  +
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  ++  YN LI+G CK+ R++  +ELFR + +R LV + VTY  +IHG       
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  +F  M  + V PN++ + TL+ G  +  K  K + +   ++  K+ P     +++
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511

Query: 373 VD 374
           ++
Sbjct: 512 IE 513



 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 191/362 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  TYN +I+  C+   +  A AL  +M      P +VT +SL++G CH    ++A  L 
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M++ G +P  +TF  ++  L  + K  EA  L+D MVQR  +PN  TY  +++G C  
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G I+ A  L   ME+   + + V Y+ +I+  CK +  ++AL+L+ EM +KG++P V+TY
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           ++L   L    +   A +L  +M    +  +  T+N  ID   K G +VEA +L+  +  
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + DI  Y+ LI+G C   RL+ A  +F  +  +    +VVTYN +I+G C   ++D+
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +LF +M +  +  N + + TLIHGF +         +  +M    V P+    + ++D
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478

Query: 375 LL 376
            L
Sbjct: 479 GL 480



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 163/321 (50%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           Y  ++    H+   ++A  LF  M+     PS+  FN ++  + K  K D    L + M 
Sbjct: 53  YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
           +  +  N +TY+ L++ FC   +I+ A  L G M  +G +   V+ + L+NGYC  K + 
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           +A++L  +MV  G +P  +T+ TL  GLF  ++   A+ L + M +     +  TY   +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
           +GLCK G I  A  L   +   K E ++  Y+ +ID LCK    + AL LF  +  + + 
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            +V+TY+ +I  LCN  +   A  L  DM E  + PNV+ F  LI  FV+  K  +  +L
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352

Query: 354 LHKMKEKKVMPDASIVSMVVD 374
             +M ++ + PD    S +++
Sbjct: 353 YDEMIKRSIDPDIFTYSSLIN 373



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 174/364 (47%), Gaps = 35/364 (9%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D A  LF  M      P +  +N L+  +     ++    L  +M   G+  ++ T+N+
Sbjct: 66  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C+  ++  A  LL  M++    P+  T S+L++G+C   +I+ A  L   M  MG
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + D +++  LI+G   + +  EA++L   MV +G +P +VTY  +  GL +   ++ A 
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL-------------GILKC- 257
            L  +M+   + A+   Y+T ID LCK  +  +A+ LF  +              ++ C 
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305

Query: 258 ---------------------ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
                                  ++  +N LID   K G+L  A +L+  + +R +  D+
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
            TY+ +I+G C   ++D+A  +F  M      PNV+ + TLI+GF +  +  + +EL  +
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425

Query: 357 MKEK 360
           M ++
Sbjct: 426 MSQR 429



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 117/215 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY+++I+G C    +D+AK +F  M  ++  P+VVTYN+LI+G C A   +E   L
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM  +G+  + VT+  ++    +    D A  +   MV   V PN  TY+TL+DG C 
Sbjct: 423 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+ +A  +F  ++    +    +YNI+I G CK  +VE+   L+  +  KG+KP V+ 
Sbjct: 483 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVII 542

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
           YNT+  G       E A  LF +M+ D    D+ T
Sbjct: 543 YNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 129/286 (45%), Gaps = 39/286 (13%)

Query: 95  ELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
           E+ +NG    K+D+A  L   MV+    P+ F ++ L+       K +    L   M+ +
Sbjct: 55  EILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G  H+  +YNILIN +C+  ++  AL+L  +M+  G +P++VT ++L  G     ++  A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           + L ++M       DT T+ T I GL  +    EAV                    L+D 
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-------------------ALVDR 215

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           + + G                   ++VTY ++++GLC  G +D A +L   ME   +  N
Sbjct: 216 MVQRG----------------CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAN 259

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           V+I+ T+I    +       + L  +M+ K V P+    S ++  L
Sbjct: 260 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  268 bits (684), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 138/364 (37%), Positives = 214/364 (58%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V Y+ IIDGLCK+G +D A  LF +M+ +    D++ Y +LI G C+A  W++  +
Sbjct: 244 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK 303

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ + + P VV F+ ++D   K GK+ EA  L   M+QR + P+  TY++L+DGFC
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++++A  +   M S GC  +  ++NILINGYCK   +++ L L+R+M  +G+    V
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  E+ ++E A +LF+EM    V  D  +Y   +DGLC NG   +A+E+F  +
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K ELDI  YN +I G+C + +++ A +LF SLP + +  DV TYNIMI GLC  G +
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  LF  MEE+  +PN   +  LI   +     +K  +L+ ++K      DAS +   
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFA 603

Query: 373 VDLL 376
           +  L
Sbjct: 604 LSTL 607



 Score =  228 bits (580), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 123/361 (34%), Positives = 195/361 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY  ++  +CK G    A  L  +M+   I  D V Y+ +I GLC     + A  
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN 268

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  +G +  ++ +  ++   C  G+ D+ ++LL  M++R + P+   +S L+D F 
Sbjct: 269 LFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFV 328

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  AEEL   M   G   D V+Y  LI+G+CK  ++++A  +   MVSKG  P + 
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N L  G  + + ++  L+LF +M    V ADT TYNT I G C+ G +  A ELF+ +
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   DI +Y  L+DGLC +G  E ALE+F  + +  +  D+  YNI+IHG+CN  ++
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A DLF  +    V P+V  +  +I G  +    S+   L  KM+E    P+    +++
Sbjct: 509 DDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568

Query: 373 V 373
           +
Sbjct: 569 I 569



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 205/361 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+TVT++T+I+GLC EG V +A  L  +M      P ++T N+L++GLC     ++A  
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M++ G QP+ VT+  ++  +CK+G+   A  LL  M +R ++ +A  YS ++DG C
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A  LF  ME  G K D + Y  LI G+C     ++   L R+M+ + I P VV
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            ++ L     +  ++  A +L +EM +  ++ DT TY + IDG CK   + +A  +   +
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  +I+ +N LI+G CK+  ++  LELFR +  R +VAD VTYN +I G C  G++
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A +LF +M    V P+++ +  L+ G     +P K +E+  K+++ K+  D  I +++
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498

Query: 373 V 373
           +
Sbjct: 499 I 499



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 176/342 (51%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
           D A  LF +M      P ++ ++ L   +     ++    L  +M  +G+  ++ T +++
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           ++  C+  K+  A   +  +++    P+  T+STL++G CL G+++ A EL   M  MG 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
           K   ++ N L+NG C N +V +A+ L   MV  G +P  VTY  +   + +  Q   A++
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           L  +M+   +  D   Y+  IDGLCK+G +  A  LF  + I   + DI  Y  LI G C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
            +GR +   +L R + +R +  DVV ++ +I     +G++ +A +L  +M +  ++P+ +
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            + +LI GF + N+  K   +L  M  K   P+    +++++
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 167/351 (47%), Gaps = 19/351 (5%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T+N +I+G CK   +D    LF +M    +  D VTYN+LI G C       AK
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+ + V+P +V++ +++D LC NG+ ++A  + + + +  +  +   Y+ ++ G 
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++ A +LF S+   G K D  +YNI+I G CK   + EA  L+R+M   G  P  
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN L            + KL EE++R   + D ST    +  L +             
Sbjct: 563 CTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLAR------------- 609

Query: 252 LGILKC--ELDIQAYNCLIDGLC--KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
             +LK   E D+  +  L+   C  ++  +  A  LF+++       +VVTYN +I GL 
Sbjct: 610 --MLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLL 667

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           N   + +   +   M E    PN +   T I G  + +     I LL KM+
Sbjct: 668 NGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKME 718



 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 138/274 (50%)

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K D+A  L   M +   RP    +S L      T + +   +L   ME  G  H+  + +
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           I+IN  C+ +++  A S   +++  G +P  VT++TL  GL    +V  AL+L + M   
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
                  T N  ++GLC NG + +AV L   +     + +   Y  ++  +CKSG+  +A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           +EL R +  R +  D V Y+I+I GLC DG +D A +LF +ME      ++II+ TLI G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           F    +     +LL  M ++K+ PD    S ++D
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 109/227 (48%), Gaps = 24/227 (10%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           YN II G+C    VD A  LF  +  + + PDV TYN +I GLC     +EA  LF +M 
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLD----------------------LMVQRD 116
           + G  P+  T+N+++      G   ++++L++                       M++  
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAG 614

Query: 117 VRPNAFTYSTLMDGFCL--TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
             P+ FT++TL+  FCL     +  A  LF +M++MG K + V+YN +I G      + +
Sbjct: 615 HEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQ 674

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
              +  +M  +G +P  VT +T   GL +      A+ L  +M+ D+
Sbjct: 675 VPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMENDN 721



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 3/49 (6%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNS-LIH 59
           C+PN VT +T I GLCK+       A+ L  K EN N DV T    LIH
Sbjct: 687 CQPNAVTKSTFISGLCKQDL--HGSAILLLRKMENDNEDVTTKKKILIH 733


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  267 bits (682), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 140/359 (38%), Positives = 215/359 (59%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  +I  LCK G VD A   F QM  E + P+++ Y SLIH LC  + W++A+ L
Sbjct: 404 PNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEEL 463

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+D+G+  + + FN I+   CK G++ E+ +L DLMV+  V+PN  TYSTL+DG+CL
Sbjct: 464 ILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCL 523

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A +L  SM S+G K D V+YN LINGYC+   +++AL+L++EMVS G+ P ++T
Sbjct: 524 AGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 583

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GLF   +   A +L+  + +     + STYN  + GLCKN    EA+ +F+ L 
Sbjct: 584 YNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 643

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   +L+ + +N +I  L K GR + A +LF +L    LV DV TY++M   L   G ++
Sbjct: 644 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLE 703

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +  DLFL MEEN    N  +  +++   ++    ++    L  + EK    +AS  S++
Sbjct: 704 ELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEKHFSLEASTASLL 762



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 187/376 (49%), Gaps = 35/376 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ VTY++II  LCK   +DKA  +   M    + P+ +TYNS++HG C +    EA  
Sbjct: 228 SPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIG 287

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +M   GV+P VVT+N +MD LCKNG+  EA ++ D M +R + P+  TY TL+ G+ 
Sbjct: 288 FLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYA 347

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +     L   M   G   D   +NILI  Y K ++V+EA+ ++ +M   G+ P VV
Sbjct: 348 TKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVV 407

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL---------------- 236
           TY  +   L +   V+ A+  FE+M  + +  +   Y + I  L                
Sbjct: 408 TYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM 467

Query: 237 -------------------CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
                              CK G ++E+ +LF  +  +  + ++  Y+ LIDG C +G++
Sbjct: 468 LDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKM 527

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A +L  S+    +  D VTYN +I+G C   +MD A  LF +M  + V+PN+I +  +
Sbjct: 528 DEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 587

Query: 338 IHGFVRINKPSKVIEL 353
           + G     + +   EL
Sbjct: 588 LQGLFHTRRTAAAKEL 603



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 199/362 (54%), Gaps = 4/362 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   +N +I    K+  VD+A  +F +M+   +NP+VVTY ++I  LC +   ++A   
Sbjct: 369 PDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLY 428

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+D+G+ P+++ +  ++  LC   K D+A  L+  M+ R +  N   +++++   C 
Sbjct: 429 FEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCK 488

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  +E+LF  M  +G K + ++Y+ LI+GYC   +++EA  L   M S G+KP  VT
Sbjct: 489 EGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVT 548

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G   + +++ AL LF+EM    V+ +  TYN  + GL        A EL+  +G
Sbjct: 549 YNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELY--VG 606

Query: 254 ILKC--ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           I K   +L++  YN ++ GLCK+   + AL +F++L    L  +  T+NIMI  L   G+
Sbjct: 607 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 666

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D+A DLF  +  N + P+V  +  +    +      ++ +L   M+E     ++ +++ 
Sbjct: 667 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 726

Query: 372 VV 373
           +V
Sbjct: 727 IV 728



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 180/366 (49%), Gaps = 3/366 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM---KGENINPDVVTYNSLIHGLCHANDWN 68
           C P+  +   ++ GLC E    +A  L   M   +G    PDVV+Y ++I+G     D +
Sbjct: 154 CMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSD 213

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A   + EM+D+ + P VVT++ I+  LCK   MD+A  +L  MV+  V PN  TY++++
Sbjct: 214 KAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSIL 273

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G+C + +   A      M S G + D V+YN L++  CKN    EA  ++  M  +G++
Sbjct: 274 HGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLE 333

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P + TY TL  G      +     L + M R+ +  D   +N  I    K   + EA+ +
Sbjct: 334 PDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLV 393

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +       ++  Y  +I  LCKSG ++ A+  F  +    L  +++ Y  +IH LC 
Sbjct: 394 FSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCI 453

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
             + DKA +L L+M +  +  N I F ++IH   +  +  +  +L   M    V P+   
Sbjct: 454 FDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVIT 513

Query: 369 VSMVVD 374
            S ++D
Sbjct: 514 YSTLID 519



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 192/397 (48%), Gaps = 35/397 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC--------HA 64
           +P+ VTYN+++D LCK G   +A+ +F  M    + PD+ TY +L+ G          HA
Sbjct: 298 EPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHA 357

Query: 65  ---------------------------NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
                                         +EA  +F +M   G+ P+VVT+  ++  LC
Sbjct: 358 LLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILC 417

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K+G +D+A    + M+   + PN   Y++L+   C+  K ++AEEL   M   G   + +
Sbjct: 418 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTI 477

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            +N +I+ +CK   V E+  L+  MV  G+KP V+TY+TL  G     +++ A KL   M
Sbjct: 478 FFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
               +  D  TYNT I+G C+   + +A+ LF+ +       +I  YN ++ GL  + R 
Sbjct: 538 FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 597

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A EL+  + +     ++ TYNI++HGLC +   D+A  +F ++    +      F  +
Sbjct: 598 AAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 657

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           I   +++ +  +  +L   +    ++PD    S++ +
Sbjct: 658 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAE 694



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 173/388 (44%), Gaps = 39/388 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TY  +I   C+ G +D   A    +  +    + +T+  L+ GLC     ++A  +
Sbjct: 85  PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR---DVRPNAFTYSTLMD 129
               M +    P V +  +++  LC   +  EA  LL +M         P+  +Y+T+++
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GF   G  ++A   +  M       D V+Y+ +I   CK + +++A+ +   MV  G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             +TYN++  G     Q + A+   ++M+ D V  D  TYN+ +D LCKNG   EA ++F
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSG---------------------------------- 275
            ++     E DI  Y  L+ G    G                                  
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 276 -RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            +++ A+ +F  + +  L  +VVTY  +I  LC  G +D A   F  M +  + PN+I++
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKV 362
            +LIH     +K  K  EL+ +M ++ +
Sbjct: 445 TSLIHSLCIFDKWDKAEELILEMLDRGI 472



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 4/334 (1%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           + P V TY  LI   C A   +        ++ +G +   +TF  ++  LC + +  +A 
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 107 RL-LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM---ESMGCKHDDVSYNIL 162
            + L  M +    P+ F+ + L+ G C   +   A EL   M      G   D VSY  +
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           ING+ K  + ++A S Y EM+ + I P VVTY+++   L +   ++ A+++   M ++ V
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
             +  TYN+ + G C +    EA+   + +     E D+  YN L+D LCK+GR   A +
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           +F S+ +R L  D+ TY  ++ G    G + + H L   M  N + P+  +F  LI  + 
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +  K  + + +  KM++  + P+      V+ +L
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGIL 416



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 121/239 (50%), Gaps = 2/239 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            IGV  KPN +TY+T+IDG C  G +D+A  L   M    + PD VTYN+LI+G C  + 
Sbjct: 504 RIGV--KPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSR 561

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            ++A  LF EM+  GV P+++T+N+I+  L    +   A  L   + +   +    TY+ 
Sbjct: 562 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNI 621

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ G C     + A  +F ++     + +  ++NI+I    K    +EA  L+  + + G
Sbjct: 622 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANG 681

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           + P V TY+ +   L E   +E    LF  M+ +   A++   N+ +  L + G I  A
Sbjct: 682 LVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 740


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  266 bits (681), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 138/349 (39%), Positives = 212/349 (60%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + +PN V YNTIID +CK   V++A  L+ +M  + I+PDVVTY++LI G C     N
Sbjct: 189 GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLN 248

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  LF +M+ + + P V TF++++D  CK G++ EA  +L +M+++ ++P+  TY +LM
Sbjct: 249 DAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLM 308

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+CL  ++N+A+ +F +M   G   +  SYNI+ING+CK K+V+EA++L++EM  K I 
Sbjct: 309 DGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNII 368

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTYN+L  GL +  ++ +ALKL +EM    V  D  TYN+ +D LCKN  + +A+ L
Sbjct: 369 PDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIAL 428

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +     + D+  Y  LIDGLCK GRL+ A  +F  L  +     V TY +MI G C+
Sbjct: 429 LTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCD 488

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           +   DKA  L   ME+N   PN   +  +I      ++     +LL +M
Sbjct: 489 NDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREM 537



 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 120/359 (33%), Positives = 202/359 (56%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V Y T+I+GLCK G    A  L  ++ G+ + P+VV YN++I  +C     NEA  L+
Sbjct: 160 NKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLY 219

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ +G+ P VVT++ ++   C  GK+++A  L + M+  ++ P+ +T+S L+DGFC  
Sbjct: 220 SEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKE 279

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G++  A+ +   M   G K D V+Y  L++GYC  K+V +A S++  M   G+   V +Y
Sbjct: 280 GRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSY 339

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N +  G  +I +V+ A+ LF+EM   ++  D  TYN+ IDGLCK+G I  A++L   +  
Sbjct: 340 NIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHD 399

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D   YN ++D LCK+ +++ A+ L   +    +  D+ TY I+I GLC  G++  
Sbjct: 400 RGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKD 459

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A ++F D+        V  +  +I GF   +   K + LL KM++   +P+A    +++
Sbjct: 460 AQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIII 518



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/331 (35%), Positives = 187/331 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +T  T+I GLC +G + +A     ++     + + V Y +LI+GLC     + A +
Sbjct: 123 EPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQ 182

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   +  + VQP+VV +N I+D +CK   ++EA  L   MV + + P+  TYS L+ GFC
Sbjct: 183 LLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFC 242

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + GK+N A  LF  M S     D  +++IL++G+CK   V+EA ++   M+ +GIKP VV
Sbjct: 243 ILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVV 302

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY +L  G   + QV  A  +F  M +  V A+  +YN  I+G CK   + EA+ LF+ +
Sbjct: 303 TYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEM 362

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D+  YN LIDGLCKSG++  AL+L   +  R +  D +TYN ++  LC + Q+
Sbjct: 363 HCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQV 422

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           DKA  L   M++  + P++  +  LI G  +
Sbjct: 423 DKAIALLTKMKDEGIQPDMYTYTILIDGLCK 453



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 189/363 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    +  I+  L K      A +L  +M+   I  D+VT+N LI+        + +  +
Sbjct: 54  PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  ++ +G +P+ +T   ++  LC  G++ +A    D +V      N   Y TL++G C 
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+ + A +L   ++    + + V YN +I+  CK K V EA  LY EMVSKGI P VVT
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  G   + ++  A+ LF +M  +++  D  T++  +DG CK G + EA  +   + 
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMM 293

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+  Y  L+DG C   ++  A  +F ++ +  + A+V +YNIMI+G C   ++D
Sbjct: 294 KQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVD 353

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A +LF +M    + P+V+ + +LI G  +  K S  ++L+ +M ++ V  D    + ++
Sbjct: 354 EAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSIL 413

Query: 374 DLL 376
           D L
Sbjct: 414 DAL 416



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 195/360 (54%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VT+N +I+   + G    + ++F  +  +   P+ +T  +LI GLC     ++A     +
Sbjct: 92  VTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDK 151

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           ++  G   + V +  +++ LCK G+   A +LL  +  + V+PN   Y+T++D  C    
Sbjct: 152 VVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKL 211

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +N A +L+  M S G   D V+Y+ LI+G+C   ++ +A+ L+ +M+S+ I P V T++ 
Sbjct: 212 VNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSI 271

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G  +  +V+ A  +   M +  +  D  TY + +DG C    + +A  +F T+    
Sbjct: 272 LVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGG 331

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              ++Q+YN +I+G CK  +++ A+ LF+ +  + ++ DVVTYN +I GLC  G++  A 
Sbjct: 332 VTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYAL 391

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            L  +M +  V  + I + +++    + ++  K I LL KMK++ + PD    ++++D L
Sbjct: 392 KLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGL 451



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 93/280 (33%), Positives = 155/280 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T++ ++DG CKEG V +AK +   M  + I PDVVTY SL+ G C     N+AK +
Sbjct: 264 PDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSI 323

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   GV  +V ++N++++  CK  K+DEA  L   M  +++ P+  TY++L+DG C 
Sbjct: 324 FNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCK 383

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +GKI+ A +L   M   G  HD ++YN +++  CKN +V++A++L  +M  +GI+P + T
Sbjct: 384 SGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYT 443

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +  +++ A  +FE++          TY   I G C N    +A+ L   + 
Sbjct: 444 YTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKME 503

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
              C  + + Y  +I  L +    ++A +L R +  R L+
Sbjct: 504 DNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 170/331 (51%)

Query: 46  NINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA 105
           N  P +  +  ++  L   N +  A  L  EM   G+   +VTFN++++   + G    +
Sbjct: 51  NPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFS 110

Query: 106 SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILING 165
             +   ++++   PNA T +TL+ G CL G+I++A      + ++G   + V Y  LING
Sbjct: 111 FSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLING 170

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
            CK  +   AL L R +  K ++P VV YNT+   + ++  V  A  L+ EM    ++ D
Sbjct: 171 LCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPD 230

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
             TY+  I G C  G + +A+ LF  +   +   D+  ++ L+DG CK GR++ A  +  
Sbjct: 231 VVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLA 290

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            + ++ +  DVVTY  ++ G C   Q++KA  +F  M +  V  NV  +  +I+GF +I 
Sbjct: 291 MMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIK 350

Query: 346 KPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           K  + + L  +M  K ++PD    + ++D L
Sbjct: 351 KVDEAMNLFKEMHCKNIIPDVVTYNSLIDGL 381



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/329 (23%), Positives = 155/329 (47%), Gaps = 2/329 (0%)

Query: 48  NPDVVTYNSLIHGLCHANDWNEAKRL--FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA 105
           NP  +   SL   L H +  +E   +  F  +++    P +  F  I+  L K      A
Sbjct: 16  NPKFIISTSLYSQLHHHHQDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTA 75

Query: 106 SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILING 165
             L   M    +  +  T++ L++ F   G  + +  +F ++   G + + ++   LI G
Sbjct: 76  ISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKG 135

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
            C   ++ +AL  + ++V+ G     V Y TL  GL ++ Q   AL+L   +    V  +
Sbjct: 136 LCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPN 195

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
              YNT ID +CK   + EA +L+  +       D+  Y+ LI G C  G+L  A+ LF 
Sbjct: 196 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFN 255

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            +    +  DV T++I++ G C +G++ +A ++   M +  + P+V+ + +L+ G+  + 
Sbjct: 256 KMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVK 315

Query: 346 KPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + +K   + + M +  V  +    +++++
Sbjct: 316 QVNKAKSIFNTMAQGGVTANVQSYNIMIN 344


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 134/330 (40%), Positives = 206/330 (62%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + +PN V Y+TIIDG+CK+  V+ A  L+ +M  + I+P+VVTY++LI G        
Sbjct: 190 GNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLK 249

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  LF +M+ + ++P V TFN+++D  CK+GKM E   +  +M+++ ++PN  TY +LM
Sbjct: 250 DAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLM 309

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+CL  ++N+A+ +  +M   G   D  SYNILI+G+CK K+V+EA++L++EM  K I 
Sbjct: 310 DGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHII 369

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTYN+L  GL ++ ++ +ALKL +EM    V  D  TY++ +D LCKN  + +A+ L
Sbjct: 370 PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL 429

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              L       ++  Y  LIDGLCK GRLE A  +F  L  +     V TY +MIHG CN
Sbjct: 430 LTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCN 489

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            G  D+A  L   M++N+  P+ + +  +I
Sbjct: 490 KGLFDEALALLSKMKDNSCIPDAVTYEIII 519



 Score =  231 bits (588), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 120/359 (33%), Positives = 204/359 (56%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + V Y T+I GLCK G    A  L  ++ G  + P+VV Y+++I G+C     N+A  L+
Sbjct: 161 DQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLY 220

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ +G+ P+VVT++ ++      G++ +A  L + M+  +++P+ +T++ L+DGFC  
Sbjct: 221 SEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKD 280

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK+   + +F  M   G K + V+Y  L++GYC  KEV +A S+   M  +G+ P + +Y
Sbjct: 281 GKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSY 340

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L  G  +I +V+ A+ LF+EM    +  D  TYN+ IDGLCK G I  A++L   +  
Sbjct: 341 NILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHD 400

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                DI  Y+ ++D LCK+ +++ A+ L   L  + +  ++ TY I+I GLC  G+++ 
Sbjct: 401 RGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLED 460

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           AH++F D+        V  +  +IHGF       + + LL KMK+   +PDA    +++
Sbjct: 461 AHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIII 519



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 206/415 (49%), Gaps = 51/415 (12%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE--- 69
           K N + Y++I         V  A +LF ++  +N  P  + +N ++  L  +  ++    
Sbjct: 38  KINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLS 97

Query: 70  -AKRLFFEMMDQ------------GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
            ++++ FE ++             G  P+ +TF  ++  LC  G++ +A    D +V   
Sbjct: 98  LSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMG 157

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
            + +   Y TL+ G C  G+   A +L   ++    + + V Y+ +I+G CK+K V +A 
Sbjct: 158 FQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAF 217

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            LY EMVSKGI P VVTY+ L  G F + Q++ A+ LF +M  +++  D  T+N  +DG 
Sbjct: 218 DLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGF 277

Query: 237 CKNGYIVEAVELFRTLG--------ILKCEL---------------------------DI 261
           CK+G + E   +F  +         +  C L                           DI
Sbjct: 278 CKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDI 337

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
           Q+YN LIDG CK  +++ A+ LF+ +  + ++ DVVTYN +I GLC  G++  A  L  +
Sbjct: 338 QSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDE 397

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           M +  V P++I + +++    + ++  K I LL K+K++ + P+    ++++D L
Sbjct: 398 MHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGL 452



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/280 (32%), Positives = 152/280 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  T+N ++DG CK+G + + K +F  M  + I P+VVTY SL+ G C   + N+AK 
Sbjct: 264 KPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKS 323

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           + + M  +GV P + ++N+++D  CK  K+DEA  L   M  + + P+  TY++L+DG C
Sbjct: 324 ILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLC 383

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GKI+ A +L   M   G   D ++Y+ +++  CKN +V++A++L  ++  +GI+P + 
Sbjct: 384 KLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMY 443

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L  GL +  ++E A  +FE++         +TY   I G C  G   EA+ L   +
Sbjct: 444 TYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKM 503

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
               C  D   Y  +I  L      + A +L   + R +L
Sbjct: 504 KDNSCIPDAVTYEIIIRSLFDKDENDKAEKLREMITRGLL 543


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 154/458 (33%), Positives = 240/458 (52%), Gaps = 82/458 (17%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M N   + G+ CKP  V+Y+ IIDGLCK+   D+A+ LF +MK + + PDV++Y SLIHG
Sbjct: 106 MLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHG 165

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
            C +  W +AK LF EM+D G++  V T ++++D LCK GK+ EA+ LL++M+QR    +
Sbjct: 166 FCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILD 225

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD------------------------ 156
             TYSTL+ G C+  +I+ A  LF SM+ +GC+ D                         
Sbjct: 226 IVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQ 285

Query: 157 -----------------VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
                            +SY+I+I+G CK++  +EA  L++EM ++GI P V++Y TL  
Sbjct: 286 EMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIH 345

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE--------------- 244
           G     + E A  LF EM    +  D +T +  ID LCK G ++E               
Sbjct: 346 GFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIP 405

Query: 245 --------------------AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
                               A +LF  +  L C  ++     L+ GLC+SG ++IALEL 
Sbjct: 406 DVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELH 465

Query: 285 RSL-----PRRV-LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           +++     P  +    + ++Y+I+I GLC  G+ D+A +LF +M+   V P+VI + +LI
Sbjct: 466 KNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLI 525

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           HGF R  K      L ++M +  V PD +  S+++D+L
Sbjct: 526 HGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDML 563



 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 115/287 (40%), Positives = 179/287 (62%), Gaps = 6/287 (2%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M +     G+ CKPN ++Y+ IIDGLCK G  D+A+ LF +MK   + PDV++Y SLIHG
Sbjct: 468 MLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHG 527

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
            C +  W +AK LF EM+D GVQP V TF+V++D LCK GK+ EA+ LL++M+QR   PN
Sbjct: 528 FCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPN 587

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY+TL+ G C+  +I+ A +LF  M+ +GC  D V+Y  L+ G C+   ++ AL L++
Sbjct: 588 TVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHK 647

Query: 181 EMVS------KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           +M+S         KP V++Y+ +  GL +  + + A +LF+EM+   V  +  +Y + I 
Sbjct: 648 KMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIH 707

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           G C++G + +A  LF  +     +L+   Y+ +I G CK G+++ AL
Sbjct: 708 GFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754



 Score =  228 bits (580), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 131/373 (35%), Positives = 209/373 (56%), Gaps = 12/373 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  T + +ID LCK+G V +A  L   +      PDVVT  +L+ GLC  +  ++A +
Sbjct: 369 QPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQ 428

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR------DVRPNAFTYST 126
           LF +M   G  P+VVT   +M  LC++G +  A  L   M+        + +PNA +YS 
Sbjct: 429 LFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSI 488

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++DG C  G+ + A ELF  M+++G   D +SY  LI+G+C++ + ++A  L+ EMV  G
Sbjct: 489 IIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIG 548

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           ++P V T++ L   L +  +V  A +L E M +     +T TY T + GLC N  I EA 
Sbjct: 549 VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEAT 608

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV------LVADVVTYN 300
           +LF  +  L C  D+  Y  L+ GLC++G ++ ALEL + +             DV++Y+
Sbjct: 609 QLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYS 668

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           I+I GLC  G+ D+A +LF +M+   V PNVI + +LIHGF R  K      L ++M ++
Sbjct: 669 IIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQ 728

Query: 361 KVMPDASIVSMVV 373
            V  +A   S+++
Sbjct: 729 GVQLNAVTYSVMI 741



 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/375 (33%), Positives = 206/375 (54%), Gaps = 14/375 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  + VTY+T+I GLC +  + +A  LF+ MK     PD + Y +L+ GLC     N A 
Sbjct: 41  CILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIAL 100

Query: 72  RLFFEMMDQGVQ------PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            L  EM++   Q      P++V++++I+D LCK+ + DEA  L   M  + + P+  +Y+
Sbjct: 101 HLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYT 160

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           +L+ GFC +GK  +A+ LF  M  +G + D  + ++LI+  CK  +V EA  L   M+ +
Sbjct: 161 SLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQR 220

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G    +VTY+TL  GL   H++  A +LF  MQ+     D   Y T + GLC+ G I  A
Sbjct: 221 GCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTA 280

Query: 246 VELFRTL-------GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           ++L + +       GI KC+  + +Y+ +IDGLCK  R + A ELF+ +  + ++ DV++
Sbjct: 281 LQLHQEMLNDTGRYGI-KCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVIS 339

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y  +IHG C  G+ +KA  LF +M +  + P+V     LI    +  K  +  +LL  + 
Sbjct: 340 YTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVI 399

Query: 359 EKKVMPDASIVSMVV 373
           ++  +PD    + +V
Sbjct: 400 QRGCIPDVVTCTTLV 414



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 123/359 (34%), Positives = 196/359 (54%), Gaps = 14/359 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT  T++ GLC +  + KA  LFL+M+     P+VVT  +L+ GLC + +   A 
Sbjct: 403 CIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIAL 462

Query: 72  RLFFEMMDQ------GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            L   M+          +P+ +++++I+D LCK G+ DEA  L   M    V P+  +Y+
Sbjct: 463 ELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYT 522

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           +L+ GFC +GK   A+ LF  M  +G + D  ++++LI+  CK  +V EA  L   M+ +
Sbjct: 523 SLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQR 582

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G  P  VTY TL  GL    ++  A +LF +MQ+     D  TY T + GLC+ G I  A
Sbjct: 583 GCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTA 642

Query: 246 VELFRTL----GILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           +EL + +    G        D+ +Y+ +IDGLCK GR + A ELF+ +    ++ +V++Y
Sbjct: 643 LELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISY 702

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
             +IHG C  G+++ A  LF +M +  V  N + +  +IHGF +  +  K   L  KM+
Sbjct: 703 TSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKME 759



 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/376 (33%), Positives = 200/376 (53%), Gaps = 12/376 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  T   +ID  CKEG V +A  L   M       D+VTY++LI GLC  +  +EA +
Sbjct: 7   QPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQ 66

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR------DVRPNAFTYST 126
           LF  M   G +P  + +  +M  LC+ GK++ A  L   M+          +P   +YS 
Sbjct: 67  LFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSI 126

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++DG C   + + A ELF  M++ G   D +SY  LI+G+C++ + E+A  L+ EM+  G
Sbjct: 127 IIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVG 186

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I+  V T + L   L +  +V  A +L E M +     D  TY+T I GLC    I EA 
Sbjct: 187 IRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEAT 246

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV------LVADVVTYN 300
            LF ++  L C  D  AY  L+ GLC++G +  AL+L + +              +++Y+
Sbjct: 247 RLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYS 306

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           I+I GLC D + D+A +LF +M+   + P+VI + TLIHGF    K  K   L ++M + 
Sbjct: 307 IIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV 366

Query: 361 KVMPDASIVSMVVDLL 376
            + PD +  S+++D+L
Sbjct: 367 GIQPDVTTSSVLIDML 382



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 123/326 (37%), Positives = 179/326 (54%), Gaps = 14/326 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM------KGENINPDVVTYNSLIHGLCHAN 65
           C PN VT  T++ GLC+ G +  A  L   M       G N  P+ ++Y+ +I GLC   
Sbjct: 438 CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCG 497

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             +EA+ LF EM   GV P V+++  ++   C++GK  +A  L + MV   V+P+  T+S
Sbjct: 498 REDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 557

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+D  C  GK+  A EL   M   GC  + V+Y  L+ G C N  + EA  L+ +M   
Sbjct: 558 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKL 617

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD------DVAADTSTYNTFIDGLCKN 239
           G  P VVTY TL  GL +   ++ AL+L ++M  D      +   D  +Y+  IDGLCK+
Sbjct: 618 GCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKH 677

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G   EA ELF+ +  L    ++ +Y  LI G C+SG+LE A  LF  +  + +  + VTY
Sbjct: 678 GREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTY 737

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEEN 325
           ++MIHG C +GQ+DKA  LF  ME N
Sbjct: 738 SVMIHGFCKEGQIDKA--LFQKMEAN 761


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 139/364 (38%), Positives = 217/364 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V Y+ +ID LCK+G +D A +LF +M+ + I  DVV Y+S+I GLC+   W++  +
Sbjct: 241 KASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAK 300

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM+ + + P+VVTF+ ++D   K GK+ EA  L + MV R + P+  TYS+L+DGFC
Sbjct: 301 MLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFC 360

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++  A ++   M S GC+ + V+Y+ILIN YCK K V+  + L+ E+ SKG+    V
Sbjct: 361 KENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTV 420

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  +  ++  A +LF+EM    V     TY   +DGLC NG + +A+E+F  +
Sbjct: 421 TYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKM 480

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +  L I  YN +I G+C + +++ A  LF SL  + +  DV+TYN+MI GLC  G +
Sbjct: 481 QKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSL 540

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  LF  M+E+  AP+   +  LI   +  +     +EL+ +MK +    DAS + MV
Sbjct: 541 SEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMV 600

Query: 373 VDLL 376
           V +L
Sbjct: 601 VVML 604



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 121/354 (34%), Positives = 201/354 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N +TY  +++ +CK G    A  LF +M+  +I   VV Y+ +I  LC   + ++A 
Sbjct: 205 CEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDAL 264

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM  +G++  VV ++ I+  LC +G+ D+ +++L  M+ R++ PN  T+S L+D F
Sbjct: 265 SLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVF 324

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GK+  A+EL+  M + G   D ++Y+ LI+G+CK   + EA  +   MVSKG +P +
Sbjct: 325 VKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNI 384

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+ L     +  +V++ ++LF E+    + ADT TYNT + G C++G +  A ELF+ 
Sbjct: 385 VTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQE 444

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +        +  Y  L+DGLC +G L+ ALE+F  + +  ++  +  YNI+IHG+CN  +
Sbjct: 445 MVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASK 504

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +D A  LF  +    V P+V+ +  +I G  +    S+   L  KMKE    P 
Sbjct: 505 VDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPS 558



 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 117/361 (32%), Positives = 201/361 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PNT+T++T+I+G C EG V +A AL  +M      P+VVT N+LI+GLC      EA  
Sbjct: 136 EPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALV 195

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+  G + + +T+  +++ +CK+G    A  L   M +R ++ +   YS ++D  C
Sbjct: 196 LIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLC 255

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A  LF  ME  G K D V+Y+ +I G C +   ++   + REM+ + I P VV
Sbjct: 256 KDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVV 315

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++ L     +  ++  A +L+ EM    +A DT TY++ IDG CK   + EA ++   +
Sbjct: 316 TFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLM 375

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               CE +I  Y+ LI+  CK+ R++  + LF  +  + LVAD VTYN ++ G C  G++
Sbjct: 376 VSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKL 435

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A +LF +M    V P+V+ +  L+ G     +  K +E+  KM++ +++    I +++
Sbjct: 436 NVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNII 495

Query: 373 V 373
           +
Sbjct: 496 I 496



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 178/343 (51%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           V++A  LF  M      P ++ ++ L   +    +++       EM   G++ ++ T N+
Sbjct: 50  VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNI 109

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C+  K+  A  ++   ++    PN  T+STL++GFCL G+++ A  L   M  M 
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK 169

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + + V+ N LING C    V EAL L   MV  G +   +TY  +   + +      AL
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            LF +M+   + A    Y+  ID LCK+G + +A+ LF  + +   + D+ AY+ +I GL
Sbjct: 230 DLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGL 289

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C  GR +   ++ R +  R ++ +VVT++ +I     +G++ +A +L+ +M    +AP+ 
Sbjct: 290 CNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDT 349

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           I + +LI GF + N+  +  ++L  M  K   P+    S++++
Sbjct: 350 ITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILIN 392



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 122/217 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN VTY+ +I+  CK   VD    LF ++  + +  D VTYN+L+ G C +   N AK
Sbjct: 380 CEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAK 439

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+ +GV PSVVT+ +++D LC NG++ +A  + + M +  +      Y+ ++ G 
Sbjct: 440 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGM 499

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++ A  LF S+   G K D ++YN++I G CK   + EA  L+R+M   G  P+ 
Sbjct: 500 CNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSD 559

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
            TYN L         V  +++L EEM+    AAD ST
Sbjct: 560 CTYNILIRAHLGGSGVISSVELIEEMKMRGFAADAST 596



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 159/314 (50%), Gaps = 11/314 (3%)

Query: 74  FFEMMDQG-VQPSVVTFNVIMD------ELCKNG----KMDEASRLLDLMVQRDVRPNAF 122
           F +++D+G ++ S++ ++ I +      E  +NG    K++EA  L + M+Q    P+  
Sbjct: 11  FTQIIDKGTLRISLLHYSCISEAKVSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLI 70

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
            +S L        + +        M+  G +H+  + NI+IN +C+ +++  A S+    
Sbjct: 71  DFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRA 130

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
           +  G +P  +T++TL  G     +V  A+ L + M       +  T NT I+GLC  G +
Sbjct: 131 LKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRV 190

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            EA+ L   +    CE +   Y  +++ +CKSG   +AL+LFR +  R + A VV Y+I+
Sbjct: 191 TEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIV 250

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I  LC DG +D A  LF +ME   +  +V+ + ++I G     +     ++L +M  + +
Sbjct: 251 IDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNI 310

Query: 363 MPDASIVSMVVDLL 376
           +P+    S ++D+ 
Sbjct: 311 IPNVVTFSALIDVF 324


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 134/363 (36%), Positives = 214/363 (58%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  +I  LCK G V+ A   F QM  E ++P  + YNSLIHGLC  N W  A+ L
Sbjct: 404 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 463

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+D+G+  + + FN I+D  CK G++ E+ +L +LMV+  V+PN  TY+TL++G+CL
Sbjct: 464 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCL 523

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A +L   M S+G K + V+Y+ LINGYCK   +E+AL L++EM S G+ P ++T
Sbjct: 524 AGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIIT 583

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GLF+  +   A +L+  +       + STYN  + GLCKN    +A+++F+ L 
Sbjct: 584 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLC 643

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           ++  +L+ + +N +ID L K GR + A +LF +     LV +  TY +M   +   G ++
Sbjct: 644 LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +   LFL ME+N    +  +   ++   ++  + ++    L  + EK    +AS  S+ +
Sbjct: 704 ELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI 763

Query: 374 DLL 376
           DLL
Sbjct: 764 DLL 766



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 205/395 (51%), Gaps = 35/395 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYN+II  LCK   +DKA  +   M    + PD +TYNS++HG C +    EA   
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   GV+P VVT++++MD LCKNG+  EA ++ D M +R ++P   TY TL+ G+  
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT 348

Query: 134 -----------------------------------TGKINRAEELFGSMESMGCKHDDVS 158
                                               GK+++A  +F  M   G   + V+
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVT 408

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y  +I   CK+  VE+A+  + +M+ +G+ P  + YN+L  GL   ++ E A +L  EM 
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  +T  +N+ ID  CK G ++E+ +LF  +  +  + ++  YN LI+G C +G+++
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A++L   +    L  + VTY+ +I+G C   +M+ A  LF +ME + V+P++I +  ++
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            G  +  + +   EL  ++ E     + S  ++++
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 623



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 199/360 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   ++ +I     +G VD+A  +F +M+ + +NP+ VTY ++I  LC +    +A   
Sbjct: 369 PDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 428

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+D+G+ P  + +N ++  LC   K + A  L+  M+ R +  N   +++++D  C 
Sbjct: 429 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 488

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  +E+LF  M  +G K + ++YN LINGYC   +++EA+ L   MVS G+KP  VT
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+TL  G  +I ++E AL LF+EM+   V+ D  TYN  + GL +      A EL+  + 
Sbjct: 549 YSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 608

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               ++++  YN ++ GLCK+   + AL++F++L    L  +  T+NIMI  L   G+ D
Sbjct: 609 ESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRND 668

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A DLF+    N + PN   +  +    +      ++ +L   M++     D+ +++ +V
Sbjct: 669 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 728



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 205/427 (48%), Gaps = 73/427 (17%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM---KGENINPDVVTYNSLIHGLCHANDWN 68
           C PN  +YN ++ GLC E    +A  L   M   +G    PDVV+Y ++I+G     D +
Sbjct: 154 CIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSD 213

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A   + EM+D+G+ P VVT+N I+  LCK   MD+A  +L+ MV+  V P+  TY++++
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 273

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G+C +G+   A      M S G + D V+Y++L++  CKN    EA  ++  M  +G+K
Sbjct: 274 HGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333

Query: 189 PTVVTYNTLFLG------LFEIH-----------------------------QVEHALKL 213
           P + TY TL  G      L E+H                             +V+ A+ +
Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLV 393

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL-----------------GILK 256
           F +M++  +  +  TY   I  LCK+G + +A+  F  +                 G+  
Sbjct: 394 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 453

Query: 257 CE------------------LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           C                   L+   +N +ID  CK GR+  + +LF  + R  +  +V+T
Sbjct: 454 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVIT 513

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           YN +I+G C  G+MD+A  L   M    + PN + + TLI+G+ +I++    + L  +M+
Sbjct: 514 YNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEME 573

Query: 359 EKKVMPD 365
              V PD
Sbjct: 574 SSGVSPD 580



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 189/388 (48%), Gaps = 35/388 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLI------------HG 60
           +P+ VTY+ ++D LCK G   +A+ +F  M    + P++ TY +L+            HG
Sbjct: 298 EPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 357

Query: 61  L---------------------CHANDW--NEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           L                      +AN    ++A  +F +M  QG+ P+ VT+  ++  LC
Sbjct: 358 LLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILC 417

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K+G++++A    + M+   + P    Y++L+ G C   K  RAEEL   M   G   + +
Sbjct: 418 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 477

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            +N +I+ +CK   V E+  L+  MV  G+KP V+TYNTL  G     +++ A+KL   M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
               +  +T TY+T I+G CK   + +A+ LF+ +       DI  YN ++ GL ++ R 
Sbjct: 538 VSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRT 597

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A EL+  +       ++ TYNI++HGLC +   D A  +F ++    +      F  +
Sbjct: 598 AAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIM 657

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPD 365
           I   +++ +  +  +L        ++P+
Sbjct: 658 IDALLKVGRNDEAKDLFVAFSSNGLVPN 685



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 166/337 (49%), Gaps = 4/337 (1%)

Query: 44  GENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMD 103
            + + PD+ TY  LI   C A   +        ++ +G +   + F  ++  LC + +  
Sbjct: 80  ADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS 139

Query: 104 EASRL-LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM---ESMGCKHDDVSY 159
           +A  + L  M +    PN F+Y+ L+ G C   +   A EL   M      G   D VSY
Sbjct: 140 DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
             +ING+ K  + ++A S Y EM+ +GI P VVTYN++   L +   ++ A+++   M +
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK 259

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
           + V  D  TYN+ + G C +G   EA+   + +     E D+  Y+ L+D LCK+GR   
Sbjct: 260 NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME 319

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A ++F S+ +R L  ++ TY  ++ G    G + + H L   M  N + P+  +F  LI 
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +    K  + + +  KM+++ + P+A     V+ +L
Sbjct: 380 AYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 133/284 (46%), Gaps = 6/284 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            IGV  KPN +TYNT+I+G C  G +D+A  L   M    + P+ VTY++LI+G C  + 
Sbjct: 504 RIGV--KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 561

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A  LF EM   GV P ++T+N+I+  L +  +   A  L   + +   +    TY+ 
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ G C     + A ++F ++  M  K +  ++NI+I+   K    +EA  L+    S G
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P   TY  +   +     +E   +LF  M+ +    D+   N  +  L + G I  A 
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAG 741

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
                +      L+    +  ID L   G+ +   E +R LP +
Sbjct: 742 TYLSMIDEKHFSLEASTASLFID-LLSGGKYQ---EYYRFLPEK 781



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 116/237 (48%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           +G + V  KPNTVTY+T+I+G CK   ++ A  LF +M+   ++PD++TYN ++ GL   
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
                AK L+  + + G Q  + T+N+I+  LCKN   D+A ++   +   D++  A T+
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + ++D     G+ + A++LF +  S G   +  +Y ++         +EE   L+  M  
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 714

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
            G        N +   L +  ++  A      +     + + ST + FID L    Y
Sbjct: 715 NGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 771


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 134/363 (36%), Positives = 214/363 (58%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  +I  LCK G V+ A   F QM  E ++P  + YNSLIHGLC  N W  A+ L
Sbjct: 404 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 463

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+D+G+  + + FN I+D  CK G++ E+ +L +LMV+  V+PN  TY+TL++G+CL
Sbjct: 464 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCL 523

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A +L   M S+G K + V+Y+ LINGYCK   +E+AL L++EM S G+ P ++T
Sbjct: 524 AGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIIT 583

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GLF+  +   A +L+  +       + STYN  + GLCKN    +A+++F+ L 
Sbjct: 584 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLC 643

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           ++  +L+ + +N +ID L K GR + A +LF +     LV +  TY +M   +   G ++
Sbjct: 644 LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +   LFL ME+N    +  +   ++   ++  + ++    L  + EK    +AS  S+ +
Sbjct: 704 ELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI 763

Query: 374 DLL 376
           DLL
Sbjct: 764 DLL 766



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 120/352 (34%), Positives = 190/352 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYN+II  LCK   +DKA  +   M    + PD +TYNS++HG C +    EA   
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   GV+P VVT++++MD LCKNG+  EA ++ D M +R ++P   TY TL+ G+  
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT 348

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +     L   M   G   D   ++ILI  Y K  +V++A+ ++ +M  +G+ P  VT
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVT 408

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  +   L +  +VE A+  FE+M  + ++     YN+ I GLC       A EL   + 
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                L+   +N +ID  CK GR+  + +LF  + R  +  +V+TYN +I+G C  G+MD
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A  L   M    + PN + + TLI+G+ +I++    + L  +M+   V PD
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPD 580



 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 198/360 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TYN+I+ G C  G   +A     +M+ + + PDVVTY+ L+  LC      EA+++
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKI 323

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M  +G++P + T+  ++      G + E   LLDLMV+  + P+ + +S L+  +  
Sbjct: 324 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAK 383

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+++A  +F  M   G   + V+Y  +I   CK+  VE+A+  + +M+ +G+ P  + 
Sbjct: 384 QGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIV 443

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L  GL   ++ E A +L  EM    +  +T  +N+ ID  CK G ++E+ +LF  + 
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMV 503

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  + ++  YN LI+G C +G+++ A++L   +    L  + VTY+ +I+G C   +M+
Sbjct: 504 RIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRME 563

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  LF +ME + V+P++I +  ++ G  +  + +   EL  ++ E     + S  ++++
Sbjct: 564 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 623



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 200/360 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   ++ +I    K+G VD+A  +F +M+ + +NP+ VTY ++I  LC +    +A   
Sbjct: 369 PDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 428

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+D+G+ P  + +N ++  LC   K + A  L+  M+ R +  N   +++++D  C 
Sbjct: 429 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 488

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  +E+LF  M  +G K + ++YN LINGYC   +++EA+ L   MVS G+KP  VT
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+TL  G  +I ++E AL LF+EM+   V+ D  TYN  + GL +      A EL+  + 
Sbjct: 549 YSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 608

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               ++++  YN ++ GLCK+   + AL++F++L    L  +  T+NIMI  L   G+ D
Sbjct: 609 ESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRND 668

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A DLF+    N + PN   +  +    +      ++ +L   M++     D+ +++ +V
Sbjct: 669 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 728



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 167/337 (49%), Gaps = 4/337 (1%)

Query: 44  GENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMD 103
            + + PD+ TY  LI   C A   +        ++ +G +   + F  ++  LC + +  
Sbjct: 80  ADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS 139

Query: 104 EASRL-LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM---ESMGCKHDDVSY 159
           +A  + L  M +    PN F+Y+ L+ G C   +   A EL   M      G   D VSY
Sbjct: 140 DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
             +ING+ K  + ++A S Y EM+ +GI P VVTYN++   L +   ++ A+++   M +
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK 259

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
           + V  D  TYN+ + G C +G   EA+   + +     E D+  Y+ L+D LCK+GR   
Sbjct: 260 NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME 319

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A ++F S+ +R L  ++ TY  ++ G    G + + H L   M  N + P+  +F  LI 
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            + +  K  + + +  KM+++ + P+A     V+ +L
Sbjct: 380 AYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 133/284 (46%), Gaps = 6/284 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            IGV  KPN +TYNT+I+G C  G +D+A  L   M    + P+ VTY++LI+G C  + 
Sbjct: 504 RIGV--KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 561

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A  LF EM   GV P ++T+N+I+  L +  +   A  L   + +   +    TY+ 
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ G C     + A ++F ++  M  K +  ++NI+I+   K    +EA  L+    S G
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P   TY  +   +     +E   +LF  M+ +    D+   N  +  L + G I  A 
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAG 741

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
                +      L+    +  ID L   G+ +   E +R LP +
Sbjct: 742 TYLSMIDEKHFSLEASTASLFID-LLSGGKYQ---EYYRFLPEK 781



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 116/237 (48%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           +G + V  KPNTVTY+T+I+G CK   ++ A  LF +M+   ++PD++TYN ++ GL   
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
                AK L+  + + G Q  + T+N+I+  LCKN   D+A ++   +   D++  A T+
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + ++D     G+ + A++LF +  S G   +  +Y ++         +EE   L+  M  
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 714

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
            G        N +   L +  ++  A      +     + + ST + FID L    Y
Sbjct: 715 NGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 771


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  265 bits (677), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 132/365 (36%), Positives = 210/365 (57%), Gaps = 11/365 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V Y+ IIDGL K+G    A  L+ +M+ + I PD+ TYN +I G C +  W+EA+R
Sbjct: 246 KPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQR 305

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+++ + P+VVT++ +++   K  K  EA  L D M+ R + PN  TY++++DGFC
Sbjct: 306 LLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFC 365

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +++ AE +F  M + GC  D  ++N LI+GYC  K +++   L  EM   G+     
Sbjct: 366 KQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTT 425

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G   +  +  AL L ++M    V  D  T NT +DGLC NG + +A+E+F+ +
Sbjct: 426 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 485

Query: 253 GILKCEL-----------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
              K +L           D+Q YN LI GL   G+   A EL++ +P R +V + +TY+ 
Sbjct: 486 QKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSS 545

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           MI+GLC   ++D+A  +F  M   + +P+V+ F TL+ G+ +  +    +EL  +M  + 
Sbjct: 546 MINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRG 605

Query: 362 VMPDA 366
           ++ DA
Sbjct: 606 IVADA 610



 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/356 (34%), Positives = 190/356 (53%), Gaps = 5/356 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT++T++ GLC E  V +A  LF QM      P+VVT+ +L++GLC      EA  
Sbjct: 144 QPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVA 199

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ-RDVRPNAFTYSTLMDGF 131
           L   M++ G+QP+ +T+  I+D +CK G    A  LL  M +   ++PN   YS ++DG 
Sbjct: 200 LLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGL 259

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+ + A  L+  M+  G   D  +YN +I+G+C +    EA  L +EM+ + I P V
Sbjct: 260 WKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNV 319

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+ L     +  +   A +L++EM    +  +T TYN+ IDG CK   +  A  +F  
Sbjct: 320 VTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYV 379

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  D+  +N LIDG C + R++   EL   +    LVAD  TYN +IHG C  G 
Sbjct: 380 MATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGD 439

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           ++ A DL   M  + V P+++   TL+ G     K    +E+   M++ K+  DAS
Sbjct: 440 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 495



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 169/321 (52%), Gaps = 11/321 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNT+TYN++IDG CK+  +D A+ +F  M  +  +PDV T+N+LI G C A   ++   L
Sbjct: 352 PNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTEL 411

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM + G+     T+N ++   C  G ++ A  L   M+   V P+  T +TL+DG C 
Sbjct: 412 LHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCD 471

Query: 134 TGKINRAEELFGSMESM-----------GCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
            GK+  A E+F +M+             G + D  +YNILI+G     +  EA  LY+EM
Sbjct: 472 NGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEM 531

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
             +GI P  +TY+++  GL +  +++ A ++F+ M     + D  T+NT + G CK G +
Sbjct: 532 PHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRV 591

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            + +ELF  +G      D   Y  LI G  K G +  AL++F+ +    +  D +T   M
Sbjct: 592 DDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSM 651

Query: 303 IHGLCNDGQMDKAHDLFLDME 323
           +  L +  ++ +A  +  D++
Sbjct: 652 LTVLWSKEELKRAVAMLEDLQ 672



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 183/361 (50%), Gaps = 5/361 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + +N ++  + +    D   +L+ +M+ + I  DV ++N LI   C  +    A   
Sbjct: 75  PSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALST 134

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F ++   G QP VVTF+ ++  LC   ++ EA   LDL  Q   RPN  T++TLM+G C 
Sbjct: 135 FGKITKLGFQPDVVTFSTLLHGLCVEDRVSEA---LDLFHQM-CRPNVVTFTTLMNGLCR 190

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-IKPTVV 192
            G++  A  L   M   G + + ++Y  +++G CK  +   AL+L R+M     IKP VV
Sbjct: 191 EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVV 250

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ +  GL++  +   A  L+ EMQ   +  D  TYN  IDG C +G   EA  L + +
Sbjct: 251 IYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEM 310

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K   ++  Y+ LI+   K  +   A EL+  +  R ++ + +TYN MI G C   ++
Sbjct: 311 LERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRL 370

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  +F  M     +P+V  F TLI G+    +     ELLH+M E  ++ D +  + +
Sbjct: 371 DAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTL 430

Query: 373 V 373
           +
Sbjct: 431 I 431



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/252 (37%), Positives = 134/252 (53%), Gaps = 11/252 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  T+NT+IDG C    +D    L  +M    +  D  TYN+LIHG C   D N A 
Sbjct: 385 CSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAAL 444

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL--------LDLMVQRD---VRPN 120
            L  +M+  GV P +VT N ++D LC NGK+ +A  +        +DL   R    V P+
Sbjct: 445 DLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPD 504

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY+ L+ G    GK   AEEL+  M   G   + ++Y+ +ING CK   ++EA  ++ 
Sbjct: 505 VQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFD 564

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            M SK   P VVT+NTL  G  +  +V+  L+LF EM R  + AD  TY T I G  K G
Sbjct: 565 SMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVG 624

Query: 241 YIVEAVELFRTL 252
            I  A+++F+ +
Sbjct: 625 NINGALDIFQEM 636



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 161/307 (52%), Gaps = 5/307 (1%)

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  LF +M+     PSV+ FN +M  + +  + D    L   M ++ +  + ++++ L+
Sbjct: 60  DAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILI 119

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
             FC   K+  A   FG +  +G + D V+++ L++G C    V EAL L+ +M     +
Sbjct: 120 KCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMC----R 175

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVT+ TL  GL    +V  A+ L + M  D +  +  TY T +DG+CK G  V A+ L
Sbjct: 176 PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNL 235

Query: 249 FRTLGILK-CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            R +  +   + ++  Y+ +IDGL K GR   A  L+  +  + +  D+ TYN MI G C
Sbjct: 236 LRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFC 295

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           + G+  +A  L  +M E  + PNV+ +  LI+ +V+  K  +  EL  +M  + ++P+  
Sbjct: 296 SSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTI 355

Query: 368 IVSMVVD 374
             + ++D
Sbjct: 356 TYNSMID 362



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 126/219 (57%), Gaps = 12/219 (5%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-----------NINPDVVTYNSLIH 59
           VC P+ VT NT++DGLC  G +  A  +F  M+              + PDV TYN LI 
Sbjct: 455 VC-PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILIS 513

Query: 60  GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
           GL +   + EA+ L+ EM  +G+ P+ +T++ +++ LCK  ++DEA+++ D M  +   P
Sbjct: 514 GLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSP 573

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           +  T++TL+ G+C  G+++   ELF  M   G   D ++Y  LI+G+ K   +  AL ++
Sbjct: 574 DVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIF 633

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +EM+S G+ P  +T  ++   L+   +++ A+ + E++Q
Sbjct: 634 QEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 115/216 (53%), Gaps = 5/216 (2%)

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L +G+ + K +E+A+ L+ +MV     P+V+ +N L   +  + + +  + L+++M+R  
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           +  D  ++N  I   C    +  A+  F  +  L  + D+  ++ L+ GLC   R+  AL
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           +LF  + R     +VVT+  +++GLC +G++ +A  L   M E+ + PN I + T++ G 
Sbjct: 168 DLFHQMCR----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223

Query: 342 VRINKPSKVIELLHKMKE-KKVMPDASIVSMVVDLL 376
            +I      + LL KM+E   + P+  I S ++D L
Sbjct: 224 CKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGL 259


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  265 bits (676), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 130/324 (40%), Positives = 201/324 (62%), Gaps = 2/324 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           EIG   KP+ V YN IID LCK   V+ A   F +++ + I P+VVTY +L++GLC+++ 
Sbjct: 183 EIGY--KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           W++A RL  +M+ + + P+V+T++ ++D   KNGK+ EA  L + MV+  + P+  TYS+
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L++G CL  +I+ A ++F  M S GC  D VSYN LING+CK K VE+ + L+REM  +G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +    VTYNTL  G F+   V+ A + F +M    ++ D  TYN  + GLC NG + +A+
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            +F  +   + +LDI  Y  +I G+CK+G++E A  LF SL  + L  D+VTY  M+ GL
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480

Query: 307 CNDGQMDKAHDLFLDMEENAVAPN 330
           C  G + +   L+  M++  +  N
Sbjct: 481 CTKGLLHEVEALYTKMKQEGLMKN 504



 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 125/358 (34%), Positives = 204/358 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT  ++++G C+   V  A +L  +M      PD+V YN++I  LC     N+A  
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD 211

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F E+  +G++P+VVT+  +++ LC + +  +A+RLL  M+++ + PN  TYS L+D F 
Sbjct: 212 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 271

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A+ELF  M  M    D V+Y+ LING C +  ++EA  ++  MVSKG    VV
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV 331

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNTL  G  +  +VE  +KLF EM +  + ++T TYNT I G  + G + +A E F  +
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  DI  YN L+ GLC +G LE AL +F  + +R +  D+VTY  +I G+C  G++
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++A  LF  +    + P+++ + T++ G        +V  L  KMK++ +M +   +S
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509



 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 193/360 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +N ++  + K    D   +L  +M+   I  D+ T+N +I+  C     + A  +
Sbjct: 83  PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+  G +P  VT   +++  C+  ++ +A  L+D MV+   +P+   Y+ ++D  C 
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           T ++N A + F  +E  G + + V+Y  L+NG C +    +A  L  +M+ K I P V+T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L     +  +V  A +LFEEM R  +  D  TY++ I+GLC +  I EA ++F  + 
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D+ +YN LI+G CK+ R+E  ++LFR + +R LV++ VTYN +I G    G +D
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA + F  M+   ++P++  +  L+ G     +  K + +   M+++++  D    + V+
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 189/348 (54%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T+N +I+  C    V  A ++  +M      PD VT  SL++G C  N  ++A  L  +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           ++ G +P +V +N I+D LCK  ++++A      + ++ +RPN  TY+ L++G C + + 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  L   M       + ++Y+ L++ + KN +V EA  L+ EMV   I P +VTY++L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL    +++ A ++F+ M      AD  +YNT I+G CK   + + ++LFR +     
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             +   YN LI G  ++G ++ A E F  +    +  D+ TYNI++ GLC++G+++KA  
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +F DM++  +  +++ + T+I G  +  K  +   L   +  K + PD
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 169/328 (51%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           LF  M      P +V +N L+  +     ++    L  +M   G++  + TFN++++  C
Sbjct: 72  LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
              ++  A  +L  M++    P+  T  +L++GFC   +++ A  L   M  +G K D V
Sbjct: 132 CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIV 191

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +YN +I+  CK K V +A   ++E+  KGI+P VVTY  L  GL    +   A +L  +M
Sbjct: 192 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 251

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
            +  +  +  TY+  +D   KNG ++EA ELF  +  +  + DI  Y+ LI+GLC   R+
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A ++F  +  +  +ADVV+YN +I+G C   +++    LF +M +  +  N + + TL
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPD 365
           I GF +     K  E   +M    + PD
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPD 399



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 159/299 (53%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           N+A  LF +M+     PS+V FN ++  + K  K D    L   M    +R + +T++ +
Sbjct: 67  NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++ FC   +++ A  + G M  +G + D V+   L+NG+C+   V +A+SL  +MV  G 
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP +V YN +   L +  +V  A   F+E++R  +  +  TY   ++GLC +    +A  
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +   K   ++  Y+ L+D   K+G++  A ELF  + R  +  D+VTY+ +I+GLC
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              ++D+A+ +F  M       +V+ + TLI+GF +  +    ++L  +M ++ ++ + 
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 120/239 (50%)

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           K+N A +LF  M         V +N L++   K K+ +  +SL ++M   GI+  + T+N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
            +        QV  AL +  +M +     D  T  + ++G C+   + +AV L   +  +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
             + DI AYN +ID LCK+ R+  A + F+ + R+ +  +VVTY  +++GLCN  +   A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             L  DM +  + PNVI +  L+  FV+  K  +  EL  +M    + PD    S +++
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 133/257 (51%), Gaps = 3/257 (1%)

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K+++A  L   MV+    P+   ++ L+       K +    L   ME +G ++D  ++N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           I+IN +C   +V  ALS+  +M+  G +P  VT  +L  G    ++V  A+ L ++M   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
               D   YN  ID LCK   + +A + F+ +       ++  Y  L++GLC S R   A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
             L   + ++ +  +V+TY+ ++     +G++ +A +LF +M   ++ P+++ + +LI+G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304

Query: 341 FV---RINKPSKVIELL 354
                RI++ +++ +L+
Sbjct: 305 LCLHDRIDEANQMFDLM 321



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 65/133 (48%)

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           +A++LF  +   +    I  +N L+  + K  + ++ + L + +    +  D+ T+NI+I
Sbjct: 68  DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           +  C   Q+  A  +   M +    P+ +   +L++GF R N+ S  + L+ KM E    
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187

Query: 364 PDASIVSMVVDLL 376
           PD    + ++D L
Sbjct: 188 PDIVAYNAIIDSL 200


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  264 bits (675), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 130/324 (40%), Positives = 201/324 (62%), Gaps = 2/324 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           EIG   KP+ V YN IID LCK   V+ A   F +++ + I P+VVTY +L++GLC+++ 
Sbjct: 183 EIGY--KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           W++A RL  +M+ + + P+V+T++ ++D   KNGK+ EA  L + MV+  + P+  TYS+
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L++G CL  +I+ A ++F  M S GC  D VSYN LING+CK K VE+ + L+REM  +G
Sbjct: 301 LVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +    VTYNTL  G F+   V+ A + F +M    ++ D  TYN  + GLC NG + +A+
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            +F  +   + +LDI  Y  +I G+CK+G++E A  LF SL  + L  D+VTY  M+ GL
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480

Query: 307 CNDGQMDKAHDLFLDMEENAVAPN 330
           C  G + +   L+  M++  +  N
Sbjct: 481 CTKGLLHEVEALYTKMKQEGLMKN 504



 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 124/358 (34%), Positives = 204/358 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT  ++++G C+   V  A +L  +M      PD+V YN++I  LC     N+A  
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD 211

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F E+  +G++P+VVT+  +++ LC + +  +A+RLL  M+++ + PN  TYS L+D F 
Sbjct: 212 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 271

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A+ELF  M  M    D V+Y+ L+NG C +  ++EA  ++  MVSKG    VV
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVV 331

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNTL  G  +  +VE  +KLF EM +  + ++T TYNT I G  + G + +A E F  +
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  DI  YN L+ GLC +G LE AL +F  + +R +  D+VTY  +I G+C  G++
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++A  LF  +    + P+++ + T++ G        +V  L  KMK++ +M +   +S
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509



 Score =  193 bits (491), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 193/360 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +N ++  + K    D   +L  +M+   I  D+ T+N +I+  C     + A  +
Sbjct: 83  PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+  G +P  VT   +++  C+  ++ +A  L+D MV+   +P+   Y+ ++D  C 
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           T ++N A + F  +E  G + + V+Y  L+NG C +    +A  L  +M+ K I P V+T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L     +  +V  A +LFEEM R  +  D  TY++ ++GLC +  I EA ++F  + 
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMV 322

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D+ +YN LI+G CK+ R+E  ++LFR + +R LV++ VTYN +I G    G +D
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA + F  M+   ++P++  +  L+ G     +  K + +   M+++++  D    + V+
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 189/348 (54%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T+N +I+  C    V  A ++  +M      PD VT  SL++G C  N  ++A  L  +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           ++ G +P +V +N I+D LCK  ++++A      + ++ +RPN  TY+ L++G C + + 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  L   M       + ++Y+ L++ + KN +V EA  L+ EMV   I P +VTY++L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL    +++ A ++F+ M      AD  +YNT I+G CK   + + ++LFR +     
Sbjct: 302 VNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             +   YN LI G  ++G ++ A E F  +    +  D+ TYNI++ GLC++G+++KA  
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +F DM++  +  +++ + T+I G  +  K  +   L   +  K + PD
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469



 Score =  176 bits (446), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 169/328 (51%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           LF  M      P +V +N L+  +     ++    L  +M   G++  + TFN++++  C
Sbjct: 72  LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
              ++  A  +L  M++    P+  T  +L++GFC   +++ A  L   M  +G K D V
Sbjct: 132 CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIV 191

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +YN +I+  CK K V +A   ++E+  KGI+P VVTY  L  GL    +   A +L  +M
Sbjct: 192 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 251

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
            +  +  +  TY+  +D   KNG ++EA ELF  +  +  + DI  Y+ L++GLC   R+
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRI 311

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A ++F  +  +  +ADVV+YN +I+G C   +++    LF +M +  +  N + + TL
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPD 365
           I GF +     K  E   +M    + PD
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPD 399



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 159/299 (53%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           N+A  LF +M+     PS+V FN ++  + K  K D    L   M    +R + +T++ +
Sbjct: 67  NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++ FC   +++ A  + G M  +G + D V+   L+NG+C+   V +A+SL  +MV  G 
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP +V YN +   L +  +V  A   F+E++R  +  +  TY   ++GLC +    +A  
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +   K   ++  Y+ L+D   K+G++  A ELF  + R  +  D+VTY+ +++GLC
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLC 306

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              ++D+A+ +F  M       +V+ + TLI+GF +  +    ++L  +M ++ ++ + 
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 120/239 (50%)

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           K+N A +LF  M         V +N L++   K K+ +  +SL ++M   GI+  + T+N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
            +        QV  AL +  +M +     D  T  + ++G C+   + +AV L   +  +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
             + DI AYN +ID LCK+ R+  A + F+ + R+ +  +VVTY  +++GLCN  +   A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             L  DM +  + PNVI +  L+  FV+  K  +  EL  +M    + PD    S +V+
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVN 303



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 133/257 (51%), Gaps = 3/257 (1%)

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K+++A  L   MV+    P+   ++ L+       K +    L   ME +G ++D  ++N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           I+IN +C   +V  ALS+  +M+  G +P  VT  +L  G    ++V  A+ L ++M   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
               D   YN  ID LCK   + +A + F+ +       ++  Y  L++GLC S R   A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
             L   + ++ +  +V+TY+ ++     +G++ +A +LF +M   ++ P+++ + +L++G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304

Query: 341 FV---RINKPSKVIELL 354
                RI++ +++ +L+
Sbjct: 305 LCLHDRIDEANQMFDLM 321



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 65/133 (48%)

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           +A++LF  +   +    I  +N L+  + K  + ++ + L + +    +  D+ T+NI+I
Sbjct: 68  DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           +  C   Q+  A  +   M +    P+ +   +L++GF R N+ S  + L+ KM E    
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187

Query: 364 PDASIVSMVVDLL 376
           PD    + ++D L
Sbjct: 188 PDIVAYNAIIDSL 200


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  264 bits (675), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 138/349 (39%), Positives = 213/349 (61%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + KPN   Y+TIID LCK   V +A  LF +M  + I+ DVVTY++LI+G C      
Sbjct: 440 GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLK 499

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  L  EM+ + + P V T+ +++D L K GK+ EA  +L +M++  V+P+ FTY+TLM
Sbjct: 500 EAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLM 559

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +G+ L  ++ +A+ +F +M  MG   D  +Y ILING+CK+K V+EAL+L++EM  K + 
Sbjct: 560 NGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMV 619

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  VTY++L  GL +  ++ +   L +EM+     AD  TYN+ IDGLCKNG++ +A+ L
Sbjct: 620 PDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIAL 679

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +       +   +  L+DGLCK GRL+ A E+F+ L  +    DV  YN+MI+G C 
Sbjct: 680 FNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCK 739

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            G +++A  +   MEEN   PN + F  +I+   + ++  K  +LL +M
Sbjct: 740 QGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQM 788



 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/402 (33%), Positives = 214/402 (53%), Gaps = 34/402 (8%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + KPN   YNTIID LCK   V +A  LF +M  + I+ +VVTY++LI+G C      
Sbjct: 126 GRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLK 185

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  L   M+ + + P+V T+N+++D LCK GK+ EA  +L +M++  V+ N  TYSTLM
Sbjct: 186 EALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLM 245

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV----- 183
           DG+ L  ++ +A+ +F +M  MG   D  SYNI+ING+CK K V++AL+L++EM+     
Sbjct: 246 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFP 305

Query: 184 -----------------------------SKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
                                         KGI+P + T N L      + Q+     + 
Sbjct: 306 PIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVL 365

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
            ++ +      T T NT I GLC  G + +A+     L     +L+  +Y  LI+G+CK 
Sbjct: 366 AKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKI 425

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G    A++L R +  R+   +V  Y+ +I  LC    + +A+ LF +M    ++ +V+ +
Sbjct: 426 GDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTY 485

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            TLI+GF  + K  + I LL++M  K + PD    +++VD L
Sbjct: 486 STLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDAL 527



 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 196/362 (54%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V+Y T+I+G+CK G    A  L  ++ G    P+V  Y+++I  LC     +EA  LF
Sbjct: 411 NQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLF 470

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM  +G+   VVT++ ++   C  GK+ EA  LL+ MV + + P+  TY+ L+D     
Sbjct: 471 SEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKE 530

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK+  A+ +   M     K D  +YN L+NGY    EV++A  ++  M   G+ P V TY
Sbjct: 531 GKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTY 590

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  G  +   V+ AL LF+EM + ++  DT TY++ +DGLCK+G I    +L   +  
Sbjct: 591 TILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRD 650

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D+  YN LIDGLCK+G L+ A+ LF  +  + +  +  T+ I++ GLC  G++  
Sbjct: 651 RGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKD 710

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A ++F D+       +V I+  +I+G  +     + + +L KM+E   +P+A    ++++
Sbjct: 711 AQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIIN 770

Query: 375 LL 376
            L
Sbjct: 771 AL 772



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/360 (33%), Positives = 188/360 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVT NT+I GLC +G V KA     ++  +    + V+Y +LI+G+C   D   A +L
Sbjct: 375 PSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKL 434

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++  +  +P+V  ++ I+D LCK   + EA  L   M  + +  +  TYSTL+ GFC+
Sbjct: 435 LRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCI 494

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A  L   M       D  +Y IL++   K  +V+EA S+   M+   +KP V T
Sbjct: 495 VGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFT 554

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G   +++V+ A  +F  M    V  D  TY   I+G CK+  + EA+ LF+ + 
Sbjct: 555 YNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMH 614

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D   Y+ L+DGLCKSGR+    +L   +  R   ADV+TYN +I GLC +G +D
Sbjct: 615 QKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLD 674

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA  LF  M++  + PN   F  L+ G  +  +     E+   +  K    D  I ++++
Sbjct: 675 KAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMI 734



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 186/397 (46%), Gaps = 34/397 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVT NT+I GLC +G V +A     ++  +    + V+Y +LI+G+C   D   A + 
Sbjct: 61  PDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKF 120

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++  +  +P+V  +N I+D LCK   + EA  L   M  + +  N  TYSTL+ GFC+
Sbjct: 121 LRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCI 180

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A  L   M       +  +YNIL++  CK  +V+EA S+   M+   +K  V+T
Sbjct: 181 VGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVIT 240

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+TL  G F +++V+ A  +F  M    V  D  +YN  I+G CK   + +A+ LF+ + 
Sbjct: 241 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMI 300

Query: 254 ILK----------------------------------CELDIQAYNCLIDGLCKSGRLEI 279
           + +                                   + D+   N LI+  C  G++  
Sbjct: 301 LSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITF 360

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
              +   + +R      VT N +I GLC  GQ+ KA      +       N + + TLI+
Sbjct: 361 GFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLIN 420

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           G  +I      I+LL K+  +   P+  + S ++D L
Sbjct: 421 GVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDAL 457



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 189/396 (47%), Gaps = 36/396 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +YN +I+G CK   VDKA  LF +M      P ++ +N ++        ++ A  L
Sbjct: 271 PDVHSYNIMINGFCKIKRVDKALNLFKEMILSRF-PPIIQFNKILDSFAKMKHYSTAVSL 329

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              +  +G+QP + T N++++  C  G++     +L  +++R   P+  T +TL+ G CL
Sbjct: 330 SHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCL 389

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++ +A      + + G + + VSY  LING CK  +   A+ L R++  +  KP V  
Sbjct: 390 KGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEM 449

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+T+   L +   V  A  LF EM    ++AD  TY+T I G C  G + EA+ L   + 
Sbjct: 450 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMV 509

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLE----------------------------------- 278
           +     D++ Y  L+D L K G+++                                   
Sbjct: 510 LKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVK 569

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A  +F ++    +  DV TY I+I+G C    +D+A +LF +M +  + P+ + + +L+
Sbjct: 570 KAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLV 629

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            G  +  + S V +L+ +M+++    D    + ++D
Sbjct: 630 DGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLID 665



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 155/280 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY  ++D L KEG V +AK++   M    + PDV TYN+L++G     +  +A+ +
Sbjct: 515 PDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHV 574

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   GV P V T+ ++++  CK+  +DEA  L   M Q+++ P+  TYS+L+DG C 
Sbjct: 575 FNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCK 634

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G+I+   +L   M   G   D ++YN LI+G CKN  +++A++L+ +M  +GI+P   T
Sbjct: 635 SGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFT 694

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  GL +  +++ A ++F+++       D   YN  I G CK G + EA+ +   + 
Sbjct: 695 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKME 754

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
              C  +   ++ +I+ L K    + A +L R +  R L+
Sbjct: 755 ENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 155/299 (51%), Gaps = 1/299 (0%)

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
           +++ +G  P  VT N ++  LC  G++ EA    D ++ +  + N  +Y+TL++G C  G
Sbjct: 53  KILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIG 112

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
               A +    ++    K +   YN +I+  CK + V EA  L+ EM  KGI   VVTY+
Sbjct: 113 DTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYS 172

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           TL  G   + +++ AL L   M    +  +  TYN  +D LCK G + EA  +   +   
Sbjct: 173 TLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKA 232

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
             + ++  Y+ L+DG      ++ A  +F ++    +  DV +YNIMI+G C   ++DKA
Sbjct: 233 CVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKA 292

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +LF +M  +   P +I F  ++  F ++   S  + L H+++ K + PD   ++++++
Sbjct: 293 LNLFKEMILSRFPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILIN 350



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 87/167 (52%)

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           +L +  ++ +     DT T NT I GLC  G + EA+     L     +L+  +Y  LI+
Sbjct: 47  SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           G+C+ G    A++  R +  R+   +V  YN +I  LC    + +A+ LF +M    ++ 
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           NV+ + TLI+GF  + K  + + LL+ M  K + P+    +++VD L
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDAL 213



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 99/200 (49%)

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           +LS+  +++ +G  P  VT NTL  GL    QV+ AL   +++       +  +Y T I+
Sbjct: 47  SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
           G+C+ G    A++  R +     + +++ YN +ID LCK   +  A  LF  +  + + A
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           +VVTY+ +I+G C  G++ +A  L   M    + PNV  +  L+    +  K  +   +L
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226

Query: 355 HKMKEKKVMPDASIVSMVVD 374
             M +  V  +    S ++D
Sbjct: 227 AVMLKACVKSNVITYSTLMD 246



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 60/103 (58%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PNT T+  ++DGLCK G +  A+ +F  +  +  + DV  YN +I+G C      EA  
Sbjct: 689 RPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALT 748

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           +  +M + G  P+ VTF++I++ L K  + D+A +LL  M+ R
Sbjct: 749 MLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIAR 791


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 134/364 (36%), Positives = 212/364 (58%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ V +  +ID LCK G VD A   F QM  E + P++  +NSL++GLC  + W +AK 
Sbjct: 410 SPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKE 469

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            +FEM++QG++P VV FN I+  LC  G++ +A RL+DLM +   RP+  +Y+TL+ G C
Sbjct: 470 FYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHC 529

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G+I+ A +    M S+G K D+ +YN L++GYC+   +++A  ++REM+  GI P VV
Sbjct: 530 LVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVV 589

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+T+  GLF   +   A +L+  M       +   YN  ++GL KN  + EA +LF++L
Sbjct: 590 TYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSL 649

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +L+I  +N +I  L KSGR E A+ LF ++    LV DV TY ++   L  +G +
Sbjct: 650 CSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYL 709

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++  DLF  ME++   PN  +   L+   +     ++    L K+ EK    +AS  +M+
Sbjct: 710 EEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAML 769

Query: 373 VDLL 376
           + LL
Sbjct: 770 ISLL 773



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 185/380 (48%), Gaps = 35/380 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY T+IDGLCK   VD+A+ +F QM  + + PD  TYN LIHG      W E  R
Sbjct: 235 QPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVR 294

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM   G++P   T+  +++ LC NG+  EA    D M+++ ++PN   Y  L+ G+ 
Sbjct: 295 MLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYA 354

Query: 133 LTGK-----------------------------------INRAEELFGSMESMGCKHDDV 157
             G                                    I+ A  +F  M+  G   D V
Sbjct: 355 TKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVV 414

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           ++  LI+  CK   V++A+  + +M+++G+ P +  +N+L  GL  + + E A + + EM
Sbjct: 415 NFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEM 474

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
               +  D   +NT +  LC  G +++A  L   +  +    D+ +Y  LI G C  GR+
Sbjct: 475 LNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRI 534

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A +    +    L  D  TYN ++HG C  G++D A+ +F +M  N + P V+ + T+
Sbjct: 535 DEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTI 594

Query: 338 IHGFVRINKPSKVIELLHKM 357
           +HG     + S+  EL   M
Sbjct: 595 LHGLFTTRRFSEAKELYLNM 614



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/357 (32%), Positives = 183/357 (51%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C PN V+Y T+I+G   EG VDKA  LFL+M    I P+VVTY ++I GLC A   +
Sbjct: 196 GRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVD 255

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A+ +F +M+D+GV+P   T+N ++      GK  E  R+L+ M    ++P+ +TY +L+
Sbjct: 256 RAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLL 315

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +  C  G+   A   F SM   G K +   Y ILI+GY     + E   L   MV  G+ 
Sbjct: 316 NYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLS 375

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P    +N +F    +   ++ A+ +F +M++  ++ D   +   ID LCK G + +AV  
Sbjct: 376 PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLK 435

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +       +I  +N L+ GLC   + E A E +  +  + +  DVV +N ++  LC 
Sbjct: 436 FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCT 495

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            GQ+ KA  L   ME     P+VI + TLI G   + +  +  + L  M    + PD
Sbjct: 496 KGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPD 552



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 174/357 (48%), Gaps = 3/357 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM---KGENINPDVVTYNSLIHGLCHANDWN 68
           C P+ V+YNT++ G C E   ++A  L   M   +G +  P+VV+Y ++I+G       +
Sbjct: 161 CTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVD 220

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  LF EMMD+G+QP+VVT+  ++D LCK   +D A  +   M+ + V+P+  TY+ L+
Sbjct: 221 KAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLI 280

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G+   GK      +   M + G K D  +Y  L+N  C N    EA   +  M+ KGIK
Sbjct: 281 HGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIK 340

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P V  Y  L  G      +     L   M  + ++ D   +N       K   I EA+ +
Sbjct: 341 PNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHI 400

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +       D+  +  LID LCK GR++ A+  F  +    +  ++  +N +++GLC 
Sbjct: 401 FNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCT 460

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             + +KA + + +M    + P+V+ F T++       +  K   L+  M+     PD
Sbjct: 461 VDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPD 517



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 181/373 (48%), Gaps = 8/373 (2%)

Query: 1   MANGNGEIGVVCKP----NTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYN 55
           + +G    G++ K     N +  N ++ GLC    + +A  + ++   E    PDVV+YN
Sbjct: 110 LEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYN 169

Query: 56  SLIHGLCHANDWNEAKRLFFEMMD---QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM 112
           +L+ G C+     EA  L   M D   +   P+VV++  +++     G++D+A  L   M
Sbjct: 170 TLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEM 229

Query: 113 VQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
           + R ++PN  TY+T++DG C    ++RAE +F  M   G K D+ +YN LI+GY    + 
Sbjct: 230 MDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKW 289

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           +E + +  EM + G+KP   TY +L   L    +   A   F+ M R  +  + + Y   
Sbjct: 290 KEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGIL 349

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           I G    G + E  +L   +       D   +N +     K   ++ A+ +F  + ++ L
Sbjct: 350 IHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGL 409

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
             DVV +  +I  LC  G++D A   F  M    VAPN+ +F +L++G   ++K  K  E
Sbjct: 410 SPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKE 469

Query: 353 LLHKMKEKKVMPD 365
              +M  + + PD
Sbjct: 470 FYFEMLNQGIRPD 482



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 171/350 (48%), Gaps = 13/350 (3%)

Query: 37  ALFLQMKGE---NINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIM 93
           +LF +M  E    + PD+ TY+ LI   C           F  ++  G + + +  N ++
Sbjct: 77  SLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLL 136

Query: 94  DELCKNGKMDEASRLLDLMVQR----DVRPNAFTYSTLMDGFCLTGKINRAEELFGSM-- 147
             LC   ++ EA   +D++++R       P+  +Y+TL+ GFC   +   A EL   M  
Sbjct: 137 KGLCDAKRLREA---MDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMAD 193

Query: 148 -ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
            +   C  + VSY  +ING+    +V++A +L+ EM+ +GI+P VVTY T+  GL +   
Sbjct: 194 SQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQV 253

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           V+ A  +F++M    V  D  TYN  I G    G   E V +   +     + D   Y  
Sbjct: 254 VDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGS 313

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           L++ LC +GR   A   F S+ R+ +  +V  Y I+IHG    G + + HDL   M EN 
Sbjct: 314 LLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENG 373

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           ++P+  IF  +   + +     + + + +KMK++ + PD      ++D L
Sbjct: 374 LSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDAL 423



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 115/241 (47%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V  KP+  TYNT++ G C+ G +D A  +F +M    I P VVTY++++HGL     +
Sbjct: 545 LSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRF 604

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +EAK L+  M+  G Q ++  +N+I++ L KN  +DEA +L   +  +D +    T++ +
Sbjct: 605 SEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIM 664

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +     +G+   A  LF ++ S G   D  +Y ++     +   +EE   L+  M   G 
Sbjct: 665 IGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGT 724

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P     N L   L     +  A     ++   + + + ST    I  L ++ Y   A  
Sbjct: 725 TPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATS 784

Query: 248 L 248
           L
Sbjct: 785 L 785



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 91/205 (44%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTY+TI+ GL       +AK L+L M       ++  YN +++GL   N  +EA +L
Sbjct: 586 PGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKL 645

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  +  +  Q  + TFN+++  L K+G+ ++A  L   +    + P+ FTY  + +    
Sbjct: 646 FQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIE 705

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +   ++LF +ME  G   +    N L+       ++  A +   ++  K       T
Sbjct: 706 EGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEAST 765

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQ 218
              L   L       HA  L E+ +
Sbjct: 766 TAMLISLLSRDEYHHHATSLPEKYR 790



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCK----NGYIVEA---VELFRTLGILKCEL 259
           ++ ALKLF+ +      A    +N  +  + +         E+   V LF  + I +C +
Sbjct: 30  LDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRM-IRECTI 88

Query: 260 ----DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
               D+  Y+ LI   C+ GRLE     F  + +     + +  N ++ GLC+  ++ +A
Sbjct: 89  KVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREA 148

Query: 316 HDLFLD-MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
            D+ +  M E    P+V+ + TL+ GF    +  + +ELLH M + +
Sbjct: 149 MDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQ 195


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 135/364 (37%), Positives = 211/364 (57%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ V Y  +ID LCK G VD A   F QM  E + P++  +NSL++GLC  + W +AK 
Sbjct: 410 SPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKE 469

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            +FEM++QG++P VV FN I+  LC  G++ +A RL+DLM +   RP   +Y+TL+ G C
Sbjct: 470 FYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHC 529

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G+I+ A +    M S+G K D+ +YN L++GYC+   +++A  ++REM+  GI P VV
Sbjct: 530 LVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVV 589

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+T+  GLF   +   A +L+  M       +   YN  ++GL KN  + EA +LF++L
Sbjct: 590 TYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSL 649

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +L+I  +N +I  L KSGR E A+ LF ++    LV DV TY ++   L  +G +
Sbjct: 650 CSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYL 709

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++  DLF  ME++   PN  +   L+   +     ++    L K+ EK    +AS  +M+
Sbjct: 710 EEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAML 769

Query: 373 VDLL 376
           + LL
Sbjct: 770 ISLL 773



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 185/380 (48%), Gaps = 35/380 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY T+IDGLCK   VD+A+ +F QM  + + PD  TYN LIHG      W E  R
Sbjct: 235 QPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVR 294

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM   G++P   T+  +++ LC NG+  EA  L D M+++ ++PN   Y  L+ G+ 
Sbjct: 295 MLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYA 354

Query: 133 LTGK-----------------------------------INRAEELFGSMESMGCKHDDV 157
             G                                    I+ A  +F  M+  G   D V
Sbjct: 355 TKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVV 414

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y  LI+  CK   V++A+  + +M+++G+ P +  +N+L  GL  + + E A + + EM
Sbjct: 415 NYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEM 474

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
               +  D   +NT +  LC  G +++A  L   +  +     + +Y  LI G C  GR+
Sbjct: 475 LNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRI 534

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A +    +    L  D  TYN ++HG C  G++D A+ +F +M  N + P V+ + T+
Sbjct: 535 DEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTI 594

Query: 338 IHGFVRINKPSKVIELLHKM 357
           +HG     + S+  EL   M
Sbjct: 595 LHGLFTTRRFSEAKELYLNM 614



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/357 (33%), Positives = 182/357 (50%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C PN V+Y  +I+G   EG VDKA  LFL+M    I P+VVTY ++I GLC A   +
Sbjct: 196 GRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVD 255

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A+ +F +M+D+GV+P   T+N ++      GK  E  R+L+ M    ++P+ +TY +L+
Sbjct: 256 RAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLL 315

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +  C  G+   A  LF SM   G K +   Y ILI+GY     + E   L   MV  G+ 
Sbjct: 316 NYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLS 375

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P    +N +F    +   ++ A+ +F +M++  ++ D   Y   ID LCK G + +AV  
Sbjct: 376 PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLK 435

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +       +I  +N L+ GLC   + E A E +  +  + +  DVV +N ++  LC 
Sbjct: 436 FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCT 495

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            GQ+ KA  L   ME     P VI + TLI G   + +  +  + L  M    + PD
Sbjct: 496 KGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPD 552



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 183/373 (49%), Gaps = 8/373 (2%)

Query: 1   MANGNGEIGVVCKP----NTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYN 55
           + +G    G++ K     N +  N ++ GLC    + +A  + ++   E    PDVV+YN
Sbjct: 110 LEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYN 169

Query: 56  SLIHGLCHANDWNEAKRLFFEMMD---QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM 112
           +L+ G C+     EA  L   M D   +   P+VV++ ++++     G++D+A  L   M
Sbjct: 170 TLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEM 229

Query: 113 VQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
           + R ++PN  TY+T++DG C    ++RAE +F  M   G K D+ +YN LI+GY    + 
Sbjct: 230 MDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKW 289

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           +E + +  EM + G+KP   TY +L   L    +   A  LF+ M R  +  + + Y   
Sbjct: 290 KEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGIL 349

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           I G    G + E  +L   +       D   +N +     K   ++ A+ +F  + ++ L
Sbjct: 350 IHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGL 409

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
             DVV Y  +I  LC  G++D A   F  M    VAPN+ +F +L++G   ++K  K  E
Sbjct: 410 SPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKE 469

Query: 353 LLHKMKEKKVMPD 365
              +M  + + PD
Sbjct: 470 FYFEMLNQGIRPD 482



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 172/350 (49%), Gaps = 13/350 (3%)

Query: 37  ALFLQMKGE---NINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIM 93
           +LF +M  E    + PD  TY+ LI   C           F  ++  G + + +  N ++
Sbjct: 77  SLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLL 136

Query: 94  DELCKNGKMDEASRLLDLMVQR----DVRPNAFTYSTLMDGFCLTGKINRAEELFGSM-- 147
             LC   ++ EA   +D++V+R       P+  +Y+TL+ GFC   +   A EL   M  
Sbjct: 137 KGLCDAKRLCEA---MDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMAD 193

Query: 148 -ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
            +   C  + VSY I+ING+    +V++A +L+ EM+ +GI+P VVTY T+  GL +   
Sbjct: 194 SQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQV 253

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           V+ A  +F++M    V  D  TYN  I G    G   E V +   +     + D   Y  
Sbjct: 254 VDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGS 313

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           L++ LC +GR   A  LF S+ R+ +  +V  Y I+IHG    G + + HDL   M EN 
Sbjct: 314 LLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENG 373

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           ++P+  IF  +   + +     + + + +KMK++ + PD      ++D L
Sbjct: 374 LSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDAL 423



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 115/241 (47%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V  KP+  TYNT++ G C+ G +D A  +F +M    I P VVTY++++HGL     +
Sbjct: 545 LSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRF 604

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +EAK L+  M+  G Q ++  +N+I++ L KN  +DEA +L   +  +D +    T++ +
Sbjct: 605 SEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIM 664

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +     +G+   A  LF ++ S G   D  +Y ++     +   +EE   L+  M   G 
Sbjct: 665 IGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGT 724

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P     N L   L     +  A     ++   + + + ST    I  L ++ Y   A  
Sbjct: 725 TPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATS 784

Query: 248 L 248
           L
Sbjct: 785 L 785



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 13/167 (7%)

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCK----NGYIVEA---VELFRTLGILKCEL 259
           ++ ALKLF+ +      A    +N  +  + +         E+   V LF  + I +C +
Sbjct: 30  LDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRM-IRECTI 88

Query: 260 DIQ----AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
            +      Y+ LI   C+ GRLE     F  + +     + +  N ++ GLC+  ++ +A
Sbjct: 89  KVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEA 148

Query: 316 HDLFLD-MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
            D+ +  M E    P+V+ + TL+ GF    +  + +ELLH M + +
Sbjct: 149 MDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQ 195


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 139/370 (37%), Positives = 215/370 (58%), Gaps = 1/370 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           IG   +P+ VTY T+I+GLCK G    A  L   M  +N  P+V  YN++I  LC     
Sbjct: 125 IGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQV 184

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA  LF EM+ +G+ P + T+N ++  LC   +    + LL+ MV   + P+  +++T+
Sbjct: 185 TEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 244

Query: 128 MDGFCLTGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           +D  C  GK+  A ++   M +  GC  + +SYN LINGYCK + +++A+ L+ EM  + 
Sbjct: 245 VDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 304

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P  VTY+TL  GL  + +++ A+ LF EM       +  TY   +D LCKN Y+ EA+
Sbjct: 305 LIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAM 364

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            L + +     + DIQ  N  IDG+C++G LE A +LF +L  + L  DV TY+IMI+GL
Sbjct: 365 ALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGL 424

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C  G +D+A  LF +M+EN    N  I+ T+  GF+R N+ S+ I+LL +M  +    DA
Sbjct: 425 CRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADA 484

Query: 367 SIVSMVVDLL 376
           S +++ V +L
Sbjct: 485 STMTLFVKML 494



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 185/346 (53%), Gaps = 3/346 (0%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D A + F +M      P  V +N L+  +      +    L  +M   G+ P++ T ++
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 92  IMDELC--KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
           +++  C    GK+ EA  L D M+    RP+  TY TL++G C  G  + A  L GSM  
Sbjct: 102 LINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 161

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
             C+ +  +YN +I+  CK+++V EA +L+ EMV+KGI P + TYN+L   L  + + +H
Sbjct: 162 KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKH 221

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF-RTLGILKCELDIQAYNCLI 268
              L  EM    +  D  ++NT +D LCK G + EA ++  + +    C  ++ +YN LI
Sbjct: 222 VATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLI 281

Query: 269 DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVA 328
           +G CK  R++ A+ LF  + R+ L+ D VTY+ +IHGLC+  ++  A  LF +M   +  
Sbjct: 282 NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI 341

Query: 329 PNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           PN++ +  L+    +    ++ + LL  ++   + PD  + ++ +D
Sbjct: 342 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAID 387



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 178/365 (48%), Gaps = 38/365 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN   YNTIID LCK+  V +A  LF +M  + I+PD+ TYNSLIH LC+  +W    
Sbjct: 164 CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVA 223

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR---------------- 115
            L  EM+D  + P VV+FN ++D LCK GK+ EA  ++D M+QR                
Sbjct: 224 TLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLING 283

Query: 116 --------------------DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHD 155
                               ++ P+  TYSTL+ G C   ++  A  LF  M +     +
Sbjct: 284 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 343

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
            V+Y IL++  CKN+ + EA++L + +    + P +   N    G+    ++E A  LF 
Sbjct: 344 LVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFS 403

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
            +    +  D  TY+  I+GLC+ G + EA +LFR +    C L+   YN +  G  ++ 
Sbjct: 404 NLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNN 463

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM--EENAVAPNVII 333
               A++L + +  R   AD  T  + +  L +DG       +  D   +++ +  NV++
Sbjct: 464 ETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRDFCKQKSWIYENVMV 523

Query: 334 FVTLI 338
              +I
Sbjct: 524 LQEII 528



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/222 (22%), Positives = 87/222 (39%), Gaps = 37/222 (16%)

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +++N         + ++ A+  F  M R      T  +N  +  + K  +    + L   
Sbjct: 27  LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEI--ALELFRSLPRRVLVADVVTYNIMIHG---- 305
           +       +I   + LI+  C   R +I  AL LF  +       DVVTY  +I+G    
Sbjct: 87  MDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKV 146

Query: 306 -------------------------------LCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
                                          LC D Q+ +A +LF +M    ++P++  +
Sbjct: 147 GNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTY 206

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +LIH    + +   V  LL++M + K+MPD    + VVD L
Sbjct: 207 NSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 248


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 141/366 (38%), Positives = 214/366 (58%), Gaps = 1/366 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY++++ GLCK G +D+A AL  +M     +P++VTYN++I G C     +EA 
Sbjct: 251 CSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAY 310

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+D G QP+VVT+ V++D  CK GK ++A  L+++MV++   PN FTY++L+D F
Sbjct: 311 HLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMF 370

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++ RA +L  SM   GC  + VSYN +I G CK  +V E + L  +M+S    P +
Sbjct: 371 CKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDI 430

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NT+   + + ++V+ A +LF  +Q      +  TYN+ + GLCK+    +A  L R 
Sbjct: 431 VTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLRE 490

Query: 252 LGILK-CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
           +   + C  DI  YN +IDGLCKS R++ A +LF  +    L  D VTY+I+I  LC   
Sbjct: 491 MTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWR 550

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            MD+A+++   M +N   P  I + TLI GF +     K +E+L  +  K   PD    S
Sbjct: 551 FMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFS 610

Query: 371 MVVDLL 376
           + +D L
Sbjct: 611 IFIDWL 616



 Score =  244 bits (622), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 135/402 (33%), Positives = 208/402 (51%), Gaps = 37/402 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN +TY T++DG C+ G +D A  L  +M      P+ +TYN+++HGLC     + A 
Sbjct: 145 CQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSAL 204

Query: 72  RLFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           +LF EM + G   P V T++ I+D L K+GK+D+A RL++ MV +   PN  TYS+L+ G
Sbjct: 205 QLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHG 264

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  GK++ A  L   M   GC  + V+YN +I+G+CK   ++EA  L  EMV  G +P 
Sbjct: 265 LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 324

Query: 191 VVTYNTLF------------LGLFEI-----------------------HQVEHALKLFE 215
           VVTY  L             +GL E+                        +VE A +L  
Sbjct: 325 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 384

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
            M +     +  +YNT I GLCK   + E V L   +    C  DI  +N +ID +CK+ 
Sbjct: 385 SMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTY 444

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM-EENAVAPNVIIF 334
           R++IA ELF  +       ++VTYN ++HGLC   + D+A  L  +M  +   +P++I +
Sbjct: 445 RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITY 504

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            T+I G  +  +  +  +L  +M    + PD    S+V+  L
Sbjct: 505 NTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSL 546



 Score =  237 bits (605), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 129/406 (31%), Positives = 210/406 (51%), Gaps = 36/406 (8%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+   C P++VTYNT+I+GL K   +D A  L  +M      P+V +YN+++HG C AN 
Sbjct: 35  EMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANR 94

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
              A  L  +M+ +G  P VV++  +++ LCK  ++DEA R++D M+QR  +PN  TY T
Sbjct: 95  VENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGT 154

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM---- 182
           L+DGFC  G ++ A EL   M   G + + ++YN +++G C  ++++ AL L++EM    
Sbjct: 155 LVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESG 214

Query: 183 --------------------------------VSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
                                           VSKG  P VVTY++L  GL +  +++ A
Sbjct: 215 SCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 274

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
             L + M R   + +  TYNT IDG CK G I EA  L   +    C+ ++  Y  L+D 
Sbjct: 275 TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDA 334

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
            CK G+ E A+ L   +  +  V ++ TYN ++   C   ++++A  L   M +    PN
Sbjct: 335 FCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPN 394

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           V+ + T+I G  +  K  + + LL +M     +PD    + ++D +
Sbjct: 395 VVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAM 440



 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/365 (33%), Positives = 202/365 (55%), Gaps = 5/365 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN VTY  ++D  CK G  + A  L   M  +   P++ TYNSL+   C  ++   A 
Sbjct: 321 CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERAC 380

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M+ +G  P+VV++N ++  LCK  K+ E   LL+ M+  +  P+  T++T++D  
Sbjct: 381 QLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAM 440

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPT 190
           C T +++ A ELF  ++  GC  + V+YN L++G CK++  ++A  L REM  K G  P 
Sbjct: 441 CKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPD 500

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           ++TYNT+  GL +  +V+ A KLF +M  D +A D  TY+  I  LCK  ++ EA  +  
Sbjct: 501 IITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLE 560

Query: 251 TLGILKCELDIQA--YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            +  LK   D  A  Y  LIDG CK+G L+ ALE+ + L  +    DVVT++I I  L  
Sbjct: 561 LM--LKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSK 618

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G++ +A +L   M    + P+ + + TL+ GF   ++    ++L   M++    PD + 
Sbjct: 619 RGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNAT 678

Query: 369 VSMVV 373
            + +V
Sbjct: 679 YTTLV 683



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 178/322 (55%), Gaps = 2/322 (0%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           + S++ GLC A   ++A  L F  M +   P  VT+N +++ L K+ ++D+A RLL+ MV
Sbjct: 13  HKSILRGLCDAGQCSDAV-LHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMV 71

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
                PN F+Y+T++ GFC   ++  A  L   M   GC  D VSY  +ING CK  +V+
Sbjct: 72  DNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVD 131

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           EA  +  +M+ +G +P V+TY TL  G   +  ++ A++L  +M       +  TYN  +
Sbjct: 132 EACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIM 191

Query: 234 DGLCKNGYIVEAVELFRTL-GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
            GLC    +  A++LF+ +     C  D+  Y+ ++D L KSG+++ A  L  ++  +  
Sbjct: 192 HGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGC 251

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
             +VVTY+ ++HGLC  G++D+A  L   M  +  +PN++ + T+I G  ++ +  +   
Sbjct: 252 SPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYH 311

Query: 353 LLHKMKEKKVMPDASIVSMVVD 374
           LL +M +    P+    ++++D
Sbjct: 312 LLEEMVDGGCQPNVVTYTVLLD 333



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 86/226 (38%), Positives = 136/226 (60%), Gaps = 1/226 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNEA 70
           C PN VTYN+++ GLCK    D+A+ L  +M + +  +PD++TYN++I GLC +   + A
Sbjct: 461 CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 520

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            +LF +M+  G+ P  VT+++++  LCK   MDEA+ +L+LM++    P A TY TL+DG
Sbjct: 521 YKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDG 580

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC TG +++A E+   + S G   D V+++I I+   K   + +A  L   M+  G+ P 
Sbjct: 581 FCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPD 640

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            VTYNTL  G  +  + E A+ LFE M++     D +TY T +  L
Sbjct: 641 TVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 686



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 91/261 (34%), Positives = 144/261 (55%), Gaps = 1/261 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT+NTIID +CK   VD A  LF  ++     P++VTYNSL+HGLC +  +++A+
Sbjct: 426 CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAE 485

Query: 72  RLFFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            L  EM   QG  P ++T+N ++D LCK+ ++D A +L   M+   + P+  TYS ++  
Sbjct: 486 YLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISS 545

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C    ++ A  +   M   G     ++Y  LI+G+CK   +++AL + + ++SKG  P 
Sbjct: 546 LCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPD 605

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVT++     L +  ++  A +L E M R  +  DT TYNT + G C      +AV+LF 
Sbjct: 606 VVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFE 665

Query: 251 TLGILKCELDIQAYNCLIDGL 271
            +    CE D   Y  L+  L
Sbjct: 666 VMRQCGCEPDNATYTTLVGHL 686


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 129/324 (39%), Positives = 199/324 (61%), Gaps = 2/324 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           EIG   +P+ V YN IID LCK   V+ A   F ++  + I P+VVTY +L++GLC++  
Sbjct: 183 EIGY--RPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGR 240

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           WN+A RL  +M+ + + P+V+T++ ++D   KNGK+ EA  + + MV+  + P+  TYS+
Sbjct: 241 WNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSS 300

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L++G CL  +I+ A ++F  M S GC  D VSYN LING+CK K VE+ + L+R+M  +G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRG 360

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +    VTYNTL  G F++  V+ A + F +M    V+ D  TYN  + GLC NG + +A+
Sbjct: 361 LVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKAL 420

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            +F  +   + +LDI  Y  +I G+CK+G++E A  LF SL  + L  D+VTY  M+ GL
Sbjct: 421 VIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGL 480

Query: 307 CNDGQMDKAHDLFLDMEENAVAPN 330
           C  G   +   L+  M++  +  N
Sbjct: 481 CTKGLQHEVEALYTKMKQEGLMKN 504



 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 125/359 (34%), Positives = 206/359 (57%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT  ++++G C+   V  A +L  +M      PD+V YN++I  LC     N+A  
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALD 211

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F E+  +G++P+VVT+  +++ LC +G+ ++A+RLL  M++R + PN  TYS L+D F 
Sbjct: 212 FFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFV 271

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A+E+F  M  M    D V+Y+ LING C +  ++EA  ++  MVSKG  P VV
Sbjct: 272 KNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVV 331

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNTL  G  +  +VE  +KLF +M +  +  +T TYNT I G  + G + +A E F  +
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQM 391

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  DI  YN L+ GLC +G LE AL +F  + +  +  D+VTY  +I G+C  G++
Sbjct: 392 DSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKV 451

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + A  LF  +    + P+++ + T++ G        +V  L  KMK++ +M + S++ +
Sbjct: 452 EDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDSMLCL 510



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 187/348 (53%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T+N +I+  C    V  A ++  +M      PD VT  SL++G C  N  ++A  L  +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           ++ G +P +V +N I+D LCK  ++++A      + ++ +RPN  TY+ L++G C +G+ 
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           N A  L   M       + ++Y+ L++ + KN +V EA  ++ EMV   I P +VTY++L
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSL 301

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL    +++ A ++F+ M       D  +YNT I+G CK   + + ++LFR +     
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGL 361

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             +   YN LI G  + G ++ A E F  +    +  D+ TYNI++ GLC++G ++KA  
Sbjct: 362 VNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALV 421

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +F DM+++ +  +++ + T+I G  +  K      L   +  K + PD
Sbjct: 422 IFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPD 469



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 190/360 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +N ++  + K    D   +L  +M+   I  D+ T+N +I+  C     + A  +
Sbjct: 83  PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSV 142

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+  G +P  VT   +++  C+  ++ +A  L+D MV+   RP+   Y+ ++D  C 
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCK 202

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           T ++N A + F  +   G + + V+Y  L+NG C +    +A  L R+M+ + I P V+T
Sbjct: 203 TRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVIT 262

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L     +  +V  A ++FEEM R  +  D  TY++ I+GLC +  I EA ++F  + 
Sbjct: 263 YSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D+ +YN LI+G CK+ R+E  ++LFR + +R LV + VTYN +I G    G +D
Sbjct: 323 SKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVD 382

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA + F  M+   V+P++  +  L+ G        K + +   M++ ++  D    + V+
Sbjct: 383 KAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVI 442



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 169/328 (51%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           LF +M      P +V +N L+  +     ++    L  +M   G++  + TFN++++  C
Sbjct: 72  LFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
              ++  A  +L  M++    P+  T  +L++GFC   +++ A  L   M  +G + D V
Sbjct: 132 CCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIV 191

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +YN +I+  CK + V +AL  ++E+  KGI+P VVTY  L  GL    +   A +L  +M
Sbjct: 192 AYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDM 251

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
            +  +  +  TY+  +D   KNG ++EA E+F  +  +  + DI  Y+ LI+GLC   R+
Sbjct: 252 IKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A ++F  +  +    DVV+YN +I+G C   +++    LF  M +  +  N + + TL
Sbjct: 312 DEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTL 371

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPD 365
           I GF ++    K  E   +M    V PD
Sbjct: 372 IQGFFQVGDVDKAQEFFSQMDSFGVSPD 399



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 159/293 (54%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  LF EM+     PS+V FN ++  + K  K D    L   M    +R + +T++ +
Sbjct: 67  HDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIV 126

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++ FC   +++ A  + G M  +G + D V+   L+NG+C+   V +A+SL  +MV  G 
Sbjct: 127 INCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P +V YN +   L +  +V  AL  F+E+ R  +  +  TY   ++GLC +G   +A  
Sbjct: 187 RPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAAR 246

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L R +   K   ++  Y+ L+D   K+G++  A E+F  + R  +  D+VTY+ +I+GLC
Sbjct: 247 LLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLC 306

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
              ++D+A+ +F  M      P+V+ + TLI+GF +  +    ++L  KM ++
Sbjct: 307 LHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQR 359



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 135/265 (50%)

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K+ +A  L   MV+    P+   ++ L+       K +    L   ME +G ++D  ++N
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           I+IN +C   +V  ALS+  +M+  G +P  VT  +L  G    ++V  A+ L ++M   
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
               D   YN  ID LCK   + +A++ F+ +G      ++  Y  L++GLC SGR   A
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
             L R + +R +  +V+TY+ ++     +G++ +A ++F +M   ++ P+++ + +LI+G
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304

Query: 341 FVRINKPSKVIELLHKMKEKKVMPD 365
               ++  +  ++   M  K   PD
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCFPD 329



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 122/241 (50%)

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           K++ A  LF  M         V +N L++   K K+ +  +SL ++M   GI+  + T+N
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
            +        QV  AL +  +M +     D  T  + ++G C+   + +AV L   +  +
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
               DI AYN +ID LCK+ R+  AL+ F+ + R+ +  +VVTY  +++GLCN G+ + A
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
             L  DM +  + PNVI +  L+  FV+  K  +  E+  +M    + PD    S +++ 
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304

Query: 376 L 376
           L
Sbjct: 305 L 305


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 136/364 (37%), Positives = 206/364 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V Y+TI+DGLCK+G V +A  L  +M G+ + P++VTY  LI GLC+   W EA  
Sbjct: 214 KPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGS 273

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EMM  G++P +   N+++D  CK GK+ +A  ++  M+     P+ FTY++L+  +C
Sbjct: 274 LLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYC 333

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L  K+N A  +F  M S G   D V +  LI+G+CK+K + +A+ L  EM   G  P V 
Sbjct: 334 LQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVA 393

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+ TL  G  +  +   A +LF  M +     +  T    +DGLCK   + EAV L + +
Sbjct: 394 TWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAM 453

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +L+I  Y+ L+DG+C +G+L  A ELF SLP + L  +V  Y IMI GLC  G +
Sbjct: 454 EKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSL 513

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           DKA DL ++MEEN   PN   +   + G +   + ++ I+ L  M++K    DA+    +
Sbjct: 514 DKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFI 573

Query: 373 VDLL 376
           ++ L
Sbjct: 574 INYL 577



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 165/352 (46%), Gaps = 4/352 (1%)

Query: 26  LCKEGF---VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQ-G 81
           LC  G    +D+A  LF  M      P V  +  L+  +     +  A  L   M    G
Sbjct: 48  LCWSGKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLG 107

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
           ++   +T N++++ LC+   +     +L  M +  + P   T +TL++G C+ G + +A 
Sbjct: 108 IEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAV 167

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
            L   ME M    D  +Y +LING CK  +   A+   R+M  +  KP VV Y+T+  GL
Sbjct: 168 GLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGL 227

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
            +   V  AL L  EM    V  +  TY   I GLC  G   EA  L   +  +    D+
Sbjct: 228 CKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDL 287

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
           Q  N L+D  CK G++  A  +   +       DV TYN +IH  C   +M++A  +F  
Sbjct: 288 QMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHL 347

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           M      P++++F +LIHG+ +    +K + LL +M +   +PD +  + ++
Sbjct: 348 MVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLI 399



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 168/362 (46%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + +T+T N +I+ LC+   V    ++   M    + P V+T  +LI+GLC   +  +A  
Sbjct: 109 EADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVG 168

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M        V T+ V+++ LCK G    A   L  M +R+ +PN   YST+MDG C
Sbjct: 169 LADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLC 228

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A  L   M   G + + V+Y  LI G C     +EA SL  EM+  G++P + 
Sbjct: 229 KDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQ 288

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
             N L     +  +V  A  +   M       D  TYN+ I   C    + EA+ +F  +
Sbjct: 289 MLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLM 348

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  DI  +  LI G CK   +  A+ L   + +   V DV T+  +I G C  G+ 
Sbjct: 349 VSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRP 408

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A +LFL+M +    PN+     ++ G  + N  S+ + L   M++  +  +  I S++
Sbjct: 409 LAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSIL 468

Query: 373 VD 374
           +D
Sbjct: 469 LD 470



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/226 (33%), Positives = 110/226 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V + ++I G CK+  ++KA  L  +M      PDV T+ +LI G C A     AK L
Sbjct: 355 PDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKEL 414

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   G  P++ T  VI+D LCK   + EA  L   M + ++  N   YS L+DG C 
Sbjct: 415 FLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCS 474

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+N A ELF S+   G + +   Y I+I G CK   +++A  L   M   G  P   T
Sbjct: 475 AGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCT 534

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
           YN    GL    ++  ++K    M+    + D +T    I+ L  N
Sbjct: 535 YNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYLSTN 580



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 128/288 (44%), Gaps = 39/288 (13%)

Query: 91  VIMDELCKNGKM---DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
           + M  LC +GK+   DEA  L   M +    P+   ++ L+           A  L   M
Sbjct: 43  ISMRNLCWSGKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHM 102

Query: 148 -ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
             S+G + D ++ NI+IN  C+ K V    S+   M   G++PTV+T  TL         
Sbjct: 103 FSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTL--------- 153

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
                                     I+GLC  G + +AV L   +  +   LD+  Y  
Sbjct: 154 --------------------------INGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGV 187

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LI+GLCK+G    A+   R +  R    +VV Y+ ++ GLC DG + +A +L  +M    
Sbjct: 188 LINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKG 247

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           V PN++ +  LI G     +  +   LL +M +  + PD  +++++VD
Sbjct: 248 VRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVD 295


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 135/330 (40%), Positives = 205/330 (62%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + KPN V Y+TIID LCK   V +A  LF +M  + I+ DVVTY++LI+G C      
Sbjct: 192 GRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLK 251

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  L  EM+ + + P+V T+N+++D LCK GK+ EA  +L +M++  V+P+  TYSTLM
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM 311

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+ L  ++ +A+ +F +M  MG   D  +Y ILING+CKNK V+EAL+L++EM  K + 
Sbjct: 312 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P +VTY++L  GL +  ++ +   L +EM      A+  TY++ IDGLCKNG++  A+ L
Sbjct: 372 PGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIAL 431

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +       +   +  L+DGLCK GRL+ A E+F+ L  +    +V TYN+MI G C 
Sbjct: 432 FNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCK 491

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            G +++A  +   ME+N   P+ + F  +I
Sbjct: 492 QGLLEEALTMLSKMEDNGCIPDAVTFEIII 521



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/361 (33%), Positives = 193/361 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVT NT+I GLC +G V KA     ++  +    + V+Y +LI+G+C   D   A +L
Sbjct: 127 PDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKL 186

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++  +  +P+VV ++ I+D LCK   + EA  L   M  + +  +  TYSTL+ GFC+
Sbjct: 187 LQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCI 246

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A  L   M       +  +YNIL++  CK  +V+EA S+   M+   +KP V+T
Sbjct: 247 EGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+TL  G F +++V+ A  +F  M    V  D  TY   I+G CKN  + EA+ LF+ + 
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  I  Y+ LIDGLCKSGR+    +L   +  R   A+V+TY+ +I GLC +G +D
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLD 426

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  LF  M++  + PN   F  L+ G  +  +     E+   +  K    +    ++++
Sbjct: 427 RAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMI 486

Query: 374 D 374
           D
Sbjct: 487 D 487



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 194/359 (54%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V+Y T+I+G+CK G    A  L  ++ G    P+VV Y+++I  LC     +EA  LF
Sbjct: 163 NQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLF 222

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM  +G+   VVT++ ++   C  GK+ EA  LL+ MV + + PN +TY+ L+D  C  
Sbjct: 223 SEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKE 282

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK+  A+ +   M     K D ++Y+ L++GY    EV++A  ++  M   G+ P V TY
Sbjct: 283 GKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTY 342

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  G  +   V+ AL LF+EM + ++     TY++ IDGLCK+G I    +L   +  
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHD 402

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                ++  Y+ LIDGLCK+G L+ A+ LF  +  + +  +  T+ I++ GLC  G++  
Sbjct: 403 RGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKD 462

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A ++F D+       NV  +  +I G  +     + + +L KM++   +PDA    +++
Sbjct: 463 AQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIII 521



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 190/364 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ +T N +I+  C  G +    ++  ++      PD VT N+LI GLC      +A  
Sbjct: 91  QPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALH 150

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +++ QG Q + V++  +++ +CK G    A +LL  +  R  +PN   YST++D  C
Sbjct: 151 FHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALC 210

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               ++ A  LF  M   G   D V+Y+ LI G+C   +++EA+ L  EMV K I P V 
Sbjct: 211 KYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVY 270

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L   L +  +V+ A  +   M +  V  D  TY+T +DG      + +A  +F  +
Sbjct: 271 TYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAM 330

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            ++    D+  Y  LI+G CK+  ++ AL LF+ + ++ +V  +VTY+ +I GLC  G++
Sbjct: 331 SLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
               DL  +M +     NVI + +LI G  +     + I L +KMK++ + P+    +++
Sbjct: 391 PYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTIL 450

Query: 373 VDLL 376
           +D L
Sbjct: 451 LDGL 454



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 156/292 (53%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + VTY+T+I G C EG + +A  L  +M  + INP+V TYN L+  LC      EAK + 
Sbjct: 233 DVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVL 292

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M+   V+P V+T++ +MD      ++ +A  + + M    V P+  TY+ L++GFC  
Sbjct: 293 AVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKN 352

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
             ++ A  LF  M         V+Y+ LI+G CK+  +     L  EM  +G    V+TY
Sbjct: 353 KMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITY 412

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           ++L  GL +   ++ A+ LF +M+   +  +T T+   +DGLCK G + +A E+F+ L  
Sbjct: 413 SSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLT 472

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
               L++  YN +IDG CK G LE AL +   +     + D VT+ I+I  L
Sbjct: 473 KGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIAL 524



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 175/345 (50%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           VD A + F +M      P ++ +N ++        ++ A  L   +  +G+QP ++T N+
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C  G++     +L  +++R   P+  T +TL+ G CL G++ +A      + + G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + + VSY  LING CK  +   A+ L +++  +  KP VV Y+T+   L +   V  A 
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAY 219

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            LF EM    ++AD  TY+T I G C  G + EA+ L   + +     ++  YN L+D L
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           CK G+++ A  +   + +  +  DV+TY+ ++ G     ++ KA  +F  M    V P+V
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +  LI+GF +     + + L  +M +K ++P     S ++D L
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 145/260 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN ++D LCKEG V +AK++   M    + PDV+TY++L+ G     +  +A+ +
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   GV P V T+ ++++  CKN  +DEA  L   M Q+++ P   TYS+L+DG C 
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G+I    +L   M   G   + ++Y+ LI+G CKN  ++ A++L+ +M  +GI+P   T
Sbjct: 387 SGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFT 446

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  GL +  +++ A ++F+++       +  TYN  IDG CK G + EA+ +   + 
Sbjct: 447 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKME 506

Query: 254 ILKCELDIQAYNCLIDGLCK 273
              C  D   +  +I  L K
Sbjct: 507 DNGCIPDAVTFEIIIIALFK 526



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 136/258 (52%), Gaps = 2/258 (0%)

Query: 67   WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            ++ A  L   +  +G+QP + T N++++  C  G++     +L  +++R   P+  T++T
Sbjct: 942  YSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTT 1001

Query: 127  LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
            L++G CL G++N+A      + + G + + VSY  LING CK  +   A+ L R++  + 
Sbjct: 1002 LINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRL 1061

Query: 187  IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
             KP VV YNT+   L +   V  A  LF EM    ++AD  TYNT I G C  G + EA+
Sbjct: 1062 TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAI 1121

Query: 247  ELFRTLGILKCELDIQAYNCLIDGLCKSGR--LEIALELFRSLPRRVLVADVVTYNIMIH 304
             L   + +     +++ YN L+D LCK G+  L+ +L +   +      A+ VT+ I+I 
Sbjct: 1122 GLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIIS 1181

Query: 305  GLCNDGQMDKAHDLFLDM 322
             L    + DK   L  +M
Sbjct: 1182 ALFEKDENDKVEKLLHEM 1199



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/226 (33%), Positives = 126/226 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ +TY+T++DG      V KA+ +F  M    + PDV TY  LI+G C     +EA  
Sbjct: 301 KPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALN 360

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  + + P +VT++ ++D LCK+G++     L+D M  R    N  TYS+L+DG C
Sbjct: 361 LFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLC 420

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++RA  LF  M+  G + +  ++ IL++G CK   +++A  +++++++KG    V 
Sbjct: 421 KNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVY 480

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
           TYN +  G  +   +E AL +  +M+ +    D  T+   I  L K
Sbjct: 481 TYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFK 526



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 128/245 (52%), Gaps = 2/245 (0%)

Query: 115  RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
            + ++P+ FT + L++ FC  G+I     +   +   G   D +++  LING C   +V +
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 175  ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
            AL  + +++++G +   V+Y TL  G+ +I     A+KL  ++       D   YNT ID
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 235  GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
             LCK+  + +A  LF  + +     D+  YN LI G C  G+L+ A+ L   +  + +  
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 295  DVVTYNIMIHGLCNDGQ--MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
            +V TYNI++  LC +G+  +D++  +   ME+N    N + F  +I      ++  KV +
Sbjct: 1135 NVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEK 1194

Query: 353  LLHKM 357
            LLH+M
Sbjct: 1195 LLHEM 1199



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 2/201 (0%)

Query: 40   LQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKN 99
            L++KG  I PD+ T N LI+  CH         +  +++ +G  P  +TF  +++ LC  
Sbjct: 952  LELKG--IQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLK 1009

Query: 100  GKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
            G++++A    D ++ +  + N  +Y TL++G C  G    A +L   ++    K D V Y
Sbjct: 1010 GQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMY 1069

Query: 160  NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
            N +I+  CK++ V +A  L+ EM  KGI   VVTYNTL  G   + +++ A+ L  +M  
Sbjct: 1070 NTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVL 1129

Query: 220  DDVAADTSTYNTFIDGLCKNG 240
              +  +  TYN  +D LCK G
Sbjct: 1130 KTINPNVRTYNILVDALCKEG 1150



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 88/158 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTY+++IDGLCK G +     L  +M       +V+TY+SLI GLC     + A  L
Sbjct: 372 PGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIAL 431

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M DQG++P+  TF +++D LCK G++ +A  +   ++ +    N +TY+ ++DG C 
Sbjct: 432 FNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCK 491

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
            G +  A  +   ME  GC  D V++ I+I    K  E
Sbjct: 492 QGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDE 529



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 107/207 (51%)

Query: 170  KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
            K    A+SL   +  KGI+P + T N L      + Q+     +  ++ +     DT T+
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 230  NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
             T I+GLC  G + +A+     L     +L+  +Y  LI+G+CK G    A++L R +  
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059

Query: 290  RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
            R+   DVV YN +I  LC    + KA+ LF +M    ++ +V+ + TLI+GF  + K  +
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKE 1119

Query: 350  VIELLHKMKEKKVMPDASIVSMVVDLL 376
             I LL+KM  K + P+    +++VD L
Sbjct: 1120 AIGLLNKMVLKTINPNVRTYNILVDAL 1146



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 118/226 (52%), Gaps = 2/226 (0%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            +P+  T N +I+  C  G +    ++  ++     +PD +T+ +LI+GLC     N+A  
Sbjct: 958  QPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALH 1017

Query: 73   LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
               +++ QG Q + V++  +++ +CK G    A +LL  +  R  +P+   Y+T++D  C
Sbjct: 1018 FHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALC 1077

Query: 133  LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                +++A  LF  M   G   D V+YN LI G+C   +++EA+ L  +MV K I P V 
Sbjct: 1078 KHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVR 1137

Query: 193  TYNTLFLGLFEIHQ--VEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            TYN L   L +  +  ++ +L +  +M+ +   A+  T+   I  L
Sbjct: 1138 TYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 116/239 (48%), Gaps = 2/239 (0%)

Query: 140  AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
            A  L   +E  G + D  + NILIN +C   ++    S+  +++ +G  P  +T+ TL  
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 200  GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
            GL    QV  AL   +++       +  +Y T I+G+CK G    A++L R +     + 
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 260  DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
            D+  YN +ID LCK   +  A  LF  +  + + ADVVTYN +I+G C  G++ +A  L 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 320  LDMEENAVAPNVIIFVTLIHGFVRINKP--SKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              M    + PNV  +  L+    +  K    + + +L KM++     +A    +++  L
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)

Query: 9    GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
            G + KP+ V YNTIID LCK   V KA  LF +M  + I+ DVVTYN+LI+G C      
Sbjct: 1059 GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLK 1118

Query: 69   EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK--MDEASRLLDLMVQRDVRPNAFTYST 126
            EA  L  +M+ + + P+V T+N+++D LCK GK  +DE+  +L  M     + NA T+  
Sbjct: 1119 EAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEI 1178

Query: 127  LMDGFCLTGKINRAEELFGSMESMG 151
            ++       + ++ E+L   M + G
Sbjct: 1179 IISALFEKDENDKVEKLLHEMIARG 1203



 Score = 44.3 bits (103), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 2/71 (2%)

Query: 14   PNTVTYNTIIDGLCKEG--FVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            PN  TYN ++D LCKEG   +D++ ++  +M+      + VT+  +I  L   ++ ++ +
Sbjct: 1134 PNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVE 1193

Query: 72   RLFFEMMDQGV 82
            +L  EM+ +G+
Sbjct: 1194 KLLHEMIARGL 1204


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 129/317 (40%), Positives = 197/317 (62%), Gaps = 3/317 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V YNTIIDG CK G V+ A  LF +M+ + +  D VTYNSL+ GLC +  W++A R
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ + + P+V+TF  ++D   K GK  EA +L + M +R V P+ FTY++L++G C
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + G+++ A+++   M + GC  D V+YN LING+CK+K V+E   L+REM  +G+    +
Sbjct: 291 MHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 350

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNT+  G F+  + + A ++F  M   D   +  TY+  + GLC N  + +A+ LF  +
Sbjct: 351 TYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENM 407

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + ELDI  YN +I G+CK G +E A +LFRSL  + L  DVV+Y  MI G C   Q 
Sbjct: 408 QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQW 467

Query: 313 DKAHDLFLDMEENAVAP 329
           DK+  L+  M+E+ + P
Sbjct: 468 DKSDLLYRKMQEDGLLP 484



 Score =  231 bits (588), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 130/352 (36%), Positives = 197/352 (55%), Gaps = 3/352 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT +++I+G C+   V  A  L  +M+     PDVV YN++I G C     N+A  
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M   GV+   VT+N ++  LC +G+  +A+RL+  MV RD+ PN  T++ ++D F 
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV 255

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK + A +L+  M       D  +YN LING C +  V+EA  +   MV+KG  P VV
Sbjct: 256 KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVV 315

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  +  +V+   KLF EM +  +  DT TYNT I G  + G    A E+F  +
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +I+ Y+ L+ GLC + R+E AL LF ++ +  +  D+ TYNI+IHG+C  G +
Sbjct: 376 ---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           + A DLF  +    + P+V+ + T+I GF R  +  K   L  KM+E  ++P
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 199/374 (53%), Gaps = 10/374 (2%)

Query: 7   EIGVVCK-------PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIH 59
           EI + CK       P+ V ++ ++  + K    D   +LF  M+   I  D+ +YN +I+
Sbjct: 53  EIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVIN 112

Query: 60  GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
            LC  + +  A  +  +MM  G +P VVT + +++  C+  ++ +A  L+  M +   RP
Sbjct: 113 CLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRP 172

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           +   Y+T++DG C  G +N A ELF  ME  G + D V+YN L+ G C +    +A  L 
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
           R+MV + I P V+T+  +     +  +   A+KL+EEM R  V  D  TYN+ I+GLC +
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 292

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G + EA ++   +    C  D+  YN LI+G CKS R++   +LFR + +R LV D +TY
Sbjct: 293 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 352

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           N +I G    G+ D A ++F  M+     PN+  +  L++G     +  K + L   M++
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQK 409

Query: 360 KKVMPDASIVSMVV 373
            ++  D +  ++V+
Sbjct: 410 SEIELDITTYNIVI 423



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 130/264 (49%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           ++E   L   M+Q    P+   +S ++     +   +    LF  ME  G  HD  SYNI
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           +IN  C+      ALS+  +M+  G +P VVT ++L  G  + ++V  A+ L  +M+   
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              D   YNT IDG CK G + +AVELF  +       D   YN L+ GLC SGR   A 
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            L R +  R +V +V+T+  +I     +G+  +A  L+ +M    V P+V  + +LI+G 
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289

Query: 342 VRINKPSKVIELLHKMKEKKVMPD 365
               +  +  ++L  M  K  +PD
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPD 313



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 98/205 (47%)

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           +EE + L+ +M+     P++V ++ +   + +    +  + LF  M+   +  D  +YN 
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            I+ LC+    V A+ +   +     E D+   + LI+G C+  R+  A++L   +    
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
              DVV YN +I G C  G ++ A +LF  ME + V  + + + +L+ G     + S   
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 352 ELLHKMKEKKVMPDASIVSMVVDLL 376
            L+  M  + ++P+    + V+D+ 
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVF 254


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  261 bits (668), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 124/363 (34%), Positives = 210/363 (57%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYNT++ GLC+ G +D+A  L  +M+   + PD  +Y++L+ GLC     + A 
Sbjct: 108 CMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMAL 167

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++F +  +    P VV ++ ++  LCK G++DEA +L + M +    P+  T++ LMDG 
Sbjct: 168 KVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGL 227

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++  A+++  +ME   C  + ++Y+ LI+G CK  +V +A  +++ M+ +GI+P V
Sbjct: 228 CKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNV 287

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN+L  G    + V+ AL L EEM       D  TYNT IDGLCK G   EA  LF  
Sbjct: 288 VTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGD 347

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  D+  Y+CLI G CK  R+++A  LF  + ++ ++ DVVT++ ++ G CN G 
Sbjct: 348 MKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGL 407

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D A  L  +M  +  +P+V  + +L+ GF ++ +  +   +L +M ++   P+    + 
Sbjct: 408 VDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTA 467

Query: 372 VVD 374
           ++D
Sbjct: 468 LID 470



 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 132/361 (36%), Positives = 210/361 (58%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN +I+G CK   V +A  L  +MK   + P+VVTY+++IHG C     + A +L
Sbjct: 40  PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKL 99

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M++ G  P++VT+N ++  LC+NG MDEA  LLD M +R ++P+ F+Y TLM G C 
Sbjct: 100 FRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK 159

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TGKI+ A ++F    +  C  D V+Y+ LI G CK   ++EA  L+ +M     +P VVT
Sbjct: 160 TGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVT 219

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  GL +  +++ A ++ E M+  +   +  TY++ IDGLCK G + +A E+F+ + 
Sbjct: 220 FTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI 279

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   E ++  YN LI G C +  ++ AL L   +     + D++TYN +I GLC  G+  
Sbjct: 280 VRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAP 339

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A+ LF DM+     P+VI +  LI GF ++ +      L   M ++ V+PD    S +V
Sbjct: 340 EANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 399

Query: 374 D 374
           +
Sbjct: 400 E 400



 Score =  244 bits (624), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 122/356 (34%), Positives = 201/356 (56%), Gaps = 4/356 (1%)

Query: 3   NGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC 62
           N NG+    C P+ V Y+T+I GLCK G +D+A  LF +M+  +  PDVVT+ +L+ GLC
Sbjct: 173 NSNGD----CPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLC 228

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
             +   EA+++   M D+   P+V+T++ ++D LCK G++ +A  +   M+ R + PN  
Sbjct: 229 KGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVV 288

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TY++L+ GFC+T  ++ A  L   M + GC  D ++YN LI+G CK     EA  L+ +M
Sbjct: 289 TYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDM 348

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
            +K   P V+TY+ L  G  ++ +++ A  LF++M +  V  D  T++T ++G C  G +
Sbjct: 349 KAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLV 408

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            +A  L   +    C  D+  Y  L+DG CK GR+  A  + + + +R    +VVTY  +
Sbjct: 409 DDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTAL 468

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           I   C  G+   A+ L  +M  N V PNVI + +LI GF       +  ++L +++
Sbjct: 469 IDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLE 524



 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 124/362 (34%), Positives = 197/362 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N +T+  +IDGLCK   + +A   F +MK +   P+  TYN LI+G C  +  + A 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM + G+ P+VVT++ ++   C+  K+D A +L   MV+    PN  TY+TL+ G 
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G ++ A EL   M   G + D  SY+ L+ G CK  +++ AL ++ +  +    P V
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V Y+TL  GL +  +++ A KLFE+M+ +    D  T+   +DGLCK   + EA ++  T
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  ++  Y+ LIDGLCK+G++  A E+F+ +  R +  +VVTYN +IHG C    
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 302

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D A  L  +M      P++I + TLI G  +  +  +   L   MK K   PD    S 
Sbjct: 303 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 362

Query: 372 VV 373
           ++
Sbjct: 363 LI 364



 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 202/359 (56%), Gaps = 3/359 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ VT+  ++DGLCK   + +A+ +   M+  N  P+V+TY+SLI GLC      +A+
Sbjct: 213 CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQ 272

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M+ +G++P+VVT+N ++   C    +D A  L++ M      P+  TY+TL+DG 
Sbjct: 273 EVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGL 332

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C TG+   A  LFG M++  C  D ++Y+ LI G+CK + ++ A +L+ +M+ + + P V
Sbjct: 333 CKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDV 392

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT++TL  G      V+ A +L EEM   D + D  TY + +DG CK G +VEA  + + 
Sbjct: 393 VTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKR 452

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ ++  Y  LID  C++G+  +A +L   +    +  +V+TY  +I G C  G 
Sbjct: 453 MAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGD 512

Query: 312 MDKAHDLF--LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           +++A  +   L+ +EN  A ++  +  ++ G  R  + S  +ELL  +K+    P   I
Sbjct: 513 LEEARKMLERLERDENCKA-DMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDI 570



 Score =  227 bits (578), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 118/327 (36%), Positives = 185/327 (56%)

Query: 50  DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
           +V+T+  +I GLC AN   EA   F +M  +G  P+  T+NV+++  CK  K+  A  LL
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
             M +  + PN  TYST++ GFC   K++ A +LF  M   GC  + V+YN L++G C+N
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
             ++EA  L  EM  +G++P   +Y+TL  GL +  +++ ALK+FE+    D   D   Y
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           +T I GLCK G + EA +LF  +    CE D+  +  L+DGLCK  RL+ A ++  ++  
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
           R    +V+TY+ +I GLC  GQ+  A ++F  M    + PNV+ + +LIHGF   N    
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 305

Query: 350 VIELLHKMKEKKVMPDASIVSMVVDLL 376
            + L+ +M     +PD    + ++D L
Sbjct: 306 ALLLMEEMTATGCLPDIITYNTLIDGL 332



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 121/227 (53%)

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
           M C+ + +++ I+I+G CK   + EA + + +M  KG  P   TYN L  G  ++H+V  
Sbjct: 1   MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           A  L +EM+   +A +  TY+T I G C+   +  A +LFR +    C  ++  YN L+ 
Sbjct: 61  AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           GLC++G ++ A EL   +  R L  D  +Y+ ++ GLC  G++D A  +F D       P
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 180

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +V+ + TLI G  +  +  +  +L  KM+E    PD    + ++D L
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGL 227



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 115/241 (47%), Gaps = 37/241 (15%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT++T+++G C  G VD A+ L  +M   + +PDV TY SL+ G C      EA+R+
Sbjct: 390 PDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRV 449

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL------ 127
              M  +G QP+VVT+  ++D  C+ GK   A +LL+ MV   V+PN  TY +L      
Sbjct: 450 LKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCG 509

Query: 128 ------------------------------MDGFCLTGKINRAEELFGSMESMGCKHDDV 157
                                         MDG C TG+++ A EL  +++  G      
Sbjct: 510 TGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHD 569

Query: 158 SYNILINGYCKNKEVEEALSLYREM-VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            Y  LI G C+ KE+ +A+ +  EM +S+  +P    Y  +   L    + E A  L +E
Sbjct: 570 IYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADE 629

Query: 217 M 217
           +
Sbjct: 630 L 630


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  261 bits (668), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 129/317 (40%), Positives = 197/317 (62%), Gaps = 3/317 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V YNTIIDG CK G V+ A  LF +M+ + +  D VTYNSL+ GLC +  W++A R
Sbjct: 112 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 171

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ + + P+V+TF  ++D   K GK  EA +L + M +R V P+ FTY++L++G C
Sbjct: 172 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 231

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + G+++ A+++   M + GC  D V+YN LING+CK+K V+E   L+REM  +G+    +
Sbjct: 232 MHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 291

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNT+  G F+  + + A ++F  M   D   +  TY+  + GLC N  + +A+ LF  +
Sbjct: 292 TYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENM 348

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + ELDI  YN +I G+CK G +E A +LFRSL  + L  DVV+Y  MI G C   Q 
Sbjct: 349 QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQW 408

Query: 313 DKAHDLFLDMEENAVAP 329
           DK+  L+  M+E+ + P
Sbjct: 409 DKSDLLYRKMQEDGLLP 425



 Score =  231 bits (588), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 130/352 (36%), Positives = 197/352 (55%), Gaps = 3/352 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT +++I+G C+   V  A  L  +M+     PDVV YN++I G C     N+A  
Sbjct: 77  EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 136

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M   GV+   VT+N ++  LC +G+  +A+RL+  MV RD+ PN  T++ ++D F 
Sbjct: 137 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV 196

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK + A +L+  M       D  +YN LING C +  V+EA  +   MV+KG  P VV
Sbjct: 197 KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVV 256

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  +  +V+   KLF EM +  +  DT TYNT I G  + G    A E+F   
Sbjct: 257 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR- 315

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +    +I+ Y+ L+ GLC + R+E AL LF ++ +  +  D+ TYNI+IHG+C  G +
Sbjct: 316 --MDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 373

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           + A DLF  +    + P+V+ + T+I GF R  +  K   L  KM+E  ++P
Sbjct: 374 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 194/360 (53%), Gaps = 3/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V ++ ++  + K    D   +LF  M+   I  D+ +YN +I+ LC  + +  A  +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +MM  G +P VVT + +++  C+  ++ +A  L+  M +   RP+   Y+T++DG C 
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +N A ELF  ME  G + D V+YN L+ G C +    +A  L R+MV + I P V+T
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  +     +  +   A+KL+EEM R  V  D  TYN+ I+GLC +G + EA ++   + 
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D+  YN LI+G CKS R++   +LFR + +R LV D +TYN +I G    G+ D
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A ++F  M+     PN+  +  L++G     +  K + L   M++ ++  D +  ++V+
Sbjct: 308 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 364



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 126/254 (49%)

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           M+Q    P+   +S ++     +   +    LF  ME  G  HD  SYNI+IN  C+   
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
              ALS+  +M+  G +P VVT ++L  G  + ++V  A+ L  +M+      D   YNT
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            IDG CK G + +AVELF  +       D   YN L+ GLC SGR   A  L R +  R 
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           +V +V+T+  +I     +G+  +A  L+ +M    V P+V  + +LI+G     +  +  
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 352 ELLHKMKEKKVMPD 365
           ++L  M  K  +PD
Sbjct: 241 QMLDLMVTKGCLPD 254



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 104/178 (58%), Gaps = 3/178 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYNT+I+G CK   VD+   LF +M    +  D +TYN++I G   A   + A+
Sbjct: 251 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 310

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M     +P++ T+++++  LC N ++++A  L + M + ++  +  TY+ ++ G 
Sbjct: 311 EIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 367

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           C  G +  A +LF S+   G K D VSY  +I+G+C+ ++ +++  LYR+M   G+ P
Sbjct: 368 CKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 91/195 (46%)

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M+     P++V ++ +   + +    +  + LF  M+   +  D  +YN  I+ LC+   
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
            V A+ +   +     E D+   + LI+G C+  R+  A++L   +       DVV YN 
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +I G C  G ++ A +LF  ME + V  + + + +L+ G     + S    L+  M  + 
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 362 VMPDASIVSMVVDLL 376
           ++P+    + V+D+ 
Sbjct: 181 IVPNVITFTAVIDVF 195


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  261 bits (668), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 138/369 (37%), Positives = 220/369 (59%), Gaps = 10/369 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V+Y+T+I  LCK G V+ A   F QM  E ++P+++++ SLIHGLC   +W + + 
Sbjct: 410 RPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEE 469

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L FEM+++G+ P  +  N IMD LCK G++ EA    D+++   V+PN  +Y+TL+DG+C
Sbjct: 470 LAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYC 529

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK++ + + F  M S+G + D  +YN L+NGY KN  VE+AL+LYREM  K +K   +
Sbjct: 530 FVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAI 589

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T N +  GLF+  ++  A +L+ +M          TYNT + GLC+N  + EA+ +F  L
Sbjct: 590 TSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDL 649

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + ELD+  +N +I+ L K GR++ A  LF ++  R  V  V+TY++MI     +G +
Sbjct: 650 RSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLL 709

Query: 313 DKAHDLFLDMEENAVAP-----NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           +++ DLFL ME+N  A      NVII   L  G VR     +    L K+ EK    +AS
Sbjct: 710 EESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVR-----RAGTYLTKIDEKNFSVEAS 764

Query: 368 IVSMVVDLL 376
             ++++ ++
Sbjct: 765 TAALLIPIV 773



 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 122/358 (34%), Positives = 189/358 (52%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C PN V+Y+TIIDG  KEG VDKA  LF +M G+   PDVVTY+SLI GLC A   N
Sbjct: 196 GYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMN 255

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A+ +   M D+GV P+  T+N+++   C  G+++EA RLL  M    ++P+  TY  L+
Sbjct: 256 KAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLI 315

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
             +C  G+   A  +F SM   G K +   Y+IL++GY     + +   L   M+  GI 
Sbjct: 316 QYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIP 375

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
                +N L     +   V+ A+  F EM+++ +  D  +Y+T I  LCK G + +AV  
Sbjct: 376 FEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYH 435

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +       +I ++  LI GLC  G  +   EL   +  R +  D +  N ++  LC 
Sbjct: 436 FNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCK 495

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +G++ +A D F  +    V PNV+ + TLI G+  + K  + I+   +M    + PD+
Sbjct: 496 EGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDS 553



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 190/366 (51%), Gaps = 4/366 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKA-KALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           +   VT N +I GLC     D A   +F +M      PDV +YN+LI GLC      EA 
Sbjct: 126 RVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEAL 185

Query: 72  RLFFEMMDQG---VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            L   M   G     P+VV+++ I+D   K G++D+A  L D M+ +   P+  TYS+L+
Sbjct: 186 ELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLI 245

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C    +N+AE +   M   G   +  +YNI+I GYC   ++EEA+ L ++M   G++
Sbjct: 246 DGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQ 305

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTY  L     +I +   A  +F+ M R     +++ Y+  + G    G +++  +L
Sbjct: 306 PDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDL 365

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +       + +A+N LI    K G ++ A+  F  + +  L  DVV+Y+ +IH LC 
Sbjct: 366 LDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCK 425

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G+++ A   F  M    ++PN+I F +LIHG   I +  KV EL  +M  + + PDA  
Sbjct: 426 IGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIF 485

Query: 369 VSMVVD 374
           ++ ++D
Sbjct: 486 MNTIMD 491



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 187/355 (52%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           IG    P+ VTY+++IDGLCK   ++KA+A+   M  + + P+  TYN +I G C     
Sbjct: 230 IGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQL 289

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA RL  +M   G+QP VVT+ +++   CK G+  EA  + D MV++  +PN+  Y  L
Sbjct: 290 EEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHIL 349

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G+   G +    +L   M   G   +  ++NILI  Y K+  V++A++ + EM   G+
Sbjct: 350 LHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGL 409

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P VV+Y+T+   L +I +VE A+  F +M  + ++ +  ++ + I GLC  G   +  E
Sbjct: 410 RPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEE 469

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +       D    N ++D LCK GR+  A + F  +    +  +VV+YN +I G C
Sbjct: 470 LAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYC 529

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
             G+MD++   F  M    + P+   +  L++G+ +  +    + L  +M  K V
Sbjct: 530 FVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDV 584



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 145/303 (47%), Gaps = 10/303 (3%)

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR----DVRPNAFTYSTLMDGFCLTGK 136
           G +   VT N ++  LC   + D+A   +D++ +R       P+ F+Y+ L+ G C+  K
Sbjct: 124 GWRVQNVTLNQLIKGLCDGKRTDDA---MDMVFRRMPELGYTPDVFSYNALIKGLCVEKK 180

Query: 137 INRAEELFGSMESMG---CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              A EL   M + G   C  + VSY+ +I+G+ K  EV++A  L+ EM+ +G  P VVT
Sbjct: 181 SQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVT 240

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y++L  GL +   +  A  + + M    V  +T TYN  I G C  G + EAV L + + 
Sbjct: 241 YSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMS 300

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+  Y  LI   CK GR   A  +F S+ R+    +   Y+I++HG    G + 
Sbjct: 301 GSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALI 360

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
              DL   M  + +      F  LI  + +     K +    +M++  + PD    S V+
Sbjct: 361 DVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVI 420

Query: 374 DLL 376
            +L
Sbjct: 421 HIL 423



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 154/319 (48%), Gaps = 14/319 (4%)

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDE-------ASRLLDLMVQRDVR--- 118
           +A  LF E++ Q    SV  FN ++  + +             A  L + M +  V    
Sbjct: 32  DALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMMA 91

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
            N +    L+  FC  G+++ A   F     MG +  +V+ N LI G C  K  ++A+ +
Sbjct: 92  ANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDM 151

Query: 179 -YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD---DVAADTSTYNTFID 234
            +R M   G  P V +YN L  GL    + + AL+L   M  D   + + +  +Y+T ID
Sbjct: 152 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIID 211

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
           G  K G + +A  LF  +       D+  Y+ LIDGLCK+  +  A  + + +  + ++ 
Sbjct: 212 GFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMP 271

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           +  TYNIMI G C+ GQ+++A  L   M  + + P+V+ ++ LI  + +I + ++   + 
Sbjct: 272 NTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVF 331

Query: 355 HKMKEKKVMPDASIVSMVV 373
             M  K   P+++I  +++
Sbjct: 332 DSMVRKGQKPNSTIYHILL 350



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 125/238 (52%), Gaps = 2/238 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           IGV  KPN V+YNT+IDG C  G +D++   F +M    + PD  TYN+L++G       
Sbjct: 512 IGV--KPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRV 569

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            +A  L+ EM  + V+   +T N+I+  L + G++  A  L   MV R  +    TY+T+
Sbjct: 570 EDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTV 629

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G C    ++ A  +F  + S   + D  ++NI+IN   K   ++EA SL+  MV +G 
Sbjct: 630 LGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGP 689

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            P V+TY+ +     E   +E +  LF  M+++  AAD+   N  I  L + G +  A
Sbjct: 690 VPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRA 747



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 118/234 (50%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + +  +P++ TYN +++G  K G V+ A AL+ +M  +++    +T N ++HGL  A   
Sbjct: 545 VSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRI 604

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A+ L+ +M+D+G Q  + T+N ++  LC+N  +DEA R+ + +  ++   + +T++ +
Sbjct: 605 VAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIV 664

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++     G+I+ A+ LF +M   G     ++Y+++I    +   +EE+  L+  M   G 
Sbjct: 665 INALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGC 724

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
                  N +   L E   V  A     ++   + + + ST    I  + +  Y
Sbjct: 725 AADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLIPIVSEKKY 778


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  261 bits (667), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 134/363 (36%), Positives = 210/363 (57%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY  +I  LCK G V+ A   F QM  E ++P  + YNSLIHGLC  N W  A+ L
Sbjct: 374 PDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 433

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+D+G+  + + FN I+D  CK G++ E+ +L DLMV+  V+P+  TYSTL+DG+CL
Sbjct: 434 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCL 493

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A +L   M S+G K + V+Y  LINGYCK   + +AL L++EM S G+ P ++T
Sbjct: 494 AGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIIT 553

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GLF+  +   A +L+  +       + STYN  + GLCKN    +A+ +F+ L 
Sbjct: 554 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLC 613

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           ++  +L+ + +N +ID L K GR   A +LF +     LV +  TY +M   +   G ++
Sbjct: 614 LMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 673

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +   LFL ME+N    +  +   ++   ++  + ++    L  + EK    +AS  S+ +
Sbjct: 674 ELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI 733

Query: 374 DLL 376
           DLL
Sbjct: 734 DLL 736



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 196/360 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   YN +I    K+G VD+A  +F +M+ + +NPD VTY ++I  LC +    +A   
Sbjct: 339 PDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLY 398

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+D+G+ P  + +N ++  LC   K + A  L+  M+ R +  N   +++++D  C 
Sbjct: 399 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 458

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  +E+LF  M  +G K D ++Y+ LI+GYC   +++EA+ L   MVS G+KP  VT
Sbjct: 459 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 518

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G  +I ++  AL LF+EM+   V+ D  TYN  + GL +      A EL+  + 
Sbjct: 519 YRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 578

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               ++++  YN ++ GLCK+   + AL +F++L    L  +  T+NIMI  L   G+  
Sbjct: 579 ESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNG 638

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A DLF+    N + PN   +  +    +      ++ +L   M++     D+ +++ +V
Sbjct: 639 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 698



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 203/413 (49%), Gaps = 43/413 (10%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           MA+G G       P+ V+Y T+I+G  KEG   KA + + +M    I+PDVVTY+S+I  
Sbjct: 184 MADGRGGGSA---PDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAA 240

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA--------------- 105
           LC     ++A  +   M+  GV P+  T+  IM   C +G+  EA               
Sbjct: 241 LCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPD 300

Query: 106 -------------------------SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
                                      LLDLMV+  + P+ + Y+ L+  +   GK++ A
Sbjct: 301 GLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEA 360

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
             +F  M   G   D V+Y  +I   CK+  VE+A+  + +M+ +G+ P  + YN+L  G
Sbjct: 361 MLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 420

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
           L   ++ E A +L  EM    +  +T  +N+ ID  CK G ++E+ +LF  +  +  + D
Sbjct: 421 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 480

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           I  Y+ LIDG C +G+++ A++L   +    L  + VTY  +I+G C   +M  A  LF 
Sbjct: 481 IITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFK 540

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +ME + V+P++I +  ++ G  +  + +   EL  ++ E     + S  ++++
Sbjct: 541 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 593



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 189/397 (47%), Gaps = 43/397 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM---KGENINPDVVTYNSLIHGLCHANDWN 68
           C P+  +   ++ GLC E    +A  L   M   +G    PDVV+Y ++I+G     D  
Sbjct: 154 CMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSG 213

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A   + EM+D+ + P VVT++ I+  LCK   MD+A  +L  MV+  V PN  TY+++M
Sbjct: 214 KAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIM 273

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVS------------------------------ 158
            G+C +G+   A      + S G + D +                               
Sbjct: 274 HGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMV 333

Query: 159 ----------YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 208
                     YNILI  Y K  +V+EA+ ++ +M  +G+ P  VTY  +   L +  +VE
Sbjct: 334 RNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVE 393

Query: 209 HALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLI 268
            A+  FE+M  + ++     YN+ I GLC       A EL   +      L+   +N +I
Sbjct: 394 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 453

Query: 269 DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVA 328
           D  CK GR+  + +LF  + R  +  D++TY+ +I G C  G+MD+A  L   M    + 
Sbjct: 454 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLK 513

Query: 329 PNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           PN + + TLI+G+ +I++    + L  +M+   V PD
Sbjct: 514 PNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPD 550



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 175/353 (49%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TY T++ G   +G +    AL   M    I+PD   YN LI         +EA  
Sbjct: 303 EPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAML 362

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +M  QG+ P  VT+  ++  LCK+G++++A    + M+   + P    Y++L+ G C
Sbjct: 363 VFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLC 422

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K  RAEEL   M   G   + + +N +I+ +CK   V E+  L+  MV  G+KP ++
Sbjct: 423 TCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 482

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+TL  G     +++ A+KL   M    +  +T TY T I+G CK   + +A+ LF+ +
Sbjct: 483 TYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEM 542

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  DI  YN ++ GL ++ R   A EL+  +       ++ TYNI++HGLC +   
Sbjct: 543 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLT 602

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           D A  +F ++    +      F  +I   +++ +  +  +L        ++P+
Sbjct: 603 DDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPN 655



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 168/372 (45%), Gaps = 13/372 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TY  +I   C+   +D   A    +  +    + +T+  L+ GLC     ++A  +
Sbjct: 85  PTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR-----PNAFTYSTL 127
               M +    P V +  +++  LC   +  EA  L  +M   D R     P+  +Y+T+
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMA--DGRGGGSAPDVVSYTTV 202

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++GF   G   +A   +  M       D V+Y+ +I   CK + +++A+ +   MV  G+
Sbjct: 203 INGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGV 262

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV-----AADTSTYNTFIDGLCKNGYI 242
            P   TY ++  G     Q + A+   ++++ D V       D +TY T + G    G +
Sbjct: 263 MPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGAL 322

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
           V    L   +       D   YN LI    K G+++ A+ +F  + ++ L  D VTY  +
Sbjct: 323 VGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAV 382

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I  LC  G+++ A   F  M +  ++P  I++ +LIHG    NK  +  EL+ +M ++ +
Sbjct: 383 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 442

Query: 363 MPDASIVSMVVD 374
             +    + ++D
Sbjct: 443 CLNTIFFNSIID 454



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 113/237 (47%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           +G + V  KPNTVTY T+I+G CK   +  A  LF +M+   ++PD++TYN ++ GL   
Sbjct: 505 SGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQT 564

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
                AK L+  + + G Q  + T+N+I+  LCKN   D+A R+   +   D++  A T+
Sbjct: 565 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTF 624

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + ++D     G+   A++LF +  S G   +  +Y ++         +EE   L+  M  
Sbjct: 625 NIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 684

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
            G        N +   L +  ++  A      +     + + ST + FID L    Y
Sbjct: 685 NGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 741



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 6/284 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            IGV  KP+ +TY+T+IDG C  G +D+A  L   M    + P+ VTY +LI+G C  + 
Sbjct: 474 RIGV--KPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISR 531

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A  LF EM   GV P ++T+N+I+  L +  +   A  L   + +   +    TY+ 
Sbjct: 532 MGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 591

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ G C     + A  +F ++  M  K +  ++NI+I+   K     EA  L+    S G
Sbjct: 592 ILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNG 651

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P   TY  +   +     +E   +LF  M+ +    D+   N  +  L + G I  A 
Sbjct: 652 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAG 711

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
                +      L+    +  ID L   G+ +   E  R LP +
Sbjct: 712 TYLSMIDEKHFSLEASTASLFID-LLSGGKYQ---EYHRFLPEK 751



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 7/198 (3%)

Query: 175 ALSLYREMVSKG---IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           A+S Y  M   G   + PTV TY  L        +++        + +     +  T+  
Sbjct: 68  AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTP 127

Query: 232 FIDGLCKNGYIVEAVEL-FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
            + GLC +    +A+++  R +  L C  D+ +   L+ GLC   R + ALEL   +   
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADG 187

Query: 291 V---LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
                  DVV+Y  +I+G   +G   KA+  + +M +  ++P+V+ + ++I    +    
Sbjct: 188 RGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAM 247

Query: 348 SKVIELLHKMKEKKVMPD 365
            K +E+L  M +  VMP+
Sbjct: 248 DKAMEVLTSMVKNGVMPN 265



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 14/214 (6%)

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           E+A  ++ E++ +G   ++   N     +   H    A+  +  M R      T T +T+
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTY 90

Query: 233 --IDGLCKNGYIVEAVEL-FRTLG-ILKCELDIQA--YNCLIDGLCKSGRLEIALEL-FR 285
             + G C      + ++L F  LG ++K    ++A  +  L+ GLC   R   A+++  R
Sbjct: 91  AILIGCCCR---ADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLR 147

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL---FLDMEENAVAPNVIIFVTLIHGFV 342
            +     + DV +  I++ GLC++ +  +A +L     D      AP+V+ + T+I+GF 
Sbjct: 148 RMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFF 207

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +     K     H+M ++++ PD    S ++  L
Sbjct: 208 KEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAAL 241


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  261 bits (667), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 141/363 (38%), Positives = 210/363 (57%), Gaps = 12/363 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PN V Y  +ID LCK G VD A   F QM  E            ++GLC    W +A+ 
Sbjct: 462 SPNVVNYGALIDALCKLGRVDDAILKFNQMINE------------VYGLCTVEKWEKAEE 509

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L FEM+DQG++  VV FN +M +LC+ G++ EA RL++LM++  VRP+  +Y+TL+DG C
Sbjct: 510 LVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHC 569

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           LTG+ + A +L   M S+G K ++ +YN L++GYCK + +++A SL REM+  G  P VV
Sbjct: 570 LTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVV 629

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNT+  GLF+  +   A +L+  M       D  TYN  ++GLCKN  + EA ++F++L
Sbjct: 630 TYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSL 689

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +L I  +N +I  L K G+ E A++LF ++    LV DV TY ++   L  +G +
Sbjct: 690 CSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSL 749

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++   LF  MEEN  APN  +   L+  F+     S+    L K+ EK    +AS  SM+
Sbjct: 750 EELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASML 809

Query: 373 VDL 375
           + L
Sbjct: 810 ISL 812



 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 197/391 (50%), Gaps = 37/391 (9%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G+ C P+ V+YNT+I+G  +EG VDKA  LFLQM    I PDVVTYN++I GLC A   +
Sbjct: 297 GLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVD 356

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            AK +F +M+D+GV+PS  T+N ++      GK  E  RLL+ M   D+ P+ F Y+ L+
Sbjct: 357 RAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLL 416

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           D  C  G+   A  +F S+   G K D +              ++EA+ ++ +M  +G+ 
Sbjct: 417 DYLCKNGRCTEARNIFDSVIRKGIKPDAM--------------IDEAVCIFDKMRQQGLS 462

Query: 189 PTVVTYNTLF-----------------------LGLFEIHQVEHALKLFEEMQRDDVAAD 225
           P VV Y  L                         GL  + + E A +L  EM    +  D
Sbjct: 463 PNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLD 522

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
              +NT +  LC+ G ++EA  L   +  +    D+ +YN L+DG C +GR + A +L  
Sbjct: 523 VVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLD 582

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            +    L  +  TYN ++HG C   ++D A+ L  +M  N   P+V+ + T++HG  +  
Sbjct: 583 VMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTG 642

Query: 346 KPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + S+  EL   M   +   D    +++++ L
Sbjct: 643 RFSEAKELYLNMINSRTQWDMYTYNIILNGL 673



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 189/389 (48%), Gaps = 43/389 (11%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR- 72
           P+  TY+ +I   C+ G ++   A+F  +       + + +N L+ GLC A   +EA   
Sbjct: 193 PDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNI 252

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR---DVRPNAFTYSTLMD 129
           L + M + G  P+VV++N ++   C   + +EA  LL +M         P+  +Y+T+++
Sbjct: 253 LLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVIN 312

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GF   G++++A  LF  M   G   D V+YN +I+G CK + V+ A +++++M+ KG+KP
Sbjct: 313 GFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKP 372

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           +  TYN L  G     + +  ++L EEM   D+  D   Y   +D LCKNG   EA  +F
Sbjct: 373 SNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIF 432

Query: 250 RTL---GILK--------CELD----------IQAYNCLIDGLCKSGRLEIALELFRSLP 288
            ++   GI          C  D          +  Y  LID LCK GR++ A        
Sbjct: 433 DSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDA-------- 484

Query: 289 RRVLVADVVTYNIMI---HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
                  ++ +N MI   +GLC   + +KA +L  +M +  +  +V++F TL+    R  
Sbjct: 485 -------ILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREG 537

Query: 346 KPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +  +   L+  M    V PD    + +VD
Sbjct: 538 RVMEAQRLIELMLRVGVRPDVISYNTLVD 566



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 139/284 (48%), Gaps = 6/284 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            +GV  +P+ ++YNT++DG C  G  D+A  L   M    + P+  TYN+L+HG C A  
Sbjct: 551 RVGV--RPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARR 608

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            ++A  L  EM+  G  P VVT+N I+  L + G+  EA  L   M+    + + +TY+ 
Sbjct: 609 IDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNI 668

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           +++G C    ++ A ++F S+ S G +   +++NI+I    K  + E+A+ L+  + + G
Sbjct: 669 ILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYG 728

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P V TY  +   L +   +E    LF  M+ +  A ++   N  +      G I  A 
Sbjct: 729 LVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAG 788

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
                L      L+    + LI  L   G  +   +L +SLP +
Sbjct: 789 AYLSKLDEKNFSLEASTASMLIS-LYSRGEYQ---QLAKSLPEK 828



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 145/322 (45%), Gaps = 48/322 (14%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCK-NGKMDEASR-----LLDLMVQR---DVR 118
           ++A +LF  ++      SV  FN ++  + + +G+           L D MV+     V 
Sbjct: 133 HDALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVA 192

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS- 177
           P+  TYS L+  FC  G++     +FG +   G + + + +N L+ G C  K ++EA + 
Sbjct: 193 PDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNI 252

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           L   M   G  P VV+YN                                   T + G C
Sbjct: 253 LLWRMPEFGCTPNVVSYN-----------------------------------TLVKGFC 277

Query: 238 KNGYIVEAVELFRTLGI---LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
                 EA+EL   +     L C  D+ +YN +I+G  + G+++ A  LF  +  R +  
Sbjct: 278 NENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPP 337

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           DVVTYN +I GLC    +D+A  +F  M +  V P+   +  LIHG++   K  +V+ LL
Sbjct: 338 DVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLL 397

Query: 355 HKMKEKKVMPDASIVSMVVDLL 376
            +M    + PD  I ++++D L
Sbjct: 398 EEMSTHDLEPDCFIYALLLDYL 419


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  261 bits (666), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 135/364 (37%), Positives = 206/364 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V Y+TI+DGLCK+G V +A  L  +M G+ + P++VTY  LI GLC+   W E   
Sbjct: 214 KPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGS 273

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+  G++  + T N+++D  CK GK+ +A  ++  M+     P+ FTY++L+  +C
Sbjct: 274 LLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYC 333

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L  K+N A  +F  M S GC  D V +  LI+G+CK+K + + + L  EM   G  P VV
Sbjct: 334 LQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVV 393

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+ TL  G  +  +   A +LF  M +     +  T    +DGLCK   + EAV L   +
Sbjct: 394 TWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAM 453

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +L+I  Y+ L+DG+C +G+L  A ELF SLP + L  +V TY IMI GLC  G +
Sbjct: 454 EKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSL 513

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           DKA DL ++MEEN   P+   +   + G +   + ++ I+ L  M++K    DA+   + 
Sbjct: 514 DKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEIT 573

Query: 373 VDLL 376
           ++ L
Sbjct: 574 INYL 577



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 162/344 (47%), Gaps = 4/344 (1%)

Query: 26  LCKEGFV---DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQ-G 81
           LCK G V   D+A  LF  M      P V  +  L+  +     +  A  L   +    G
Sbjct: 48  LCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLG 107

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
           ++   +T N++++ LC+   +     +L  M +  + P   T + L++G C+ G + +A 
Sbjct: 108 IEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAV 167

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
            L   ME M    D  +Y +LING CK  +   A+   R+M  +  KP VV Y+T+  GL
Sbjct: 168 GLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGL 227

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
            +   V  AL L  EM    V  +  TY   I GLC  G   E   L   +  +   LD+
Sbjct: 228 CKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDL 287

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
           Q  N L+D  CK G++  A  +   +       DV TYN +IH  C   +M++A  +F  
Sbjct: 288 QTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHL 347

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           M      P++++F +LIHG+ +    +KV+ LL +M +   +PD
Sbjct: 348 MVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPD 391



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 168/362 (46%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + +T+T N +I+ LC+   V    ++   M    + P V+T  +LI+GLC   +  +A  
Sbjct: 109 EADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVG 168

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M        V T+ V+++ LCK G    A   L  M +R+ +PN   YST+MDG C
Sbjct: 169 LVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLC 228

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A  L   M   G + + V+Y  LI G C     +E  SL  EM+  G++  + 
Sbjct: 229 KDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQ 288

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T N L     +  +V  A  +   M       D  TYN+ I   C    + EA+ +F  +
Sbjct: 289 TLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLM 348

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  DI  +  LI G CK   +   + L   + +   V DVVT+  +I G C  G+ 
Sbjct: 349 VSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRP 408

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A +LFL+M +    PN+     ++ G  + N  S+ + L   M++  +  +  I S++
Sbjct: 409 LAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSIL 468

Query: 373 VD 374
           +D
Sbjct: 469 LD 470



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 150/305 (49%), Gaps = 4/305 (1%)

Query: 18  TYNTIIDGLCKEGFVDKAKAL--FLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFF 75
           T N ++D  CKEG V +AK++  F+ + GE   PDV TYNSLIH  C  N  NEA R+F 
Sbjct: 289 TLNILVDAFCKEGKVMQAKSVIGFMILTGEG--PDVFTYNSLIHIYCLQNKMNEAMRVFH 346

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
            M+ +G  P +V F  ++   CK+  +++   LL+ M +    P+  T++TL+ GFC  G
Sbjct: 347 LMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAG 406

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           +   A+ELF +M   G   +  +  ++++G CK   + EA+SL   M    +   +V Y+
Sbjct: 407 RPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYS 466

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
            L  G+    ++  A +LF  +    +  +  TY   I GLCK G + +A +L   +   
Sbjct: 467 ILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEEN 526

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
            C  D   YN  + GL     +  +++    +  +    D  T  I I+ L  +    + 
Sbjct: 527 GCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITINYLSTNEGDTRI 586

Query: 316 HDLFL 320
            + F 
Sbjct: 587 REFFF 591



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 113/228 (49%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V + ++I G CK+  ++K   L  +M      PDVVT+ +LI G C A     AK
Sbjct: 353 CLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAK 412

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M   G  P++ T  VI+D LCK   + EA  L + M + ++  N   YS L+DG 
Sbjct: 413 ELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGM 472

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+N A ELF S+   G + +  +Y I+I G CK   +++A  L   M   G  P  
Sbjct: 473 CSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDN 532

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            TYN    GL    ++  ++K    M+    + D +T    I+ L  N
Sbjct: 533 CTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITINYLSTN 580



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 131/293 (44%), Gaps = 45/293 (15%)

Query: 89  FNVIMDELCKNGK---MDEASRLLDLMVQRDVRPNAFTYSTLMDGFC----LTGKINRAE 141
           F + M  LCK+GK   +DEA  L   M      P+   ++ L+         T  I+  +
Sbjct: 41  FLISMRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVK 100

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
            +F    S+G + D ++ NI+IN  C+ K V    S+   M   G++PTV+T   L    
Sbjct: 101 HIF---SSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTAL---- 153

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
                                          I+GLC  G + +AV L   +  ++  LD+
Sbjct: 154 -------------------------------INGLCVQGNVAQAVGLVDHMEKMRYPLDV 182

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
             Y  LI+GLCK+G    A+E  R +  R    +VV Y+ ++ GLC DG + +A +L  +
Sbjct: 183 YTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSE 242

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           M    V PN++ +  LI G     +  +   LL +M +  +  D   ++++VD
Sbjct: 243 MSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVD 295



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 60/130 (46%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V Y+ ++DG+C  G ++ A  LF  + G+ +  +V TY  +I GLC     ++A+ L 
Sbjct: 461 NIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLL 520

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M + G  P   T+NV +  L    ++  + + L +M  +    +A T    ++     
Sbjct: 521 INMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITINYLSTN 580

Query: 135 GKINRAEELF 144
               R  E F
Sbjct: 581 EGDTRIREFF 590


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  260 bits (665), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 124/363 (34%), Positives = 210/363 (57%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYNT++ GLC+ G +D+A  L  +M+   + PD  +Y++L+ GLC     + A 
Sbjct: 227 CMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMAL 286

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++F +  +    P VV ++ ++  LCK G++DEA +L + M +    P+  T++ LMDG 
Sbjct: 287 KVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGL 346

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++  A+++  +ME   C  + ++Y+ LI+G CK  +V +A  +++ M+ +GI+P V
Sbjct: 347 CKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNV 406

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN+L  G    + V+ AL L EEM       D  TYNT IDGLCK G   EA  LF  
Sbjct: 407 VTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGD 466

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  D+  Y+CLI G CK  R+++A  LF  + ++ ++ DVVT++ ++ G CN G 
Sbjct: 467 MKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGL 526

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D A  L  +M  +  +P+V  + +L+ GF ++ +  +   +L +M ++   P+    + 
Sbjct: 527 VDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTA 586

Query: 372 VVD 374
           ++D
Sbjct: 587 LID 589



 Score =  258 bits (659), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 132/361 (36%), Positives = 210/361 (58%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN +I+G CK   V +A  L  +MK   + P+VVTY+++IHG C     + A +L
Sbjct: 159 PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKL 218

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M++ G  P++VT+N ++  LC+NG MDEA  LLD M +R ++P+ F+Y TLM G C 
Sbjct: 219 FRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK 278

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TGKI+ A ++F    +  C  D V+Y+ LI G CK   ++EA  L+ +M     +P VVT
Sbjct: 279 TGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVT 338

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  GL +  +++ A ++ E M+  +   +  TY++ IDGLCK G + +A E+F+ + 
Sbjct: 339 FTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI 398

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   E ++  YN LI G C +  ++ AL L   +     + D++TYN +I GLC  G+  
Sbjct: 399 VRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAP 458

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A+ LF DM+     P+VI +  LI GF ++ +      L   M ++ V+PD    S +V
Sbjct: 459 EANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 518

Query: 374 D 374
           +
Sbjct: 519 E 519



 Score =  244 bits (623), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 124/357 (34%), Positives = 202/357 (56%), Gaps = 7/357 (1%)

Query: 3   NGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC 62
           N NG+    C P+ V Y+T+I GLCK G +D+A  LF +M+  +  PDVVT+ +L+ GLC
Sbjct: 292 NSNGD----CPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLC 347

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
             +   EA+++   M D+   P+V+T++ ++D LCK G++ +A  +   M+ R + PN  
Sbjct: 348 KGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVV 407

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TY++L+ GFC+T  ++ A  L   M + GC  D ++YN LI+G CK     EA  L+ +M
Sbjct: 408 TYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDM 467

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
            +K   P V+TY+ L  G  ++ +++ A  LF++M +  V  D  T++T ++G C  G +
Sbjct: 468 KAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLV 527

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            +A  L   +    C  D+  Y  L+DG CK GR+  A  + + + +R    +VVTY  +
Sbjct: 528 DDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTAL 587

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV---RINKPSKVIELLHK 356
           I   C  G+   A+ L  +M  N V PNVI + +LI GF     + +  K++E L +
Sbjct: 588 IDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLER 644



 Score =  244 bits (622), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 136/395 (34%), Positives = 204/395 (51%), Gaps = 32/395 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIH-------------- 59
           PN  TY  +I GLCK G +DKA  L  +M+     PD   YN +IH              
Sbjct: 57  PNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDY 116

Query: 60  ------------------GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
                             GLC AN   EA   F +M  +G  P+  T+NV+++  CK  K
Sbjct: 117 FRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHK 176

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +  A  LL  M +  + PN  TYST++ GFC   K++ A +LF  M   GC  + V+YN 
Sbjct: 177 VHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNT 236

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L++G C+N  ++EA  L  EM  +G++P   +Y+TL  GL +  +++ ALK+FE+    D
Sbjct: 237 LLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD 296

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              D   Y+T I GLCK G + EA +LF  +    CE D+  +  L+DGLCK  RL+ A 
Sbjct: 297 CPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQ 356

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           ++  ++  R    +V+TY+ +I GLC  GQ+  A ++F  M    + PNV+ + +LIHGF
Sbjct: 357 QVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 416

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              N     + L+ +M     +PD    + ++D L
Sbjct: 417 CMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGL 451



 Score =  238 bits (606), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 124/362 (34%), Positives = 197/362 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N +T+  +IDGLCK   + +A   F +MK +   P+  TYN LI+G C  +  + A 
Sbjct: 122 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 181

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM + G+ P+VVT++ ++   C+  K+D A +L   MV+    PN  TY+TL+ G 
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 241

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G ++ A EL   M   G + D  SY+ L+ G CK  +++ AL ++ +  +    P V
Sbjct: 242 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 301

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V Y+TL  GL +  +++ A KLFE+M+ +    D  T+   +DGLCK   + EA ++  T
Sbjct: 302 VAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 361

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  ++  Y+ LIDGLCK+G++  A E+F+ +  R +  +VVTYN +IHG C    
Sbjct: 362 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 421

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D A  L  +M      P++I + TLI G  +  +  +   L   MK K   PD    S 
Sbjct: 422 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 481

Query: 372 VV 373
           ++
Sbjct: 482 LI 483



 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 128/357 (35%), Positives = 198/357 (55%), Gaps = 8/357 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  +Y+T++ GLCK G +D A  +F      +  PDVV Y++LI GLC A   +EA +
Sbjct: 263 QPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACK 322

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF +M +   +P VVTF  +MD LCK  ++ EA ++L+ M  R+  PN  TYS+L+DG C
Sbjct: 323 LFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLC 382

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            TG++  A+E+F  M   G + + V+YN LI+G+C    V+ AL L  EM + G  P ++
Sbjct: 383 KTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDII 442

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GL +  +   A +LF +M+      D  TY+  I G CK    +E +++ RTL
Sbjct: 443 TYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCK----LERIDMARTL 498

Query: 253 --GILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +LK  +  D+  ++ L++G C +G ++ A  L   +       DV TY  ++ G C 
Sbjct: 499 FDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCK 558

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            G+M +A  +   M +    PNV+ +  LI  F R  KP+    LL +M    V P+
Sbjct: 559 VGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPN 615



 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 201/359 (55%), Gaps = 3/359 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ VT+  ++DGLCK   + +A+ +   M+  N  P+V+TY+SLI GLC      +A+
Sbjct: 332 CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQ 391

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M+ +G++P+VVT+N ++   C    +D A  L++ M      P+  TY+TL+DG 
Sbjct: 392 EVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGL 451

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C TG+   A  LFG M++  C  D ++Y+ LI G+CK + ++ A +L+ +M+ + + P V
Sbjct: 452 CKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDV 511

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT++TL  G      V+ A +L EEM   D + D  TY + +DG CK G +VEA  + + 
Sbjct: 512 VTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKR 571

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ ++  Y  LID  C++G+  +A  L   +    +  +V+TY  +I G C  G 
Sbjct: 572 MAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGD 631

Query: 312 MDKAHDLF--LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           +++A  +   L+ +EN  A ++  +  ++ G  R  + S  +ELL  +K+    P   I
Sbjct: 632 LEEARKILERLERDENCKA-DMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDI 689



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 191/362 (52%), Gaps = 3/362 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  TYN + + L +   +D+   +        I P+V TY  +I GLC + D ++A  L 
Sbjct: 23  NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM + G  P    +N ++  LC   K    ++ LD     +   N  T++ ++DG C  
Sbjct: 83  EEMRESGPVPDAAIYNFVIHALC---KARNTAKALDYFRSMECEKNVITWTIMIDGLCKA 139

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            ++  A   F  M+  G   ++ +YN+LING+CK  +V  A  L +EM   G+ P VVTY
Sbjct: 140 NRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTY 199

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           +T+  G     +V+ A KLF +M  +    +  TYNT + GLC+NG + EA EL   +  
Sbjct: 200 STVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRE 259

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + D  +Y+ L+ GLCK+G++++AL++F          DVV Y+ +I GLC  G++D+
Sbjct: 260 RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDE 319

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  LF  M EN+  P+V+ F  L+ G  + ++  +  ++L  M+++   P+    S ++D
Sbjct: 320 ACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLID 379

Query: 375 LL 376
            L
Sbjct: 380 GL 381



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 166/345 (48%), Gaps = 33/345 (9%)

Query: 65  NDWNEAKRLF-FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
           +D + A R F +    QG   +V T+N + + L +  ++DE   +L       + PN FT
Sbjct: 2   SDPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFT 61

Query: 124 YSTLMDGFCLTGKINRAEELFGSM--------------------------------ESMG 151
           Y+ ++ G C +G +++A EL   M                                 SM 
Sbjct: 62  YAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME 121

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
           C+ + +++ I+I+G CK   + EA + + +M  KG  P   TYN L  G  ++H+V  A 
Sbjct: 122 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 181

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            L +EM+   +A +  TY+T I G C+   +  A +LFR +    C  ++  YN L+ GL
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 241

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C++G ++ A EL   +  R L  D  +Y+ ++ GLC  G++D A  +F D       P+V
Sbjct: 242 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 301

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + + TLI G  +  +  +  +L  KM+E    PD    + ++D L
Sbjct: 302 VAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGL 346



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 115/241 (47%), Gaps = 37/241 (15%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT++T+++G C  G VD A+ L  +M   + +PDV TY SL+ G C      EA+R+
Sbjct: 509 PDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRV 568

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL------ 127
              M  +G QP+VVT+  ++D  C+ GK   A RLL+ MV   V+PN  TY +L      
Sbjct: 569 LKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCG 628

Query: 128 ------------------------------MDGFCLTGKINRAEELFGSMESMGCKHDDV 157
                                         MDG C TG+++ A EL  +++  G      
Sbjct: 629 TGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHD 688

Query: 158 SYNILINGYCKNKEVEEALSLYREM-VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            Y  LI G C+ KE+ +A+ +  EM +S+  +P    Y  +   L    + E A  L +E
Sbjct: 689 IYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADE 748

Query: 217 M 217
           +
Sbjct: 749 L 749


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  260 bits (665), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 137/358 (38%), Positives = 206/358 (57%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           + Y+TI+D LCK+G V +A  LF  M  + I PD+V YNSLIHGLC+   W EA  L   
Sbjct: 213 IAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGN 272

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           MM +G+ P+V TFNV++D  CK+G +  A  ++  MV   V P+  TY++++ G CL  +
Sbjct: 273 MMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQ 332

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +  A ++F  M   G   + V+Y+ LI+G+CK K + +AL L  EMV+ G+ P VVT++T
Sbjct: 333 MGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWST 392

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G  +  + E A +LF  M   D   +  T    +DGL K  +  EA+ LFR +  + 
Sbjct: 393 LIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMN 452

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            EL++  YN ++DG+C  G+L  A ELF  LP + +  DVV Y  MI GLC +G +D A 
Sbjct: 453 LELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAE 512

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +L + MEEN   PN   +   + G ++    S+  + L  MK K +  DA+   +++ 
Sbjct: 513 NLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLIS 570



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 170/331 (51%), Gaps = 1/331 (0%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           I PDV T   +I+ LCH N       +   M   GV P+VVTF  +++ LC  G +  A+
Sbjct: 102 IKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAA 161

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV-SYNILING 165
           R  D +     + N++TY  +++G C  G  + A      ++   C  D V +Y+ +++ 
Sbjct: 162 RFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDS 221

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
            CK+  V EAL+L+  M SKGI+P +V YN+L  GL    + + A  L   M R  +  +
Sbjct: 222 LCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPN 281

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
             T+N  +D  CK+G I  A  +   +  +  E D+  YN +I G C   ++  A+++F 
Sbjct: 282 VQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFE 341

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            +  +  + ++VTY+ +IHG C    ++KA  L  +M  + + P+V+ + TLI GF +  
Sbjct: 342 LMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAG 401

Query: 346 KPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           KP    EL   M E    P+    ++++D L
Sbjct: 402 KPEAAKELFCTMHEHDQHPNLQTCAIILDGL 432



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 168/329 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V YN++I GLC  G   +A  L   M  + I P+V T+N L+   C     + AK 
Sbjct: 244 QPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKT 303

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M+  GV+P VVT+N ++   C   +M +A ++ +LM+ +   PN  TYS+L+ G+C
Sbjct: 304 IMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWC 363

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            T  IN+A  L G M + G   D V+++ LI G+CK  + E A  L+  M      P + 
Sbjct: 364 KTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQ 423

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T   +  GLF+      A+ LF EM++ ++  +   YN  +DG+C  G + +A ELF  L
Sbjct: 424 TCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCL 483

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                ++D+ AY  +I GLCK G L+ A  L   +     + +  TYN+ + GL     +
Sbjct: 484 PSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDI 543

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            ++    L M+   ++ +      LI  F
Sbjct: 544 SRSTKYLLLMKGKGLSADATTTELLISYF 572



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 175/366 (47%), Gaps = 7/366 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  T   II+ LC         ++   M    ++P VVT+ +LI+GLC   +   A R
Sbjct: 103 KPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAAR 162

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNA-FTYSTLMDGF 131
               + D G Q +  T+  I++ LCK G    A   L+ +  R+   +    YST+MD  
Sbjct: 163 FADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSL 222

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A  LF  M S G + D V+YN LI+G C     +EA +L   M+ KGI P V
Sbjct: 223 CKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNV 282

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+N L     +   +  A  +   M    V  D  TYN+ I G C    + +AV++F  
Sbjct: 283 QTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFEL 342

Query: 252 L---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           +   G L    ++  Y+ LI G CK+  +  AL L   +    L  DVVT++ +I G C 
Sbjct: 343 MIHKGFLP---NLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCK 399

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G+ + A +LF  M E+   PN+     ++ G  +    S+ I L  +M++  +  +  I
Sbjct: 400 AGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVI 459

Query: 369 VSMVVD 374
            ++V+D
Sbjct: 460 YNIVLD 465



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 117/226 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY+++I G CK   ++KA  L  +M    +NPDVVT+++LI G C A     AK L
Sbjct: 350 PNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKEL 409

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M +    P++ T  +I+D L K     EA  L   M + ++  N   Y+ ++DG C 
Sbjct: 410 FCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCS 469

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+N A+ELF  + S G K D V+Y  +I G CK   +++A +L  +M   G  P   T
Sbjct: 470 FGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFT 529

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
           YN    GL + + +  + K    M+   ++AD +T    I     N
Sbjct: 530 YNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISYFSAN 575



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 124/229 (54%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V  +P+ VTYN++I G C    +  A  +F  M  +   P++VTY+SLIHG C   + 
Sbjct: 309 VHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNI 368

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           N+A  L  EM++ G+ P VVT++ ++   CK GK + A  L   M + D  PN  T + +
Sbjct: 369 NKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAII 428

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DG       + A  LF  ME M  + + V YNI+++G C   ++ +A  L+  + SKGI
Sbjct: 429 LDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGI 488

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           K  VV Y T+  GL +   ++ A  L  +M+ +    +  TYN F+ GL
Sbjct: 489 KIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGL 537



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 111/234 (47%), Gaps = 1/234 (0%)

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
            L   + S+G K D  +  I+IN  C         S+   M   G+ PTVVT+ TL  GL
Sbjct: 92  SLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGL 151

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
                V  A +  + ++     +++ TY   I+GLCK G    A+     +    C+LD+
Sbjct: 152 CAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDV 211

Query: 262 Q-AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
             AY+ ++D LCK G +  AL LF  +  + +  D+V YN +IHGLCN G+  +A  L  
Sbjct: 212 VIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLG 271

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +M    + PNV  F  L+  F +    S+   ++  M    V PD    + V+ 
Sbjct: 272 NMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVIS 325



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 135/305 (44%), Gaps = 1/305 (0%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A   F +M+     P    F  +   + K         L+  +    ++P+ +T + +++
Sbjct: 55  ALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIIN 114

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             C          + G M  +G     V++  LING C    V  A      +   G + 
Sbjct: 115 CLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQS 174

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS-TYNTFIDGLCKNGYIVEAVEL 248
              TY  +  GL +      A+   E+++  +   D    Y+T +D LCK+G + EA+ L
Sbjct: 175 NSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNL 234

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +     + D+ AYN LI GLC  GR + A  L  ++ R+ ++ +V T+N+++   C 
Sbjct: 235 FSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCK 294

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           DG + +A  +   M    V P+V+ + ++I G   +++    +++   M  K  +P+   
Sbjct: 295 DGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVT 354

Query: 369 VSMVV 373
            S ++
Sbjct: 355 YSSLI 359



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 1/208 (0%)

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           K K     +SL + + S GIKP V T   +   L  ++       +   M +  V     
Sbjct: 83  KMKHYATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVV 142

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           T+ T I+GLC  G +  A     +L  +  + +   Y  +I+GLCK+G    A+     +
Sbjct: 143 TFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKI 202

Query: 288 PRRVLVADVV-TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
             R    DVV  Y+ ++  LC DG + +A +LF  M    + P+++ + +LIHG     +
Sbjct: 203 KGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGR 262

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +   LL  M  K +MP+    +++VD
Sbjct: 263 WKEATTLLGNMMRKGIMPNVQTFNVLVD 290



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 84/158 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T   I+DGL K  F  +A +LF +M+  N+  +VV YN ++ G+C     N+A+ L
Sbjct: 420 PNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQEL 479

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  +  +G++  VV +  ++  LCK G +D+A  LL  M +    PN FTY+  + G   
Sbjct: 480 FSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQ 539

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
              I+R+ +    M+  G   D  +  +LI+ +  NKE
Sbjct: 540 RYDISRSTKYLLLMKGKGLSADATTTELLISYFSANKE 577



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 43/87 (49%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V Y T+I GLCKEG +D A+ L ++M+     P+  TYN  + GL    D + + +
Sbjct: 489 KIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTK 548

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKN 99
               M  +G+     T  +++     N
Sbjct: 549 YLLLMKGKGLSADATTTELLISYFSAN 575



 Score = 38.1 bits (87), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TYN  + GL +   + ++    L MKG+ ++ D  T   LI     AN  N A 
Sbjct: 523 CLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISYF-SANKENSAL 581

Query: 72  RLFFE 76
            +F +
Sbjct: 582 HVFLQ 586


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 133/349 (38%), Positives = 213/349 (61%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + +PN V YNTIID +CK   V++A  LF +M  + I+PDVVTY++LI G C      
Sbjct: 218 GNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLK 277

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  LF +M+ + ++P V TFN++++  CK+GKM E   + D+M+++ ++PN  TY++LM
Sbjct: 278 DAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLM 337

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+CL  ++N+A+ +F +M   G   D  SY+I+ING+CK K+ +EA++L++EM  K I 
Sbjct: 338 DGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNII 397

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTY++L  GL +  ++ +AL+L ++M    V  +  TYN+ +D LCK   + +A+ L
Sbjct: 398 PDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIAL 457

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
                    + DI  Y+ LI GLC+SG+LE A ++F  L  +    DV  Y IMI G C 
Sbjct: 458 LTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCV 517

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           +G  ++A  L   ME+N   P+   +  +I    + ++     +LL +M
Sbjct: 518 EGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566



 Score =  227 bits (578), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 203/359 (56%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + ++Y T+I GLCK G    A  L  ++ G  + P+VV YN++I  +C     NEA  LF
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ +G+ P VVT++ ++   C  GK+ +A  L + M+  +++P+ +T++ L++ FC  
Sbjct: 249 SEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKD 308

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK+   + +F  M   G K + V+YN L++GYC  KEV +A S++  M   G+ P + +Y
Sbjct: 309 GKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSY 368

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + +  G  +I + + A+ LF+EM R ++  D  TY++ IDGL K+G I  A++L   +  
Sbjct: 369 SIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHD 428

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                +I  YN ++D LCK+ +++ A+ L      +    D+ TY+I+I GLC  G+++ 
Sbjct: 429 RGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLED 488

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A  +F D+       +V  +  +I GF      ++ + LL KM++   +PDA    +++
Sbjct: 489 ARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIII 547



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 192/361 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V  N +I+  C+ G +  A ++F ++      PD +T+ +L  GLC      +A  
Sbjct: 117 KPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFL 176

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +++  G     +++  ++  LCK G+   A  LL  +    V+PN   Y+T++D  C
Sbjct: 177 FHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMC 236

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +N A +LF  M S G   D V+Y+ LI+G+C   ++++A+ L+ +M+ + IKP V 
Sbjct: 237 KVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVY 296

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N L     +  +++    +F+ M +  +  +  TYN+ +DG C    + +A  +F T+
Sbjct: 297 TFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTM 356

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  DIQ+Y+ +I+G CK  + + A+ LF+ + R+ ++ DVVTY+ +I GL   G++
Sbjct: 357 AQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRI 416

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A  L   M +  V PN+  + +++    + ++  K I LL K K+K   PD S  S++
Sbjct: 417 SYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSIL 476

Query: 373 V 373
           +
Sbjct: 477 I 477



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 187/362 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N ++Y++          VD A +LF ++   N  P    +N ++  L  +  ++    
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M  +G++P++V  N++++  C+ G +  A  +   +++    P+  T++TL  G C
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLC 166

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G+I +A      + ++G   D +SY  LI+G CK  E   AL L + +    ++P VV
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YNT+   + ++  V  A  LF EM    ++ D  TY+  I G C  G + +A++LF  +
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM 286

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +   + D+  +N L++  CK G+++    +F  + ++ +  + VTYN ++ G C   ++
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +KA  +F  M +  V P++  +  +I+GF +I K  + + L  +M  K ++PD    S +
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406

Query: 373 VD 374
           +D
Sbjct: 407 ID 408



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 151/280 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  T+N +++  CK+G + + K +F  M  + I P+ VTYNSL+ G C   + N+AK 
Sbjct: 292 KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKS 351

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  M   GV P + +++++++  CK  K DEA  L   M ++++ P+  TYS+L+DG  
Sbjct: 352 IFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLS 411

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G+I+ A +L   M   G   +  +YN +++  CK  +V++A++L  +   KG +P + 
Sbjct: 412 KSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDIS 471

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L  GL +  ++E A K+FE++       D   Y   I G C  G   EA+ L   +
Sbjct: 472 TYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKM 531

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
               C  D + Y  +I  L K    ++A +L R +  R L
Sbjct: 532 EDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TY+ +I GLC+ G ++ A+ +F  +  +  N DV  Y  +I G C    +NEA  
Sbjct: 467 QPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALA 526

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
           L  +M D G  P   T+ +I+  L K  + D A +LL  M+ R +  N +
Sbjct: 527 LLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNFY 576


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 135/356 (37%), Positives = 218/356 (61%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + +PN V YNTIID +CK   V++A  LF +M  + I+PDVVTY++LI G C     N
Sbjct: 218 GNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLN 277

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  LF +M+ + ++P V TFN++++  CK+GKM E   + D+M+++ ++PN  TY++LM
Sbjct: 278 DAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLM 337

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+CL  ++N+A+ +F +M   G   D  SY+I+ING+CK K+ +EA++L++EM  K I 
Sbjct: 338 DGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNII 397

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTY++L  GL +  ++ +AL+L ++M    V     TYN+ +D LCK   + +A+ L
Sbjct: 398 PDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIAL 457

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              L     + ++  Y+ LI GLC+SG+LE A ++F  L  +    +V TY IMI G C 
Sbjct: 458 LTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCV 517

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           +G  ++A  L   ME+N   P+   +  +I    + ++     +LL +M  + V P
Sbjct: 518 EGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573



 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 204/359 (56%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + ++Y T+I GLCK G    A  L  ++ G  + P+VV YN++I  +C     NEA  LF
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ +G+ P VVT++ ++   C  GK+++A  L + M+  +++P+ +T++ L++ FC  
Sbjct: 249 SEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKD 308

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK+   + +F  M   G K + V+YN L++GYC  KEV +A S++  M   G+ P + +Y
Sbjct: 309 GKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSY 368

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + +  G  +I + + A+ LF+EM R ++  D  TY++ IDGL K+G I  A++L   +  
Sbjct: 369 SIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHD 428

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                 I+ YN ++D LCK  +++ A+ L   L  + +  ++ TY+I+I GLC  G+++ 
Sbjct: 429 RGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLED 488

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A  +F  +       NV  +  +I GF      ++ + LL KM++   +PDA    +++
Sbjct: 489 ARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIII 547



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 107/319 (33%), Positives = 169/319 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY+ +I G C  G ++ A  LF +M  ENI PDV T+N L++  C      E K +
Sbjct: 258 PDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTV 317

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  MM QG++P+ VT+N +MD  C   ++++A  + + M Q  V P+  +YS +++GFC 
Sbjct: 318 FDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCK 377

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K + A  LF  M       D V+Y+ LI+G  K+  +  AL L  +M  +G+ PT+ T
Sbjct: 378 IKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRT 437

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN++   L +IHQV+ A+ L  +++   +  +  TY+  I GLC++G + +A ++F  L 
Sbjct: 438 YNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLL 497

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +    L++  Y  +I G C  G    AL L   +     + D  TY I+I  L    + D
Sbjct: 498 VKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDEND 557

Query: 314 KAHDLFLDMEENAVAPNVI 332
            A  L  +M    V P  I
Sbjct: 558 MAEKLLREMIARGVRPRQI 576



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 193/361 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V  N +I+  C+ G +  A ++F ++      PD +T+ +LI GLC      +A  
Sbjct: 117 KPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFL 176

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +++  G     +++  ++  LCK G+   A  LL  +    V+PN   Y+T++D  C
Sbjct: 177 FHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMC 236

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +N A +LF  M S G   D V+Y+ LI+G+C   ++ +A+ L+ +M+ + IKP V 
Sbjct: 237 KVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVY 296

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N L     +  +++    +F+ M +  +  +  TYN+ +DG C    + +A  +F T+
Sbjct: 297 TFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTM 356

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  DIQ+Y+ +I+G CK  + + A+ LF+ + R+ ++ DVVTY+ +I GL   G++
Sbjct: 357 AQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRI 416

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A  L   M +  V P +  + +++    +I++  K I LL K+K+K + P+    S++
Sbjct: 417 SYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSIL 476

Query: 373 V 373
           +
Sbjct: 477 I 477



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 189/364 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N ++Y++          VD A +LF ++   N  P    +N ++  L  +  ++    
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M  +G++P++V  N++++  C+ G +  A  +   +++    P+  T++TL+ G C
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLC 166

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G+I +A      + ++G   D +SY  LI+G CK  E   AL L + +    ++P VV
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YNT+   + ++  V  A  LF EM    ++ D  TY+  I G C  G + +A++LF  +
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM 286

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +   + D+  +N L++  CK G+++    +F  + ++ +  + VTYN ++ G C   ++
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +KA  +F  M +  V P++  +  +I+GF +I K  + + L  +M  K ++PD    S +
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406

Query: 373 VDLL 376
           +D L
Sbjct: 407 IDGL 410



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 182/363 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    +N I+  L K         L  +M+   I P++V  N LI+  C       A  +
Sbjct: 83  PPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 142

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +++  G  P  +TF  ++  LC  G++ +A    D +V      +  +Y TL+ G C 
Sbjct: 143 FAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCK 202

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A +L   ++    + + V YN +I+  CK K V EA  L+ EM+SKGI P VVT
Sbjct: 203 VGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVT 262

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  G   + ++  A+ LF +M  +++  D  T+N  ++  CK+G + E   +F  + 
Sbjct: 263 YSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMM 322

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + +   YN L+DG C    +  A  +F ++ +  +  D+ +Y+IMI+G C   + D
Sbjct: 323 KQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFD 382

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A +LF +M    + P+V+ + +LI G  +  + S  ++L+ +M ++ V P     + ++
Sbjct: 383 EAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSIL 442

Query: 374 DLL 376
           D L
Sbjct: 443 DAL 445


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 139/363 (38%), Positives = 219/363 (60%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVTY  ++D LC  G VD A A F ++  E + PD V + +LIHGLC  + W++A+ L
Sbjct: 411 PDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEEL 470

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+ +G+ P+ + FN +++ LCK G +  A  + DLMV+ DV+ +  TY+TL+DG+CL
Sbjct: 471 AVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCL 530

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A +L   M   G K ++V+YN +INGYCKN  +E+A SL+R+M SKG+ P +VT
Sbjct: 531 HGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVT 590

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+T+  GLF+  +   A +L+  M +  +  D  TYN  + GLC+N    +A+ +F+ L 
Sbjct: 591 YSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLY 650

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           ++   L+ + +N +ID L K GR + A +LF SL  R LV +VVTY +M+  L   G ++
Sbjct: 651 LIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLE 710

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +  DLFL +E+N    N  +   L+   ++  +  K    L K+ E     +AS    +V
Sbjct: 711 ELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLV 770

Query: 374 DLL 376
            L+
Sbjct: 771 LLV 773



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 192/364 (52%), Gaps = 2/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYN+II  L K   +DKA  + ++M      P+ +T+NSL+HG C +   N+A  +
Sbjct: 236 PDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGV 295

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   GV+P V T+N +M  LCKNG+  EA ++ D MV+R  +PN+ TY TL+ G+  
Sbjct: 296 FKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYAT 355

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G + +   L   M   G + D   +NILI  Y K+ +V++A+ L+ +M  +G+ P  VT
Sbjct: 356 EGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVT 415

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL-FRTL 252
           Y  +   L  + +V+ A+  F  +  + +  D   +   I GLC      +A EL    +
Sbjct: 416 YGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMI 475

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           G   C  +I  +N L++ LCK G +  A  +F  + R  +  DV+TYN +I G C  G++
Sbjct: 476 GRGICPNNI-FFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKV 534

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A  L   M  + V PN + + T+I+G+ +  +      L  +M  K V P     S +
Sbjct: 535 DEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTI 594

Query: 373 VDLL 376
           +  L
Sbjct: 595 LQGL 598



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 182/348 (52%), Gaps = 7/348 (2%)

Query: 5   NGEIGV---VCK----PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSL 57
           N  IGV   +C+    P+  TYNT++  LCK G   +A+ +F  M      P+  TY +L
Sbjct: 290 NDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTL 349

Query: 58  IHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV 117
           +HG        +   L   M+  G+QP    FN+++    K+GK+D+A  L   M ++ +
Sbjct: 350 LHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGL 409

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
            P+  TY  +MD  C+ GK++ A   FG + S G   D V +  LI+G C   + ++A  
Sbjct: 410 NPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEE 469

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           L  EM+ +GI P  + +NTL   L +   V  A  +F+ M R DV  D  TYNT IDG C
Sbjct: 470 LAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYC 529

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
            +G + EA +L   + +   + +   YN +I+G CK+GR+E A  LFR +  + +   +V
Sbjct: 530 LHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIV 589

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
           TY+ ++ GL    +   A +L+L M ++ +  ++  +  ++ G  + N
Sbjct: 590 TYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNN 637



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/335 (33%), Positives = 170/335 (50%), Gaps = 8/335 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM------KGENINPDVVTYNSLIHGLCH-A 64
           C PN  +Y  ++ GLC E    +A  L   M      +G    PDVV+YN++I+GL    
Sbjct: 158 CTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRG-GYPPDVVSYNTVINGLLREG 216

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
              + A  LF +M+DQG+ P VVT+N I+  L K   MD+A+ +L  MV+    PN  T+
Sbjct: 217 RQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITH 276

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           ++L+ G+C +GK N A  +F  M   G + D  +YN L+   CKN    EA  ++  MV 
Sbjct: 277 NSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVK 336

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           +G KP   TY TL  G      +     L + M R+ +  D   +N  I    K+G + +
Sbjct: 337 RGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDD 396

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A+ LF  +       D   Y  ++D LC  G+++ A+  F  L    L  D V +  +IH
Sbjct: 397 AMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIH 456

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           GLC   + DKA +L ++M    + PN I F TL++
Sbjct: 457 GLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLN 491



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 183/394 (46%), Gaps = 42/394 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +TY+ +ID   + G +D A A   ++       + +T++ L+  LC     +EA  +
Sbjct: 89  PNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDI 148

Query: 74  FFEMMD-QGVQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDVR----PNAFTYSTL 127
               M   G  P+V ++ +++  LC   +  +A  LL  +MV  D R    P+  +Y+T+
Sbjct: 149 ALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTV 208

Query: 128 MDGFCLTGK-INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++G    G+ ++ A  LF  M   G   D V+YN +I+   K + +++A  +   MV  G
Sbjct: 209 INGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNG 268

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
             P  +T+N+L  G     +   A+ +F+ M RD V  D  TYNT +  LCKNG  +EA 
Sbjct: 269 AMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEAR 328

Query: 247 ELF------------RTLGIL-----------------------KCELDIQAYNCLIDGL 271
           ++F             T G L                         + D   +N LI   
Sbjct: 329 KIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTY 388

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
            K G+++ A+ LF  + R+ L  D VTY I++  LC  G++D A   F  +    + P+ 
Sbjct: 389 TKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDA 448

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++F  LIHG    +K  K  EL  +M  + + P+
Sbjct: 449 VVFRNLIHGLCARDKWDKAEELAVEMIGRGICPN 482



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 172/355 (48%), Gaps = 16/355 (4%)

Query: 35  AKALFLQM---KGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           A +LF +M       + P+++TY+ +I         + A      ++  G     +TF+ 
Sbjct: 72  AISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSP 131

Query: 92  IMDELCKNGKMDEASRLLDLMVQR----DVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
           ++  LC   +  EA   +D+ ++R       PN F+Y+ L+ G C   +  +A  L  +M
Sbjct: 132 LLKALCDKKRTSEA---MDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTM 188

Query: 148 -----ESMGCKHDDVSYNILINGYCK-NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
                   G   D VSYN +ING  +  ++++ A  L+ +M+ +G+ P VVTYN++   L
Sbjct: 189 MVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISAL 248

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
            +   ++ A  +   M ++    +  T+N+ + G C +G   +A+ +F+ +     E D+
Sbjct: 249 SKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDV 308

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
             YN L+  LCK+GR   A ++F S+ +R    +  TY  ++HG   +G + K H L   
Sbjct: 309 FTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDM 368

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           M  N + P+  IF  LI  + +  K    + L  KM+ + + PD     +V+D L
Sbjct: 369 MVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDAL 423



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 115/221 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTYNT+I+G CK G ++ A +LF QM  + +NP +VTY++++ GL  A     AK 
Sbjct: 550 KPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKE 609

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L+  M+  G++  + T+N+I+  LC+N   D+A R+   +   D      T++ ++D   
Sbjct: 610 LYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALL 669

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+ + A++LF S+ + G   + V+Y +++    +   +EE   L+  +   G      
Sbjct: 670 KGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSR 729

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
             N L   L +  +V  A     ++  ++ + + ST  + +
Sbjct: 730 MLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLV 770


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 135/349 (38%), Positives = 209/349 (59%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + +PN V Y+TIID +CK+  V+ A  L+ +M  + I+PDVVTY+SLI G C      
Sbjct: 191 GKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLK 250

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A  LF  M+   + P+V TF++++D  CK GK+ EA  +L +M++++V+ +  TY++LM
Sbjct: 251 YAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLM 310

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+CL  ++N+A+ LF  M   G   D  SY+I+ING+CK K V+EA+ L+ EM  K I 
Sbjct: 311 DGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIF 370

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTYN+L  GL +  +   AL+L +EM      ++  TYN+ +D +CKN ++ +A+ L
Sbjct: 371 PNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVL 430

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +     + DI  Y  LI+GLCK GRL+ A ++F  L  +    ++ TY  +I+G CN
Sbjct: 431 LTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCN 490

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            G  D+   +   M++N   PN I +  LIH     ++  K  +LL +M
Sbjct: 491 KGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREM 539



 Score =  233 bits (595), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 118/352 (33%), Positives = 203/352 (57%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + V+Y T+I+GLC+ G    A  L  ++ G+ + P+VV Y+++I  +C     N+A  L+
Sbjct: 162 DQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLY 221

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ + + P VVT++ ++   C  GK+  A  L + M+  ++ PN +T+S L+DGFC  
Sbjct: 222 CEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKE 281

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK+  A+ +   M     K D V+YN L++GYC  K+V +A SL+  M  +G+ P V +Y
Sbjct: 282 GKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSY 341

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + +  G  +I  V+ A+KLFEEM    +  +  TYN+ +DGLCK+G    A+EL   +  
Sbjct: 342 SIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHD 401

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                +I  YN ++D +CK+  ++ A+ L   +  + +  D+ TY ++I+GLC  G++D 
Sbjct: 402 RGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDD 461

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           A  +F D+     +PN+  + +LI+GF       + + +L KMK+   +P+A
Sbjct: 462 AQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNA 513



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 185/347 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  + +  I+  L K      A +L  QM+   I PD +T N L++          +  +
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +++ +G  P  VTF +++  LC  G++ +A    D +V +  + +  +Y TL++G C 
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A +L   ++    + + V Y+ +I+  CK+K V +A  LY EMVSK I P VVT
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y++L  G   + ++++A+ LF  M  D++  +  T++  IDG CK G + EA  +   + 
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +LD+  YN L+DG C   ++  A  LF  + +R +  DV +Y+IMI+G C    +D
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVD 355

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +A  LF +M    + PNV+ + +L+ G  +  + S  +EL+ +M ++
Sbjct: 356 EAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDR 402



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 196/364 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ +T N +++   + G +  + ++F ++  +  +PD VT+  LI GLC   + ++A  
Sbjct: 90  KPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALY 149

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +++ QG Q   V++  +++ LC+ G+   A +LL  +  + VRPN   YST++D  C
Sbjct: 150 FHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMC 209

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +N A +L+  M S     D V+Y+ LI+G+C   +++ A+ L+  M+S  I P V 
Sbjct: 210 KDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVY 269

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++ L  G  +  +V  A  +   M + +V  D  TYN+ +DG C    + +A  LF  +
Sbjct: 270 TFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVM 329

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D+ +Y+ +I+G CK   ++ A++LF  +  + +  +VVTYN ++ GLC  G+ 
Sbjct: 330 AQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRT 389

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A +L  +M +     N+I + +++    + N   K I LL K+KEK + PD    +++
Sbjct: 390 SCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVL 449

Query: 373 VDLL 376
           ++ L
Sbjct: 450 INGL 453



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 94/280 (33%), Positives = 157/280 (56%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T++ +IDG CKEG V +AK +   M  +N+  DVVTYNSL+ G C     N+AK L
Sbjct: 266 PNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSL 325

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M  +GV P V +++++++  CK   +DEA +L + M  + + PN  TY++L+DG C 
Sbjct: 326 FNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCK 385

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G+ + A EL   M   G   + ++YN +++  CKN  V++A+ L  ++  KGI+P + T
Sbjct: 386 SGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFT 445

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL ++ +++ A K+FE++     + +  TY + I+G C  G+  E + +   + 
Sbjct: 446 YTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMK 505

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
              C  +   Y  LI  L +    + A +L R +  R L+
Sbjct: 506 DNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGLL 545



 Score =  166 bits (420), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 172/328 (52%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P  + +  ++  L  A  +  A  L  +M   G++P  +T N++M+   + G +  +  +
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
              ++++   P+A T++ L+ G CL G++++A      + + G + D VSY  LING C+
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             E + A+ L R +  K ++P VV Y+T+   + +   V  A  L+ EM    ++ D  T
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           Y++ I G C  G +  AV+LF  +       ++  ++ LIDG CK G++  A  +   + 
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
           ++ +  DVVTYN ++ G C   Q++KA  LF  M +  V P+V  +  +I+GF +I    
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVD 355

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + ++L  +M  K++ P+    + +VD L
Sbjct: 356 EAMKLFEEMHCKQIFPNVVTYNSLVDGL 383



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 62/103 (60%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TY  +I+GLCK G +D A+ +F  +  +  +P++ TY SLI+G C+   ++E   
Sbjct: 440 QPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLA 499

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           +  +M D G  P+ +T+ +++  L +  + D+A +LL  M+ R
Sbjct: 500 MLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIAR 542


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 135/374 (36%), Positives = 212/374 (56%), Gaps = 22/374 (5%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE---NINPDVVTY-----NSLIHGLCHA 64
           +PN +TY TI+DG+CK G  D   AL L  K E   +I P+VV +       +I+G C +
Sbjct: 211 QPNQITYGTIVDGMCKMG--DTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSS 268

Query: 65  NDWNEAKRLFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
             W+EA++L  EM+++  + P VVT+N +++   K GK  EA  L D M+ R + P+  T
Sbjct: 269 GRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTIT 328

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           YS+++DGFC   +++ AE +F  M + GC  D +++N LI GYC+ K V++ + L  EM 
Sbjct: 329 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT 388

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
             G+    +TY TL  G  ++  +  A  L +EM    V  +  T NT +DGLC NG + 
Sbjct: 389 EAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLK 448

Query: 244 EAVELFRTLGILK-----------CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           +A+E+F+ +   K            E D+Q YN LI GL   G+   A EL+  +P R +
Sbjct: 449 DALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 508

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
           V D +TYN +IHGLC   ++D+A  +F  M   + +PNV+ F TLI+G+ +  +    +E
Sbjct: 509 VPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 568

Query: 353 LLHKMKEKKVMPDA 366
           L  +M  + ++ +A
Sbjct: 569 LFCEMGRRGIVANA 582



 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 116/357 (32%), Positives = 196/357 (54%), Gaps = 11/357 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ VTYN +I+   KEG   +A+ L+ +M    I P  +TY+S+I G C  N  + A+ 
Sbjct: 288 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEH 347

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F+ M  +G  P ++TFN ++   C+  ++D+  +LL  M +  +  N  TY+TL+ GFC
Sbjct: 348 MFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFC 407

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK------- 185
             G +N A++L   M S G   + V+ N L++G C N ++++AL +++ M          
Sbjct: 408 QVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDAS 467

Query: 186 ----GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
               G++P V TYN L  GL    +   A +L+EEM    +  DT TYN+ I GLCK   
Sbjct: 468 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSR 527

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           + EA ++F ++G      ++  +  LI+G CK+GR++  LELF  + RR +VA+ +TY  
Sbjct: 528 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 587

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           +IHG    G ++ A D+F +M  + V P+ I    ++ G     +  + + +L  ++
Sbjct: 588 LIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 186/360 (51%), Gaps = 11/360 (3%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  ++  ++   C    +  A + F ++     +P VVT+++L+HGLC  +  +EA  LF
Sbjct: 112 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLF 171

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M     +P+VVTF  +M+ LC+ G++ EA  LLD M++  ++PN  TY T++DG C  
Sbjct: 172 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 227

Query: 135 GKINRAEELFGSMESMGCKHDDV------SYNILINGYCKNKEVEEALSLYREMVS-KGI 187
           G    A  L   ME +     +V          +ING+C +    EA  L +EM+  K I
Sbjct: 228 GDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKI 287

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P VVTYN L     +  +   A +L++EM    +   T TY++ IDG CK   +  A  
Sbjct: 288 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEH 347

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +F  +    C  DI  +N LI G C++ R++  ++L   +    LVA+ +TY  +IHG C
Sbjct: 348 MFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFC 407

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G ++ A DL  +M  + V PNV+   TL+ G     K    +E+   M++ K+  DAS
Sbjct: 408 QVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDAS 467



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 146/291 (50%), Gaps = 11/291 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +T+NT+I G C+   VD    L  +M    +  + +TY +LIHG C   D N A+
Sbjct: 357 CSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQ 416

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-----------VRPN 120
            L  EM+  GV P+VVT N ++D LC NGK+ +A  +   M +             V P+
Sbjct: 417 DLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPD 476

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY+ L+ G    GK   AEEL+  M   G   D ++YN +I+G CK   ++EA  ++ 
Sbjct: 477 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFD 536

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            M SK   P VVT+ TL  G  +  +V+  L+LF EM R  + A+  TY T I G  K G
Sbjct: 537 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVG 596

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            I  A+++F+ +       D      ++ GL     L+ A+ +   L   V
Sbjct: 597 NINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQMSV 647



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 182/373 (48%), Gaps = 17/373 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + +  ++  + + G +D   +L  +M+   +  +  ++  L+   C  +    A   
Sbjct: 76  PSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALST 135

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F ++   G  P+VVTF+ ++  LC   ++ EA   LDL  Q   +PN  T++TLM+G C 
Sbjct: 136 FGKITKLGFHPTVVTFSTLLHGLCVEDRISEA---LDLFHQM-CKPNVVTFTTLMNGLCR 191

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIKPTVV 192
            G++  A  L   M   G + + ++Y  +++G CK  +   AL+L R+M     IKP VV
Sbjct: 192 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVV 251

Query: 193 TY-----NTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            +       +  G     +   A +L +EM +R  ++ D  TYN  I+   K G   EA 
Sbjct: 252 IWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAE 311

Query: 247 ELFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           EL+  +   GI+   +    Y+ +IDG CK  RL+ A  +F  +  +    D++T+N +I
Sbjct: 312 ELYDEMLPRGIIPSTI---TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLI 368

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            G C   ++D    L  +M E  +  N I + TLIHGF ++   +   +LL +M    V 
Sbjct: 369 AGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVC 428

Query: 364 PDASIVSMVVDLL 376
           P+    + ++D L
Sbjct: 429 PNVVTCNTLLDGL 441



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 153/304 (50%), Gaps = 11/304 (3%)

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  LF +M+     PSV+ F  +M  + + G++D    L   M  R V  NA++++ LM
Sbjct: 61  DAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILM 120

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
             FC   K+  A   FG +  +G     V+++ L++G C    + EAL L+ +M     K
Sbjct: 121 KCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMC----K 176

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVT+ TL  GL    +V  A+ L + M  D +  +  TY T +DG+CK G  V A+ L
Sbjct: 177 PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNL 236

Query: 249 FRTLGILK------CELDIQAYNCLIDGLCKSGRLEIALELFRS-LPRRVLVADVVTYNI 301
            R +  +           ++   C+I+G C SGR   A +L +  L R+ +  DVVTYN 
Sbjct: 237 LRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNA 296

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +I+    +G+  +A +L+ +M    + P+ I + ++I GF + N+      + + M  K 
Sbjct: 297 LINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 356

Query: 362 VMPD 365
             PD
Sbjct: 357 CSPD 360



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 125/219 (57%), Gaps = 12/219 (5%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-----------NINPDVVTYNSLIH 59
           VC PN VT NT++DGLC  G +  A  +F  M+              + PDV TYN LI 
Sbjct: 427 VC-PNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILIS 485

Query: 60  GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
           GL +   + EA+ L+ EM  +G+ P  +T+N ++  LCK  ++DEA+++ D M  +   P
Sbjct: 486 GLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSP 545

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           N  T++TL++G+C  G+++   ELF  M   G   + ++Y  LI+G+ K   +  AL ++
Sbjct: 546 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIF 605

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +EM++ G+ P  +T   +  GL+   +++ A+ + E++Q
Sbjct: 606 QEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 157/335 (46%), Gaps = 11/335 (3%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           ++ A  LF  M      P V+ +  L+  +      +    L  +M  + V  +  +F +
Sbjct: 59  LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +M   C   K+  A      + +    P   T+STL+ G C+  +I+ A +LF  M    
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM---- 174

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
           CK + V++  L+NG C+   V EA++L   M+  G++P  +TY T+  G+ ++     AL
Sbjct: 175 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 234

Query: 212 KLFEEMQR------DDVAADTSTYNTFIDGLCKNGYIVEAVELFR-TLGILKCELDIQAY 264
            L  +M+       + V          I+G C +G   EA +L +  L   K   D+  Y
Sbjct: 235 NLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTY 294

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
           N LI+   K G+   A EL+  +  R ++   +TY+ MI G C   ++D A  +F  M  
Sbjct: 295 NALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMAT 354

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
              +P++I F TLI G+ R  +    I+LLH+M E
Sbjct: 355 KGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTE 389



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 11/280 (3%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +++A  L   MV+    P+   +  LM      G+++    L   ME      +  S+ I
Sbjct: 59  LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L+  +C   ++  ALS + ++   G  PTVVT++TL  GL    ++  AL LF +M + +
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCKPN 178

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           V     T+ T ++GLC+ G +VEAV L   +     + +   Y  ++DG+CK G    AL
Sbjct: 179 VV----TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 234

Query: 282 ELFRSLPR------RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM-EENAVAPNVIIF 334
            L R +         V++  +     MI+G C+ G+  +A  L  +M E   ++P+V+ +
Sbjct: 235 NLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTY 294

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             LI+ FV+  K  +  EL  +M  + ++P     S ++D
Sbjct: 295 NALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMID 334



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 100/198 (50%), Gaps = 4/198 (2%)

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L +G+ + K +E+A+ L+ +MV     P+V+ +  L   +  + +++  + L  +M+   
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           V  +  ++   +   C    +  A+  F  +  L     +  ++ L+ GLC   R+  AL
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           +LF  + +     +VVT+  +++GLC +G++ +A  L   M E+ + PN I + T++ G 
Sbjct: 169 DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 224

Query: 342 VRINKPSKVIELLHKMKE 359
            ++      + LL KM+E
Sbjct: 225 CKMGDTVSALNLLRKMEE 242



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 4/175 (2%)

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           G  EI  +E A+ LF +M R         +   +  + + G +   + L R + + +   
Sbjct: 52  GFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPC 111

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           +  ++  L+   C   +L  AL  F  + +      VVT++ ++HGLC + ++ +A DLF
Sbjct: 112 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLF 171

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             M      PNV+ F TL++G  R  +  + + LL +M E  + P+      +VD
Sbjct: 172 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVD 222


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 138/361 (38%), Positives = 213/361 (59%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T N +I+ LC+   +  A ++  +M    I PD VT+ +LI+GLC+     EA  LF
Sbjct: 120 NDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELF 179

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM  +   P+ VTF +++D LCK G + EA  + + M ++ V PN +TY+ LM+G+CL 
Sbjct: 180 NEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLR 239

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            ++N A ++F  M   GC     SY+ILINGYCK++ ++EA +L  +M  K + P  VTY
Sbjct: 240 LEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTY 299

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           NTL  GL     +  A +LF++M    +  +  TY+  +DGLCK+G++ EA++L  ++  
Sbjct: 300 NTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQE 359

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
            K E DI  YN LI G+  +G+LE+A ELF  L    +   V TYNIMI GL  +G  D+
Sbjct: 360 RKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDE 419

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A+ LF  ME++   P+   +  +I GF++   PS  I+L+ +M  ++   D+S   M++D
Sbjct: 420 AYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479

Query: 375 L 375
           L
Sbjct: 480 L 480



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 135/227 (59%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G  C P+  +Y+ +I+G CK   +D+AKAL  QM  + + P+ VTYN+L+ GLCHA+  
Sbjct: 253 VGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSL 312

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA+ LF +M   G+ P++ T+++++D LCK+G ++EA +LL  M +R + P+   Y+ L
Sbjct: 313 LEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNIL 372

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G  + GK+  A+ELF  + + G +    +YNI+I G  K    +EA  L+R+M   G 
Sbjct: 373 IQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGF 432

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
            P   +YN +  G  +      A++L +EM     +AD+ST+   +D
Sbjct: 433 LPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 150/291 (51%), Gaps = 35/291 (12%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNTVT+  ++D LCK+G V +A+ +F  M  + + P++ TYN+L++G C   + N+A ++
Sbjct: 189 PNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKV 248

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM----- 128
           F  M+ +G  PSV +++++++  CK+ ++DEA  LL  M ++++ PN  TY+TLM     
Sbjct: 249 FEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCH 308

Query: 129 ------------------------------DGFCLTGKINRAEELFGSMESMGCKHDDVS 158
                                         DG C  G +  A +L  SM+    + D V 
Sbjct: 309 ASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVL 368

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YNILI G     ++E A  L+ ++ + GI+P+V TYN +  GL +    + A KLF +M+
Sbjct: 369 YNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKME 428

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
            D    D+ +YN  I G  +N     A++L   +   +   D   +  L+D
Sbjct: 429 DDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479



 Score =  130 bits (328), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 134/275 (48%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D+A      M+  + RP+       +       + +    L   M+  G  H+D + NI
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LIN  C+   +  A+S+  +M   GI+P  VT+ TL  GL    +++ A++LF EM   D
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              +T T+   +D LCK G + EA  +F T+     E +I  YN L++G C    +  A 
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           ++F  +  +     V +Y+I+I+G C   ++D+A  L   M E  + PN + + TL+ G 
Sbjct: 247 KVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGL 306

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              +   +  EL  KM    ++P+    S+++D L
Sbjct: 307 CHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGL 341


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 137/364 (37%), Positives = 211/364 (57%), Gaps = 4/364 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V Y+ IID LCK+G    A+ LF +M  + I P+V TYN +I G C    W++A+R
Sbjct: 77  KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 136

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+++ + P V+TFN ++    K GK+ EA +L D M+ R + P+  TY++++ GFC
Sbjct: 137 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 196

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              + + A+ +F  M S     D V++N +I+ YC+ K V+E + L RE+  +G+     
Sbjct: 197 KHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 252

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  E+  +  A  LF+EM    V  DT T N  + G C+N  + EA+ELF  +
Sbjct: 253 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 312

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            + K +LD  AYN +I G+CK  +++ A +LF SLP   +  DV TYN+MI G C    +
Sbjct: 313 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAI 372

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A+ LF  M++N   P+   + TLI G ++  +  K IEL+ +M+      DA  + MV
Sbjct: 373 SDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 432

Query: 373 VDLL 376
            DL+
Sbjct: 433 ADLI 436



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 160/332 (48%), Gaps = 39/332 (11%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M++ G+ P V+TFN +++ LC  G++ EA+ L++ MV + +  +  TY T+++G C  G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
              A  L   ME    K D V Y+ +I+  CK+    +A  L+ EM+ KGI P V TYN 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 197 LFLGLFEIHQVEHAL-----------------------------KLFE------EMQRDD 221
           +  G     +   A                              KLFE      EM    
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           +  DT TYN+ I G CK+    +A  +F     L    D+  +N +ID  C++ R++  +
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGM 236

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           +L R + RR LVA+  TYN +IHG C    ++ A DLF +M  + V P+ I    L++GF
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
               K  + +EL   ++  K+  D    ++++
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIII 328



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 124/225 (55%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           ++  P+ VT+NTIID  C+   VD+   L  ++    +  +  TYN+LIHG C  ++ N 
Sbjct: 210 LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 269

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+ LF EM+  GV P  +T N+++   C+N K++EA  L +++    +  +   Y+ ++ 
Sbjct: 270 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 329

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C   K++ A +LF S+   G + D  +YN++I+G+C    + +A  L+ +M   G +P
Sbjct: 330 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 389

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
              TYNTL  G  +  +++ +++L  EM+ +  + D  T     D
Sbjct: 390 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 434



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%)

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
            +N LI+GLC  GR+  A  L   +  + L  DVVTY  +++G+C  G    A +L   M
Sbjct: 12  TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 71

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           EE  + P+V+I+  +I    +    S    L  +M EK + P+    + ++D
Sbjct: 72  EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 123



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 47/81 (58%)

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           V+T+N +I+GLC +G++ +A  L   M    +  +V+ + T+++G  ++      + LL 
Sbjct: 10  VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 69

Query: 356 KMKEKKVMPDASIVSMVVDLL 376
           KM+E  + PD  I S ++D L
Sbjct: 70  KMEETHIKPDVVIYSAIIDRL 90


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 137/364 (37%), Positives = 211/364 (57%), Gaps = 4/364 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V Y+ IID LCK+G    A+ LF +M  + I P+V TYN +I G C    W++A+R
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+++ + P V+TFN ++    K GK+ EA +L D M+ R + P+  TY++++ GFC
Sbjct: 353 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 412

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              + + A+ +F  M S     D V++N +I+ YC+ K V+E + L RE+  +G+     
Sbjct: 413 KHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  E+  +  A  LF+EM    V  DT T N  + G C+N  + EA+ELF  +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            + K +LD  AYN +I G+CK  +++ A +LF SLP   +  DV TYN+MI G C    +
Sbjct: 529 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAI 588

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A+ LF  M++N   P+   + TLI G ++  +  K IEL+ +M+      DA  + MV
Sbjct: 589 SDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 648

Query: 373 VDLL 376
            DL+
Sbjct: 649 ADLI 652



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/377 (32%), Positives = 197/377 (52%), Gaps = 21/377 (5%)

Query: 13  KPNTVTYNTIIDGLCKE----------------GFVDKAKALFLQMKGENINPDVVTYNS 56
           +P+ VT+NT++ GLC E                GF++ A ALF QM    + P V+T+N+
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE-AVALFDQMVEIGLTPVVITFNT 231

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
           LI+GLC      EA  L  +M+ +G+   VVT+  I++ +CK G    A  LL  M +  
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           ++P+   YS ++D  C  G  + A+ LF  M   G   +  +YN +I+G+C      +A 
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            L R+M+ + I P V+T+N L     +  ++  A KL +EM    +  DT TYN+ I G 
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           CK+    +A  +F     L    D+  +N +ID  C++ R++  ++L R + RR LVA+ 
Sbjct: 412 CKHNRFDDAKHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
            TYN +IHG C    ++ A DLF +M  + V P+ I    L++GF    K  + +EL   
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527

Query: 357 MKEKKVMPDASIVSMVV 373
           ++  K+  D    ++++
Sbjct: 528 IQMSKIDLDTVAYNIII 544



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 177/373 (47%), Gaps = 19/373 (5%)

Query: 16  TVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFF 75
            V  N +I    +    D A +L+ +M+   I  ++ ++N LI   C  +  + +   F 
Sbjct: 106 AVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFG 165

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMD---------------EASRLLDLMVQRDVRPN 120
           ++   G QP VVTFN ++  LC   ++                EA  L D MV+  + P 
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             T++TL++G CL G++  A  L   M   G   D V+Y  ++NG CK  + + AL+L  
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           +M    IKP VV Y+ +   L +      A  LF EM    +A +  TYN  IDG C  G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
              +A  L R +   +   D+  +N LI    K G+L  A +L   +  R +  D VTYN
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            MI+G C   + D A  +F  M     +P+V+ F T+I  + R  +  + ++LL ++  +
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461

Query: 361 KVMPDASIVSMVV 373
            ++ + +  + ++
Sbjct: 462 GLVANTTTYNTLI 474



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 124/225 (55%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           ++  P+ VT+NTIID  C+   VD+   L  ++    +  +  TYN+LIHG C  ++ N 
Sbjct: 426 LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 485

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+ LF EM+  GV P  +T N+++   C+N K++EA  L +++    +  +   Y+ ++ 
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C   K++ A +LF S+   G + D  +YN++I+G+C    + +A  L+ +M   G +P
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
              TYNTL  G  +  +++ +++L  EM+ +  + D  T     D
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 148/310 (47%), Gaps = 18/310 (5%)

Query: 74  FFEMMDQGVQP--SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           FF+ M +  +P  + V  N ++    +  + D A  L   M  R +  N ++++ L+  F
Sbjct: 93  FFDYMVRS-RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCF 151

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL--------------- 176
           C   K++ +   FG +  +G + D V++N L++G C    + EAL               
Sbjct: 152 CDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAV 211

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           +L+ +MV  G+ P V+T+NTL  GL    +V  A  L  +M    +  D  TY T ++G+
Sbjct: 212 ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 271

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           CK G    A+ L   +     + D+  Y+ +ID LCK G    A  LF  +  + +  +V
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
            TYN MI G C+ G+   A  L  DM E  + P+V+ F  LI   V+  K  +  +L  +
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 391

Query: 357 MKEKKVMPDA 366
           M  + + PD 
Sbjct: 392 MLHRCIFPDT 401



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 131/279 (46%), Gaps = 15/279 (5%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D+A    D MV+      A   + ++  F    + + A  L+  ME      +  S+NI
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL---------- 211
           LI  +C   ++  +LS + ++   G +P VVT+NTL  GL    ++  AL          
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 212 -----KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
                 LF++M    +     T+NT I+GLC  G ++EA  L   +      +D+  Y  
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           +++G+CK G  + AL L   +    +  DVV Y+ +I  LC DG    A  LF +M E  
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +APNV  +  +I GF    + S    LL  M E+++ PD
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 20/220 (9%)

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           V  N +I  + +    + A+SLYR+M  + I   + ++N L     + H++  +L  F +
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           + +     D  T+NT + GLC    I EA+ LF              Y      + ++G 
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALF-------------GY------MVETGF 207

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           LE A+ LF  +    L   V+T+N +I+GLC +G++ +A  L   M    +  +V+ + T
Sbjct: 208 LE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +++G  ++      + LL KM+E  + PD  I S ++D L
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 137/364 (37%), Positives = 211/364 (57%), Gaps = 4/364 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V Y+ IID LCK+G    A+ LF +M  + I P+V TYN +I G C    W++A+R
Sbjct: 288 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 347

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+++ + P V+TFN ++    K GK+ EA +L D M+ R + P+  TY++++ GFC
Sbjct: 348 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 407

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              + + A+ +F  M S     D V++N +I+ YC+ K V+E + L RE+  +G+     
Sbjct: 408 KHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 463

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  E+  +  A  LF+EM    V  DT T N  + G C+N  + EA+ELF  +
Sbjct: 464 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 523

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            + K +LD  AYN +I G+CK  +++ A +LF SLP   +  DV TYN+MI G C    +
Sbjct: 524 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAI 583

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A+ LF  M++N   P+   + TLI G ++  +  K IEL+ +M+      DA  + MV
Sbjct: 584 SDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 643

Query: 373 VDLL 376
            DL+
Sbjct: 644 ADLI 647



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 194/404 (48%), Gaps = 49/404 (12%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA---- 70
           N  ++N +I   C    +  + + F ++      PDVVT+N+L+HGLC  +  +EA    
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199

Query: 71  ------KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
                   LF +M++ G+ P V+TFN +++ LC  G++ EA+ L++ MV + +  +  TY
Sbjct: 200 GYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 259

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
            T+++G C  G    A  L   ME    K D V Y+ +I+  CK+    +A  L+ EM+ 
Sbjct: 260 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 319

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHAL-----------------------------KLFE 215
           KGI P V TYN +  G     +   A                              KLFE
Sbjct: 320 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 379

Query: 216 ------EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
                 EM    +  DT TYN+ I G CK+    +A  +F     L    D+  +N +ID
Sbjct: 380 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD----LMASPDVVTFNTIID 435

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
             C++ R++  ++L R + RR LVA+  TYN +IHG C    ++ A DLF +M  + V P
Sbjct: 436 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 495

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           + I    L++GF    K  + +EL   ++  K+  D    ++++
Sbjct: 496 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 539



 Score =  164 bits (414), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 177/368 (48%), Gaps = 14/368 (3%)

Query: 16  TVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFF 75
            V  N +I    +    D A +L+ +M+   I  ++ ++N LI   C  +  + +   F 
Sbjct: 106 AVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFG 165

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEA----------SRLLDLMVQRDVRPNAFTYS 125
           ++   G QP VVTFN ++  LC   ++ EA            L D MV+  + P   T++
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFN 225

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL++G CL G++  A  L   M   G   D V+Y  ++NG CK  + + AL+L  +M   
Sbjct: 226 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 285

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            IKP VV Y+ +   L +      A  LF EM    +A +  TYN  IDG C  G   +A
Sbjct: 286 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 345

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             L R +   +   D+  +N LI    K G+L  A +L   +  R +  D VTYN MI+G
Sbjct: 346 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 405

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            C   + D A  +F  M     +P+V+ F T+I  + R  +  + ++LL ++  + ++ +
Sbjct: 406 FCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 461

Query: 366 ASIVSMVV 373
            +  + ++
Sbjct: 462 TTTYNTLI 469



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 124/225 (55%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           ++  P+ VT+NTIID  C+   VD+   L  ++    +  +  TYN+LIHG C  ++ N 
Sbjct: 421 LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 480

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+ LF EM+  GV P  +T N+++   C+N K++EA  L +++    +  +   Y+ ++ 
Sbjct: 481 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 540

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C   K++ A +LF S+   G + D  +YN++I+G+C    + +A  L+ +M   G +P
Sbjct: 541 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 600

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
              TYNTL  G  +  +++ +++L  EM+ +  + D  T     D
Sbjct: 601 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 645



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 148/305 (48%), Gaps = 13/305 (4%)

Query: 74  FFEMMDQGVQP--SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           FF+ M +  +P  + V  N ++    +  + D A  L   M  R +  N ++++ L+  F
Sbjct: 93  FFDYMVRS-RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCF 151

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL----------SLYRE 181
           C   K++ +   FG +  +G + D V++N L++G C    + EAL          SL+ +
Sbjct: 152 CDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQ 211

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           MV  G+ P V+T+NTL  GL    +V  A  L  +M    +  D  TY T ++G+CK G 
Sbjct: 212 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 271

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
              A+ L   +     + D+  Y+ +ID LCK G    A  LF  +  + +  +V TYN 
Sbjct: 272 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 331

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           MI G C+ G+   A  L  DM E  + P+V+ F  LI   V+  K  +  +L  +M  + 
Sbjct: 332 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 391

Query: 362 VMPDA 366
           + PD 
Sbjct: 392 IFPDT 396



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D+A    D MV+      A   + ++  F    + + A  L+  ME      +  S+NI
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL---------- 211
           LI  +C   ++  +LS + ++   G +P VVT+NTL  GL    ++  AL          
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            LF++M    +     T+NT I+GLC  G ++EA  L   +      +D+  Y  +++G+
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           CK G  + AL L   +    +  DVV Y+ +I  LC DG    A  LF +M E  +APNV
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 326

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             +  +I GF    + S    LL  M E+++ PD
Sbjct: 327 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 360



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 25/220 (11%)

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           V  N +I  + +    + A+SLYR+M  + I   + ++N L     + H++  +L  F +
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           + +     D  T+NT + GLC    I EA+ LF                         G 
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALF-------------------------GY 201

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +     LF  +    L   V+T+N +I+GLC +G++ +A  L   M    +  +V+ + T
Sbjct: 202 MVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 261

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +++G  ++      + LL KM+E  + PD  I S ++D L
Sbjct: 262 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 301


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  258 bits (659), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 126/361 (34%), Positives = 214/361 (59%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TYN+I+ G C  G   +A     +M+ + + P+VVTY+SL++ LC      EA+++
Sbjct: 242 PDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKI 301

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M  +G++P + T+  ++   CK G++ E+ +L DLMV+  V+P+  TY+TL+DG CL
Sbjct: 302 FDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCL 361

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A +L  SM S+G K D V+Y  LINGYC+   +++AL+L++EMVS G+ P ++T
Sbjct: 362 AGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 421

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GLF   +   A +L+  + +     + STYN  + GLCKN    EA+ +F+ L 
Sbjct: 422 YNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 481

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   +L+ + +N +I  L K GR++ A +LF +     LV DV TY++M   L   G ++
Sbjct: 482 LTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLE 541

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +  DLFL MEEN  + +  +  +++   ++    ++    L  + EK    +AS  S ++
Sbjct: 542 ELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLL 601

Query: 374 D 374
           +
Sbjct: 602 E 602



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 184/355 (51%), Gaps = 12/355 (3%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEAKRL 73
           + +T+  ++ GLC +     A  + L+   E    PDV +YN+L+ GLC  N   EA  L
Sbjct: 126 DAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALEL 185

Query: 74  FFEMMDQ---GVQPSVVTFNVIMDELCKNG--------KMDEASRLLDLMVQRDVRPNAF 122
              M D    G  P VV++N +++   K G         MD+A  +L+ MV+  V P+  
Sbjct: 186 LHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCM 245

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TY++++ G+C +G+   A      M S G + + V+Y+ L+N  CKN    EA  ++  M
Sbjct: 246 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 305

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
             +G++P + TY TL  G  +  +V  + KLF+ M R  V  D  TYNT IDG C  G +
Sbjct: 306 TKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKM 365

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            EA +L  ++  +  + DI  Y  LI+G C+  R++ AL LF+ +    +  +++TYNI+
Sbjct: 366 DEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 425

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           + GL +  +   A +L++ + ++     +  +  ++HG  + N   + + +   +
Sbjct: 426 LQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 480



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 184/354 (51%), Gaps = 16/354 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TY  +I   C+ G +D   A    +  +    D +T+  L+ GLC     ++A  +
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR-----PNAFTYSTL 127
               M + G  P V ++N ++  LC   +  EA  LL +M   D R     P+  +Y+T+
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMA--DDRGGGSPPDVVSYNTV 207

Query: 128 MDGFCLTG--------KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           ++GF   G         +++A E+  +M   G   D ++YN +++GYC + + +EA+   
Sbjct: 208 LNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 267

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
           ++M S G++P VVTY++L   L +  +   A K+F+ M +  +  D +TY T + G CK 
Sbjct: 268 KKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKE 327

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G ++E+ +LF  +  +  + DI  YN LIDG C +G+++ A +L  S+    +  D+VTY
Sbjct: 328 GRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTY 387

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
             +I+G C   +MD A  LF +M  + V+PN+I +  ++ G     + +   EL
Sbjct: 388 GTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 441



 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 167/312 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY+++++ LCK G   +A+ +F  M    + PD+ TY +L+ G C      E+++
Sbjct: 276 EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEK 335

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M+  GV+P ++T+N ++D  C  GKMDEA++LL  MV   V+P+  TY TL++G+C
Sbjct: 336 LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYC 395

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +++ A  LF  M S G   + ++YNI++ G    +    A  LY  +   G +  + 
Sbjct: 396 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELS 455

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN +  GL + +  + AL++F+ +   D+  +T T+N  I  L K G + EA +LF   
Sbjct: 456 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAH 515

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D++ Y+ + + L + G LE   +LF S+      AD    N ++  L   G +
Sbjct: 516 SANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDI 575

Query: 313 DKAHDLFLDMEE 324
            +A      ++E
Sbjct: 576 TRAGTYLFMIDE 587



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 168/334 (50%), Gaps = 18/334 (5%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           + P V TY  LI   C A   +        ++ +G +   +TF  ++  LC + +  +A 
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA- 146

Query: 107 RLLDLMVQRDVR----PNAFTYSTLMDGFCLTGKINRAEELFGSM---ESMGCKHDDVSY 159
             +D++++R       P+ F+Y+ L+ G C   +   A EL   M      G   D VSY
Sbjct: 147 --MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204

Query: 160 NILINGYCKN--------KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
           N ++NG+ K         + +++A+ +   MV  G+ P  +TYN++  G     Q + A+
Sbjct: 205 NTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI 264

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
              ++M+ D V  +  TY++ ++ LCKNG   EA ++F ++     E DI  Y  L+ G 
Sbjct: 265 GTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGH 324

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           CK GR+  + +LF  + R  +  D++TYN +I G C  G+MD+A  L   M    V P++
Sbjct: 325 CKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDI 384

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + + TLI+G+ R+++    + L  +M    V P+
Sbjct: 385 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 418



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 102/203 (50%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V  KP+ VTY T+I+G C+   +D A ALF +M    ++P+++TYN ++ GL H    
Sbjct: 376 VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 435

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             AK L+  +   G Q  + T+N+I+  LCKN   DEA R+   +   D++    T++ +
Sbjct: 436 AAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 495

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +      G+++ A++LF +  + G   D  +Y+++     +   +EE   L+  M   G 
Sbjct: 496 IGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGC 555

Query: 188 KPTVVTYNTLFLGLFEIHQVEHA 210
                  N++   L +   +  A
Sbjct: 556 SADSRMLNSIVRKLLQRGDITRA 578



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 15/217 (6%)

Query: 175 ALSLYREMVSKG---IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           A+S Y  M   G   + PTV TY  L        +++        + +     D  T+  
Sbjct: 73  AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132

Query: 232 FIDGLCKNGYIVEAVEL-FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
            + GLC +    +A+++  R +  L C  D+ +YN L+ GLC   R + ALEL   +   
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192

Query: 291 V---LVADVVTYNIMIHGLCNDG--------QMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
                  DVV+YN +++G   +G         MDKA ++   M +N V P+ + + +++H
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 252

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           G+    +P + I  L KM+   V P+    S +++ L
Sbjct: 253 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 289


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  258 bits (658), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/367 (38%), Positives = 216/367 (58%), Gaps = 9/367 (2%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M N   E+G+  KP+ V Y TIID LCK G VD A +LF QM+   I PDVV Y SL++G
Sbjct: 163 MVNQMVEMGI--KPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNG 220

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           LC++  W +A  L   MM + ++P V+TFN ++D   K GK+ +A  L + M+Q  + PN
Sbjct: 221 LCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPN 280

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
            FTY++L++G C+ G+++ A ++F  ME+ GC  D V+Y  LING+CK K+VE+A+ ++ 
Sbjct: 281 IFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFY 340

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           EM  KG+    +TY TL  G   + +   A ++F  M    V  +  TYN  +  LC NG
Sbjct: 341 EMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNG 400

Query: 241 YIVEAVELFRTLGILKCELD-----IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
            + +A+ +F  +   K E+D     I+ YN L+ GLC +G+LE AL +F  + +R +   
Sbjct: 401 KVNKALMIFEDMQ--KREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIG 458

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           ++TY I+I G+C  G++  A +LF  +    V PNV+ + T+I G  R     +   L  
Sbjct: 459 IITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFR 518

Query: 356 KMKEKKV 362
           KMKE  V
Sbjct: 519 KMKEDGV 525



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 197/365 (53%), Gaps = 3/365 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  T+ ++I+G C    +++A ++  QM    I PDVV Y ++I  LC     + A  
Sbjct: 138 EPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALS 197

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF +M + G++P VV +  +++ LC +G+  +A  LL  M++R ++P+  T++ L+D F 
Sbjct: 198 LFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFV 257

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A+EL+  M  M    +  +Y  LING C    ++EA  ++  M +KG  P VV
Sbjct: 258 KEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVV 317

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y +L  G  +  +VE A+K+F EM +  +  +T TY T I G    G    A E+F  +
Sbjct: 318 AYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHM 377

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL---VADVVTYNIMIHGLCND 309
                  +I+ YN L+  LC +G++  AL +F  + +R +     ++ TYN+++HGLC +
Sbjct: 378 VSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYN 437

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G+++KA  +F DM++  +   +I +  +I G  +  K    + L   +  K V P+    
Sbjct: 438 GKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTY 497

Query: 370 SMVVD 374
           + ++ 
Sbjct: 498 TTMIS 502



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 183/349 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + +  +++ + K    D    L   ++   ++ D+ T N L++  C ++    A   
Sbjct: 69  PSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSF 128

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++M  G +P + TF  +++  C   +++EA  +++ MV+  ++P+   Y+T++D  C 
Sbjct: 129 LGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCK 188

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A  LF  ME+ G + D V Y  L+NG C +    +A  L R M+ + IKP V+T
Sbjct: 189 NGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVIT 248

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L     +  ++  A +L+ EM +  +A +  TY + I+GLC  G + EA ++F  + 
Sbjct: 249 FNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLME 308

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D+ AY  LI+G CK  ++E A+++F  + ++ L  + +TY  +I G    G+ +
Sbjct: 309 TKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPN 368

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
            A ++F  M    V PN+  +  L+H      K +K + +   M+++++
Sbjct: 369 VAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREI 417



 Score =  174 bits (440), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 174/344 (50%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
           ++A  LF  M      P ++ +  L++ +     ++    L   +   GV   + T N++
Sbjct: 53  NEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLL 112

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           M+  C++ +   AS  L  +++    P+ FT+++L++GFCL  +I  A  +   M  MG 
Sbjct: 113 MNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGI 172

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
           K D V Y  +I+  CKN  V+ ALSL+ +M + GI+P VV Y +L  GL    +   A  
Sbjct: 173 KPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADL 232

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           L   M +  +  D  T+N  ID   K G +++A EL+  +  +    +I  Y  LI+GLC
Sbjct: 233 LLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLC 292

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
             GRL+ A ++F  +  +    DVV Y  +I+G C   +++ A  +F +M +  +  N I
Sbjct: 293 MEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTI 352

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            + TLI GF  + KP+   E+   M  + V P+    ++++  L
Sbjct: 353 TYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCL 396



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 164/307 (53%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           Y  ++    H+  +NEA  LF  M++    PS++ F  +++ + K  K D    L   + 
Sbjct: 39  YREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQ 98

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
              V  + +T + LM+ FC + +   A    G +  +G + D  ++  LING+C    +E
Sbjct: 99  IMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIE 158

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           EA+S+  +MV  GIKP VV Y T+   L +   V++AL LF +M+   +  D   Y + +
Sbjct: 159 EAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLV 218

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
           +GLC +G   +A  L R +   K + D+  +N LID   K G+L  A EL+  + +  + 
Sbjct: 219 NGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIA 278

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            ++ TY  +I+GLC +G++D+A  +F  ME     P+V+ + +LI+GF +  K    +++
Sbjct: 279 PNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKI 338

Query: 354 LHKMKEK 360
            ++M +K
Sbjct: 339 FYEMSQK 345



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 134/248 (54%), Gaps = 38/248 (15%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY ++I+GLC EG +D+A+ +F  M+ +   PDVV Y SLI+G C      +A ++
Sbjct: 279 PNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKI 338

Query: 74  FFEM-----------------------------------MDQGVQPSVVTFNVIMDELCK 98
           F+EM                                   + +GV P++ T+NV++  LC 
Sbjct: 339 FYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCY 398

Query: 99  NGKMDEASRLLDLMVQRD---VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHD 155
           NGK+++A  + + M +R+   V PN  TY+ L+ G C  GK+ +A  +FG M+       
Sbjct: 399 NGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIG 458

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
            ++Y I+I G CK  +V++AL+L+  + SKG+KP VVTY T+  GLF    +  A  LF 
Sbjct: 459 IITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFR 518

Query: 216 EMQRDDVA 223
           +M+ D V+
Sbjct: 519 KMKEDGVS 526



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 145/284 (51%), Gaps = 4/284 (1%)

Query: 95  ELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
           E+ +NG    + +EA  L   MV+    P+   ++ L++      K +    L   ++ M
Sbjct: 41  EILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIM 100

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G  +D  + N+L+N +C++ +   A S   +++  G +P + T+ +L  G    +++E A
Sbjct: 101 GVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEA 160

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           + +  +M    +  D   Y T ID LCKNG++  A+ LF  +       D+  Y  L++G
Sbjct: 161 MSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNG 220

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LC SGR   A  L R + +R +  DV+T+N +I     +G++  A +L+ +M + ++APN
Sbjct: 221 LCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPN 280

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +  + +LI+G     +  +  ++ + M+ K   PD    + +++
Sbjct: 281 IFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLIN 324


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  257 bits (657), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 137/349 (39%), Positives = 209/349 (59%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G++ +PN V YNTIID LCK+  V  A  L  +M  + I PDVVTY +LI+G        
Sbjct: 197 GLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLK 256

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  LF +M+ + ++P V TFN+++D LCK G+M +A  +L +M+++ V  N  TY++LM
Sbjct: 257 EAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLM 316

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+ L  + N+A  +F +M   G   D  SY+I+ING CK K V+EA++L++EM SK + 
Sbjct: 317 DGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMA 376

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  VTYN+L  GL +  ++  A  L  EM      AD  TY++ +D LCKN  + +A+ L
Sbjct: 377 PNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITL 436

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +     + +I  Y  L+DGLCK+GRL+ A  +++ L  +    DV  YN+M++GLC 
Sbjct: 437 ITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCK 496

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           +G  D+A  L   ME+N   P+ + + TL+      +K  K ++LL +M
Sbjct: 497 EGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREM 545



 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 188/358 (52%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           +N I+  L K      A +   QM+ + I PD+ T+N LI+  CH    N A  +  ++ 
Sbjct: 67  FNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIF 126

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
             G  P  VT   ++  LC NGK+ EA    D ++ +    +  +Y TL++G C TG+  
Sbjct: 127 KLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETR 186

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A ++   ++ +  + + V YN +I+  CK+K V  A  L  EM+ K I P VVTY TL 
Sbjct: 187 AALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLI 246

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            G   + +++ A+ LF +M   ++  D  T+N  +DGLCK G + +A  +   +     +
Sbjct: 247 YGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVD 306

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            +I  YN L+DG     +   A  +F ++ RR +  DV +Y+IMI+GLC    +D+A +L
Sbjct: 307 SNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNL 366

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           F +M   ++APN + + +LI G ++  + S   +L+++M  +    D    S ++D L
Sbjct: 367 FKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDAL 424



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 101/173 (58%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNTVTYN++IDGL K G +  A  L  +M       DV+TY+SL+  LC  +  ++A  L
Sbjct: 377 PNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITL 436

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++ DQG+QP++ T+ +++D LCKNG++ +A  +   ++ +    +   Y+ +++G C 
Sbjct: 437 ITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCK 496

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
            G  + A  L   ME  GC  D V+Y  L+    +N + ++A+ L REM+ +G
Sbjct: 497 EGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 134/307 (43%), Gaps = 35/307 (11%)

Query: 103 DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
           D  S    ++  R+     F ++ ++         + A      ME    + D  ++NIL
Sbjct: 46  DAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNIL 105

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           IN +C    +  A S+  ++   G  P  VT  TL  GL    +V  AL   +++     
Sbjct: 106 INCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGF 165

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS-------- 274
             D  +Y T I+GLCK G    A+++ R +  L  + ++  YN +ID LCK         
Sbjct: 166 HLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASD 225

Query: 275 ---------------------------GRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
                                      GRL+ A+ LF  +  + +  DV T+NI++ GLC
Sbjct: 226 LCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLC 285

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            +G+M KA ++   M +  V  N++ + +L+ G+  + + +K   + + M  + V PD  
Sbjct: 286 KEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQ 345

Query: 368 IVSMVVD 374
             S++++
Sbjct: 346 SYSIMIN 352



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 59/101 (58%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TY  ++DGLCK G +  A+A++  +  +  + DV  YN +++GLC    ++EA  
Sbjct: 446 QPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALS 505

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           L  +M D G  P  VT+  ++  L +N K D+A +LL  M+
Sbjct: 506 LVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMI 546


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  257 bits (657), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 137/366 (37%), Positives = 213/366 (58%), Gaps = 1/366 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ VTY  +I+GLCK G  D A  L  +M+   I  DVV YN++I GLC     ++A 
Sbjct: 211 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAF 270

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF +M  +G++P V T+N ++  LC  G+  +ASRLL  M+++++ P+   ++ L+D F
Sbjct: 271 DLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAF 330

Query: 132 CLTGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
              GK+  AE+L+  M +S  C  D V+YN LI G+CK K VEE + ++REM  +G+   
Sbjct: 331 VKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            VTY TL  G F+    ++A  +F++M  D V  D  TYN  +DGLC NG +  A+ +F 
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE 450

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +     +LDI  Y  +I+ LCK+G++E   +LF SL  + +  +VVTY  M+ G C  G
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
             ++A  LF++M+E+   PN   + TLI   +R    +   EL+ +M+      DAS   
Sbjct: 511 LKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG 570

Query: 371 MVVDLL 376
           +V ++L
Sbjct: 571 LVTNML 576



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 188/363 (51%), Gaps = 1/363 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  TY+  I+  C+   +  A A+  +M      P +VT NSL++G CH N  +EA  L 
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M++ G QP  VTF  ++  L ++ K  EA  L++ MV +  +P+  TY  +++G C  
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+ + A  L   ME    + D V YN +I+G CK K +++A  L+ +M +KGIKP V TY
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L   L    +   A +L  +M   ++  D   +N  ID   K G +VEA +L+  +  
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348

Query: 255 LK-CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            K C  D+ AYN LI G CK  R+E  +E+FR + +R LV + VTY  +IHG       D
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  +F  M  + V P+++ +  L+ G          + +   M+++ +  D    + ++
Sbjct: 409 NAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468

Query: 374 DLL 376
           + L
Sbjct: 469 EAL 471



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 181/364 (49%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V ++ ++  + K    D   +L  QM+   I+ ++ TY+  I+  C  +  + A  +
Sbjct: 73  PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +MM  G  PS+VT N +++  C   ++ EA  L+D MV+   +P+  T++TL+ G   
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K + A  L   M   GC+ D V+Y  +ING CK  E + AL+L  +M    I+  VV 
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+  GL +   ++ A  LF +M+   +  D  TYN  I  LC  G   +A  L   + 
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR-RVLVADVVTYNIMIHGLCNDGQM 312
                 D+  +N LID   K G+L  A +L+  + + +    DVV YN +I G C   ++
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++  ++F +M +  +  N + + TLIHGF +         +  +M    V PD    +++
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432

Query: 373 VDLL 376
           +D L
Sbjct: 433 LDGL 436



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 153/299 (51%), Gaps = 1/299 (0%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  LF +M+     PS+V F+ ++  + K  K D    L + M    +  N +TYS  
Sbjct: 57  DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++ FC   +++ A  + G M  +G     V+ N L+NG+C    + EA++L  +MV  G 
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P  VT+ TL  GLF+ ++   A+ L E M       D  TY   I+GLCK G    A+ 
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +   K E D+  YN +IDGLCK   ++ A +LF  +  + +  DV TYN +I  LC
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM-KEKKVMPD 365
           N G+   A  L  DM E  + P+++ F  LI  FV+  K  +  +L  +M K K   PD
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 174/330 (52%), Gaps = 1/330 (0%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D A  LF  M      P +V ++ L+  +   N ++    L  +M + G+  ++ T+++
Sbjct: 56  LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
            ++  C+  ++  A  +L  M++    P+  T ++L++GFC   +I+ A  L   M  MG
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + D V++  L++G  ++ +  EA++L   MV KG +P +VTY  +  GL +  + + AL
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            L  +M++  + AD   YNT IDGLCK  ++ +A +LF  +     + D+  YN LI  L
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM-EENAVAPN 330
           C  GR   A  L   +  + +  D+V +N +I     +G++ +A  L+ +M +     P+
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           V+ + TLI GF +  +  + +E+  +M ++
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQR 385



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 139/274 (50%)

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K+D+A  L   MV+    P+   +S L+       K +    L   M+++G  H+  +Y+
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           I IN +C+  ++  AL++  +M+  G  P++VT N+L  G    +++  A+ L ++M   
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
               DT T+ T + GL ++    EAV L   + +  C+ D+  Y  +I+GLCK G  ++A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           L L   + +  + ADVV YN +I GLC    MD A DLF  ME   + P+V  +  LI  
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
                + S    LL  M EK + PD    + ++D
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  257 bits (656), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 134/356 (37%), Positives = 204/356 (57%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT+ +++ G C    ++ A ALF Q+ G    P+VVTY +LIH LC     N A  
Sbjct: 149 EPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVE 208

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +M D G++P+VVT+N ++  LC+ G+  +A+ LL  M++R ++PN  T++ L+D F 
Sbjct: 209 IFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFV 268

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GKI  A+EL+  M  M    D  +Y  LING C    ++EA  ++  M S G  P  V
Sbjct: 269 KVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEV 328

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  G  +  +VE   K+F EM +  + A+T TY   I G C  G    A E+F  +
Sbjct: 329 TYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQM 388

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           G  +   DI+ YN L+DGLC +G +E AL +F+ + +R +  ++VTY I+I G+C  G++
Sbjct: 389 GSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKV 448

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           + A DLF  +    + PNVI + T+I GF R     +   L  KMKE   +P+ S+
Sbjct: 449 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNESV 504



 Score =  256 bits (654), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 124/323 (38%), Positives = 195/323 (60%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G+  +PN VTY T+I  LCK   ++ A  +F QM    I P+VVTYNSL+ GLC    W
Sbjct: 179 VGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRW 238

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  L  +MM +G+QP+V+TF  ++D   K GK+ EA  L  +M+Q  V P+ FTY+ L
Sbjct: 239 SDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTAL 298

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++G C  G+++ A ++F  MES G   ++V+Y  LI+G+CK+K VE+   ++ EM  KG+
Sbjct: 299 INGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGL 358

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
               +TY  L  G   + + + A ++F +M       D  TYN  +DGLC NGY+ +A+ 
Sbjct: 359 VANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALM 418

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +F+ +   + +++I  Y  +I G+CK G++E A +LF SL  + +  +V+TY  MI G C
Sbjct: 419 IFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC 478

Query: 308 NDGQMDKAHDLFLDMEENAVAPN 330
             G + +A  LF  M+E+   PN
Sbjct: 479 RRGFIHEADALFKKMKEDGFLPN 501



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 179/344 (52%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
           ++A  LF +M      P +V +  L+  +     ++    LF +M   G+ P + T N++
Sbjct: 64  NEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIV 123

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           M+ +C++ +   AS  L  M++    P+  T+++L+ GFC   +I  A  LF  +  MG 
Sbjct: 124 MNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGF 183

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
           + + V+Y  LI+  CKN+ +  A+ ++ +M   GI+P VVTYN+L  GL EI +   A  
Sbjct: 184 RPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAW 243

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           L  +M +  +  +  T+   ID   K G I+EA EL++ +  +    D+  Y  LI+GLC
Sbjct: 244 LLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLC 303

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
             GRL+ A ++F  +       + VTY  +IHG C   +++    +F +M +  +  N I
Sbjct: 304 TYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTI 363

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +  LI G+  + +P    E+ ++M  ++  PD    ++++D L
Sbjct: 364 TYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGL 407



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 185/360 (51%), Gaps = 2/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +  ++  + K    D   +LF QM+   I+P + T N +++ +C ++    A   
Sbjct: 80  PSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCF 139

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +MM  G +P +VTF  ++   C   ++++A  L D +V    RPN  TY+TL+   C 
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +N A E+F  M   G + + V+YN L++G C+     +A  L R+M+ +GI+P V+T
Sbjct: 200 NRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVIT 259

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L     ++ ++  A +L++ M +  V  D  TY   I+GLC  G + EA ++F  + 
Sbjct: 260 FTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLME 319

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +   Y  LI G CKS R+E   ++F  + ++ LVA+ +TY ++I G C  G+ D
Sbjct: 320 SNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPD 379

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A ++F  M      P++  +  L+ G        K + +   M+++++  D +IV+  +
Sbjct: 380 VAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREM--DINIVTYTI 437



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 169/321 (52%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           Y  ++    H   +NEA  LF  M+     PS+V F  ++  + K  + D    L + M 
Sbjct: 50  YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
              + P  +T + +M+  C + +  RA    G M  +G + D V++  L++G+C    +E
Sbjct: 110 ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIE 169

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           +AL+L+ ++V  G +P VVTY TL   L +   + HA+++F +M  + +  +  TYN+ +
Sbjct: 170 DALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLV 229

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
            GLC+ G   +A  L R +     + ++  +  LID   K G++  A EL++ + +  + 
Sbjct: 230 SGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVY 289

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            DV TY  +I+GLC  G++D+A  +F  ME N   PN + + TLIHGF +  +     ++
Sbjct: 290 PDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKI 349

Query: 354 LHKMKEKKVMPDASIVSMVVD 374
            ++M +K ++ +    ++++ 
Sbjct: 350 FYEMSQKGLVANTITYTVLIQ 370


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  256 bits (655), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 135/358 (37%), Positives = 204/358 (56%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           + Y+TI+D LCK+G +  A   F  M  + I PD+V YNSLIHGLC    WNEA  L   
Sbjct: 149 IAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGN 208

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           MM +G+ P+V TFNV++D  CK GK+  A  ++  MV   V P+  TY++++ G CL  +
Sbjct: 209 MMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQ 268

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +N A ++F  M   G   + V+Y+ LI+G+CK + + +A+ +  EMV+ G+   VVT++T
Sbjct: 269 MNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWST 328

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G  +  + E A++LF  M       +  T    +DGL K  +  EA+ LFR +  + 
Sbjct: 329 LIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMN 388

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            EL+I  YN ++DG+C  G+   A ELF  LP + +  DVV Y  MI GLC +G +D A 
Sbjct: 389 LELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAE 448

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           DL + MEEN   PN   +  L+ G ++    S+  + L  MK K +  DA+   +++ 
Sbjct: 449 DLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTELLIS 506



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 180/349 (51%), Gaps = 4/349 (1%)

Query: 9   GVVCK---PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G+ CK   P+ V YN++I GLC  G  ++A  L   M  + I P+V T+N L+   C   
Sbjct: 173 GMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEG 232

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             + AK +   M+  GV+P VVT+N ++   C   +M++A ++ +LM+ + + PN  TYS
Sbjct: 233 KISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYS 292

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           +L+ G+C T  IN+A  +   M + G   D V+++ LI G+CK    E A+ L+  M   
Sbjct: 293 SLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEH 352

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
              P + T   +  GLF+      A+ LF +M++ ++  +  TYN  +DG+C  G   +A
Sbjct: 353 HQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDA 412

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            ELF  L     ++D+ AY  +I GLCK G L+ A +L   +       +  TYN+++ G
Sbjct: 413 RELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRG 472

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           L     + ++    + M+   ++ +      LI  F   NK +  +++ 
Sbjct: 473 LLQRYDISRSTKYLMLMKGKGLSADATTTELLISYF-SANKENSALQVF 520



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 174/364 (47%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    + T+   + K      A +L        + PDV T   +I+ LCH         +
Sbjct: 5   PPDKDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSV 64

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   GV+P+VVTF  +++ LC  G +  A+R  D +       N++T+ T+++G C 
Sbjct: 65  LGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCK 124

Query: 134 TGKINRAEELFGSMESMGCKHDD-VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            G    A      +E      D  ++Y+ +++  CK+  +  AL+ +  M  KGI+P +V
Sbjct: 125 VGDTAGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLV 184

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN+L  GL    +   A  L   M R  +  +  T+N  +D  CK G I  A  +   +
Sbjct: 185 AYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFM 244

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  E D+  YN +I G C   ++  A+++F  +  + L+ +VVTY+ +IHG C    +
Sbjct: 245 VHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNI 304

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +KA  +  +M  N +  +V+ + TLI GF +  +P   IEL   M E   +P+    +++
Sbjct: 305 NKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAII 364

Query: 373 VDLL 376
           +D L
Sbjct: 365 LDGL 368



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 171/366 (46%), Gaps = 7/366 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  T   +I+ LC         ++   M    + P VVT+ +LI+GLC   +   A R
Sbjct: 39  KPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAAR 98

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF-TYSTLMDGF 131
               + D G + +  T   I++ LCK G    A   L+ +  R+   +    YST+MD  
Sbjct: 99  FADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNRGFDLLIAYSTIMDSL 158

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A   F  M   G + D V+YN LI+G C      EA +L   M+ KGI P V
Sbjct: 159 CKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNV 218

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+N L     +  ++  A  +   M    V  D  TYN+ I G C    + +AV++F  
Sbjct: 219 QTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFEL 278

Query: 252 L---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           +   G+L    ++  Y+ LI G CK+  +  A+ +   +    L  DVVT++ +I G C 
Sbjct: 279 MIHKGLLP---NVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCK 335

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G+ + A +LF  M E+   PN+     ++ G  +    S+ I L  KM++  +  +   
Sbjct: 336 AGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVT 395

Query: 369 VSMVVD 374
            ++V+D
Sbjct: 396 YNIVLD 401


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  256 bits (655), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 136/363 (37%), Positives = 205/363 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +   Y+ ++DGLCK+G V +A  LF QM G+ I P++ TYN LIHGLC+ + W EA 
Sbjct: 162 CNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAA 221

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   MM +G+ P V TFNVI     K G +  A  +   M    +  N  TY++++   
Sbjct: 222 PLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAH 281

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C+  ++  A E+F  M   GC  + V+YN LI+G+C+ K + +A+    EMV+ G+ P V
Sbjct: 282 CMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDV 341

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT++TL  G  +  +   A +LF  M +     D  T    +DGL K  +  EA+ LFR 
Sbjct: 342 VTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRE 401

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L  +  +LDI  Y+ +++G+C SG+L  ALELF  L  + +  DVVTYNIMI+GLC +G 
Sbjct: 402 LEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGL 461

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D A DL + MEEN   P+   +   + G +R  + SK  + L  MK K    +A+   +
Sbjct: 462 LDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKL 521

Query: 372 VVD 374
           +++
Sbjct: 522 LIN 524



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 177/363 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    +N +   + K      A +L   M    + P+V T+N +I+ LC  N       +
Sbjct: 24  PCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSV 83

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   GV+PS+VTF  I++ LC  G + +A R +D +       + +T   +++G C 
Sbjct: 84  LGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCK 143

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A      ME   C  D  +Y+ +++G CK+  V EAL L+ +M  KGI+P + T
Sbjct: 144 VGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFT 203

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  GL    + + A  L   M R  +  D  T+N       K G I  A  +F  +G
Sbjct: 204 YNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMG 263

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  E ++  YN +I   C   +++ A+E+F  + R+  + ++VTYN +IHG C    M+
Sbjct: 264 HMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMN 323

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA     +M  N + P+V+ + TLI GF +  KP    EL   M +   +PD    ++++
Sbjct: 324 KAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIIL 383

Query: 374 DLL 376
           D L
Sbjct: 384 DGL 386



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 117/228 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYN++I G C+   ++KA     +M    ++PDVVT+++LI G C A     AK
Sbjct: 302 CLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAK 361

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LFF M   G  P + T  +I+D L K     EA  L   + + +   +   YS +++G 
Sbjct: 362 ELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGM 421

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +GK+N A ELF  + S G K D V+YNI+ING CK   +++A  L  +M   G  P  
Sbjct: 422 CSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDE 481

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            TYN    GL   +++  + K    M+     A+ +T    I+    N
Sbjct: 482 CTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYFSAN 529



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/334 (24%), Positives = 148/334 (44%), Gaps = 35/334 (10%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           VD A   + +M      P V  +N L   +     +  A  L   M   GV+P+V T N+
Sbjct: 7   VDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNI 66

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++ LC+         +L LM +  V P+  T++T+++G C+ G + +A      ++ MG
Sbjct: 67  VINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMG 126

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + D  +   +ING CK      ALS  ++                              
Sbjct: 127 YESDRYTRGAIINGLCKVGHSSAALSYLKK------------------------------ 156

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
                M+  +   D + Y+  +DGLCK+G + EA++LF  +     + ++  YNCLI GL
Sbjct: 157 -----MEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGL 211

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C   R + A  L  ++ R+ ++ DV T+N++       G + +A  +F  M    +  NV
Sbjct: 212 CNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNV 271

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + + ++I     +N+    +E+   M  K  +P+
Sbjct: 272 VTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPN 305



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 35/238 (14%)

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
           K V+ AL  Y +MV+    P V  +N LF  + ++     A+ L + M    V  + ST+
Sbjct: 5   KSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTH 64

Query: 230 NTFI-----------------------------------DGLCKNGYIVEAVELFRTLGI 254
           N  I                                   +GLC  G + +A+     L  
Sbjct: 65  NIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKD 124

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           +  E D      +I+GLCK G    AL   + +  +    DV  Y+ ++ GLC DG + +
Sbjct: 125 MGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFE 184

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           A DLF  M    + PN+  +  LIHG    ++  +   LL  M  K +MPD    +++
Sbjct: 185 ALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVI 242


>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 137/363 (37%), Positives = 204/363 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +   YN ++DGLCK+G V +A  LF QM G+ I PD+ TYN LIHGLC+ + W EA 
Sbjct: 214 CNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAA 273

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   MM +G+ P V TFNVI     K G +  A  +   M    +  +  TYS+++   
Sbjct: 274 PLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVH 333

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C+  ++  A E+F  M   GC  + V+Y  LI+G+C+ K + +A+    EMV+ G+ P +
Sbjct: 334 CMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNI 393

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NTL  G  +  +   A +LF  M +     D  T    +DGL K  +  EA+ LFR 
Sbjct: 394 VTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRE 453

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L  +  +LDI  Y+ +++G+C SG+L  ALELF  L  + +  DVVTYNIMI+GLC +G 
Sbjct: 454 LEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGL 513

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D A DL + MEEN   P+   +   + G +R  + SK  + L  MK K    +A+   +
Sbjct: 514 LDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKL 573

Query: 372 VVD 374
           +++
Sbjct: 574 LIN 576



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 175/363 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    +N +   + K      A +L   M    + P+V T+N +I+ LC  N       +
Sbjct: 76  PCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGFSV 135

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   GV+PS+VTF  I++ LC  G + +A R +D +       + +T   +++G C 
Sbjct: 136 LGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCK 195

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A      ME   C  D  +YN +++G CK+  V EA  L+ +M  KGI+P + T
Sbjct: 196 VGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFT 255

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  GL    + + A  L   M R  +  D  T+N       K G I  A  +F  +G
Sbjct: 256 YNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMG 315

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  E D+  Y+ +I   C   +++ A+E+F  + R+  + ++VTY  +IHG C    M+
Sbjct: 316 HMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMN 375

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA     +M  N + PN++ + TLI GF +  KP    EL   M +   +PD    ++++
Sbjct: 376 KAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIIL 435

Query: 374 DLL 376
           D L
Sbjct: 436 DGL 438



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 116/228 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY ++I G C+   ++KA     +M    ++P++VT+N+LI G C A     AK
Sbjct: 354 CLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAK 413

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LFF M   G  P + T  +I+D L K     EA  L   + + +   +   YS +++G 
Sbjct: 414 ELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGM 473

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +GK+N A ELF  + S G K D V+YNI+ING CK   +++A  L  +M   G  P  
Sbjct: 474 CSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDE 533

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            TYN    GL   +++  + K    M+     A+ +T    I+    N
Sbjct: 534 CTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYFSAN 581



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 150/344 (43%), Gaps = 35/344 (10%)

Query: 22  IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG 81
            +D L     VD A   + +M      P V  +N L   +     +  A  L   M   G
Sbjct: 49  FLDSLRNVKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIG 108

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
           V+P+V T N++++ LC+         +L LM +  V P+  T++T+++G C+ G + +A 
Sbjct: 109 VKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAI 168

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
                ++ MG + D  +   +ING CK      ALS  ++                    
Sbjct: 169 RFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKK-------------------- 208

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
                          M+  +   D + YN  +DGLCK+G + EA +LF  +     + D+
Sbjct: 209 ---------------MEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDL 253

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
             YNCLI GLC   R + A  L  ++ R+ ++ DV T+N++       G + +A  +F  
Sbjct: 254 FTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSF 313

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           M    +  +V+ + ++I     +N+    +E+   M  K  +P+
Sbjct: 314 MGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPN 357


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 131/351 (37%), Positives = 200/351 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN +TY+ +IDGLCK   V +A  L   MK    +PDV+TY  L+ GLC  +    A 
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  EM+D G  P++VT+N ++  LC+  ++ +A  L+  M  R   PN  TY TL+DG 
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++  A  +   M   G   D + YN+LING CK  +V+E+++L R  VS GIKP V
Sbjct: 307 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 366

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+++  GL   ++++ A +L   ++      D   Y+T IDGLCK G + EA +L+  
Sbjct: 367 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEV 426

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ D+  Y+ LIDGLCK+GR++ A  L   + R       +TYN +I GLC+   
Sbjct: 427 MAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNH 486

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           +D+A +L  +ME +  AP+ + +  LIHG  R+ +    + LL + K + V
Sbjct: 487 LDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCV 537



 Score =  243 bits (621), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 137/404 (33%), Positives = 210/404 (51%), Gaps = 42/404 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN VTYN++IDGLCK    D+A+ LF  MK    +P +VTYN+L+ GL        A 
Sbjct: 110 CEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAM 169

Query: 72  RLFFEM-------MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
            LF EM       MD    P+V+T++V++D LCK  ++ +A  LL+ M  R   P+  TY
Sbjct: 170 ALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITY 229

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + L+DG C   K+  A E+   M   GC  + V+YN L++G C+ + V +AL+L R+M  
Sbjct: 230 TILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTC 289

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           +G  P VVTY TL  GL ++ +V+ A  +  +M       D   YN  I+GLCK   + E
Sbjct: 290 RGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDE 349

Query: 245 AVELFRT-----------------LGILK------------------CELDIQAYNCLID 269
           ++ L R                   G+ +                  C  D+  Y+ LID
Sbjct: 350 SIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLID 409

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           GLCK+G+++ A +L+  +      ADVVTY+ +I GLC  G++D+AH L   M      P
Sbjct: 410 GLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPP 469

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           + + + +LI G   +N   + IEL+ +M+     P A   ++++
Sbjct: 470 STMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILI 513



 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 123/315 (39%), Positives = 184/315 (58%), Gaps = 5/315 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY T+IDGLCK G V  A A+   M  +   PD++ YN LI+GLC A+  +E+ 
Sbjct: 292 CTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESI 351

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L    +  G++P VVT++ ++  LC++ ++DEA RLL  +  R   P+   YSTL+DG 
Sbjct: 352 ALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGL 411

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK++ A +L+  M   GC  D V+Y+ LI+G CK   V+EA  L   MV  G  P+ 
Sbjct: 412 CKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPST 471

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF-- 249
           +TYN+L  GL +++ ++ A++L EEM+R + A    TYN  I G+C+   +  AV L   
Sbjct: 472 MTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQ 531

Query: 250 ---RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
              R +      LD  AY+ LIDGLCK+GR+  AL+ F+ +    ++ D +TY+I++ GL
Sbjct: 532 AKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGL 591

Query: 307 CNDGQMDKAHDLFLD 321
                + +   L LD
Sbjct: 592 KKSKDLHELRHLVLD 606



 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 200/370 (54%), Gaps = 7/370 (1%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +C+P+  TY  ++ G C+ G +D+A+  F +M+ +N+ P+V   + LI GLC A    +A
Sbjct: 4   ICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDA 63

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            R F  M   G+    V +  ++  L K  ++D+A  +L  M      PN  TY++L+DG
Sbjct: 64  LRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK----- 185
            C   + +RA+ELF  M+S+ C    V+YN L++G  +  ++E A++L++EM+ +     
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDM 183

Query: 186 --GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
                P V+TY+ L  GL + ++V  A++L E M+    + D  TY   +DGLCK   + 
Sbjct: 184 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 243

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
            A E+ R +    C  ++  YN L+ GLC++ R+  AL L R +  R    +VVTY  +I
Sbjct: 244 AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 303

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            GLC  G++  A  +  DM +    P+++I+  LI+G  + ++  + I LL +     + 
Sbjct: 304 DGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIK 363

Query: 364 PDASIVSMVV 373
           PD    S V+
Sbjct: 364 PDVVTYSSVI 373



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/370 (33%), Positives = 199/370 (53%), Gaps = 5/370 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY  ++DGLCKE  V  A  +  +M      P++VTYNSL+HGLC A   ++A 
Sbjct: 222 CSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDAL 281

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +M  +G  P+VVT+  ++D LCK G++ +A  +L  M+ +   P+   Y+ L++G 
Sbjct: 282 ALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGL 341

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +++ +  L     S G K D V+Y+ +I G C++  ++EA  L   + S+G  P V
Sbjct: 342 CKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDV 401

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           + Y+TL  GL +  +V+ A  L+E M  D   AD  TY+T IDGLCK G + EA  L   
Sbjct: 402 ILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLAR 461

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +        YN LI GLC    L+ A+EL   + R       VTYNI+IHG+C   +
Sbjct: 462 MVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMER 521

Query: 312 MDKAHDLFLDMEENAVAP-----NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +D A  L    +   VA      + I + +LI G  +  + ++ ++   +M +  V+PD 
Sbjct: 522 VDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDH 581

Query: 367 SIVSMVVDLL 376
              S++++ L
Sbjct: 582 ITYSILLEGL 591



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/370 (32%), Positives = 193/370 (52%), Gaps = 7/370 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN    + +IDGLCK      A   F  M+G  I  D V Y +L+ GL      ++A  +
Sbjct: 42  PNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAI 101

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM D G +P+VVT+N ++D LCKN + D A  L + M   +  P+  TY+TL+DG   
Sbjct: 102 LHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFR 161

Query: 134 TGKINRAEELFGSMESMG-------CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           TGK+ RA  LF  M           C  + ++Y++LI+G CK   V +A+ L   M ++G
Sbjct: 162 TGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARG 221

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
             P V+TY  L  GL +  +V  A ++  EM       +  TYN+ + GLC+   + +A+
Sbjct: 222 CSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDAL 281

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            L R +    C  ++  Y  LIDGLCK GR++ A  +   +  +    D++ YN++I+GL
Sbjct: 282 ALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGL 341

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C   Q+D++  L        + P+V+ + ++I+G  R N+  +   LL  +K +   PD 
Sbjct: 342 CKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDV 401

Query: 367 SIVSMVVDLL 376
            + S ++D L
Sbjct: 402 ILYSTLIDGL 411



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 123/356 (34%), Positives = 192/356 (53%), Gaps = 8/356 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYN+++ GLC+   V  A AL   M      P+VVTY +LI GLC      +A 
Sbjct: 257 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 316

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  +M+D+G  P ++ +N++++ LCK  ++DE+  LL   V   ++P+  TYS+++ G 
Sbjct: 317 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL 376

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C + +++ A  L   ++S GC  D + Y+ LI+G CK  +V+EA  LY  M   G    V
Sbjct: 377 CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADV 436

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+TL  GL +  +V+ A  L   M R      T TYN+ I GLC   ++ EA+EL   
Sbjct: 437 VTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEE 496

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA-----DVVTYNIMIHGL 306
           +    C      YN LI G+C+  R++ A+ L      R + A     D + Y+ +I GL
Sbjct: 497 MERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGL 556

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           C  G++ +A D F +M +N V P+ I +  L+ G   + K   + EL H + ++ V
Sbjct: 557 CKAGRVAEALDYFQEMIDNGVIPDHITYSILLEG---LKKSKDLHELRHLVLDQMV 609



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 77/152 (50%)

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           D  TY   + G C+ G I +A   F  +       ++   + LIDGLCK+ R   AL  F
Sbjct: 8   DVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCF 67

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
           R++    +VAD V Y  ++ GL  + ++D+A  +  +M ++   PNV+ + +LI G  + 
Sbjct: 68  RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKN 127

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           N+P +  EL   MK  +  P     + ++D L
Sbjct: 128 NEPDRAQELFEHMKSVECSPSMVTYNTLLDGL 159



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 60/120 (50%)

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
           C+ D+  Y  L+ G C+ G ++ A   F  +  + LV +V   +I+I GLC   +   A 
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             F  M+ + +  + +I+  L+ G  +  +  + + +LH+M++    P+    + ++D L
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 40/66 (60%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +T+ Y+++IDGLCK G V +A   F +M    + PD +TY+ L+ GL  + D +E + L 
Sbjct: 545 DTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLV 604

Query: 75  FEMMDQ 80
            + M Q
Sbjct: 605 LDQMVQ 610


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  256 bits (654), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 127/364 (34%), Positives = 218/364 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V+Y+T+I  LCK G V+ A   F QM  E ++P+++++ SLIHGLC   +W + + 
Sbjct: 407 RPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEE 466

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L FEM+++G+ P  +  N IMD LCK G++ EA    D+++   V+P+  +Y+TL+DG+C
Sbjct: 467 LAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYC 526

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK++ + +    M S+G + D  +YN L+NGY KN  VE+AL+LYREM  K +K   +
Sbjct: 527 FVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAI 586

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T N +  GLF+  ++  A +L+ +M          TYNT + GLC+N  + EA+ +F  L
Sbjct: 587 TSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDL 646

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + ELD++ ++ +I+ L K GR++ A  LF ++  R  V DV+TY++MI     +G +
Sbjct: 647 RSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLL 706

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +++ +LFL ME+N  A +  +   ++   +      +    L K+ EK    +AS  +++
Sbjct: 707 EESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALL 766

Query: 373 VDLL 376
           + ++
Sbjct: 767 IPIV 770



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/358 (34%), Positives = 190/358 (53%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C PN V+YNT+IDG  KEG VDKA  LF +M G+ + PDVVTYNSLI GLC A   +
Sbjct: 193 GYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMD 252

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  +   M D+GV P   T+N+++   C  G+++EA RLL  M    ++P+  TYS L+
Sbjct: 253 KAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLI 312

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
             +C  G+   A  +F SM   G K +   Y+IL++GY     + +   L   M+  GI 
Sbjct: 313 QYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIP 372

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
                +N L     +   V+ A+  F EM+++ +  D  +Y+T I  LCK G + +AV  
Sbjct: 373 FEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYH 432

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +       +I ++  LI GLC  G  +   EL   +  R +  D +  N ++  LC 
Sbjct: 433 FNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCK 492

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +G++ +A D F  +    V P+V+ + TLI G+  + K  + I+ L +M    + PD+
Sbjct: 493 EGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDS 550



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 190/366 (51%), Gaps = 4/366 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKA-KALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           +   VT N +I GLC     D A   +F +M      PDV +YN+LI GLC      EA 
Sbjct: 123 RVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEAL 182

Query: 72  RLFFEMMDQG---VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            L   M   G     P+VV++N ++D   K G++D+A  L   M+ + + P+  TY++L+
Sbjct: 183 ELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLI 242

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C    +++A  +   M   G   D  +YNI+I GYC   ++EEA+ L ++M   G++
Sbjct: 243 DGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQ 302

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTY+ L     +I +   A  +F+ M R     +++ Y+  + G    G +++  +L
Sbjct: 303 PDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDL 362

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +       + +A+N LI    K G ++ A+  F  + +  L  DVV+Y+ +IH LC 
Sbjct: 363 LDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCK 422

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G+++ A   F  M    ++PN+I F +LIHG   I +  KV EL  +M  + + PDA  
Sbjct: 423 TGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIF 482

Query: 369 VSMVVD 374
           ++ ++D
Sbjct: 483 MNTIMD 488



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 185/364 (50%), Gaps = 3/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMK---GENINPDVVTYNSLIHGLCHANDWNEA 70
           P+  +YN +I GLC E    +A  L + M    G N +P+VV+YN++I G     + ++A
Sbjct: 160 PDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKA 219

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             LF EMM QG+ P VVT+N ++D LCK   MD+A  +L  M  + V P+  TY+ ++ G
Sbjct: 220 YFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRG 279

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +C  G++  A  L   M   G + D V+Y++LI  YCK     EA S++  MV KG KP 
Sbjct: 280 YCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPN 339

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
              Y+ L  G      +     L + M RD +  +   +N  I    K+G + +A+  F 
Sbjct: 340 STIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFT 399

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +       D+ +Y+ +I  LCK+GR+E A+  F  +    L  +++++  +IHGLC+ G
Sbjct: 400 EMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIG 459

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +  K  +L  +M    + P+ I   T++    +  +  +  +    +    V PD    +
Sbjct: 460 EWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYN 519

Query: 371 MVVD 374
            ++D
Sbjct: 520 TLID 523



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 163/349 (46%), Gaps = 10/349 (2%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
           A +LF  M    +N        LI   C     + A   F   +  G +   VT N ++ 
Sbjct: 75  AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134

Query: 95  ELCKNGKMDEASRLLDLMVQR----DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
            LC   + D+A   +D++ +R       P+ F+Y+ L+ G C+  K   A EL   M + 
Sbjct: 135 GLCDGNRTDDA---MDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTAD 191

Query: 151 G---CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
           G   C  + VSYN +I+G+ K  EV++A  L+ EM+ +G+ P VVTYN+L  GL +   +
Sbjct: 192 GGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAM 251

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
           + A+ + + M    V  DT TYN  I G C  G + EAV L + +     + D+  Y+ L
Sbjct: 252 DKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLL 311

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           I   CK GR   A  +F S+ R+    +   Y+I++HG    G +    DL   M  + +
Sbjct: 312 IQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGI 371

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                 F  LI  + +     K +    +M++  + PD    S V+ +L
Sbjct: 372 PFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHIL 420



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 124/238 (52%), Gaps = 2/238 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           IGV  KP+ V+YNT+IDG C  G +D++     +M    + PD  TYNSL++G       
Sbjct: 509 IGV--KPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRV 566

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            +A  L+ EM  + V+   +T N+++  L + G++  A  L   MV R  +    TY+T+
Sbjct: 567 EDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTV 626

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G C    ++ A  +F  + S   + D  +++I+IN   K   ++EA SL+  MV +G 
Sbjct: 627 LGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGP 686

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            P V+TY+ +     E   +E +  LF  M+++  AAD+   N  +  L + G +  A
Sbjct: 687 VPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRA 744



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 121/234 (51%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + +  +P++ TYN++++G  K G V+ A AL+ +M  +++    +T N ++HGL  A   
Sbjct: 542 VSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRI 601

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A+ L+ +M+D+G Q  + T+N ++  LC+N  +DEA R+ + +  ++   +  T+S +
Sbjct: 602 VAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIV 661

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++     G+I+ A+ LF +M   G   D ++Y+++I  + +   +EE+ +L+  M   G 
Sbjct: 662 INALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGC 721

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
                  N +   L E   V  A     ++   + + + ST    I  + +  Y
Sbjct: 722 AADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLIPIVSEKKY 775


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  256 bits (654), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 134/368 (36%), Positives = 213/368 (57%), Gaps = 3/368 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYN ++D LCK   V  A+ +  +M      P+V+T+NSL+ G C   + ++A+
Sbjct: 210 CPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDAR 269

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M+ +G++P+VVT++ ++D LCK+ K  EA  +L+ M  R V P+AFTYS L+ G 
Sbjct: 270 KLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGL 329

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   KI  AE++   M   GC  D V Y+ +I+ +CK+ ++ EA    +EM  +   P V
Sbjct: 330 CKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDV 389

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VTYNT+  GL ++ ++  A  + E+MQ   DV  D  TY+T I+GLCK+  +VEA +L  
Sbjct: 390 VTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLD 449

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C  D+  Y  +IDGLCK GRLE A  L + + R     +VVTY  +I GLC   
Sbjct: 450 RMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKAR 509

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV--MPDASI 368
           ++D+A  +  +M      PN++ + T+++G     +  +  +L+ +MK+ +    PDA+ 
Sbjct: 510 KVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAAT 569

Query: 369 VSMVVDLL 376
              +V+ L
Sbjct: 570 YRTIVNAL 577



 Score =  203 bits (517), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 193/392 (49%), Gaps = 33/392 (8%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPD---------------- 50
           E+   C+P+  +YN +I G C  G +  A  L  +MK     PD                
Sbjct: 103 ELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGD 162

Query: 51  ----------------VVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
                           VVTY +LI     A    EA +L  EM ++G  P++VT+NV++D
Sbjct: 163 LDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVD 222

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            LCK   +  A  ++  M++    PN  T+++L+DGFC  G ++ A +L G M + G + 
Sbjct: 223 ALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRP 282

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           + V+Y+ LI+G CK+++  EA  +  EM ++G+ P   TY+ L  GL +  ++E A ++ 
Sbjct: 283 NVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQML 342

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
             M       D   Y++ I   CK+G ++EA +  + +   +   D+  YN +IDGLCK 
Sbjct: 343 RRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKL 402

Query: 275 GRLEIALELFRSLPRRV-LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           G++  A  +   +     ++ DVVTY+ +I+GLC    + +A  L   M +    P+V+ 
Sbjct: 403 GKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVT 462

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + T+I G  +  +  +   LL  MK     P+
Sbjct: 463 YTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPN 494



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 101/277 (36%), Positives = 156/277 (56%), Gaps = 3/277 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY+ +I GLCK   +++A+ +  +M G    PDVV Y+S+IH  C +    EA++ 
Sbjct: 317 PDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKT 376

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR-DVRPNAFTYSTLMDGFC 132
             EM  Q   P VVT+N ++D LCK GK+ EA  +L+ M +  DV P+  TYST+++G C
Sbjct: 377 LQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLC 436

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +  +  A++L   M   GC  D V+Y  +I+G CK   +EEA  L + M   G  P VV
Sbjct: 437 KSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVV 496

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  GL +  +V+ A ++ EEM+      +  TYNT ++GLC +G I EA +L + +
Sbjct: 497 TYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 556

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
             G  +C  D   Y  +++ L  S  ++ A +L   +
Sbjct: 557 KDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 197/392 (50%), Gaps = 33/392 (8%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++N+++  L +     +A  LF      +  PDV +YN +I G C+A D + A  L  EM
Sbjct: 79  SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138

Query: 78  ----------------------------MDQ----GVQPSVVTFNVIMDELCKNGKMDEA 105
                                       MD     G  P+VVT+  ++    +  K++EA
Sbjct: 139 KSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEA 198

Query: 106 SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILING 165
            +LL+ M +R   PN  TY+ L+D  C    +  A+++   M   G   + +++N L++G
Sbjct: 199 MKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDG 258

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
           +CK   V++A  L   MV+KG++P VVTY+ L  GL +  +   A ++ EEM+   V  D
Sbjct: 259 FCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPD 318

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
             TY+  I GLCK   I EA ++ R +    C  D+  Y+ +I   CKSG+L  A +  +
Sbjct: 319 AFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQ 378

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA-VAPNVIIFVTLIHGFVRI 344
            + ++    DVVTYN +I GLC  G++ +A  +   M+E+  V P+V+ + T+I+G  + 
Sbjct: 379 EMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKS 438

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +   +  +LL +M +    PD    + ++D L
Sbjct: 439 DMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGL 470



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 88/247 (35%), Positives = 145/247 (58%), Gaps = 3/247 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C P+ V Y++II   CK G + +A+    +M+ +  +PDVVTYN++I GLC      
Sbjct: 347 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 406

Query: 69  EAKRLFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           EA+ +  +M + G V P VVT++ +++ LCK+  + EA +LLD M +    P+  TY+T+
Sbjct: 407 EAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 466

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DG C  G++  AE L   M+  GC  + V+Y  LI+G CK ++V+EA  +  EM + G 
Sbjct: 467 IDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGC 526

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ--RDDVAADTSTYNTFIDGLCKNGYIVEA 245
            P +VTYNT+  GL    +++ A +L + M+  R + + D +TY T ++ L  +  + EA
Sbjct: 527 PPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEA 586

Query: 246 VELFRTL 252
            +L   +
Sbjct: 587 EQLLEQM 593



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 123/208 (59%), Gaps = 3/208 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMK-GENINPDVVTYNSLIHGLCHANDWNEAKR 72
           P+ VTYNT+IDGLCK G + +A+ +  QM+   ++ PDVVTY+++I+GLC ++   EA++
Sbjct: 387 PDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQK 446

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M   G  P VVT+  I+D LCK G+++EA  LL  M +    PN  TY+TL+ G C
Sbjct: 447 LLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLC 506

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK--PT 190
              K++ AE +   M + GC  + V+YN ++NG C +  ++EA  L + M     +  P 
Sbjct: 507 KARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPD 566

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
             TY T+   L     V+ A +L E+M+
Sbjct: 567 AATYRTIVNALMSSDLVQEAEQLLEQMK 594



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 139/324 (42%), Gaps = 67/324 (20%)

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
            AF++++L+       K   A +LF S     C+ D  SYNI+I+G+C   ++  AL L 
Sbjct: 76  TAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELL 135

Query: 180 REMVSKGIK--------------------------------PTVVTYNTLFLGLFEIHQV 207
            EM S G                                  P VVTY  L        ++
Sbjct: 136 EEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKL 195

Query: 208 EHALKLFEEMQR--------------------------DDV---------AADTSTYNTF 232
           E A+KL EEM+                            DV         A +  T+N+ 
Sbjct: 196 EEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSL 255

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           +DG CK G + +A +L   +       ++  Y+ LIDGLCKS +   A E+   +  R +
Sbjct: 256 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGV 315

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
             D  TY+ +IHGLC   ++++A  +   M  +   P+V+++ ++IH F +  K  +  +
Sbjct: 316 TPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQK 375

Query: 353 LLHKMKEKKVMPDASIVSMVVDLL 376
            L +M++++  PD    + V+D L
Sbjct: 376 TLQEMRKQRKSPDVVTYNTVIDGL 399



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 99/173 (57%), Gaps = 2/173 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY+T+I+GLCK   + +A+ L  +M     NPDVVTY ++I GLC      EA+ L
Sbjct: 423 PDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYL 482

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   G  P+VVT+  ++  LCK  K+DEA R+++ M      PN  TY+T+++G C+
Sbjct: 483 LQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCV 542

Query: 134 TGKINRAEELFGSME--SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           +G+I  A++L   M+     C  D  +Y  ++N    +  V+EA  L  +M S
Sbjct: 543 SGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595



 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 56/140 (40%), Positives = 88/140 (62%), Gaps = 2/140 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY TIIDGLCK G +++A+ L   MK     P+VVTY +LI GLC A   +EA+
Sbjct: 456 CNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAE 515

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV--QRDVRPNAFTYSTLMD 129
           R+  EM + G  P++VT+N +++ LC +G++ EA +L+  M   + +  P+A TY T+++
Sbjct: 516 RVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVN 575

Query: 130 GFCLTGKINRAEELFGSMES 149
               +  +  AE+L   M+S
Sbjct: 576 ALMSSDLVQEAEQLLEQMKS 595



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 3/226 (1%)

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G  H   S+N L+    + K+  EA  L+R  +    +P V +YN +  G      +  A
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           L+L EEM+    A D  T+   I  +   G +  A++  R++G   C+ ++  Y  LI  
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMG---CDPNVVTYTALIAA 188

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
             ++ +LE A++L   +  R    ++VTYN+++  LC    +  A D+   M E   APN
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           V+ F +L+ GF +        +LL  M  K + P+    S ++D L
Sbjct: 249 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGL 294


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 134/366 (36%), Positives = 209/366 (57%), Gaps = 1/366 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN +TY+ +IDGLCK   V +A  L   MK    +PDV+TY  L+ GLC  +    A 
Sbjct: 109 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 168

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  EM+D G  P++VT+N ++  LC+  ++ +A  L+  M  R   PN  TY TL+DG 
Sbjct: 169 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 228

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++  A  +   M   G   D + YN+LING CK  +V+E+++L R  VS GIKP V
Sbjct: 229 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 288

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+++  GL   ++++ A +L   ++      D   Y+T IDGLCK G + EA +L+  
Sbjct: 289 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEV 348

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ D+  Y+ LIDGLCK+GR++ A  L   + R       +TYN +I GLC+   
Sbjct: 349 MTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNH 408

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK-PSKVIELLHKMKEKKVMPDASIVS 370
           +D+A +L  +ME +  AP+ + +  LIHG  R+ +  S  ++   +M +  V+PD    S
Sbjct: 409 LDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYS 468

Query: 371 MVVDLL 376
           ++++ L
Sbjct: 469 ILLEGL 474



 Score =  244 bits (623), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 134/365 (36%), Positives = 201/365 (55%), Gaps = 2/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN VTYN++IDGLCK    D+A+ LF  MK    +P +VTYN+L+ GL        A 
Sbjct: 6   CEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAM 65

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+D+     V++FN+++  LC+ GK++ A      M  R   PN  TYS L+DG 
Sbjct: 66  ALFQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGL 123

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++++A EL  SM++ GC  D ++Y IL++G CK  +V  A  + REM+  G  P +
Sbjct: 124 CKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNL 183

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN+L  GL    +V  AL L  +M       +  TY T IDGLCK G + +A  +   
Sbjct: 184 VTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLAD 243

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D+  YN LI+GLCK+ +++ ++ L R      +  DVVTY+ +I+GLC   +
Sbjct: 244 MIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNR 303

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A  L L ++     P+VI++ TLI G  +  K  +  +L   M       D    S 
Sbjct: 304 LDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYST 363

Query: 372 VVDLL 376
           ++D L
Sbjct: 364 LIDGL 368



 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/399 (33%), Positives = 211/399 (52%), Gaps = 37/399 (9%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           V C P+ VTYNT++DGL + G +++A ALF +M  +  + DV+++N L+ GLC A     
Sbjct: 39  VECSPSMVTYNTLLDGLFRTGKLERAMALFQEML-DRRSHDVISFNILVTGLCRAGKIET 97

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A   FF  MD    P+V+T++V++D LCK  ++ +A  LL+ M  R   P+  TY+ L+D
Sbjct: 98  ALE-FFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVD 156

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C   K+  A E+   M   GC  + V+YN L++G C+ + V +AL+L R+M  +G  P
Sbjct: 157 GLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTP 216

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VVTY TL  GL ++ +V+ A  +  +M       D   YN  I+GLCK   + E++ L 
Sbjct: 217 NVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALL 276

Query: 250 RT-----------------LGILK------------------CELDIQAYNCLIDGLCKS 274
           R                   G+ +                  C  D+  Y+ LIDGLCK+
Sbjct: 277 RRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKA 336

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G+++ A +L+  +      ADVVTY+ +I GLC  G++D+AH L   M      P+ + +
Sbjct: 337 GKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTY 396

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            +LI G   +N   + IEL+ +M+     P A   ++++
Sbjct: 397 NSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILI 435



 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 105/297 (35%), Positives = 164/297 (55%), Gaps = 2/297 (0%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M D G +P+VVT+N ++D LCKN + D A  L + M   +  P+  TY+TL+DG   TGK
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           + RA  LF  M      HD +S+NIL+ G C+  ++E AL  +R+M  +   P V+TY+ 
Sbjct: 61  LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSV 118

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  GL + ++V  A++L E M+    + D  TY   +DGLCK   +  A E+ R +    
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
           C  ++  YN L+ GLC++ R+  AL L R +  R    +VVTY  +I GLC  G++  A 
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            +  DM +    P+++I+  LI+G  + ++  + I LL +     + PD    S V+
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 295



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 95/264 (35%), Positives = 140/264 (53%), Gaps = 36/264 (13%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY T+IDGLCK G V  A A+   M  +   PD++ YN LI+GLC A+  +E+ 
Sbjct: 214 CTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESI 273

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L    +  G++P VVT++ ++  LC++ ++DEA RLL  +  R   P+   YSTL+DG 
Sbjct: 274 ALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGL 333

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK++ A +L+  M   GC  D V+Y+ LI+G CK   V+EA  L   MV  G  P+ 
Sbjct: 334 CKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPST 393

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI------------------ 233
           +TYN+L  GL +++ ++ A++L EEM+R + A    TYN  I                  
Sbjct: 394 MTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQ 453

Query: 234 ------------------DGLCKN 239
                             +GL K+
Sbjct: 454 EMIDNGVIPDHITYSILLEGLKKS 477



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 131/230 (56%), Gaps = 2/230 (0%)

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M   GC+ + V+YN LI+G CKN E + A  L+  M S    P++VTYNTL  GLF   +
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           +E A+ LF+EM  D  + D  ++N  + GLC+ G I  A+E FR +   +C  ++  Y+ 
Sbjct: 61  LERAMALFQEML-DRRSHDVISFNILVTGLCRAGKIETALEFFRKMDD-RCSPNVITYSV 118

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LIDGLCK+ R+  A+EL  S+  R    DV+TY I++ GLC + ++  A ++  +M +  
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             PN++ + +L+HG  R  + S  + L+  M  +   P+      ++D L
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 228



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 119/201 (59%), Gaps = 4/201 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY+++I GLC+   +D+A  L L +K     PDV+ Y++LI GLC A   +EA  
Sbjct: 285 KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFD 344

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L+  M   G    VVT++ ++D LCK G++DEA  LL  MV+    P+  TY++L+ G C
Sbjct: 345 LYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLC 404

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA-LSLYREMVSKGIKPTV 191
               ++ A EL   ME   C    V+YNILI+G C+ + V+ A L  ++EM+  G+ P  
Sbjct: 405 DLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDH 464

Query: 192 VTYNTLFLGL---FEIHQVEH 209
           +TY+ L  GL    ++H++ H
Sbjct: 465 ITYSILLEGLKKSKDLHELRH 485



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 2/107 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T+TYN++I GLC    +D+A  L  +M+  N  P  VTYN LIHG+C     + A   
Sbjct: 391 PSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALD 450

Query: 74  FF-EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL-LDLMVQRDVR 118
           +F EM+D GV P  +T++++++ L K+  + E   L LD MVQ   R
Sbjct: 451 YFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLGYR 497


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 132/349 (37%), Positives = 206/349 (59%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + +P+ V YNTIIDG+CK+  V+ A  L+ +   + I PDV TYN+LI G C      
Sbjct: 326 GKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLK 385

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  LF +M  + + P V TF++++D  CK+G + EA  +L +M+++ ++P+  TYS+LM
Sbjct: 386 DAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLM 445

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+CL  ++N+AE +F +M   G   +  SYNI+ING+CK K V+EA+ L++EM  K I 
Sbjct: 446 DGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIF 505

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P V+TY++L  GL +  ++ +AL+L +EM       D  TYN+ +D LCK  ++ +A+ L
Sbjct: 506 PDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITL 565

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              L       D+  Y  L+ GLC+SG+LE A ++F  L  +    DV  Y +MI G C+
Sbjct: 566 LTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCD 625

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            G  D+A  L   MEEN   P+   +  +I      ++     +LL +M
Sbjct: 626 KGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREM 674



 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 121/359 (33%), Positives = 198/359 (55%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + V+Y T+I+GLCK G    A  L  +  G+ + PDVV YN++I G+C     N+A  L+
Sbjct: 297 DQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLY 356

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            E + + + P V T+N ++   C  GK+ +A  L + M  +++ P+ +T+S L+DGFC  
Sbjct: 357 SEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKD 416

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G I  A+ +   M     K D V+Y+ L++GYC   EV +A S++  M  +G+   V +Y
Sbjct: 417 GNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSY 476

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N +  G  +I  V+ A+KLF+EM    +  D  TY++ IDGLCK+G I  A+EL   +  
Sbjct: 477 NIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHY 536

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + DI  YN ++D LCK   ++ A+ L   L  + +  D+ TY I++ GLC  G+++ 
Sbjct: 537 RGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLED 596

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A  +F D+       +V  +  +I GF       + + LL KM+E   +PDA    +++
Sbjct: 597 ARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIII 655



 Score =  173 bits (439), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 158/280 (56%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T++ ++DG CK+G + +AK +   M  ++I PDVVTY+SL+ G C  N+ N+A+ +
Sbjct: 401 PDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESI 460

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M  +GV  +V ++N++++  CK   +DEA +L   M  + + P+  TYS+L+DG C 
Sbjct: 461 FNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCK 520

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G+I+ A EL   M   G + D ++YN +++  CK   V++A++L  ++  +GI+P + T
Sbjct: 521 SGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNT 580

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +  ++E A K+FE++       D   Y   I G C  G   EA+ L   + 
Sbjct: 581 YTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKME 640

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
              C  D + Y  +I  L +    ++A +L R +  R L+
Sbjct: 641 ENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 680



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 156/301 (51%)

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
           +++  G +P  +T    +   C  G++ +A    D ++      +  +Y TL++G C  G
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           +   A EL    +    + D V YN +I+G CK+K V +A  LY E VSK I P V TYN
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
            L  G   + +++ A+ LF +M   ++  D  T++  +DG CK+G I EA  +   +   
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
             + D+  Y+ L+DG C    +  A  +F ++  R + A+V +YNIMI+G C    +D+A
Sbjct: 433 SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEA 492

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
             LF +M    + P+VI + +LI G  +  + S  +EL+ +M  +   PD    + ++D 
Sbjct: 493 MKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDA 552

Query: 376 L 376
           L
Sbjct: 553 L 553



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 171/325 (52%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           PD +T  + I G C     ++A     +++  G     V++  +++ LCK G+   A  L
Sbjct: 261 PDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALEL 320

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
           L     + V+P+   Y+T++DG C    +N A +L+    S     D  +YN LI+G+C 
Sbjct: 321 LRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCI 380

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             ++++A+ L+ +M SK I P V T++ L  G  +   ++ A  +   M +  +  D  T
Sbjct: 381 VGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVT 440

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           Y++ +DG C    + +A  +F T+       ++Q+YN +I+G CK   ++ A++LF+ + 
Sbjct: 441 YSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMH 500

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
            + +  DV+TY+ +I GLC  G++  A +L  +M      P++I + +++    + +   
Sbjct: 501 HKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVD 560

Query: 349 KVIELLHKMKEKKVMPDASIVSMVV 373
           K I LL K+K + + PD +  +++V
Sbjct: 561 KAITLLTKLKGQGIRPDMNTYTILV 585



 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 84/154 (54%), Gaps = 3/154 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ +TYN+I+D LCK+  VDKA  L  ++KG+ I PD+ TY  L+ GLC +    +A++
Sbjct: 540 QPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARK 599

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +++ +G    V  + V++   C  G  DEA  LL  M +    P+A TY  ++    
Sbjct: 600 VFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLF 659

Query: 133 LTGKINRAEELFGSMESMG---CKHDDVSYNILI 163
              + + AE+L   M   G      DD+  +IL+
Sbjct: 660 EKDENDMAEKLLREMIMRGLLVALTDDLVASILV 693



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 70/321 (21%), Positives = 110/321 (34%), Gaps = 85/321 (26%)

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           N A  LF  +        D+ +  ++    K+K     LSL ++M  KGIK   +  N L
Sbjct: 92  NDAVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNIL 151

Query: 198 F-----LGLFE---------IHQVEHALKLFEEMQRDDVAA------------------- 224
                 LGL           ++ +E     F+    +D                      
Sbjct: 152 INSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDF 211

Query: 225 -DTSTYN-------------TFIDGLCKNGYIVEAVELFRTLGILK--CELDIQAYNCLI 268
             +  +N             TFI   C       ++E +    ILK   E D       I
Sbjct: 212 LQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIE-YTPPKILKNGYEPDTITLTTFI 270

Query: 269 DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC--------------NDGQM-- 312
            G C  G++  AL     +       D V+Y  +I+GLC              NDG++  
Sbjct: 271 KGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQ 330

Query: 313 -------------------DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
                              + A DL+ +     + P+V  +  LI GF  + K    I+L
Sbjct: 331 PDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDL 390

Query: 354 LHKMKEKKVMPDASIVSMVVD 374
            +KM  K ++PD    S++VD
Sbjct: 391 FNKMTSKNIIPDVYTFSILVD 411


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 135/351 (38%), Positives = 206/351 (58%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V Y+ IID LCK+  VD+A  L+ +M G+ I+PDVVTY+ L+ G C     N A  
Sbjct: 195 RPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAID 254

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+ + + P + T+ +++D LCK GK+ EA  +L +MV+  V  +   YSTLMDG+C
Sbjct: 255 LLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYC 314

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L  ++N A+ +F +M  MG   D   Y+I+ING CK K V+EAL+L+ E+  K + P  V
Sbjct: 315 LVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTV 374

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY +L   L +  ++ +   LF+EM       D  TYN  ID LCKNG++  A+ LF  +
Sbjct: 375 TYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKM 434

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++  +  L+DGLCK GRL+ ALE F+ L  +    +V TY +MI+GLC +G +
Sbjct: 435 KDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLL 494

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           D+A  L   ME+N    + + F  +I  F   ++  K  +L+ +M  + ++
Sbjct: 495 DEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/348 (34%), Positives = 188/348 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PNT+T NT++ GLC EG V +A     ++  +      ++Y  LI+G+C   +   A R
Sbjct: 125 QPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIR 184

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   +    ++P+VV +++I+D LCK+  +DEA  L   MV + + P+  TYS L+ GFC
Sbjct: 185 LLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFC 244

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + G++NRA +L   M       D  +Y IL++  CK  +V+EA ++   MV   +   VV
Sbjct: 245 IVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVV 304

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+TL  G   +++V +A ++F  M +  V  D   Y+  I+GLCK   + EA+ LF  +
Sbjct: 305 VYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEI 364

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D   Y  LID LCKSGR+    +LF  +  R    DV+TYN +I  LC +G +
Sbjct: 365 HQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHL 424

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           D+A  LF  M++ A+ PNV  F  L+ G  ++ +    +E    +  K
Sbjct: 425 DRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTK 472



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 195/357 (54%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           ++Y  +I+G+CK G    A  L  +++  +I P+VV Y+ +I  LC     +EA  L+ E
Sbjct: 164 ISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTE 223

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+ +G+ P VVT+++++   C  G+++ A  LL+ MV  ++ P+ +TY+ L+D  C  GK
Sbjct: 224 MVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGK 283

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +  AE +   M       D V Y+ L++GYC   EV  A  ++  M   G+ P V  Y+ 
Sbjct: 284 VKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSI 343

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  GL +I +V+ AL LFEE+ + ++  DT TY + ID LCK+G I    +LF  +    
Sbjct: 344 MINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRG 403

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              D+  YN LID LCK+G L+ A+ LF  +  + +  +V T+ I++ GLC  G++  A 
Sbjct: 404 QPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNAL 463

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           + F D+       NV  +  +I+G  +     + + L  +M++   + DA    +++
Sbjct: 464 EFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMI 520



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 190/396 (47%), Gaps = 35/396 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T  +N I+  L        A +L+ QM+   + PD  T N +I+  CH      A   
Sbjct: 56  PHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSG 115

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G QP+ +T N +M  LC  GK+ EA R  D ++ +  R +  +Y  L++G C 
Sbjct: 116 VSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCK 175

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A  L   +E    + + V Y+++I+  CK+  V+EA  LY EMV KGI P VVT
Sbjct: 176 IGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVT 235

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE--------- 244
           Y+ L  G   + Q+  A+ L  EM  +++  D  TY   +D LCK G + E         
Sbjct: 236 YSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMV 295

Query: 245 --------------------------AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                                     A  +F T+  +    D+  Y+ +I+GLCK  R++
Sbjct: 296 KACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVD 355

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            AL LF  + ++ +V D VTY  +I  LC  G++    DLF +M +    P+VI +  LI
Sbjct: 356 EALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLI 415

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
               +     + I L +KMK++ + P+    ++++D
Sbjct: 416 DALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLD 451



 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 163/315 (51%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G    P+ VTY+ ++ G C  G +++A  L  +M  ENINPD+ TY  L+  LC     
Sbjct: 225 VGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKV 284

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA+ +   M+   V   VV ++ +MD  C   +++ A R+   M Q  V P+   YS +
Sbjct: 285 KEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIM 344

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++G C   +++ A  LF  +       D V+Y  LI+  CK+  +     L+ EM+ +G 
Sbjct: 345 INGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQ 404

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P V+TYN L   L +   ++ A+ LF +M+   +  +  T+   +DGLCK G +  A+E
Sbjct: 405 PPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALE 464

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            F+ L      L+++ Y  +I+GLCK G L+ AL L   +     ++D VT+ IMI    
Sbjct: 465 FFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFF 524

Query: 308 NDGQMDKAHDLFLDM 322
           +  + DKA  L  +M
Sbjct: 525 DKDENDKAEKLVREM 539


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  254 bits (650), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 140/367 (38%), Positives = 214/367 (58%), Gaps = 9/367 (2%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M N   E+G+  KP+ V Y TIID LCK G V+ A +LF QM+   I PDVV Y SL++G
Sbjct: 164 MVNQMVEMGI--KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           LC++  W +A  L   M  + ++P V+TFN ++D   K GK  +A  L + M++  + PN
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
            FTY++L++GFC+ G ++ A ++F  ME+ GC  D V+Y  LING+CK K+V++A+ ++ 
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           EM  KG+    +TY TL  G  ++ +   A ++F  M    V  +  TYN  +  LC NG
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401

Query: 241 YIVEAVELFRTLGILKCELD-----IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
            + +A+ +F  +   K E+D     I  YN L+ GLC +G+LE AL +F  + +R +   
Sbjct: 402 KVKKALMIFEDMQ--KREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIG 459

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           ++TY I+I G+C  G++  A +LF  +    V PNV+ + T+I G  R     +   L  
Sbjct: 460 IITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFR 519

Query: 356 KMKEKKV 362
           KMKE  V
Sbjct: 520 KMKEDGV 526



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 199/367 (54%), Gaps = 3/367 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT+ ++I+G C    +++A ++  QM    I PDVV Y ++I  LC     N A  
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF +M + G++P VV +  +++ LC +G+  +A  LL  M +R ++P+  T++ L+D F 
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK   AEEL+  M  M    +  +Y  LING+C    V+EA  ++  M +KG  P VV
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y +L  G  +  +V+ A+K+F EM +  +  +T TY T I G  + G    A E+F  +
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL---VADVVTYNIMIHGLCND 309
                  +I+ YN L+  LC +G+++ AL +F  + +R +     ++ TYN+++HGLC +
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G+++KA  +F DM +  +   +I +  +I G  +  K    + L   +  K V P+    
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTY 498

Query: 370 SMVVDLL 376
           + ++  L
Sbjct: 499 TTMISGL 505



 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 181/349 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + +  +++ + K    D    L   ++   ++ D+ T N L++  C ++    A   
Sbjct: 70  PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +MM  G +P +VTF  +++  C   +M+EA  +++ MV+  ++P+   Y+T++D  C 
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +N A  LF  ME+ G + D V Y  L+NG C +    +A SL R M  + IKP V+T
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L     +  +   A +L+ EM R  +A +  TY + I+G C  G + EA ++F  + 
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D+ AY  LI+G CK  +++ A+++F  + ++ L  + +TY  +I G    G+ +
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
            A ++F  M    V PN+  +  L+H      K  K + +   M+++++
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 163/307 (53%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           Y  ++    H+  +NEA  LF  M++    PS++ F  +++ + K  K D    L D + 
Sbjct: 40  YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
              V  + +T + LM+ FC + +   A    G M  +G + D V++  LING+C    +E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           EA+S+  +MV  GIKP VV Y T+   L +   V +AL LF++M+   +  D   Y + +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
           +GLC +G   +A  L R +   K + D+  +N LID   K G+   A EL+  + R  + 
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            ++ TY  +I+G C +G +D+A  +F  ME     P+V+ + +LI+GF +  K    +++
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339

Query: 354 LHKMKEK 360
            ++M +K
Sbjct: 340 FYEMSQK 346



 Score =  167 bits (423), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 170/344 (49%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
           ++A  LF  M      P ++ +  L++ +     ++    L   +   GV   + T N++
Sbjct: 54  NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           M+  C++ +   AS  L  M++    P+  T+++L++GFCL  ++  A  +   M  MG 
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
           K D V Y  +I+  CKN  V  ALSL+ +M + GI+P VV Y +L  GL    +   A  
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           L   M +  +  D  T+N  ID   K G  ++A EL+  +  +    +I  Y  LI+G C
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
             G ++ A ++F  +  +    DVV Y  +I+G C   ++D A  +F +M +  +  N I
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            + TLI GF ++ KP+   E+   M  + V P+    ++++  L
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 144/284 (50%), Gaps = 4/284 (1%)

Query: 95  ELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
           E+ +NG    + +EA  L   MV+    P+   ++ L++      K +    L   ++ M
Sbjct: 42  EILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G  HD  + N+L+N +C++ +   A S   +M+  G +P +VT+ +L  G    +++E A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           + +  +M    +  D   Y T ID LCKNG++  A+ LF  +       D+  Y  L++G
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LC SGR   A  L R + +R +  DV+T+N +I     +G+   A +L+ +M   ++APN
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +  + +LI+GF       +  ++ + M+ K   PD    + +++
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLIN 325



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 24/274 (8%)

Query: 105 ASRLLDLMVQRDVRPN---AFTYSTLMD-GFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           A R   L   R V+ N   A ++S L+D  F +    N  E L   + S+          
Sbjct: 2   AMRFFQLHRNRLVKGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSL---------- 51

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
                     +  EAL L+  MV     P+++ +  L   + ++ + +  + L + +Q  
Sbjct: 52  ----------QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            V+ D  T N  ++  C++     A      +  L  E DI  +  LI+G C   R+E A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           + +   +    +  DVV Y  +I  LC +G ++ A  LF  ME   + P+V+++ +L++G
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
                +      LL  M ++K+ PD    + ++D
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  253 bits (647), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 143/367 (38%), Positives = 207/367 (56%), Gaps = 4/367 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC-HANDWNEAKR 72
           PN V YN I+DGLCK G V +A  L  +M   N+ P+VVTYN LI GLC     W E   
Sbjct: 213 PNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVG 272

Query: 73  LFFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           LF EM+ ++G+ P V TF++++D  CK G +  A  ++  MV+  V PN  TY++L+ G+
Sbjct: 273 LFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGY 332

Query: 132 CLTGKINRAEELFGSM--ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           CL  ++  A  +FG M  E  GC    V++N LI+G+CK KEV++A+SL  EMV KG+ P
Sbjct: 333 CLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDP 392

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V T+ +L  G  E+ +   A +LF  M+      +  T    +DGL K     EAV LF
Sbjct: 393 DVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLF 452

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           R +     +LDI  YN ++DG+CK G+L  A +L   +  + L  D  TYNIMI GLC +
Sbjct: 453 RAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCRE 512

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G +D A +L   M+EN   PN   +   + G +R    ++  + L  MK+K    DA+  
Sbjct: 513 GLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATTA 572

Query: 370 SMVVDLL 376
            +++  L
Sbjct: 573 ELLIRFL 579



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 162/331 (48%), Gaps = 4/331 (1%)

Query: 48  NPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR 107
           + DV T N  I+ LCH         +   M   G++P++VT N I++ LC  G ++ A  
Sbjct: 107 SADVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALW 166

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
           L++ M       NA TY  L++G C  G  + A E    M       + V YN +++G C
Sbjct: 167 LVEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLC 226

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF-EIHQVEHALKLFEEM-QRDDVAAD 225
           K   V EAL L  EM    ++P VVTYN L  GL  E       + LF EM     +  D
Sbjct: 227 KRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPD 286

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
             T++  +DG CK G ++ A  +   +  +  E ++  YN LI G C   ++E A+ +F 
Sbjct: 287 VQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFG 346

Query: 286 SLPR--RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            + R     +  VVT+N +IHG C   ++DKA  L  +M    + P+V  + +LI GF  
Sbjct: 347 LMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCE 406

Query: 344 INKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + KP    EL   MKE   +P+    ++V+D
Sbjct: 407 VKKPLAARELFFTMKEHGQVPNLQTCAVVLD 437



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 116/228 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT+N++I G CK   VDKA +L  +M G+ ++PDV T+ SLI G C       A+
Sbjct: 355 CLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAAR 414

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LFF M + G  P++ T  V++D L K     EA  L   M++  +  +   Y+ ++DG 
Sbjct: 415 ELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGM 474

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+N A +L   +   G K D  +YNI+I G C+   +++A  L R+M   G  P  
Sbjct: 475 CKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNK 534

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            +YN    GL   + +  + K  + M+      D +T    I  L  N
Sbjct: 535 CSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATTAELLIRFLSAN 582



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 3/207 (1%)

Query: 140 AEELFGSMESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
           A  L   + S+G    DV + NI IN  C  ++     ++   M   G++PT+VT NT+ 
Sbjct: 93  AISLIKILHSLGDGSADVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIV 152

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            GL     V HAL L E+M+      +  TY   ++GLCK G    A+E  + +      
Sbjct: 153 NGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLG 212

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND-GQMDKAHD 317
            ++  YN ++DGLCK G +  AL L   +    +  +VVTYN +I GLC + G   +   
Sbjct: 213 PNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVG 272

Query: 318 LFLDM-EENAVAPNVIIFVTLIHGFVR 343
           LF +M  E  + P+V  F  L+ GF +
Sbjct: 273 LFNEMVAEKGIVPDVQTFSILVDGFCK 299


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  253 bits (647), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 138/355 (38%), Positives = 212/355 (59%), Gaps = 15/355 (4%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G +   + V Y+TIIDGLCK+  V+ A  L+ +M  + I+P VVT NSLI+G C    + 
Sbjct: 204 GKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFK 263

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  L  EM+ + + P V TFN+++D LCK GK+ EA   + +M++  V P+  TYS+LM
Sbjct: 264 EAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLM 323

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+CL  ++N+A+ +               Y+I+ING+CK K V++ALSL+ EM  + I 
Sbjct: 324 DGYCLVNEVNKAKHV---------------YSIVINGFCKIKMVDKALSLFYEMRCRRIA 368

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  VTYN+L  GL +  ++ +A +L +EM+     AD  TYN+ ID LCKN ++ +A+ L
Sbjct: 369 PDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIAL 428

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            + +     +LD+  YN LIDGLCK GRL+ A  +F+ L  +     V TY IMI+GLC 
Sbjct: 429 VKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCL 488

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           +G +++A  L   ME+N   P+ +   T+I      +K  +  +LL +M  + ++
Sbjct: 489 EGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGLL 543



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/362 (33%), Positives = 193/362 (53%), Gaps = 15/362 (4%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V+Y T+I+GLCK G    A  +  Q++G+ ++ DVV Y+++I GLC     N+A  L+
Sbjct: 175 NQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELY 234

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ + + P+VVT N ++   C  G+  EA  LL  MV +++ P+ +T++ L+D  C  
Sbjct: 235 SEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKE 294

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GKI  A+     M   G   D V+Y+ L++GYC   EV +A  +Y  +++          
Sbjct: 295 GKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVIN---------- 344

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
                G  +I  V+ AL LF EM+   +A DT TYN+ IDGLCK+G I  A EL   +  
Sbjct: 345 -----GFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRD 399

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                DI  YN LID LCK+  ++ A+ L + +  + +  D+ TYNI+I GLC  G++  
Sbjct: 400 SGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKD 459

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  +F D+        V  +  +I+G       ++   LL KM++   +PDA     ++ 
Sbjct: 460 AQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIR 519

Query: 375 LL 376
            L
Sbjct: 520 AL 521



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 187/381 (49%), Gaps = 20/381 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + +  I+  L K        +LF Q++   I P++V+ + LI+  CH      A  +
Sbjct: 69  PSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSI 128

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +++  G  P+ +T   ++   C N K+ EA    D ++      N  +Y TL++G C 
Sbjct: 129 FAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCK 188

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A ++   +E      D V Y+ +I+G CK+K V +A  LY EM++K I PTVVT
Sbjct: 189 IGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVT 248

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA-------- 245
            N+L  G   + Q + A  L  EM   ++  D  T+N  +D LCK G I EA        
Sbjct: 249 LNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMM 308

Query: 246 -------VELFRTLGILKCELD-----IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
                  V  + +L    C ++        Y+ +I+G CK   ++ AL LF  +  R + 
Sbjct: 309 KEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIA 368

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            D VTYN +I GLC  G++  A +L  +M ++    ++I + +LI    + +   K I L
Sbjct: 369 PDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIAL 428

Query: 354 LHKMKEKKVMPDASIVSMVVD 374
           + K+K++ +  D    ++++D
Sbjct: 429 VKKIKDQGIQLDMYTYNILID 449


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 134/364 (36%), Positives = 210/364 (57%), Gaps = 4/364 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V Y+ IID LCK+G    A+ LF +M  + I P+V TYN +I G C    W++A+R
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+++ + P V+TFN ++    K GK+ EA +L D M+ R + P+  TY++++ GFC
Sbjct: 353 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 412

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              + + A+ +F  M S     D V++N +I+ YC+ K V+E + L RE+  +G+     
Sbjct: 413 KHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  E+  +  A  LF+EM    V  DT T N  + G C+N  + EA+ELF  +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            + K +LD  AYN +I G+CK  +++ A +LF SLP   +  DV TYN+MI G C    +
Sbjct: 529 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAI 588

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A+ LF  M++N   P+   + TLI G ++  +  K IEL+ +M+      DA  + M 
Sbjct: 589 SDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMA 648

Query: 373 VDLL 376
            +++
Sbjct: 649 EEII 652



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/377 (32%), Positives = 197/377 (52%), Gaps = 21/377 (5%)

Query: 13  KPNTVTYNTIIDGLCKE----------------GFVDKAKALFLQMKGENINPDVVTYNS 56
           +P+ VT+NT++ GLC E                GF++ A ALF QM    + P V+T+N+
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE-AVALFDQMVEIGLTPVVITFNT 231

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
           LI+GLC      EA  L  +M+ +G+   VVT+  I++ +CK G    A  LL  M +  
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           ++P+   YS ++D  C  G  + A+ LF  M   G   +  +YN +I+G+C      +A 
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            L R+M+ + I P V+T+N L     +  ++  A KL +EM    +  DT TYN+ I G 
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           CK+    +A  +F     L    D+  +N +ID  C++ R++  ++L R + RR LVA+ 
Sbjct: 412 CKHNRFDDAKHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
            TYN +IHG C    ++ A DLF +M  + V P+ I    L++GF    K  + +EL   
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527

Query: 357 MKEKKVMPDASIVSMVV 373
           ++  K+  D    ++++
Sbjct: 528 IQMSKIDLDTVAYNIII 544



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 155/294 (52%), Gaps = 4/294 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +T+N +I    KEG + +A+ L  +M    I PD VTYNS+I+G C  N +++AK +
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 423

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F    D    P VVTFN I+D  C+  ++DE  +LL  + +R +  N  TY+TL+ GFC 
Sbjct: 424 F----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +N A++LF  M S G   D ++ NIL+ G+C+N+++EEAL L+  +    I    V 
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  G+ +  +V+ A  LF  +    V  D  TYN  I G C    I +A  LF  + 
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
               E D   YN LI G  K+G ++ ++EL   +       D  T  +    +C
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIIC 653



 Score =  160 bits (405), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 176/369 (47%), Gaps = 19/369 (5%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N +I    +    D A +L+ +M+   I  ++ ++N LI   C  +  + +   F ++  
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 80  QGVQPSVVTFNVIMDELCKNGKMD---------------EASRLLDLMVQRDVRPNAFTY 124
            G QP VVTFN ++  LC   ++                EA  L D MV+  + P   T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           +TL++G CL G++  A  L   M   G   D V+Y  ++NG CK  + + AL+L  +M  
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
             IKP VV Y+ +   L +      A  LF EM    +A +  TYN  IDG C  G   +
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A  L R +   +   D+  +N LI    K G+L  A +L   +  R +  D VTYN MI+
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G C   + D A  +F  M     +P+V+ F T+I  + R  +  + ++LL ++  + ++ 
Sbjct: 410 GFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465

Query: 365 DASIVSMVV 373
           + +  + ++
Sbjct: 466 NTTTYNTLI 474



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 127/229 (55%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           ++  P+ VT+NTIID  C+   VD+   L  ++    +  +  TYN+LIHG C  ++ N 
Sbjct: 426 LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 485

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+ LF EM+  GV P  +T N+++   C+N K++EA  L +++    +  +   Y+ ++ 
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C   K++ A +LF S+   G + D  +YN++I+G+C    + +A  L+ +M   G +P
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
              TYNTL  G  +  +++ +++L  EM+ +  + D  T     + +C+
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICR 654



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 148/310 (47%), Gaps = 18/310 (5%)

Query: 74  FFEMMDQGVQP--SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           FF+ M +  +P  + V  N ++    +  + D A  L   M  R +  N ++++ L+  F
Sbjct: 93  FFDYMVRS-RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCF 151

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL--------------- 176
           C   K++ +   FG +  +G + D V++N L++G C    + EAL               
Sbjct: 152 CDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAV 211

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           +L+ +MV  G+ P V+T+NTL  GL    +V  A  L  +M    +  D  TY T ++G+
Sbjct: 212 ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 271

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           CK G    A+ L   +     + D+  Y+ +ID LCK G    A  LF  +  + +  +V
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
            TYN MI G C+ G+   A  L  DM E  + P+V+ F  LI   V+  K  +  +L  +
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 391

Query: 357 MKEKKVMPDA 366
           M  + + PD 
Sbjct: 392 MLHRCIFPDT 401



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 131/279 (46%), Gaps = 15/279 (5%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D+A    D MV+      A   + ++  F    + + A  L+  ME      +  S+NI
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL---------- 211
           LI  +C   ++  +LS + ++   G +P VVT+NTL  GL    ++  AL          
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 212 -----KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
                 LF++M    +     T+NT I+GLC  G ++EA  L   +      +D+  Y  
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           +++G+CK G  + AL L   +    +  DVV Y+ +I  LC DG    A  LF +M E  
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +APNV  +  +I GF    + S    LL  M E+++ PD
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 20/220 (9%)

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           V  N +I  + +    + A+SLYR+M  + I   + ++N L     + H++  +L  F +
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           + +     D  T+NT + GLC    I EA+ LF              Y      + ++G 
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALF-------------GY------MVETGF 207

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           LE A+ LF  +    L   V+T+N +I+GLC +G++ +A  L   M    +  +V+ + T
Sbjct: 208 LE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +++G  ++      + LL KM+E  + PD  I S ++D L
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 132/368 (35%), Positives = 212/368 (57%), Gaps = 3/368 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYN ++D LCK   V  A+ +  +M      P+V+T+NSL+ G C   + ++A+
Sbjct: 88  CPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDAR 147

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M+ +G++P+VVT++ ++D LCK+ K  EA  +L+ M    V P+AFTYS L+ G 
Sbjct: 148 KLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGL 207

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   KI  AE++   M   GC  D V Y+ +I+ +CK+ ++ EA    +EM  +   P V
Sbjct: 208 CKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDV 267

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VTYNT+  GL ++ ++  A  + ++MQ   DV  D  TY+T I+GLCK+  +VEA +L  
Sbjct: 268 VTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLD 327

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C  D+  Y  +IDGLCK GRLE A  L + + R     +VVTY  +I GLC   
Sbjct: 328 RMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKAR 387

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV--MPDASI 368
           ++D+A  +  +M      PN++ + T+++G     +  +  +L+ +MK+ +    PDA+ 
Sbjct: 388 KVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAAT 447

Query: 369 VSMVVDLL 376
              +V+ L
Sbjct: 448 YRTIVNAL 455



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 186/353 (52%), Gaps = 4/353 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+  II  +   G +D A      ++    +P+VVTY +LI     A    EA +L
Sbjct: 23  PDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKL 79

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM ++G  P++VT+NV++D LCK   +  A  ++  M++    PN  T+++L+DGFC 
Sbjct: 80  LEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCK 139

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A +L G M + G + + V+Y+ LI+G CK+++  EA  +  EM + G+ P   T
Sbjct: 140 RGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFT 199

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  GL +  ++E A ++   M       D   Y++ I   CK+G ++EA +  + + 
Sbjct: 200 YSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMR 259

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV-LVADVVTYNIMIHGLCNDGQM 312
             +   D+  YN +IDGLCK G++  A  +   +     ++ DVVTY+ +I+GLC    +
Sbjct: 260 KQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDML 319

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +A  L   M +    P+V+ + T+I G  +  +  +   LL  MK     P+
Sbjct: 320 VEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPN 372



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 88/247 (35%), Positives = 145/247 (58%), Gaps = 3/247 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C P+ V Y++II   CK G + +A+    +M+ +  +PDVVTYN++I GLC      
Sbjct: 225 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 284

Query: 69  EAKRLFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           EA+ +  +M + G V P VVT++ +++ LCK+  + EA +LLD M +    P+  TY+T+
Sbjct: 285 EAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 344

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DG C  G++  AE L   M+  GC  + V+Y  LI+G CK ++V+EA  +  EM + G 
Sbjct: 345 IDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGC 404

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ--RDDVAADTSTYNTFIDGLCKNGYIVEA 245
            P +VTYNT+  GL    +++ A +L + M+  R + + D +TY T ++ L  +  + EA
Sbjct: 405 PPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEA 464

Query: 246 VELFRTL 252
            +L   +
Sbjct: 465 EQLLEQM 471



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 145/280 (51%), Gaps = 3/280 (1%)

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           C  G +  A  LL+ M      P+AFT++ ++      G ++ A      + SMGC  + 
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNV 57

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           V+Y  LI  + + K++EEA+ L  EM  +G  P +VTYN L   L ++  V  A  + ++
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M     A +  T+N+ +DG CK G + +A +L   +       ++  Y+ LIDGLCKS +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
              A E+   +    +  D  TY+ +IHGLC   ++++A  +   M  +   P+V+++ +
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +IH F +  K  +  + L +M++++  PD    + V+D L
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGL 277


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 134/349 (38%), Positives = 205/349 (58%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + +PN V YN IID +CK   V+ A  L+ QM  + I PDV TYN+LI G    +  N
Sbjct: 194 GKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLN 253

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A  LF +M  + + P+V TFN+++D  CK GK+++A  +L +M++ D++P+  TY++LM
Sbjct: 254 YAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLM 313

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+C   K+N+A+++F SM S G   +   Y  ++NG+CK K V+EA++L+ EM  + I 
Sbjct: 314 DGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKII 373

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTY++L  GL ++ ++ +ALKL +EM       +  TY++ +D LCKN ++ +A+ L
Sbjct: 374 PNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIAL 433

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              L       D+  Y  LI GLC+SGRLE A  +F  L  +    DV  Y +MI G C+
Sbjct: 434 LTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCD 493

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            G  DKA  L   ME+N   PN   +  +I      ++     +LL +M
Sbjct: 494 KGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREM 542



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 198/359 (55%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + V+Y T+I+GLCK G +  A  L  ++ G+ + P+ V YN +I  +C A   N+A  L+
Sbjct: 165 DQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLY 224

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M+ + + P V T+N ++       K++ A  L + M + ++ PN +T++ L+DGFC  
Sbjct: 225 SQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKE 284

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK+N A+ +   M     K D V+YN L++GYC   +V +A  ++  M S G+   V  Y
Sbjct: 285 GKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIY 344

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            T+  G  +I  V+ A+ LFEEM+   +  +  TY++ IDGLCK G I  A++L   +  
Sbjct: 345 TTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHD 404

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                +I  Y+ ++D LCK+  ++ A+ L  +L  + +  D+ TY I+I GLC  G+++ 
Sbjct: 405 RGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLED 464

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A ++F D+       +V  +  +I GF       K + LL KM++   +P+A    +V+
Sbjct: 465 AQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVI 523



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 192/363 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P T  +N I+  L K      A +L  QM+   I  D  T+N LI+        + +  +
Sbjct: 59  PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +++ +G  P+ +TFN ++  LC  G + +A    D +V +    +  +Y TL++G C 
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK 178

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+I  A +L   ++    + + V YN++I+  CK K V +A  LY +MV+K I P V T
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFT 238

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G   + ++ +A+ LF +M+++++  +  T+N  +DG CK G + +A  +   + 
Sbjct: 239 YNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMM 298

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+  YN L+DG C   ++  A ++F S+    ++A+V  Y  M++G C    +D
Sbjct: 299 KDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVD 358

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A +LF +M    + PNV+ + +LI G  ++ +    ++L+ +M ++   P+    S ++
Sbjct: 359 EAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSIL 418

Query: 374 DLL 376
           D L
Sbjct: 419 DAL 421



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 149/280 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T+N ++DG CKEG V+ AK +   M  ++I PDVVTYNSL+ G C  N  N+AK +
Sbjct: 269 PNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDI 328

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   GV  +V  +  +++  CK   +DEA  L + M  R + PN  TYS+L+DG C 
Sbjct: 329 FDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCK 388

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+I  A +L   M   G   + V+Y+ +++  CKN  V++A++L   +  +GI+P + T
Sbjct: 389 LGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYT 448

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +  ++E A  +FE++       D   Y   I G C  G+  +A+ L   + 
Sbjct: 449 YTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKME 508

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
              C  + + Y  +I  L +    + A +L R +  R L+
Sbjct: 509 DNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 164/330 (49%)

Query: 45  ENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDE 104
           +N  P    +N ++  L  A   + A  L  +M   G++    TFN++++   + G    
Sbjct: 55  KNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSL 114

Query: 105 ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
           +  +   ++++   P A T++TL+ G CL G I++A      + + G   D VSY  LIN
Sbjct: 115 SFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLIN 174

Query: 165 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAA 224
           G CK   +  AL L + +  K ++P  V YN +   + +   V  A  L+ +M    +  
Sbjct: 175 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICP 234

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           D  TYN  I G      +  A++LF  +       ++  +N L+DG CK G++  A  + 
Sbjct: 235 DVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVL 294

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
             + +  +  DVVTYN ++ G C+  +++KA D+F  M    V  NV I+ T+++GF +I
Sbjct: 295 AIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKI 354

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
               + I L  +M+ +K++P+    S ++D
Sbjct: 355 KMVDEAINLFEEMRCRKIIPNVVTYSSLID 384



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 147/298 (49%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           ++ +   P    FN I+  L K      A  L   M    +  + FT++ L++ F   G 
Sbjct: 52  LLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGL 111

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
            + +  +F  +   G     +++N LI G C    + +AL  + ++V++G     V+Y T
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  GL ++ ++  AL+L + +    V  +   YN  ID +CK   + +A +L+  +   +
Sbjct: 172 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 231

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              D+  YN LI G     +L  A++LF  + +  +  +V T+NI++ G C +G+++ A 
Sbjct: 232 ICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAK 291

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +   M ++ + P+V+ + +L+ G+  INK +K  ++   M    V+ +  I + +V+
Sbjct: 292 VVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVN 349



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 137/278 (49%), Gaps = 4/278 (1%)

Query: 101 KMDEASRLLD----LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           K DE + L+     L++ ++  P  F ++ ++         + A  L   ME  G + D 
Sbjct: 37  KQDEENNLISSFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDF 96

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            ++NILIN + +      + S++ +++ KG  PT +T+NTL  GL     +  AL   ++
Sbjct: 97  FTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDK 156

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           +       D  +Y T I+GLCK G I  A++L + +     + +   YN +ID +CK+  
Sbjct: 157 VVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKL 216

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +  A +L+  +  + +  DV TYN +I G     +++ A DLF  M++  + PNV  F  
Sbjct: 217 VNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNI 276

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           L+ GF +  K +    +L  M +  + PD    + ++D
Sbjct: 277 LVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMD 314



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TY  +I GLC+ G ++ A+ +F  +  +  N DV  Y  +I G C    +++A  
Sbjct: 443 RPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALA 502

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           L  +M D G  P+  T+ +++  L +  + D A +LL  M+ R
Sbjct: 503 LLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVR 545


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 135/363 (37%), Positives = 216/363 (59%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY T++D LC+ G VD A + F ++  E + P+ V + +LIHGLC  + W++A+ L
Sbjct: 379 PNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEEL 438

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+ +G+ P+ + FN +++ LCK G +  A  + DLMV+ DV+ +  TY+TL+DG+CL
Sbjct: 439 AVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCL 498

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A +L   M   G K ++V+YN +INGYCKN  +E+A SL+R+M SKG+ P +V 
Sbjct: 499 DGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVI 558

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+T+  GLF+  ++  A +L+  M +  +     TYN  + GLC+N    +A+ +F  L 
Sbjct: 559 YSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLC 618

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           ++   L  + +N +ID L K GR + A +LF SL  R LV +VVTY +M+  L   G ++
Sbjct: 619 LIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLE 678

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +  DLFL +E+N    +  +   L+    +  +  K    L K+ E     +AS    +V
Sbjct: 679 ELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLV 738

Query: 374 DLL 376
            L+
Sbjct: 739 FLV 741



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/363 (33%), Positives = 200/363 (55%), Gaps = 2/363 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V+Y T+I+GL +EG +DKA  LF +M  + ++P+ +TYN L+HG C +    EA 
Sbjct: 202 CPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAI 261

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F +M   GV+P VVT+N +M  LCKNG+  EA ++ D MV++  +P++  Y TL+ G+
Sbjct: 262 GIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGY 321

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G + +  +L   M   G + D   +NILI  Y K+  V+EA+  + +M  +G+ P +
Sbjct: 322 ATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNI 381

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL-FR 250
           VTY T+   L  + +V+ A+  F+ +  + +  +   + T I GLC      +A EL   
Sbjct: 382 VTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVE 441

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +G   C   I  +N L++ LCK G +  A  +F  + R  +  DV+TY  +I G C DG
Sbjct: 442 MIGRGICPNTI-FFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDG 500

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++D+A  L   M  + V PN + + T+I+G+ +  +      L  +M  K V P   I S
Sbjct: 501 KVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYS 560

Query: 371 MVV 373
            ++
Sbjct: 561 TIL 563



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 181/340 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +TYN ++ G C  G   +A  +F +M  + + PDVVTYN+L+  LC      EA+++
Sbjct: 239 PNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKV 298

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+ +G +P    +  ++      G + +  +LLD+MV+   +P+ + ++ L+  +  
Sbjct: 299 FDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAK 358

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A   F  M   G   + V+Y  +++  C+  +V++A+S +  ++S+G+ P  V 
Sbjct: 359 HGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVV 418

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           + TL  GL    + + A +L  EM    +  +T  +NT ++ LCK G +  A  +F  + 
Sbjct: 419 FRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMV 478

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  + D+  Y  LIDG C  G+++ A +L   +    +  + VTYN +I+G C +G+++
Sbjct: 479 RVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIE 538

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            A  LF  M    V P ++I+ T++HG  +  + +   EL
Sbjct: 539 DACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKEL 578



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 176/345 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTYNT++  LCK G   +A+ +F  M  +   PD   Y +L+HG        +  +
Sbjct: 273 EPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQ 332

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+  G QP    FN+++    K+G +DEA      M Q+ + PN  TY T+MD  C
Sbjct: 333 LLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALC 392

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK++ A   F  + S G   + V +  LI+G C   + ++A  L  EM+ +GI P  +
Sbjct: 393 RVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTI 452

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            +NTL   L +   V  A  +F+ M R DV  D  TY T IDG C +G + EA +L   +
Sbjct: 453 FFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGM 512

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +   + +   YN +I+G CK+GR+E A  LFR +  + +   +V Y+ ++HGL    ++
Sbjct: 513 VLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRI 572

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
             A +L+L M +  +   +  +  ++ G  + N     + + H +
Sbjct: 573 AAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNL 617



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 184/358 (51%), Gaps = 5/358 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + +  TY+ +I    + G +D A A   ++         +T++ L+ GLCH    ++A  
Sbjct: 93  RADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMD 152

Query: 73  LFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR----PNAFTYSTL 127
           +    M   G  P+  ++N+++  LC   +  +A  LL  M+  D R    P+  +Y+T+
Sbjct: 153 IALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTV 212

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++G    G++++A  LF  M   G   + ++YN L++GYC + + +EA+ ++R+M   G+
Sbjct: 213 INGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGV 272

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P VVTYNTL + L +  +   A K+F+ M +     D+S Y T + G    GY+V+  +
Sbjct: 273 EPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQ 332

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +     + D   +N LI    K G ++ A+  F  + ++ L  ++VTY  ++  LC
Sbjct: 333 LLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALC 392

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             G++D A   F  +    + PN ++F TLIHG    +K  K  EL  +M  + + P+
Sbjct: 393 RVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPN 450



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 176/371 (47%), Gaps = 17/371 (4%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQ-MKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
             +T++ ++ GLC +     A  + L+ M      P+  +YN L+ GLC  N   +A  L
Sbjct: 130 QAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHL 189

Query: 74  FFEMMDQ----GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
              MM      G  P VV++  +++ L + G++D+A  L D M+ + + PN  TY+ L+ 
Sbjct: 190 LHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLH 249

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+C +GK   A  +F  M   G + D V+YN L+   CKN    EA  ++  MV KG KP
Sbjct: 250 GYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKP 309

Query: 190 TVVTYNTLFLG------LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
               Y TL  G      L ++HQ      L + M R+    D   +N  I    K+G + 
Sbjct: 310 DSSIYGTLLHGYATEGYLVQMHQ------LLDVMVRNGTQPDHYIFNILIGAYAKHGMVD 363

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           EA+  F  +       +I  Y  ++D LC+ G+++ A+  F  L    L  + V +  +I
Sbjct: 364 EAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLI 423

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           HGLC   + DKA +L ++M    + PN I F TL++   +    ++   +   M    V 
Sbjct: 424 HGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQ 483

Query: 364 PDASIVSMVVD 374
            D    + ++D
Sbjct: 484 CDVITYTTLID 494



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 152/313 (48%), Gaps = 5/313 (1%)

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           E+  +   + ++  +  + T+++++    + G +D A   L  +++      A T+S L+
Sbjct: 79  ESPAVALSLFNRMPRADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLL 138

Query: 129 DGFCLTGKINRAEEL-FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-- 185
            G C   + + A ++    M ++GC  +  SYNIL+ G C     ++AL L   M++   
Sbjct: 139 KGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDT 198

Query: 186 --GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
             G  P VV+Y T+  GL    Q++ A  LF+EM    ++ +  TYN  + G C +G   
Sbjct: 199 RGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPK 258

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           EA+ +FR +     E D+  YN L+  LCK+GR   A ++F S+ ++    D   Y  ++
Sbjct: 259 EAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLL 318

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           HG   +G + + H L   M  N   P+  IF  LI  + +     + +    KM+++ + 
Sbjct: 319 HGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLH 378

Query: 364 PDASIVSMVVDLL 376
           P+      V+D L
Sbjct: 379 PNIVTYGTVMDAL 391



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 112/233 (48%), Gaps = 35/233 (15%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTYNTII+G CK G ++ A +LF QM  + +NP +V Y++++HGL        AK 
Sbjct: 518 KPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKE 577

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L+  M+  G++  + T+N+I+  LC+N   D+A R+   +   D      T++ ++D   
Sbjct: 578 LYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALL 637

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+ + A++LF S                                   ++++G+ P VV
Sbjct: 638 KGGRHDEAKDLFAS-----------------------------------LLARGLVPNVV 662

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           TY  +   L E   +E    LF  ++++   AD+   N  +  L + G + +A
Sbjct: 663 TYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKA 715



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 11/152 (7%)

Query: 209 HALKLFEEMQRDDVAADTSTY--NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           HA  LF+E+ R D    TS +  N+ +  + +    V A+ LF  +       D+  Y+ 
Sbjct: 50  HAHHLFDELLRRDT---TSIFDLNSALSAVARESPAV-ALSLFNRMP----RADLCTYSI 101

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL-DMEEN 325
           +I    ++G L++A      + R    A  +T++ ++ GLC+D +   A D+ L  M   
Sbjct: 102 VIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPAL 161

Query: 326 AVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
              PN   +  L+ G    N+  + + LLH M
Sbjct: 162 GCTPNAFSYNILLKGLCDENRSQQALHLLHTM 193


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  251 bits (641), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 127/348 (36%), Positives = 209/348 (60%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           ++ +P+ + Y  IID  CK+  V  A  L+ +M  + I P+VVT+NSLI+G C      E
Sbjct: 188 LLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKE 247

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  L  EM    V P+V TFN+++D LCK G++ +A+ +L +M+++ V PN  TY++LMD
Sbjct: 248 AVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMD 307

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+ L  ++N+A+ +F ++   G   +  SY+++ING CKNK V+EA+ L++EM  K + P
Sbjct: 308 GYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTP 367

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             VTY++L  GL +  ++     L +E+      A+  TYN+ ++GLCKN  + +A+ L 
Sbjct: 368 NTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALL 427

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +     + D+  Y  L+DGLCK+GRL+ A  +++ L  +    ++  Y +MI+GLC +
Sbjct: 428 TKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKE 487

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           G  D+A  L   ME+N   P+ + + TLI    + NK  K ++LL +M
Sbjct: 488 GFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREM 535



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 201/397 (50%), Gaps = 36/397 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    +N I+  L K      A +   QM+ + I P++ T+N LI+   H    N A  +
Sbjct: 51  PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G QP  VT N ++  LC NGK+ EA    D ++++    +  +Y TL++G C 
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCK 170

Query: 134 TGKINRAEELFGSMES-MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +G+   A +L   +E  +  + D + Y  +I+ +CK+K V +A  LY EM+ K I P VV
Sbjct: 171 SGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVV 230

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV------ 246
           T+N+L  G   + Q++ A+ L  EM  ++V  +  T+N  IDGLCK G + +A       
Sbjct: 231 TFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVM 290

Query: 247 -----------------------------ELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
                                         +F T+ +     ++ +Y+ +I+GLCK+  +
Sbjct: 291 IKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMV 350

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A++LF+ +  + +  + VTY+ +I GLC  G++    DL  ++       N+I + +L
Sbjct: 351 DEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSL 410

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           ++G  + ++  K I LL KMK++ + PD S  + +VD
Sbjct: 411 LNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVD 447



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 131/273 (47%), Gaps = 1/273 (0%)

Query: 103 DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
           D  S    ++   +  P  F ++ ++           A      ME  G + +  ++NIL
Sbjct: 35  DAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNIL 94

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           IN +    ++  A S+  +++  G +P  VT NTL  GL    +V+ AL   + + R   
Sbjct: 95  INCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRF 154

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTL-GILKCELDIQAYNCLIDGLCKSGRLEIAL 281
             D  +Y T I+GLCK+G    A++L R + G+L    D+  Y  +ID  CK   +  A 
Sbjct: 155 HLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAY 214

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           +L+  +  + +  +VVT+N +I+G C  GQ+ +A  L  +M  N V PNV  F  LI G 
Sbjct: 215 DLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGL 274

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +  +  K   +L  M ++ V P+    + ++D
Sbjct: 275 CKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMD 307



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 58/104 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TY T++DGLCK G +  A+ ++  +  +    ++  Y  +I+GLC    ++EA  
Sbjct: 436 QPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALS 495

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
           L  +M D G  P  VT+  ++  L KN K  +A +LL  M+ R+
Sbjct: 496 LLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIARE 539


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  250 bits (639), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 130/361 (36%), Positives = 210/361 (58%), Gaps = 7/361 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKA----KALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           C P  +T+  II GLCKEG ++ A      +F+   G  ++PDV+T+NS++ GLC     
Sbjct: 167 CPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESG--LSPDVITFNSVLDGLCKEQRI 224

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            +A  +F   +++G +P+VVT++ ++D L K  KMDEA +LL  MV+   R N  TYST+
Sbjct: 225 LDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTV 284

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DG    G++  A  +   M   GC  D V+YN LI+G+ K + + EA+ L REM+  G 
Sbjct: 285 VDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGF 344

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P+VVTY TL  GL    + + A+++ + M     A +  TY++ +DGLCK G + EA+ 
Sbjct: 345 HPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALG 404

Query: 248 LFRTLGILK-CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            F  +   +     + AY+ LIDGLCK+G+++ A E    + R   + DVVT++I+I+GL
Sbjct: 405 YFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGL 464

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C+ G++D   +LF  M E    P+++ + TL+    R ++  +  +L  +M+   + PD 
Sbjct: 465 CDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDR 524

Query: 367 S 367
           S
Sbjct: 525 S 525



 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/402 (32%), Positives = 203/402 (50%), Gaps = 38/402 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSL--------------- 57
           +P  VTY+T+IDGLC++  VDK   L  +M G    P+ VTYN+L               
Sbjct: 98  RPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFS 157

Query: 58  --------------------IHGLCHANDWNEAKRLFFE--MMDQGVQPSVVTFNVIMDE 95
                               I GLC   +   A R+  E  M++ G+ P V+TFN ++D 
Sbjct: 158 LLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDG 217

Query: 96  LCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHD 155
           LCK  ++ +A  +    ++R  RPN  TYSTL+DG     K++ A +L   M  +GC+ +
Sbjct: 218 LCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRAN 277

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
            V+Y+ +++G  K   +E+A+ + R+M   G  P  VTYNTL  G F+  ++  A+ L  
Sbjct: 278 TVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLR 337

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
           EM          TY T   GLC++G   EAVE+   +    C  +   Y+ ++DGLCK+G
Sbjct: 338 EMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAG 397

Query: 276 RLEIALELFRSLPRRVLVAD-VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           R+  AL  F  + R  +VA  V+ Y+ +I GLC  G++D+A++    M      P+V+ F
Sbjct: 398 RVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTF 457

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             LI+G     +    +EL   M E+  +PD    + +VD L
Sbjct: 458 SILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRL 499



 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 124/371 (33%), Positives = 201/371 (54%), Gaps = 8/371 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEA 70
           C P  VTYNT+IDGLCK G ++ A  L+  M       P VVTY++LI GLC  ++ ++ 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            +L  EM  +G  P+ VT+N +++ L   G+  EA  LL+ M      P   T+  ++ G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 131 FCLTGKINRA----EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
            C  G+I  A    +E+F  M   G   D +++N +++G CK + + +A ++++  + +G
Sbjct: 181 LCKEGEIEAAFRVVDEMF--MIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG 238

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            +P VVTY+TL  GL ++ +++ AL+L  +M      A+T TY+T +DGL K G + +AV
Sbjct: 239 CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAV 298

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            + R +    C  D   YN LIDG  K  RL  A+ L R +        VVTY  + HGL
Sbjct: 299 VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGL 358

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM-KEKKVMPD 365
           C  G+ D+A ++   M     APN I + +++ G  +  + ++ +    KM +++ V P 
Sbjct: 359 CRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPH 418

Query: 366 ASIVSMVVDLL 376
               S ++D L
Sbjct: 419 VIAYSALIDGL 429



 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 120/366 (32%), Positives = 200/366 (54%), Gaps = 3/366 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY  +IDGL K+  V +A  LF + + +  +P VVTYN++I GLC       A  L
Sbjct: 28  PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTL 87

Query: 74  FFEM-MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           + +M +  G +P+VVT++ ++D LC++ ++D+  +LL+ M  R   PNA TY+TL++   
Sbjct: 88  YDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALL 147

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM--VSKGIKPT 190
             G+   A  L   M + GC  + +++ ++I G CK  E+E A  +  EM  +  G+ P 
Sbjct: 148 GQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPD 207

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V+T+N++  GL +  ++  A  +F+         +  TY+T IDGL K   + EA++L  
Sbjct: 208 VITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLA 267

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +  L C  +   Y+ ++DGL K GR+E A+ + R +     + D VTYN +I G     
Sbjct: 268 KMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQ 327

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++ +A  L  +M E    P+V+ + TL HG  R  +  + +E+L  M  +   P+A   S
Sbjct: 328 RLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYS 387

Query: 371 MVVDLL 376
            +VD L
Sbjct: 388 SIVDGL 393



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/346 (34%), Positives = 188/346 (54%), Gaps = 3/346 (0%)

Query: 22  IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG 81
           +IDGLCK   VDKA  LF QM  + I PDVVTY +LI GL       EA  LF E   +G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLM-VQRDVRPNAFTYSTLMDGFCLTGKINRA 140
             P+VVT+N ++D LCK G+++ A  L D M +    RP   TYSTL+DG C   ++++ 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
            +L   M   GC  + V+YN L+N        +EA SL  +M + G  P ++T+  +  G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 201 LFEIHQVEHALKLFEE--MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
           L +  ++E A ++ +E  M    ++ D  T+N+ +DGLCK   I++A  +F+      C 
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            ++  Y+ LIDGL K  +++ AL+L   +      A+ VTY+ ++ GL   G+M+ A  +
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
              M +    P+ + + TLI GF +  +  + + LL +M E    P
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHP 346



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 100/275 (36%), Positives = 145/275 (52%), Gaps = 11/275 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ NTVTY+T++DGL K G ++ A  +  QM+     PD VTYN+LI G        EA 
Sbjct: 274 CRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAV 333

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM++ G  PSVVT+  +   LC++G+ DEA  +LD M  R   PNA TYS+++DG 
Sbjct: 334 GLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGL 393

Query: 132 CLTGKINRAEELFGSMESMGCKHDDV------SYNILINGYCKNKEVEEALSLYREMVSK 185
           C  G++    E  G  E M    D+V      +Y+ LI+G CK  +++EA      M+  
Sbjct: 394 CKAGRVT---EALGYFEKMA--RDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRA 448

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G  P VVT++ L  GL +  +++  L+LF  M       D  TY T +D LC+   + EA
Sbjct: 449 GRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEA 508

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            +LF+ +       D      +I GL +  R E A
Sbjct: 509 FDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDA 543



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 117/204 (57%), Gaps = 1/204 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY T+  GLC+ G  D+A  +   M      P+ +TY+S++ GLC A    EA   
Sbjct: 346 PSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGY 405

Query: 74  FFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           F +M  D+ V P V+ ++ ++D LCK GK+DEA   L+ M++    P+  T+S L++G C
Sbjct: 406 FEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLC 465

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+I+   ELF  M   GC  D V+Y  L++  C+   V+EA  L+++M S G+ P   
Sbjct: 466 DAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRS 525

Query: 193 TYNTLFLGLFEIHQVEHALKLFEE 216
           T  T+  GL E+++ E A ++ +E
Sbjct: 526 TRRTMIHGLLEVNRDEDAKRIQDE 549



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 3/132 (2%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           V  P+ + Y+ +IDGLCK G +D+A     +M      PDVVT++ LI+GLC A   +  
Sbjct: 414 VVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTG 473

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             LF  M ++G  P +VT+  ++D LC+  ++DEA  L   M    + P+  T  T++ G
Sbjct: 474 LELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHG 533

Query: 131 FCLTGKINRAEE 142
                ++NR E+
Sbjct: 534 LL---EVNRDED 542



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 1/145 (0%)

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           IDGLCK+  + +A+ LF+ +       D+  Y  LIDGL K  R++ A +LF     +  
Sbjct: 2   IDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGC 61

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN-AVAPNVIIFVTLIHGFVRINKPSKVI 351
              VVTYN MI GLC  G+++ A  L+ DM  +    P V+ + TLI G  R ++  K  
Sbjct: 62  HPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGC 121

Query: 352 ELLHKMKEKKVMPDASIVSMVVDLL 376
           +LL +M  +   P+A   + +V+ L
Sbjct: 122 KLLEEMAGRGCAPNAVTYNTLVNAL 146



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 40/62 (64%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY T++D LC+   VD+A  LF QM+ + ++PD  T  ++IHGL   N   +AK
Sbjct: 485 CVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAK 544

Query: 72  RL 73
           R+
Sbjct: 545 RI 546



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%)

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           MI GLC   ++DKA  LF  M + A+ P+V+ +  LI G  +  +  +  +L  + + K 
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 362 VMPDASIVSMVVDLL 376
             P     + ++D L
Sbjct: 61  CHPTVVTYNTMIDGL 75


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  250 bits (639), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 133/330 (40%), Positives = 198/330 (60%), Gaps = 1/330 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN + YNT+IDGLCK+G VD+A  L  +M    I  DV +YNS+IHG C    +  A +L
Sbjct: 208 PNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKL 267

Query: 74  FFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             EM+ +G V P V TFN+++D LCK G++ EA  ++ +M++R  +P+  +Y+ LM+G+C
Sbjct: 268 LDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYC 327

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L+G +  A+++F  M       + +SY  LINGYCK + V+EA+ L  EM +K + P  V
Sbjct: 328 LSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTV 387

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L  GL +  +  +   L E M+     AD  TYN  +D   K+    +A+ LF+ +
Sbjct: 388 TYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHI 447

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +    +I+ YN L+DGLCKSGRL+ A E+F+ L  +    ++ TYNIMIHGLC +G +
Sbjct: 448 IEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFL 507

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           D+A  L   M  N   PN I F T++   +
Sbjct: 508 DEAEALLYKMVNNNYLPNYITFDTIVRAIL 537



 Score =  175 bits (444), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 182/355 (51%), Gaps = 1/355 (0%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
            T++ GLC +G V +A +L  +        D V Y ++I+GLC      +A ++F +M  
Sbjct: 144 TTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKK 203

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
             V P+++ +N ++D LCK G +DEA  L   MV+  +  + ++Y++++ GFC  G+   
Sbjct: 204 IRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQA 263

Query: 140 AEELFGSMESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
           A +L   M   G  + DV ++NILI+G CK   V EA ++   M+ +G KP +V+YN L 
Sbjct: 264 AVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALM 323

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            G      V  A ++F++M       +  +Y T I+G CK   + EA+ L   +      
Sbjct: 324 NGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLV 383

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            D   YNCL+DGL KSGR     +L  ++      AD++TYN+++       + DKA  L
Sbjct: 384 PDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALAL 443

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           F  + E  ++PN+  +  L+ G  +  +     E+   +  K   P+    ++++
Sbjct: 444 FQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMI 498



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 176/358 (49%), Gaps = 2/358 (0%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           +N ++  L K    +   +L+  ++ +  I P ++T++ LI+          A  L   +
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +  G Q  V     +M  LC  G++ EA  LL   V R  R +   Y T+++G C  GK 
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A ++F  M+ +    + + YN +I+G CK   V+EA  L  EMV  GI+  V +YN++
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251

Query: 198 FLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
             G   + + + A+KL +EM  R  V  D  T+N  IDGLCK G + EA  +   +    
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            + DI +YN L++G C SG +  A ++F  +  R  + +V++Y  +I+G C    +D+A 
Sbjct: 312 WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAM 371

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            L  +M    + P+ + +  L+ G  +  +     +L+  M+      D    ++++D
Sbjct: 372 VLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLD 429



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 178/363 (49%), Gaps = 1/363 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ +T++ +I+   + G +  A +L   +       DV    +L+ GLC      EA  
Sbjct: 102 KPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVS 161

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  E +D+G +   V +  I++ LCK GK  +A ++   M +  V PN   Y+T++DG C
Sbjct: 162 LLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLC 221

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-IKPTV 191
             G ++ A  L   M   G + D  SYN +I+G+C     + A+ L  EMV +G + P V
Sbjct: 222 KQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDV 281

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+N L  GL ++ +V  A  +   M +     D  +YN  ++G C +G + EA ++F  
Sbjct: 282 YTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDK 341

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       ++ +Y  LI+G CK   ++ A+ L   +  + LV D VTYN ++ GL   G+
Sbjct: 342 MVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGR 401

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
                DL   M  +    ++I +  L+  + +  K  K + L   + E  + P+    ++
Sbjct: 402 SLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNI 461

Query: 372 VVD 374
           ++D
Sbjct: 462 LLD 464



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 2/87 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           EIG+   PN  TYN ++DGLCK G +  AK +F  +  +   P++ TYN +IHGLC    
Sbjct: 449 EIGI--SPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGF 506

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIM 93
            +EA+ L ++M++    P+ +TF+ I+
Sbjct: 507 LDEAEALLYKMVNNNYLPNYITFDTIV 533



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 36/50 (72%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGL 61
           C+PN  TYN +I GLCKEGF+D+A+AL  +M   N  P+ +T+++++  +
Sbjct: 487 CQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAI 536


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 135/349 (38%), Positives = 208/349 (59%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G +C+P+ V YNTIIDGLCK+  V  A  L+ +M  + + P+VVTY SLI+G C     +
Sbjct: 182 GEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLD 241

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  L  EM+ + V P+V TFN ++D LCK GKM EA  L+ +M++  V P+ FTY+ LM
Sbjct: 242 KAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALM 301

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+ L  +  +A+ +F  M  MG   D  SY+++I+G  K K ++EA+ L+  M ++ + 
Sbjct: 302 DGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVI 361

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VV Y++L  GL +  ++  ALK  +EM       +  TY + ID LCK+  + +A+ L
Sbjct: 362 PDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIAL 421

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            + +     + ++  YN L+DGLCK GRL  A ++F+ L  +    DVVTY+IMI+GLC 
Sbjct: 422 LKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCK 481

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           +   D+A  L   ME+    P+ I + T+I+ F   +   K  +LL +M
Sbjct: 482 ESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530



 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 122/362 (33%), Positives = 208/362 (57%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V+Y T+I+GLCK G    A  L  +++GE   PDVV YN++I GLC      +A  
Sbjct: 151 KLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFD 210

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L+ EM ++ V P+VVT+  ++   C  G++D+A  LL+ MV ++V PN  T++TL+DG C
Sbjct: 211 LYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLC 270

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A+ L   M   G   D  +YN L++GY   KE  +A +++  M   G+   V 
Sbjct: 271 KEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVH 330

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y+ +  GL ++  ++ A+ LFE M+ ++V  D   Y++ IDGLCK+G I  A++    +
Sbjct: 331 SYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEM 390

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++  Y  LID LCKS +++ A+ L + +  + + A++ TYNI++ GLC DG++
Sbjct: 391 HDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRL 450

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A  +F D+       +V+ +  +I+G  + +   + + LL KM++K  +PDA     +
Sbjct: 451 TDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETI 510

Query: 373 VD 374
           ++
Sbjct: 511 IN 512



 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 193/398 (48%), Gaps = 35/398 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  + +  I+  L K         LF +M+   I  + +T N LI+  CH    N A  +
Sbjct: 47  PPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSV 106

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +++  G QP ++T+  ++  LC NG++ E+    D +V + ++ +  +Y TL++G C 
Sbjct: 107 FAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCK 166

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A  L   +E   C+ D V YN +I+G CK+K V +A  LY EM  K + P VVT
Sbjct: 167 IGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVT 226

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL----- 248
           Y +L  G   + Q++ A  L  EM   +V  +  T+NT +DGLCK G + EA  L     
Sbjct: 227 YTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMM 286

Query: 249 ------------------------------FRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                                         F  +  +    D+ +Y+ +I GL K   L+
Sbjct: 287 KEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLD 346

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A++LF  +    ++ DVV Y+ +I GLC  G+++ A     +M +    PNVI + +LI
Sbjct: 347 EAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLI 406

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               + ++  K I LL K+K++ +  +    +++VD L
Sbjct: 407 DALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGL 444



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 163/329 (49%), Gaps = 3/329 (0%)

Query: 48  NPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR 107
           N  ++  ++  H L + ND   A   F  M+     P ++ F  I+  L K         
Sbjct: 14  NSTLLLSHTHFHSLPNLND---AIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIH 70

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
           L   M    ++ N  T + L++ +C   +IN A  +F  +  +G + D ++Y  LI G C
Sbjct: 71  LFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLC 130

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
            N +V+E+L+ +  +VS+GIK   V+Y TL  GL +I Q   AL+L  +++ +    D  
Sbjct: 131 LNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVV 190

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
            YNT IDGLCK+  + +A +L+  +   +   ++  Y  LI G C  G+L+ A  L   +
Sbjct: 191 MYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEM 250

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
             + +  +V T+N ++ GLC +G+M +A  L   M +  V P+V  +  L+ G+  + + 
Sbjct: 251 VLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEA 310

Query: 348 SKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            K   + + M +  V  D    S+++  L
Sbjct: 311 GKAKNVFNIMAQMGVTCDVHSYSVMISGL 339



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 99/170 (58%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V Y+++IDGLCK G ++ A     +M      P+V+TY SLI  LC ++  ++A  L
Sbjct: 362 PDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIAL 421

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++ DQG+Q ++ T+N+++D LCK+G++ +A ++   ++ +    +  TYS +++G C 
Sbjct: 422 LKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCK 481

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
               + A  L   ME  GC  D ++Y  +IN + +    ++A  L REM+
Sbjct: 482 ESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMI 531



 Score = 47.4 bits (111), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 40/65 (61%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + VTY+ +I+GLCKE   D+A  L  +M+ +   PD + Y ++I+     +  ++A++L 
Sbjct: 468 DVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLL 527

Query: 75  FEMMD 79
            EM+D
Sbjct: 528 REMID 532


>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 600

 Score =  249 bits (635), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/363 (38%), Positives = 206/363 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +   Y+ ++DGLCK+G V +A  LF QM G+ I PD+ TYN LIHGLC+ + W EA 
Sbjct: 219 CNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAA 278

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   MM +G+ P V TFNVI     K G +  A  +   MV   +  +  TY++++   
Sbjct: 279 PLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAH 338

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C+  ++  A E+F  M S GC  + V+Y  LI+G+C+ K + +A+    EMV+ G+ P V
Sbjct: 339 CMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNV 398

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT++TL  G+ +  +   A +LF  M +     +  T    +DGL K  +  EA+ LFR 
Sbjct: 399 VTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRE 458

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L  +  +L+I  YN ++DG+C SG+L  ALELF  L  + +  DVVTYNIMI GLC +G 
Sbjct: 459 LEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGL 518

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D A DL + MEEN   PN   +   + G +R  + SK  + L  MK+K    DA+    
Sbjct: 519 LDDAEDLLMKMEENGCPPNECTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQADATTTKF 578

Query: 372 VVD 374
           +++
Sbjct: 579 LIN 581



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 172/363 (47%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    +N +   + K      A +L   M    + P V T N +I+ LC  +       +
Sbjct: 81  PCVKDFNLLFSIVAKMKHYTTAISLIKHMSYIGVKPTVHTLNIVINCLCRLSHAVFGFSV 140

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   GV+PS+VTFN I++ LC  G + +A R +D +       +++T   + +G C 
Sbjct: 141 LGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAITNGLCK 200

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A      ME   C  D  +Y+ +++G CK+  V EAL+L+ +M  KGI+P + T
Sbjct: 201 VGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFT 260

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  GL    + + A  L   M R  +  D  T+N       K G I  A  +F  + 
Sbjct: 261 YNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMV 320

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  E D+  Y  +I   C   +++ A+E+F  +  +  + ++VTY  +IHG C    M+
Sbjct: 321 HMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMN 380

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA     +M  N + PNV+ + TLI G  +  KP    EL   M +   +P+    ++++
Sbjct: 381 KAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIIL 440

Query: 374 DLL 376
           D L
Sbjct: 441 DGL 443



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 170/342 (49%), Gaps = 1/342 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TYN +I GLC      +A  L   M  + I PDV T+N +          + AK 
Sbjct: 255 QPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKS 314

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  M+  G++  VVT+  I+   C   +M +A  + DLM+ +   PN  TY++L+ G+C
Sbjct: 315 IFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWC 374

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            T  +N+A    G M + G   + V+++ LI G CK  +   A  L+  M   G  P + 
Sbjct: 375 ETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQ 434

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T   +  GLF+ +    A+ LF E+++ +   +   YN  +DG+C +G + +A+ELF  L
Sbjct: 435 TCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYL 494

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                ++D+  YN +I GLCK G L+ A +L   +       +  TYN+ + GL    Q+
Sbjct: 495 SSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNECTYNVFVQGLLRRYQI 554

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
            K+    + M++     +      LI+ F   NK ++ +E+ 
Sbjct: 555 SKSTKYLMFMKDKGFQADATTTKFLINYF-SANKENRALEVF 595



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 116/228 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY ++I G C+   ++KA     +M    ++P+VVT+++LI G+C A     AK
Sbjct: 359 CLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAK 418

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M   G  P++ T  +I+D L K     EA  L   + + +   N   Y+ ++DG 
Sbjct: 419 ELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGM 478

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +GK+N A ELF  + S G K D V+YNI+I G CK   +++A  L  +M   G  P  
Sbjct: 479 CSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNE 538

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            TYN    GL   +Q+  + K    M+     AD +T    I+    N
Sbjct: 539 CTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQADATTTKFLINYFSAN 586



 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 134/296 (45%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A   + +M+     P V  FN++   + K      A  L+  M    V+P   T + +++
Sbjct: 67  ALDFYHKMVTMKPFPCVKDFNLLFSIVAKMKHYTTAISLIKHMSYIGVKPTVHTLNIVIN 126

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             C          + G M  +G +   V++N ++NG C    V +A+     +   G + 
Sbjct: 127 CLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYES 186

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
              T   +  GL ++     AL   ++M+  +   D + Y+  +DGLCK+G + EA+ LF
Sbjct: 187 DSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLF 246

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +     + D+  YNCLI GLC   R + A  L  ++ R+ ++ DV T+N++       
Sbjct: 247 SQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKT 306

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           G + +A  +F  M    +  +V+ + ++I     +N+    +E+   M  K  +P+
Sbjct: 307 GMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPN 362


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 144/401 (35%), Positives = 205/401 (51%), Gaps = 36/401 (8%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            C P+  TY+TI+D L K G VD A  L   M  +  +P+VVTY+SL+HGLC A   +EA 
Sbjct: 944  CPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEAT 1003

Query: 72   RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             L   M   G  P++VT+N I+D  CK G++DEA  LL+ MV    +PN  TY+ L+D F
Sbjct: 1004 ALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAF 1063

Query: 132  CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            C  GK   A  L   M   G   +  +YN L++ +CK  EVE A  L   M+ KG  P V
Sbjct: 1064 CKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNV 1123

Query: 192  VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            V+YNT+  GL +  +V   + L E+M  ++   D  T+NT ID +CK   +  A ELF  
Sbjct: 1124 VSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNL 1183

Query: 252  LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA-DVVTYNIMIHGLCNDG 310
            +    C  ++  YN L+ GLCKS R + A  L R + R+   + D++TYN +I GLC   
Sbjct: 1184 IQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSK 1243

Query: 311  QMDKAHDLFLDMEENAVAPN-----------------------------------VIIFV 335
            ++D+A+ LFL M  + +AP+                                    I + 
Sbjct: 1244 RVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYG 1303

Query: 336  TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            TLI GF +     K +E+L  +  K   PD    S+ +D L
Sbjct: 1304 TLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWL 1344



 Score =  246 bits (629), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 128/370 (34%), Positives = 203/370 (54%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+   C P++VTYNT+I+GL K   +D A  L  +M      P+V +YN+++HG C AN 
Sbjct: 221 EMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANR 280

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
              A  L  +M+ +G  P VV++  +++ LCK  ++DEA R++D M+QR  +PN  TY T
Sbjct: 281 VENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGT 340

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+DGFC  G ++ A EL   M   G + + ++YN +++ +C+  ++E A  + + M+  G
Sbjct: 341 LVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTG 400

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
             P  + Y+T+  G  +  ++  A  L E+M R     D +  +T ID LCK   I  A 
Sbjct: 401 CPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQ 460

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           EL R    + C  D+ AY+ LI  LCK+ RL  A      + +     DVVTYN ++ GL
Sbjct: 461 ELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGL 520

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C   +++ A  LF  M    V P+V+ +  +IH F + N      ++L +MKE K +PD 
Sbjct: 521 CKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDV 580

Query: 367 SIVSMVVDLL 376
              S +++ L
Sbjct: 581 VTYSALINGL 590



 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 123/368 (33%), Positives = 199/368 (54%), Gaps = 6/368 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V+Y T+I+GLCK   VD+A  +  +M      P+V+TY +L+ G C   D + A 
Sbjct: 296 CPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAV 355

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +M ++G +P+ +T+N IM   C+   M+ A ++L +M+Q    P+A  YST++ GF
Sbjct: 356 ELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGF 415

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+  A +L   M   GC+ D    + LI+  CK   ++ A  L R  +     P V
Sbjct: 416 CKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDV 475

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF-- 249
           V Y+ L   L +  ++  A    + M ++    D  TYN+ +DGLCK+  I +A  LF  
Sbjct: 476 VAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDR 535

Query: 250 -RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            R  G++    D+  Y+ +I   CK   L+ A ++   +     V DVVTY+ +I+GLC 
Sbjct: 536 MRAAGVMP---DVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCK 592

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G +DKA D+F +M     APN++ + TLI G  +INK  +  E+L  M+++   PD+  
Sbjct: 593 AGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSIT 652

Query: 369 VSMVVDLL 376
            + +++ L
Sbjct: 653 YTCLINGL 660



 Score =  233 bits (595), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 118/354 (33%), Positives = 193/354 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN +TY T++DG C+ G +D A  L  +M      P+ +TYN+++H  C  ND   A 
Sbjct: 331 CQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAH 390

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++   M+  G  P  + ++ I+   CK GK+ EA  LL+ M++R  RP+    STL+D  
Sbjct: 391 QVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDAL 450

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    I+ A+EL      M C  D V+Y+ILI+  CK K + EA S    MV     P V
Sbjct: 451 CKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDV 510

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN++  GL +  ++  A  LF+ M+   V  D  TY+  I   CK+  +  A ++   
Sbjct: 511 VTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLER 570

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   KC  D+  Y+ LI+GLCK+G ++ A ++F+ +       ++VTYN +I GLC   +
Sbjct: 571 MKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINK 630

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +++A ++   M + +  P+ I +  LI+G    ++  +   +L +MK+K  +PD
Sbjct: 631 VEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPD 684



 Score =  227 bits (579), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 132/404 (32%), Positives = 203/404 (50%), Gaps = 37/404 (9%)

Query: 10   VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
            + C PN  T+  +I GLC+ G +  A  L  +M    +  +V+ +N +I GLC A   + 
Sbjct: 871  LCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDS 930

Query: 70   AKRLFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A  LF EM + G   P V T++ I+D L K+GK+D+A RL++ MV +   PN  TYS+L+
Sbjct: 931  ALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLL 990

Query: 129  DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
             G C  GK++ A  L   M   GC  + V+YN +I+G+CK   ++EA  L  EMV  G +
Sbjct: 991  HGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQ 1050

Query: 189  PTVVTYNTLF------------LGLFEI-----------------------HQVEHALKL 213
            P VVTY  L             +GL E+                        +VE A +L
Sbjct: 1051 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQL 1110

Query: 214  FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
               M +     +  +YNT I GLCK   + E V L   +    C  DI  +N +ID +CK
Sbjct: 1111 LSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCK 1170

Query: 274  SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM-EENAVAPNVI 332
            + R++IA ELF  +       ++VTYN ++HGLC   + D+A  L  +M  +   +P++I
Sbjct: 1171 TYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDII 1230

Query: 333  IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             + T+I G  +  +  +  +L  +M    + PD    S+V+  L
Sbjct: 1231 TYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSL 1274



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 195/394 (49%), Gaps = 36/394 (9%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +TVTY+T+I G  + G +  A  LF +M  + +      + S++ GLC A   ++A  L 
Sbjct: 160 DTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAV-LH 218

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
           F  M +   P  VT+N +++ L K+ ++D+A RLL+ MV     PN F+Y+T++ GFC  
Sbjct: 219 FREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKA 278

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            ++  A  L   M + GC  D VSY  +ING CK  +V+EA  +  +M+ +G +P V+TY
Sbjct: 279 NRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITY 338

Query: 195 NTLFLGLFEIHQVEHALKLFEEM--------------------QRDDV------------ 222
            TL  G   +  ++ A++L  +M                    +R+D+            
Sbjct: 339 GTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQ 398

Query: 223 ---AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
                D   Y+T I G CK G + EA +L   +    C  D+   + LID LCK+  ++ 
Sbjct: 399 TGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDS 458

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A EL R         DVV Y+I+IH LC   ++ +A      M +N   P+V+ + +++ 
Sbjct: 459 AQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVD 518

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           G  +  + +    L  +M+   VMPD    S+V+
Sbjct: 519 GLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVI 552



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 105/312 (33%), Positives = 163/312 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ + Y+TII G CK G + +A  L  QM      PDV   ++LI  LC A   + A+
Sbjct: 401 CPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQ 460

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L    +     P VV +++++  LCK  ++ EA   LD+MV+    P+  TY++++DG 
Sbjct: 461 ELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGL 520

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C + +IN A  LF  M + G   D V+Y+I+I+ +CK+  ++ A  +   M      P V
Sbjct: 521 CKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDV 580

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+ L  GL +   V+ A  +F+EM     A +  TYNT IDGLCK   + +A E+   
Sbjct: 581 VTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEI 640

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  D   Y CLI+GLC + RLE A  + R +  +  + D +TY  ++  L     
Sbjct: 641 MRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNN 700

Query: 312 MDKAHDLFLDME 323
           ++    L  +ME
Sbjct: 701 LELVEQLLKEME 712



 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 198/384 (51%), Gaps = 23/384 (5%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNEA 70
            C PN VTYN+++ GLCK    D+A+ L  +M + +  +PD++TYN++I GLC +   + A
Sbjct: 1189 CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 1248

Query: 71   KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             +LF +M+  G+ P  VT+++++  LCK   MDEA+ +L+LM++    P A TY TL+DG
Sbjct: 1249 YKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDG 1308

Query: 131  FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            FC TG +++A E+   + S G   D V+++I I+   K   + +A  L   M+  G+ P 
Sbjct: 1309 FCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPD 1368

Query: 191  VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC-KNGYIVEAVELF 249
             VTYNTL  G  +    E A+ LFE M++     D +TY T +  L  K  Y     E+ 
Sbjct: 1369 TVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVS 1428

Query: 250  RTL----------------GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
            +++                  ++ E D++    ++D   K G  + A ++F  + +R   
Sbjct: 1429 KSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQR--- 1485

Query: 294  ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN-KPSKVIE 352
             +VV ++ M+       Q ++A  L+  M    V P+ + F++L+          + V E
Sbjct: 1486 -NVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDE 1544

Query: 353  LLHKMKEKKVMPDASIVSMVVDLL 376
             +   ++  + P     S V+DLL
Sbjct: 1545 FVSISRDYGLEPGVDHFSCVIDLL 1568



 Score =  177 bits (449), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 170/322 (52%), Gaps = 1/322 (0%)

Query: 55  NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
           N L++ L  A+ +++A  LF   ++       VT++ ++    + GK+  A  L D M +
Sbjct: 130 NCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNR 189

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
           + ++ +A  + +++ G C  G+ + A   F  M S  C  D V+YN +ING  K+  +++
Sbjct: 190 KGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRLDD 248

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           A+ L  EMV  G  P V +YNT+  G  + ++VE+AL L E+M       D  +Y T I+
Sbjct: 249 AIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVIN 308

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
           GLCK   + EA  +   +    C+ ++  Y  L+DG C+ G L+ A+EL R +  R    
Sbjct: 309 GLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRP 368

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           + +TYN ++H  C    M++AH +   M +    P+ I + T+I GF +  K  +  +LL
Sbjct: 369 NAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLL 428

Query: 355 HKMKEKKVMPDASIVSMVVDLL 376
            +M  +   PD + +S ++D L
Sbjct: 429 EQMIRRGCRPDVACLSTLIDAL 450



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 173/348 (49%), Gaps = 9/348 (2%)

Query: 30   GFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTF 89
            GF D A +       E  N D  T N L+  L       +A +++   +     P++ TF
Sbjct: 829  GFFDWATS------QEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKL--CCSPNMFTF 880

Query: 90   NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
             +++  LC+ G +  A  LL  M +  V  N   ++ ++ G C   K++ A ELF  ME 
Sbjct: 881  TILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEE 940

Query: 150  MG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 208
             G C  D  +Y+ +++   K+ +V++A  L  +MVSKG  P VVTY++L  GL +  +++
Sbjct: 941  SGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLD 1000

Query: 209  HALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLI 268
             A  L + M R   + +  TYNT IDG CK G I EA  L   +    C+ ++  Y  L+
Sbjct: 1001 EATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLL 1060

Query: 269  DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVA 328
            D  CK G+ E A+ L   +  +  V ++ TYN ++   C   ++++A  L   M +    
Sbjct: 1061 DAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCV 1120

Query: 329  PNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            PNV+ + T+I G  +  K  + + LL +M     +PD    + ++D +
Sbjct: 1121 PNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAM 1168



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 81/233 (34%), Positives = 126/233 (54%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            IG+ C P+ V Y+ +I  LCK   + +A++    M      PDVVTYNS++ GLC +  
Sbjct: 466 SIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRR 525

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            N+A  LF  M   GV P VVT+++++   CK+  +D A ++L+ M +    P+  TYS 
Sbjct: 526 INDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSA 585

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L++G C  G +++A ++F  M   GC  + V+YN LI+G CK  +VE+A  +   M  + 
Sbjct: 586 LINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQS 645

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
             P  +TY  L  GL    ++E A ++  EM+      D  TY T +  L K 
Sbjct: 646 CTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKT 698



 Score =  154 bits (388), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 167/357 (46%), Gaps = 1/357 (0%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N +++ L K     +A  LF          D VTY++LI G   A     A  LF EM  
Sbjct: 130 NCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNR 189

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
           +G++        I+  LC  G+  +A      M  +   P++ TY+T+++G   + +++ 
Sbjct: 190 KGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRLDD 248

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A  L   M   G   +  SYN +++G+CK   VE AL L  +MV++G  P VV+Y T+  
Sbjct: 249 AIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVIN 308

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           GL ++ QV+ A ++ ++M +     +  TY T +DG C+ G +  AVEL R +       
Sbjct: 309 GLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRP 368

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           +   YN ++   C+   +E A ++ + + +     D + Y+ +I G C  G++ +AHDL 
Sbjct: 369 NAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLL 428

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             M      P+V    TLI    +        ELL         PD    S+++  L
Sbjct: 429 EQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHAL 485



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 34/250 (13%)

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G +H+    N L+N   K  +  +A  L+R  +        VTY+TL  G     ++  A
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180

Query: 211 LKLFEEMQRDDVAA----------------------------------DTSTYNTFIDGL 236
            +LF+EM R  + A                                  D+ TYNT I+GL
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGL 240

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
            K+  + +A+ L   +       ++ +YN ++ G CK+ R+E AL L   +  R    DV
Sbjct: 241 SKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDV 300

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           V+Y  +I+GLC   Q+D+A  +   M +    PNVI + TL+ GF R+      +EL+ K
Sbjct: 301 VSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRK 360

Query: 357 MKEKKVMPDA 366
           M E+   P+A
Sbjct: 361 MTERGYRPNA 370



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 77/138 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY+ +I+GLCK G VDKA  +F +M G    P++VTYN+LI GLC  N   +A 
Sbjct: 576 CVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAA 635

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   M  Q   P  +T+  +++ LC   +++EA R+L  M  +   P+  TY TL+   
Sbjct: 636 EMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRAL 695

Query: 132 CLTGKINRAEELFGSMES 149
             T  +   E+L   ME+
Sbjct: 696 QKTNNLELVEQLLKEMEA 713



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 33   DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM-MDQGVQPSVVTFNV 91
            ++A  L+  M  E + PD VT+ SL+   CHA   + A   F  +  D G++P V  F+ 
Sbjct: 1504 EQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSC 1563

Query: 92   IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
            ++D L + G ++EA    DLM+    +P+A T++ L+  + + G   RA
Sbjct: 1564 VIDLLGRLGLVNEAE---DLMLGMPCKPSAATWNCLLSAYKICGDFERA 1609


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  248 bits (632), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 134/364 (36%), Positives = 207/364 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY T+I  LC+ G +D A   F QM  + + PD   YN LI G C      +AK 
Sbjct: 429 KPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKE 488

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  E+M+ G+   +V F+ I++ LCK G++ +A  + DL V   + P+A  Y+ LMDG+C
Sbjct: 489 LISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYC 548

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK+ +A  +F +M S G + + V Y  L+NGYCK   ++E LSL+REM+ +GIKP+ +
Sbjct: 549 LVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTI 608

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ +  GLFE  +   A   F EM    +A D  TYN  + GL KN    EA+ LF+ L
Sbjct: 609 LYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKEL 668

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  +++I   N +IDG+ ++ R+E A +LF S+ R  LV  VVTY+IMI  L  +G +
Sbjct: 669 RAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLV 728

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A D+F  M+     PN  +   ++   ++ N+  +    L K+ E+    +     ++
Sbjct: 729 EEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLL 788

Query: 373 VDLL 376
           VDL 
Sbjct: 789 VDLF 792



 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 134/406 (33%), Positives = 209/406 (51%), Gaps = 35/406 (8%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
            E G VC PN V YNT+IDG  KEG V+KA  LF +M    I PD+VTYNS++H LC A 
Sbjct: 212 AEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKAR 271

Query: 66  -----------------------------------DWNEAKRLFFEMMDQGVQPSVVTFN 90
                                               W EA R+F EM    + P VVT +
Sbjct: 272 AMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLS 331

Query: 91  VIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
           ++M  LCK GK+ EA  + D M  +   P+ F+Y+ +++G+   G +    +LF  M   
Sbjct: 332 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD 391

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G   D  ++N+LI  Y     +++A+ ++ EM   G+KP VVTY T+   L  I +++ A
Sbjct: 392 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 451

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           ++ F +M    VA D   YN  I G C +G +++A EL   +      LDI  ++ +I+ 
Sbjct: 452 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 511

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LCK GR+  A  +F       L  D V YN+++ G C  G+M+KA  +F  M    + PN
Sbjct: 512 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 571

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           V+ + TL++G+ +I +  + + L  +M ++ + P   + S+++D L
Sbjct: 572 VVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 617



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 186/402 (46%), Gaps = 38/402 (9%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           V  P + TY  ++D   +    + A A F Q+    +  +++  N L+ G C A   +EA
Sbjct: 109 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEA 168

Query: 71  KRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV--RPNAFTYSTL 127
             +      + G  P V ++++++  LC  GK  +A  LL +M +      PN   Y+T+
Sbjct: 169 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTV 228

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DGF   G +N+A +LF  M   G   D V+YN +++  CK + +++A +  R+MV+K +
Sbjct: 229 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRV 288

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P   TYN L  G     Q + A+++F+EM+R  +  D  T +  +  LCK G I EA +
Sbjct: 289 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 348

Query: 248 LFRTLGILKCELDIQAYN----------CLID-------------------------GLC 272
           +F T+ +     D+ +YN          CL+D                            
Sbjct: 349 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYA 408

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
             G L+ A+ +F  +    +  DVVTY  +I  LC  G+MD A + F  M +  VAP+  
Sbjct: 409 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 468

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +  LI GF       K  EL+ ++    +  D    S +++
Sbjct: 469 AYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 510



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 167/336 (49%), Gaps = 9/336 (2%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           ++P   TY  L+     A+    A   F +++  G++ +++  N +++  C+  + DEA 
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEA- 168

Query: 107 RLLDLMVQRDVR----PNAFTYSTLMDGFCLTGKINRAEELFGSMESMG--CKHDDVSYN 160
             LD+++ R       P+ F+YS L+   C  GK  +A++L   M   G  C  + V+YN
Sbjct: 169 --LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 226

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            +I+G+ K  +V +A  L++EMV +GI P +VTYN++   L +   ++ A     +M   
Sbjct: 227 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 286

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            V  +  TYN  I G    G   EAV +F+ +       D+   + L+  LCK G+++ A
Sbjct: 287 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 346

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            ++F ++  +    DV +YNIM++G    G +    DLF  M  + +AP+   F  LI  
Sbjct: 347 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKA 406

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +       K + + ++M++  V PD      V+  L
Sbjct: 407 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 442



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 126/266 (47%), Gaps = 35/266 (13%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V   P+ V YN ++DG C  G ++KA  +F  M    I P+VV Y +L++G C     
Sbjct: 529 VNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRI 588

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +E   LF EM+ +G++PS + +++I                                   
Sbjct: 589 DEGLSLFREMLQRGIKPSTILYSII----------------------------------- 613

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DG    G+   A+  F  M   G   D  +YNI++ G  KN+  +EA+ L++E+ +  +
Sbjct: 614 IDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNV 673

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           K  ++T NT+  G+F+  +VE A  LF  + R  +     TY+  I  L K G + EA +
Sbjct: 674 KINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAED 733

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCK 273
           +F ++    CE + +  N ++  L K
Sbjct: 734 MFSSMQNAGCEPNSRLLNHVVRELLK 759



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 113/237 (47%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V Y T+++G CK G +D+  +LF +M    I P  + Y+ +I GL  A     AK 
Sbjct: 569 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKM 628

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM + G+   + T+N+++  L KN   DEA  L   +   +V+ N  T +T++DG  
Sbjct: 629 KFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMF 688

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            T ++  A++LF S+         V+Y+I+I    K   VEEA  ++  M + G +P   
Sbjct: 689 QTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSR 748

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             N +   L + +++  A     ++   + + +  T    +D     G   E +   
Sbjct: 749 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 805



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 124/289 (42%), Gaps = 38/289 (13%)

Query: 115 RDVRPNAFTYSTLMD-----------------------------------GFCLTGKINR 139
           R + P + TY+ LMD                                   GFC   + + 
Sbjct: 108 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 167

Query: 140 AEE-LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI--KPTVVTYNT 196
           A + L      +GC  D  SY+IL+   C   +  +A  L R M   G    P VV YNT
Sbjct: 168 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 227

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  G F+   V  A  LF+EM +  +  D  TYN+ +  LCK   + +A    R +   +
Sbjct: 228 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 287

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              +   YN LI G   +G+ + A+ +F+ + R  ++ DVVT ++++  LC  G++ +A 
Sbjct: 288 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 347

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           D+F  M      P+V  +  +++G+        + +L   M    + PD
Sbjct: 348 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 396


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  248 bits (632), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 138/359 (38%), Positives = 192/359 (53%), Gaps = 1/359 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNTVTYNTII  LCKE  V++A  L L + G+ I PDV TYNSLI GLC + +   A 
Sbjct: 367 CSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAM 426

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L+ EM  +G  P   T+N+++D LC  GK+ EA  LL  M       N  TY+TL+DGF
Sbjct: 427 ELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGF 486

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +I  AEE+F  ME  G   + V+YN LI+G CK++ VEEA  L  +M+ +G++P  
Sbjct: 487 CKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDK 546

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN+L     +   ++ A  + + M  D    D  TY T I GLCK G +  A +L RT
Sbjct: 547 FTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRT 606

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN-DG 310
           + +    L   AYN +I  L +  R + A+ LFR +  +    D VTY I+  GLC   G
Sbjct: 607 IQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGG 666

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            + +A D  ++M E    P    F  L  G   +     +I+L+  + EK    D  + 
Sbjct: 667 PIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKAKFSDNEVT 725



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 125/364 (34%), Positives = 199/364 (54%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN++I GLCK G VD+A  +  QM   + +P+ VTYN++I  LC  N   EA +L
Sbjct: 334 PDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKL 393

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              +  +G+ P V T+N ++  LC +     A  L   M  +   P+ FTY+ L+D  C 
Sbjct: 394 ALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCF 453

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A  L   ME  GC  + ++YN LI+G+CKNK + EA  ++ +M  +G+    VT
Sbjct: 454 RGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVT 513

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL +  +VE A +L ++M  + +  D  TYN+ +   CK G I +A ++ +T+ 
Sbjct: 514 YNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMA 573

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              CE DI  Y  LI GLCK+GR+E A +L R++  + +      YN +I  L    +  
Sbjct: 574 SDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSK 633

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP-SKVIELLHKMKEKKVMPDASIVSMV 372
           +A  LF +M E A AP+ + +  +  G  +   P  + ++ + +M E+  +P+ S   M+
Sbjct: 634 EAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYML 693

Query: 373 VDLL 376
            + L
Sbjct: 694 AEGL 697



 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 201/359 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+N +++GL K G V  A  +   M  E  +PD+ TYNSLI GLC   + +EA ++
Sbjct: 299 PDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKV 358

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+++   P+ VT+N I+  LCK  +++EA++L  ++  + + P+  TY++L+ G CL
Sbjct: 359 LNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCL 418

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +     A EL+  M++ GC  D+ +YN+LI+  C   +++EAL+L +EM   G    V+T
Sbjct: 419 SRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVIT 478

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G  +  ++  A ++F++M+   V+ ++ TYNT IDGLCK+  + EA +L   + 
Sbjct: 479 YNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMI 538

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +     D   YN L+   CK+G ++ A ++ +++       D+VTY  +I GLC  G+++
Sbjct: 539 MEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVE 598

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            A  L   ++   +      +  +I    R  +  + + L  +M EK   PDA    +V
Sbjct: 599 AATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIV 657



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/339 (33%), Positives = 177/339 (52%), Gaps = 1/339 (0%)

Query: 25  GLCKEGFVDKAKALFLQMK-GENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQ 83
           G CKEG +++A     +M   E   PD  T+N L++GL        A  +   M+ +G  
Sbjct: 274 GFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFD 333

Query: 84  PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEEL 143
           P + T+N ++  LCK G++DEA ++L+ M++RD  PN  TY+T++   C   ++  A +L
Sbjct: 334 PDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKL 393

Query: 144 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 203
              +   G   D  +YN LI G C ++    A+ LY+EM +KG  P   TYN L   L  
Sbjct: 394 ALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCF 453

Query: 204 IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQA 263
             +++ AL L +EM+    A +  TYNT IDG CKN  I EA E+F  + +     +   
Sbjct: 454 RGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVT 513

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
           YN LIDGLCKS R+E A +L   +    L  D  TYN ++   C  G + KA D+   M 
Sbjct: 514 YNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMA 573

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
            +   P+++ + TLI G  +  +     +LL  ++ K +
Sbjct: 574 SDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGI 612



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 182/353 (51%), Gaps = 1/353 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+ TI+ G  +EG +D A  +  QM         VT N L++G C      EA R 
Sbjct: 228 PDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRF 287

Query: 74  FFEM-MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             EM + +G  P   TFN++++ L K G +  A  ++D+M++    P+ +TY++L+ G C
Sbjct: 288 IEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLC 347

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ A ++   M    C  + V+YN +I+  CK  +VEEA  L   +  KGI P V 
Sbjct: 348 KLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVC 407

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  GL        A++L++EM+      D  TYN  ID LC  G + EA+ L + +
Sbjct: 408 TYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEM 467

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +  C  ++  YN LIDG CK+ R+  A E+F  +  + +  + VTYN +I GLC   ++
Sbjct: 468 EVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERV 527

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++A  L   M    + P+   + +L+  F +     K  +++  M      PD
Sbjct: 528 EEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPD 580



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 181/362 (50%), Gaps = 42/362 (11%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           YN L++ L   N     +     M+ +G++P V TFN+++  LC+  ++  A  L++ M 
Sbjct: 163 YNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEME 222

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
              + P+  T++T+M GF   G ++ A  +   M   GC   +V+ N+L+NG+CK   +E
Sbjct: 223 DFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIE 282

Query: 174 EALSLYRE------------------------------------MVSKGIKPTVVTYNTL 197
           EAL    E                                    M+ +G  P + TYN+L
Sbjct: 283 EALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSL 342

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GI 254
             GL ++ +V+ A+K+  +M   D + +T TYNT I  LCK   + EA +L   L   GI
Sbjct: 343 ISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGI 402

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L    D+  YN LI GLC S    +A+EL++ +  +    D  TYN++I  LC  G++ +
Sbjct: 403 LP---DVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQE 459

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A +L  +ME +  A NVI + TLI GF +  + ++  E+  +M+ + V  ++   + ++D
Sbjct: 460 ALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLID 519

Query: 375 LL 376
            L
Sbjct: 520 GL 521



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 178/369 (48%), Gaps = 8/369 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSL---IHGLCHANDWNE 69
           KP++  +  ++  L K G  D  K +  +MK   I+  V+  +SL   I        +NE
Sbjct: 86  KPSSSIFKEVLHKLGKAGEFDAMKDILKEMK---ISLSVIDNDSLLVFIESYASFGLYNE 142

Query: 70  AKRLFFEM-MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
             +    M ++ GV  +   +N +++ L    K+         MV R +RP+  T++ L+
Sbjct: 143 ILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILI 202

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
              C   +I  A  L   ME  G   D+ ++  ++ G+ +   ++ A+ +  +MV  G  
Sbjct: 203 KALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCV 262

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQ-RDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            T VT N L  G  +  ++E AL+  EEM  R+    D  T+N  ++GL K G++  A+E
Sbjct: 263 VTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALE 322

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +   +     + DI  YN LI GLCK G ++ A+++   +  R    + VTYN +I  LC
Sbjct: 323 VMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLC 382

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            + Q+++A  L L +    + P+V  + +LI G       +  +EL  +MK K   PD  
Sbjct: 383 KENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEF 442

Query: 368 IVSMVVDLL 376
             +M++D L
Sbjct: 443 TYNMLIDSL 451


>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 567

 Score =  248 bits (632), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 140/368 (38%), Positives = 206/368 (55%), Gaps = 4/368 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC-HANDWNEAK 71
           +PN V YN I+DGLCK G V +A  LF +M   N+ P+VVTYN LI GLC     W E  
Sbjct: 185 EPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLCGEVGGWREGV 244

Query: 72  RLFFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            LF EM+ ++G+ P V TF+++++  CK G +  A  ++  M++  V  N  TY++L+ G
Sbjct: 245 GLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISG 304

Query: 131 FCLTGKINRAEELFGSM--ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +CL  ++  A  +F  M  E  GC    V+YN LI+G+CK K+V +A+SL  EMV KG+ 
Sbjct: 305 YCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLD 364

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P V T+ +L  G FE+ +   A +LF  M+         T    +DGL K     EA+ L
Sbjct: 365 PDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTL 424

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           FR +     +LDI  YN ++DG+CK G+L  A +L   +  + L  D  T+NIMI GLC 
Sbjct: 425 FRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCR 484

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           +G +D A +L   M+EN   PN   +   + G +R    S+  + L  MK+K    DA+ 
Sbjct: 485 EGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFPVDATT 544

Query: 369 VSMVVDLL 376
             +++  L
Sbjct: 545 AELLIRFL 552



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 170/348 (48%), Gaps = 11/348 (3%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQ-PSVVTFNVIMDEL 96
            F +M   N  P +  +N L   +  +  +  A  L   +   G +   V T N++++ L
Sbjct: 63  FFHRMLTLNPFPCIQDFNLLFGIVAKSQHFATAISLIKTLHSLGYEIADVCTLNILINCL 122

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM------ 150
           C+  K      +L LM +  + P   T +T+ +G C+   + +  +  G++ES+      
Sbjct: 123 CRLRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGLCIVNGLCKIGDTSGALESLKKMVKR 182

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF-EIHQVEH 209
             + + V YN +++G CK   V EAL L+ EM    ++P VVTYN L  GL  E+     
Sbjct: 183 NLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLCGEVGGWRE 242

Query: 210 ALKLFEEM-QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLI 268
            + LF EM     +  D  T++  ++G CK G ++ A  +   +  +  EL++  YN LI
Sbjct: 243 GVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLI 302

Query: 269 DGLCKSGRLEIALELFRSLPR--RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
            G C   R+E A+ +F  + R     +  VVTYN +IHG C   +++KA  L  +M    
Sbjct: 303 SGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKG 362

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + P+V  + +LI GF  + KP    EL   MK++  +P     ++V+D
Sbjct: 363 LDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLD 410



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 113/228 (49%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYN++I G CK   V+KA +L  +M G+ ++PDV T+ SLI G         AK
Sbjct: 328 CLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAK 387

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M DQG  P + T  V++D L K     EA  L   M +  +  +   Y+ ++DG 
Sbjct: 388 ELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGM 447

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+N A +L   +   G K D  ++NI+I G C+   +++A  L R+M   G  P  
Sbjct: 448 CKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMKENGCPPNK 507

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            +YN    GL   + +  + K  + M+      D +T    I  L  N
Sbjct: 508 CSYNVFVQGLLRKYDISRSRKYLQIMKDKGFPVDATTAELLIRFLSAN 555


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  247 bits (630), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 130/365 (35%), Positives = 211/365 (57%), Gaps = 1/365 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTY+T+I   C+ G +  A   F QM    + P+ V Y+SLIHG C   D  +AK 
Sbjct: 471 RPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKE 530

Query: 73  LFFEMMDQGV-QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           L  EMM +G+ +P++V F+ I+  LC  G++ +A  + +L++    RP   T+++L+DG+
Sbjct: 531 LVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGY 590

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL GK+ +A  +  +M S+G + D V+YN L++GYCK+ ++++ L L+REM+ K +KPT 
Sbjct: 591 CLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTT 650

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+ +  GLF   +   A K+F EM     A D  TY   + GLC+N    EA+ LF  
Sbjct: 651 VTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHK 710

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           LG + C+ DI   N +I+ L K  R E A +LF ++    LV +V TY +MIH L  +G 
Sbjct: 711 LGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGS 770

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A  +F  ME++  AP+  +   +I   ++     K    + K+    +  +AS  S+
Sbjct: 771 VEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSL 830

Query: 372 VVDLL 376
           ++ L 
Sbjct: 831 LMSLF 835



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 117/367 (31%), Positives = 200/367 (54%), Gaps = 5/367 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTYN+I+D LCK   +DKA+ +  QM  + + PD +TY ++IHG   +  W E+ +
Sbjct: 296 EPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAK 355

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +M  +G+ P +VTFN  M  LCK+G+  +A  +   M  +   P+  +YS L+ G+ 
Sbjct: 356 MFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYA 415

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+      LF SM   G   +   +NILI+ + K   ++EA+ ++ EM  +G++P VV
Sbjct: 416 TEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVV 475

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+TL      + ++  A++ F +M    +  +T  Y++ I G C +G +V+A EL   +
Sbjct: 476 TYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEM 535

Query: 253 ---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
              GI +   +I  ++ +I  LC  GR+  A ++F  +        +VT+N +I G C  
Sbjct: 536 MSKGIPR--PNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLV 593

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G+M+KA  +   M    + P+V+ + TL+ G+ +  K    + L  +M  KKV P     
Sbjct: 594 GKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTY 653

Query: 370 SMVVDLL 376
           S+V+D L
Sbjct: 654 SIVLDGL 660



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 188/362 (51%), Gaps = 9/362 (2%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C P+ V++NT+I G  K+G V KA  L  +M  + + PDVVTYNS++  LC A   +
Sbjct: 257 GGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMD 316

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A+ +  +M+D+GV+P  +T+  I+     +G   E++++   M  + + P   T+++ M
Sbjct: 317 KAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFM 376

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
              C  G+   AEE+F  M + G   D VSY+IL++GY       +  +L+  M  KGI 
Sbjct: 377 SSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIV 436

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
                +N L     +   ++ A+ +F EMQ   V  D  TY+T I   C+ G + +A+E 
Sbjct: 437 ANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEK 496

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF-----RSLPRRVLVADVVTYNIMI 303
           F  +  +  E +   Y+ LI G C  G L  A EL      + +PR     ++V ++ +I
Sbjct: 497 FSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPR----PNIVFFSSII 552

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           H LCN+G++  AHD+F  +      P ++ F +LI G+  + K  K   +L  M    + 
Sbjct: 553 HSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIE 612

Query: 364 PD 365
           PD
Sbjct: 613 PD 614



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 156/309 (50%), Gaps = 1/309 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENI-NPDVVTYNSLIHGLCHAND 66
           I +  +PNTV Y+++I G C  G + KAK L  +M  + I  P++V ++S+IH LC+   
Sbjct: 501 ISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGR 560

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A  +F  ++  G +P++VTFN ++D  C  GKM++A  +LD MV   + P+  TY+T
Sbjct: 561 VMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNT 620

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ G+C +GKI+    LF  M     K   V+Y+I+++G         A  ++ EM+  G
Sbjct: 621 LVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSG 680

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
               + TY  L  GL      + A+ LF ++   D   D +  NT I+ L K     EA 
Sbjct: 681 TAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEAN 740

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +LF  +       ++  Y  +I  L K G +E A  +F S+ +          N +I  L
Sbjct: 741 DLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRML 800

Query: 307 CNDGQMDKA 315
              G + KA
Sbjct: 801 LQKGDIVKA 809



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 163/346 (47%), Gaps = 8/346 (2%)

Query: 37  ALFLQMKGENINPDVV-----TYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           ALF ++  E   P V      TY  L+   C A   +     F  ++  G++   +  N 
Sbjct: 137 ALFNRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANT 196

Query: 92  IMDELCKNGKMDEA-SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
            +  LC   + DEA   LL  M      PNA +Y+T++   C   +   A ++   M   
Sbjct: 197 FLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKE 256

Query: 151 G--CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 208
           G  C  D VS+N +I+G+ K  EV +A +L  EMV KG++P VVTYN++   L +   ++
Sbjct: 257 GGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMD 316

Query: 209 HALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLI 268
            A  +  +M    V  D  TY   I G   +G+  E+ ++FR +        I  +N  +
Sbjct: 317 KAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFM 376

Query: 269 DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVA 328
             LCK GR + A E+F+ +  +  + D+V+Y+I++HG   +G+    ++LF  M +  + 
Sbjct: 377 SSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIV 436

Query: 329 PNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            N   F  LI    +     + + +  +M+ + V PD    S ++ 
Sbjct: 437 ANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLIS 482



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 87/228 (38%), Gaps = 55/228 (24%)

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL--------CKNGYIVEAVELFRT 251
           G F      H   LF+E+ R          N F+  L        C NG  +  + LF  
Sbjct: 86  GTFSTDDAHH---LFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNGPAL-VLALFNR 141

Query: 252 L-----GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL-------------- 292
           +     G     L +  Y  L+D  C++ R ++    F  L R  L              
Sbjct: 142 ICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCL 201

Query: 293 ----------------------VADVVTYNIMIHGLCNDGQMDKAHDLFLDM--EENAVA 328
                                 V + ++YN +I  LC D +  +A D+   M  E    +
Sbjct: 202 CHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCS 261

Query: 329 PNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           P+V+ F T+IHGF +  + SK   L+++M +K V PD    + +VD L
Sbjct: 262 PDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDAL 309



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 54/125 (43%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CK +    NT+I+ L K    ++A  LF  +    + P+V TY  +IH L       EA 
Sbjct: 716 CKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEAD 775

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M   G  PS    N I+  L + G + +A   +  +    +   A T S LM  F
Sbjct: 776 TMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLF 835

Query: 132 CLTGK 136
              GK
Sbjct: 836 SSKGK 840


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  247 bits (630), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 131/365 (35%), Positives = 205/365 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYNT+I+G CK G +D+A  LF QM   + +PDV TYN LI G C      +  
Sbjct: 267 CAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGA 326

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  EM+  G +P+ +T+N +MD L K+GK  +A  L  +M++RD +P+ FT++ ++D F
Sbjct: 327 KLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMF 386

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A ELF  M   GC  D  +YNI+I+G C+   +++A  L   M   G  P V
Sbjct: 387 CKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDV 446

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN++  GL +  QV+ A +++E ++      D  T +T IDGLCK+  + +A +L R 
Sbjct: 447 VTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLRE 506

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D+ AY  LI G CK+ +L+ +L  F  +  +  V  V+TY+I+I  LC   +
Sbjct: 507 MERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSAR 566

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +     L   M E  V P+ I++ ++I G  + +   +  EL   MK+    P     ++
Sbjct: 567 VRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNV 626

Query: 372 VVDLL 376
           +VD L
Sbjct: 627 LVDKL 631



 Score =  234 bits (597), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 132/401 (32%), Positives = 208/401 (51%), Gaps = 36/401 (8%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +C P+++TY+T+I+G CK     +A  L  +M+   I P    YN++I GLC  N   ++
Sbjct: 162 LCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCD-NGRVDS 220

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             + +  M +   PSV+T+ +++D LCK+ ++ +AS +L+ M++    PN  TY+TL++G
Sbjct: 221 ALVHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLING 280

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC  G ++ A  LF  M    C  D  +YNILI+GYCK +  ++   L +EMV  G +P 
Sbjct: 281 FCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPN 340

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            +TYNTL   L +  +   A  L + M R D      T+N  ID  CK G +  A ELF+
Sbjct: 341 FITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQ 400

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C  DI  YN +I G C++ R++ A +L   +       DVVTYN ++ GLC   
Sbjct: 401 LMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKAS 460

Query: 311 QMDKAHDL---------FLD--------------------------MEENAVAPNVIIFV 335
           Q+D+A+++         FLD                          ME N  AP+V+ + 
Sbjct: 461 QVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYT 520

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            LIHGF + ++  K +    +M +K  +P     S+V+D L
Sbjct: 521 ILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKL 561



 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 125/365 (34%), Positives = 192/365 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY  ++D LCK   +  A  +   M      P+VVTYN+LI+G C   + +EA 
Sbjct: 232 CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAV 291

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF +M++    P V T+N+++D  CK  +  + ++LL  MV+    PN  TY+TLMD  
Sbjct: 292 VLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSL 351

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
             +GK   A  L   M    CK    ++N++I+ +CK  +++ A  L++ M  +G  P +
Sbjct: 352 VKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDI 411

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN +  G    ++++ A +L E M       D  TYN+ + GLCK   + EA E++  
Sbjct: 412 YTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEV 471

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L      LD+   + LIDGLCKS RL+ A +L R + R     DVV Y I+IHG C   Q
Sbjct: 472 LRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQ 531

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +DK+   F +M +    P VI +  +I    +  +      LL  M E+ V PDA + + 
Sbjct: 532 LDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTS 591

Query: 372 VVDLL 376
           V+D L
Sbjct: 592 VIDGL 596



 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/357 (34%), Positives = 187/357 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+  T+N +ID  CK G +D A  LF  M      PD+ TYN +I G C AN  ++A+
Sbjct: 372 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDAR 431

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M + G  P VVT+N I+  LCK  ++DEA  + +++       +  T STL+DG 
Sbjct: 432 QLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGL 491

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C + +++ AE+L   ME  G   D V+Y ILI+G+CK  +++++L+ + EM+ KG  PTV
Sbjct: 492 CKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTV 551

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY+ +   L +  +V     L + M    V  D   Y + IDGLCK+    EA EL++ 
Sbjct: 552 ITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKL 611

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C   +  YN L+D LCK  RL+ A+ L   +     + D VTYN +  G     +
Sbjct: 612 MKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAE 671

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            DKA  LF  M+    +P   ++  L+   V   K  + +E+  +  E     D  I
Sbjct: 672 HDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEI 728



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 188/363 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TYN +IDG CK+        L  +M      P+ +TYN+L+  L  +  + +A 
Sbjct: 302 CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAF 361

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M+ +  +PS  TFN+++D  CK G++D A  L  LM  R   P+ +TY+ ++ G 
Sbjct: 362 NLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGA 421

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +I+ A +L   M   GC  D V+YN +++G CK  +V+EA  +Y  + + G    V
Sbjct: 422 CRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDV 481

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT +TL  GL +  +++ A KL  EM+R+  A D   Y   I G CK   + +++  F  
Sbjct: 482 VTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSE 541

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C   +  Y+ +ID LCKS R+     L +++  R +  D + Y  +I GLC    
Sbjct: 542 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDS 601

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D+A++L+  M++   AP V+ +  L+    ++++  + I LL  M+    +PD    + 
Sbjct: 602 YDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNS 661

Query: 372 VVD 374
           V D
Sbjct: 662 VFD 664



 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 132/276 (47%), Gaps = 2/276 (0%)

Query: 102 MDEASRLLDLMV-QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           +D+A +  D    Q   + + FT + L+  F    K   A +LF +     C  D ++Y+
Sbjct: 112 LDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYS 171

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            LING+CK ++ ++A  L  EM  +GI P    YNT+  GL +  +V+ AL  + +MQR 
Sbjct: 172 TLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR- 230

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
           + A    TY   +D LCK+  I +A  +   +    C  ++  YN LI+G CK G ++ A
Sbjct: 231 NCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEA 290

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           + LF  +       DV TYNI+I G C   +      L  +M +    PN I + TL+  
Sbjct: 291 VVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDS 350

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            V+  K      L   M  +   P     ++++D+ 
Sbjct: 351 LVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMF 386


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  247 bits (630), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 133/345 (38%), Positives = 201/345 (58%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V YN IID LCK   V +A  L+ +M  + I P+VVTY +LI+G C      EA  
Sbjct: 206 KPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVA 265

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  + + P V TF++++D L K GKM  A  +L +M++  V+P+  TY++L+DG+ 
Sbjct: 266 LLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYF 325

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L  ++  A+ +F SM   G      SY I+I+G CK K V+EA+SL+ EM  K + P  +
Sbjct: 326 LVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTI 385

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N+L  GL +  ++ +   L ++M+     AD  TY++ ID LCKN ++ +A+ LF+ +
Sbjct: 386 TFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKM 445

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + + D+  Y  LIDGLCK GRL+IA E+F+ L  +    D+ TY +MI G C  G  
Sbjct: 446 ITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLF 505

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           D+A  L   ME+N   PN I F  +I      ++  K  +LL +M
Sbjct: 506 DEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREM 550



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 192/357 (53%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           ++Y T+I+GLCK G    A  L   ++  +I PDVV YN +I  LC      EA  L+ E
Sbjct: 175 ISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSE 234

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M  + + P+VVT+  ++   C  G + EA  LL+ M  +++ P+ +T+S L+D     GK
Sbjct: 235 MNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGK 294

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +  A+ +   M     K D V+YN L++GY    EV+ A  ++  M   G+ P V +Y  
Sbjct: 295 MKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTI 354

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  GL +   V+ A+ LFEEM+  +V  +T T+N+ IDGLCK+G I    +L   +    
Sbjct: 355 MIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRS 414

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              D+  Y+ LID LCK+  L+ A+ LF+ +  + +  D+ TY I+I GLC  G++  A 
Sbjct: 415 QLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQ 474

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           ++F  +       ++  +  +I GF +     + + LL KM++   +P+A    +++
Sbjct: 475 EVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIII 531



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 185/363 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P T  +N I+  L K      A +L   +  + I  D+VT N LI+  CH      +  +
Sbjct: 67  PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              ++ +G  P V+T   ++  LC  G++ +A +  D +V  + + +  +Y TL++G C 
Sbjct: 127 LATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCK 186

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A +L  ++E    K D V YNI+I+  CKNK V EA +LY EM +K I P VVT
Sbjct: 187 IGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVT 246

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G   +  +  A+ L  EM+  ++  D  T++  ID L K G +  A  +   + 
Sbjct: 247 YTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMM 306

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+  YN L+DG      ++ A  +F S+ +  +   V +Y IMI GLC    +D
Sbjct: 307 KAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVD 366

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  LF +M+   V PN I F +LI G  +  + + V +L+ KM+++  + D    S ++
Sbjct: 367 EAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLI 426

Query: 374 DLL 376
           D L
Sbjct: 427 DAL 429



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 154/323 (47%), Gaps = 3/323 (0%)

Query: 55  NSLIHGLCHAN---DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL 111
           ++++H   H N   D N+A  LF  M+     P    FN I+  L K  +   A  L   
Sbjct: 35  SAMLHSQSHYNNHNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKH 94

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           +  + +  +  T + L++ FC  G+I  +  +  ++   G   D ++   LI G C   E
Sbjct: 95  LDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGE 154

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           V++AL  + ++V+   +   ++Y TL  GL +I + + A++L   ++   +  D   YN 
Sbjct: 155 VKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNI 214

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            ID LCKN  + EA  L+  +   +   ++  Y  LI G C  G L  A+ L   +  + 
Sbjct: 215 IIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKN 274

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           +  DV T++I+I  L  +G+M  A  +   M +  V P+V+ + +L+ G+  +N+     
Sbjct: 275 INPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAK 334

Query: 352 ELLHKMKEKKVMPDASIVSMVVD 374
            + + M +  V P     ++++D
Sbjct: 335 YVFNSMAQSGVTPGVQSYTIMID 357



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 123/239 (51%)

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           N A  LF  M  M        +N +++   K +    A+SL + +  KGI   +VT N L
Sbjct: 51  NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
                 + Q+  +  +   + +     D  T  T I GLC  G + +A++    +  L+ 
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEF 170

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           +LD  +Y  LI+GLCK G  + A++L R+L  R +  DVV YNI+I  LC +  + +A +
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACN 230

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           L+ +M    + PNV+ + TLI+GF  +    + + LL++MK K + PD    S+++D L
Sbjct: 231 LYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDAL 289



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 60/103 (58%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TY  +IDGLCK G +  A+ +F  +  +  + D+ TY  +I G C A  ++EA  
Sbjct: 451 QPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALA 510

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           L  +M D G  P+ +TF++I+  L +  + D+A +LL  M+ R
Sbjct: 511 LLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIAR 553


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  247 bits (630), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 133/357 (37%), Positives = 204/357 (57%), Gaps = 5/357 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +TY+T+IDGLCK+  +  A  LF  +    I  DVV YNSLIHG C    W EA R
Sbjct: 192 RPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATR 251

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+   + P   TFN+++D LCK G++ EA  +  +M++R  +P+  TY+ LM+GFC
Sbjct: 252 LLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFC 311

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L+  ++ A ELF  M   G + D ++YN+LINGYCK   V+EA+ L++E+  K + P + 
Sbjct: 312 LSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLA 371

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  GL ++ ++    +L +EM     + D  TYN F+D  CK+    +A+ LFR +
Sbjct: 372 TYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQI 431

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             GI     D   Y+ +++  CK  +L+IA E  + L       +V TY IMI+ LC D 
Sbjct: 432 VQGIWP---DFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDC 488

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             D+A  L   M++N   P+ + F T+I      N+  K  +L  +M E+ ++ D +
Sbjct: 489 SFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVNDEA 545



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 185/364 (50%), Gaps = 1/364 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VT+NT+I+G C  G V KA A  L +  +    D  +Y SLI+GLC      +A +
Sbjct: 122 QPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQ 181

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M +  V+P+++T++ ++D LCK+  + +A RL  L+  R +  +   Y++L+ G C
Sbjct: 182 LLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCC 241

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+   A  L   M       DD ++NIL++  CK   + EA  ++  M+ +G KP +V
Sbjct: 242 SVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIV 301

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L  G    + V  A +LF  M +  +  D   YN  I+G CK   + EA+ LF+ +
Sbjct: 302 TYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEI 361

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++  YN LIDGLCK GR+    EL   +  R    D+VTYNI +   C     
Sbjct: 362 RCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPY 421

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +KA  LF  + +  + P+  ++  ++  F +  K     E L  +      P+    +++
Sbjct: 422 EKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIM 480

Query: 373 VDLL 376
           ++ L
Sbjct: 481 INAL 484



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 193/362 (53%), Gaps = 2/362 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    ++ ++  + + G    A +LF Q+  + I P + T   LI+  CH    + A  L
Sbjct: 53  PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSL 112

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL-LDLMVQRDVRPNAFTYSTLMDGFC 132
              ++  G QP++VTFN +++  C NG + +A    LDLM  +    + F+Y +L++G C
Sbjct: 113 LGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMA-KGYPLDEFSYGSLINGLC 171

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+   A +L   ME    + + ++Y+ +I+G CK++ + +AL L+  + S+GI   VV
Sbjct: 172 KNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVV 231

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN+L  G   + Q   A +L   M R ++  D  T+N  +D LCK G IVEA  +F  +
Sbjct: 232 AYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVM 291

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + DI  YN L++G C S  +  A ELF  + +R L  DV+ YN++I+G C    +
Sbjct: 292 MKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMV 351

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A  LF ++    + PN+  + +LI G  ++ + S V EL+ +M ++   PD    ++ 
Sbjct: 352 DEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIF 411

Query: 373 VD 374
           +D
Sbjct: 412 LD 413



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 179/343 (52%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           VD     F +M  ++  P +  ++ L+  +     +  A  LF ++  +G+ PS+ T  +
Sbjct: 36  VDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTI 95

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C    +  A  LL  +++   +PN  T++TL++GFC+ G +++A      + + G
Sbjct: 96  LINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKG 155

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
              D+ SY  LING CKN +  +AL L ++M    ++P ++TY+T+  GL +   +  AL
Sbjct: 156 YPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADAL 215

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           +LF  +    +  D   YN+ I G C  G   EA  L   +       D   +N L+D L
Sbjct: 216 RLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDAL 275

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           CK GR+  A  +F  + +R    D+VTYN ++ G C    + +A +LF  M +  + P+V
Sbjct: 276 CKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDV 335

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + +  LI+G+ +I+   + + L  +++ K ++P+ +  + ++D
Sbjct: 336 LNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLID 378



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 182/361 (50%), Gaps = 1/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T   +I+  C +  +  A +L   +      P++VT+N+LI+G C     ++A   
Sbjct: 88  PSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAF 147

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++M +G      ++  +++ LCKNG+  +A +LL  M +  VRPN  TYST++DG C 
Sbjct: 148 RLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCK 207

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              I  A  LF  + S G   D V+YN LI+G C   +  EA  L   MV   I P   T
Sbjct: 208 DRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYT 267

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L   L +  ++  A  +F  M +     D  TYN  ++G C +  + EA ELF  + 
Sbjct: 268 FNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMV 327

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E D+  YN LI+G CK   ++ A+ LF+ +  + LV ++ TYN +I GLC  G+M 
Sbjct: 328 KRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMS 387

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
              +L  +M +   +P+++ +   +  F +     K I L  ++ +  + PD  +  ++V
Sbjct: 388 CVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIV 446

Query: 374 D 374
           +
Sbjct: 447 E 447



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 3/198 (1%)

Query: 180 REMVSKGIKPTVVTYNTLFLGLF---EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           R ++ + I     + +  F G     + H V+  L  F  M R         ++  +  +
Sbjct: 6   RYVLPRSIHILFFSQHVRFFGHLHPPKFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAI 65

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
            + G+   A+ LF  L        I     LI+  C    L  A  L  ++ +     ++
Sbjct: 66  VRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNM 125

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           VT+N +I+G C +G + KA    LD+       +   + +LI+G  +  +    ++LL K
Sbjct: 126 VTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQK 185

Query: 357 MKEKKVMPDASIVSMVVD 374
           M+E  V P+    S V+D
Sbjct: 186 MEEDLVRPNLITYSTVID 203



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 43/71 (60%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TY  +I+ LCK+   D+A  L  +M   +  PD VT+ ++I  L   N+ ++A+
Sbjct: 470 CCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAE 529

Query: 72  RLFFEMMDQGV 82
           +L  EM+++G+
Sbjct: 530 KLRLEMIERGL 540


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  247 bits (630), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 126/352 (35%), Positives = 196/352 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P++ +Y  +IDGL K G ++ A+ LF ++    + P  V Y SLIHGLC AN +++A+ L
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M  +G  PS VT+NVI+D  CK G ++EA  L+  M++    P+  TY+T+MDG C 
Sbjct: 68  FADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G++  A  LF  ME +GC  +  S+N +I G C+  ++++A  ++ EM ++ I P   +
Sbjct: 128 SGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWS 187

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +  ++  A KLF  M    +     TYN  I G+C    + EA+ELF+++ 
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C      +N LID  CK G+++ A  L + +     V DVVTY+ +I GLC+  ++D
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            A  L  DM +    P V+   TLIHG  +  +  +  E+L  M      PD
Sbjct: 308 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPD 359



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 126/352 (35%), Positives = 199/352 (56%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT++DGLCK G V++A  LF +M+     P+  ++N++I GLC  +  ++A ++
Sbjct: 113 PDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQV 172

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM  + + P   ++ +++D L K GK++EA +L   M+   + P+A TY+ ++ G CL
Sbjct: 173 FHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCL 232

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              ++ A ELF SM S GC+    ++NILI+ +CK  +++EA  L + M   G  P VVT
Sbjct: 233 AYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVT 292

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+TL  GL  I +V+ A  L E+M +        T NT I GLCK G I EA E+   + 
Sbjct: 293 YSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMV 352

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+  YN L+ G C++G+ E A EL   +  R L  +VVTY  ++ GLC   ++ 
Sbjct: 353 SSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLP 412

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A  +F  M+ +  APN+  +  LI GF    +    ++L  +M    + PD
Sbjct: 413 EACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD 464



 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 125/354 (35%), Positives = 196/354 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYN IID  CK G +++A  L  +M  +   PDVVTYN+++ GLC +    EA 
Sbjct: 76  CPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEAL 135

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM   G  P+  + N I+  LC+  K+D+A ++   M  RD+ P++++Y  L+DG 
Sbjct: 136 LLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGL 195

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GK+N A +LF  M   G     V+YN++I+G C    ++EAL L++ M SKG +P+ 
Sbjct: 196 AKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSR 255

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+N L     +  +++ A +L + M  D    D  TY+T I GLC    + +A  L   
Sbjct: 256 FTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 315

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +C+  +   N LI GLCK+GR++ A E+  ++       DVVTYN ++HG C  GQ
Sbjct: 316 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 375

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            ++A +L  DM    +APNV+ +  L+ G  + N+  +   +  +MK     P+
Sbjct: 376 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429



 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 119/348 (34%), Positives = 189/348 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  ++NTII GLC++  +D+A  +F +M+  +I PD  +Y  LI GL  A   NEA 
Sbjct: 146 CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAY 205

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +LF  M+D G+ PS VT+NV++  +C    +DEA  L   M  +  RP+ FT++ L+D  
Sbjct: 206 KLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAH 265

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK++ A  L   M   G   D V+Y+ LI+G C    V++A  L  +MV +  KPTV
Sbjct: 266 CKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 325

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT NTL  GL +  +++ A ++ + M     + D  TYNT + G C+ G    A EL   
Sbjct: 326 VTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSD 385

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       ++  Y  L+ GLCK+ RL  A  +F  +       ++ TY  +I G C+ GQ
Sbjct: 386 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ 445

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           +D    LF +M    ++P+ +++ TL     +  + ++ +E+L + +E
Sbjct: 446 VDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE 493



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 115/312 (36%), Positives = 165/312 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P++ +Y  +IDGL K G +++A  LF +M    I P  VTYN +IHG+C A   +EA  L
Sbjct: 183 PDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALEL 242

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M  +G +PS  TFN+++D  CK GKMDEA RLL  M      P+  TYSTL+ G C 
Sbjct: 243 FKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS 302

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +++ A  L   M    CK   V+ N LI+G CK   ++EA  +   MVS G  P VVT
Sbjct: 303 IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 362

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G     Q E A +L  +M    +A +  TY   + GLCK   + EA  +F  + 
Sbjct: 363 YNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMK 422

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  ++  Y  LI G C +G+++  L+LF  +    +  D V Y  +   LC  G+  
Sbjct: 423 SSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSA 482

Query: 314 KAHDLFLDMEEN 325
           +A ++  +  E+
Sbjct: 483 RALEILREGRES 494



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/323 (34%), Positives = 171/323 (52%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           M   N++PD  +Y  LI GL  A   N+A+ LF +++  GV PS V +  ++  LC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
            D+A  L   M +R   P+  TY+ ++D  C  G +  A +L   M   G   D V+YN 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           +++G CK+  VEEAL L+ EM   G  P   ++NT+ LGL +  +++ A ++F EM+  D
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           +  D+ +Y   IDGL K G + EA +LFR +           YN +I G+C +  L+ AL
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           ELF+S+  +       T+NI+I   C  G+MD+A  L   M ++   P+V+ + TLI G 
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 342 VRINKPSKVIELLHKMKEKKVMP 364
             I +      LL  M +++  P
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKP 323



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 159/300 (53%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M ++ V P   ++ +++D L K GK+++A  L   ++   V P+   Y++L+ G C+   
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
            + A ELF  M   GC    V+YN++I+  CK   +EEA  L ++M+  G  P VVTYNT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  GL +  +VE AL LF EM+R     +  ++NT I GLC+   I +A ++F  +    
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              D  +Y  LIDGL K+G+L  A +LFR +    +    VTYN++IHG+C    +D+A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +LF  M      P+   F  LI    +  K  +   LL +M +   +PD    S ++  L
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 126/285 (44%), Gaps = 42/285 (14%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP  VT NT+I GLCK G + +A+ +   M     +PDVVTYN+L+HG C A     A+
Sbjct: 321 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAR 380

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +M+ +G+ P+VVT+  ++  LCK  ++ EA  +   M      PN FTY+ L+ GF
Sbjct: 381 ELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGF 440

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK--------------------- 170
           C  G+++   +LFG M   G   D V Y  L    CK+                      
Sbjct: 441 CSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAW 500

Query: 171 ----------------EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
                           ++E AL   R+MV  G  P      +L  GL +  Q   A  + 
Sbjct: 501 GDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVL 560

Query: 215 EEMQRDDVAADTSTYN---TFIDGLCKNGYIVEAVELFRTLGILK 256
           EE+   D+A           F++ +   GY +E   L   L  LK
Sbjct: 561 EEIM--DLAYGGKARGKAAKFVEEMVGKGYEIEDGVLKPLLSTLK 603


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  247 bits (630), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 121/327 (37%), Positives = 193/327 (59%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G+  KPN VTY T+I  LCK   ++ A  LF QM      P+VVTYN+L+ GLC    W
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            +A  L  +MM + ++P+V+TF  ++D   K GK+ EA  L ++M+Q  V P+ FTY +L
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++G C+ G ++ A ++F  ME  GC  ++V Y  LI+G+CK+K VE+ + ++ EM  KG+
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
               +TY  L  G   + + + A ++F +M       D  TYN  +DGLC NG + +A+ 
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALM 419

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +F  +   + +++I  Y  +I G+CK G++E A +LF SL  + +  +V+TY  MI G C
Sbjct: 420 IFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC 479

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIF 334
             G + +A  LF  M+E+   PN  ++
Sbjct: 480 RRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 130/356 (36%), Positives = 199/356 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT+ ++++G C    ++ A ALF Q+ G    P+VVTY +LI  LC     N A  
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF +M   G +P+VVT+N ++  LC+ G+  +A+ LL  M++R + PN  T++ L+D F 
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A+EL+  M  M    D  +Y  LING C    ++EA  ++  M   G  P  V
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y TL  G  +  +VE  +K+F EM +  V A+T TY   I G C  G    A E+F  +
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   DI+ YN L+DGLC +G++E AL +F  + +R +  ++VTY I+I G+C  G++
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           + A DLF  +    + PNVI + T+I GF R     +   L  KMKE   +P+ S+
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 181/358 (50%), Gaps = 2/358 (0%)

Query: 18  TYNTII-DGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           +Y  I+ +GL    F D A  LF +M      P ++ +  L+  +   N ++    LF +
Sbjct: 50  SYRKILRNGLHNLQFND-ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQ 108

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M   G+ P + T N++M  +C + +   AS  L  M++    P+  T+++L++G+C   +
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           I  A  LF  +  MG K + V+Y  LI   CKN+ +  A+ L+ +M + G +P VVTYN 
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  GL EI +   A  L  +M +  +  +  T+   ID   K G ++EA EL+  +  + 
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              D+  Y  LI+GLC  G L+ A ++F  + R     + V Y  +IHG C   +++   
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +F +M +  V  N I +  LI G+  + +P    E+ ++M  ++  PD    ++++D
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 187/360 (51%), Gaps = 2/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + +  ++  + K    D   +LF QM+   I P + T N ++H +C ++    A   
Sbjct: 81  PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +MM  G +P +VTF  +++  C   ++++A  L D ++    +PN  TY+TL+   C 
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +N A ELF  M + G + + V+YN L+ G C+     +A  L R+M+ + I+P V+T
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L     ++ ++  A +L+  M +  V  D  TY + I+GLC  G + EA ++F  + 
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  +   Y  LI G CKS R+E  +++F  + ++ +VA+ +TY ++I G C  G+ D
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A ++F  M      P++  +  L+ G     K  K + +   M+++++  D +IV+  +
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM--DINIVTYTI 438


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 134/364 (36%), Positives = 208/364 (57%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY T+I  LC+ G +D A   F QM  + + PD   YN LI G C      +AK 
Sbjct: 439 KPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKE 498

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  E+M+ G+   +V F+ I++ LCK G++ +A  + DL V   + P+A  YS LMDG+C
Sbjct: 499 LISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYC 558

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK+ +A  +F +M S G + + V Y  L+NGYCK   ++E LSL+REM+ +GIKP+ +
Sbjct: 559 LVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTI 618

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ +  GLF+  +   A   F EM    +A D  TYN  + GL KN    EA+ LF+ L
Sbjct: 619 LYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKEL 678

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  +++I   N +IDG+ ++ R+E A +LF S+ R  LV +VVTY+IMI  L  +G +
Sbjct: 679 RAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLV 738

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A D+F  M+     PN  +   ++   ++ N+  +    L K+ E+    +     ++
Sbjct: 739 EEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLL 798

Query: 373 VDLL 376
           VDL 
Sbjct: 799 VDLF 802



 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/406 (32%), Positives = 210/406 (51%), Gaps = 35/406 (8%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
            E G VC PN V YNT+IDG  KEG V+KA  LF +M    I PD+VTYNS++H LC A 
Sbjct: 222 AEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKAR 281

Query: 66  -----------------------------------DWNEAKRLFFEMMDQGVQPSVVTFN 90
                                               W EA R+F EM    + P VVT +
Sbjct: 282 AMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLS 341

Query: 91  VIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
           ++M  LCK GK+ EA  + D M  +   P+ F+Y+ +++G+   G +    +LF  M   
Sbjct: 342 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD 401

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G   D  ++N+LI  Y     +++A+ ++ EM   G+KP VVTY T+   L  I +++ A
Sbjct: 402 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 461

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           ++ F +M    VA D   YN  I G C +G +++A EL   +      LDI  ++ +I+ 
Sbjct: 462 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 521

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LCK GR+  A  +F       L  D V Y++++ G C  G+M+KA  +F  M    + PN
Sbjct: 522 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 581

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           V+++ TL++G+ +I +  + + L  +M ++ + P   + S+++D L
Sbjct: 582 VVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 627



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 186/402 (46%), Gaps = 38/402 (9%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           V  P + TY  ++D   +    + A A F Q+    +  +++  N L+ G C A   +EA
Sbjct: 119 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEA 178

Query: 71  KRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV--RPNAFTYSTL 127
             +      + G  P V ++++++  LC  GK  +A  LL +M +      PN   Y+T+
Sbjct: 179 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTV 238

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DGF   G +N+A +LF  M   G   D V+YN +++  CK + +++A +  R+MV+K +
Sbjct: 239 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRV 298

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P   TYN L  G     Q + A+++F+EM+R  +  D  T +  +  LCK G I EA +
Sbjct: 299 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 358

Query: 248 LFRTLGILKCELDIQAYN----------CLID-------------------------GLC 272
           +F T+ +     D+ +YN          CL+D                            
Sbjct: 359 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYA 418

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
             G L+ A+ +F  +    +  DVVTY  +I  LC  G+MD A + F  M +  VAP+  
Sbjct: 419 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 478

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +  LI GF       K  EL+ ++    +  D    S +++
Sbjct: 479 AYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 520



 Score =  148 bits (374), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 167/336 (49%), Gaps = 9/336 (2%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           ++P   TY  L+     A+    A   F +++  G++ +++  N +++  C+  + DEA 
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEA- 178

Query: 107 RLLDLMVQRDVR----PNAFTYSTLMDGFCLTGKINRAEELFGSMESMG--CKHDDVSYN 160
             LD+++ R       P+ F+YS L+   C  GK  +A++L   M   G  C  + V+YN
Sbjct: 179 --LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 236

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            +I+G+ K  +V +A  L++EMV +GI P +VTYN++   L +   ++ A     +M   
Sbjct: 237 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 296

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            V  +  TYN  I G    G   EAV +F+ +       D+   + L+  LCK G+++ A
Sbjct: 297 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 356

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            ++F ++  +    DV +YNIM++G    G +    DLF  M  + +AP+   F  LI  
Sbjct: 357 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKA 416

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +       K + + ++M++  V PD      V+  L
Sbjct: 417 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 452



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 127/266 (47%), Gaps = 35/266 (13%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V   P+ V Y+ ++DG C  G ++KA  +F  M    I P+VV Y +L++G C     
Sbjct: 539 VNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRI 598

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +E   LF EM+ +G++PS + +++I                                   
Sbjct: 599 DEGLSLFREMLQRGIKPSTILYSII----------------------------------- 623

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DG    G+   A+  F  M   G   D  +YNI++ G  KN+  +EA+ L++E+ +  +
Sbjct: 624 IDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNV 683

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           K  ++T NT+  G+F+  +VE A  LF  + R  +  +  TY+  I  L K G + EA +
Sbjct: 684 KINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAED 743

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCK 273
           +F ++    CE + +  N ++  L K
Sbjct: 744 MFSSMQNAGCEPNSRLLNHVVRELLK 769



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 114/237 (48%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V Y T+++G CK G +D+  +LF +M    I P  + Y+ +I GL  A     AK 
Sbjct: 579 EPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKM 638

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM + G+   + T+N+++  L KN   DEA  L   +   +V+ N  T +T++DG  
Sbjct: 639 KFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMF 698

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            T ++  A++LF S+       + V+Y+I+I    K   VEEA  ++  M + G +P   
Sbjct: 699 QTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSR 758

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             N +   L + +++  A     ++   + + +  T    +D     G   E +   
Sbjct: 759 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 815



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 124/289 (42%), Gaps = 38/289 (13%)

Query: 115 RDVRPNAFTYSTLMD-----------------------------------GFCLTGKINR 139
           R + P + TY+ LMD                                   GFC   + + 
Sbjct: 118 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 177

Query: 140 AEE-LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI--KPTVVTYNT 196
           A + L      +GC  D  SY+IL+   C   +  +A  L R M   G    P VV YNT
Sbjct: 178 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 237

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  G F+   V  A  LF+EM +  +  D  TYN+ +  LCK   + +A    R +   +
Sbjct: 238 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 297

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              +   YN LI G   +G+ + A+ +F+ + R  ++ DVVT ++++  LC  G++ +A 
Sbjct: 298 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 357

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           D+F  M      P+V  +  +++G+        + +L   M    + PD
Sbjct: 358 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 406


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 132/367 (35%), Positives = 208/367 (56%), Gaps = 1/367 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC+P  VTYNT++ GL K G V  A  L   M    ++PDV+T+NS++ GLC      +A
Sbjct: 468 VCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDA 527

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             +F   +++G +P+VVT++ ++D L K  KMDEA +LL  MV+   R N  TYST++DG
Sbjct: 528 HNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDG 587

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               G++  A  +   M   GC  D V+YN LI+G+ K + + EA+ L REM+  G  P+
Sbjct: 588 LLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPS 647

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY TL  GL    + + A+++ + M     A +  TY++ +DGLCK G + EA+  F 
Sbjct: 648 VVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFE 707

Query: 251 TLGILK-CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
            +   +     + AY+ LIDGLCK+GR++ A E    + R   + DVVT++I+I+GLC+ 
Sbjct: 708 KMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDA 767

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++D   +LF  M E     ++  +  +I+ +    + S    LL +MK   +  +    
Sbjct: 768 GRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTH 827

Query: 370 SMVVDLL 376
            +V+  L
Sbjct: 828 GIVIKAL 834



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 205/388 (52%), Gaps = 23/388 (5%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKG-ENINPDVVTYNSLIHGLCHANDWNEA 70
           C PN VT++T+I GLC  G V++A  ++ +M   E I+P+  TY  L+ GLC A D    
Sbjct: 377 CSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRL 436

Query: 71  KRLFFEMMD---------------------QGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
           ++ F +M++                     Q  +P++VT+N ++  L K+G + +A  LL
Sbjct: 437 EQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLL 496

Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
           + M++  + P+  T+++++DG C   +I  A  +F      GC+ + V+Y+ LI+G  K 
Sbjct: 497 EFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKM 556

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
            +++EAL L  +MV  G +   VTY+T+  GL ++ ++E A+ +  +M+      D  TY
Sbjct: 557 AKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTY 616

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           NT IDG  K   + EAV L R +        +  Y  L  GLC+SGR + A+E+   +  
Sbjct: 617 NTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAA 676

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM-EENAVAPNVIIFVTLIHGFVRINKPS 348
           R    + +TY+ ++ GLC  G++ +A   F  M  +  VAP+VI +  LI G  +  +  
Sbjct: 677 RGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRID 736

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +  E L +M     +PD    S++++ L
Sbjct: 737 EAYEFLERMIRAGRIPDVVTFSILINGL 764



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 187/364 (51%), Gaps = 6/364 (1%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P+ VTY T+  GLC+ G  D+A  +   M      P+ +TY+S++ GLC A    EA   
Sbjct: 646  PSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGY 705

Query: 74   FFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F +M  D+ V P V+ ++ ++D LCK G++DEA   L+ M++    P+  T+S L++G C
Sbjct: 706  FEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLC 765

Query: 133  LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              G+I+   ELF  M   GCK D  +YN +IN YC   E   A +L  EM + GI    V
Sbjct: 766  DAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTV 825

Query: 193  TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            T+  +   L    +++ A+  F  +  D    D  +YNT I  L  +    +A+EL R +
Sbjct: 826  THGIVIKALCGNDRIDEAVSYFHSIPED--CRDEISYNTLITSLVASRRSEQALELLRAM 883

Query: 253  GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   D   Y  ++DGL K+G  E+A +L + +  R    D+ TY IMI GL    Q+
Sbjct: 884  VADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQL 943

Query: 313  DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
              A D F +M    + P+ I++ +LI  F + +K     +LL   +   + P  ++ S +
Sbjct: 944  PLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLL---RSSGIEPTITMYSTM 1000

Query: 373  VDLL 376
            VD L
Sbjct: 1001 VDSL 1004



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 192/349 (55%), Gaps = 9/349 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VTY+T+IDGLC++  VDK   L  +M G    P+ VTYN+L++ L       EA  
Sbjct: 33  RPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFS 92

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M   G  P ++TF +I+  LCK G+++ A R++D MV R   P+   ++ L+   C
Sbjct: 93  LLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALC 152

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ A   F  +  +G   D V+YN +++G  K   +E A  + + +      PTV 
Sbjct: 153 ELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVF 212

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+     GL +   +  A + F+ M +  V+ +T TY+  IDGLCK G +  A+ L R  
Sbjct: 213 TFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD- 271

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +  + A++ L+ GLC++ RLE A++L +++P    V +VV +N +++GLC   ++
Sbjct: 272 --KNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQARRV 326

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFV---RINKPSKVIELLHKMK 358
           D+A +LF  M+E+  + +VI +  L+ G     RI +  + +EL+ + +
Sbjct: 327 DEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTE 375



 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 193/372 (51%), Gaps = 16/372 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  +T+  II GLCKEG ++ A  +  +M      PDV  +  L+H LC     +EA 
Sbjct: 102 CPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAW 161

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             F +++  G  P  VT+N ++D L K G+++ A  +L L+ +    P  FT++  +DG 
Sbjct: 162 FFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGL 221

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G +  A E F SM   G   + V+Y+ LI+G CK  +++ AL L R+   K  +  +
Sbjct: 222 SKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD---KNSQAGM 278

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             +++L  GL + H++E A++L + M       +   +N+ ++GLC+   + EA ELF  
Sbjct: 279 FAFSSLLHGLCQAHRLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFELFDV 335

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFR--SLPRRV--LVADVVTYNIMIHGLC 307
           +    C  D+  YN L+ GLCK  R+    E +R   L RR      +VVT++ +I GLC
Sbjct: 336 MKESGCSADVITYNILLKGLCKLRRIP---EAYRHVELMRRTEGCSPNVVTFSTLIQGLC 392

Query: 308 NDGQMDKAHDLFLDM-EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           N G++++A +++  M     ++PN   +  L+ G  +     ++ +   +M E++    +
Sbjct: 393 NAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSS 452

Query: 367 S--IVSMVVDLL 376
           S  I S  VD L
Sbjct: 453 SWPIHSPEVDFL 464



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 178/349 (51%), Gaps = 6/349 (1%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTYN +I+GLCK G V  A   F +       P VVTY+++I GLC  N+ ++  +L  E
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M  +G  P+ VT+N +++ L   G+  EA  LL+ M      P   T+  ++ G C  G+
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           I  A  +   M   G   D   + +L++  C+   V+EA   +++++  G  P  VTYNT
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  GL++  ++E A  + + +     +    T+   +DGL K G +  A E F ++    
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              +   Y+ LIDGLCK+G+L+IAL L R    +   A +  ++ ++HGLC   ++++A 
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQ---AGMFAFSSLLHGLCQAHRLEEAI 298

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            L   M      PNV+ F +L++G  +  +  +  EL   MKE     D
Sbjct: 299 QLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSAD 344



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 164/307 (53%), Gaps = 3/307 (0%)

Query: 51  VVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD 110
           +VTYN LI+GLC A    +A   F + +  G +P+VVT++ ++D LC++ ++D+  +LL+
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
            M  R   PNA TY+TL++     G+   A  L   M + GC  + +++ ++I G CK  
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
           E+E A  +  EMV +G  P V  +  L   L E+ +V+ A   F+++       D  TYN
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           T +DGL K G +  A  + + L        +  +   +DGL K+G L  A E F S+P+ 
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
            +  + VTY+ +I GLC  G++D A  L  D    A    +  F +L+HG  + ++  + 
Sbjct: 241 GVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQA---GMFAFSSLLHGLCQAHRLEEA 297

Query: 351 IELLHKM 357
           I+LL  M
Sbjct: 298 IQLLKAM 304



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 173/348 (49%), Gaps = 5/348 (1%)

Query: 11   VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
            V  P+ + Y+ +IDGLCK G +D+A     +M      PDVVT++ LI+GLC A   +  
Sbjct: 714  VVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTG 773

Query: 71   KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
              LF  M ++G +  +  +N +++  C  G+   A  LL+ M    +  N  T+  ++  
Sbjct: 774  LELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKA 833

Query: 131  FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
             C   +I+ A   F S+    C+ D++SYN LI     ++  E+AL L R MV+ G  P 
Sbjct: 834  LCGNDRIDEAVSYFHSIPE-DCR-DEISYNTLITSLVASRRSEQALELLRAMVADGGSPD 891

Query: 191  VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
               Y T+  GLF+    E A KL +EM+    + D  TY   I GL K   +  A + F 
Sbjct: 892  ACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFE 951

Query: 251  TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             +     + D   Y+ LID  CK+ +++ A +L RS     +   +  Y+ M+  LC + 
Sbjct: 952  EMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRS---SGIEPTITMYSTMVDSLCKNR 1008

Query: 311  QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
              DKA ++  +M+     P + I+ +L   +V   +  + ++L++ ++
Sbjct: 1009 GTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 110/220 (50%)

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           V+YN+LING CK   V +A + +R+ +  G +PTVVTY+T+  GL   ++V+   KL EE
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M     A +  TYNT ++ L   G   EA  L   +    C  ++  +  +I GLCK G 
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +E A  +   +  R  V DV  + +++H LC  G++D+A   F  +      P+ + + T
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           ++ G  +  +      +L  + E    P     ++ VD L
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGL 221



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 44/81 (54%)

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           +VTYN++I+GLC  G++  A   F    +    P V+ + T+I G  R N+  K  +LL 
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 356 KMKEKKVMPDASIVSMVVDLL 376
           +M  +   P+A   + +V+ L
Sbjct: 61  EMAGRGCAPNAVTYNTLVNAL 81


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 134/364 (36%), Positives = 207/364 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY T+I  LC+ G +D A   F QM  + + PD   YN LI G C      +AK 
Sbjct: 426 KPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKE 485

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  E+M+ G+   +V F+ I++ LCK G++ +A  + DL V   + P+A  YS LMDG+C
Sbjct: 486 LISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYC 545

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK+ +A  +F +M S G + + V Y  L+NGYCK   ++E LSL+REM+ +GIKP+ +
Sbjct: 546 LVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTI 605

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ +  GLF+  +   A   F EM    +A D  TYN  + GL KN    EA+ LF+ L
Sbjct: 606 LYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKEL 665

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  +++I   N +IDG+ ++ R+E A +LF S+ R  LV  VVTY+IMI  L  +G +
Sbjct: 666 RAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLV 725

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A D+F  M+     PN  +   ++   ++ N+  +    L K+ E+    +     ++
Sbjct: 726 EEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLL 785

Query: 373 VDLL 376
           VDL 
Sbjct: 786 VDLF 789



 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/406 (32%), Positives = 210/406 (51%), Gaps = 35/406 (8%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
            E G VC PN V YNT+IDG  KEG V+KA  LF +M    I PD+VTYNS++H LC A 
Sbjct: 209 AEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKAR 268

Query: 66  -----------------------------------DWNEAKRLFFEMMDQGVQPSVVTFN 90
                                               W EA R+F EM    + P VVT +
Sbjct: 269 AMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLS 328

Query: 91  VIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
           ++M  LCK GK+ EA  + D M  +   P+ F+Y+ +++G+   G +    +LF  M   
Sbjct: 329 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD 388

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G   D  ++N+LI  Y     +++A+ ++ EM   G+KP VVTY T+   L  I +++ A
Sbjct: 389 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 448

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           ++ F +M    VA D   YN  I G C +G +++A EL   +      LDI  ++ +I+ 
Sbjct: 449 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 508

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LCK GR+  A  +F       L  D V Y++++ G C  G+M+KA  +F  M    + PN
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 568

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           V+++ TL++G+ +I +  + + L  +M ++ + P   + S+++D L
Sbjct: 569 VVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 614



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 186/402 (46%), Gaps = 38/402 (9%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           V  P + TY  ++D   +    + A A F Q+    +  +++  N L+ G C A   +EA
Sbjct: 106 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEA 165

Query: 71  KRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV--RPNAFTYSTL 127
             +      + G  P V ++++++  LC  GK  +A  LL +M +      PN   Y+T+
Sbjct: 166 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTV 225

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DGF   G +N+A +LF  M   G   D V+YN +++  CK + +++A +  R+MV+K +
Sbjct: 226 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRV 285

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P   TYN L  G     Q + A+++F+EM+R  +  D  T +  +  LCK G I EA +
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 345

Query: 248 LFRTLGILKCELDIQAYN----------CLID-------------------------GLC 272
           +F T+ +     D+ +YN          CL+D                            
Sbjct: 346 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYA 405

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
             G L+ A+ +F  +    +  DVVTY  +I  LC  G+MD A + F  M +  VAP+  
Sbjct: 406 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 465

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +  LI GF       K  EL+ ++    +  D    S +++
Sbjct: 466 AYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 507



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 167/336 (49%), Gaps = 9/336 (2%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           ++P   TY  L+     A+    A   F +++  G++ +++  N +++  C+  + DEA 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEA- 165

Query: 107 RLLDLMVQRDVR----PNAFTYSTLMDGFCLTGKINRAEELFGSMESMG--CKHDDVSYN 160
             LD+++ R       P+ F+YS L+   C  GK  +A++L   M   G  C  + V+YN
Sbjct: 166 --LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 223

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            +I+G+ K  +V +A  L++EMV +GI P +VTYN++   L +   ++ A     +M   
Sbjct: 224 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 283

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            V  +  TYN  I G    G   EAV +F+ +       D+   + L+  LCK G+++ A
Sbjct: 284 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 343

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            ++F ++  +    DV +YNIM++G    G +    DLF  M  + +AP+   F  LI  
Sbjct: 344 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKA 403

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +       K + + ++M++  V PD      V+  L
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 439



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 126/266 (47%), Gaps = 35/266 (13%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V   P+ V Y+ ++DG C  G ++KA  +F  M    I P+VV Y +L++G C     
Sbjct: 526 VNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRI 585

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +E   LF EM+ +G++PS + +++I                                   
Sbjct: 586 DEGLSLFREMLQRGIKPSTILYSII----------------------------------- 610

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DG    G+   A+  F  M   G   D  +YNI++ G  KN+  +EA+ L++E+ +  +
Sbjct: 611 IDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNV 670

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           K  ++T NT+  G+F+  +VE A  LF  + R  +     TY+  I  L K G + EA +
Sbjct: 671 KINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAED 730

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCK 273
           +F ++    CE + +  N ++  L K
Sbjct: 731 MFSSMQNAGCEPNSRLLNHVVRELLK 756



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 113/237 (47%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V Y T+++G CK G +D+  +LF +M    I P  + Y+ +I GL  A     AK 
Sbjct: 566 EPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKV 625

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM + G+   + T+N+++  L KN   DEA  L   +   +V+ N  T +T++DG  
Sbjct: 626 KFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMF 685

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            T ++  A++LF S+         V+Y+I+I    K   VEEA  ++  M + G +P   
Sbjct: 686 QTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSR 745

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             N +   L + +++  A     ++   + + +  T    +D     G   E +   
Sbjct: 746 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 124/289 (42%), Gaps = 38/289 (13%)

Query: 115 RDVRPNAFTYSTLMD-----------------------------------GFCLTGKINR 139
           R + P + TY+ LMD                                   GFC   + + 
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 164

Query: 140 AEE-LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI--KPTVVTYNT 196
           A + L      +GC  D  SY+IL+   C   +  +A  L R M   G    P VV YNT
Sbjct: 165 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 224

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  G F+   V  A  LF+EM +  +  D  TYN+ +  LCK   + +A    R +   +
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 284

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              +   YN LI G   +G+ + A+ +F+ + R  ++ DVVT ++++  LC  G++ +A 
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 344

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           D+F  M      P+V  +  +++G+        + +L   M    + PD
Sbjct: 345 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 393


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 126/302 (41%), Positives = 189/302 (62%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + + + V YNTIIDG+CK+  V+ A   + +M  + I P VVTYN+LI GLC      
Sbjct: 202 GKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLK 261

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  L  +M+ + + P+V TF++++D  CK GK+ EA  +  +M+++DV+PN  TY++LM
Sbjct: 262 DAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLM 321

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +G+CL  ++N+AE +F +M  +G   D  SY+I+I+G+CK K V+EA+ L+ EM  K I 
Sbjct: 322 NGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIF 381

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTYN+L  GL +  ++ +ALKL  EM       +  TYN+ +D LCKN ++ +A+EL
Sbjct: 382 PDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIEL 441

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              L     +  +  YN LI+GLCKSGRL+ A ++F  +       DV TYN MI G C 
Sbjct: 442 LTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCK 501

Query: 309 DG 310
            G
Sbjct: 502 KG 503



 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 121/329 (36%), Positives = 189/329 (57%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V+Y T+I+GLCK G    A  +  ++ G+ +  DVV YN++I G+C     N+A   +
Sbjct: 173 NQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFY 232

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ + + P+VVT+N ++  LC  G++ +A  LL  M+  ++ P  +T+S L+D FC  
Sbjct: 233 SEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKE 292

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK+  A+ +F  M     K + V+YN L+NGYC   EV +A S++  M   G+ P V +Y
Sbjct: 293 GKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSY 352

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + +  G  +I  V+ A+KLFEEM    +  D  TYN+ IDGLCK+G I  A++L   +  
Sbjct: 353 SIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHD 412

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                +I  YN L+D LCK+  ++ A+EL   L    +   V TYNI+I+GLC  G++  
Sbjct: 413 RGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKD 472

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           A  +F D+  N    +V  + T+I GF +
Sbjct: 473 AQKVFEDVLVNGYNIDVYTYNTMIKGFCK 501



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 186/343 (54%), Gaps = 3/343 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ +T  T+I GLC +G + KA     ++       + V+Y +LI+GLC       A  
Sbjct: 136 EPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALE 195

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   +  + V+  VV +N I+D +CK+  +++A      MV + + P   TY+TL+ G C
Sbjct: 196 MLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLC 255

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + G++  A  L   M          +++IL++ +CK  +V+EA +++  M+ K +KP +V
Sbjct: 256 IMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIV 315

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  G   +++V  A  +F  M +  VA D  +Y+  I G CK   + EA++LF  +
Sbjct: 316 TYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEM 375

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   D+  YN LIDGLCKSGR+  AL+L   +  R    +++TYN ++  LC +  +
Sbjct: 376 HCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHV 435

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFV---RINKPSKVIE 352
           DKA +L   ++++ + P+V  +  LI+G     R+    KV E
Sbjct: 436 DKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFE 478



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 189/396 (47%), Gaps = 35/396 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + +  I+  L K        +L  QM+   I  ++VT + LI+        + +  +
Sbjct: 67  PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  ++ +G +P  +T   ++  LC  G + +A    D ++    + N  +Y TL++G C 
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A E+   ++    + D V YN +I+G CK+K V +A   Y EMV+K I PTVVT
Sbjct: 187 VGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVT 246

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV------- 246
           YNTL  GL  + Q++ A+ L  +M  +++     T++  +D  CK G + EA        
Sbjct: 247 YNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMM 306

Query: 247 ----------------------------ELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                                        +F T+  +    D+ +Y+ +I G CK   ++
Sbjct: 307 KKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVD 366

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A++LF  +  + +  DVVTYN +I GLC  G++  A  L  +M +    PN+I + +L+
Sbjct: 367 EAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLL 426

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
               + +   K IELL K+K+  + P     +++++
Sbjct: 427 DALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILIN 462



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 143/230 (62%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   T++ ++D  CKEG V +AK +F+ M  +++ P++VTYNSL++G C  N+ N+A+ +
Sbjct: 277 PTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESI 336

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   GV P V ++++++   CK   +DEA +L + M  + + P+  TY++L+DG C 
Sbjct: 337 FNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCK 396

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G+I+ A +L G M   G   + ++YN L++  CKN  V++A+ L  ++    I+P+V T
Sbjct: 397 SGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCT 456

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
           YN L  GL +  +++ A K+FE++  +    D  TYNT I G CK G+++
Sbjct: 457 YNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFVI 506



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 173/330 (52%)

Query: 45  ENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDE 104
           +N  P ++ +  ++  L  AN ++    L  +M   G+  ++VT +++++   + G    
Sbjct: 63  KNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSL 122

Query: 105 ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
           +  +   ++++   P+A T +TL+ G CL G I++A      + ++G + + VSY  LIN
Sbjct: 123 SFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLIN 182

Query: 165 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAA 224
           G CK  + + AL + R +  K ++  VV YNT+  G+ +   V  A   + EM    +  
Sbjct: 183 GLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICP 242

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
              TYNT I GLC  G + +A+ L   + +      +  ++ L+D  CK G+++ A  +F
Sbjct: 243 TVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVF 302

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
             + ++ +  ++VTYN +++G C   +++KA  +F  M +  VAP+V  +  +I GF +I
Sbjct: 303 VVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKI 362

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
               + ++L  +M  K++ PD    + ++D
Sbjct: 363 KMVDEAMKLFEEMHCKQIFPDVVTYNSLID 392



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 133/299 (44%), Gaps = 35/299 (11%)

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
           L+ Q++  P+   +  ++         +    L   ME  G   + V+ +ILIN + +  
Sbjct: 59  LLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLG 118

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
               + S++  ++ KG +P  +T  TL  GL     +  AL   +++       +  +Y 
Sbjct: 119 HNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYR 178

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           T I+GLCK G    A+E+ R +      LD+  YN +IDG+CK   +  A + +  +  +
Sbjct: 179 TLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAK 238

Query: 291 VLVADVVTYNIMIHGL-----------------------------------CNDGQMDKA 315
            +   VVTYN +I GL                                   C +G++ +A
Sbjct: 239 RICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEA 298

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            ++F+ M +  V PN++ + +L++G+  +N+ +K   + + M +  V PD    S+++ 
Sbjct: 299 KNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMIS 357


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 126/352 (35%), Positives = 196/352 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P++ +Y  +IDGL K G ++ A+ LF ++    + P  V Y SLIHGLC AN +++A+ L
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M  +G  PS VT+NV++D  CK G ++EA  L+  M++    P+  TY+T+MDG C 
Sbjct: 68  FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           + ++  A  LF  ME +GC  +  S+N +I G C+  ++++A  ++ EM +K I P   +
Sbjct: 128 SSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWS 187

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +  ++  A KLF+ M    +     TYN  I G+C    + EA+ELF+++ 
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C      +N LID  CK G+L+ A  L + +     V DVVTY+ +I GLC+  ++D
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            A  L  DM +    P V+   TLIHG  +  +  +  E+L  M      PD
Sbjct: 308 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPD 359



 Score =  241 bits (614), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 125/352 (35%), Positives = 198/352 (56%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT++DGLCK   V++A  LF +M+     P+  ++N++I GLC  +  ++A ++
Sbjct: 113 PDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQV 172

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM  + + P   ++ +++D L K GK++EA +L   M+   + P+A TY+ ++ G CL
Sbjct: 173 FHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCL 232

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              ++ A ELF SM S GC+    ++NILI+ +CK  +++EA  L + M   G  P VVT
Sbjct: 233 AYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVT 292

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+TL  GL  I +V+ A  L E+M +        T NT I GLCK G I EA E+   + 
Sbjct: 293 YSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMV 352

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+  YN L+ G C++G+ E A EL   +  R L  +VVTY  ++ GLC   ++ 
Sbjct: 353 SSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLP 412

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A  +F  M+ +  APN+  +  LI GF    +    ++L  +M    + PD
Sbjct: 413 EACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD 464



 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 123/354 (34%), Positives = 197/354 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYN +ID  CK G +++A  L  +M  +   PDVVTYN+++ GLC ++   EA 
Sbjct: 76  CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEAL 135

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM   G  P+  + N I+  LC+  K+D+A ++   M  +D+ P++++Y  L+DG 
Sbjct: 136 LLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGL 195

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GK+N A +LF  M   G     V+YN++I+G C    ++EAL L++ M SKG +P+ 
Sbjct: 196 AKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSR 255

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+N L     +  +++ A +L + M  D    D  TY+T I GLC    + +A  L   
Sbjct: 256 FTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 315

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +C+  +   N LI GLCK+GR++ A E+  ++       DVVTYN ++HG C  GQ
Sbjct: 316 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 375

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            ++A +L  DM    +APNV+ +  L+ G  + N+  +   +  +MK     P+
Sbjct: 376 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 119/348 (34%), Positives = 190/348 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  ++NTII GLC++  +D+A  +F +M+ ++I PD  +Y  LI GL  A   NEA 
Sbjct: 146 CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAY 205

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +LF  M+D G+ PS VT+NV++  +C    +DEA  L   M  +  RP+ FT++ L+D  
Sbjct: 206 KLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAH 265

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK++ A  L   M   G   D V+Y+ LI+G C    V++A  L  +MV +  KPTV
Sbjct: 266 CKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 325

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT NTL  GL +  +++ A ++ + M     + D  TYNT + G C+ G    A EL   
Sbjct: 326 VTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSD 385

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       ++  Y  L+ GLCK+ RL  A  +F  +       ++ TY  +I G C+ GQ
Sbjct: 386 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ 445

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           +D    LF +M    ++P+ +++ TL     +  + ++ +E+L + +E
Sbjct: 446 VDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE 493



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/312 (36%), Positives = 165/312 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P++ +Y  +IDGL K G +++A  LF +M    I P  VTYN +IHG+C A   +EA  L
Sbjct: 183 PDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALEL 242

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M  +G +PS  TFN+++D  CK GK+DEA RLL  M      P+  TYSTL+ G C 
Sbjct: 243 FKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS 302

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +++ A  L   M    CK   V+ N LI+G CK   ++EA  +   MVS G  P VVT
Sbjct: 303 IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 362

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G     Q E A +L  +M    +A +  TY   + GLCK   + EA  +F  + 
Sbjct: 363 YNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMK 422

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  ++  Y  LI G C +G+++  L+LF  +    +  D V Y  +   LC  G+  
Sbjct: 423 SSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSA 482

Query: 314 KAHDLFLDMEEN 325
           +A ++  +  E+
Sbjct: 483 RALEILREGRES 494



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/323 (33%), Positives = 171/323 (52%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           M   N++PD  +Y  LI GL  A   N+A+ LF +++  GV PS V +  ++  LC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
            D+A  L   M +R   P+  TY+ ++D  C  G +  A +L   M   G   D V+YN 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           +++G CK+  VEEAL L+ EM   G  P   ++NT+ LGL +  +++ A ++F EM+  D
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           +  D+ +Y   IDGL K G + EA +LF+ +           YN +I G+C +  L+ AL
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           ELF+S+  +       T+NI+I   C  G++D+A  L   M ++   P+V+ + TLI G 
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 342 VRINKPSKVIELLHKMKEKKVMP 364
             I +      LL  M +++  P
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKP 323



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 159/300 (53%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M ++ V P   ++ +++D L K GK+++A  L   ++   V P+   Y++L+ G C+   
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
            + A ELF  M   GC    V+YN++I+  CK   +EEA  L ++M+  G  P VVTYNT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  GL +  +VE AL LF EM+R     +  ++NT I GLC+   I +A ++F  +    
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              D  +Y  LIDGL K+G+L  A +LF+ +    +    VTYN++IHG+C    +D+A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +LF  M      P+   F  LI    +  K  +   LL +M +   +PD    S ++  L
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 122/269 (45%), Gaps = 37/269 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY+T+I GLC    VD A+ L   M      P VVT N+LIHGLC A    EA+ +
Sbjct: 288 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 347

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+  G  P VVT+N ++   C+ G+ + A  LL  MV R + PN  TY+ L+ G C 
Sbjct: 348 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 407

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++  A  +F  M+S GC  +  +Y  LI G+C   +V+  L L+ EMV  GI P  V 
Sbjct: 408 ANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVV 467

Query: 194 YNTLFL-------------------------------------GLFEIHQVEHALKLFEE 216
           Y TL                                       GL E  ++E AL    +
Sbjct: 468 YGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRD 527

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           M R           + + GLCK+G   EA
Sbjct: 528 MVRGGQLPAPERCASLVAGLCKSGQGGEA 556



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 122/273 (44%), Gaps = 42/273 (15%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP  VT NT+I GLCK G + +A+ +   M     +PDVVTYN+L+HG C A     A+
Sbjct: 321 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAR 380

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +M+ +G+ P+VVT+  ++  LCK  ++ EA  +   M      PN FTY+ L+ GF
Sbjct: 381 ELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGF 440

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK--------------------- 170
           C  G+++   +LFG M   G   D V Y  L    CK+                      
Sbjct: 441 CSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAW 500

Query: 171 ----------------EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
                           ++E AL   R+MV  G  P      +L  GL +  Q   A  + 
Sbjct: 501 GDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVL 560

Query: 215 EEMQRDDVAADTSTYN---TFIDGLCKNGYIVE 244
           EE+   D+A           F++ +   GY +E
Sbjct: 561 EEIM--DLAYGGKARGKAAKFVEEMVGKGYEIE 591


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 134/363 (36%), Positives = 207/363 (57%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + +PN V YN IID +CK   V+ A  L+ QM  + I+PD  T NSLI+G C      
Sbjct: 203 GKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLK 262

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  L  +M+ + + P + TF++++D  CK GK+ EA  +L + +++D+  +  TY++LM
Sbjct: 263 EAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLM 322

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+CL  +IN+A+++F SM S G   +  SY  +ING CK K V+EA++L+ EM  + I 
Sbjct: 323 DGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKII 382

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTYN+L  GL ++ ++   LKL +EM       +  TYN+ +D LCKN ++ +A+ L
Sbjct: 383 PNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIAL 442

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              L       D+  Y  LI GLC+SG+LE A ++F  L  +    DV TY +MI G C 
Sbjct: 443 LTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCV 502

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G  D A  L   ME+N   PN   +  +I      ++     +LL +M  + ++ + S 
Sbjct: 503 KGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLLDEKSY 562

Query: 369 VSM 371
           + +
Sbjct: 563 IYL 565



 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 198/395 (50%), Gaps = 35/395 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +T+NT+I GLC +G + +A     ++  +  + D V+Y +LI+GLC       A +L
Sbjct: 138 PNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQL 197

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKN---------------------------------- 99
              +  + VQP+ V +N+I+D +CK                                   
Sbjct: 198 LKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCI 257

Query: 100 -GKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
            G++ EA  LL  M+  ++ P  +T+S L+D FC  GK+  A+ + G         D V+
Sbjct: 258 MGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVT 317

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN L++GYC  KE+ +A  ++  M S+G+   V +Y T+  GL +I  V+ A+ LFEEM+
Sbjct: 318 YNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMR 377

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  +  TYN+ IDGL K G I   ++L   +       +I  YN ++D LCK+  ++
Sbjct: 378 CRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVD 437

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A+ L  +L  + +  D+ TY ++I GLC  G+++ A  +F D+       +V  +  +I
Sbjct: 438 KAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMI 497

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            GF         + LL KM++   +P+A    +V+
Sbjct: 498 QGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVI 532



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 189/363 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  + +N I+  L K      A +L  QM+   I  D  T+N LI+        + +  +
Sbjct: 68  PPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSV 127

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +++ +G  P+ +TFN ++  LC  G + +A    D +V +    +  +Y TL++G C 
Sbjct: 128 FGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCK 187

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+I  A +L   ++    + + V YN++I+  CK K V +A  LY +MV+K I P   T
Sbjct: 188 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFT 247

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            N+L  G   + Q++ A+ L  +M  +++     T++  +D  CK G + EA  +     
Sbjct: 248 CNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTM 307

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                LD+  YN L+DG C    +  A ++F S+  R ++A+V +Y  MI+GLC    +D
Sbjct: 308 KKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVD 367

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A +LF +M    + PNV+ + +LI G  ++ K S V++L+ +M ++   P+    + ++
Sbjct: 368 EAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSIL 427

Query: 374 DLL 376
           D L
Sbjct: 428 DAL 430



 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 166/330 (50%)

Query: 45  ENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDE 104
           +N  P ++ +N ++  L  A   + A  L  +M   G+     TFN++++   + G    
Sbjct: 64  KNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSL 123

Query: 105 ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
           +  +   ++++   PNA T++TL+ G CL G I++A      + + G   D VSY  LIN
Sbjct: 124 SFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLIN 183

Query: 165 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAA 224
           G CK   +  AL L + +  K ++P  V YN +   + +   V  A  L+ +M    ++ 
Sbjct: 184 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISP 243

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           D  T N+ I G C  G + EAV L   + +      +  ++ L+D  CK G+++ A  + 
Sbjct: 244 DDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMML 303

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
               ++ ++ DVVTYN ++ G C   +++KA D+F  M    V  NV  + T+I+G  +I
Sbjct: 304 GVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKI 363

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
               + + L  +M+ +K++P+    + ++D
Sbjct: 364 KMVDEAVNLFEEMRCRKIIPNVVTYNSLID 393



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 123/269 (45%)

Query: 106 SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILING 165
           S    L+  ++  P    ++ ++         + A  L   ME  G   D  ++NILIN 
Sbjct: 55  SSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINC 114

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
           + +      + S++ +++ KG  P  +T+NTL  GL     +  AL   +++       D
Sbjct: 115 FSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLD 174

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
             +Y T I+GLCK G I  A++L + +     + +   YN +ID +CK+  +  A +L+ 
Sbjct: 175 QVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYS 234

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            +  + +  D  T N +I+G C  GQ+ +A  L   M    + P +  F  L+  F +  
Sbjct: 235 QMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEG 294

Query: 346 KPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           K  +   +L    +K ++ D    + ++D
Sbjct: 295 KVKEAKMMLGVTMKKDIILDVVTYNSLMD 323


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 129/349 (36%), Positives = 203/349 (58%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTYNT+++  C+ G V +A  L   M G+ + P + TYN+LI+GLC    +  AKR+  E
Sbjct: 260 VTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDE 319

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+  G+ P+  TFN ++ E C+   + EA R+ + M+QR V P+  ++S+++  F   G+
Sbjct: 320 MLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGE 379

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           + RA   F  M+ +G   D V Y ILINGYC+N +V  AL +  EMV +G    VVTYNT
Sbjct: 380 LGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNT 439

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  GL     ++ A +LF+EM    V  D  T  T I G CK+G + +A+ LF T+ +  
Sbjct: 440 LLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRS 499

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            + D+  YN L+DG CK G +E A EL+  +  R +    ++++I+I+G C+ G + +A 
Sbjct: 500 LKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAF 559

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            L+ +M+E  + P ++   T+I G++R    SK  + L+ M  + V PD
Sbjct: 560 RLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPD 608



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 184/350 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T N +++ LCK+G +D       +M+ + +  D+VTYN+L++  C     +EA  L 
Sbjct: 223 NVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLV 282

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M  +G++P + T+N +++ LCK G  + A R+LD M+   + PNA T++ ++   C  
Sbjct: 283 DCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRK 342

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
             +  AE +F  M   G   D +S++ ++  + +N E+  AL+ + +M   G+ P  V Y
Sbjct: 343 EDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIY 402

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  G      V  ALK+  EM       D  TYNT ++GLC+   + +A ELF+ +  
Sbjct: 403 TILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVE 462

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D      LI G CK G +  AL LF ++  R L  DVVTYN ++ G C  G+M+K
Sbjct: 463 RGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEK 522

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           A +L+ DM    + P+ I F  LI+GF  +   S+   L  +MKEK + P
Sbjct: 523 AKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKP 572



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 201/397 (50%), Gaps = 35/397 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP   TYN +I+GLCKEG  ++AK +  +M G  + P+  T+N ++   C   D  EA+R
Sbjct: 291 KPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAER 350

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM+ +GV P +++F+ I+    +NG++  A    + M    + P+   Y+ L++G+C
Sbjct: 351 VFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYC 410

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI----- 187
               ++ A ++   M   GC  D V+YN L+NG C+ K +++A  L++EMV +G+     
Sbjct: 411 RNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFY 470

Query: 188 ------------------------------KPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
                                         KP VVTYNTL  G  ++ ++E A +L+ +M
Sbjct: 471 TLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDM 530

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
              ++     +++  I+G C  G + EA  L+  +     +  +   N +I G  ++G L
Sbjct: 531 ISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNL 590

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A +   ++    +  D +TYN +I+    +   D+A  L  +MEE  + PN++ +  +
Sbjct: 591 SKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAI 650

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + GF R  +  +   +LHKM +K + PD S  + +++
Sbjct: 651 LGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLIN 687



 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 196/357 (54%), Gaps = 2/357 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GVV  P+ +++++I+    + G + +A A F +MKG  + PD V Y  LI+G C  +D +
Sbjct: 359 GVV--PDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVS 416

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A ++  EM+++G    VVT+N +++ LC+   +D+A  L   MV+R V P+ +T +TL+
Sbjct: 417 GALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLI 476

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G+C  G + +A  LF +M     K D V+YN L++G+CK  E+E+A  L+ +M+S+ I 
Sbjct: 477 HGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIF 536

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P+ ++++ L  G   +  V  A +L++EM+   +     T NT I G  + G + +A + 
Sbjct: 537 PSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDF 596

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
             T+       D   YN LI+   K    + A  L  ++  R L+ ++VTYN ++ G   
Sbjct: 597 LNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSR 656

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            G+M +A  +   M +  + P+   + +LI+G+V  +   +   +  +M ++  +PD
Sbjct: 657 HGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 197/357 (55%), Gaps = 4/357 (1%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQ-MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           N ++  + K G+VD A  ++   +K  NI  +V T N +++ LC     +       EM 
Sbjct: 193 NALLGAIVKVGWVDLAWKVYEDFVKSGNI-VNVYTLNIMVNALCKDGKLDNVGVYLSEME 251

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           ++GV   +VT+N +++  C+ G + EA  L+D M  + ++P  FTY+ L++G C  G   
Sbjct: 252 EKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYE 311

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
           RA+ +   M  +G   +  ++N ++   C+ ++V EA  ++ EM+ +G+ P +++++++ 
Sbjct: 312 RAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSI- 370

Query: 199 LGLFEIH-QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
           +G+F  + ++  AL  FE+M+   +  DT  Y   I+G C+N  +  A+++   +    C
Sbjct: 371 VGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGC 430

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
            +D+  YN L++GLC+   L+ A ELF+ +  R +  D  T   +IHG C DG M KA  
Sbjct: 431 VMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALS 490

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           LF  M   ++ P+V+ + TL+ GF ++ +  K  EL + M  +++ P     S++++
Sbjct: 491 LFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILIN 547



 Score =  141 bits (355), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 157/359 (43%), Gaps = 35/359 (9%)

Query: 51  VVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD 110
           VV ++ LI     A    E    F  +  +G   S+   N ++  + K G +D A ++ +
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
             V+     N +T + +++  C  GK++        ME  G   D V+YN L+N YC+  
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL------------------- 211
            V EA  L   M  KG+KP + TYN L  GL +    E A                    
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 212 ----------------KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
                           ++F EM +  V  D  ++++ +    +NG +  A+  F  +  +
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
               D   Y  LI+G C++  +  AL++   +  R  V DVVTYN +++GLC    +D A
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDA 453

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +LF +M E  V P+     TLIHG+ +    +K + L   M  + + PD    + ++D
Sbjct: 454 DELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMD 512



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 146/333 (43%), Gaps = 29/333 (8%)

Query: 48  NPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR 107
           NP ++   +LIH L  +    EA+ L   ++ +     V   + ++     N   ++   
Sbjct: 98  NPSIIA--TLIHFLVQSKKLPEAQSLLLRIIRKSGVSHVEVIDSLISTSSSNLNSNQNVV 155

Query: 108 LLDLMVQ-----RDVRPNAFTYSTLMD-GFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           + DL+++     R +R  +  +  L   GFC++  IN    L G++  +G          
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVS--INACNALLGAIVKVGW--------- 204

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
                     V+ A  +Y + V  G    V T N +   L +  ++++      EM+   
Sbjct: 205 ----------VDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKG 254

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           V AD  TYNT ++  C+ G + EA  L   +     +  +  YN LI+GLCK G  E A 
Sbjct: 255 VYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAK 314

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            +   +    L  +  T+N M+   C    + +A  +F +M +  V P++I F +++  F
Sbjct: 315 RVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVF 374

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            R  +  + +    KMK   ++PD  I +++++
Sbjct: 375 SRNGELGRALAYFEKMKGVGLVPDTVIYTILIN 407



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 77/144 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VT NTII G  + G + KA      M  E + PD +TYN+LI+      +++ A  
Sbjct: 571 KPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFF 630

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M ++G+ P++VT+N I+    ++G+M EA  +L  M+ + + P+  TY++L++G+ 
Sbjct: 631 LINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYV 690

Query: 133 LTGKINRAEELFGSMESMGCKHDD 156
               +  A  +   M   G   DD
Sbjct: 691 SKDNMKEAFRVHDEMLQRGFVPDD 714


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 128/365 (35%), Positives = 206/365 (56%), Gaps = 7/365 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+   YN +I GLCK G +D A+ +   M   +  PDV+TY SLI G C  N  +EA+
Sbjct: 123 CHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEAR 182

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  +M + G+ P  V +N +++ LCK  +++E S+LL+ MV+    P+ F+Y+T++   
Sbjct: 183 KLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACL 242

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +GK   A ++   M    C  D V+YN L++G+CK  +++EA  L  +MV +   PTV
Sbjct: 243 CESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTV 302

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY TL  G     ++  A ++ E+M +  ++ D  TYN  +DGLCK G + EA EL   
Sbjct: 303 ITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEV 362

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  D+  Y+ L++GLCK G+++ A  L   +  R    ++VT+N MI G C  G+
Sbjct: 363 MVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGK 422

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD-ASIVS 370
           +D+ H +   M+E +  P+V+ + TLI G+ + N+      +L       + PD AS  S
Sbjct: 423 VDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILG------ISPDKASYSS 476

Query: 371 MVVDL 375
           M+  L
Sbjct: 477 MLEGL 481



 Score =  231 bits (590), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 200/360 (55%), Gaps = 6/360 (1%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G  C P  +TY T+I G  +   +  A  +   M    I+PD+VTYN L+ GLC A   
Sbjct: 294 VGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKL 353

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA  L   M+++   P VVT++++++ LCK GK+D+A  LL++M++R  +PN  T++T+
Sbjct: 354 EEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTM 413

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DGFC  GK++   ++   M+ + C  D V+Y+ LI+GYCK   +++A ++       GI
Sbjct: 414 IDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GI 467

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P   +Y+++  GL    +VE A ++ + M +      +S Y   I GLC      EA++
Sbjct: 468 SPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALK 527

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           + + +    CE ++  Y+ LI+GLCK+ R+E A+ +   +  +  V DV TY  +I G C
Sbjct: 528 MLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFC 587

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
              +MD A+  F  M ++   P+ + +  LI GF +     K IE++  M EK   PDA+
Sbjct: 588 KINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAA 647



 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 134/397 (33%), Positives = 201/397 (50%), Gaps = 39/397 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN-INPDVVTYNSLIHGLCHANDWNEAKR 72
           P+ +T+NTI+   C+ G +D+A + F   +G+   +P   TY  LIHGLC     +EA +
Sbjct: 57  PDVITHNTILKAYCQIGDLDRALSHF---RGKMWCSPTAFTYCILIHGLCQCQRIDEAYQ 113

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+ +   P    +N ++  LCK GK+D A  +L +M++R   P+  TY++L+ G C
Sbjct: 114 LLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCC 173

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            T  ++ A +L   M+  G   D V+YN L+NG CK  ++EE   L  EMV  G +P   
Sbjct: 174 QTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTF 233

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNT+   L E  + E A K+ E+M       D  TYN+ +DG CK   + EA  L   +
Sbjct: 234 SYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDM 293

Query: 253 GILKC-----------------------------------ELDIQAYNCLIDGLCKSGRL 277
              +C                                     D+  YNCL+DGLCK+G+L
Sbjct: 294 VGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKL 353

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           E A EL   +  +    DVVTY+I+++GLC  G++D A  L   M E    PN++ F T+
Sbjct: 354 EEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTM 413

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           I GF +  K  +  ++L  MKE    PD    S ++D
Sbjct: 414 IDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLID 450



 Score =  227 bits (578), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 117/354 (33%), Positives = 197/354 (55%), Gaps = 6/354 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYN+++DG CK   +D+A+ L   M G    P V+TY +LI G   A+   +A 
Sbjct: 263 CGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAY 322

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R+  +M   G+ P +VT+N ++D LCK GK++EA  LL++MV++D  P+  TYS L++G 
Sbjct: 323 RVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGL 382

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK++ A  L   M   GC+ + V++N +I+G+CK  +V+E   +   M      P V
Sbjct: 383 CKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDV 442

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+TL  G  + ++++ A  +        ++ D ++Y++ ++GLC  G + EA E+   
Sbjct: 443 VTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDL 496

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C      Y  +I GLC   R + AL++ + +  R    ++ TY+I+I+GLC   +
Sbjct: 497 MTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKR 556

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++ A ++   M E    P+V  + +LI GF +INK     +    M++    PD
Sbjct: 557 VEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPD 610



 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 201/400 (50%), Gaps = 41/400 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY ++I G C+   +D+A+ L  +MK   + PD V YN+L++GLC  N   E  
Sbjct: 158 CVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVS 217

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  EM++ G +P   ++N ++  LC++GK +EA ++L+ M+++   P+  TY++LMDGF
Sbjct: 218 KLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGF 277

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++ AE L   M    C    ++Y  LI G+ +   + +A  +  +M   GI P +
Sbjct: 278 CKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDL 337

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY---------------------- 229
           VTYN L  GL +  ++E A +L E M   D A D  TY                      
Sbjct: 338 VTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEM 397

Query: 230 -------------NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
                        NT IDG CK G + E  ++   +  + C  D+  Y+ LIDG CK+ R
Sbjct: 398 MLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANR 457

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           ++ A  +    P      D  +Y+ M+ GLC+ G++++A ++   M +    P    +  
Sbjct: 458 MQDAFAILGISP------DKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYAL 511

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +I G   + +  + +++L  M E+   P+    S++++ L
Sbjct: 512 IIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGL 551



 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 200/362 (55%), Gaps = 6/362 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+T +YNT++  LC+ G  ++A  +  +M  +   PDVVTYNSL+ G C  +  +EA+R
Sbjct: 229 EPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAER 288

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ +   P+V+T+  ++    +  ++ +A R+++ M +  + P+  TY+ L+DG C
Sbjct: 289 LLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLC 348

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A EL   M    C  D V+Y+IL+NG CK  +V++A  L   M+ +G +P +V
Sbjct: 349 KAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLV 408

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NT+  G  +  +V+   K+ E M+      D  TY+T IDG CK   + +A   F  L
Sbjct: 409 TFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDA---FAIL 465

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           GI     D  +Y+ +++GLC +G++E A E+   + ++        Y ++I GLC+  + 
Sbjct: 466 GI---SPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERG 522

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A  +   M E    PN+  +  LI+G  +  +    I +L  M EK  +PD +  + +
Sbjct: 523 DEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSL 582

Query: 373 VD 374
           +D
Sbjct: 583 ID 584



 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 111/329 (33%), Positives = 182/329 (55%), Gaps = 6/329 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYN ++DGLCK G +++A  L   M  ++  PDVVTY+ L++GLC     ++A+ L
Sbjct: 335 PDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLL 394

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+++G QP++VTFN ++D  CK GK+DE  ++L+LM +    P+  TYSTL+DG+C 
Sbjct: 395 LEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYC- 453

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K NR ++ F  +   G   D  SY+ ++ G C   +VEEA  +   M  +G  PT   
Sbjct: 454 --KANRMQDAFAIL---GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSH 508

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  +  GL ++ + + ALK+ + M       +  TY+  I+GLCK   + +A+ +   + 
Sbjct: 509 YALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVML 568

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D+  Y  LIDG CK  +++ A + F+++       D + YNI+I G C  G ++
Sbjct: 569 EKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVE 628

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           KA ++   M E    P+   + +L+    
Sbjct: 629 KAIEVMQLMLEKGCNPDAATYFSLMRSLT 657



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 167/340 (49%), Gaps = 2/340 (0%)

Query: 37  ALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
           + F +   +   P   TY +LI G   A +      +  EM+ +   P V+T N I+   
Sbjct: 10  SFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAY 69

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           C+ G +D A  L     +    P AFTY  L+ G C   +I+ A +L   M    C  D 
Sbjct: 70  CQIGDLDRA--LSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDA 127

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
             YN LI G CK  +++ A ++ + M+ +   P V+TY +L +G  + + ++ A KL E+
Sbjct: 128 AVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEK 187

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M+   +  DT  YN  ++GLCK   + E  +L   +     E D  +YN ++  LC+SG+
Sbjct: 188 MKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGK 247

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
            E A ++   +  +    DVVTYN ++ G C   +MD+A  L  DM     AP VI + T
Sbjct: 248 YEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTT 307

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           LI GF R ++ +    ++  M +  + PD    + ++D L
Sbjct: 308 LIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGL 347



 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 2/296 (0%)

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           E    F E      +PS  T+  ++    + G       + + M+ R   P+  T++T++
Sbjct: 7   EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
             +C  G ++RA   F     M C     +Y ILI+G C+ + ++EA  L  EM+ K   
Sbjct: 67  KAYCQIGDLDRALSHFRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCH 124

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P    YN L  GL ++ +++ A  + + M       D  TY + I G C+   + EA +L
Sbjct: 125 PDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKL 184

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +       D  AYN L++GLCK  +LE   +L   +       D  +YN ++  LC 
Sbjct: 185 MEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCE 244

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            G+ ++A  +   M E    P+V+ + +L+ GF +++K  +   LL  M  ++  P
Sbjct: 245 SGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAP 300


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  244 bits (624), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 130/323 (40%), Positives = 190/323 (58%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G+  KPN V YNTIIDGLCK   VD A  L  +M+ + I PDVVTYNSLI GLC +  W
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A R+   M  + + P V TFN ++D   K G++ EA    + M++R + P+  TYS L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G C+  +++ AEE+FG M S GC  D V+Y+ILINGYCK+K+VE  + L+ EM  +G+
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
               VTY  L  G     ++  A ++F  M    V  +  TYN  + GLC NG I +A+ 
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +   +     + DI  YN +I G+CK+G +  A +++ SL  + L+ D+ TY  M+ GL 
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLY 477

Query: 308 NDGQMDKAHDLFLDMEENAVAPN 330
             G   +A  LF  M+E+ + PN
Sbjct: 478 KKGLRREADALFRKMKEDGILPN 500



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 121/357 (33%), Positives = 201/357 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT+ ++++G C+   V  A  +F QM G    P+VV YN++I GLC +   + A  
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALD 207

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M   G+ P VVT+N ++  LC +G+  +A+R++  M +R++ P+ FT++ L+D   
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV 267

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ AEE +  M       D V+Y++LI G C    ++EA  ++  MVSKG  P VV
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV 327

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L  G  +  +VEH +KLF EM +  V  +T TY   I G C+ G +  A E+FR +
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +I  YN L+ GLC +G++E AL +   + +  + AD+VTYNI+I G+C  G++
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEV 447

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
             A D++  +    + P++  + T++ G  +     +   L  KMKE  ++P+   V
Sbjct: 448 ADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNECYV 504



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 186/357 (52%), Gaps = 2/357 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   ++ ++  + K    D    L+ QM+   I  ++ T N L++  C  +  + A   
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+  G +PS+VTF  +++  C+  ++ +A  + D MV    +PN   Y+T++DG C 
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           + +++ A +L   ME  G   D V+YN LI+G C +    +A  +   M  + I P V T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L     +  +V  A + +EEM R  +  D  TY+  I GLC    + EA E+F  + 
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D+  Y+ LI+G CKS ++E  ++LF  + +R +V + VTY I+I G C  G+++
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            A ++F  M    V PN+I +  L+HG     K  K + +L  M++  +  DA IV+
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM--DADIVT 433



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 168/334 (50%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D +  LF  M      P +  ++ L+  +     ++    L+ +M   G+  ++ T N+
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C+  ++  A   L  M++    P+  T+ +L++GFC   ++  A  +F  M  MG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            K + V YN +I+G CK+K+V+ AL L   M   GI P VVTYN+L  GL    +   A 
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           ++   M + ++  D  T+N  ID   K G + EA E +  +     + DI  Y+ LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C   RL+ A E+F  +  +    DVVTY+I+I+G C   +++    LF +M +  V  N 
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + +  LI G+ R  K +   E+  +M    V P+
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPN 395



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 162/301 (53%)

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LFF M+     PS+  F+ ++  + K  K D    L + M    +  N  T + L++ FC
Sbjct: 68  LFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +++ A    G M  +G +   V++  L+NG+C+   V +AL ++ +MV  G KP VV
Sbjct: 128 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVV 187

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YNT+  GL +  QV++AL L   M++D +  D  TYN+ I GLC +G   +A  +   +
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM 247

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   D+  +N LID   K GR+  A E +  + RR L  D+VTY+++I+GLC   ++
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRL 307

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A ++F  M      P+V+ +  LI+G+ +  K    ++L  +M ++ V+ +    +++
Sbjct: 308 DEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTIL 367

Query: 373 V 373
           +
Sbjct: 368 I 368



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 144/284 (50%), Gaps = 4/284 (1%)

Query: 95  ELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
           E+ +NG    K+D++  L   MVQ    P+   +S L+       K +    L+  M+ +
Sbjct: 51  EMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G  H+  + NIL+N +C+  ++  ALS   +M+  G +P++VT+ +L  G     +V  A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           L +F++M       +   YNT IDGLCK+  +  A++L   +       D+  YN LI G
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LC SGR   A  +   + +R +  DV T+N +I     +G++ +A + + +M   ++ P+
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           ++ +  LI+G    ++  +  E+   M  K   PD    S++++
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILIN 334



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 107/232 (46%), Gaps = 20/232 (8%)

Query: 163 INGYCKNKEVEEALSLYREMVSKGIK--------------------PTVVTYNTLFLGLF 202
           I G+C ++      S YREM+  GI+                    P++  ++ L   + 
Sbjct: 33  ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ 262
           ++ + +  + L+E+MQ   +  +  T N  ++  C+   +  A+     +  L  E  I 
Sbjct: 93  KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV 152

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
            +  L++G C+  R+  AL +F  +       +VV YN +I GLC   Q+D A DL   M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           E++ + P+V+ + +LI G     + S    ++  M ++++ PD    + ++D
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALID 264


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  244 bits (624), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 134/364 (36%), Positives = 206/364 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN +TY T+I  LC+ G +D A   F QM  + + PD   Y+ LI G C      +AK 
Sbjct: 426 KPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKE 485

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  E+M+ G+   +V F+ I++ LCK G++ +A  + DL V   + P A  YS LMDG+C
Sbjct: 486 LISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYC 545

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK+ +A  +F +M S G + +DV Y  L+NGYCK   ++E LSL+REM+ KGIKP+ +
Sbjct: 546 LVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTI 605

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN +  GLFE  +   A   F EM    +A +  TY+  + GL KN    EA+ LF+ L
Sbjct: 606 LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKEL 665

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  ++DI   N +I G+ ++ R+E A +LF S+ R  LV  VVTY+IMI  L  +G +
Sbjct: 666 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLV 725

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A D+F  M+     P+  +   ++   ++ N+  +    L K+ E+    +     ++
Sbjct: 726 EEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLL 785

Query: 373 VDLL 376
           VDL 
Sbjct: 786 VDLF 789



 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 129/406 (31%), Positives = 208/406 (51%), Gaps = 35/406 (8%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
            E G VC P+ V YNT+IDG  KEG V+KA  LF +M    I PD VTY+S++H LC A 
Sbjct: 209 AEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKAR 268

Query: 66  -----------------------------------DWNEAKRLFFEMMDQGVQPSVVTFN 90
                                               W EA R+F EM  Q + P VVTFN
Sbjct: 269 AMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFN 328

Query: 91  VIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
           ++M  LCK GK+ EA  + D M  +   P+ F+Y+ +++G+   G +    +LF  M   
Sbjct: 329 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD 388

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G      ++N+LI  Y     +++A+ ++ EM   G+KP V+TY T+   L  I +++ A
Sbjct: 389 GIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDA 448

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           ++ F +M    VA D   Y+  I G C +G +++A EL   +      LDI  ++ +I+ 
Sbjct: 449 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINN 508

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LCK GR+  A  +F       L    V Y++++ G C  G+M+KA  +F  M    + PN
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 568

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +++ TL++G+ +I +  + + L  +M +K + P   + ++++D L
Sbjct: 569 DVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 614



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 188/358 (52%), Gaps = 3/358 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           V  P + TY  ++D   +    + A A F Q+    +  D++  N L+ G C A   +EA
Sbjct: 106 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEA 165

Query: 71  KRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV--RPNAFTYSTL 127
             +      + G  P V ++++++  LC  GK  +A  LL +M +      P+   Y+T+
Sbjct: 166 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTV 225

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DGF   G +N+A +LF  M   G   D V+Y+ +++  CK + +++A +  R+MV+KG+
Sbjct: 226 IDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 285

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P   TYN L  G     Q + A+++F+EM+R  +  D  T+N  +  LCK G I EA +
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARD 345

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +F T+ +     D+ +YN +++G    G L    +LF  +    +   + T+N++I    
Sbjct: 346 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYA 405

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           N G +DKA  +F +M ++ V PNV+ + T+I    RI K    +E  ++M ++ V PD
Sbjct: 406 NCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 463



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 116/238 (48%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V   P  V Y+ ++DG C  G ++KA  +F  M    I P+ V Y +L++G C     
Sbjct: 526 VNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRI 585

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +E   LF EM+ +G++PS + +N+I+D L + G+   A      M +  +  N  TYS +
Sbjct: 586 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 645

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G       + A  LF  + +M  K D ++ N +I G  + + VEEA  L+  +   G+
Sbjct: 646 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 705

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            P VVTY+ +   L +   VE A  +F  MQ      D+   N  +  L K   IV A
Sbjct: 706 VPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 763



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 121/269 (44%), Gaps = 44/269 (16%)

Query: 115 RDVRPNAFTYSTLMD-----------------------------------GFCLTGKINR 139
           R + P + TY+ LMD                                   GFC   + + 
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 164

Query: 140 AEE-LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI--KPTVVTYNT 196
           A + L      +GC  D  SY+IL+   C   +  +A  L R M   G    P VV YNT
Sbjct: 165 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNT 224

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---G 253
           +  G F+   V  A  LF+EM +  +  D  TY++ +  LCK   + +A    R +   G
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +L    +   YN LI G   +G+ + A+ +F+ + R+ ++ DVVT+N+++  LC  G++ 
Sbjct: 285 VLP---NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIK 341

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           +A D+F  M      P+V  +  +++G+ 
Sbjct: 342 EARDVFDTMAMKGQNPDVFSYNIMLNGYA 370



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 114/237 (48%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V Y T+++G CK G +D+  +LF +M  + I P  + YN +I GL  A     AK 
Sbjct: 566 EPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 625

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM + G+  +  T+++++  L KN   DEA  L   +   +V+ +  T +T++ G  
Sbjct: 626 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 685

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            T ++  A++LF S+   G     V+Y+I+I    K   VEEA  ++  M + G +P   
Sbjct: 686 QTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSR 745

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             N +   L + +++  A     ++   + + +  T    +D     G   E +   
Sbjct: 746 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  244 bits (624), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 122/282 (43%), Positives = 178/282 (63%), Gaps = 2/282 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE G  C+P+ VTY+TIID LCK+  V++A  +F  MK + I+P++ TYNSLI GLC+ +
Sbjct: 37  GEAG--CQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFS 94

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            W EA  +  EMM   + P++VTF+++++  CK G + EA  +L  M +  V PN  TYS
Sbjct: 95  RWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYS 154

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           +LM+G+ L  ++  A +LF  M + GCK D  SYNILINGYCK K + EA  L+ EM+ +
Sbjct: 155 SLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQ 214

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G+ P +V+YNTL  GL ++ ++  A  LF+ M  +    D  TY+  +DG CK GY+ +A
Sbjct: 215 GLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKA 274

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
             LFR +     + ++  YN LID +CKS  L+ A +LF  L
Sbjct: 275 FRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSEL 316



 Score =  197 bits (500), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 109/324 (33%), Positives = 175/324 (54%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           M      PDV TY ++I+GLC   +   A  LF +M + G QP VVT++ I+D LCK+ +
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           ++EA  +   M  + + PN FTY++L+ G C   +   A  +   M S+    + V++++
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LIN +CK   V EA  + + M   G++P VVTY++L  G     +V  A KLF+ M    
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              D  +YN  I+G CK   I EA +LF  +       DI +YN LIDGLC+ GRL  A 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           +LF+++     + D+ TY+I++ G C  G + KA  LF  M+   + PN++++  LI   
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300

Query: 342 VRINKPSKVIELLHKMKEKKVMPD 365
            +     +  +L  ++  + + P+
Sbjct: 301 CKSRNLKEARKLFSELFVQGLQPN 324



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 163/304 (53%), Gaps = 8/304 (2%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+ +G QP V T+  I++ LCK G+   A+ L   M +   +P+  TYST++D  C   +
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +N A ++F  M++ G   +  +YN LI G C      EA ++  EM+S  I P +VT+ +
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTF-S 119

Query: 197 LFLGLF----EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           L + +F     + +    LK   EM    V  +  TY++ ++G      + EA +LF  +
Sbjct: 120 LLINIFCKEGNVFEARGVLKTMTEM---GVEPNVVTYSSLMNGYSLQAEVFEARKLFDVM 176

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C+ D+ +YN LI+G CK+ R+  A +LF  +  + L  D+V+YN +I GLC  G++
Sbjct: 177 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 236

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +AHDLF +M  N   P++  +  L+ GF +    +K   L   M+   + P+  + +++
Sbjct: 237 REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNIL 296

Query: 373 VDLL 376
           +D +
Sbjct: 297 IDAM 300



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 79/140 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+  +YN +I+G CK   + +AK LF +M  + + PD+V+YN+LI GLC      EA 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M+  G  P + T+++++D  CK G + +A RL   M    ++PN   Y+ L+D  
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300

Query: 132 CLTGKINRAEELFGSMESMG 151
           C +  +  A +LF  +   G
Sbjct: 301 CKSRNLKEARKLFSELFVQG 320


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  244 bits (623), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 132/362 (36%), Positives = 201/362 (55%), Gaps = 9/362 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTYNTII+GLCK   +     LF ++     +PDVVTYN+LI  LC A D  EA+RL
Sbjct: 35  PTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRL 94

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR--DVRPNAFTYSTLMDGF 131
             +M  +G  P+VVT++V+++ LCK G++DEA  L+  M ++  DV PN  TY++ +DG 
Sbjct: 95  HGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 154

Query: 132 CLTGKINRAEELFGSME--SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           C       A EL  S+   S+    D V+++ LI+G CK  +++EA S++ +M++ G  P
Sbjct: 155 CKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVP 214

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V+TYN L  GL +  ++E A  + E M    V  D  TY+  +D  CK   + EA+EL 
Sbjct: 215 NVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELL 274

Query: 250 RTLGILKCELDI-----QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
             +    C  ++       +N LI G CK+G  E A  LF  +  + L  DV+T+  +I 
Sbjct: 275 HGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALID 334

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           GLC  GQ++ A D+   M    V PNV+ +  L+HG  +  +  +  + L +M     +P
Sbjct: 335 GLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVP 394

Query: 365 DA 366
           D+
Sbjct: 395 DS 396



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 128/370 (34%), Positives = 201/370 (54%), Gaps = 7/370 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN--INPDVVTYNSLIHGLCHANDWNEAK 71
           PN +TYN+ +DGLCK+    +A  L   ++  +  ++PD VT+++LI GLC     +EA 
Sbjct: 142 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEAC 201

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F +M+  G  P+V+T+N +++ LCK  KM+ A  +++ MV + V P+  TYS L+D F
Sbjct: 202 SVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF 261

Query: 132 CLTGKINRAEELFGSMESMGCKH-----DDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           C   +++ A EL   M S GC       D V++NILI G CK    E+A +L+ EMV+K 
Sbjct: 262 CKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKN 321

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           ++P V+T+  L  GL +  QVE A  + + M    V  +  TYN  + GLCK+G I EA 
Sbjct: 322 LQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEAC 381

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +    +    C  D   Y  L+  LC++ R + AL+L   L       D VTYNI++ GL
Sbjct: 382 QFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGL 441

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              G+ ++A  +  +M      P+   F     G  R    +  +ELL  +  K ++PDA
Sbjct: 442 WKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDA 501

Query: 367 SIVSMVVDLL 376
           +  S ++D +
Sbjct: 502 TTCSSILDWV 511



 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 127/364 (34%), Positives = 195/364 (53%), Gaps = 9/364 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVTYNSLIHGLCHANDWNE 69
           C PN VTY+ +I+GLCK G +D+A+ L  +M  K  ++ P+++TYNS + GLC  +   E
Sbjct: 103 CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE 162

Query: 70  AKRLFFEMMDQG--VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           A  L   + D    V P  VTF+ ++D LCK G++DEA  + D M+     PN  TY+ L
Sbjct: 163 ACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNAL 222

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++G C   K+ RA  +  SM   G   D ++Y++L++ +CK   V+EAL L   M S+G 
Sbjct: 223 VNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGC 282

Query: 188 KPTV-----VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
            P V     VT+N L  G  +    E A  LFEEM   ++  D  T+   IDGLCK G +
Sbjct: 283 TPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQV 342

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
             A ++   +G L    ++  YN L+ GLCKSGR+E A +    +     V D +TY  +
Sbjct: 343 EAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSL 402

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           ++ LC   + D A  L  +++     P+ + +  L+ G  +  K  + I +L +M  K  
Sbjct: 403 VYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGH 462

Query: 363 MPDA 366
            PD+
Sbjct: 463 QPDS 466



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 175/336 (52%), Gaps = 10/336 (2%)

Query: 51  VVTYNSLIHGLCHANDWNEAKRLFF-EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
           V  YN ++  LC A D   A  +F  EM   GV P++VT+N I++ LCK+  +     L 
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
           + +V+R   P+  TY+TL+D  C  G +  A  L G M S GC  + V+Y++LING CK 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 170 KEVEEALSLYREMVSKG--IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD--VAAD 225
             ++EA  L +EM  K   + P ++TYN+   GL +      A +L   ++     V+ D
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
           T T++T IDGLCK G I EA  +F  +       ++  YN L++GLCK+ ++E A  +  
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII-----FVTLIHG 340
           S+  + +  DV+TY++++   C   ++D+A +L   M      PNV++     F  LI G
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAG 300

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +     +   L  +M  K + PD      ++D L
Sbjct: 301 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGL 336



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 170/315 (53%), Gaps = 5/315 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +TYN +++GLCK   +++A A+   M  + + PDV+TY+ L+   C A+  +EA  L
Sbjct: 214 PNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 273

Query: 74  FFEMMDQGVQPSV-----VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
              M  +G  P+V     VTFN+++   CK G  ++AS L + MV ++++P+  T+  L+
Sbjct: 274 LHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALI 333

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C  G++  A ++   M ++G   + V+YN L++G CK+  +EEA     EMVS G  
Sbjct: 334 DGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCV 393

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  +TY +L   L    + + AL+L  E++      DT TYN  +DGL K+G   +A+ +
Sbjct: 394 PDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITV 453

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +     + D   +     GL +SG L   +EL R +  + ++ D  T + ++  +C 
Sbjct: 454 LEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCR 513

Query: 309 DGQMDKAHDLFLDME 323
            G++D    +  + E
Sbjct: 514 SGKLDDVKAMIKEFE 528



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 73/137 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+++TY +++  LC+    D A  L  ++K    +PD VTYN L+ GL  +    +A 
Sbjct: 392 CVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAI 451

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  EM+ +G QP   TF      L ++G +     LL +++ + + P+A T S+++D  
Sbjct: 452 TVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWV 511

Query: 132 CLTGKINRAEELFGSME 148
           C +GK++  + +    E
Sbjct: 512 CRSGKLDDVKAMIKEFE 528


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  244 bits (623), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 128/320 (40%), Positives = 191/320 (59%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           V C+P+ V YNTI+D LCK+  V++A  +F +MKG  I P VVTY SLIHGL +   W E
Sbjct: 225 VGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKE 284

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  L  EM    + P +V F+V++D +CK G++ EA  +L  M +  V P+  TY+TLM+
Sbjct: 285 AFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMN 344

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+CL  ++  A ++F  M S G   D  S++IL+NGYCK K ++EA  L+ EM  +G+ P
Sbjct: 345 GYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIP 404

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             V+YNTL  GL +  +   A +LF++M  +    +  TY+  +D L K GY+ +A+ LF
Sbjct: 405 DTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLF 464

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           R +     + D+  YN +IDG+CK G+ + A ELF  L  + L  +       I G+C  
Sbjct: 465 RAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKG 524

Query: 310 GQMDKAHDLFLDMEENAVAP 329
           G +D+AH  F  ME++  +P
Sbjct: 525 GLLDEAHKAFRQMEKDDCSP 544



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/331 (35%), Positives = 181/331 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN  +Y+ II GLC+ G   +   L   MK     PDVV YN+++  LC     NEA  
Sbjct: 193 KPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVH 252

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +M   G+ P+VVT+  ++  L   G+  EA  LL+ M   ++ P+   +S L+D  C
Sbjct: 253 IFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMC 312

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ A  +  +M  MG + D  +YN L+NGYC   EV EA  ++  M+SKG  P V 
Sbjct: 313 KEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVF 372

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +++ L  G  +  +++ A +LF+EM    +  DT +YNT I GLC+    +EA ELF+ +
Sbjct: 373 SFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDM 432

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++  Y+ L+D L K G L+ A+ LFR++    L  D+VTYNIMI G+C  G+ 
Sbjct: 433 HSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKF 492

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
             A +LF ++    + PN  +    I G  +
Sbjct: 493 KDARELFAELSVKGLQPNNWVCTPTIDGVCK 523



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 191/363 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +  +   L +        +L  QM+   I+ DV++   LI+  C     +    +
Sbjct: 89  PSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSV 148

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G++P+V+TF+ +++  C  GK+  A  L D+MV R  +PN  +YS ++ G C 
Sbjct: 149 LGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCR 208

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK     +L   M+ +GC+ D V YN +++  CK++ V EA+ ++ +M   GI PTVVT
Sbjct: 209 VGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVT 268

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +L  GL  + + + A  L  EM+  ++  D   ++  ID +CK G + EA  + +T+ 
Sbjct: 269 YTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMT 328

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  E D+  YN L++G C    +  A ++F  +  +  + DV +++I+++G C   ++D
Sbjct: 329 EMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRID 388

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  LF +M    + P+ + + TLI G  +  +P +  EL   M      P+    S+++
Sbjct: 389 EAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILL 448

Query: 374 DLL 376
           D L
Sbjct: 449 DCL 451



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 185/362 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +T++T+I+G C EG + +A  LF  M      P+V +Y+ +I GLC      E  +
Sbjct: 158 EPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIK 217

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M   G +P VV +N I+D LCK+  ++EA  +   M    + P   TY++L+ G  
Sbjct: 218 LLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLR 277

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+   A  L   M+      D V++++LI+  CK  EV EA  + + M   G++P V 
Sbjct: 278 NLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVA 337

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G     +V  A K+FE M       D  +++  ++G CK   I EA +LF  +
Sbjct: 338 TYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEM 397

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D  +YN LI GLC++ R   A ELF+ +       ++VTY+I++  L   G +
Sbjct: 398 THRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYL 457

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A  LF  ME + + P+++ +  +I G  +  K     EL  ++  K + P+  + +  
Sbjct: 458 DQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPT 517

Query: 373 VD 374
           +D
Sbjct: 518 ID 519



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 130/266 (48%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +++A    + MV  +  P+   +  L               L   ME  G  HD +S  I
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LIN +C+   V+   S+  +++  G++P V+T++TL  G     ++  A++LF+ M    
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              +  +Y+  I GLC+ G   E ++L   + ++ CE D+  YN ++D LCK   +  A+
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            +F  +    ++  VVTY  +IHGL N G+  +A  L  +M+   + P+++ F  LI   
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 342 VRINKPSKVIELLHKMKEKKVMPDAS 367
            +  + S+   +L  M E  V PD +
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVA 337



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 110/242 (45%), Gaps = 35/242 (14%)

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
           + + +ALS +  MV+    P++V +  LF  L  +   +  + L ++M+   ++ D  + 
Sbjct: 70  RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
              I+  C+  ++     +   +  L  E ++  ++ LI+G C  G++  A+ELF  +  
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189

Query: 290 RVLVADVVTYNIMIHGLCNDGQ-----------------------------------MDK 314
           R    +V +Y+I+I GLC  G+                                   +++
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNE 249

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  +F  M+   + P V+ + +LIHG   + +  +   LL++MK   +MPD    S+++D
Sbjct: 250 AVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLID 309

Query: 375 LL 376
           ++
Sbjct: 310 IM 311



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 38/73 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTYN +IDG+CK G    A+ LF ++  + + P+       I G+C     +EA +
Sbjct: 473 KPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHK 532

Query: 73  LFFEMMDQGVQPS 85
            F +M      P+
Sbjct: 533 AFRQMEKDDCSPA 545


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  244 bits (622), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 134/364 (36%), Positives = 206/364 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY T+I  LC+ G +D A   F QM  + + PD   Y+ LI G C      +AK 
Sbjct: 426 KPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKE 485

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  E+M+ G+   +V F+ I++ LCK G++ +A  + DL V   + P A  YS LMDG+C
Sbjct: 486 LISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYC 545

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK+ +A  +F +M S G + +DV Y  L+NGYCK   ++E LSL+REM+ KGIKP+ +
Sbjct: 546 LVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTI 605

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN +  GLFE  +   A   F EM    +A +  TYN  + GL KN    EA+ LF+ L
Sbjct: 606 LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKEL 665

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  +++I   N +I G+ ++ R+E A +LF S+ R  LV  VVTY+IMI  L  +G +
Sbjct: 666 RAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLV 725

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A D+F  M+     P+  +   ++   ++ N+  +    L K+ E+    +     ++
Sbjct: 726 EEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLL 785

Query: 373 VDLL 376
           VDL 
Sbjct: 786 VDLF 789



 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/406 (31%), Positives = 207/406 (50%), Gaps = 35/406 (8%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
            E G VC P+ V Y+T+IDG  KEG V+KA  LF +M    I PD VTY+S++H LC A 
Sbjct: 209 AEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKAR 268

Query: 66  -----------------------------------DWNEAKRLFFEMMDQGVQPSVVTFN 90
                                               W EA R+F EM    + P VVT +
Sbjct: 269 AMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLS 328

Query: 91  VIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
           ++M  LCK GK+ EA  + D M  +   PN F+Y+ +++G+   G +    +LF  M   
Sbjct: 329 MLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGD 388

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G   D  ++N+LI  Y     +++A+ ++ EM   G+KP VVTY T+   L  I +++ A
Sbjct: 389 GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 448

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           ++ F +M    VA D   Y+  I G C +G +++A EL   +      LDI  ++ +I+ 
Sbjct: 449 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 508

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LCK GR+  A  +F       L    V Y++++ G C  G+M+KA  +F  M    + PN
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 568

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +++ TL++G+ +I +  + + L  +M +K + P   + ++++D L
Sbjct: 569 DVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 614



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 184/402 (45%), Gaps = 38/402 (9%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           V  P + TY  ++D   +    + A A F Q+    +  +++  N L+ G C A   +EA
Sbjct: 106 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEA 165

Query: 71  KRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV--RPNAFTYSTL 127
             +      + G  P V ++++++  LC  GK  +A  LL +M +      P+   YST+
Sbjct: 166 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTV 225

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DGF   G +N+A +LF  M   G   D V+Y+ +++  CK + +++A +  R+MV+KG+
Sbjct: 226 IDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 285

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P   TYN L  G     Q + A+++F+EM+R  +  D  T +  +  LCK G I EA +
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 345

Query: 248 LFRTLGILK-----------------------------------CELDIQAYNCLIDGLC 272
           +F T+ +                                        DI  +N LI    
Sbjct: 346 VFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYA 405

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
             G L+ A+ +F  +    +  DVVTY  +I  LC  G+MD A + F  M +  VAP+  
Sbjct: 406 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 465

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +  LI GF       K  EL+ ++    +  D    S +++
Sbjct: 466 AYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 507



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 185/395 (46%), Gaps = 35/395 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT + ++  LCK G + +A+ +F  M  +  NP+V +Y  +++G        +   L
Sbjct: 322 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDL 381

Query: 74  FFEMMDQGVQPSVVTFNV-----------------------------------IMDELCK 98
           F  M+  G+ P + TFNV                                   ++  LC+
Sbjct: 382 FDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 441

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
            GKMD+A    + M+ + V P+ + Y  L+ GFC  G + +A+EL   + + G   D V 
Sbjct: 442 IGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 501

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           ++ +IN  CK   V +A +++   V+ G+ PT V Y+ L  G   + ++E AL++F+ M 
Sbjct: 502 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMV 561

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  +   Y T ++G CK G I E + LFR +     +     YN +IDGL ++GR  
Sbjct: 562 SAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 621

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A   F  +    +  +  TYNI++ GL  +   D+A  LF ++    V  N+I   T+I
Sbjct: 622 PAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMI 681

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            G  +  +  +  +L   +    ++P     S+++
Sbjct: 682 AGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMI 716



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 126/266 (47%), Gaps = 35/266 (13%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V   P  V Y+ ++DG C  G ++KA  +F  M    I P+ V Y +L++G C     
Sbjct: 526 VNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRI 585

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +E   LF EM+ +G++PS + +N+I+D L       EA R +   V+             
Sbjct: 586 DEGLSLFREMLQKGIKPSTILYNIIIDGLF------EAGRTVPAKVK------------- 626

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
                           F  M   G   +  +YNI++ G  KN+  +EA+ L++E+ +  +
Sbjct: 627 ----------------FHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNV 670

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           K  ++T NT+  G+F+  +VE A  LF  + R  +     TY+  I  L K G + EA +
Sbjct: 671 KINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAED 730

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCK 273
           +F ++    CE D +  N ++  L K
Sbjct: 731 MFSSMQNAGCEPDSRLLNHVVRELLK 756



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 114/237 (48%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V Y T+++G CK G +D+  +LF +M  + I P  + YN +I GL  A     AK 
Sbjct: 566 EPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 625

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM + G+  +  T+N+++  L KN   DEA  L   +   +V+ N  T +T++ G  
Sbjct: 626 KFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMF 685

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            T ++  A++LF S+   G     V+Y+I+I    K   VEEA  ++  M + G +P   
Sbjct: 686 QTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSR 745

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             N +   L + +++  A     ++   + + +  T    +D     G   E +   
Sbjct: 746 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 126/292 (43%), Gaps = 44/292 (15%)

Query: 115 RDVRPNAFTYSTLMD-----------------------------------GFCLTGKINR 139
           R + P + TY+ LMD                                   GFC   + + 
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDE 164

Query: 140 AEE-LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI--KPTVVTYNT 196
           A + L      +GC  D  SY+IL+   C   +  +A  L R M   G    P VV Y+T
Sbjct: 165 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYST 224

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---G 253
           +  G F+   V  A  LF+EM +  +  D  TY++ +  LCK   + +A    R +   G
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +L    +   YN LI G   +G+ + A+ +F+ + R  ++ DVVT ++++  LC  G++ 
Sbjct: 285 VLP---NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 341

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A D+F  M      PNV  +  +++G+        + +L   M    + PD
Sbjct: 342 EARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 393


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  244 bits (622), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 130/366 (35%), Positives = 204/366 (55%), Gaps = 3/366 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           P+ VTY+T+I+G CK+G +D+A  +  +M   + I PDVVTY S++ GLC     + A  
Sbjct: 75  PDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACE 134

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDVRPNAFTYSTLMDGF 131
           +  EM  +GV+P   TF+ ++   C   K+DEA +L  +++     +P+  TY+ L+DGF
Sbjct: 135 MVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGF 194

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +G + +A ++ G ME   C  + V+Y+ L++G CK  ++++AL L+R M SKG  P V
Sbjct: 195 CKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNV 254

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY TL  GL   H+V+ A  L +EM       DT +YN  +DG C+ G I EA +LF+ 
Sbjct: 255 VTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKE 314

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV-ADVVTYNIMIHGLCNDG 310
           +    C  D   Y CL+ G C + RLE A  L  ++     +  DVVTY+I++ G     
Sbjct: 315 MATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAK 374

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +  +A +   +M    VAPN + + +LI G  +  +    +E+L  M  K+V P     +
Sbjct: 375 RFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFN 434

Query: 371 MVVDLL 376
            V+  L
Sbjct: 435 SVIGAL 440



 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 219/404 (54%), Gaps = 40/404 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P  VT+  IIDG CK   + +A A F +M+ E + P+  TYN +++GLC A   ++A 
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKAY 61

Query: 72  RLFFEMMD-QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-VRPNAFTYSTLMD 129
            +  EM D + V P +VT++ +++  CK G+MD A  +L  MV RD + P+  TY++++D
Sbjct: 62  EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE-MVSKGIK 188
           G C  GK++RA E+   M+  G + D  +++ LI G+C  ++V+EAL LY+E + S   K
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTY  L  G  +   +E A+K+   M+      +  TY++ + GLCK G + +A++L
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241

Query: 249 FRTL-----------------GILK------------------CELDIQAYNCLIDGLCK 273
           FR +                 G+                    C  D  +YN L+DG C+
Sbjct: 242 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCR 301

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA-VAPNVI 332
            GR+E A +LF+ +  +  + D +TY  ++ G CN  ++++A  L  +M+  A + P+V+
Sbjct: 302 LGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 361

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +  ++ G+ R  +  +  E + +M  + V P+A   S ++D L
Sbjct: 362 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 405



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 122/372 (32%), Positives = 202/372 (54%), Gaps = 8/372 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY  +IDG CK G ++KA  +   M+G    P+VVTY+SL+HGLC A D ++A  
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 240

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M  +G  P+VVT+  ++  LC   K+D A  L+D M      P+  +Y+ L+DG+C
Sbjct: 241 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYC 300

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM-VSKGIKPTV 191
             G+I  A++LF  M +  C  D ++Y  L+ G+C    +EEA  L   M  + GI P V
Sbjct: 301 RLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 360

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+ +  G     +   A +  +EM   +VA +  TY++ IDGLCK G +  A+E+ + 
Sbjct: 361 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKN 420

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   + E  +  +N +I  LC+ G ++ A +L  ++    L   +VTY  ++ G    G+
Sbjct: 421 MVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR 480

Query: 312 MDKAHDLFLDME----ENAVAPNVI---IFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           M+ A++LF  M     +++ A N++    F  LI G  +  +  K + ++ +++ ++  P
Sbjct: 481 MEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEP 540

Query: 365 DASIVSMVVDLL 376
                  +VD L
Sbjct: 541 AEEDCLAIVDGL 552



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 194/359 (54%), Gaps = 8/359 (2%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C PN VTY++++ GLCK G +D+A  LF +M  +   P+VVTY +LIHGLC A+  +
Sbjct: 212 GRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVD 271

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A+ L  EM      P  V++N ++D  C+ G+++EA +L   M  +   P+  TY+ L+
Sbjct: 272 AARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLV 331

Query: 129 DGFCLTGKINRAEELFGSMES-MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
            GFC   ++  A  L  +M++  G   D V+Y+I++ GY + K   EA    +EM+++ +
Sbjct: 332 RGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNV 391

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P  VTY++L  GL +  +V+HA+++ + M    V     T+N+ I  LC+ G + EA +
Sbjct: 392 APNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWK 451

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV-------TYN 300
           L   +     E  +  Y  L++G  ++GR+EIA ELF  + ++   +           ++
Sbjct: 452 LLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFS 511

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
            +I GLC   ++DKA  +  ++      P     + ++ G +R  +  +  +L++ + +
Sbjct: 512 ALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISK 570



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 144/297 (48%), Gaps = 39/297 (13%)

Query: 116 DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
           + +P   T++ ++DGFC   ++ +A   F  M       ++ +YN+++NG CK +   +A
Sbjct: 2   ECQPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKA 60

Query: 176 LSLYREMV-SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFI 233
             + +EM   K + P +VTY+T+  G  +  +++ A ++  EM  RD +A D  TY + +
Sbjct: 61  YEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVV 120

Query: 234 DGLCKNGYIVEAVELFRTLGILKCE----------------------------------- 258
           DGLC++G +  A E+ R + +   E                                   
Sbjct: 121 DGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSW 180

Query: 259 -LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D+  Y  LIDG CKSG LE A+++   +  R  V +VVTY+ ++HGLC  G +D+A D
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 240

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           LF  M      PNV+ + TLIHG    +K      L+ +M      PD    + ++D
Sbjct: 241 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLD 297



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 42/180 (23%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY+++IDGLCK G VD A  +   M  + + P V T+NS+I  LC   D +EA +L
Sbjct: 393 PNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKL 452

Query: 74  FFEMMDQGVQPSVVT------------------------------------------FNV 91
              M   G++P +VT                                          F+ 
Sbjct: 453 LVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSA 512

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           ++  LCK  ++D+A  +++ +  R+  P       ++DG    G+   A +L  S+  +G
Sbjct: 513 LIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 572


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  243 bits (621), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 129/345 (37%), Positives = 206/345 (59%), Gaps = 3/345 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V+Y  +++GLCK G   + +A    ++   +N DVV Y+++I  LC      +A R
Sbjct: 112 KLDQVSYAILMNGLCKMG---ETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYR 168

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L+ EM+ +G+ P+V TF++++D LCK+ K  +A  LL +M+++ V+PN  TY  +MDG+C
Sbjct: 169 LYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYC 228

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L  ++N+A  +F  M   G + +   YNI+ING CK K V+EA++L++EM  K I P VV
Sbjct: 229 LVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVV 288

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L  GL ++ ++  +L+L +EM+      D  TYN+ +  LCKN ++ +A+ L + +
Sbjct: 289 TYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEI 348

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + ++  Y  LIDGLCK GRLE A  +F+ +        V TYN+MI+GLC  G  
Sbjct: 349 KDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLF 408

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           D+A  L   ME+NA  P+ + + T+I+      +  K  +LL  M
Sbjct: 409 DEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAM 453



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 189/354 (53%), Gaps = 3/354 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN++T+ T+I G+C  G   +A      +       D V+Y  L++GLC   +   A +
Sbjct: 77  EPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQ 136

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   +    V   VV ++ I+D LCK   + +A RL   M+ + + PN +T+S L+D  C
Sbjct: 137 M---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALC 193

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K  +A  L   M   G K + V+Y  +++GYC   +V +AL+++  MV +G++P V 
Sbjct: 194 KDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVW 253

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN +  GL +  +V+ A+ LF+EM    +  D  TYN  IDGLCK G I  ++EL   +
Sbjct: 254 CYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEM 313

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +   +DI  YN L+  LCK+  L+ A+ L + +  + +  +V TY  +I GLC DG++
Sbjct: 314 RSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRL 373

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           + A+ +F ++        V  +  +I+G  +     + + LL +M++   +PDA
Sbjct: 374 EDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDA 427



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 185/361 (51%), Gaps = 3/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  + +N I+  L K      A +LF Q++   I P +VT   L++  CH         +
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G +P+ +TF  ++  +C NG+  EA    D +V    + +  +Y+ LM+G C 
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A ++   +       D V Y+ +I+  CK K V +A  LY EM++KGI P V T
Sbjct: 128 MGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYT 184

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           ++ L   L +  + + A+ L   M +  V  +  TY   +DG C    + +A+ +F  + 
Sbjct: 185 FSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMV 244

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E ++  YN +I+GLCK  R++ A+ LF+ +  + +  DVVTYNI+I GLC  G++ 
Sbjct: 245 QEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKIS 304

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            + +L  +M       ++I + +L+H   + +   + I L+ ++K++ + P+    + ++
Sbjct: 305 TSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLI 364

Query: 374 D 374
           D
Sbjct: 365 D 365



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 150/298 (50%), Gaps = 3/298 (1%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+     P ++ FN I+  L K      A  L   +    ++P+  T + LM+ +C TG 
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           I     +   +  MG + + +++  LI G C N +  EAL  +  +V+ G K   V+Y  
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  GL ++ +   A+++   +++  V AD   Y+T ID LCK  ++ +A  L+  +    
Sbjct: 121 LMNGLCKMGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              ++  ++ L+D LCK  + + A+ L   + ++ +  +VVTY  ++ G C   Q++KA 
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKAL 237

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           ++F  M +  V PNV  +  +I+G  +  +  + + L  +M  KK+ PD    ++++D
Sbjct: 238 NIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILID 295



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 96/174 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYN +IDGLCK G +  +  L  +M+      D++TYNSL+H LC  +  ++A  L
Sbjct: 285 PDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITL 344

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             E+ DQG+QP+V T+  ++D LCK+G++++A  +   ++        +TY+ +++G C 
Sbjct: 345 VKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCK 404

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
            G  + A  L   ME   C  D VSY  +I    +  E  +   L   M+ +G+
Sbjct: 405 KGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGL 458



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 59/103 (57%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TY T+IDGLCK+G ++ A  +F ++  E  +  V TYN +I+GLC    ++EA  
Sbjct: 354 QPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALA 413

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           L   M D    P  V++  I+  L + G+  + ++LL  M+ R
Sbjct: 414 LLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVR 456



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 83/188 (44%), Gaps = 3/188 (1%)

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P ++ +N +   L +I+    A+ LF +++ + +     T    ++  C  G I     +
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +  +  E +   +  LI G+C +G+   AL     +       D V+Y I+++GLC 
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G+   A  +   + +  V  +V+++ T+I    +    +    L  +M  K + P+   
Sbjct: 128 MGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYT 184

Query: 369 VSMVVDLL 376
            S++VD L
Sbjct: 185 FSILVDAL 192


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  243 bits (621), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 133/401 (33%), Positives = 208/401 (51%), Gaps = 36/401 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T+  ++   CK+G +     LF QM    I+PD + YN LI G       +EA 
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL+ EM+  G++PS+ T+N +++  CK  KM EA  L   M ++   P+  TYST++ G 
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 132 CLTGKINRA-EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           C TGK+  A E LF  M   GC  + V+YN LING CK++ +E A  L  EM SKG  P 
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            +TYNT+  GL  + +V  A + F+ M     + D   YN  +D L K G   EA++LF+
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243

Query: 251 T-----------------LGILK------------------CELDIQAYNCLIDGLCKSG 275
                             LG+ +                  C  +   Y+ ++ G C++ 
Sbjct: 244 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAK 303

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           +++ A ++   + +   V DVVTYNI++ GLC    +DKAH+LF  M +N  AP+++ + 
Sbjct: 304 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYS 363

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +++G  + NK      L  +M E+K++PD    ++++D L
Sbjct: 364 VVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL 404



 Score =  237 bits (604), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 130/394 (32%), Positives = 214/394 (54%), Gaps = 36/394 (9%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V  +P+  TYN++++  CKE  + +A  LF  M  +   PDVVTY+++I GLC     
Sbjct: 70  VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKV 129

Query: 68  NEA-KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            EA + LF +M+++G   + V +N +++ LCK+  ++ A +LL+ M  +   P+  TY+T
Sbjct: 130 TEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNT 189

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ G C  GK++ A++ F SM S G   D V+YN L++   K  + +EA+ L++++++KG
Sbjct: 190 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKG 249

Query: 187 IKPTVVTYNTLFLGLFE-----------------------------------IHQVEHAL 211
             P  VTYN++ LGL                                       +V+ A 
Sbjct: 250 YMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAH 309

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           K+ EEM +     D  TYN  +DGLCK   + +A ELF T+    C  DI +Y+ +++GL
Sbjct: 310 KVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGL 369

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           CK+ ++  A  LF  +  R LV DVVT+NI++ GLC  G++D+A DL   M  +  AP+ 
Sbjct: 370 CKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDY 429

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + + TL++G  +  +  +   L   MKEK  + D
Sbjct: 430 VAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 137/252 (54%), Gaps = 1/252 (0%)

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
           R+  PN +T+  ++  FC  GK+    +LF  M   G   D + YNILI+GY K   V+E
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           A  LY EMVS G++P++ TYN+L     +  +++ A++LF+ M       D  TY+T I 
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 235 GLCKNGYIVEAVE-LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
           GLCK G + EA+E LF  +    C  +  AYN LI+GLCK   +E A +L   +  +  V
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            D +TYN ++ GLC  G++ +A   F  M     +P+V+ +  L+    +  K  + ++L
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 354 LHKMKEKKVMPD 365
              +  K  MPD
Sbjct: 242 FKDVIAKGYMPD 253



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 63/111 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V+Y+ +++GLCK   V  A+ LF +M    + PDVVT+N L+ GLC A   +EAK
Sbjct: 355 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 414

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
            L  +M   G  P  V +N +M+ L K G+  +A RL   M ++    + F
Sbjct: 415 DLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 60/121 (49%)

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
           +C  +   +  ++   CK G+L    +LF  +    +  D + YNI+I G    G++D+A
Sbjct: 3   ECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA 62

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
           + L+ +M    + P++  + +L++ F +  K  + +EL   M EK   PD    S ++  
Sbjct: 63  NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISG 122

Query: 376 L 376
           L
Sbjct: 123 L 123


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  243 bits (621), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 128/318 (40%), Positives = 188/318 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V YNTIIDGLCK   VD A  L  +M+ + I PD VTYNSLI GLC++  W++A R
Sbjct: 183 EPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATR 242

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M  + + P V TFN ++D   K G++ EA  L + M++R + P+  TYS L+ G C
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLC 302

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  +++ AE++FG M S GC  D V+Y+ILINGYCK+K+VE  + L+ EM  +G+    V
Sbjct: 303 MYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L  G     ++  A ++F+ M    V  +  TYN  + GLC NG I +A+ +   +
Sbjct: 363 TYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADM 422

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + DI  YN +I G+CK+G +  A +L+ SL  + L  D+ TY  M+ GL   G  
Sbjct: 423 QKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLR 482

Query: 313 DKAHDLFLDMEENAVAPN 330
            +A  LF  M+E+ + PN
Sbjct: 483 GEADALFRKMKEDGILPN 500



 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 201/357 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT+ ++++G C+   +  A  +F +M      P+VV YN++I GLC +   + A  
Sbjct: 148 EPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALD 207

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M   G++P  VT+N ++  LC +G+ D+A+R++  M +R++ P+ FT++ L+D   
Sbjct: 208 LLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACV 267

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+I+ AEEL+  M       D V+Y++LI G C    ++EA  ++  MVSKG  P VV
Sbjct: 268 KEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVV 327

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L  G  +  +VEH +KLF EM +  V  +T TY   I G C+ G +  A E+F+ +
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWM 387

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +I  YN L+ GLC +G++E AL +   + +  + AD+VTYNI+I G+C  G++
Sbjct: 388 VFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEV 447

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
             A DL+  +    + P++  +  ++ G  +     +   L  KMKE  ++P+   V
Sbjct: 448 ADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPNECYV 504



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 188/357 (52%), Gaps = 2/357 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   ++ ++  + K    D    L+ QM+   I  ++ T N L++  C  +  + A   
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +MM  G +P +VTF  +++  C+  ++ +A  + D MV+    PN   Y+T++DG C 
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           + +++ A +L   ME  G + D V+YN LI+G C +   ++A  +   M  + I P V T
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L     +  ++  A +L+EEM R  +  D  TY+  I GLC    + EA ++F  + 
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMV 318

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D+  Y+ LI+G CKS ++E  ++LF  + +R +V + VTY ++I G C  G+++
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLN 378

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            A ++F  M    V PN+I +  L+HG     K  K + +L  M++  +  DA IV+
Sbjct: 379 VAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGM--DADIVT 433



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 169/334 (50%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D +  LF  M      P +  ++ L+  +     ++    L+ +M   G+  ++ T N+
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C+  ++  A   L  M++    P+  T+ +L++GFC   +I  A  +F  M  MG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + + V YN +I+G CK+K+V+ AL L   M   GI+P  VTYN+L  GL    + + A 
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           ++   M + ++  D  T+N  ID   K G I EA EL+  +     + DI  Y+ LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C   RL+ A ++F  +  +    DVVTY+I+I+G C   +++    LF +M +  V  N 
Sbjct: 302 CMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + +  LI G+ R  K +   E+   M    V P+
Sbjct: 362 VTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPN 395



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 161/301 (53%)

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LFF M+     PS+  F+ ++  + K  K D    L + M    +  N  T + L++ FC
Sbjct: 68  LFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +++ A    G M  +G + D V++  L+NG+C+   + +AL ++  MV  G +P VV
Sbjct: 128 RCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVV 187

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YNT+  GL +  QV++AL L   M+ D +  D  TYN+ I GLC +G   +A  +   +
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCM 247

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   D+  +N LID   K GR+  A EL+  + RR L  D+VTY+++I+GLC   ++
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRL 307

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A  +F  M      P+V+ +  LI+G+ +  K    ++L  +M ++ V+ +    +++
Sbjct: 308 DEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVL 367

Query: 373 V 373
           +
Sbjct: 368 I 368



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 144/284 (50%), Gaps = 4/284 (1%)

Query: 95  ELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
           E+ +NG    K+D++  L   MVQ    P+   +S L+       K +    L+  M+ +
Sbjct: 51  EMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G  H+  + NIL+N +C+  ++  ALS   +M+  G +P +VT+ +L  G     ++  A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDA 170

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           L +F+ M       +   YNT IDGLCK+  +  A++L   + +     D   YN LI G
Sbjct: 171 LYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISG 230

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LC SGR + A  +   + +R +  DV T+N +I     +G++ +A +L+ +M   ++ P+
Sbjct: 231 LCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPD 290

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           ++ +  LI+G    ++  +  ++   M  K   PD    S++++
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILIN 334



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 98/178 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY+ +I+G CK   V+    LF +M    +  + VTY  LI G C A   N A+
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAE 381

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M+  GV P+++T+NV++  LC NGK+++A  +L  M +  +  +  TY+ ++ G 
Sbjct: 382 EIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGM 441

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           C  G++  A +L+ S+   G   D  +Y  ++ G  K     EA +L+R+M   GI P
Sbjct: 442 CKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILP 499



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 20/232 (8%)

Query: 163 INGYCKNKEVEEALSLYREMVSKGIK--------------------PTVVTYNTLFLGLF 202
           I G C ++      S YREM+  GI+                    P++  ++ L   + 
Sbjct: 33  ICGLCFSRRAYSGGSDYREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ 262
           ++ + +  + L+E+MQ   +  +  T N  ++  C+   +  A+     +  L  E DI 
Sbjct: 93  KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIV 152

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
            +  L++G C+  R+  AL +F  +       +VV YN +I GLC   Q+D A DL   M
Sbjct: 153 TFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           E + + P+ + + +LI G     +      ++  M ++++ PD    + ++D
Sbjct: 213 EVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALID 264


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 129/361 (35%), Positives = 197/361 (54%), Gaps = 9/361 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P++ +Y  +IDGL K G ++ A+ LF ++    + P  V Y SLIHGLC AN +++A+ L
Sbjct: 321 PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 380

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M  +G  PS VT+NV++D  CK G ++EA  L+  M++    P+  TY+T+MDG C 
Sbjct: 381 FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 440

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE---------EALSLYREMVS 184
           + ++  A  LF  ME +GC  +  S+N +I G C+  +++         EA  L + M  
Sbjct: 441 SSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTD 500

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
            G  P VVTY+TL  GL  I +V+ A  L E+M +        T NT I GLCK G I E
Sbjct: 501 DGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKE 560

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A E+   +       D+  YN L+ G C++G+ E A EL   +  R L  +VVTY  ++ 
Sbjct: 561 AREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVS 620

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           GLC   ++ +A  +F  M+ +  APN+  +  LI GF    +    ++L  +M    + P
Sbjct: 621 GLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISP 680

Query: 365 D 365
           D
Sbjct: 681 D 681



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/380 (33%), Positives = 203/380 (53%), Gaps = 15/380 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALF------LQMKGENINPDVVTYNSLIHGLCHAN 65
           C P+ V+Y T++DGLCK G V++A  LF            +  P +  YN +I GLC  +
Sbjct: 243 CAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQND 302

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             +EA ++F +M ++ V P   ++ +++D L K GK+++A  L   ++   V P+   Y+
Sbjct: 303 RIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYT 362

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           +L+ G C+    + A ELF  M   GC    V+YN++I+  CK   +EEA  L ++M+  
Sbjct: 363 SLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIED 422

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G  P VVTYNT+  GL +  +VE AL LF EM+R     +  ++NT I GLC+   I +A
Sbjct: 423 GHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA 482

Query: 246 V------ELFRTLGILKCE---LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
                  E FR L  +  +    D+  Y+ LI GLC   R++ A  L   + +R     V
Sbjct: 483 CQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 542

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           VT N +IHGLC  G++ +A ++   M  +  +P+V+ + TL+HG  R  +  +  ELL  
Sbjct: 543 VTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSD 602

Query: 357 MKEKKVMPDASIVSMVVDLL 376
           M  + + P+    + +V  L
Sbjct: 603 MVARGLAPNVVTYTALVSGL 622



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/323 (34%), Positives = 165/323 (51%), Gaps = 9/323 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYN +ID  CK G +++A  L  +M  +   PDVVTYN+++ GLC ++   EA 
Sbjct: 389 CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEAL 448

Query: 72  RLFFEMMDQGVQPSVVTFNVIM---------DELCKNGKMDEASRLLDLMVQRDVRPNAF 122
            LF EM   G  P+  + N I+         D+ C+ GK+DEA RLL  M      P+  
Sbjct: 449 LLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVV 508

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TYSTL+ G C   +++ A  L   M    CK   V+ N LI+G CK   ++EA  +   M
Sbjct: 509 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAM 568

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
           VS G  P VVTYNTL  G     Q E A +L  +M    +A +  TY   + GLCK   +
Sbjct: 569 VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRL 628

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            EA  +F  +    C  ++  Y  LI G C +G+++  L+LF  +    +  D V Y  +
Sbjct: 629 PEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 688

Query: 303 IHGLCNDGQMDKAHDLFLDMEEN 325
              LC  G+  +A ++  +  E+
Sbjct: 689 AAELCKSGRSARALEILREGRES 711



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/316 (35%), Positives = 167/316 (52%), Gaps = 11/316 (3%)

Query: 12  CKPNTVTYNTIIDGLCKE---------GFVDKAKALFLQMKGENINPDVVTYNSLIHGLC 62
           C PN  ++NTII GLC++         G +D+A  L  +M  +   PDVVTY++LI GLC
Sbjct: 459 CTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLC 518

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
                ++A+ L  +M+ +  +P+VVT N ++  LCK G++ EA  +LD MV     P+  
Sbjct: 519 SIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 578

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TY+TL+ G C  G+  RA EL   M + G   + V+Y  L++G CK   + EA  ++ +M
Sbjct: 579 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 638

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
            S G  P + TY  L LG     QV+  LKLF EM    ++ D   Y T    LCK+G  
Sbjct: 639 KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRS 698

Query: 243 VEAVELFRT-LGILKCE-LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
             A+E+ R     L+ E    + Y   +DGL ++G++E+AL   R + R   +       
Sbjct: 699 ARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCA 758

Query: 301 IMIHGLCNDGQMDKAH 316
            ++ GLC  GQ  +A 
Sbjct: 759 SLVAGLCKSGQGGEAR 774



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 182/399 (45%), Gaps = 43/399 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  + + ++I G C  G   +A  +F  M+ E  +P    YN LI  L    +    K++
Sbjct: 8   PAPLLFTSVIQGWCNVGRTFEAVKIFSLME-ECHSPYPDVYNVLIDSLSKRQETEAVKKM 66

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+D+G  P   TF  I+  LCK GKMDEA  ++D M  R + P   T S L    CL
Sbjct: 67  VQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCL 126

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI------ 187
            G + RA +L   M       +  +YNI++   CK   V++AL L R M  K I      
Sbjct: 127 RGSMERAFQLLEIMPVA----NSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGS 182

Query: 188 --------------------------KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
                                     +P +VT N L  G     QV+ A +L   M  ++
Sbjct: 183 LDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEE 242

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELF--RTL----GILKCELDIQAYNCLIDGLCKSG 275
            A D  +Y T +DGLCK G + EAV LF  R L            ++ YN +I GLC++ 
Sbjct: 243 CAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQND 302

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           R++ A+++F  +  R +  D  +Y I+I GL   G+++ A +LF  +  + V P+ + + 
Sbjct: 303 RIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYT 362

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +LIHG    N      EL   M  +   P     ++++D
Sbjct: 363 SLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMID 401



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 186/371 (50%), Gaps = 13/371 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P++ T+ TI+ GLCK G +D+A+ +  +M+   I P   T + L H LC       A 
Sbjct: 75  CFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERA- 133

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
              F++++     +   +N+++  LCK  ++D+A  L   M ++ +   A +  +++ G 
Sbjct: 134 ---FQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGL 190

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
             +G+I+ A +++       C    V+ N+L+ G+C   +V++A  L R M  +   P  
Sbjct: 191 MDSGRIDEALQVYRENRREPCL---VTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDE 247

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST------YNTFIDGLCKNGYIVEA 245
           V+Y T+  GL +  +VE A++LF + +    ++ +S+      YN  I GLC+N  I EA
Sbjct: 248 VSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEA 307

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           V++F  +       D  +Y  LIDGL K+G+L  A  LF+ L    +    V Y  +IHG
Sbjct: 308 VQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHG 367

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC     D A +LF DM      P+ + +  +I    +     +  +L+ KM E   +PD
Sbjct: 368 LCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPD 427

Query: 366 ASIVSMVVDLL 376
               + V+D L
Sbjct: 428 VVTYNTVMDGL 438



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 122/273 (44%), Gaps = 42/273 (15%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP  VT NT+I GLCK G + +A+ +   M     +PDVVTYN+L+HG C A     A+
Sbjct: 538 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAR 597

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +M+ +G+ P+VVT+  ++  LCK  ++ EA  +   M      PN FTY+ L+ GF
Sbjct: 598 ELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGF 657

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK--------------------- 170
           C  G+++   +LFG M   G   D V Y  L    CK+                      
Sbjct: 658 CSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAW 717

Query: 171 ----------------EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
                           ++E AL   R+MV  G  P      +L  GL +  Q   A  + 
Sbjct: 718 GDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVL 777

Query: 215 EEMQRDDVAADTSTYN---TFIDGLCKNGYIVE 244
           EE+   D+A           F++ +   GY +E
Sbjct: 778 EEIM--DLAYGGKARGKAAKFVEEMVGKGYEIE 808



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 68/260 (26%)

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ-------------------RDDV 222
           M  +GI P  + + ++  G   + +   A+K+F  M+                   R + 
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQET 60

Query: 223 AA---------------DTSTYNTFIDGLCKNGYIVEA------------VELFRTLGIL 255
            A               D+ T+ T + GLCK G + EA               F T   L
Sbjct: 61  EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120

Query: 256 KCELDIQ-------------------AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
             EL ++                   AYN ++  LCK+ R++ ALEL R++  + +    
Sbjct: 121 AHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAA 180

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
            + + ++ GL + G++D+A  ++    EN   P ++    L+ GF    +  K  ELL  
Sbjct: 181 GSLDSVLVGLMDSGRIDEALQVY---RENRREPCLVTLNVLLEGFCSRGQVDKARELLRA 237

Query: 357 MKEKKVMPDASIVSMVVDLL 376
           M +++  PD      V+D L
Sbjct: 238 MPDEECAPDEVSYCTVLDGL 257


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 132/365 (36%), Positives = 206/365 (56%), Gaps = 1/365 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTY+T+I  LC+ G +D A   F QM  + + P + TY+ LI G C   D  +AK 
Sbjct: 423 EPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKD 482

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +MM++G++P +  FN I++ LCK G++ +A  + D  +   + PN   Y+TLMDG+C
Sbjct: 483 LVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYC 542

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK+  A  +F  M S G + + V Y  L+NGYCK   ++E LSL+RE++ KGIKP+  
Sbjct: 543 LVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTT 602

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN +  GLF+  +   A   F EM    +A D  TY+  + GL KN    EA+ LF+ L
Sbjct: 603 LYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKEL 662

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  ++DI   N +I G+ +  R+E A +LF S+ R  LV  VVTY+IM+  L  +G +
Sbjct: 663 HAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLV 722

Query: 313 DKAHDLFLDMEENAV-APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           ++A D+F  ME      PN  +   ++   +   +  +    L K+ E+    D S  ++
Sbjct: 723 EEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTL 782

Query: 372 VVDLL 376
           ++DL 
Sbjct: 783 LIDLF 787



 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 200/361 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+  TYN +++ LCK   +DKA+A+  QM  + + PD  TYNSLI+G      W EA R
Sbjct: 248 SPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVR 307

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M  QG+ P VVT N +M  LCK+GK+ +A  + D M  +  + + F+Y  +++G+ 
Sbjct: 308 VSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYA 367

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +    ELF  M S G   D   +N+LI  Y K   ++ A  ++ EM  +G++P VV
Sbjct: 368 TKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVV 427

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+T+   L  I +++ A++ F +M    VA   STY+  I G C +G +++A +L   +
Sbjct: 428 TYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQM 487

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  DI  +N +I+ LCK GR+  A  +F       L  +V+ YN ++ G C  G+M
Sbjct: 488 MNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKM 547

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A  +F  M    + PNV+++ TL++G+ ++ +  + + L  ++  K + P  ++ +++
Sbjct: 548 ENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNII 607

Query: 373 V 373
           +
Sbjct: 608 L 608



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 186/362 (51%), Gaps = 4/362 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN++I G    G   +A  +  +M  + I PDVVT NSL+  LC      +A+ +
Sbjct: 284 PDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDV 343

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M  +G +  + ++ ++++     G + + + L +LM+   + P++  ++ L+  +  
Sbjct: 344 FDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAK 403

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++RA  +F  M   G + D V+Y+ +I   C+  ++++A+  + +M+ +G+ P++ T
Sbjct: 404 CGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSIST 463

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  G      +  A  L  +M    +  D   +N  I+ LCK G +++A  +F    
Sbjct: 464 YHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTI 523

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +    ++  YN L+DG C  G++E AL +F  +    +  +VV Y  +++G C  G++D
Sbjct: 524 SIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRID 583

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK--PSKVIELLHKMKEKKVMPDASIVSM 371
           +   LF ++    + P+  ++  ++HG  +  +  P+KV    H+M E  +  D    S+
Sbjct: 584 EGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKV--KFHEMTESGIAMDRYTYSI 641

Query: 372 VV 373
           V+
Sbjct: 642 VL 643



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 187/402 (46%), Gaps = 38/402 (9%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           V  P   TY  ++D   +        A F Q+    +  D +  ++L+ GLC A    EA
Sbjct: 103 VLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEA 162

Query: 71  KRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV--RPNAFTYSTL 127
             +    M   G  P V ++ +++  LC + K  +A  LL +M +      PNA  Y+T+
Sbjct: 163 LDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTV 222

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DGF   G +N+A +LF  M   G   D  +YN ++N  CK + +++A ++ R+MV KG+
Sbjct: 223 IDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGV 282

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P   TYN+L  G     Q + A+++ ++M    +  D  T N+ +  LCK+G I +A +
Sbjct: 283 LPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARD 342

Query: 248 LFRTLGILKCELDIQAY-----------------------------------NCLIDGLC 272
           +F ++ +   + DI +Y                                   N LI    
Sbjct: 343 VFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYA 402

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           K G L+ A  +F  +  + +  DVVTY+ +I  LC  G+MD A + F  M +  VAP++ 
Sbjct: 403 KCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSIS 462

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +  LI GF       K  +L+ +M  K + PD    + +++
Sbjct: 463 TYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIIN 504



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 181/360 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT N+++  LCK G +  A+ +F  M  +    D+ +Y  +++G        +   L
Sbjct: 319 PDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTEL 378

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+  G+ P    FNV++    K G +D A+ + + M ++ V P+  TYST++   C 
Sbjct: 379 FNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCR 438

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A E F  M   G      +Y+ LI G+C + ++ +A  L  +M++KG++P +  
Sbjct: 439 IGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGC 498

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N +   L ++ +V  A  +F+      +  +   YNT +DG C  G +  A+ +F  + 
Sbjct: 499 FNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMV 558

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + ++  Y  L++G CK GR++  L LFR +  + +      YNI++HGL   G+  
Sbjct: 559 SAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTV 618

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A   F +M E+ +A +   +  ++ G  + +   + I L  ++    V  D + +++++
Sbjct: 619 PAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMI 678



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 164/339 (48%), Gaps = 15/339 (4%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           ++P + TY  L+     A+        F +++  G+    +  + ++  LC+  +  EA 
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEA- 162

Query: 107 RLLDLMVQR----DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG--CKHDDVSYN 160
             LD+++ R       P+ F+Y  ++   C   K  +A+EL   M   G  C  + V+YN
Sbjct: 163 --LDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYN 220

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            +I+G+ K  +V +A  L+ EMV +GI P + TYN +   L +   ++ A  +  +M   
Sbjct: 221 TVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDK 280

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCKSGRL 277
            V  D  TYN+ I G    G   EAV + + +   GIL    D+   N L+  LCK G++
Sbjct: 281 GVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILP---DVVTLNSLMASLCKHGKI 337

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A ++F S+  +    D+ +Y IM++G    G +    +LF  M  + +AP+  IF  L
Sbjct: 338 KDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVL 397

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           I  + +     +   + ++M+E+ V PD    S V+  L
Sbjct: 398 IKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAAL 436



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 129/284 (45%), Gaps = 4/284 (1%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           I +   PN + YNT++DG C  G ++ A  +F  M    I P+VV Y +L++G C     
Sbjct: 523 ISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRI 582

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +E   LF E++ +G++PS   +N+I+  L + G+   A      M +  +  + +TYS +
Sbjct: 583 DEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIV 642

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G       + A  LF  + +M  K D  + NI+I G  + + VEEA  L+  +   G+
Sbjct: 643 LGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGL 702

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST-YNTFIDGLCKNGYIVEAV 246
            P+VVTY+ +   L +   VE A  +F  M+        S   N  +  L +   IV A 
Sbjct: 703 VPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAG 762

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
                +      LD      LID     G      E  R LP +
Sbjct: 763 TYLSKIDERSFSLDHSTTTLLIDLFSSKGTCR---EHIRFLPAK 803


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 127/335 (37%), Positives = 189/335 (56%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G V KPN V YN IID  CK+    KA+ L+L++    I+PD++TY SLI G C    W 
Sbjct: 217 GQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWG 276

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           E K+L  EM+++ + P+V TFNV++D  C+ GKM EA  + +LMV+R  +P+  T++TL+
Sbjct: 277 EVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLI 336

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G CL G +  A +LF ++   G   D  SY ILI GYCK K ++EA+SL+ EM  K + 
Sbjct: 337 SGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMV 396

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
             +V Y++L  GL +  ++ +A +LF  +  D    +  TYN  ID  CK   I   +EL
Sbjct: 397 LDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIEL 456

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F+ +        +  YN LI+G CKS R+  A+ L   +  + L  D +TYN +  GLC 
Sbjct: 457 FKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCK 516

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            G++  A +LF  M       +V  +  L+  F +
Sbjct: 517 SGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCK 551



 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 201/358 (56%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V Y T+I+GLCK G    A  L  +M+G+ + P++V YN +I   C      +A+ L+ +
Sbjct: 190 VCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLK 249

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           ++D G+ P ++T+  ++   C+ G+  E  +L+  MV +++ PN +T++ L+D FC  GK
Sbjct: 250 IVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGK 309

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +  A+ +F  M   G + D V++N LI+G+C +  V EA  L+  +  +GI P V +Y  
Sbjct: 310 MIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTI 369

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L +G  +  +++ A+ LF EM+  ++  D   Y++ IDGLCK+G I  A ELF T+    
Sbjct: 370 LIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDG 429

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              ++  YN LID  CK   +++ +ELF+ +  + L   V+TYNI+I+G C   ++ +A 
Sbjct: 430 PPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAM 489

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +L   M+   +AP+ I + +L  G  +  + S   EL   M       D +  ++++D
Sbjct: 490 NLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLD 547



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/354 (33%), Positives = 189/354 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +T  T++ GLC  G V KA      +  + +  D V Y +LI+GLC      +A +
Sbjct: 151 QPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQ 210

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  Q V+P++V +N+I+D  CK+    +A  L   +V   + P+  TY++L+ GFC
Sbjct: 211 LLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFC 270

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            TG+    ++L   M +     +  ++N+LI+ +C+  ++ EA  ++  MV +G +P +V
Sbjct: 271 RTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIV 330

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL  G      V  A KLF+ +    +  D  +Y   I G CK   I EAV LF  +
Sbjct: 331 TFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEM 390

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 LDI  Y+ LIDGLCKSGR+  A ELF ++       +V+TYNI+I   C    +
Sbjct: 391 RCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDI 450

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           D   +LF  M    + P V+ +  LI+G+ +  +  + + LL  M+ K + PD+
Sbjct: 451 DMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDS 504



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 181/361 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + +NTII  + K      A +L  QM  + + P + T +  I+  CH  +   A  +
Sbjct: 82  PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 141

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              ++ +G QP+ +T   +M  LC NG++ +A    D +  + +  +   Y TL++G C 
Sbjct: 142 LGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCK 201

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A +L   ME    K + V YN++I+ +CK++   +A  LY ++V  GI P ++T
Sbjct: 202 IGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILT 261

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +L  G     Q     +L  EM   ++  +  T+N  ID  C+ G ++EA  +F  + 
Sbjct: 262 YTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMV 321

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + DI  +N LI G C  G +  A +LF ++  R ++ DV +Y I+I G C   ++D
Sbjct: 322 KRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRID 381

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  LF +M    +  +++++ +LI G  +  + S   EL   +      P+    ++++
Sbjct: 382 EAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILI 441

Query: 374 D 374
           D
Sbjct: 442 D 442



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 173/345 (50%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D A  LF  +      P V+ +N++I  +        A  L  +M+ +GV PS+ T ++
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
            ++  C  G+M  A  +L ++++R  +PN  T +T+M G C+ G++ +A +   ++ + G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
              D+V Y  LING CK     +A  L +EM  + +KP +V YN +     +      A 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            L+ ++    +  D  TY + I G C+ G   E  +L   +       ++  +N LID  
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C+ G++  A  +F  + +R    D+VT+N +I G C  G + +A  LF  + E  + P+V
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 364

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +  LI G+ +  +  + + L ++M+ K ++ D  + S ++D L
Sbjct: 365 WSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGL 409



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 156/313 (49%)

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           L   N  ++A  LF  +++    PSV+ FN I+  + K      A  LL  MV + V P+
Sbjct: 59  LSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPS 118

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
            FT S  ++ +C  G++  A  + G +   G + ++++   ++ G C N EV++A+  + 
Sbjct: 119 IFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHD 178

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            + ++G+    V Y TL  GL +I +   A +L +EM+   V  +   YN  ID  CK+ 
Sbjct: 179 NVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDE 238

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
              +A +L+  +  +  + DI  Y  LI G C++G+     +L   +  + +  +V T+N
Sbjct: 239 LTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFN 298

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           ++I   C  G+M +A  +F  M +    P+++ F TLI G        +  +L   + E+
Sbjct: 299 VLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFER 358

Query: 361 KVMPDASIVSMVV 373
            ++PD    ++++
Sbjct: 359 GILPDVWSYTILI 371



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 98/158 (62%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + V Y+++IDGLCK G +  A  LF  +  +   P+V+TYN LI   C   D +    LF
Sbjct: 398 DIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELF 457

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M  +G+ P+V+T+N++++  CK+ ++ EA  LL +M  +++ P++ TY++L DG C +
Sbjct: 458 KLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKS 517

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
           G+I+ A ELF  M   G   D  +YN+L++ +CK ++V
Sbjct: 518 GRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/174 (21%), Positives = 78/174 (44%)

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
           L   + ++ A+ LF  +           +NT I  + K  +   A+ L + +        
Sbjct: 59  LSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPS 118

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           I   +  I+  C  G +  A  +   + +R    + +T   ++ GLC +G++ KA D   
Sbjct: 119 IFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHD 178

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           ++    +  + + + TLI+G  +I +     +LL +M+ + V P+  I +M++D
Sbjct: 179 NVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIID 232



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 30/53 (56%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           P+++TYN++ DGLCK G +  A  LF  M       DV TYN L+   C A D
Sbjct: 502 PDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQD 554


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 204/391 (52%), Gaps = 37/391 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  NTV YN +I+GLCK+  +++A  L  +M  +   PD +TYN+++ GLC     +EAK
Sbjct: 76  CSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAK 135

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM--VQRDVRPNAFTYSTLMD 129
           + F  M  +G  P VV +N ++D L K GK+ EA  L   M    R V P+  TY+TL+D
Sbjct: 136 QFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLID 195

Query: 130 GFCLTGK-----------------------------------INRAEELFGSMESMGCKH 154
           GFC   K                                   ++ AEE+F  M   GC  
Sbjct: 196 GFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAP 255

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           +  +Y+I+++G+C+   +   L LY EM  K   P V+  N +   L +  +V+ A K+ 
Sbjct: 256 NGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVL 315

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           EEM +     D  TYN  +DGLCK   + +A ELF T+    C  DI +Y+ +++GLCK+
Sbjct: 316 EEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKT 375

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            ++  A  LF  +  R LV DVVT+NI++ GLC  G++D+A DL   M E+ V P+ +  
Sbjct: 376 NKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTC 435

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            TL+HG  R  +  + + L   M EK  + D
Sbjct: 436 TTLMHGLCRDKRTDEAVRLFQYMVEKGTVAD 466



 Score =  240 bits (613), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 222/401 (55%), Gaps = 37/401 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTY+TII GLCK G V +A  +  +M  + +NPDV TY  ++  LC A   +EA  
Sbjct: 7   EPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADE 66

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF +M+++G   + V +N +++ LCK+  ++ A +LL+ M  +   P+  TY+T++ G C
Sbjct: 67  LFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLC 126

Query: 133 LTGKINRAEELFGSMESMGCKHDDV----------------------------------- 157
             GK++ A++ F SM S G   D V                                   
Sbjct: 127 RMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPD 186

Query: 158 --SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
             +YN LI+G+C+ ++ +EA+ L++++++KG  P  VTYN++ LGL     ++ A ++F+
Sbjct: 187 LITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFK 246

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
           +M     A + +TY+  + G C+ G +   +EL+  +   +   D+   N +ID LCK+ 
Sbjct: 247 KMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAK 306

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           +++ A ++   + +   V DVVTYNI++ GLC    +DKAH+LF  M +N  AP+++ + 
Sbjct: 307 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYS 366

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +++G  + NK      L  +M E+K++PD    ++++D L
Sbjct: 367 VVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL 407



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 109/302 (36%), Positives = 176/302 (58%), Gaps = 2/302 (0%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M ++G +P VVT++ I+  LCK GK+ EA  +++ M ++ V P+  TY+ ++D  C  GK
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           ++ A+ELF  M   GC  + V+YN LING CK++ +E A  L  EM SKG +P  +TYNT
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL- 255
           +  GL  + +V  A + F+ M     + D   YN  +D L K G + EA  LF+T+ +  
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 256 -KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
            K   D+  YN LIDG C+  + + A++LF+ +  +  + D VTYN ++ GL     MD+
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A ++F  M ++  APN   +  ++ G  R+   ++ +EL  +M EK+  PD  + + V+D
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 375 LL 376
           +L
Sbjct: 301 ML 302



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 204/389 (52%), Gaps = 37/389 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TYNT+IDG C+    D+A  LF  +  +   PD VTYNS++ GL   ++ +EA+ +
Sbjct: 185 PDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEM 244

Query: 74  FFEMMDQGVQPSVVTF-----------------------------------NVIMDELCK 98
           F +M+D G  P+  T+                                   N ++D LCK
Sbjct: 245 FKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCK 304

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
             K+D+A ++L+ M +    P+  TY+ L+DG C T  +++A ELF +M   GC  D VS
Sbjct: 305 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 364

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y++++NG CK  +V +A  L+  M+ + + P VVT+N L  GL +  +++ A  L + M 
Sbjct: 365 YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMS 424

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
             +V  D  T  T + GLC++    EAV LF+ +       D+  +N ++ GLC+ G+L 
Sbjct: 425 EHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLA 484

Query: 279 IALELFRSLPRR--VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
            AL  F+S+ +       DVVTY  +++ L   G++D+A D F  M  +  AP+ + + T
Sbjct: 485 QALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNT 544

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           L++G  +  +  +   L   MKEK  + D
Sbjct: 545 LMNGLRKQGRHIQADRLTQAMKEKGFLSD 573



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/367 (33%), Positives = 191/367 (52%), Gaps = 4/367 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALF--LQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           P+ V YN ++D L KEG V +A  LF  + M    + PD++TYN+LI G C     +EA 
Sbjct: 148 PDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAM 207

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +LF +++ +G  P  VT+N I+  L +   MDEA  +   MV     PN  TYS ++ G 
Sbjct: 208 KLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGH 267

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + R  EL+  M       D +  N +I+  CK K+V++A  +  EM   G  P V
Sbjct: 268 CRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDV 327

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN L  GL + + V+ A +LF  M  +  A D  +Y+  ++GLCK   + +A  LF  
Sbjct: 328 VTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDR 387

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   K   D+  +N L+DGLCK+G+L+ A +L   +    ++ D VT   ++HGLC D +
Sbjct: 388 MIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKR 447

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM--KEKKVMPDASIV 369
            D+A  LF  M E     +V+    ++ G  R  K ++ +     M   + +  PD    
Sbjct: 448 TDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTY 507

Query: 370 SMVVDLL 376
           + +V+ L
Sbjct: 508 TTLVNAL 514



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 168/317 (52%), Gaps = 2/317 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TY+ ++ G C+ G + +   L+ +M  +  +PDV+  N++I  LC A   ++A 
Sbjct: 253 CAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAH 312

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++  EM   G  P VVT+N+++D LCK   +D+A  L   MV     P+  +YS +++G 
Sbjct: 313 KVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGL 372

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C T K++ A  LF  M       D V++NIL++G CK  +++EA  L   M    + P  
Sbjct: 373 CKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDG 432

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT  TL  GL    + + A++LF+ M      AD   +N  + GLC+ G + +A+  F++
Sbjct: 433 VTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKS 492

Query: 252 LGILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           +     E   D+  Y  L++ L ++GR++ A++ F+ +       D V YN +++GL   
Sbjct: 493 MVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQ 552

Query: 310 GQMDKAHDLFLDMEENA 326
           G+  +A  L   M+E  
Sbjct: 553 GRHIQADRLTQAMKEKG 569



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 4/111 (3%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQM---KGENINPDVVTYNSLIHGLCHANDWNEAK 71
           + + +N ++ GLC+EG + +A   F  M    GE  +PDVVTY +L++ L  A   ++A 
Sbjct: 466 DVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGE-FSPDVVTYTTLVNALIEAGRVDQAV 524

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
             F +M   G  P  V +N +M+ L K G+  +A RL   M ++    + F
Sbjct: 525 DYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 575



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 4/81 (4%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M   +GE      P+ VTY T+++ L + G VD+A   F QM G    PD V YN+L++G
Sbjct: 493 MVKSDGEFS----PDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNG 548

Query: 61  LCHANDWNEAKRLFFEMMDQG 81
           L       +A RL   M ++G
Sbjct: 549 LRKQGRHIQADRLTQAMKEKG 569


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 126/329 (38%), Positives = 195/329 (59%), Gaps = 2/329 (0%)

Query: 6    GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
             E+G+  +PN V YNT+I+GLCK   ++ A  +F  M+ + I  D VTYN+LI GLC++ 
Sbjct: 712  AELGL--EPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSG 769

Query: 66   DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             W +A RL  +M+ + + P+V+ F  ++D   K G + EA  L   M++R V PN  TY+
Sbjct: 770  RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYN 829

Query: 126  TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            +L++GFC+ G++  A+ +F  M S GC  D V+YN LI G+CK+K VE+ + L+ EM  +
Sbjct: 830  SLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQ 889

Query: 186  GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            G+     TYNTL  G  +  ++  A K+F  M    V  D  TYN  +D LC NG I +A
Sbjct: 890  GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKA 949

Query: 246  VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            + +   L   + ++DI  YN +I G+C++ +++ A  LFRSL R+ +  D + Y  MI G
Sbjct: 950  LVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISG 1009

Query: 306  LCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            LC +G   +A  L   M+E+   P+  I+
Sbjct: 1010 LCRNGLRREADKLCTRMKEDGFMPSERIY 1038



 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 123/316 (38%), Positives = 185/316 (58%), Gaps = 1/316 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNEAK 71
           +PN V YNT+ID LCK G V+ A  L  +M K   +  D+VTYN+L+ GLC++ +W +A 
Sbjct: 167 EPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAA 226

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R+  +M  + + P V TF  ++D   K G +DEA  L   M+Q  + PN  TY++L++G 
Sbjct: 227 RILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C+ G++  A++ F  M S GC  + V+YN LING+CK++ VE+ + L++ M  +G+    
Sbjct: 287 CMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDT 346

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYNTL  G  ++ ++  A  +F  M    V  D  T+   + GLC NG I  A+  F  
Sbjct: 347 FTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFND 406

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +  L I AYN +I GLCK+ ++E A ELF  LP   +  D  TY IMI GLC +G 
Sbjct: 407 MRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 466

Query: 312 MDKAHDLFLDMEENAV 327
             +A +LF  M+E+ +
Sbjct: 467 RREADELFRRMKEDGI 482



 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 122/356 (34%), Positives = 195/356 (54%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            +P+ VT  ++++G C+     +A +L   M    + P+VV YN++I+GLC   D N A  
Sbjct: 682  QPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALE 741

Query: 73   LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            +F+ M  +G+    VT+N ++  LC +G+  +A+RLL  MV+R + PN   ++ L+D F 
Sbjct: 742  IFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 801

Query: 133  LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              G +  A+ L+  M       + ++YN LING+C    + +A  ++  MVSKG  P VV
Sbjct: 802  KEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVV 861

Query: 193  TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            TYNTL  G  +  +VE  +KLF EM    +  D  TYNT I G C+ G +  A ++F  +
Sbjct: 862  TYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 921

Query: 253  GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   DI  YN L+D LC +G++E AL +   L +  +  D++TYNI+I G+C + ++
Sbjct: 922  VDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKV 981

Query: 313  DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
             +A  LF  +    V  + I ++T+I G  R     +  +L  +MKE   MP   I
Sbjct: 982  KEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERI 1037



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 119/354 (33%), Positives = 186/354 (52%), Gaps = 1/354 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+ +++ G C    +  A +L   M      P+VV YN+LI  LC   D N A  L
Sbjct: 133 PSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALEL 192

Query: 74  FFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             EM  +G +   +VT+N ++  LC +G+  +A+R+L  M +R + P+ FT++ L+D F 
Sbjct: 193 LNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFV 252

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A+EL+  M       + V+YN LING C +  +  A   +  M SKG  P VV
Sbjct: 253 KQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVV 312

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  +  +VE  +KLF+ M R+ +  DT TYNT I G C+ G +  A ++F  +
Sbjct: 313 TYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWM 372

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  DI  +  L+ GLC +G +  A+  F  +        +V YNIMIHGLC   ++
Sbjct: 373 VSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKV 432

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           ++A +LF  +    V P+   +  +I G  +     +  EL  +MKE  ++  A
Sbjct: 433 EEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQA 486



 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 186/361 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +  ++  + K    D    LF +M+   I+ D+ ++  LIH  C  + ++ A  L
Sbjct: 613 PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALAL 672

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +MM  G QPS+VT   +++  C+  +  EA  L+D M +  + PN   Y+T+++G C 
Sbjct: 673 LGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCK 732

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +N A E+F  ME  G   D V+YN LI+G C +    +A  L R+MV + I P V+ 
Sbjct: 733 NRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIF 792

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L     +   +  A  L++EM R  V  +  TYN+ I+G C  G + +A  +F  + 
Sbjct: 793 FTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMV 852

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D+  YN LI G CKS R+E  ++LF  +  + LV D  TYN +IHG C  G+++
Sbjct: 853 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLN 912

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  +F  M +  V P+++ +  L+       K  K + ++  +++ ++  D    ++++
Sbjct: 913 VAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIII 972

Query: 374 D 374
            
Sbjct: 973 Q 973



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 190/357 (53%), Gaps = 1/357 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++  +I   C+   +  A ++  +M     +P +VT+ SL+HG C  N  ++A  L   M
Sbjct: 102 SFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASM 161

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-VRPNAFTYSTLMDGFCLTGK 136
           +  G +P+VV +N ++D LCKNG ++ A  LL+ M ++  +  +  TY+TL+ G C +G+
Sbjct: 162 VKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGE 221

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
             +A  +   M       D  ++  LI+ + K   ++EA  LY++M+   I P  VTYN+
Sbjct: 222 WRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNS 281

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  GL    ++ HA K F+ M       +  TYNT I+G CK+  + + ++LF+ +    
Sbjct: 282 LINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREG 341

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              D   YN LI G C+ G+L +A ++F  +    +  D++T+ I++HGLC +G++  A 
Sbjct: 342 LVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAM 401

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
             F DM        ++ +  +IHG  + +K  +  EL  ++  + V PDA   ++++
Sbjct: 402 VKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMI 458



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 155/293 (52%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTYNT++ GLC  G   +A  +   M    INPDV T+ +LI       + +EA+ L+ +
Sbjct: 207 VTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQ 266

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+   + P+ VT+N +++ LC +G++  A +  DLM  +   PN  TY+TL++GFC + +
Sbjct: 267 MLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRR 326

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +    +LF  M   G   D  +YN LI+GYC+  ++  A  ++  MVS G+ P ++T+  
Sbjct: 327 VEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCI 386

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  GL    ++  A+  F +M+  +       YN  I GLCK   + EA ELF  L +  
Sbjct: 387 LLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEG 446

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
            + D + Y  +I GLCK+G    A ELFR +    ++      ++  HG  N 
Sbjct: 447 VKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAEDGHLGEHGTNNQ 499



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 170/344 (49%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
           D A  LF +M      P +V +  ++  +   N ++    LF +M + G+   + +F ++
Sbjct: 597 DDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTIL 656

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           +   C+  +   A  LL  M++   +P+  T  +L++GFC   +   A  L  SM  +G 
Sbjct: 657 IHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGL 716

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
           + + V YN +ING CKN+++  AL ++  M  KGI    VTYNTL  GL    +   A +
Sbjct: 717 EPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAAR 776

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           L  +M +  +  +   +   ID   K G ++EA  L++ +       +I  YN LI+G C
Sbjct: 777 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFC 836

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
             GRL  A  +F  +  +    DVVTYN +I G C   +++    LF +M    +  +  
Sbjct: 837 IQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAF 896

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            + TLIHG+ +  K +   ++ ++M +  V PD    ++++D L
Sbjct: 897 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCL 940



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 164/345 (47%), Gaps = 36/345 (10%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
           + A  LFL+M      P VV +  L+  + +   +        +M   G+   + +F ++
Sbjct: 47  EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTIL 106

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           +   C+  ++  A  +L  M++    P+  T+ +L+ GFCL  +I+ A  L  SM   G 
Sbjct: 107 IHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGY 166

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-IKPTVVTYNTLFLGLF---EIHQVE 208
           + + V YN LI+  CKN +V  AL L  EM  KG +   +VTYNTL  GL    E  Q  
Sbjct: 167 EPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAA 226

Query: 209 HALK--------------------------------LFEEMQRDDVAADTSTYNTFIDGL 236
             L+                                L+++M +  +  +T TYN+ I+GL
Sbjct: 227 RILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           C +G +  A + F  +    C  ++  YN LI+G CKS R+E  ++LF+ + R  LV D 
Sbjct: 287 CMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDT 346

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            TYN +IHG C  G++  A D+F  M    V P++I    L+HG 
Sbjct: 347 FTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGL 391



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 160/313 (51%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           Y   +    H   +++A  LF EM+     PS+V F  ++  + K  K D    L   M 
Sbjct: 583 YRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKME 642

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
              +  + ++++ L+  FC   + + A  L G M  +G +   V+   L+NG+C+    +
Sbjct: 643 NLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQ 702

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           EA+SL   M   G++P VV YNT+  GL +   + +AL++F  M++  + AD  TYNT I
Sbjct: 703 EAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLI 762

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
            GLC +G   +A  L R +   K + ++  +  LID   K G L  A  L++ + RR + 
Sbjct: 763 SGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVH 822

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            +++TYN +I+G C  G++  A  +F  M      P+V+ + TLI GF +  +    ++L
Sbjct: 823 PNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 882

Query: 354 LHKMKEKKVMPDA 366
             +M  + ++ DA
Sbjct: 883 FCEMTHQGLVGDA 895



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 154/308 (50%), Gaps = 1/308 (0%)

Query: 60  GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
           G  H+  + +A  LF EM+     PSVV F  ++  +    + +        M    +  
Sbjct: 39  GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           + ++++ L+  FC   +++ A  + G M  +G     V++  L++G+C    + +A SL 
Sbjct: 99  DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD-VAADTSTYNTFIDGLCK 238
             MV  G +P VV YNTL   L +   V  AL+L  EM++   +AAD  TYNT + GLC 
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           +G   +A  + R +   +   D+  +  LID   K G L+ A EL++ + +  +  + VT
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVT 278

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           YN +I+GLC  G++  A   F  M      PNV+ + TLI+GF +  +    ++L  +M 
Sbjct: 279 YNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMY 338

Query: 359 EKKVMPDA 366
            + ++ D 
Sbjct: 339 REGLVGDT 346



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 125/239 (52%), Gaps = 4/239 (1%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            PN +TYN++I+G C +G +  AK +F  M  +   PDVVTYN+LI G C +    +  +L
Sbjct: 823  PNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 882

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            F EM  QG+     T+N ++   C+ GK++ A ++ + MV   V P+  TY+ L+D  C 
Sbjct: 883  FCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCN 942

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             GKI +A  +   ++      D ++YNI+I G C+N +V+EA  L+R +  KG+K   + 
Sbjct: 943  NGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIA 1002

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y T+  GL        A KL   M+ D        Y    D   ++ Y   + EL + +
Sbjct: 1003 YITMISGLCRNGLRREADKLCTRMKEDGFMPSERIY----DETLRDHYTSLSAELIKAV 1057



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 105/184 (57%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            C P+ VTYNT+I G CK   V+    LF +M  + +  D  TYN+LIHG C A   N A+
Sbjct: 856  CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQ 915

Query: 72   RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            ++F  M+D GV P +VT+N+++D LC NGK+++A  +++ + +  +  +  TY+ ++ G 
Sbjct: 916  KVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGM 975

Query: 132  CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            C   K+  A  LF S+   G K D ++Y  +I+G C+N    EA  L   M   G  P+ 
Sbjct: 976  CRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSE 1035

Query: 192  VTYN 195
              Y+
Sbjct: 1036 RIYD 1039



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/176 (36%), Positives = 90/176 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYNT+I+G CK   V+    LF +M  E +  D  TYN+LIHG C       AK
Sbjct: 307 CFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAK 366

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M+  GV P ++T  +++  LC NG++  A    + M   +       Y+ ++ G 
Sbjct: 367 DIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGL 426

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           C   K+  A ELF  +   G K D  +Y I+I G CKN    EA  L+R M   GI
Sbjct: 427 CKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGI 482



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 124/277 (44%), Gaps = 36/277 (12%)

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           + ++A  L   MVQ    P+   ++ L+       +          ME  G  HD  S+ 
Sbjct: 45  RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFT 104

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           ILI+ +C+   +  ALS+  +M+  G  P++VT+ +L  G    +++  A  L   M   
Sbjct: 105 ILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASM--- 161

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
                            K+GY                E ++  YN LID LCK+G + IA
Sbjct: 162 ----------------VKSGY----------------EPNVVVYNTLIDCLCKNGDVNIA 189

Query: 281 LELFRSLPRR-VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           LEL   + ++  L AD+VTYN ++ GLC  G+  +A  +  DM +  + P+V  F  LI 
Sbjct: 190 LELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALID 249

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            FV+     +  EL  +M +  + P+    + +++ L
Sbjct: 250 AFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 130/371 (35%), Positives = 211/371 (56%), Gaps = 7/371 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ +T+  +IDGLCK G V+ A+ +   M    + P+VVTYN+L+HGLC +    EA +
Sbjct: 599 QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQ 658

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              EM+  G  P  +T+  ++  LC+  + D+A +L+  +      P+  TY+ L+DG  
Sbjct: 659 FLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLW 718

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM---VSKGIKP 189
            +G+  +A  +   M   G   D V+YN LI+  CK  ++EEA  L+ +M   VS+   P
Sbjct: 719 KSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVP 778

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRD--DVAADTSTYNTFIDGLCKNGYIVEAVE 247
            VVTY+ L  GL ++ +++ A +L +EM R   DV  +  TYN+F+DGLCK   + EA E
Sbjct: 779 NVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACE 838

Query: 248 LFRTL--GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           L R+L  G L+   D   ++ LIDGLCK G+ + A  +F  +     V +VVTYN++++G
Sbjct: 839 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNG 898

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC   +M++AH +   M +  V P+VI +  L+  F + +   + +ELLH M  +   P+
Sbjct: 899 LCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPN 958

Query: 366 ASIVSMVVDLL 376
               + ++D L
Sbjct: 959 VVTFNSIIDGL 969



 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/403 (34%), Positives = 204/403 (50%), Gaps = 42/403 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T  +N  I+GL K G V +A  ++ +M    + PD VT+N LI G C A ++ +A  L
Sbjct: 530 PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASAL 589

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+ + +QP V+TF  ++D LCK G+++ A  +LDLM    V PN  TY+ L+ G C 
Sbjct: 590 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCK 649

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G+I  A +    M S GC  D ++Y  L+   C+    ++AL L  E+ S G  P  VT
Sbjct: 650 SGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVT 709

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID------------------- 234
           YN L  GL++  Q E A+ + EEM       D  TYNT ID                   
Sbjct: 710 YNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMS 769

Query: 235 -------------------GLCKNGYIVEAVELFRTLGILKCEL--DIQAYNCLIDGLCK 273
                              GLCK G I EA EL + +    C++  +I  YN  +DGLCK
Sbjct: 770 SRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCK 829

Query: 274 SGRLEIALELFRSLPRRVL--VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
              +  A EL RSL    L    D VT++ +I GLC  GQ D+A ++F DM      PNV
Sbjct: 830 QSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNV 889

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + +  L++G  + +K  +   ++  M +K V PD    S++VD
Sbjct: 890 VTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVD 932



 Score =  230 bits (587), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 128/357 (35%), Positives = 201/357 (56%), Gaps = 9/357 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTYNTII+GLCK   +     LF ++     +PDVVTYN+LI  LC A D  EA+RL
Sbjct: 214 PTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRL 273

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR--DVRPNAFTYSTLMDGF 131
             +M  +   P+VVT++V+++ LCK G++DEA  L+  M ++  DV PN  TY++ +DG 
Sbjct: 274 HGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 333

Query: 132 CLTGKINRAEELFGSME--SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           C       A EL  S+   S+    D V+++ LI+G CK  +++EA S++ +M++ G  P
Sbjct: 334 CKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVP 393

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V+TYN L  GL +  ++E A  + E M    V  D  TY+  +D  CK   + EA+EL 
Sbjct: 394 NVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELL 453

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP-RRVLVADVVTYNIMIHGLCN 308
             +    C  ++  +N +IDGLCKS R   A ++F  +  +  LV D +TY  +I GL  
Sbjct: 454 HGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFR 513

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            G+  +A  L   M +    P+   F   I+G  ++   S+ +++ ++M E +++PD
Sbjct: 514 TGRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPD 566



 Score =  227 bits (578), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 122/356 (34%), Positives = 197/356 (55%), Gaps = 7/356 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN--INPDVVTYNSLIHGLCHANDWNEAK 71
           PN +TYN+ +DGLCK+    +A  L   ++  +  ++PD VT+++LI GLC     +EA 
Sbjct: 321 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEAC 380

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F +M+  G  P+V+T+N +++ LCK  KM+ A  +++ MV + V P+  TYS L+D F
Sbjct: 381 SVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF 440

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPT 190
           C   +++ A EL   M S GC  + V++N +I+G CK+    EA  ++ +M  K G+ P 
Sbjct: 441 CKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPD 500

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            +TY TL  GLF   +   A  L + M       DT  +N  I+GL K G +  A++++ 
Sbjct: 501 KITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYN 556

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +  L+   D   +N LI G CK+G  E A  LF  +  + L  DV+T+  +I GLC  G
Sbjct: 557 RMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAG 616

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           Q++ A D+   M    V PNV+ +  L+HG  +  +  +  + L +M     +PD+
Sbjct: 617 QVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDS 672



 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 219/441 (49%), Gaps = 78/441 (17%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P+ VT+N +I G CK G  ++A ALF +M  +N+ PDV+T+ +LI GLC A     A+ +
Sbjct: 565  PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDI 624

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
               M + GV P+VVT+N ++  LCK+G+++EA + L+ MV     P++ TY +L+   C 
Sbjct: 625  LDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCR 684

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              + + A +L   ++S G   D V+YNIL++G  K+ + E+A+++  EMV KG  P VVT
Sbjct: 685  ASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVT 744

Query: 194  YNTLF--------------------------------------LGLFEIHQVEHALKLFE 215
            YNTL                                        GL ++ +++ A +L +
Sbjct: 745  YNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQ 804

Query: 216  EMQRD--DVAADTSTYNTFIDGLCKNGYIVEAVELFRTL-------------------GI 254
            EM R   DV  +  TYN+F+DGLCK   + EA EL R+L                   G+
Sbjct: 805  EMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 864

Query: 255  LKCELDIQA------------------YNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
             KC    +A                  YN L++GLCK+ ++E A  +  S+  + +  DV
Sbjct: 865  CKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDV 924

Query: 297  VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
            +TY++++   C    +D+A +L   M      PNV+ F ++I G  + ++  +  ++   
Sbjct: 925  ITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDD 984

Query: 357  MKEKK-VMPDASIVSMVVDLL 376
            M  K  + PD      ++D L
Sbjct: 985  MTLKHGLAPDKITYCTLIDGL 1005



 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 128/347 (36%), Positives = 192/347 (55%), Gaps = 12/347 (3%)

Query: 5    NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVTYNSLIHGLC 62
            +  +   C PN VTY+ +I+GLCK G +D+A+ L  +M  K  ++ P+++TYNS + GLC
Sbjct: 769  SSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLC 828

Query: 63   HANDWNEAKRLFFEMMDQG--VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
              +   EA  L   + D    V P  VTF+ ++D LCK G+ DEA  + D M+     PN
Sbjct: 829  KQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPN 888

Query: 121  AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
              TY+ LM+G C T K+ RA  +  SM   G   D ++Y++L++ +CK   V+EAL L  
Sbjct: 889  VVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLH 948

Query: 181  EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ-RDDVAADTSTYNTFIDGLCKN 239
             M S+G  P VVT+N++  GL +  Q   A ++F++M  +  +A D  TY T IDGL + 
Sbjct: 949  GMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRT 1008

Query: 240  GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
            G+  +A  L   +     + D  A+NC I+GL K G +  AL     L    LV D VT+
Sbjct: 1009 GWAGQAEVLLDAMP----DPDTYAFNCCINGLSKLGDVSRALHRMLELE---LVPDKVTF 1061

Query: 300  NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
            NI+I G C  G  ++A  LF +M    + P+V+ F  LI G  +  +
Sbjct: 1062 NILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 1108



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 199/399 (49%), Gaps = 38/399 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+TVT++T+IDGLCK G +D+A ++F  M      P+V+TYN+L++GLC A+    A  
Sbjct: 357 SPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHA 416

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M+D+GV P V+T++V++D  CK  ++DEA  LL  M  R   PN  T+++++DG C
Sbjct: 417 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC 476

Query: 133 LTGKINRAEELFGSMESMGCKH-----------------------------------DDV 157
              K +R+ E F   + M  KH                                   D  
Sbjct: 477 ---KSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTY 533

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           ++N  ING  K  +V  AL +Y  M+   + P  VT+N L  G  +    E A  LFEEM
Sbjct: 534 AFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEM 593

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
              ++  D  T+   IDGLCK G +  A ++   +G L    ++  YN L+ GLCKSGR+
Sbjct: 594 VAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRI 653

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           E A +    +     V D +TY  +++ LC   + D A  L  +++     P+ + +  L
Sbjct: 654 EEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNIL 713

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + G  +  +  + I +L +M  K   PD    + ++D L
Sbjct: 714 VDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSL 752



 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 206/370 (55%), Gaps = 11/370 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TY T+IDGL + G   +A+AL   M     +PD   +N  I+GL    D + A ++
Sbjct: 499 PDKITYCTLIDGLFRTGRAGQAEALLDAMP----DPDTYAFNCCINGLSKLGDVSRALQV 554

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           +  M++  + P  VTFN+++   CK G  ++AS L + MV ++++P+  T+  L+DG C 
Sbjct: 555 YNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCK 614

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A ++   M ++G   + V+YN L++G CK+  +EEA     EMVS G  P  +T
Sbjct: 615 AGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSIT 674

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +L   L    + + AL+L  E++      DT TYN  +DGL K+G   +A+ +   + 
Sbjct: 675 YGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMV 734

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV---LVADVVTYNIMIHGLCNDG 310
                 D+  YN LID LCK+G LE A  L   +  RV    V +VVTY+++I+GLC  G
Sbjct: 735 GKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVG 794

Query: 311 QMDKAHDLFLDMEENA--VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK--KVMPDA 366
           ++D+A +L  +M   +  V PN+I + + + G  + +  ++  EL+  +++   +V PD 
Sbjct: 795 RIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDT 854

Query: 367 SIVSMVVDLL 376
              S ++D L
Sbjct: 855 VTFSTLIDGL 864



 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/360 (35%), Positives = 204/360 (56%), Gaps = 15/360 (4%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P+TVTYN ++DGL K G  ++A  +  +M G+  +PDVVTYN+LI  LC A D  EA+RL
Sbjct: 705  PDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRL 764

Query: 74   FFEMMDQGVQ---PSVVTFNVIMDELCKNGKMDEASRLLDLMVQR--DVRPNAFTYSTLM 128
              +M  +  +   P+VVT++V+++ LCK G++DEA  L+  M+++  DV PN  TY++ +
Sbjct: 765  HGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFL 824

Query: 129  DGFCLTGKINRAEELFGSME--SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
            DG C    +  A EL  S+   S+    D V+++ LI+G CK  + +EA +++ +M++ G
Sbjct: 825  DGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGG 884

Query: 187  IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
              P VVTYN L  GL +  ++E A  + E M    V  D  TY+  +D  CK  ++ EA+
Sbjct: 885  YVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEAL 944

Query: 247  ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP-RRVLVADVVTYNIMIHG 305
            EL   +    C  ++  +N +IDGLCKS +   A ++F  +  +  L  D +TY  +I G
Sbjct: 945  ELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDG 1004

Query: 306  LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            L   G   +A  L   M +    P+   F   I+G  ++   S+    LH+M E +++PD
Sbjct: 1005 LFRTGWAGQAEVLLDAMPD----PDTYAFNCCINGLSKLGDVSRA---LHRMLELELVPD 1057



 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 118/356 (33%), Positives = 185/356 (51%), Gaps = 8/356 (2%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            C P+++TY +++  LC+    D A  L  ++K    +PD VTYN L+ GL  +    +A 
Sbjct: 668  CVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAI 727

Query: 72   RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR---PNAFTYSTLM 128
             +  EM+ +G  P VVT+N ++D LCK G ++EA RL   M  R  R   PN  TYS L+
Sbjct: 728  TVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLI 787

Query: 129  DGFCLTGKINRAEELFGSMESMGCK--HDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
            +G C  G+I+ A EL   M    C    + ++YN  ++G CK   + EA  L R +    
Sbjct: 788  NGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGS 847

Query: 187  IK--PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
            ++  P  VT++TL  GL +  Q + A  +F++M       +  TYN  ++GLCK   +  
Sbjct: 848  LRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMER 907

Query: 245  AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
            A  +  ++       D+  Y+ L+D  CK+  ++ ALEL   +  R    +VVT+N +I 
Sbjct: 908  AHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIID 967

Query: 305  GLCNDGQMDKAHDLFLDME-ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
            GLC   Q  +A  +F DM  ++ +AP+ I + TLI G  R     +   LL  M +
Sbjct: 968  GLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD 1023



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 196/369 (53%), Gaps = 6/369 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K    ++N  ++ L K G   KA  LF         P+  TY++L+     A    E   
Sbjct: 108 KHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTL 167

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-VRPNAFTYSTLMDGF 131
            FF  +    + SV  +N+++  LC+ G+   A  +    + RD V P   TY+T+++G 
Sbjct: 168 GFFRRIRSSSR-SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGL 226

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C + ++    ELF  +   G   D V+YN LI+  CK  ++EEA  L+ +M S+   P V
Sbjct: 227 CKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNV 286

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRD--DVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           VTY+ L  GL ++ +++ A +L +EM R   DV  +  TYN+F+DGLCK     EA EL 
Sbjct: 287 VTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM 346

Query: 250 RTL--GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           R+L  G L+   D   ++ LIDGLCK G+++ A  +F  +     V +V+TYN +++GLC
Sbjct: 347 RSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLC 406

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
              +M++AH +   M +  V P+VI +  L+  F + ++  + +ELLH M  +   P+  
Sbjct: 407 KADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVV 466

Query: 368 IVSMVVDLL 376
             + ++D L
Sbjct: 467 TFNSIIDGL 475



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/309 (36%), Positives = 172/309 (55%), Gaps = 10/309 (3%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN--INPDVVTYNSLIHGLCHANDWNEAK 71
            PN +TYN+ +DGLCK+  + +A  L   ++  +  ++PD VT+++LI GLC     +EA 
Sbjct: 815  PNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEAC 874

Query: 72   RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             +F +M+  G  P+VVT+NV+M+ LCK  KM+ A  +++ MV + V P+  TYS L+D F
Sbjct: 875  NVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAF 934

Query: 132  CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPT 190
            C    ++ A EL   M S GC  + V++N +I+G CK+ +  EA  ++ +M  K G+ P 
Sbjct: 935  CKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPD 994

Query: 191  VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             +TY TL  GLF       A  L + M       DT  +N  I+GL K G +  A+    
Sbjct: 995  KITYCTLIDGLFRTGWAGQAEVLLDAMPD----PDTYAFNCCINGLSKLGDVSRALHRML 1050

Query: 251  TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             L ++    D   +N LI G CK+G  E A  LF  +  + L  DV+T+  +I GLC  G
Sbjct: 1051 ELELVP---DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAG 1107

Query: 311  QMDKAHDLF 319
            Q++   D+ 
Sbjct: 1108 QVEATWDIM 1116


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 126/347 (36%), Positives = 203/347 (58%), Gaps = 5/347 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ + YN +IDG CK   VD+A  LF ++  +N+ P + +YNSLI GLC++   +  K+
Sbjct: 332 EPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKK 391

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM      P VVT+N+++D LCK G++ EA  +L +M+++ V+PN  TY+ +MDG+C
Sbjct: 392 LLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYC 451

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L   +N A+++F  M   G + D ++YN+LINGYCK + V+EA+ L++EM  K + P + 
Sbjct: 452 LRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIA 511

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YN+L  GL  + ++ H  +L +EM     + D  TYN  +D  CK     +A+ LFR +
Sbjct: 512 SYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI 571

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             GI     D    + ++D LCK  +L++A +  + L       +V TY I+I+ LC DG
Sbjct: 572 VEGIWP---DFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDG 628

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
              +A  L   ME+N   P+ I F  +I   ++ N+  K  +L  +M
Sbjct: 629 SFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEM 675



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 200/397 (50%), Gaps = 34/397 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+N +ID LCKEG + +A+ +   M      PD+VTYN+L+ G C   + +EA+ L
Sbjct: 263 PDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAREL 322

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+ +G++P V+ +NV++D  CK   +DEA  L   +  +++ P   +Y++L+DG C 
Sbjct: 323 FNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCN 382

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G+I+  ++L   M       D V+YNILI+  CK   + EAL +   M+ KG+KP +VT
Sbjct: 383 SGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVT 442

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  G    + V  A  +F  M +  +  D   YN  I+G CK   + EA+ LF+ + 
Sbjct: 443 YNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMR 502

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 DI +YN LIDGLC  GR+    EL   +       DV+TYNI++   C     D
Sbjct: 503 HKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFD 562

Query: 314 KAHDLF--------------------------LDMEENAV--------APNVIIFVTLIH 339
           KA  LF                          L M E+A+        +PNV  +  LI+
Sbjct: 563 KAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILIN 622

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              +     + + LL KM++    PDA    +++ +L
Sbjct: 623 ALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVL 659



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 118/353 (33%), Positives = 182/353 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VT+NTII+G C  G + KA      +  +    D  TY +LI+GL        A  
Sbjct: 122 QPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALH 181

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM    VQP++V ++ ++D LCK+G + +A  L   + +R +  +A TY++L+DG C
Sbjct: 182 LLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCC 241

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+     +L   M       DD ++NILI+  CK   + EA  +   M  +G KP +V
Sbjct: 242 SVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIV 301

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L  G      V  A +LF  M +  +  D   YN  IDG CK   + EA+ LF+ L
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   I +YN LIDGLC SGR+    +L   +       DVVTYNI+I  LC +G++
Sbjct: 362 CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRI 421

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +A  + + M +  V PN++ +  ++ G+   N  +   ++ ++M +  + PD
Sbjct: 422 LEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPD 474



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 189/372 (50%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N  + V   P T  ++ ++  + + G    A +LF Q++ + I+P + T+  LI+   H 
Sbjct: 44  NRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQ 103

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
           +    A  L   ++  G QP++VTFN I++  C NG + +A      ++ +    + FTY
Sbjct: 104 SHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTY 163

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
            TL++G    G+I  A  L   ME    + + V Y+ LI+G CK+  V +AL L  ++  
Sbjct: 164 GTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGE 223

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           +GI    VTYN+L  G   + + +   +L  +M R++V  D  T+N  ID LCK G I+E
Sbjct: 224 RGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILE 283

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A  +   +     + DI  YN L++G C    +  A ELF  + +R L  DV+ YN++I 
Sbjct: 284 AQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLID 343

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G C    +D+A  LF ++    + P +  + +LI G     + S V +LL +M      P
Sbjct: 344 GYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPP 403

Query: 365 DASIVSMVVDLL 376
           D    ++++D L
Sbjct: 404 DVVTYNILIDAL 415



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 174/350 (49%)

Query: 27  CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           C+   VD A   F +M      P    ++ L+  +     +  A  LF ++  +G+ PS+
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
            TF ++++          A  LL  +++   +PN  T++T+++GFC+ G I +A +   +
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           + + G   D  +Y  LING  KN +++ AL L +EM    ++P +V Y+ L  GL +   
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           V  AL L  ++    +  D  TYN+ IDG C  G   E  +L   +     + D   +N 
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LID LCK GR+  A  +   + +R    D+VTYN ++ G C+   + +A +LF  M +  
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + P+V+ +  LI G+ +     + + L  ++  K ++P  +  + ++D L
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGL 380



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 157/316 (49%)

Query: 59  HGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR 118
           H  C   + ++A   F  M+     P    F+ ++  + + G    A  L   +  + + 
Sbjct: 28  HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           P+  T++ L++ +        A  L  ++   G + + V++N +ING+C N  + +AL  
Sbjct: 88  PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
            + ++++G      TY TL  GL +  Q++ AL L +EM++  V  +   Y+  IDGLCK
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK 207

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           +G++ +A+ L   +G     LD   YN LIDG C  GR +   +L   + R  +  D  T
Sbjct: 208 DGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYT 267

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           +NI+I  LC +G++ +A  +   M +    P+++ +  L+ G+       +  EL ++M 
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV 327

Query: 359 EKKVMPDASIVSMVVD 374
           ++ + PD    ++++D
Sbjct: 328 KRGLEPDVLNYNVLID 343



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 34/209 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ + YN +I+G CK   VD+A  LF +M+ +N+ PD+ +YNSLI GLC+       + 
Sbjct: 472 EPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQE 531

Query: 73  LFFEMMDQGVQPSVVTFNV----------------------------------IMDELCK 98
           L  EM D G  P V+T+N+                                  I+D LCK
Sbjct: 532 LLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCK 591

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
             K+  A   L  ++     PN  TY+ L++  C  G    A  L   ME      D ++
Sbjct: 592 GEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAIT 651

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGI 187
           + I+I    +  E ++A  L  EM+++G+
Sbjct: 652 FEIIIGVLLQRNETDKAEKLREEMIARGL 680



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 42/71 (59%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TY  +I+ LCK+G   +A  L  +M+  +  PD +T+  +I  L   N+ ++A+
Sbjct: 610 CSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAE 669

Query: 72  RLFFEMMDQGV 82
           +L  EM+ +G+
Sbjct: 670 KLREEMIARGL 680


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  241 bits (614), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 120/286 (41%), Positives = 184/286 (64%), Gaps = 4/286 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VT++ ++D LCKEG V +A ++F +M    + PD+VTY+SLIHG+C ++ W E+  
Sbjct: 311 KPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESST 370

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+ + ++P VVTF++ +D  CK G + EA  +++LM++R +RPN  TY++LMDG+C
Sbjct: 371 LLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYC 430

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L  +++ A ++F  M + GC  D +SYNILI GYCK++ ++EA  L+ EM  KG+ P  +
Sbjct: 431 LHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSI 490

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+ TL  GL +  +   A +LF++M       D  TY+T + G CK+G++ EA+ LF  L
Sbjct: 491 THTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEAL 550

Query: 253 GILKCELDIQAYNC--LIDGLCKSGRLEIALELFRSLPRRVLVADV 296
              K +L      C  L+ G+CK+G+LE A ELF SL    L  DV
Sbjct: 551 K--KSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score =  238 bits (608), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 125/354 (35%), Positives = 200/354 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P  V+Y+ IID LCK   V++A  LF  M+   I+P VVTYNSLI+G+C++  W +A 
Sbjct: 240 CEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQAS 299

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM++  ++P VVTF++++D LCK G + EA  +   M+Q  + P+  TYS+L+ G 
Sbjct: 300 ILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGV 359

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +     +  L   M S   + D V+++I ++ +CK   V EA S+   M+ +G++P V
Sbjct: 360 CKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNV 419

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN+L  G     Q++ A K+F+ M     A D  +YN  I G CK+  I EA +LF  
Sbjct: 420 VTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDE 479

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       +   +  LI GLC++GR   A ELF+ +       D++TY+ ++ G C  G 
Sbjct: 480 MSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGH 539

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +D+A  LF  ++++ + PN +I   L+ G  +  K     EL   +  +++ PD
Sbjct: 540 LDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPD 593



 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 195/361 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P   T+  I++GLCK G    A     +M   +  P+VV+Y+ +I  LC     NEA  
Sbjct: 206 QPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVD 265

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF+ M   G+ P+VVT+N ++  +C +G+  +AS L   M++ +++P+  T+S L+D  C
Sbjct: 266 LFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALC 325

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  +FG M  +  + D V+Y+ LI+G CK+   +E+ +L  EM+S+ I+P VV
Sbjct: 326 KEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVV 385

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++       +   V  A  +   M    +  +  TYN+ +DG C +  + EA ++F  +
Sbjct: 386 TFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIM 445

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D+ +YN LI G CKS R++ A +LF  +  + L  + +T+  +I GLC  G+ 
Sbjct: 446 VNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRP 505

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A +LF  M  +   P++I + TL+ GF +     + + L   +K+ ++ P+  I  ++
Sbjct: 506 YAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKIL 565

Query: 373 V 373
           +
Sbjct: 566 L 566



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 187/353 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ +T+NT+I+GLC EG + +A      +      P V T+  +++GLC     + A  
Sbjct: 171 KPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIV 230

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +M++   +P VV++++I+D LCKN  ++EA  L   M    + P   TY++L+ G C
Sbjct: 231 WMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMC 290

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G+  +A  LF  M     K D V+++IL++  CK   V EALS++ +M+   ++P +V
Sbjct: 291 NSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIV 350

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY++L  G+ +    + +  L  EM   ++  D  T++ ++D  CK G + EA  +   +
Sbjct: 351 TYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLM 410

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++  YN L+DG C   +++ A ++F  +  +    DV++YNI+I G C   ++
Sbjct: 411 IERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERI 470

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           D+A  LF +M    + PN I   TLI G  +  +P    EL  KM      PD
Sbjct: 471 DEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPD 523



 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 188/352 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    +N ++  L +    D   +++ +M+   ++  V T   LI+ LCH +       +
Sbjct: 102 PCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSV 161

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++   G +PS++TFN +++ LC  G++ EA   LD ++ R  +P  +T++ +++G C 
Sbjct: 162 LGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCK 221

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK + A      M  + C+ + VSY+I+I+  CKN+ V EA+ L+  M S GI PTVVT
Sbjct: 222 IGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVT 281

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L  G+    Q + A  LF+EM   ++  D  T++  +D LCK G ++EA+ +F  + 
Sbjct: 282 YNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMI 341

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  E DI  Y+ LI G+CKS   + +  L   +  R +  DVVT++I +   C  G + 
Sbjct: 342 QIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVS 401

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A  +   M E  + PNV+ + +L+ G+   ++  +  ++   M  K   PD
Sbjct: 402 EAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPD 453



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 173/351 (49%), Gaps = 3/351 (0%)

Query: 27  CKEGFV---DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQ 83
           CK G     D A A F QM   N  P +  +N L+  L     ++    ++ +M   GV 
Sbjct: 77  CKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVS 136

Query: 84  PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEEL 143
            SV T  ++++ LC    +     +L  + +   +P+  T++TL++G C+ G+I  A E 
Sbjct: 137 CSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQ 196

Query: 144 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 203
              + S G +    ++ +++NG CK  +   A+   ++MV    +P VV+Y+ +   L +
Sbjct: 197 LDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCK 256

Query: 204 IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQA 263
              V  A+ LF  M+   ++    TYN+ I G+C +G   +A  LF+ +     + D+  
Sbjct: 257 NRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVT 316

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
           ++ L+D LCK G +  AL +F  + +  +  D+VTY+ +IHG+C      ++  L  +M 
Sbjct: 317 FSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEML 376

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
              + P+V+ F   +  F +    S+   +++ M E+ + P+    + ++D
Sbjct: 377 SRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMD 427



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 159/312 (50%)

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
           +++++A   F +M+     P +  FN ++  L +    D    +   M    V  + +T 
Sbjct: 83  SNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTL 142

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + L++  C    +     + G +  +G K   +++N LING C    + EA+     ++S
Sbjct: 143 TILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMS 202

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           +G +PTV T+  +  GL +I +   A+   ++M   D   +  +Y+  ID LCKN  + E
Sbjct: 203 RGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNE 262

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           AV+LF  +  +     +  YN LI G+C SG+ + A  LF+ +    +  DVVT++I++ 
Sbjct: 263 AVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVD 322

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            LC +G + +A  +F  M + A+ P+++ + +LIHG  + +   +   LL++M  + + P
Sbjct: 323 ALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRP 382

Query: 365 DASIVSMVVDLL 376
           D    S+ VD+ 
Sbjct: 383 DVVTFSIWVDVF 394


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  240 bits (613), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 126/347 (36%), Positives = 203/347 (58%), Gaps = 5/347 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ + YN +IDG CK   VD+A  LF ++  +N+ P + +YNSLI GLC++   +  K+
Sbjct: 332 EPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKK 391

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM      P VVT+N+++D LCK G++ EA  +L +M+++ V+PN  TY+ +MDG+C
Sbjct: 392 LLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYC 451

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L   +N A+++F  M   G + D ++YN+LINGYCK + V+EA+ L++EM  K + P + 
Sbjct: 452 LRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIA 511

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YN+L  GL  + ++ H  +L +EM     + D  TYN  +D  CK     +A+ LFR +
Sbjct: 512 SYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI 571

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             GI     D    + ++D LCK  +L++A +  + L       +V TY I+I+ LC DG
Sbjct: 572 VEGIWP---DFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDG 628

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
              +A  L   ME+N   P+ I F  +I   ++ N+  K  +L  +M
Sbjct: 629 SFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEM 675



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 200/397 (50%), Gaps = 34/397 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+N +ID LCKEG + +A+ +   M      PD+VTYN+L+ G C   + +EA+ L
Sbjct: 263 PDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAREL 322

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+ +G++P V+ +NV++D  CK   +DEA  L   +  +++ P   +Y++L+DG C 
Sbjct: 323 FNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCN 382

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G+I+  ++L   M       D V+YNILI+  CK   + EAL +   M+ KG+KP +VT
Sbjct: 383 SGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVT 442

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  G    + V  A  +F  M +  +  D   YN  I+G CK   + EA+ LF+ + 
Sbjct: 443 YNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMR 502

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 DI +YN LIDGLC  GR+    EL   +       DV+TYNI++   C     D
Sbjct: 503 HKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFD 562

Query: 314 KAHDLF--------------------------LDMEENAV--------APNVIIFVTLIH 339
           KA  LF                          L M E+A+        +PNV  +  LI+
Sbjct: 563 KAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILIN 622

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              +     + + LL KM++    PDA    +++ +L
Sbjct: 623 ALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVL 659



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/353 (33%), Positives = 182/353 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VT+NTII+G C  G + KA      +  +    D  TY +LI+GL        A  
Sbjct: 122 QPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALH 181

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM    VQP++V ++ ++D LCK+G + +A  L   + +R +  +A TY++L+DG C
Sbjct: 182 LLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCC 241

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+     +L   M       DD ++NILI+  CK   + EA  +   M  +G KP +V
Sbjct: 242 SVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIV 301

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L  G      V  A +LF  M +  +  D   YN  IDG CK   + EA+ LF+ L
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   I +YN LIDGLC SGR+    +L   +       DVVTYNI+I  LC +G++
Sbjct: 362 CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRI 421

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +A  + + M +  V PN++ +  ++ G+   N  +   ++ ++M +  + PD
Sbjct: 422 LEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPD 474



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 189/372 (50%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N  + V   P T  ++ ++  + + G    A +LF Q++ + I+P + T+  LI+   H 
Sbjct: 44  NRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQ 103

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
           +    A  L   ++  G QP++VTFN I++  C NG + +A      ++ +    + FTY
Sbjct: 104 SHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTY 163

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
            TL++G    G+I  A  L   ME    + + V Y+ LI+G CK+  V +AL L  ++  
Sbjct: 164 GTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGE 223

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           +GI    VTYN+L  G   + + +   +L  +M R++V  D  T+N  ID LCK G I+E
Sbjct: 224 RGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILE 283

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A  +   +     + DI  YN L++G C    +  A ELF  + +R L  DV+ YN++I 
Sbjct: 284 AQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLID 343

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G C    +D+A  LF ++    + P +  + +LI G     + S V +LL +M      P
Sbjct: 344 GYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPP 403

Query: 365 DASIVSMVVDLL 376
           D    ++++D L
Sbjct: 404 DVVTYNILIDAL 415



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 174/350 (49%)

Query: 27  CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           C+   VD A   F +M      P    ++ L+  +     +  A  LF ++  +G+ PS+
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
            TF ++++          A  LL  +++   +PN  T++T+++GFC+ G I +A +   +
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           + + G   D  +Y  LING  KN +++ AL L +EM    ++P +V Y+ L  GL +   
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           V  AL L  ++    +  D  TYN+ IDG C  G   E  +L   +     + D   +N 
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LID LCK GR+  A  +   + +R    D+VTYN ++ G C+   + +A +LF  M +  
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + P+V+ +  LI G+ +     + + L  ++  K ++P  +  + ++D L
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGL 380



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 157/316 (49%)

Query: 59  HGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR 118
           H  C   + ++A   F  M+     P    F+ ++  + + G    A  L   +  + + 
Sbjct: 28  HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           P+  T++ L++ +        A  L  ++   G + + V++N +ING+C N  + +AL  
Sbjct: 88  PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
            + ++++G      TY TL  GL +  Q++ AL L +EM++  V  +   Y+  IDGLCK
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK 207

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           +G++ +A+ L   +G     LD   YN LIDG C  GR +   +L   + R  +  D  T
Sbjct: 208 DGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYT 267

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           +NI+I  LC +G++ +A  +   M +    P+++ +  L+ G+       +  EL ++M 
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV 327

Query: 359 EKKVMPDASIVSMVVD 374
           ++ + PD    ++++D
Sbjct: 328 KRGLEPDVLNYNVLID 343



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 34/209 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ + YN +I+G CK   VD+A  LF +M+ +N+ PD+ +YNSLI GLC+       + 
Sbjct: 472 EPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQE 531

Query: 73  LFFEMMDQGVQPSVVTFNV----------------------------------IMDELCK 98
           L  EM D G  P V+T+N+                                  I+D LCK
Sbjct: 532 LLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCK 591

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
             K+  A   L  ++     PN  TY+ L++  C  G    A  L   ME      D ++
Sbjct: 592 GEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAIT 651

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGI 187
           + I+I    +  E ++A  L  EM+++G+
Sbjct: 652 FEIIIGVLLQRNETDKAEKLREEMIARGL 680



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 8/178 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ +TYN ++D  CK    DKA +LF Q+  E I PD  T ++++  LC       A+ 
Sbjct: 542 SPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAED 600

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
               ++  G  P+V T+ ++++ LCK+G   EA  LL  M   D  P+A T+  ++    
Sbjct: 601 ALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLL 660

Query: 133 LTGKINRAEELFGSMESMGC----KHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
              + ++AE+L   M + G     K  + S+N+        + V E    YR   S  
Sbjct: 661 QRNETDKAEKLREEMIARGLVNIEKSLNQSHNVFFPASSGFQSVTE---FYRVQASHA 715



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 42/71 (59%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TY  +I+ LCK+G   +A  L  +M+  +  PD +T+  +I  L   N+ ++A+
Sbjct: 610 CSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAE 669

Query: 72  RLFFEMMDQGV 82
           +L  EM+ +G+
Sbjct: 670 KLREEMIARGL 680


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  240 bits (613), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 199/365 (54%), Gaps = 3/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYN II+G+C+EG VD A+ L  ++      PD V+Y +L+ GLC +  W++ +
Sbjct: 208 CTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVE 267

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EMM++   P+ VTF++++   C+ G ++ A ++L  M + +   N    + +++  
Sbjct: 268 ELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSI 327

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A +   +M S GC  D +SY  ++ G C+ +   +A  L +EMV     P  
Sbjct: 328 CKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNE 387

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NT    L +   +E A+ L E+MQ         TYN  ++G C  G+I  A+ELFR+
Sbjct: 388 VTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRS 447

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ +   Y  L+ GLC + RL+ A EL   +  R    +VVT+N++++  C  G 
Sbjct: 448 M---PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGF 504

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A +L   M E+   PN+I + TL  G  +       +ELLH +  K V PD    S 
Sbjct: 505 LDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSS 564

Query: 372 VVDLL 376
           ++ +L
Sbjct: 565 IIGIL 569



 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 188/354 (53%), Gaps = 3/354 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN VTY  +++ +CK    ++A A+  +M+ +   P++VTYN +I+G+C     ++A+
Sbjct: 173 CQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 232

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   +   G QP  V++  ++  LC + + D+   L   M++++  PN  T+  L+  F
Sbjct: 233 DLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFF 292

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + RA ++   M    C  +    NI+IN  CK   V++A      M S G  P  
Sbjct: 293 CRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDT 352

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++Y T+  GL    +   A +L +EM R++   +  T+NTFI  LC+ G I +A+ L   
Sbjct: 353 ISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQ 412

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C + +  YN L++G C  G ++ ALELFRS+P +    + +TY  ++ GLCN  +
Sbjct: 413 MQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAER 469

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +D A +L  +M      PNV+ F  L++ F +     + IEL+ +M E    P+
Sbjct: 470 LDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPN 523



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 177/343 (51%), Gaps = 3/343 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
            YNT++ G C+ G +D A+ L   M    + PD  TY  LI  LC      +A  L  +M
Sbjct: 112 AYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDM 168

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           + +G QP+VVT+ V+++ +CKN   ++A  +LD M  +   PN  TY+ +++G C  G++
Sbjct: 169 LRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRV 228

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A +L   + S GC+ D VSY  L+ G C +K  ++   L+ EM+ K   P  VT++ L
Sbjct: 229 DDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDML 288

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
                    VE A+++ ++M   + A +T+  N  I+ +CK G + +A +    +G   C
Sbjct: 289 IRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGC 348

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D  +Y  ++ GLC++ R   A EL + + R     + VT+N  I  LC  G +++A  
Sbjct: 349 NPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIM 408

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           L   M+E+     V+ +  L++GF         +EL   M  K
Sbjct: 409 LIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK 451



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 169/332 (50%), Gaps = 3/332 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  NT   N +I+ +CK+G VD A      M     NPD ++Y +++ GLC A  WN+AK
Sbjct: 313 CATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAK 372

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+     P+ VTFN  +  LC+ G +++A  L++ M +        TY+ L++GF
Sbjct: 373 ELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGF 432

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C+ G I+ A ELF    SM CK + ++Y  L+ G C  + ++ A  L  EM+ +   P V
Sbjct: 433 CVQGHIDSALELF---RSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNV 489

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+N L     +   ++ A++L E+M       +  TYNT  DG+ K+    +A+EL   
Sbjct: 490 VTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHG 549

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L       D+  ++ +I  L K  R+E A+++F       +    + YN ++ GLC   +
Sbjct: 550 LVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHE 609

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           +D A D    M  N   PN   ++ LI G  R
Sbjct: 610 IDNAIDFLAYMVSNGCMPNESTYIILIEGLAR 641



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 166/346 (47%), Gaps = 3/346 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+      +I  LC+ G    A  +    +G     DV  YN+L+ G C     + A+RL
Sbjct: 73  PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL 132

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M    V P   T+  ++  LC  G++ +A  LLD M++R  +PN  TY+ L++  C 
Sbjct: 133 IGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCK 189

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
                +A  +   M + GC  + V+YN++ING C+   V++A  L   + S G +P  V+
Sbjct: 190 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVS 249

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  GL    + +   +LF EM   +   +  T++  I   C+ G +  A+++ + + 
Sbjct: 250 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMT 309

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +C  +    N +I+ +CK GR++ A +   ++       D ++Y  ++ GLC   + +
Sbjct: 310 EHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWN 369

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
            A +L  +M  N   PN + F T I    +     + I L+ +M+E
Sbjct: 370 DAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQE 415



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 93/283 (32%), Positives = 151/283 (53%), Gaps = 3/283 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VT+NT I  LC++G +++A  L  QM+       VVTYN+L++G C     + A 
Sbjct: 383 CPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSAL 442

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M     +P+ +T+  ++  LC   ++D A+ L+  M+ RD  PN  T++ L++ F
Sbjct: 443 ELFRSM---PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFF 499

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G ++ A EL   M   GC  + ++YN L +G  K+   E+AL L   +VSKG+ P V
Sbjct: 500 CQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDV 559

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +T++++   L +  +VE A+++F   Q   +      YN  + GLCK   I  A++    
Sbjct: 560 ITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAY 619

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
           +    C  +   Y  LI+GL + G L+ A +L   L  R +V+
Sbjct: 620 MVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVS 662



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 157/340 (46%), Gaps = 3/340 (0%)

Query: 26  LCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPS 85
           + +E     A+ + L    +   PDV     LI  LC     ++A R+       G    
Sbjct: 50  IAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVD 109

Query: 86  VVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFG 145
           V  +N ++   C+ G +D A RL+  M    V P+A+TY+ L+   C  G++  A  L  
Sbjct: 110 VFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLD 166

Query: 146 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 205
            M   GC+ + V+Y +L+   CKN   E+A+++  EM +KG  P +VTYN +  G+    
Sbjct: 167 DMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREG 226

Query: 206 QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYN 265
           +V+ A  L   +       DT +Y T + GLC +    +  ELF  +    C  +   ++
Sbjct: 227 RVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFD 286

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
            LI   C+ G +E A+++ + +       +    NI+I+ +C  G++D A     +M   
Sbjct: 287 MLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSY 346

Query: 326 AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
              P+ I + T++ G  R  + +   ELL +M      P+
Sbjct: 347 GCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPN 386



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 131/271 (48%), Gaps = 4/271 (1%)

Query: 105 ASRLLDLMVQRDVR-PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILI 163
           A+RL++L   RD   P+ +  + L+   C  G+ + A  +  + E  G   D  +YN L+
Sbjct: 58  AARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLV 117

Query: 164 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVA 223
            GYC+   ++ A  L   M    + P   TY  L   L +  +V  AL L ++M R    
Sbjct: 118 AGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQ 174

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL 283
            +  TY   ++ +CKN    +A+ +   +    C  +I  YN +I+G+C+ GR++ A +L
Sbjct: 175 PNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDL 234

Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
              L       D V+Y  ++ GLC   + D   +LF +M E    PN + F  LI  F R
Sbjct: 235 LNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCR 294

Query: 344 INKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
                + I++L +M E +   + ++ ++V++
Sbjct: 295 GGMVERAIQVLQQMTEHECATNTTLCNIVIN 325


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 128/395 (32%), Positives = 200/395 (50%), Gaps = 32/395 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + YN II G C++   D A     +M    + PDV TYN LI GLC A+  ++A  +
Sbjct: 224 PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEM 283

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+D+GV P  VTFN IMD LCK GK + A  LL +M +R+ RP+  TY+TL+ G C 
Sbjct: 284 LHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCK 343

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              ++RA++L     S G   D V+Y+IL +G CK   ++EA  L +EM  KG  P +VT
Sbjct: 344 QQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVT 403

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL +  + E A +L E +       D  TY   +DGLCK G + +A+++   + 
Sbjct: 404 YNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGML 463

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT--------------- 298
              C   +  Y  L++GLC++GR++ A  +F+ +  +   AD +                
Sbjct: 464 KRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTK 523

Query: 299 -----------------YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
                            YN ++ G C +G++D+  ++F DM      PN+  +  ++ G 
Sbjct: 524 EAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGL 583

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +  K  +    L  M     +PD    ++++D L
Sbjct: 584 CKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGL 618



 Score =  237 bits (604), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 123/343 (35%), Positives = 186/343 (54%), Gaps = 7/343 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP    Y  +    CK G +  A  +F  +     +PD + YN++IHG C  ND + A  
Sbjct: 192 KPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDGALE 247

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              EM ++ V P V T+N+++D LCK  K D+AS +L  MV R V P+  T++++MDG C
Sbjct: 248 FLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLC 307

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK  RA  L   M    C+    +YN LI+G CK + V+ A  L  E VS G  P VV
Sbjct: 308 KAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVV 367

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L  GL +  +++ A +L +EM       +  TYNT IDGLCK     +A EL  +L
Sbjct: 368 TYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESL 427

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D+  Y  ++DGLCK GRL+ AL++   + +R     V+TY  ++ GLC  G++
Sbjct: 428 VSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRV 487

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFV---RINKPSKVIE 352
           D+AH +F +M       + + +V+L++G+    R  +  KV++
Sbjct: 488 DEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD 530



 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/383 (31%), Positives = 200/383 (52%), Gaps = 42/383 (10%)

Query: 12  CKPNTVTYNTII-----------------------------------DGLCKEGFVDKAK 36
           C+P+  TYNT+I                                   DGLCK G +D+A 
Sbjct: 327 CRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAF 386

Query: 37  ALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
            L  +M G+   P++VTYN+LI GLC A+   +A  L   ++  G  P VVT+ +I+D L
Sbjct: 387 ELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGL 446

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           CK G++D+A ++++ M++R   P+  TY+ LM+G C TG+++ A  +F  M S  C  D 
Sbjct: 447 CKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADA 506

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIK--PTVVTYNTLFLGLFEIHQVEHALKLF 214
           ++Y  L+NGYCK+   +EA     + V  GI+  P +  YN L  G  +  +++    +F
Sbjct: 507 LAYVSLVNGYCKSSRTKEA-----QKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVF 561

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           E+M       +  TYN  +DGLCK+G + EA     ++    C  D+ +YN +IDGL K+
Sbjct: 562 EDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKA 621

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            + + A ++   + +  +  D VTYN ++   C + + D A  +  +M +  V P+ + +
Sbjct: 622 SKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTY 681

Query: 335 VTLIHGFVRINKPSKVIELLHKM 357
            TLI G  + N+     EL+H+M
Sbjct: 682 NTLISGLSQTNRLGDAYELMHEM 704



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/392 (31%), Positives = 186/392 (47%), Gaps = 32/392 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +T T N  +  L + G  D+  A+F +M      PD  TY+ +I  LC  N  ++A  
Sbjct: 122 KHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFT 181

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKM------------------------------ 102
           +  +   +G +P V  + ++    CK G++                              
Sbjct: 182 MLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKND 241

Query: 103 -DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
            D A   L  M +R V P+ FTY+ L+DG C   K ++A E+   M   G   D V++N 
Sbjct: 242 CDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNS 301

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           +++G CK  + E A SL   M  +  +P+  TYNTL  GL +   V+ A  L +E     
Sbjct: 302 IMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSG 361

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              D  TY+   DGLCK G I EA EL + +    C  ++  YN LIDGLCK+ + E A 
Sbjct: 362 FVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAY 421

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           EL  SL     V DVVTY I++ GLC +G++DKA  +   M +    P+VI +  L+ G 
Sbjct: 422 ELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGL 481

Query: 342 VRINKPSKVIELLHKMKEKKVMPDA-SIVSMV 372
            R  +  +   +  +M  K    DA + VS+V
Sbjct: 482 CRTGRVDEAHHIFKEMVSKDCTADALAYVSLV 513



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 116/349 (33%), Positives = 187/349 (53%), Gaps = 11/349 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY  +++GLC+ G VD+A  +F +M  ++   D + Y SL++G C ++   EA+
Sbjct: 467 CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQ 526

Query: 72  RLFFEMMDQGVQ--PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           ++       G++  P +  +N +MD  CK G++DE   + + M  R   PN  TY+ +MD
Sbjct: 527 KVV-----DGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMD 581

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C  GK++ A     SM S GC  D VSYNI+I+G  K  + +EA  +  +M+  GI P
Sbjct: 582 GLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPP 641

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             VTYNTL     +  + + A+ + + M +  V  D  TYNT I GL +   + +A EL 
Sbjct: 642 DAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELM 701

Query: 250 RTLGILKCELDI-QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
             +    C +     YN +ID LCK G L+ AL L   +    + A+ VTYNI I  LC 
Sbjct: 702 HEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCK 761

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           +G++D+A  L  +M+      + + + T+I G  +  +  +  +L  +M
Sbjct: 762 EGRLDEASSLLSEMD---TLRDEVSYTTVIIGLCKAEQLDRASKLAREM 807



 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 185/382 (48%), Gaps = 33/382 (8%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C PN VTYNT+IDGLCK    +KA  L   +      PDVVTY  ++ GLC     +
Sbjct: 394 GKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLD 453

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT----- 123
           +A ++   M+ +G  PSV+T+  +M+ LC+ G++DEA  +   MV +D   +A       
Sbjct: 454 KALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLV 513

Query: 124 ---------------------------YSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
                                      Y+ LMDG+C  G+++    +F  M   GC  + 
Sbjct: 514 NGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNI 573

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            +YNI+++G CK+ +V+EA      M S G  P VV+YN +  GLF+  + + A ++ ++
Sbjct: 574 KTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQ 633

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M +  +  D  TYNT +   CK     +AV + + +     + D   YN LI GL ++ R
Sbjct: 634 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNR 693

Query: 277 LEIALELFRSLPRR-VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           L  A EL   + R   +V+   TYN +I  LC +G + +A  L   M  + V  N + + 
Sbjct: 694 LGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYN 753

Query: 336 TLIHGFVRINKPSKVIELLHKM 357
             I    +  +  +   LL +M
Sbjct: 754 IFIDRLCKEGRLDEASSLLSEM 775



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/349 (33%), Positives = 183/349 (52%), Gaps = 7/349 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TYN ++DGLCK G VD+A      M      PDVV+YN +I GL  A+   EA+
Sbjct: 569 CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEAR 628

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++  +M+  G+ P  VT+N +M + CK  + D+A  +L  M++  V P+  TY+TL+ G 
Sbjct: 629 QVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 688

Query: 132 CLTGKINRAEELFGSMESMGCKHDD-VSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
             T ++  A EL   M   GC      +YN +I+  CK   +++AL L   M   G++  
Sbjct: 689 SQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEAN 748

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            VTYN     L +  +++ A  L  EM   D   D  +Y T I GLCK   +  A +L R
Sbjct: 749 TVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAR 805

Query: 251 TLGILK--CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            +  +K  C +    +N LID   K+ RL+ AL L   + +R     V+TYN++I  LC 
Sbjct: 806 EMVAVKGLC-ITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCK 864

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
             ++DKA +LF +M    +  + + +  LI+G     +  + +++L +M
Sbjct: 865 LDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 167/342 (48%), Gaps = 4/342 (1%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
           A   F+            T N  +  L      +    +F  M+D G  P   T+++++ 
Sbjct: 109 AIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIK 168

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            LC+  ++D+A  +LD    R  +P    Y+ L   FC TG++  A E+F ++ S     
Sbjct: 169 SLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----P 224

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D ++YN +I+G+C+  + + AL   +EM  + + P V TYN L  GL +  + + A ++ 
Sbjct: 225 DAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEML 284

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
            EM    V  DT T+N+ +DGLCK G    A  L   +    C      YN LI GLCK 
Sbjct: 285 HEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQ 344

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
             ++ A +L         V DVVTY+I+  GLC  G++D+A +L  +M      PN++ +
Sbjct: 345 QNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTY 404

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            TLI G  + +K  K  ELL  +     +PD    +++VD L
Sbjct: 405 NTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGL 446



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 139/284 (48%), Gaps = 40/284 (14%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT++   CKE   D A  +   M    ++PD VTYN+LI GL   N   +A  L
Sbjct: 641 PDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYEL 700

Query: 74  FFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             EM+  G V  +  T+N I+D LCK G + +A  L+D M    V  N  TY+  +D  C
Sbjct: 701 MHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLC 760

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSY--------------------------------- 159
             G+++ A  L   M+++    D+VSY                                 
Sbjct: 761 KEGRLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITS 817

Query: 160 ---NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
              N+LI+ + K K ++EAL+L   MV +G  P+V+TYN +   L ++ +V+ A +LF+E
Sbjct: 818 HTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDE 877

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
           M    + A + +Y   I GLC  G   EA+++   +    CE+D
Sbjct: 878 MAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEID 921



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 4/207 (1%)

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
           K+ + A+  +     +G K +  T N     L E    +    +FE M     A D+ TY
Sbjct: 104 KDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTY 163

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           +  I  LC+   I +A  +     +   + ++  Y  L    CK+GRL+ ALE+FR++P 
Sbjct: 164 HLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS 223

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
                D + YN +IHG C     D A +   +M E  VAP+V  +  LI G  + +K  K
Sbjct: 224 ----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDK 279

Query: 350 VIELLHKMKEKKVMPDASIVSMVVDLL 376
             E+LH+M ++ V PD    + ++D L
Sbjct: 280 ASEMLHEMVDRGVTPDTVTFNSIMDGL 306



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 39/181 (21%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           NTVTYN  ID LCKEG +D+A +L  +M   +   D V+Y ++I GLC A   + A +L 
Sbjct: 748 NTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLA 804

Query: 75  FEMM------------------------------------DQGVQPSVVTFNVIMDELCK 98
            EM+                                     +G  PSV+T+N+++  LCK
Sbjct: 805 REMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCK 864

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
             K+D+A  L D M  R +  ++ +Y+ L+ G C  G+   A ++   M S  C+ DD+ 
Sbjct: 865 LDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLK 924

Query: 159 Y 159
           +
Sbjct: 925 W 925


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  239 bits (610), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 129/362 (35%), Positives = 203/362 (56%), Gaps = 5/362 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  +IDGLCK G VD+A AL  +M+ + + P  VTYNSLI GLC A   +EA  L
Sbjct: 79  PNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDL 137

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+  G  P + T+  ++   CK+ K D+A R+ + +V R  RP+  TYS L+DG C 
Sbjct: 138 LEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCK 197

Query: 134 TGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            G++  A +LFG M +S  C  + V+YN LI+G+C+  +++EA++L   M   G  P VV
Sbjct: 198 EGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVV 257

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  G  ++ +++ A  L  +M R  +  D  T+ + +DGLC+   + +AV +   +
Sbjct: 258 TYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEM 317

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C   +  YN ++DG C++ +LE A +    L       +VV++NIMI GLC   + 
Sbjct: 318 RRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRS 375

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM-KEKKVMPDASIVSM 371
            +A +L  +       P+V+++ T+I G  R  K  +   +  KM +E   +P++   S 
Sbjct: 376 SEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYST 435

Query: 372 VV 373
           +V
Sbjct: 436 LV 437



 Score =  234 bits (596), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 216/399 (54%), Gaps = 35/399 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  + VTY ++I GLCK   +++A     +M  +  +PDV TY ++IH LC  N  +EA+
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +   EM ++ + P+VVT+ V++D LCK G++DEA  LL  M ++ V P A TY++L+ G 
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGL 125

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   + + A +L   M   GC  D  +Y  LI G+CK+K+ ++AL ++ ++V++G +P V
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VTY+ L  GL +  +++ A+ LF  M +      +T TYN+ I G C+ G + EA+ L  
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +       D+  Y  L++G CK  RL+ A +L   + R+ L  DVVT+  ++ GLC + 
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 311 QMDKA------------------HDLFLD---------------MEENAVAPNVIIFVTL 337
           ++  A                  ++  LD               +EE    PNV+ F  +
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIM 365

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           I G  ++N+ S+ +EL+ + + ++  PD  + + V+D L
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404



 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/352 (34%), Positives = 183/352 (51%), Gaps = 10/352 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TY T+I G CK    D A  +F Q+      PDVVTY+ LI GLC      EA 
Sbjct: 146 CIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAI 205

Query: 72  RLFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            LF  M+  G   P+ VT+N ++   C+ GKMDEA  LL+ M +    P+  TY+TLM+G
Sbjct: 206 DLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNG 265

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC   +++ A +L   M   G   D V++  L++G C+   + +A+ +  EM  K   PT
Sbjct: 266 FCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPT 325

Query: 191 VVTYNTLFLGLFEIHQVEHALK-LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           V TYNT+  G    +Q+E A K + EEM   D   +  ++N  I GLCK     EA+EL 
Sbjct: 326 VYTYNTILDGYCRANQLEEARKFMLEEM---DCPPNVVSFNIMIRGLCKVNRSSEAMELV 382

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS-LPRRVLVADVVTYNIMIHGLCN 308
                 +C  D+  Y  +IDGLC+  +++ A  ++R  L     + + +TY+ ++ GLCN
Sbjct: 383 EEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCN 442

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            G +D+A        E    PN+  +  LI  F + N+     ELL  M ++
Sbjct: 443 AGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQR 490



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 99/176 (56%), Gaps = 7/176 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P   TYNTI+DG C+   +++A+   L+    +  P+VV++N +I GLC  N  +EA 
Sbjct: 322 CSPTVYTYNTILDGYCRANQLEEARKFMLEEM--DCPPNVVSFNIMIRGLCKVNRSSEAM 379

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-VRPNAFTYSTLMDG 130
            L  E   +   P VV +  ++D LC+  K+DEA R+   M++     PN+ TYSTL+ G
Sbjct: 380 ELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTG 439

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
            C  G ++RA    G +E  GC  +  +YN+LI+ + K    E+A  L  +MV +G
Sbjct: 440 LCNAGMLDRAR---GYIEK-GCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  239 bits (610), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 128/365 (35%), Positives = 206/365 (56%), Gaps = 1/365 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY+T+I   C+ G +  A   F QM    I P+   Y+SLIHG C   D  +AK 
Sbjct: 439 RPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKE 498

Query: 73  LFFEMMDQGV-QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
              EMM +G+ +P++V F+ I+  LC  G++ +A  + +L++    RP   T+++L+DG+
Sbjct: 499 FISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGY 558

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL GK+ +A  +  +M S+G + D V+ N L++GYCK+ ++++ L L+REM+ K +KPT 
Sbjct: 559 CLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTT 618

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN +  GL    +   A K+F EM     A D  TY   + GLC+N    EA+ LF  
Sbjct: 619 VTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHK 678

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           LG + C+ DI   N +I+ L K  R E A +LF ++    LV +V TY +MI  L  +G 
Sbjct: 679 LGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGS 738

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A  +F  ME++  AP+  +   +I   ++     K    + K+    +  +AS  S+
Sbjct: 739 VEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSL 798

Query: 372 VVDLL 376
           ++ L 
Sbjct: 799 LMSLF 803



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 185/358 (51%), Gaps = 1/358 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C P+ V++NT+I G  K+G V KA  LF +M  + + PDV TYNS++  LC A   +
Sbjct: 225 GGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMD 284

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A+ +  +M+D+GV+P  VT+N I+     +G   E++++   M  + + P+  T+S+ M
Sbjct: 285 KAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFM 344

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
              C  G+   AEE+F  M + G   D VSY+IL++GY       +  +L+  M  KGI 
Sbjct: 345 SSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIV 404

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
                 N L     +   ++ A+ +F EMQ   V  +  TY+T I   C+ G + +A+E 
Sbjct: 405 SNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEK 464

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL-VADVVTYNIMIHGLC 307
           F  +  +  E +   Y+ LI G C  G L  A E    +  + L   ++V ++ +IH LC
Sbjct: 465 FSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLC 524

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +G++  A D+F  +      P ++ F +LI G+  + K  K   +L  M    + PD
Sbjct: 525 IEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPD 582



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 182/366 (49%), Gaps = 4/366 (1%)

Query: 7   EIGVVCKPNTV-TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           E G    P TV TY  ++D  C+    D   A   ++    +    +   + +  LCHA 
Sbjct: 114 EAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAK 173

Query: 66  DWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR--PNAF 122
             +EA  +    M +    P  +++N ++  LC + +  EA  ++  M +   R  P+  
Sbjct: 174 RTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVV 233

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           +++T++ GF   G++++A  LF  M   G   D  +YN +++  CK + +++A  + R+M
Sbjct: 234 SFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQM 293

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
           V KG++P  VTYN +  G       + + K+F +M    +  DT T+++F+  LCK+G  
Sbjct: 294 VDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRS 353

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            +A E+F+ +       DI +Y+ L+ G    GR      LF S+  + +V++    NI+
Sbjct: 354 KDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINIL 413

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I      G MD+A  +F +M+   V PNV+ + TLI  F R+ + +  +E   +M    +
Sbjct: 414 ISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGI 473

Query: 363 MPDASI 368
            P+ ++
Sbjct: 474 EPNTAV 479



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 155/309 (50%), Gaps = 1/309 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN-PDVVTYNSLIHGLCHAND 66
           I +  +PNT  Y+++I G C  G + KAK    +M  + ++ P++V ++S+IH LC    
Sbjct: 469 ISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGR 528

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A+ +F  ++  G +P++VTFN ++D  C  GKM++A  +LD MV   + P+  T +T
Sbjct: 529 VMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNT 588

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ G+C +GKI+    LF  M     K   V+YNI+++G  +      A  ++ EM+  G
Sbjct: 589 LVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSG 648

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
               + TY  L  GL      + A+ LF ++   D   D +  NT I+ L K     EA 
Sbjct: 649 TAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEAN 708

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +LF  +       ++  Y  +I  L K G +E A  +F S+ +          N +I  L
Sbjct: 709 DLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRML 768

Query: 307 CNDGQMDKA 315
              G + KA
Sbjct: 769 LQKGDIVKA 777



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 3/216 (1%)

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK-LFEE 216
           +Y IL++  C+ +  +   +    ++  G+K   +   T    L    + + A+  L   
Sbjct: 126 TYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHR 185

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL--KCELDIQAYNCLIDGLCKS 274
           M       D  +YNT I  LC +    EA+++ + +     +C  D+ ++N +I G  K 
Sbjct: 186 MSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 245

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G +  A  LF  + ++ +V DV TYN ++  LC    MDKA  +   M +  V P+ + +
Sbjct: 246 GEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTY 305

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
             +IHG+       +  ++  KM  K ++PD    S
Sbjct: 306 NAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFS 341



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 53/125 (42%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CK +    NT+I+ L K    ++A  LF  +    + P+V TY  +I  L       EA 
Sbjct: 684 CKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEAD 743

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M   G  PS    N I+  L + G + +A   +  +    +   A T S LM  F
Sbjct: 744 TMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLF 803

Query: 132 CLTGK 136
              GK
Sbjct: 804 SSKGK 808


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 207/365 (56%), Gaps = 11/365 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N V Y+ I+D LCK+G   KA+ +F +M  + I P+V+TYN +I G C    W++A++
Sbjct: 77  KANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQ 136

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+++ + P VVTF+ +++   K GK+  A  L   M++R++ P   TYS+++DGFC
Sbjct: 137 LLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFC 196

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE-----------VEEALSLYRE 181
              ++  A+ +F  M S GC  D ++ N LI+G C+ K            V  A  L++E
Sbjct: 197 KHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQE 256

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M+S G+ P +VT NTL  GL E  ++E AL++F+  Q+  +  DT+T N  I+G+CK   
Sbjct: 257 MISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNK 316

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           + EA +LF +L +   E D+  YN LI    K G    A +++  +  + ++   VTYN 
Sbjct: 317 VDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNS 376

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           M+ G C   ++++A  +   M     +P+V+ F TLI G+ +  +    +EL  +M ++ 
Sbjct: 377 MVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRG 436

Query: 362 VMPDA 366
           ++ D 
Sbjct: 437 LVADT 441



 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 120/372 (32%), Positives = 213/372 (57%), Gaps = 11/372 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTY TI++G+CK G    A  +  +M    I  +VV Y++++  LC   +  +A+ 
Sbjct: 42  QPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQN 101

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM ++G+ P+V+T+N ++D  C  GK  +A +LL  M++R++ P+  T+S L++ F 
Sbjct: 102 IFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFV 161

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK++ AEEL+  M         ++Y+ +I+G+CK+  +E+A  ++  MVSKG  P ++
Sbjct: 162 KEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDII 221

Query: 193 TYNTLF-----------LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           T NTL             G  ++  V  A  LF+EM  + V+ D  T NT + GLC+NG 
Sbjct: 222 TLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGK 281

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           + +A+E+F+     K +LD    N +I+G+CK  +++ A +LF SLP   +  DVVTYNI
Sbjct: 282 LEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNI 341

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +I     +G   +A D++L+M    + P+ + + +++ GF + N+  +  +++  M  + 
Sbjct: 342 LIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEG 401

Query: 362 VMPDASIVSMVV 373
             PD    S ++
Sbjct: 402 CSPDVVTFSTLI 413



 Score =  217 bits (552), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 122/393 (31%), Positives = 201/393 (51%), Gaps = 46/393 (11%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +TYN +IDG C  G    A+ L   M   NI+PDVVT+++LI+        + A+ L
Sbjct: 113 PNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEEL 172

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG--- 130
           + EM+ + + P+ +T++ ++D  CK+ ++++A  + DLMV +   P+  T +TL+DG   
Sbjct: 173 YREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCR 232

Query: 131 --------FCLTGKINRAEELFGSMESMG---------------CKH------------- 154
                   FC  G +N A++LF  M S G               C++             
Sbjct: 233 AKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVF 292

Query: 155 -------DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
                  D  + NI+ING CK  +V+EA  L+  +   G++  VVTYN L     +    
Sbjct: 293 QKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNF 352

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
             A  ++ EM    +   T TYN+ +DG CK   + EA ++  ++    C  D+  ++ L
Sbjct: 353 LRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTL 412

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           I G CK+GR++  LELF  + +R LVAD +TYN +IHG C  G ++ A D+F +M  + V
Sbjct: 413 IKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGV 472

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            P+ I F +++ G     +  K + +L  +++ 
Sbjct: 473 CPDTITFRSMLAGLCTKAELQKGLTMLEDLQKS 505



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 157/309 (50%), Gaps = 11/309 (3%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M++ G   +VVTF  +M+ LC+ G++ +A  L+D MV+   +P+A TY T+++G C  G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
              A  +   M+    K + V Y+ +++  CK+    +A +++ EM  KGI P V+TYN 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  G     +   A +L  +M   ++  D  T++  I+   K G +  A EL+R +    
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI-----------MIHG 305
                  Y+ +IDG CK  RLE A  +F  +  +    D++T N            +IHG
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            C  G ++ A DLF +M  N V+P+++   TL+ G     K  K +E+    ++ K+  D
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 366 ASIVSMVVD 374
            +  +++++
Sbjct: 301 TATCNIIIN 309



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 57/99 (57%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT++T+I G CK G VD    LF +M    +  D +TYN+LIHG C   D N A+
Sbjct: 402 CSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQ 461

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD 110
            +F EM+  GV P  +TF  ++  LC   ++ +   +L+
Sbjct: 462 DIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLE 500



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 47/83 (56%)

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
           A+VVT+  +++GLC +G++ +A  L   M E    P+ + + T+++G  ++      + +
Sbjct: 8   ANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNM 67

Query: 354 LHKMKEKKVMPDASIVSMVVDLL 376
           L KM E ++  +  I S +VD L
Sbjct: 68  LRKMDESQIKANVVIYSAIVDRL 90


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 123/372 (33%), Positives = 203/372 (54%), Gaps = 7/372 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TY ++I GLCK G +D+A  L  +M+   I P V  +N +I GLC A  + +A 
Sbjct: 26  CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDAL 85

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM-VQRDVRPNAFTYSTLMDG 130
             F  +      P ++TFN+++D L K+G+++EA ++ + M       PN  TY+T+++G
Sbjct: 86  GYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVING 145

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  GK++RA EL   M   GC  + ++Y++L+ G CK    ++  +L +EM  +G +P 
Sbjct: 146 LCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPD 205

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V+ YNTL  GL +  +++ AL+L + M R        TYN+ ++  C++  +  A  L +
Sbjct: 206 VIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQ 265

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C  D+  YN +I GLC+  RL+ A  L + +     V DV+TY+ +I GLC D 
Sbjct: 266 VMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDW 325

Query: 311 QMD------KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           ++D       A ++   M++    PN   +  +I G  R  K  + + LL +M + +V+P
Sbjct: 326 RVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385

Query: 365 DASIVSMVVDLL 376
           D S  SMV+  L
Sbjct: 386 DLSSFSMVIGSL 397



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 201/362 (55%), Gaps = 7/362 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY T+I+GLCK+G +D+A  L   M      P+V+TY+ L+ GLC A   ++  
Sbjct: 132 CLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGF 191

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM  +G QP V+ +N +++ LCK+ ++DEA  L+ LM++    P   TY++LM+ F
Sbjct: 192 TLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELF 251

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C + +++RA  L   M   GC  D ++YN +I G C++  +++A +L ++MV+    P V
Sbjct: 252 CRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDV 311

Query: 192 VTYNTLFLGLFEIHQV------EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           +TY+T+  GL +  +V      E A ++ E M++     +  TY   I+GLC+     +A
Sbjct: 312 ITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQA 371

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           + L R +   +   D+ +++ +I  LCKS  L+ A ++F  +  R    + V Y  +I G
Sbjct: 372 LALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDG 431

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           L   G++DKA  +F  M E +  P V  + +++ G   + +  + + ++  M  K+  PD
Sbjct: 432 LSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPD 490

Query: 366 AS 367
            +
Sbjct: 491 GA 492



 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 197/375 (52%), Gaps = 8/375 (2%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDW 67
           G  C P+ +T+N ++D L K G V++A  +F  M       P+VVTY ++I+GLC     
Sbjct: 93  GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKL 152

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           + A  L   M + G  P+V+T++V+++ LCK G+ D+   LL  M +R  +P+   Y+TL
Sbjct: 153 DRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++G C + +++ A EL   M   GC    V+YN L+  +C++K+V+ A  L + M  +G 
Sbjct: 213 LNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGC 272

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI----- 242
            P V+ YNT+  GL    +++ A  L ++M       D  TY+T IDGLCK+  +     
Sbjct: 273 PPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWK 332

Query: 243 -VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
              A E+   +    C  +   Y  +I+GLC++ + + AL L R +    +V D+ ++++
Sbjct: 333 LEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSM 392

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +I  LC    +D A+ +F  M E    PN + +  LI G  +  +  K + +   M E  
Sbjct: 393 VIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-S 451

Query: 362 VMPDASIVSMVVDLL 376
             P  +  + V+D L
Sbjct: 452 FRPGVATYNSVLDGL 466



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 192/389 (49%), Gaps = 42/389 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN +TY+ +++GLCK G  DK   L  +M      PDV+ YN+L++GLC +   +EA 
Sbjct: 167 CCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEAL 226

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR---------------- 115
            L   M+  G  P+VVT+N +M+  C++ ++D A RL+ +M +R                
Sbjct: 227 ELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGL 286

Query: 116 --DVR-----------------PNAFTYSTLMDGFC------LTGKINRAEELFGSMESM 150
             D R                 P+  TYST++DG C         K+  A E+   M+  
Sbjct: 287 CRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQT 346

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           GC  +  +Y ++I G C+ ++ ++AL+L R M+   + P + +++ +   L + H ++ A
Sbjct: 347 GCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAA 406

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
            K+F  M   +   +   Y   IDGL K G + +AV +F  + +      +  YN ++DG
Sbjct: 407 YKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM-VESFRPGVATYNSVLDG 465

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LC  GR+E A+ +   +  +    D  +Y  +I GLC    +++A++LF  +E    A  
Sbjct: 466 LCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAME 525

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           V ++  L++   +  + S    + +K+ E
Sbjct: 526 VGVYNVLVNELCKKKRLSDAHGVANKLIE 554



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 98/175 (56%), Gaps = 1/175 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +++ +I  LCK   +D A  +F  M      P+ V Y +LI GL    + ++A R+
Sbjct: 385 PDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRV 444

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E+M +  +P V T+N ++D LC  G+++EA R+++ M+ ++  P+  +Y  L+ G C 
Sbjct: 445 F-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCR 503

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
              +  A ELF ++E+ G   +   YN+L+N  CK K + +A  +  +++  G K
Sbjct: 504 VSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/70 (27%), Positives = 38/70 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  +Y  +I GLC+   V++A  LF  ++ +    +V  YN L++ LC     ++A 
Sbjct: 487 CFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAH 546

Query: 72  RLFFEMMDQG 81
            +  ++++ G
Sbjct: 547 GVANKLIEAG 556


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 122/318 (38%), Positives = 190/318 (59%), Gaps = 3/318 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CK + V YNTIIDG CK G V+ A  LF +M+ + +  D VTYNSL+ GLC +   ++A 
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL  +M+ + + P+V+TF  +++   + GK  EA +  + M++R + P+ FTY++++ G 
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C+ G+++ A+++   M + GC  D V+YN LING+CK K V+E   L REM  +G+    
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDT 349

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NT+  G F+  + + A ++F  M       +  TY+  + GLC N  + +A+ LF +
Sbjct: 350 VTFNTIIQGYFQAGRPDAAQEIFSRMGS---RPNIRTYSILLYGLCYNWRVEKALVLFES 406

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   + ELDI  YN +I G+C  G +E A +LF SL  + L  DVVTY  MI G C    
Sbjct: 407 MQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRL 466

Query: 312 MDKAHDLFLDMEENAVAP 329
            DKA  L+  M+E+ + P
Sbjct: 467 WDKADFLYRKMQEDGLLP 484



 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/352 (35%), Positives = 194/352 (55%), Gaps = 3/352 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT +++I+G C+   V  A  L  +M+      DVV YN++I G C     N A  
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALV 195

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M   GV+   VT+N ++  LC +G+  +A+RL+  MV RD+ PN  T++ L++ F 
Sbjct: 196 LFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFV 255

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK   A++ +  M       D  +YN +I+G C + +V+EA  +   MV+KG  P VV
Sbjct: 256 REGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVV 315

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  +  +V+   KL  EM +  +  DT T+NT I G  + G    A E+F  +
Sbjct: 316 TYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM 375

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           G      +I+ Y+ L+ GLC + R+E AL LF S+ +  +  D+ TYNI+IHG+C  G +
Sbjct: 376 G---SRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNV 432

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           + A DLF  +    + P+V+ + T+I GF R     K   L  KM+E  ++P
Sbjct: 433 EDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 188/360 (52%), Gaps = 3/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V ++ ++  + K    D   +LF  M+   I  D+ TYN +I+ LC  + +  A  +
Sbjct: 67  PSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSV 126

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +MM  G +P VVT + +++  C+  ++  A  L+  M +   + +   Y+T++DGFC 
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCK 186

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG +N A  LFG ME  G + D V+YN L+ G C +    +A  L R+MV + I P V+T
Sbjct: 187 TGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVIT 246

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L        +   A K +EEM R  +  D  TYN+ I GLC +G + EA ++   + 
Sbjct: 247 FTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMV 306

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D+  YN LI+G CK+ R++   +L R + +R LV D VT+N +I G    G+ D
Sbjct: 307 TKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPD 366

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A ++F  M      PN+  +  L++G     +  K + L   M++ ++  D +  ++V+
Sbjct: 367 AAQEIFSRMGSR---PNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVI 423



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 174/339 (51%), Gaps = 2/339 (0%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D+A  LF  M      P +V ++ L+  +  + +++    LF  M   G+   + T+N+
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++ LC+  +   A  ++  M++    P+  T S+L++GFC   ++  A +L   ME M 
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
           CK D V YN +I+G+CK   V  AL L+  M   G++   VTYN+L  GL    +   A 
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC-ELDIQAYNCLIDG 270
           +L  +M   D+  +  T+   I+   + G  +EA + +  + I +C + D+  YN +I G
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEM-IRRCIDPDVFTYNSMIHG 288

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LC  G+++ A ++   +  +    DVVTYN +I+G C   ++D+   L  +M +  +  +
Sbjct: 289 LCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVD 348

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            + F T+I G+ +  +P    E+  +M  +  +   SI+
Sbjct: 349 TVTFNTIIQGYFQAGRPDAAQEIFSRMGSRPNIRTYSIL 387



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 156/306 (50%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +EA  LF  M+     PS+V F+ ++  + K+   D    L   M    +  + +TY+ +
Sbjct: 51  DEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIV 110

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++  C   +   A  + G M   G + D V+ + LING+C+   V  A+ L  +M     
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRC 170

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           K  VV YNT+  G  +   V +AL LF  M+RD V ADT TYN+ + GLC +G   +A  
Sbjct: 171 KLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAAR 230

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L R + +     ++  +  LI+   + G+   A + +  + RR +  DV TYN MIHGLC
Sbjct: 231 LMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLC 290

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             GQ+D+A  +   M      P+V+ + TLI+GF +  +  +  +L+ +M ++ ++ D  
Sbjct: 291 MHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTV 350

Query: 368 IVSMVV 373
             + ++
Sbjct: 351 TFNTII 356


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 128/362 (35%), Positives = 203/362 (56%), Gaps = 5/362 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  +IDGLCK G VD+A AL  +M+ + + P  VTYNSLI GLC A   +EA  L
Sbjct: 79  PNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDL 137

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+  G  P + T+  ++   CK+ K D+A R+ + +V R  RP+  TYS L+DG C 
Sbjct: 138 LEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCK 197

Query: 134 TGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            G++  A +LFG M +S  C  + V+YN LI+G+C+  +++EA++L   M   G  P VV
Sbjct: 198 EGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVV 257

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  G  ++ +++ A  L  +M R  +  D  T+ + +DGLC+   + +AV +   +
Sbjct: 258 TYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEM 317

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C   +  YN ++DG C++ +LE A +    L       +VV++NIMI GLC   + 
Sbjct: 318 RRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRS 375

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM-KEKKVMPDASIVSM 371
            +A +L  +       P+V+++ T+I G  R  K  +   +  KM +E   +P++   S 
Sbjct: 376 SEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYST 435

Query: 372 VV 373
           ++
Sbjct: 436 LI 437



 Score =  234 bits (596), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 216/399 (54%), Gaps = 35/399 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  + VTY ++I GLCK   +++A     +M  +  +PDV TY ++IH LC  N  +EA+
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +   EM ++ + P+VVT+ V++D LCK G++DEA  LL  M ++ V P A TY++L+ G 
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGL 125

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   + + A +L   M   GC  D  +Y  LI G+CK+K+ ++AL ++ ++V++G +P V
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VTY+ L  GL +  +++ A+ LF  M +      +T TYN+ I G C+ G + EA+ L  
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +       D+  Y  L++G CK  RL+ A +L   + R+ L  DVVT+  ++ GLC + 
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 311 QMDKA------------------HDLFLD---------------MEENAVAPNVIIFVTL 337
           ++  A                  ++  LD               +EE    PNV+ F  +
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIM 365

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           I G  ++N+ S+ +EL+ + + ++  PD  + + V+D L
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 124/352 (35%), Positives = 183/352 (51%), Gaps = 10/352 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TY T+I G CK    D A  +F Q+      PDVVTY+ LI GLC      EA 
Sbjct: 146 CIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAI 205

Query: 72  RLFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            LF  M+  G   P+ VT+N ++   C+ GKMDEA  LL+ M +    P+  TY+TLM+G
Sbjct: 206 DLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNG 265

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC   +++ A +L   M   G   D V++  L++G C+   + +A+ +  EM  K   PT
Sbjct: 266 FCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPT 325

Query: 191 VVTYNTLFLGLFEIHQVEHALK-LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           V TYNT+  G    +Q+E A K + EEM   D   +  ++N  I GLCK     EA+EL 
Sbjct: 326 VYTYNTILDGYCRANQLEEARKFMLEEM---DCPPNVVSFNIMIRGLCKVNRSSEAMELV 382

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS-LPRRVLVADVVTYNIMIHGLCN 308
                 +C  D+  Y  +IDGLC+  +++ A  ++R  L     + + +TY+ +I GLCN
Sbjct: 383 EEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCN 442

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            G +D+A        E    PN+  +  LI  F + N+     ELL  M ++
Sbjct: 443 AGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQR 490



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 99/176 (56%), Gaps = 7/176 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P   TYNTI+DG C+   +++A+   L+    +  P+VV++N +I GLC  N  +EA 
Sbjct: 322 CSPTVYTYNTILDGYCRANQLEEARKFMLEEM--DCPPNVVSFNIMIRGLCKVNRSSEAM 379

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-VRPNAFTYSTLMDG 130
            L  E   +   P VV +  ++D LC+  K+DEA R+   M++     PN+ TYSTL+ G
Sbjct: 380 ELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITG 439

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
            C  G ++RA    G +E  GC  +  +YN+LI+ + K    E+A  L  +MV +G
Sbjct: 440 LCNAGMLDRAR---GYIEK-GCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 123/372 (33%), Positives = 203/372 (54%), Gaps = 7/372 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TY ++I GLCK G +D+A  L  +M+   I P V  +N +I GLC A  + +A 
Sbjct: 26  CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDAL 85

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM-VQRDVRPNAFTYSTLMDG 130
             F  +      P ++TFN+++D L K+G+++EA ++ + M       PN  TY+T+++G
Sbjct: 86  GYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVING 145

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  GK++RA EL   M   GC  + ++Y++L+ G CK    ++  +L +EM  +G +P 
Sbjct: 146 LCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPD 205

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V+ YNTL  GL +  +++ AL+L + M R        TYN+ ++  C++  +  A  L +
Sbjct: 206 VIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQ 265

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C  D+  YN +I GLC+  RL+ A  L + +     V DV+TY+ +I GLC D 
Sbjct: 266 VMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDW 325

Query: 311 QMD------KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           ++D       A ++   M++    PN   +  +I G  R  K  + + LL +M + +V+P
Sbjct: 326 RVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385

Query: 365 DASIVSMVVDLL 376
           D S  SMV+  L
Sbjct: 386 DLSSFSMVIGSL 397



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 201/362 (55%), Gaps = 7/362 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY T+I+GLCK+G +D+A  L   M      P+V+TY+ L+ GLC A   ++  
Sbjct: 132 CLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGF 191

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM  +G QP V+ +N +++ LCK+ ++DEA  L+ LM++    P   TY++LM+ F
Sbjct: 192 TLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELF 251

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C + +++RA  L   M   GC  D ++YN +I G C++  +++A +L ++MV+    P V
Sbjct: 252 CRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDV 311

Query: 192 VTYNTLFLGLFEIHQV------EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           +TY+T+  GL +  +V      E A ++ E M++     +  TY   I+GLC+     +A
Sbjct: 312 ITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQA 371

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           + L R +   +   D+ +++ +I  LCKS  L+ A ++F  +  R    + V Y  +I G
Sbjct: 372 LALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDG 431

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           L   G++DKA  +F  M E +  P V  + +++ G   + +  + + ++  M  K+  PD
Sbjct: 432 LSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPD 490

Query: 366 AS 367
            +
Sbjct: 491 GA 492



 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 197/375 (52%), Gaps = 8/375 (2%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDW 67
           G  C P+ +T+N ++D L K G V++A  +F  M       P+VVTY ++I+GLC     
Sbjct: 93  GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKL 152

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           + A  L   M + G  P+V+T++V+++ LCK G+ D+   LL  M +R  +P+   Y+TL
Sbjct: 153 DRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++G C + +++ A EL   M   GC    V+YN L+  +C++K+V+ A  L + M  +G 
Sbjct: 213 LNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGC 272

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI----- 242
            P V+ YNT+  GL    +++ A  L ++M       D  TY+T IDGLCK+  +     
Sbjct: 273 PPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWK 332

Query: 243 -VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
              A E+   +    C  +   Y  +I+GLC++ + + AL L R +    +V D+ ++++
Sbjct: 333 LEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSM 392

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +I  LC    +D A+ +F  M E    PN + +  LI G  +  +  K + +   M E  
Sbjct: 393 VIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-S 451

Query: 362 VMPDASIVSMVVDLL 376
             P  +  + V+D L
Sbjct: 452 FRPGVATYNSVLDGL 466



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 192/389 (49%), Gaps = 42/389 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN +TY+ +++GLCK G  DK   L  +M      PDV+ YN+L++GLC +   +EA 
Sbjct: 167 CCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEAL 226

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR---------------- 115
            L   M+  G  P+VVT+N +M+  C++ ++D A RL+ +M +R                
Sbjct: 227 ELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGL 286

Query: 116 --DVR-----------------PNAFTYSTLMDGFC------LTGKINRAEELFGSMESM 150
             D R                 P+  TYST++DG C         K+  A E+   M+  
Sbjct: 287 CRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQT 346

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           GC  +  +Y ++I G C+ ++ ++AL+L R M+   + P + +++ +   L + H ++ A
Sbjct: 347 GCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAA 406

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
            K+F  M   +   +   Y   IDGL K G + +AV +F  + +      +  YN ++DG
Sbjct: 407 YKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM-VESFRPGVATYNSVLDG 465

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LC  GR+E A+ +   +  +    D  +Y  +I GLC    +++A++LF  +E    A  
Sbjct: 466 LCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAME 525

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           V ++  L++   +  + S    + +K+ E
Sbjct: 526 VGVYNVLVNELCKKKRLSDAHGVANKLIE 554



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 98/175 (56%), Gaps = 1/175 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +++ +I  LCK   +D A  +F  M      P+ V Y +LI GL    + ++A R+
Sbjct: 385 PDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRV 444

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E+M +  +P V T+N ++D LC  G+++EA R+++ M+ ++  P+  +Y  L+ G C 
Sbjct: 445 F-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCR 503

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
              +  A ELF ++E+ G   +   YN+L+N  CK K + +A  +  +++  G K
Sbjct: 504 VSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/72 (26%), Positives = 39/72 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  +Y  +I GLC+   V++A  LF  ++ +    +V  YN L++ LC     ++A 
Sbjct: 487 CFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAH 546

Query: 72  RLFFEMMDQGVQ 83
            +  ++++ G +
Sbjct: 547 GVANKLIEAGYK 558


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  238 bits (608), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/349 (37%), Positives = 200/349 (57%), Gaps = 14/349 (4%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G++ +PN V Y+TII  LCK+  V  A  L+ QM  + I+PDV+TYN+L++G        
Sbjct: 112 GLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLK 171

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  LF +M+ + ++P + TFN+++D LCK G+M +A  +L +M+++ V P+  TY++LM
Sbjct: 172 EAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLM 231

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+ L  + N+A  +F +M   G   D  SY+++ING CK K V+EA++L +EM SK + 
Sbjct: 232 DGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMA 291

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  VTY++L  GL +  ++  A  L  EM      AD  TYN+ +D LCKN  + +A+ L
Sbjct: 292 PNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITL 351

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +     + DI  Y  L+DGLCK+GRL+ A E+++ L              +I G   
Sbjct: 352 LTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQIL--------------LIKGYHL 397

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           D   DKA  L   ME+N   PN + F  LI      +   K +ELL +M
Sbjct: 398 DSLFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREM 446



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 175/337 (51%), Gaps = 6/337 (1%)

Query: 46  NINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD------ELCKN 99
           N  P +  +  +   L   N ++    L  +M  +G+Q  +V  N++++      ++C N
Sbjct: 3   NPTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLN 62

Query: 100 GKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
            K+ E     D ++ +  + N  +Y TL+DG C  G+   A ++  +++ +  + + V Y
Sbjct: 63  DKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMY 122

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           + +I   CK+K V +A  LY +M+ K I P V+TYNTL  G   + +++ A+ LF +M  
Sbjct: 123 STIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLL 182

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
            ++  D  T+N  +DGLCK G + +A  +   +     + D+  YN L+DG     +   
Sbjct: 183 KNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENK 242

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A  +F ++ RR +  DV +Y++MI+GLC    +D+A +L  +M   ++APN + + +LI 
Sbjct: 243 ATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLID 302

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           G  +  +     +L+++M  +    D    + ++D L
Sbjct: 303 GLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDAL 339



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 109/195 (55%), Gaps = 21/195 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +Y+ +I+GLCK   VD+A  L  +M  +++ P+ VTY+SLI GL  +    +A  L
Sbjct: 257 PDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDL 316

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM ++G    V+T+N ++D LCKN ++D+A  LL  +  + ++P+ +TY+ L+DG C 
Sbjct: 317 VNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCK 376

Query: 134 TGKINRAEE---------------------LFGSMESMGCKHDDVSYNILINGYCKNKEV 172
            G++  A+E                     L   ME  GC  + V++ ILI    +N   
Sbjct: 377 NGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMN 436

Query: 173 EEALSLYREMVSKGI 187
           ++A+ L REM+++G+
Sbjct: 437 DKAVELLREMIARGL 451


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  238 bits (608), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 126/321 (39%), Positives = 189/321 (58%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            PN V YNT+I+GLCK   ++ A  +F  M+ + I  D VTYN+LI GL ++  W +A RL
Sbjct: 707  PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 766

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              +M+ + + P+V+ F  ++D   K G + EA  L   M++R V PN FTY++L++GFC+
Sbjct: 767  LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 826

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             G +  A+ +F  M S GC  D V+YN LI G+CK+K VE+ + L+ EM  +G+     T
Sbjct: 827  HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 886

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            YNTL  G  +  ++  A K+F  M    V+ D  TYN  +D LC NG I +A+ +   L 
Sbjct: 887  YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 946

Query: 254  ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              + ++DI  YN +I GLC++ +L+ A  LFRSL R+ +  D + Y  MI GLC  G   
Sbjct: 947  KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 1006

Query: 314  KAHDLFLDMEENAVAPNVIIF 334
            +A  L   M+E+   P+  I+
Sbjct: 1007 EADKLCRRMKEDGFMPSERIY 1027



 Score =  237 bits (605), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 123/315 (39%), Positives = 187/315 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V YNT+IDGLCK G ++ A  L  +M+ + +  DVVTYN+L+ GLC++  W++A R
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +MM + + P VVTF  ++D   K G +DEA  L   M+Q  V PN  TY+++++G C
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + G++  A++ F  M S GC  + V+YN LI+G+CK + V+E + L++ M  +G    + 
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  ++ ++  AL +F  M    V  D  T+   + GLC NG I  A+  F  +
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +  + I AYN +I GLCK+ ++E A ELF  LP   +  D  TY IMI GLC +G  
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472

Query: 313 DKAHDLFLDMEENAV 327
            +A +L   M+E  +
Sbjct: 473 READELIRRMKEEGI 487



 Score =  227 bits (579), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 124/356 (34%), Positives = 194/356 (54%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            +P+ VT  ++++G C+     +A +L   M G    P+VV YN++I+GLC   D N A  
Sbjct: 671  RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 730

Query: 73   LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            +F+ M  +G++   VT+N ++  L  +G+  +A+RLL  MV+R + PN   ++ L+D F 
Sbjct: 731  VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 790

Query: 133  LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              G +  A  L+  M       +  +YN LING+C +  + +A  ++  MVSKG  P VV
Sbjct: 791  KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 850

Query: 193  TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            TYNTL  G  +  +VE  +KLF EM    +  D  TYNT I G C+ G +  A ++F  +
Sbjct: 851  TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 910

Query: 253  GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   DI  YN L+D LC +G++E AL +   L +  +  D++TYNI+I GLC   ++
Sbjct: 911  VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKL 970

Query: 313  DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
             +A  LF  +    V P+ I ++T+I G  R     +  +L  +MKE   MP   I
Sbjct: 971  KEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 1026



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 118/351 (33%), Positives = 192/351 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT+ +++ G C    +  A +L + M      P+VV YN+LI GLC   + N A  
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  +G+   VVT+N ++  LC +G+  +A+R+L  M++R + P+  T++ L+D F 
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV 257

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A+EL+  M       ++V+YN +ING C +  + +A   +  M SKG  P VV
Sbjct: 258 KQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVV 317

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  +   V+  +KLF+ M  +   AD  TYNT I G C+ G +  A+++F  +
Sbjct: 318 TYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWM 377

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   DI  +  L+ GLC +G +E AL  F  +        +V YNIMIHGLC   ++
Sbjct: 378 VSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKV 437

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           +KA +LF  +    V P+   +  +I G  +     +  EL+ +MKE+ ++
Sbjct: 438 EKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 193/356 (54%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++  +I   C+   +  A ++  +M      P +VT+ SL+HG C  N   +A  L   M
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +  G +P+VV +N ++D LCKNG+++ A  LL+ M ++ +  +  TY+TL+ G C +G+ 
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  +   M       D V++  LI+ + K   ++EA  LY+EM+   + P  VTYN++
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL    ++  A K F+ M       +  TYNT I G CK   + E ++LF+ +     
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             DI  YN LI G C+ G+L +AL++F  +  R +  D++T+ I++HGLC +G+++ A  
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            F DM E+     ++ +  +IHG  + +K  K  EL  ++  + V PDA   ++++
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 162/301 (53%)

Query: 41  QMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
           +M+   I+ D+ ++  LIH  C  +  + A  +  +MM  G +PS+VTF  ++   C   
Sbjct: 96  KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           ++ +A  L+ LMV+    PN   Y+TL+DG C  G++N A EL   ME  G   D V+YN
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            L+ G C +    +A  + R+M+ + I P VVT+  L     +   ++ A +L++EM + 
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            V  +  TYN+ I+GLC +G + +A + F  +    C  ++  YN LI G CK   ++  
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           ++LF+ +      AD+ TYN +IHG C  G++  A D+F  M    V P++I    L+HG
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395

Query: 341 F 341
            
Sbjct: 396 L 396



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 186/363 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +  ++  + K    D    L+ +M+   I+ D+ ++  LIH  C  +  + A  L
Sbjct: 602 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 661

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +MM  G +PS+VT   +++  C+  +  EA  L+D M      PN   Y+T+++G C 
Sbjct: 662 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 721

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +N A E+F  ME  G + D V+YN LI+G   +    +A  L R+MV + I P V+ 
Sbjct: 722 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 781

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L     +   +  A  L++EM R  V  +  TYN+ I+G C +G + +A  +F  + 
Sbjct: 782 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 841

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D+  YN LI G CKS R+E  ++LF  +  + LV D  TYN +IHG C  G+++
Sbjct: 842 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 901

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  +F  M +  V+P+++ +  L+       K  K + ++  +++ ++  D    ++++
Sbjct: 902 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 961

Query: 374 DLL 376
             L
Sbjct: 962 QGL 964



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 161/333 (48%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
           + A ALF +M      P +V +  L+    +   +        +M   G+   + +F ++
Sbjct: 53  EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           +   C+  ++  A  +L  M++    P+  T+ +L+ GFCL  +I  A  L   M   G 
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
           + + V YN LI+G CKN E+  AL L  EM  KG+   VVTYNTL  GL    +   A +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           +  +M +  +  D  T+   ID   K G + EA EL++ +     + +   YN +I+GLC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
             GRL  A + F  +  +    +VVTYN +I G C    +D+   LF  M       ++ 
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            + TLIHG+ ++ K    +++   M  ++V PD
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 157/313 (50%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           Y   +    H   +++A  LF EM+     PS+V F  ++  + K  K D    L   M 
Sbjct: 572 YRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKME 631

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
              +  + ++++ L+  FC   +++ A  L G M  +G +   V+   L+NG+C+    +
Sbjct: 632 NLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQ 691

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           EA+SL   M   G  P VV YNT+  GL +   + +AL++F  M++  + AD  TYNT I
Sbjct: 692 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 751

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
            GL  +G   +A  L R +   K + ++  +  LID   K G L  A  L++ + RR +V
Sbjct: 752 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 811

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            +V TYN +I+G C  G +  A  +F  M      P+V+ + TLI GF +  +    ++L
Sbjct: 812 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 871

Query: 354 LHKMKEKKVMPDA 366
             +M  + ++ DA
Sbjct: 872 FCEMTYQGLVGDA 884



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 122/238 (51%), Gaps = 4/238 (1%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            PN  TYN++I+G C  G +  AK +F  M  +   PDVVTYN+LI G C +    +  +L
Sbjct: 812  PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 871

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            F EM  QG+     T+N ++   C+ GK++ A ++ + MV   V P+  TY+ L+D  C 
Sbjct: 872  FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 931

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             GKI +A  +   ++      D ++YNI+I G C+  +++EA  L+R +  KG+KP  + 
Sbjct: 932  NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 991

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            Y T+  GL        A KL   M+ D        Y    D   ++ Y   + EL + 
Sbjct: 992  YITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY----DETLRDHYTSLSAELIKA 1045



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 107/184 (58%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            C P+ VTYNT+I G CK   V+    LF +M  + +  D  TYN+LIHG C A   N A+
Sbjct: 845  CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 904

Query: 72   RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            ++F  M+D GV P +VT+N+++D LC NGK+++A  +++ + + ++  +  TY+ ++ G 
Sbjct: 905  KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 964

Query: 132  CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            C T K+  A  LF S+   G K D ++Y  +I+G C+     EA  L R M   G  P+ 
Sbjct: 965  CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 1024

Query: 192  VTYN 195
              Y+
Sbjct: 1025 RIYD 1028



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 180/410 (43%), Gaps = 47/410 (11%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYNT+I G CK   VD+   LF +M  E  N D+ TYN+LIHG C       A 
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M+ + V P ++T  +++  LC NG+++ A    D M + +       Y+ ++ G 
Sbjct: 372 DIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI---- 187
           C   K+ +A ELF  +   G K D  +Y I+I G CKN    EA  L R M  +GI    
Sbjct: 432 CKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQM 491

Query: 188 -------KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI------- 233
                  +    +   + L L EI +   +   +  MQR    A +S+   F+       
Sbjct: 492 NAEDDHLEEHSSSNKEISLSLREIWERSKSNPFW--MQRLIPIAFSSSVKGFVRRHYLLL 549

Query: 234 --------------DGLCKNGYIVEAV--EL----FRTLGILKCEL-------DIQAYNC 266
                          G   + +  E +  EL    F     L CE+        I  +  
Sbjct: 550 ERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTR 609

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           ++  + K  + +I + L+  +    +  D+ ++ I+IH  C   ++  A  L   M +  
Sbjct: 610 VLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLG 669

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             P+++   +L++GF + N+  + + L+  M     +P+  I + V++ L
Sbjct: 670 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGL 719



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 139/317 (43%), Gaps = 70/317 (22%)

Query: 60  GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
           G  H+  + +A  LFFEM+     PS+V F                +RLL          
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDF----------------TRLLT------ATA 82

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           N   Y T++                  ME  G  HD  S+ ILI+ +C+   +  ALS+ 
Sbjct: 83  NLRRYETVI-------------YFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVL 129

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            +M+  G +P++VT+ +L  G   ++++  A  L   M                    K+
Sbjct: 130 GKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM-------------------VKS 170

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           GY                E ++  YN LIDGLCK+G L IALEL   + ++ L ADVVTY
Sbjct: 171 GY----------------EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           N ++ GLC  G+   A  +  DM + ++ P+V+ F  LI  FV+     +  EL  +M +
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274

Query: 360 KKVMPDASIVSMVVDLL 376
             V P+    + +++ L
Sbjct: 275 SSVDPNNVTYNSIINGL 291



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 100/215 (46%)

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L  G+  +   E+A +L+ EMV     P++V +  L      + + E  +   ++M+   
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           ++ D  ++   I   C+   +  A+ +   +  L  E  I  +  L+ G C   R+  A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            L   + +     +VV YN +I GLC +G+++ A +L  +ME+  +  +V+ + TL+ G 
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               + S    +L  M ++ + PD    + ++D+ 
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVF 256


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  238 bits (607), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 136/331 (41%), Positives = 198/331 (59%), Gaps = 1/331 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN + YN ++DGLCKEG V +A  L  +M G+ I  DV TYNSLIHG C A  +  A R
Sbjct: 193 RPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVR 252

Query: 73  LFFEM-MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           L  EM M + V+P V TFN+++D LCK G + EA  +  LM++R + P+  + + LM+G+
Sbjct: 253 LLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGW 312

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL G ++ A+E+F  M   G   + +SY+ LINGYCK K V+EAL L  EM  + + P  
Sbjct: 313 CLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDT 372

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN L  GL +  +V +   L E M+    A D  TYN  +D   K   + +A+ LF+ 
Sbjct: 373 VTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQH 432

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       +I+ YN LIDGLCK GR++ A E+F+ L  +    ++ TYNIMI+GL  +G 
Sbjct: 433 IVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGL 492

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           +D+A  L L+M ++   PN + F  L+   +
Sbjct: 493 LDEAEALLLEMVDDGFPPNAVTFDPLVRALL 523



 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 113/328 (34%), Positives = 179/328 (54%), Gaps = 1/328 (0%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V Y T+I+GLCK G    A  L  +M+   + P+++ YN ++ GLC      EA  L  E
Sbjct: 162 VCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSE 221

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR-DVRPNAFTYSTLMDGFCLTG 135
           M+ +G+   V T+N ++   C  G+   A RLL+ MV + DVRP+ +T++ L+D  C  G
Sbjct: 222 MVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLG 281

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
            +  A  +FG M   G + D VS N L+NG+C    + EA  ++  MV +G  P V++Y+
Sbjct: 282 MVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYS 341

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           TL  G  ++  V+ AL+L  EM + ++  DT TYN  +DGL K+G ++   +L   +   
Sbjct: 342 TLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRAS 401

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
               D+  YN L+D   K   L+ AL LF+ +    +  ++ TYNI+I GLC  G+M  A
Sbjct: 402 GQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAA 461

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            ++F  +      PN+  +  +I+G  R
Sbjct: 462 KEIFQLLSVKGCRPNIRTYNIMINGLRR 489



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 182/354 (51%), Gaps = 4/354 (1%)

Query: 26  LCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGV-QP 84
           L K    D A + F +M   +  P +V+ N L+  +     +     L   +  +G  +P
Sbjct: 30  LPKTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKP 89

Query: 85  SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELF 144
           S+VT ++ ++ L   G+M  A  ++  +V+R    + FT +TLM G CL G+   A  L+
Sbjct: 90  SLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLY 149

Query: 145 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 204
               S G   D+V Y  LING CK  +  +A+ L R+M   G++P ++ YN +  GL + 
Sbjct: 150 DHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKE 209

Query: 205 HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL--DIQ 262
             V  A  L  EM    +  D  TYN+ I G C  G    AV L   + ++K ++  D+ 
Sbjct: 210 GLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEM-VMKEDVRPDVY 268

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
            +N L+D LCK G +  A  +F  + +R L  DVV+ N +++G C  G M +A ++F  M
Sbjct: 269 TFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRM 328

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            E    PNVI + TLI+G+ ++    + + LL +M ++ ++PD    + ++D L
Sbjct: 329 VERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGL 382



 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 182/360 (50%), Gaps = 1/360 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T  T++ GLC +G   +A  L+     +  + D V Y +LI+GLC      +A  L  +M
Sbjct: 128 TLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKM 187

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
              GV+P+++ +N+++D LCK G + EA  L   MV + +  + FTY++L+ GFC  G+ 
Sbjct: 188 EKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQF 247

Query: 138 NRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
             A  L   M      + D  ++NIL++  CK   V EA +++  M+ +G++P VV+ N 
Sbjct: 248 QGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNA 307

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G      +  A ++F+ M       +  +Y+T I+G CK   + EA+ L   +    
Sbjct: 308 LMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRN 367

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              D   YNCL+DGL KSGR+    +L  ++       D++TYN+++        +DKA 
Sbjct: 368 LVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKAL 427

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            LF  + +  ++PN+  +  LI G  +  +     E+   +  K   P+    +++++ L
Sbjct: 428 ALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGL 487



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 178/365 (48%), Gaps = 1/365 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VT +  I+ L   G +  A ++  ++       D  T  +L+ GLC      EA  
Sbjct: 88  KPSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALN 147

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L+   + +G     V +  +++ LCK GK  +A  LL  M +  VRPN   Y+ ++DG C
Sbjct: 148 LYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLC 207

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTV 191
             G +  A  L   M   G   D  +YN LI+G+C   + + A+ L  EMV K  ++P V
Sbjct: 208 KEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDV 267

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+N L   L ++  V  A  +F  M +  +  D  + N  ++G C  G + EA E+F  
Sbjct: 268 YTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDR 327

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       ++ +Y+ LI+G CK   ++ AL L   + +R LV D VTYN ++ GL   G+
Sbjct: 328 MVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGR 387

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +    DL   M  +  AP++I +  L+  +++     K + L   + +  + P+    ++
Sbjct: 388 VLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNI 447

Query: 372 VVDLL 376
           ++D L
Sbjct: 448 LIDGL 452



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 106/190 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN ++Y+T+I+G CK   VD+A  L  +M   N+ PD VTYN L+ GL  +        L
Sbjct: 335 PNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDL 394

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   G  P ++T+NV++D+  K   +D+A  L   +V   + PN  TY+ L+DG C 
Sbjct: 395 VEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCK 454

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A+E+F  +   GC+ +  +YNI+ING  +   ++EA +L  EMV  G  P  VT
Sbjct: 455 GGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVT 514

Query: 194 YNTLFLGLFE 203
           ++ L   L E
Sbjct: 515 FDPLVRALLE 524



 Score = 38.9 bits (89), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 35/50 (70%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGL 61
           C+PN  TYN +I+GL +EG +D+A+AL L+M  +   P+ VT++ L+  L
Sbjct: 473 CRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRAL 522


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  238 bits (607), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 138/392 (35%), Positives = 200/392 (51%), Gaps = 33/392 (8%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T+N  I GLC+   +  A+ +F  M+     P+ +TYN+L+ GLC+    ++A+ L+  M
Sbjct: 52  TFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERM 111

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +  G  P VVT+N ++   CK GK+DEA ++ D  V+R   P+  TY+ L++GFC   K+
Sbjct: 112 IKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKL 171

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE----------------------- 174
           + A+ +   M S     D V+YN L+NG CKN  V+E                       
Sbjct: 172 DEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISG 231

Query: 175 ----------ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAA 224
                     A  L  +MV  G KP +V+YN L  GL     V  ALKLF  + R     
Sbjct: 232 LCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEP 291

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           +  TYN  IDGL K   + EA ELF  L     E D   Y   IDGLCK+GR+E AL + 
Sbjct: 292 EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLML 351

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
           + +  +  V DVV++N +I+GLC + ++D+A  L   ME    +PN I F TLI G  R 
Sbjct: 352 KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRA 411

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            K  K +    +M ++ V P     +++VD L
Sbjct: 412 GKWKKAMTTFKEMLKRGVKPTVVTYNILVDGL 443



 Score =  238 bits (606), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 132/368 (35%), Positives = 207/368 (56%), Gaps = 6/368 (1%)

Query: 14  PNTVTYNTIIDGLCKE-GFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           PN +TY+T+I GLC+E   ++ A+ L  +M      PD+V+YN+LIHGL      +EA +
Sbjct: 220 PNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALK 279

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  ++ QG +P V T+N+++D L K  +++EA  L   +V+  + P+A TY+  +DG C
Sbjct: 280 LFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLC 339

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A  +   M+  GC  D VS+N +ING CK K V+EA  L   M +KG  P  +
Sbjct: 340 KAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAI 399

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK---NGYIVEAVELF 249
           ++NTL  G     + + A+  F+EM +  V     TYN  +DGLCK    G I EA+ LF
Sbjct: 400 SFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLF 459

Query: 250 RTLGILKCEL-DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
             + I K  + D+  Y+ LIDGL K+G+L+ A  L  ++  +  + +V TYN +I GLC 
Sbjct: 460 DAM-IEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCG 518

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
             ++D+A +LF+ M E    P+ I + T+I    +     K + L     E  V+P + +
Sbjct: 519 LDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGM 578

Query: 369 VSMVVDLL 376
              ++D L
Sbjct: 579 YFSLIDGL 586



 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 120/347 (34%), Positives = 196/347 (56%), Gaps = 3/347 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+ V+YN +I GL +E  V +A  LF  +  +   P+V TYN LI GL   +  NEA 
Sbjct: 254 CKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAF 313

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  ++  G++P  +T+ V +D LCK G++++A  +L  M ++   P+  +++ +++G 
Sbjct: 314 ELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGL 373

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +++ AE L   ME+ GC  + +S+N LI G C+  + ++A++ ++EM+ +G+KPTV
Sbjct: 374 CKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTV 433

Query: 192 VTYNTLFLGLFEIHQ---VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           VTYN L  GL +  Q   ++ A+ LF+ M       D  TY+  IDGL K G + +A  L
Sbjct: 434 VTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRL 493

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +    C  ++  YN LI GLC   +++ ALELF ++  +  V D +TY  +I  LC 
Sbjct: 494 LGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCK 553

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
              +DKA  LF    E  V P   ++ +LI G   + +  + ++LL 
Sbjct: 554 QEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/367 (32%), Positives = 204/367 (55%), Gaps = 7/367 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA-NDWNEAKR 72
           P+ VTYN++++GLCK G VD+A+ L +    +  +P+V+TY++LI GLC        A++
Sbjct: 188 PDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQ 244

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+  G +P +V++N ++  L +   + EA +L   ++++   P   TY+ L+DG  
Sbjct: 245 LLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLL 304

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++N A ELF  +   G + D ++Y + I+G CK   VE+AL + ++M  KG  P VV
Sbjct: 305 KEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVV 364

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           ++N +  GL +  +V+ A  L   M+    + +  ++NT I G C+ G   +A+  F+ +
Sbjct: 365 SHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEM 424

Query: 253 GILKCELDIQAYNCLIDGLCKS---GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
                +  +  YN L+DGLCK+   GR++ A+ LF ++  +  V DVVTY+ +I GL   
Sbjct: 425 LKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKA 484

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++D A  L   ME     PNV  + +LI G   ++K  + +EL   M EK  +PD    
Sbjct: 485 GKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITY 544

Query: 370 SMVVDLL 376
             ++  L
Sbjct: 545 GTIISAL 551


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  238 bits (607), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 126/321 (39%), Positives = 189/321 (58%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V YNT+I+GLCK   ++ A  +F  M+ + I  D VTYN+LI GL ++  W +A RL
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+ + + P+V+ F  ++D   K G + EA  L   M++R V PN FTY++L++GFC+
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A+ +F  M S GC  D V+YN LI G+CK+K VE+ + L+ EM  +G+     T
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G  +  ++  A K+F  M    V+ D  TYN  +D LC NG I +A+ +   L 
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             + ++DI  YN +I GLC++ +L+ A  LFRSL R+ +  D + Y  MI GLC  G   
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 481

Query: 314 KAHDLFLDMEENAVAPNVIIF 334
           +A  L   M+E+   P+  I+
Sbjct: 482 EADKLCRRMKEDGFMPSERIY 502



 Score =  227 bits (578), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 124/356 (34%), Positives = 194/356 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT  ++++G C+     +A +L   M G    P+VV YN++I+GLC   D N A  
Sbjct: 146 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F+ M  +G++   VT+N ++  L  +G+  +A+RLL  MV+R + PN   ++ L+D F 
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 265

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  L+  M       +  +YN LING+C +  + +A  ++  MVSKG  P VV
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 325

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  +  +VE  +KLF EM    +  D  TYNT I G C+ G +  A ++F  +
Sbjct: 326 TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 385

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  DI  YN L+D LC +G++E AL +   L +  +  D++TYNI+I GLC   ++
Sbjct: 386 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKL 445

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            +A  LF  +    V P+ I ++T+I G  R     +  +L  +MKE   MP   I
Sbjct: 446 KEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 501



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 186/363 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +  ++  + K    D    L+ +M+   I+ D+ ++  LIH  C  +  + A  L
Sbjct: 77  PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +MM  G +PS+VT   +++  C+  +  EA  L+D M      PN   Y+T+++G C 
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +N A E+F  ME  G + D V+YN LI+G   +    +A  L R+MV + I P V+ 
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L     +   +  A  L++EM R  V  +  TYN+ I+G C +G + +A  +F  + 
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D+  YN LI G CKS R+E  ++LF  +  + LV D  TYN +IHG C  G+++
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  +F  M +  V+P+++ +  L+       K  K + ++  +++ ++  D    ++++
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436

Query: 374 DLL 376
             L
Sbjct: 437 QGL 439



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 155/304 (50%)

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
           H   +++A  LF EM+     PS+V F  ++  + K  K D    L   M    +  + +
Sbjct: 56  HCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLY 115

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           +++ L+  FC   +++ A  L G M  +G +   V+   L+NG+C+    +EA+SL   M
Sbjct: 116 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 175

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
              G  P VV YNT+  GL +   + +AL++F  M++  + AD  TYNT I GL  +G  
Sbjct: 176 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            +A  L R +   K + ++  +  LID   K G L  A  L++ + RR +V +V TYN +
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I+G C  G +  A  +F  M      P+V+ + TLI GF +  +    ++L  +M  + +
Sbjct: 296 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355

Query: 363 MPDA 366
           + DA
Sbjct: 356 VGDA 359



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 122/238 (51%), Gaps = 4/238 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN++I+G C  G +  AK +F  M  +   PDVVTYN+LI G C +    +  +L
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM  QG+     T+N ++   C+ GK++ A ++ + MV   V P+  TY+ L+D  C 
Sbjct: 347 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GKI +A  +   ++      D ++YNI+I G C+  +++EA  L+R +  KG+KP  + 
Sbjct: 407 NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 466

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           Y T+  GL        A KL   M+ D        Y    D   ++ Y   + EL + 
Sbjct: 467 YITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY----DETLRDHYTSLSAELIKA 520



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 107/184 (58%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYNT+I G CK   V+    LF +M  + +  D  TYN+LIHG C A   N A+
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++F  M+D GV P +VT+N+++D LC NGK+++A  +++ + + ++  +  TY+ ++ G 
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C T K+  A  LF S+   G K D ++Y  +I+G C+     EA  L R M   G  P+ 
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499

Query: 192 VTYN 195
             Y+
Sbjct: 500 RIYD 503


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 132/351 (37%), Positives = 200/351 (56%), Gaps = 2/351 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + N V+Y T+++GLCK G    A  L   ++  +  P+VV Y+++I GLC     NEA  
Sbjct: 112 QTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYD 171

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L+ EM  + + P+V+T+N ++   C  G++  A  LL  M+ +++ P+ +T+S L+D  C
Sbjct: 172 LYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALC 231

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK   A+++F +M  MG   +  SYNI+ING CK K V+EA++L REM+ K + P  V
Sbjct: 232 KEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTV 289

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  GL +  ++  AL L  EM      AD  TY + +D LCKN  + +A  LF  +
Sbjct: 290 TYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM 349

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +  +  Y  LIDGLCK GRL+ A ELF+ L  +    DV TY +MI GLC +G  
Sbjct: 350 KERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMF 409

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           D+A  +   ME+N   PN + F  +I      ++  K  +LLH+M  K ++
Sbjct: 410 DEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460



 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 182/358 (50%), Gaps = 2/358 (0%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           + +N I+  L K  +     +L  QM  + I  ++VT + LI+  CH      +  L  +
Sbjct: 11  IEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGK 70

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           ++  G  P+ +T+  +M  LC  G++ +     D +V +  + N  +Y TL++G C TG+
Sbjct: 71  ILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGE 130

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
              A +L   +E    + + V Y+ +I+G CK+K V EA  LY EM ++ I P V+TYNT
Sbjct: 131 TRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNT 190

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L        Q+  A  L  EM   ++  D  T++  ID LCK G    A ++F  +  + 
Sbjct: 191 LICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMG 248

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              ++ +YN +I+GLCK  R++ A+ L R +  + +V D VTYN +I GLC  G++  A 
Sbjct: 249 VNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSAL 308

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +L  +M       +V+ + +L+    +     K   L  KMKE+ + P     + ++D
Sbjct: 309 NLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALID 366



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 42/71 (59%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +  TY  +I GLCKEG  D+A A+  +M+     P+ VT+  +I  L   ++ ++A+
Sbjct: 389 CCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAE 448

Query: 72  RLFFEMMDQGV 82
           +L  EM+ +G+
Sbjct: 449 KLLHEMIAKGL 459


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 122/355 (34%), Positives = 188/355 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
            T++YN +++ L K G  D     +  M G    P+  TY  L+  LC A  + EA+ +F
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M  QG  P+V ++++++  LC+  K+DEA+ LL+ M+    +PN  TY +L+ G C  
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK+  A +LF  M   GC  D V YN+LI+G+ K  ++ EA  L+ EM+ KG  PTV TY
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N+L  G     +      LF++M R     +  T+N  +DG CK G +VEA  LF  +  
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L C  D+ +YN L+ G+C  G+   A  L R + R  +  D+V+YNI+I G    G +D 
Sbjct: 256 LGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           A  LF ++ ++ + P+   + T+I    R  K      +   M      PDA++V
Sbjct: 316 AIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVV 370



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/360 (34%), Positives = 192/360 (53%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N  +G  C PNT TY  ++  LC+    ++A+++F  M  +  +P+V +Y+ LI GLC  
Sbjct: 41  NDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRG 100

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
              +EA  L  EM+D G QP+VVT+  ++  LCK GK+ EA  L   MV R   P+   Y
Sbjct: 101 QKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVY 160

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + L+DGF   G +  A  LF  M   GC     +YN L++G+ +  E     SL+++M+ 
Sbjct: 161 NVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLR 220

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           +G  P + T+N L  G  ++  +  A +LF EM+      D  +YNT + G+C  G   E
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHE 280

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A  L R +       DI +YN LIDG  KSG L+ A++LF  +P+  L  D  +Y+ +I 
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            LC  G++  A  +F DM  N  AP+  + + L+ G  R  + ++  EL   M + + +P
Sbjct: 341 CLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVP 400



 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 193/365 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  +Y+ +I GLC+   VD+A  L  +M      P+VVTY SL+ GLC      EA 
Sbjct: 83  CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M+ +G  P  V +NV++D   K G M EA RL + M+++   P  FTY++L+ GF
Sbjct: 143 DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGF 202

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+  R + LF  M   GC  +  ++N L++G+CK  ++ EA  L+ EM S G  P V
Sbjct: 203 SRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDV 262

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+YNTL  G+    +   A +L  EM R  V  D  +YN  IDG  K+G +  A++LF  
Sbjct: 263 VSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYE 322

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     E D  +Y+ +ID LC++G++  A  +F+ +       D      ++ GLC   +
Sbjct: 323 IPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGER 382

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + ++ +LF  M +    P +  +  L++   +  +   V E+ H++ E+   PD  I  +
Sbjct: 383 LTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKV 442

Query: 372 VVDLL 376
           +++ L
Sbjct: 443 ILETL 447



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 167/340 (49%), Gaps = 2/340 (0%)

Query: 39  FLQMKGENI--NPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
           F Q  G  +  N   ++YN L+  L  +   +     + +M+  G  P+  T+  ++  L
Sbjct: 3   FFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSL 62

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           C+  + +EA  +   M  +   PN F+YS L+ G C   K++ A EL   M   G + + 
Sbjct: 63  CQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNV 122

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           V+Y  L++G CK  +++EA+ L+  MV +G  P  V YN L  G  +   +  A +LFEE
Sbjct: 123 VTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEE 182

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M          TYN+ + G  + G       LF+ +    C  +I  +N L+DG CK G 
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +  A  LF  +       DVV+YN ++ G+C+ G+  +A  L  +M  + V P+++ +  
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           LI G+ +       I+L +++ +  + PDA   S ++D L
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCL 342



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 138/269 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P   TYN+++ G  ++G   + ++LF  M  +   P++ T+N+L+ G C   D  EA 
Sbjct: 188 CIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAH 247

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RLF EM   G  P VV++N +M  +C  GK  EA RLL  M++  V P+  +Y+ L+DG+
Sbjct: 248 RLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGY 307

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
             +G ++ A +LF  +   G + D  SY+ +I+  C+  +V  A  ++++M++ G  P  
Sbjct: 308 SKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDA 367

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
                L +GL    ++  + +LF+ M + +       YN  +  LCK     +  E+F  
Sbjct: 368 AVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHE 427

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIA 280
           L       D++    +++ L +S   E A
Sbjct: 428 LTERGFSPDVEISKVILETLRRSDDKEAA 456


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 125/322 (38%), Positives = 188/322 (58%), Gaps = 8/322 (2%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + +PN V YNTIID +CK   V++A  L+ +M  E I+PDVVTY++LI G        
Sbjct: 171 GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLK 230

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  LF +M+ + ++P V TFN+++D  CK+GKM E   +  +M+++ ++PN  TY +LM
Sbjct: 231 DAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLM 290

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+CL  ++N+A  +F +M   G   D  SYNI+ING+CK K+V+EA++L+++M  K I 
Sbjct: 291 DGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNII 350

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTY +L  GL +  ++ +ALKL +EM    V  D  TY++ +D LCKN  + +A+ L
Sbjct: 351 PNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL 410

Query: 249 --------FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
                   F  L +    LD+ AY  +I G C  G    AL L   +     + D  TY 
Sbjct: 411 LTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYE 470

Query: 301 IMIHGLCNDGQMDKAHDLFLDM 322
           I+I  L    + D A  L  +M
Sbjct: 471 IIILSLFKKDENDMAEKLLREM 492



 Score =  203 bits (517), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 191/349 (54%), Gaps = 8/349 (2%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V+Y T+I+GLCK G    A  L  ++ G+ + P+VV YN++I  +C     NEA  L+ E
Sbjct: 144 VSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE 203

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+ +G+ P VVT++ ++      GK+ +A  L + M+  +++P+ +T++ L+DGFC  GK
Sbjct: 204 MVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 263

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +   + +F  M   G K + V+Y  L++GYC  K+V +A S++  M   G+ P   +YN 
Sbjct: 264 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNI 323

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  G  +I +V+ A+ LF++M   ++  +  TY + IDGLCK+G I  A++L   +    
Sbjct: 324 MINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRG 383

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV--------ADVVTYNIMIHGLCN 308
              DI  Y+ ++D LCK+ +++ A+ L   L  +V           DV  Y +MI G C 
Sbjct: 384 VPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCV 443

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            G  ++A  L   ME+N   P+   +  +I    + ++     +LL +M
Sbjct: 444 KGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREM 492



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 192/368 (52%), Gaps = 30/368 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +T  T+I GLC +                      V+Y +LI+GLC       A +L
Sbjct: 128 PNVITLTTLIKGLCLK----------------------VSYGTLINGLCKVGQARAALQL 165

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              +  + VQP+VV +N I+D +CK   ++EA  L   MV   + P+  TYS L+ GF +
Sbjct: 166 LRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFI 225

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A +LF  M     K D  ++NIL++G+CK+ +++E  +++  M+ +GIKP VVT
Sbjct: 226 VGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVT 285

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +L  G   + QV  A  +F  M +  V  DT +YN  I+G CK   + EA+ LF+ + 
Sbjct: 286 YCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMH 345

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 ++  Y  LIDGLCKSG++  AL+L   +  R +  D++TY+ ++  LC + Q+D
Sbjct: 346 CKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVD 405

Query: 314 KA--------HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           KA          +F D+       +V  +  +I GF      ++ + LL KM++   +PD
Sbjct: 406 KAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPD 465

Query: 366 ASIVSMVV 373
           A    +++
Sbjct: 466 AKTYEIII 473



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 180/345 (52%), Gaps = 13/345 (3%)

Query: 45  ENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDE 104
           +N  P +  +  ++  L   N ++ A  L  +M  +G+  ++VT N++++   + G+   
Sbjct: 54  KNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPL 113

Query: 105 ASRLLDLMVQRDVRPNAFT-------------YSTLMDGFCLTGKINRAEELFGSMESMG 151
           +  +   ++++   PN  T             Y TL++G C  G+   A +L   ++   
Sbjct: 114 SFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKL 173

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + + V YN +I+  CK K V EA  LY EMVS+GI P VVTY+ L  G F + +++ A+
Sbjct: 174 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAI 233

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            LF +M  +++  D  T+N  +DG CK+G + E   +F  +     + ++  Y  L+DG 
Sbjct: 234 DLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 293

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C   ++  A  +F ++ +  +  D  +YNIMI+G C   ++D+A +LF  M    + PNV
Sbjct: 294 CLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNV 353

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + + +LI G  +  K S  ++L+ +M ++ V PD    S ++D L
Sbjct: 354 VTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDAL 398



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 106/183 (57%), Gaps = 10/183 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T +YN +I+G CK   VD+A  LF +M  +NI P+VVTY SLI GLC +   + A +L
Sbjct: 316 PDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKL 375

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL---------DLMVQRDVRPNAFTY 124
             EM D+GV P ++T++ I+D LCKN ++D+A  LL         DL V +    + + Y
Sbjct: 376 VDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFV-KGYNLDVYAY 434

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + ++ GFC+ G  N A  L   ME  G   D  +Y I+I    K  E + A  L REM++
Sbjct: 435 TVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIA 494

Query: 185 KGI 187
           +G+
Sbjct: 495 RGL 497


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  237 bits (605), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 123/315 (39%), Positives = 187/315 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V YNT+IDGLCK G ++ A  L  +M+ + +  DVVTYN+L+ GLC++  W++A R
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +MM + + P VVTF  ++D   K G +DEA  L   M+Q  V PN  TY+++++G C
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + G++  A++ F  M S GC  + V+YN LI+G+CK + V+E + L++ M  +G    + 
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  ++ ++  AL +F  M    V  D  T+   + GLC NG I  A+  F  +
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +  + I AYN +I GLCK+ ++E A ELF  LP   +  D  TY IMI GLC +G  
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472

Query: 313 DKAHDLFLDMEENAV 327
            +A +L   M+E  +
Sbjct: 473 READELIRRMKEEGI 487



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 118/351 (33%), Positives = 192/351 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT+ +++ G C    +  A +L + M      P+VV YN+LI GLC   + N A  
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  +G+   VVT+N ++  LC +G+  +A+R+L  M++R + P+  T++ L+D F 
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV 257

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A+EL+  M       ++V+YN +ING C +  + +A   +  M SKG  P VV
Sbjct: 258 KQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVV 317

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  +   V+  +KLF+ M  +   AD  TYNT I G C+ G +  A+++F  +
Sbjct: 318 TYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWM 377

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   DI  +  L+ GLC +G +E AL  F  +        +V YNIMIHGLC   ++
Sbjct: 378 VSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKV 437

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           +KA +LF  +    V P+   +  +I G  +     +  EL+ +MKE+ ++
Sbjct: 438 EKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 193/356 (54%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++  +I   C+   +  A ++  +M      P +VT+ SL+HG C  N   +A  L   M
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +  G +P+VV +N ++D LCKNG+++ A  LL+ M ++ +  +  TY+TL+ G C +G+ 
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  +   M       D V++  LI+ + K   ++EA  LY+EM+   + P  VTYN++
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL    ++  A K F+ M       +  TYNT I G CK   + E ++LF+ +     
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             DI  YN LI G C+ G+L +AL++F  +  R +  D++T+ I++HGLC +G+++ A  
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            F DM E+     ++ +  +IHG  + +K  K  EL  ++  + V PDA   ++++
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 162/301 (53%)

Query: 41  QMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
           +M+   I+ D+ ++  LIH  C  +  + A  +  +MM  G +PS+VTF  ++   C   
Sbjct: 96  KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           ++ +A  L+ LMV+    PN   Y+TL+DG C  G++N A EL   ME  G   D V+YN
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            L+ G C +    +A  + R+M+ + I P VVT+  L     +   ++ A +L++EM + 
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            V  +  TYN+ I+GLC +G + +A + F  +    C  ++  YN LI G CK   ++  
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           ++LF+ +      AD+ TYN +IHG C  G++  A D+F  M    V P++I    L+HG
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395

Query: 341 F 341
            
Sbjct: 396 L 396



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 161/333 (48%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
           + A ALF +M      P +V +  L+    +   +        +M   G+   + +F ++
Sbjct: 53  EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           +   C+  ++  A  +L  M++    P+  T+ +L+ GFCL  +I  A  L   M   G 
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
           + + V YN LI+G CKN E+  AL L  EM  KG+   VVTYNTL  GL    +   A +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           +  +M +  +  D  T+   ID   K G + EA EL++ +     + +   YN +I+GLC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
             GRL  A + F  +  +    +VVTYN +I G C    +D+   LF  M       ++ 
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            + TLIHG+ ++ K    +++   M  ++V PD
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 93/176 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYNT+I G CK   VD+   LF +M  E  N D+ TYN+LIHG C       A 
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M+ + V P ++T  +++  LC NG+++ A    D M + +       Y+ ++ G 
Sbjct: 372 DIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           C   K+ +A ELF  +   G K D  +Y I+I G CKN    EA  L R M  +GI
Sbjct: 432 CKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 134/306 (43%), Gaps = 70/306 (22%)

Query: 60  GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
           G  H+  + +A  LFFEM+     PS+V F                +RLL          
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDF----------------TRLLT------ATA 82

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           N   Y T++                  ME  G  HD  S+ ILI+ +C+   +  ALS+ 
Sbjct: 83  NLRRYETVI-------------YFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVL 129

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            +M+  G +P++VT+ +L  G   ++++  A  L   M                    K+
Sbjct: 130 GKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM-------------------VKS 170

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           GY                E ++  YN LIDGLCK+G L IALEL   + ++ L ADVVTY
Sbjct: 171 GY----------------EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           N ++ GLC  G+   A  +  DM + ++ P+V+ F  LI  FV+     +  EL  +M +
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274

Query: 360 KKVMPD 365
             V P+
Sbjct: 275 SSVDPN 280



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 100/215 (46%)

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L  G+  +   E+A +L+ EMV     P++V +  L      + + E  +   ++M+   
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           ++ D  ++   I   C+   +  A+ +   +  L  E  I  +  L+ G C   R+  A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            L   + +     +VV YN +I GLC +G+++ A +L  +ME+  +  +V+ + TL+ G 
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               + S    +L  M ++ + PD    + ++D+ 
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVF 256


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  237 bits (605), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 198/365 (54%), Gaps = 3/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYN II+G+C+EG VD A+ L  ++      PD V+Y +L+ GLC +  W++ +
Sbjct: 209 CTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVE 268

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EMM++   P+ VTF++++   C+ G ++ A ++L+ M +     N    + +++  
Sbjct: 269 ELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSI 328

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A +L   M S GC  D +SY  ++ G C+ +  ++A  L  EMV     P  
Sbjct: 329 CKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNE 388

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NT    L +   +E A+ L E+M          TYN  ++G C  G+I  A+ELFR+
Sbjct: 389 VTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRS 448

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ +   Y  L+ GLC + RL+ A EL   + R     +VVT+N+++   C  G 
Sbjct: 449 M---PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGF 505

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A +L   M E+   PN+I + TL+ G  +       +ELLH +  K V PD    S 
Sbjct: 506 LEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSS 565

Query: 372 VVDLL 376
           ++ +L
Sbjct: 566 IIGIL 570



 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 194/363 (53%), Gaps = 3/363 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN VTY  +++ +C+    ++A A+  +M+ +   P++VTYN +I+G+C     ++A+
Sbjct: 174 CQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 233

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   +   G QP  V++  ++  LC + + D+   L   M++++  PN  T+  L+  F
Sbjct: 234 ELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFF 293

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + RA ++   M   GC  +    NI+IN  CK   V++A  L  +M S G  P  
Sbjct: 294 CRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDT 353

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++Y T+  GL    + + A +L  EM R++   +  T+NTFI  LC+ G I +A+ L   
Sbjct: 354 ISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQ 413

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C + +  YN L++G C  G ++ ALELFRS+P +    + +TY  ++ GLCN  +
Sbjct: 414 MSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAER 470

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D A +L  +M      PNV+ F  L+  F +     + IEL+ +M E    P+    + 
Sbjct: 471 LDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNT 530

Query: 372 VVD 374
           ++D
Sbjct: 531 LLD 533



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 175/344 (50%), Gaps = 3/344 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
            YNT++ G C+ G +D A+ L   M    + PD  TY  LI  LC      +A  L  +M
Sbjct: 113 AYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDM 169

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           + +G QP+VVT+ V+++ +C+N   ++A  +LD M  +   PN  TY+ +++G C  G++
Sbjct: 170 LRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRV 229

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A EL   + S G + D VSY  L+ G C +K  ++   L+ EM+ K   P  VT++ L
Sbjct: 230 DDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDML 289

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
                    VE A+++ E+M     A +T+  N  I+ +CK G + +A +L   +G   C
Sbjct: 290 IRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGC 349

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D  +Y  ++ GLC++ R + A EL   + R     + VT+N  I  LC  G +++A  
Sbjct: 350 NPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIM 409

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           L   M E+     V+ +  L++GF         +EL   M  K 
Sbjct: 410 LIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKP 453



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 179/352 (50%), Gaps = 3/352 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  NT   N +I+ +CK+G VD A  L   M     NPD ++Y +++ GLC A  W++AK
Sbjct: 314 CATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAK 373

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+     P+ VTFN  +  LC+ G +++A  L++ M +        TY+ L++GF
Sbjct: 374 ELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGF 433

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C+ G I+ A ELF    SM CK + ++Y  L+ G C  + ++ A  L  EM+     P V
Sbjct: 434 CVQGHIDSALELF---RSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNV 490

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+N L     +   +E A++L E+M       +  TYNT +DG+ K+    +A+EL   
Sbjct: 491 VTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHG 550

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L       D+  ++ +I  L K  R+E A++LF  +    +    V YN ++ GLC   +
Sbjct: 551 LVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCE 610

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           +D A D F  M  N   PN   ++ LI G        +  +LL  +  + V+
Sbjct: 611 IDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVL 662



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 163/346 (47%), Gaps = 3/346 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+      +I  LC+ G    A  +    +G     DV  YN+L+ G C     + A+RL
Sbjct: 74  PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL 133

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M    V P   T+  ++  LC  G++ +A  LLD M++R  +PN  TY+ L++  C 
Sbjct: 134 IGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCR 190

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
                +A  +   M + GC  + V+YN++ING C+   V++A  L   + S G +P  V+
Sbjct: 191 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVS 250

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  GL    + +   +LF EM   +   +  T++  I   C+ G +  A+++   + 
Sbjct: 251 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMT 310

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  +    N +I+ +CK GR++ A +L   +       D ++Y  ++ GLC   + D
Sbjct: 311 EHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWD 370

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
            A +L  +M  N   PN + F T I    +     + I L+ +M E
Sbjct: 371 DAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSE 416



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 150/317 (47%), Gaps = 3/317 (0%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           PDV     LI  LC     ++A R+       G    V  +N ++   C+ G +D A RL
Sbjct: 74  PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL 133

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
           +  M    V P+A+TY+ L+   C  G++  A  L   M   GC+ + V+Y +L+   C+
Sbjct: 134 IGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCR 190

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
           N   E+A+++  EM +KG  P +VTYN +  G+    +V+ A +L   +       DT +
Sbjct: 191 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVS 250

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           Y T + GLC +    +  ELF  +    C  +   ++ LI   C+ G +E A+++   + 
Sbjct: 251 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMT 310

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
                 +    NI+I+ +C  G++D A  L  DM      P+ I + T++ G  R  +  
Sbjct: 311 EHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWD 370

Query: 349 KVIELLHKMKEKKVMPD 365
              ELL++M      P+
Sbjct: 371 DAKELLNEMVRNNCPPN 387



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 3/285 (1%)

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           G  P V     ++  LC+ G+  +A+R+L          + F Y+TL+ G+C  G ++ A
Sbjct: 71  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
             L GSM       D  +Y  LI   C    V +ALSL  +M+ +G +P VVTY  L   
Sbjct: 131 RRLIGSMPV---APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
           +      E A+ + +EM+      +  TYN  I+G+C+ G + +A EL   L     + D
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
             +Y  L+ GLC S R +   ELF  +  +  + + VT++++I   C  G +++A  +  
Sbjct: 248 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLE 307

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            M E+  A N  +   +I+   +  +     +LL+ M      PD
Sbjct: 308 QMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPD 352



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 3/256 (1%)

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           P+ +  + L+   C  G+ + A  +  + E  G   D  +YN L+ GYC+   ++ A  L
Sbjct: 74  PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL 133

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
              M    + P   TY  L   L +  +V  AL L ++M R     +  TY   ++ +C+
Sbjct: 134 IGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCR 190

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           N    +A+ +   +    C  +I  YN +I+G+C+ GR++ A EL   LP      D V+
Sbjct: 191 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVS 250

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y  ++ GLC   + D   +LF +M E    PN + F  LI  F R     + I++L +M 
Sbjct: 251 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMT 310

Query: 359 EKKVMPDASIVSMVVD 374
           E     + ++ ++V++
Sbjct: 311 EHGCATNTTLCNIVIN 326



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 4/166 (2%)

Query: 210 ALKLFEEMQR-DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLI 268
           A++L E     D  A D       I  LC+ G   +A  + R        +D+ AYN L+
Sbjct: 59  AVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLV 118

Query: 269 DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVA 328
            G C+ G L+ A  L  S+P   +  D  TY  +I  LC+ G++  A  L  DM      
Sbjct: 119 AGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQ 175

Query: 329 PNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           PNV+ +  L+    R +   + + +L +M+ K   P+    +++++
Sbjct: 176 PNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIIN 221


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  237 bits (605), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 115/276 (41%), Positives = 173/276 (62%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN + YNTIID LCK+  V +A  LF +M  + I+PD+ TYNSLIH LC+  +W    
Sbjct: 248 CRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVT 307

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM++  + P+VV F+ ++D LCK G +  A  ++D+M++R V P+  TY+ LMDG 
Sbjct: 308 TLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGH 367

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL  +++ A ++F +M   GC  +  SYNILINGYC+ + +++A+ L  +M  +G+    
Sbjct: 368 CLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADT 427

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  GL  + +++HA+ LF EM       D  TY   +D LCKN ++ EA+ L + 
Sbjct: 428 VTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA 487

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           +     + DI  YN  IDG+C++G LE A +LF +L
Sbjct: 488 IEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNL 523



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 185/363 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TV +  ++  + K        +L  QM    I PDV T N LI+  CH      A  +
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 169

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G QP   TFN ++  LC  GK+ EA  L D  +    +P+  TY TLM+G C 
Sbjct: 170 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 229

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A  L  SM    C+ + ++YN +I+  CK+++V EA +L+ EM++KGI P + T
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 289

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L   L  + + +H   L  EM    +  +   ++T +D LCK G I  A ++   + 
Sbjct: 290 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 349

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E D+  Y  L+DG C    ++ A+++F ++  +  V +V +YNI+I+G C   +MD
Sbjct: 350 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 409

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA  L   M    +  + + + TLIHG   + +    I L H+M     +PD     +++
Sbjct: 410 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 469

Query: 374 DLL 376
           D L
Sbjct: 470 DYL 472



 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 157/342 (45%), Gaps = 41/342 (11%)

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD---VRP 119
           H N  ++A   F  M+     PS V F  ++  +    KM   S +L L  Q D   + P
Sbjct: 89  HFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSI---AKMKHYSTVLSLSTQMDSFGIPP 145

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           + +T + L++ FC   ++  A  +   +  +GC+ D+ ++N LI G C   ++ EAL L+
Sbjct: 146 DVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLF 205

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            + + +G +P VVTY TL  GL ++     A++L   M + +   +   YNT ID LCK+
Sbjct: 206 DKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKD 265

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLI------------------------------- 268
             + EA  LF  +       DI  YN LI                               
Sbjct: 266 RQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF 325

Query: 269 ----DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
               D LCK G + IA ++   + +R +  DVVTY  ++ G C   +MD+A  +F  M  
Sbjct: 326 STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 385

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
               PNV  +  LI+G+ +I +  K + LL +M  + ++ D 
Sbjct: 386 KGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADT 427



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 117/211 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V ++T++D LCKEG +  A  +   M    + PDVVTY +L+ G C  ++ +EA ++
Sbjct: 320 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKV 379

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+ +G  P+V ++N++++  C+  +MD+A  LL+ M  + +  +  TY+TL+ G C 
Sbjct: 380 FDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCH 439

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A  LF  M + G   D V+Y IL++  CKN  + EA+ L + +    +   ++ 
Sbjct: 440 VGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILV 499

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAA 224
           YN    G+    ++E A  LF  +     AA
Sbjct: 500 YNIAIDGMCRAGELEAARDLFSNLSCQGFAA 530



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 79/140 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  +YN +I+G C+   +DKA  L  QM  + +  D VTYN+LIHGLCH      A 
Sbjct: 388 CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAI 447

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+  G  P +VT+ +++D LCKN  + EA  LL  +   ++  +   Y+  +DG 
Sbjct: 448 ALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGM 507

Query: 132 CLTGKINRAEELFGSMESMG 151
           C  G++  A +LF ++   G
Sbjct: 508 CRAGELEAARDLFSNLSCQG 527



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 87/174 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTY  ++DG C    +D+A  +F  M  +   P+V +YN LI+G C     ++A  
Sbjct: 354 EPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMG 413

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M  QG+    VT+N ++  LC  G++  A  L   MV     P+  TY  L+D  C
Sbjct: 414 LLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLC 473

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
               +  A  L  ++E      D + YNI I+G C+  E+E A  L+  +  +G
Sbjct: 474 KNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQG 527



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 71/170 (41%)

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           ++ AL  F  M        T  +   +  + K  +    + L   +       D+   N 
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LI+  C   RL  A  +   L +     D  T+N +I GLC +G++ +A  LF       
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             P+V+ + TL++G  ++   S  I LL  M +K   P+    + ++D L
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSL 262


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  237 bits (604), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 207/360 (57%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+Y+T+I+G C  G + K   L  +M+ + + P++ TYNS+I  LC +   ++A+R+
Sbjct: 8   PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM++QG+ P  V +  ++D  CK G +  A +L D M ++ + P+   Y+ ++ G C 
Sbjct: 68  LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A+++F  M S G + D+V+Y  LI+GYCK+ E+E+A SL+ +MV  G+ P VVT
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL ++ QV+ A +L  EM    +  +  TYN+ ++GLCK+G I +AV+L   + 
Sbjct: 188 YTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEME 247

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +     D   +  L+D  CK+G +  A EL R +  R L   V+T+N++++G C  G ++
Sbjct: 248 VAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLE 307

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
               L   M E  + PN   + +L+  +   N      E+   M  + VMPD++  ++++
Sbjct: 308 DGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILI 367



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 112/326 (34%), Positives = 182/326 (55%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           MK     PDVV+Y+++I+G C   +  +  +L  EM  +G++P++ T+N I+  LCK+GK
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D+A R+L  M+ + + P+   Y+TL+DGFC  G I  A +LF  ME      D ++Y  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           +I G C+  ++ EA  ++ +M S+G++P  VTY TL  G  +  ++E A  L  +M +  
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           +  +  TY    DGLCK G +  A EL   +     +L+I  YN L++GLCKSG +  A+
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           +L   +    +  D +T+  ++   C  G+M KAH+L  +M +  + P VI F  L++GF
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 342 VRINKPSKVIELLHKMKEKKVMPDAS 367
                      LL  M EK +MP+ +
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTT 326



 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/355 (33%), Positives = 183/355 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN  TYN+II  LCK G VD A+ +  +M  + I PD V Y +LI G C   +   A +
Sbjct: 42  KPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYK 101

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  Q + P  + +  ++  LC+ GKM EA ++ + M  R V P+  TY+TL+DG+C
Sbjct: 102 LFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYC 161

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G++ +A  L   M   G   + V+Y  L +G CK  +V+ A  L  EM  KG++  + 
Sbjct: 162 KSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNIC 221

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  GL +   +  A+KL EEM+   +  DT T+ T +D  CK G +V+A EL R +
Sbjct: 222 TYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREM 281

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +  +  +N L++G C SG LE    L   +  + ++ +  TYN ++   C    M
Sbjct: 282 LDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNM 341

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
               +++  M    V P+   +  LI G  +     +   L  +M EK     AS
Sbjct: 342 RCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTAS 396



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 174/356 (48%), Gaps = 35/356 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TV Y T+IDG CK G +  A  LF +M+ + I PD + Y ++I GLC      EA ++
Sbjct: 78  PDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKV 137

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M  +GV+P  VT+  ++D  CK+G+M++A  L + MVQ  + PN  TY+ L DG C 
Sbjct: 138 FNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCK 197

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILING---------------------------- 165
            G+++ A EL   M   G + +  +YN L+NG                            
Sbjct: 198 LGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTIT 257

Query: 166 -------YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
                  YCK  E+ +A  L REM+ +G++PTV+T+N L  G      +E   +L   M 
Sbjct: 258 FTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWML 317

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  +T+TYN+ +   C    +    E+++ +       D   YN LI G CK+  ++
Sbjct: 318 EKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMK 377

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            A  L + +  +       +YN +I G     ++ +A +LF +M    +A +  I+
Sbjct: 378 EAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIY 433



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/313 (33%), Positives = 171/313 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTY T+IDG CK G ++KA +L  QM    + P+VVTY +L  GLC     + A  
Sbjct: 147 EPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANE 206

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  +G+Q ++ T+N +++ LCK+G + +A +L++ M    + P+  T++TLMD +C
Sbjct: 207 LLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYC 266

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            TG++ +A EL   M   G +   +++N+L+NG+C +  +E+   L   M+ KGI P   
Sbjct: 267 KTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTT 326

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L       + +    ++++ M    V  D++TYN  I G CK   + EA  L + +
Sbjct: 327 TYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEM 386

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 L   +YN +I G  K  ++  A ELF  + R  + AD   YN+ +     +G M
Sbjct: 387 AEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNM 446

Query: 313 DKAHDLFLDMEEN 325
           + A +L  +  EN
Sbjct: 447 ETALELCDEAIEN 459



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 145/260 (55%)

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
           R   P+  +YST+++G+CL G++ +  +L   M+  G K +  +YN +I   CK+ +V++
Sbjct: 4   RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           A  + REM+++GI P  V Y TL  G  ++  ++ A KLF+EM++  +  D   Y   I 
Sbjct: 64  AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
           GLC+ G ++EA ++F  +     E D   Y  LIDG CKSG +E A  L   + +  L  
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           +VVTY  +  GLC  GQ+D A++L  +M    +  N+  + +L++G  +     + ++L+
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243

Query: 355 HKMKEKKVMPDASIVSMVVD 374
            +M+   + PD    + ++D
Sbjct: 244 EEMEVAGMYPDTITFTTLMD 263


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  237 bits (604), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 122/355 (34%), Positives = 187/355 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
            T++YN +++ L K G  D     +  M      P+  TY  L+  LC A  + EA+ +F
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M  QG  P+V ++++++  LC+  K+DEA+ LL+ M+    +PN  TY +L+ G C  
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK+  A +LF  M   GC  D V YN+LI+G+ K  ++ EA  L+ EM+ KG  PTV TY
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N+L  G     +      LF++M R     +  T+N  +DG CK G +VEA  LF  +  
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L C  D+ +YN LI G+C  G+   A  L R + R  +  D+V+YNI+I G    G +D 
Sbjct: 256 LGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           A  LF ++ ++ + P+   + T+I    R  K      +   M      PDA++V
Sbjct: 316 AIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVV 370



 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/360 (34%), Positives = 191/360 (53%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N  +   C PNT TY  ++  LC+    ++A+++F  M  +  +P+V +Y+ LI GLC  
Sbjct: 41  NDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRG 100

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
              +EA  L  EM+D G QP+VVT+  ++  LCK GK+ EA  L   MV R   P+   Y
Sbjct: 101 QKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVY 160

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + L+DGF   G +  A  LF  M   GC     +YN L++G+ +  E     SL+++M+ 
Sbjct: 161 NVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLR 220

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           +G  P + T+N L  G  ++  +  A +LF EM+      D  +YNT I G+C  G   E
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHE 280

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A  L R +       DI +YN LIDG  KSG L+ A++LF  +P+  L  D  +Y+ +I 
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            LC  G++  A  +F DM  N  AP+  + + L+ G  R  + ++  EL   M + + +P
Sbjct: 341 CLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVP 400



 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 193/365 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  +Y+ +I GLC+   VD+A  L  +M      P+VVTY SL+ GLC      EA 
Sbjct: 83  CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M+ +G  P  V +NV++D   K G M EA RL + M+++   P  FTY++L+ GF
Sbjct: 143 DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGF 202

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+  R + LF  M   GC  +  ++N L++G+CK  ++ EA  L+ EM S G  P V
Sbjct: 203 SRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDV 262

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+YNTL  G+    +   A +L  EM R  V  D  +YN  IDG  K+G +  A++LF  
Sbjct: 263 VSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYE 322

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     E D  +Y+ +ID LC++G++  A  +F+ +       D      ++ GLC   +
Sbjct: 323 IPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGER 382

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + ++ +LF  M +    P +  +  L++   +  +   V E+ H++ E+   PD  I  +
Sbjct: 383 LTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKV 442

Query: 372 VVDLL 376
           +++ L
Sbjct: 443 ILETL 447



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/304 (33%), Positives = 158/304 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V YN +IDG  K+G + +A  LF +M  +   P V TYNSL+ G     ++   +
Sbjct: 153 CPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQ 212

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF +M+ QG  P++ TFN ++D  CK G M EA RL   M      P+  +Y+TL+ G 
Sbjct: 213 SLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGM 272

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK + A+ L   M   G   D VSYNILI+GY K+  ++ A+ L+ E+   G++P  
Sbjct: 273 CSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDA 332

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +Y+T+   L    +V  A  +F++M  +  A D +     + GLC+   + E+ ELF+ 
Sbjct: 333 FSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQA 392

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +C   I  YN L+  LCK+ R +   E+F  L  R    DV    +++  L     
Sbjct: 393 MVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDD 452

Query: 312 MDKA 315
            D A
Sbjct: 453 KDAA 456



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 167/340 (49%), Gaps = 2/340 (0%)

Query: 39  FLQMKGENI--NPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
           F Q  G  +  N   ++YN L+  L  +   +     + +M+  G  P+  T+  ++  L
Sbjct: 3   FFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSL 62

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           C+  + +EA  +   M  +   PN F+YS L+ G C   K++ A EL   M   G + + 
Sbjct: 63  CQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNV 122

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           V+Y  L++G CK  +++EA+ L+  MV +G  P  V YN L  G  +   +  A +LFEE
Sbjct: 123 VTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEE 182

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M          TYN+ + G  + G       LF+ +    C  +I  +N L+DG CK G 
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +  A  LF  +       DVV+YN +I G+C+ G+  +A  L  +M  + V P+++ +  
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           LI G+ +       I+L +++ +  + PDA   S ++D L
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCL 342


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/373 (35%), Positives = 212/373 (56%), Gaps = 18/373 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA-------- 64
           KPN + YNT++ GLCK+G +++A+ L  +M  + I PD+ TY+SLI+GLC A        
Sbjct: 194 KPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTS 253

Query: 65  --------NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
                   N  +EA+ LF  M+++G Q  ++ +N++M+  C N K+ EA +L  +MV+R 
Sbjct: 254 LLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERG 313

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
            +P+  TY+ LM G+CL  K++ A  LF  M   G   D  SYNILI GYCK + V EA+
Sbjct: 314 EQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAM 373

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR-DDVAADTSTYNTFIDG 235
           +L  +M  K + P ++TYN++  GL +   +  A KL +EM        D +TYN  ++ 
Sbjct: 374 NLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLES 433

Query: 236 LCKNGYIVEAVELFRTLGILKC-ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
           LC+   + +A+  F+ L   +    ++ +YN LI G CK+ RL+ A+ LF  +  + LV 
Sbjct: 434 LCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVP 493

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           D+VTYNI++  L N  Q+DKA  L + + +  ++PN+  +  LI+G  +  +P    ++ 
Sbjct: 494 DIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKIS 553

Query: 355 HKMKEKKVMPDAS 367
             +  +   PD  
Sbjct: 554 LYLSIRGYHPDVK 566



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/390 (33%), Positives = 203/390 (52%), Gaps = 29/390 (7%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN--DWNE 69
           C+PN VT+ T++ G C    +  A  ++ +M    I  D V Y +LI+GLC +       
Sbjct: 120 CRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRA 179

Query: 70  AKRLFFEMMD-QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS--- 125
           A +L  +M + Q V+P+++ +N ++  LCK+G ++EA  L   M+ + + P+ FTYS   
Sbjct: 180 AVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLI 239

Query: 126 -------------TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
                        +L++GFCL  K++ A ELF  M   G +HD ++YNIL+NGYC N +V
Sbjct: 240 YGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKV 299

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
            EA  L+  MV +G +P  +TY  L  G   I +V+ A  LF  M    +  D  +YN  
Sbjct: 300 GEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNIL 359

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL----- 287
           I G CK   + EA+ L   + +     +I  YN ++DGLCKSG +  A +L   +     
Sbjct: 360 IKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQ 419

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM-EENAVAPNVIIFVTLIHGFVRINK 346
           P      DV TYNI++  LC    ++KA   F  +  E + APNV  +  LI G  +  +
Sbjct: 420 PP----PDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRR 475

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             + I L + M  K ++PD    ++++D L
Sbjct: 476 LDEAINLFNHMCFKNLVPDIVTYNILLDAL 505



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 189/367 (51%), Gaps = 19/367 (5%)

Query: 27  CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           CK   +D A ALF +M   +  P +V +  ++  +     +  A  L+  M  +GV P  
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
           VTFN++++  C  G+MD A  ++  +++   RPN  T++TLM GFC+  K+  A  ++  
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149

Query: 147 MESMGCKHDDVSYNILINGYCKNK--EVEEALSLYREMVSKG-IKPTVVTYNTLFLGLFE 203
           M +   + DDV Y  LING CK+K  +   A+ L ++M  +  +KP ++ YNT+  GL +
Sbjct: 150 MVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCK 209

Query: 204 IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK-----------NGYIV-----EAVE 247
              +  A  L  +M    +  D  TY++ I GLC+           NG+ +     EA E
Sbjct: 210 DGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARE 269

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           LF  +     + DI  YN L++G C + ++  A +LF  +  R    D +TY I++HG C
Sbjct: 270 LFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYC 329

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
              ++D+A +LF  M E  + P+V  +  LI G+ +  +  + + LL  M  K ++P+  
Sbjct: 330 LIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNII 389

Query: 368 IVSMVVD 374
             + VVD
Sbjct: 390 TYNSVVD 396



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 148/298 (49%), Gaps = 39/298 (13%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + + YN +++G C    V +A+ LF  M      PD +TY  L+HG C  +  +EA+ LF
Sbjct: 282 DIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLF 341

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M+++G+ P V ++N+++   CK  ++ EA  LL+ M  +++ PN  TY++++DG C +
Sbjct: 342 HGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKS 401

Query: 135 GKINRAEELFGSMESMGCKHDDV------------------------------------- 157
           G I  A +L   M        DV                                     
Sbjct: 402 GGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVW 461

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           SYNILI+G CKN+ ++EA++L+  M  K + P +VTYN L   LF   Q++ A+ L  ++
Sbjct: 462 SYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQI 521

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
               ++ +  TYN  I+GL K G    A ++   L I     D++ Y  +I+ LCK G
Sbjct: 522 VDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY--IINELCKGG 577



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 65/111 (58%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  +YN +I G CK   +D+A  LF  M  +N+ PD+VTYN L+  L +    ++A  L
Sbjct: 458 PNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIAL 517

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
             +++DQG+ P++ T+N++++ L K G+   A ++   +  R   P+  TY
Sbjct: 518 LVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY 568


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/364 (35%), Positives = 205/364 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY T+I  LC+ G +D A   F QM  + + PD   Y+ LI G C      +AK 
Sbjct: 428 KPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKE 487

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  E+M+ G++  +V F  I++ LCK G++ +A  + DL V   + P+A  Y+ LMDG+C
Sbjct: 488 LISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYC 547

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK+ +A  +F +M S G + + V Y  L+NGYCK   ++E LSL+REM+ KGIKP+ +
Sbjct: 548 LVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTI 607

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN +  GLFE  +   A   F EM    +A +  TY+  + GL KN    EA+ LF+ L
Sbjct: 608 LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKEL 667

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  ++DI   N +I G+ ++ R+E A +LF S+ R  LV   VTY+IMI  L  +G +
Sbjct: 668 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLV 727

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A D+F  M+     P+  +   ++   ++ N+  +    L K+ E+    +     ++
Sbjct: 728 EEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLL 787

Query: 373 VDLL 376
           VDL 
Sbjct: 788 VDLF 791



 Score =  224 bits (570), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 130/406 (32%), Positives = 205/406 (50%), Gaps = 35/406 (8%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
            E G VC P+ V YNT+IDG  KEG V+KA  LF +M    I PD+VTY+S++H LC A 
Sbjct: 211 AEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKAR 270

Query: 66  -----------------------------------DWNEAKRLFFEMMDQGVQPSVVTFN 90
                                               W EA R+F EM  Q + P VV  N
Sbjct: 271 AMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALN 330

Query: 91  VIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
            +M  LCK GK+ EA  + D M  +   P+ F+Y+ +++G+   G +    +LF  M   
Sbjct: 331 TLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGD 390

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G      ++N+LI  Y     +++A+ ++ EM   G+KP VVTY T+   L  I +++ A
Sbjct: 391 GIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDA 450

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           ++ F +M    V  D   Y+  I G C +G +++A EL   +      LDI  +  +I+ 
Sbjct: 451 MEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINN 510

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LCK GR+  A  +F       L  D V YN+++ G C  G+M+KA  +F  M    + PN
Sbjct: 511 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 570

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           V+ + TL++G+ +I +  + + L  +M +K + P   + ++++D L
Sbjct: 571 VVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 616



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 176/385 (45%), Gaps = 38/385 (9%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           V  P + TY  ++D   +    + A A F Q+    +  D +  + L+ G C A   +EA
Sbjct: 108 VLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEA 167

Query: 71  KRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV--RPNAFTYSTL 127
             +      + G  P V ++N+++  LC  GK  +A  LL +M +      P+   Y+T+
Sbjct: 168 LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTV 227

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DGF   G +N+A +LF  M   G   D V+Y+ +++  CK + +++A +  R+MV+KG+
Sbjct: 228 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 287

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P   TYN L  G     Q + A+++F+EM+R  +  D    NT +  LCK G I EA +
Sbjct: 288 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARD 347

Query: 248 LFRTLGILKCELDIQAY-----------------------------------NCLIDGLC 272
           +F T+ +     D+ +Y                                   N LI    
Sbjct: 348 VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYA 407

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
             G L+ A+ +F  +    +   VVTY  +I  LC  G+MD A + F  M +  V P+  
Sbjct: 408 NCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKY 467

Query: 333 IFVTLIHGFVRINKPSKVIELLHKM 357
            +  LI GF       K  EL+ ++
Sbjct: 468 AYHCLIQGFCTHGSLLKAKELISEI 492



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 176/352 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V  NT++  LCK G + +A+ +F  M  +  NPDV +Y  +++G        +   L
Sbjct: 324 PDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDL 383

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+  G+ P + TFNV++      G +D+A  + + M    V+P+  TY T++   C 
Sbjct: 384 FDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCR 443

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A E F  M   G   D  +Y+ LI G+C +  + +A  L  E+++ G++  +V 
Sbjct: 444 IGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVF 503

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           + ++   L ++ +V  A  +F+      +  D   YN  +DG C  G + +A+ +F  + 
Sbjct: 504 FGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV 563

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E ++  Y  L++G CK GR++  L LFR + ++ +    + YNI+I GL   G+  
Sbjct: 564 SAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 623

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            A   F +M E+ +A N   +  ++ G  +     + I L  +++   V  D
Sbjct: 624 PAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKID 675



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 172/360 (47%), Gaps = 44/360 (12%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           ++P   TY  L+     A+    A   F +++  G++   +  + ++   C+  + DEA 
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEA- 167

Query: 107 RLLDLMVQRDVR----PNAFTYSTLMDGFCLTGKINRAEELFGSMESMG--CKHDDVSYN 160
             LD+++ R       P+ F+Y+ L+   C  GK  +A++L   M   G  C  D V+YN
Sbjct: 168 --LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYN 225

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVV---------------------------- 192
            +I+G+ K  +V +A  L++EMV +GI P +V                            
Sbjct: 226 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNK 285

Query: 193 -------TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
                  TYN L  G     Q + A+++F+EM+R  +  D    NT +  LCK G I EA
Sbjct: 286 GVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEA 345

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            ++F T+ +     D+ +Y  +++G    G L    +LF  +    +   + T+N++I  
Sbjct: 346 RDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKA 405

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             N G +DKA  +F +M ++ V P+V+ ++T+I    RI K    +E  ++M ++ V+PD
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 119/269 (44%), Gaps = 44/269 (16%)

Query: 115 RDVRPNAFTYSTLMD-----------------------------------GFCLTGKINR 139
           R + P ++TY+ LMD                                   GFC   + + 
Sbjct: 107 RVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDE 166

Query: 140 AEE-LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI--KPTVVTYNT 196
           A + L      +GC  D  SYNIL+   C   +  +A  L R M   G    P VV YNT
Sbjct: 167 ALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNT 226

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---G 253
           +  G F+   V  A  LF+EM +  +  D  TY++ +  LCK   + +A    R +   G
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +L    D   YN LI G   +G+ + A+ +F+ + R+ ++ DVV  N ++  LC  G++ 
Sbjct: 287 VLP---DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIK 343

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           +A D+F  M      P+V  +  +++G+ 
Sbjct: 344 EARDVFDTMAMKGQNPDVFSYTIMLNGYA 372



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 114/237 (48%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V Y T+++G CK G +D+  +LF +M  + I P  + YN +I GL  A     AK 
Sbjct: 568 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM + G+  +  T+++++  L KN   DEA  L   +   +V+ +  T +T++ G  
Sbjct: 628 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 687

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            T ++  A++LF S+   G     V+Y+I+I    K   VEEA  ++  M + G +P   
Sbjct: 688 QTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSR 747

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             N +   L + +++  A     ++   + + +  T    +D     G   E +   
Sbjct: 748 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 125/365 (34%), Positives = 195/365 (53%), Gaps = 3/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYN II+G+C+EG VD AK +  ++      PD+V+Y +++ GLC A  W++ K
Sbjct: 207 CTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVK 266

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+D+   P+ VTF++++   C+ G ++ A ++L  M Q    PN    + +++  
Sbjct: 267 VLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAI 326

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A +   +M   GC  D +SY  ++ G C+    E A  L  EMV K   P  
Sbjct: 327 CKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNE 386

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NT    L +   +E A+KL E M     +    TYN  + G C  G +  A+ELF  
Sbjct: 387 VTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNN 446

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L    CE +   Y  L+ GLC + RL+ A EL   + ++    + VT+N+++   C  G 
Sbjct: 447 L---PCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGF 503

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A +L   M E+   PN+I F TL+ G  +     + +ELLH +  K V  D    S 
Sbjct: 504 VEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSS 563

Query: 372 VVDLL 376
           VVD+L
Sbjct: 564 VVDVL 568



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 178/340 (52%), Gaps = 3/340 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
            YNT++ G C+ G +D A+ L   M    + PD  TY  +I GLC      +A  L  +M
Sbjct: 111 AYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDM 167

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           + +G QPSVVT+ V+++ +CK+    EA  +LD M  +   PN  TY+ +++G C  G++
Sbjct: 168 LQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRV 227

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A+E+   + S G + D VSY  ++ G C  +  ++   L+ EMV K   P  VT++ L
Sbjct: 228 DDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDML 287

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
                    VE A+++ ++M +     +T+  N  I+ +CK G + +A +    +G+  C
Sbjct: 288 VRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGC 347

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D  +Y  ++ GLC++GR E A EL   + R+    + VT+N  I  LC  G +++A  
Sbjct: 348 NPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIK 407

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           L   M E   +  ++ +  L+HGF    +    +EL + +
Sbjct: 408 LIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL 447



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 168/331 (50%), Gaps = 3/331 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNT   N +I+ +CK+G VD A      M     NPD ++Y +++ GLC A  W  AK
Sbjct: 312 CTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAK 371

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+ +   P+ VTFN  +  LC+ G +++A +L++LM +        TY+ L+ GF
Sbjct: 372 ELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGF 431

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C+ G+++ A ELF ++    C+ + ++Y  L+ G C  + ++ A  L   M+ K      
Sbjct: 432 CVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNA 488

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+N L     +   VE A++L  +M       +  T+NT +DG+ K+    EA+EL   
Sbjct: 489 VTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHG 548

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L      LD   Y+ ++D L +  R E A+++  ++    +   V  YN ++  LC   +
Sbjct: 549 LVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCE 608

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
            D+A D F  M  N   PN   ++ LI G  
Sbjct: 609 TDQAIDFFAYMVSNGCMPNESTYIILIEGLA 639



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 178/365 (48%), Gaps = 3/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VT++ ++   C+ G V++A  +  QM      P+    N +I+ +C     ++A 
Sbjct: 277 CVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAY 336

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                M   G  P  +++  ++  LC+ G+ + A  LL  MV+++  PN  T++T +   
Sbjct: 337 DFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICIL 396

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I +A +L   M   GC    V+YN L++G+C    V+ AL L+  +     +P  
Sbjct: 397 CQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNT 453

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY TL  GL    +++ A +L   M + D   +  T+N  +   C+ G++ EA+EL   
Sbjct: 454 ITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQ 513

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  ++  +N L+DG+ K    E ALEL   L  + +  D +TY+ ++  L  + +
Sbjct: 514 MMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDR 573

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            ++A  +   +++  + P V ++  ++    +  +  + I+    M     MP+ S   +
Sbjct: 574 TEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYII 633

Query: 372 VVDLL 376
           +++ L
Sbjct: 634 LIEGL 638



 Score =  154 bits (388), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 151/317 (47%), Gaps = 3/317 (0%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           PDV     LI  LC     ++A R+       G    V  +N ++   C+ G++D A RL
Sbjct: 72  PDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRL 131

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
           +  M    V P+A+TY+ ++ G C  G++  A  L   M   GC+   V+Y +L+   CK
Sbjct: 132 IASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCK 188

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
           +    EA+++  EM +KG  P +VTYN +  G+    +V+ A ++   +       D  +
Sbjct: 189 SSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVS 248

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           Y T + GLC      +   LF  +   KC  +   ++ L+   C+ G +E A+++ + + 
Sbjct: 249 YTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMS 308

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
           +     +    NI+I+ +C  G++D A+D   +M      P+ I + T++ G  R  +  
Sbjct: 309 QHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWE 368

Query: 349 KVIELLHKMKEKKVMPD 365
              ELL +M  K   P+
Sbjct: 369 HAKELLPEMVRKNCPPN 385



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 134/275 (48%), Gaps = 3/275 (1%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           + EA+RL++    R   P+ +  + L+   C  G+ + A  +  + E+ G   D  +YN 
Sbjct: 55  LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L+ GYC+   ++ A    R + S  + P   TY  +  GL +  +V  AL L ++M +  
Sbjct: 115 LVAGYCRYGRLDAA---RRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG 171

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
                 TY   ++ +CK+    EA+ +   +    C  +I  YN +I+G+C+ GR++ A 
Sbjct: 172 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAK 231

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           E+   L       D+V+Y  ++ GLC   + D    LF +M +    PN + F  L+  F
Sbjct: 232 EILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFF 291

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            R     + I++L +M +    P+ ++ ++V++ +
Sbjct: 292 CRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAI 326



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 97/182 (53%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G I   C  N VT+N ++   C++GFV++A  L  QM      P+++T+N+L+ G+    
Sbjct: 478 GMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDC 537

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
           +  EA  L   ++ +GV    +T++ ++D L +  + +EA ++L  +    +RP    Y+
Sbjct: 538 NSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYN 597

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            ++   C   + ++A + F  M S GC  ++ +Y ILI G      ++EA  +  E+ +K
Sbjct: 598 KILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAK 657

Query: 186 GI 187
           G+
Sbjct: 658 GV 659


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 128/385 (33%), Positives = 191/385 (49%), Gaps = 32/385 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN +IDGLCK    DKA  +  +M    + PD VT+NS++ GLC A  +  A  L
Sbjct: 8   PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M ++  +PS  T+N ++  LCK   +D A  L+D  V     P+  TYS L DG C 
Sbjct: 68  LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+I+ A EL   M   GC  + V+YN LI+G CK  + E+A  L   +VS G  P VVT
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT 187

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  +  GL +  +++ ALK+ E M +        TY   ++GLC+ G + EA  +F+ + 
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 247

Query: 254 ILKCELD--------------------------------IQAYNCLIDGLCKSGRLEIAL 281
              C  D                                I  YN L+DG CK GRL+   
Sbjct: 248 SKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIP 307

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            +F  +  R  V ++ TYNI++ GLC  G++D+A      M      P+V+ +  +I G 
Sbjct: 308 NVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGL 367

Query: 342 VRINKPSKVIELLHKMKEKKVMPDA 366
            + +KP +  ++L +M +  + PDA
Sbjct: 368 FKASKPKEARQVLDQMIQAGIPPDA 392



 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 122/383 (31%), Positives = 199/383 (51%), Gaps = 42/383 (10%)

Query: 12  CKPNTVTYNTII-----------------------------------DGLCKEGFVDKAK 36
           C+P+  TYNT+I                                   DGLCK G +D+A 
Sbjct: 76  CRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAF 135

Query: 37  ALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
            L  +M G    P++VTYN+LI GLC A+   +A  L   ++  G  P VVT+ +I+D L
Sbjct: 136 ELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGL 195

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           CK G++D+A ++++ M++R   P+  TY+ LM+G C TG+++ A  +F  M S  C  D 
Sbjct: 196 CKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADA 255

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIK--PTVVTYNTLFLGLFEIHQVEHALKLF 214
           ++Y  L+NGYCK+   +EA     + V  GI+  P +  YN L  G  +  +++    +F
Sbjct: 256 LAYVSLVNGYCKSSRTKEA-----QKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVF 310

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           E+M       +  TYN  +DGLCK+G + EA     ++    C  D+ +YN +IDGL K+
Sbjct: 311 EDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKA 370

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            + + A ++   + +  +  D VTYN ++   C + + D A  +  +M +  V P+ + +
Sbjct: 371 SKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTY 430

Query: 335 VTLIHGFVRINKPSKVIELLHKM 357
            TLI G  + N+     EL+H+M
Sbjct: 431 NTLISGLSQTNRLGDAYELMHEM 453



 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 184/367 (50%), Gaps = 32/367 (8%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           M    + PDV TYN LI GLC A+  ++A  +  EM+D+GV P  VTFN IMD LCK GK
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
            + A  LL +M +R+ RP+  TY+TL+ G C    ++RA+ L     S G   D V+Y+I
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L +G CK   ++EA  L +EM   G  P +VTYNTL  GL +  + E A +L E +    
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              D  TY   +DGLCK G + +A+++   +    C   +  Y  L++GLC++GR++ A 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 282 ELFRSLPRRVLVADVVT--------------------------------YNIMIHGLCND 309
            +F+ +  +   AD +                                 YN ++ G C +
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 300

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++D+  ++F DM      PN+  +  ++ G  +  K  +    L  M     +PD    
Sbjct: 301 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 360

Query: 370 SMVVDLL 376
           ++++D L
Sbjct: 361 NIIIDGL 367



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 116/349 (33%), Positives = 187/349 (53%), Gaps = 11/349 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY  +++GLC+ G VD+A  +F +M  ++   D + Y SL++G C ++   EA+
Sbjct: 216 CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQ 275

Query: 72  RLFFEMMDQGVQ--PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           ++       G++  P +  +N +MD  CK G++DE   + + M  R   PN  TY+ +MD
Sbjct: 276 KVV-----DGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMD 330

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C  GK++ A     SM S GC  D VSYNI+I+G  K  + +EA  +  +M+  GI P
Sbjct: 331 GLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPP 390

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             VTYNTL     +  + + A+ + + M +  V  D  TYNT I GL +   + +A EL 
Sbjct: 391 DAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELM 450

Query: 250 RTLGILKCELD-IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
             +    C +     YN +ID LCK G L+ AL L   +    + A+ VTYNI I  LC 
Sbjct: 451 HEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCK 510

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           +G++D+A  L  +M+      + + + T+I G  +  +  +  +L  +M
Sbjct: 511 EGRLDEASSLLSEMD---TLRDEVSYTTVIIGLCKAEQLDRASKLAREM 556



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/349 (33%), Positives = 183/349 (52%), Gaps = 7/349 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TYN ++DGLCK G VD+A      M      PDVV+YN +I GL  A+   EA+
Sbjct: 318 CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEAR 377

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++  +M+  G+ P  VT+N +M + CK  + D+A  +L  M++  V P+  TY+TL+ G 
Sbjct: 378 QVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 437

Query: 132 CLTGKINRAEELFGSMESMGCKHDD-VSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
             T ++  A EL   M   GC      +YN +I+  CK   +++AL L   M   G++  
Sbjct: 438 SQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEAN 497

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            VTYN     L +  +++ A  L  EM   D   D  +Y T I GLCK   +  A +L R
Sbjct: 498 TVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAR 554

Query: 251 TLGILK--CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            +  +K  C +    +N LID   K+ RL+ AL L   + +R     V+TYN++I  LC 
Sbjct: 555 EMVAVKGLC-ITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCK 613

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
             ++DKA +LF +M    +  + + +  LI+G     +  + +++L +M
Sbjct: 614 LDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 662



 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/367 (33%), Positives = 191/367 (52%), Gaps = 7/367 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G+   P    YN ++DG CKEG +D+   +F  M      P++ TYN ++ GLC     +
Sbjct: 280 GIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVD 339

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA      M   G  P VV++N+I+D L K  K  EA ++LD M+Q  + P+A TY+TLM
Sbjct: 340 EAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLM 399

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-I 187
             FC   + + A  +  +M   G   D+V+YN LI+G  +   + +A  L  EM+  G +
Sbjct: 400 AQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCV 459

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
                TYNT+   L +   ++ AL L + M    V A+T TYN FID LCK G + EA  
Sbjct: 460 VSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASS 519

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL-PRRVLVADVVTYNIMIHGL 306
           L   +  L+ E+   +Y  +I GLCK+ +L+ A +L R +   + L     T+N++I   
Sbjct: 520 LLSEMDTLRDEV---SYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAF 576

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
               ++D+A  L   M +   +P+VI +  +I    +++K  K  EL  +M  + ++  A
Sbjct: 577 TKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIV--A 634

Query: 367 SIVSMVV 373
           S VS  V
Sbjct: 635 SSVSYTV 641



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 151/315 (47%), Gaps = 40/315 (12%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT++   CKE   D A  +   M    ++PD VTYN+LI GL   N   +A  L
Sbjct: 390 PDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYEL 449

Query: 74  FFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             EM+  G V  +  T+N I+D LCK G + +A  L+D M    V  N  TY+  +D  C
Sbjct: 450 MHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLC 509

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSY--------------------------------- 159
             G+++ A  L   M+++    D+VSY                                 
Sbjct: 510 KEGRLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITS 566

Query: 160 ---NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
              N+LI+ + K K ++EAL+L   MV +G  P+V+TYN +   L ++ +V+ A +LF+E
Sbjct: 567 HTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDE 626

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M    + A + +Y   I GLC  G   EA+++   +    CE+D      L   L   GR
Sbjct: 627 MAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGR 686

Query: 277 LEIALELFRSLPRRV 291
            E A EL R +  ++
Sbjct: 687 GEEAAELLRRMTTKM 701


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 124/349 (35%), Positives = 191/349 (54%), Gaps = 5/349 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY  +IDG CK G ++KA  +   M+G    P+VVTY+SL+HGLC A D ++A  
Sbjct: 186 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 245

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M  +G  P+VVT+  ++  LC   K+D A  L+D M       +  +Y+ L+DG+C
Sbjct: 246 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYC 305

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM-VSKGIKPTV 191
             G+I  A++LF  M +  C  D ++Y  L+ G+C    +EEA  L   M  + GI P V
Sbjct: 306 RLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 365

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+ +  G     +   A +  +EM   +VA +  TY++ IDGLCK G +  A+E+ + 
Sbjct: 366 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKN 425

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D+  Y  +I+GLC + R E AL L   +  + +   V T+N +I  LC  G 
Sbjct: 426 VD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGD 481

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           MD+A  L + M  + + P ++ + TL+ GF R  +     EL   M+ K
Sbjct: 482 MDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRK 530



 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 208/367 (56%), Gaps = 8/367 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY +++DGLC++G +D+A  +  +MK + + PD  T+++LI G C+A   +EA +L
Sbjct: 79  PDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKL 138

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD---VRPNAFTYSTLMDG 130
           + E++    +   V+ + ++  LC+  ++ EA  L   M  R+    +P+  TY+ L+DG
Sbjct: 139 YKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDG 198

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC +G + +A ++ G ME   C  + V+Y+ L++G CK  ++++AL L+R M SKG  P 
Sbjct: 199 FCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPN 258

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY TL  GL   H+V+ A  L +EM      ADT +YN  +DG C+ G I EA +LF+
Sbjct: 259 VVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFK 318

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV-ADVVTYNIMIHGLCND 309
            +    C  D   Y CL+ G C + RLE A  L  ++     +  DVVTY+I++ G    
Sbjct: 319 EMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRA 378

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            +  +A +   +M    VAPN + + +LI G  +  + +  +E+L  + +    PD    
Sbjct: 379 KRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTY 434

Query: 370 SMVVDLL 376
           ++V++ L
Sbjct: 435 TIVIEGL 441



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 216/404 (53%), Gaps = 41/404 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMK-GENINPDVVTYNSLIHGLCHANDWNEAKR 72
           PN  TYN +++GLCK     KA  +  +M+ G+++ PD+VTY+++I+G C   + + A  
Sbjct: 7   PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66

Query: 73  LFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +  EM+ + G+ P VVT+  ++D LC++GKMD A  ++  M  + V P+ FT+S L+ G+
Sbjct: 67  ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK---GIK 188
           C   K++ A +L+  + +  C+ D VS + LI G C+ + + EA  L++EM  +     K
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTY  L  G  +   +E A+K+   M+      +  TY++ + GLCK G + +A++L
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246

Query: 249 FRTL-----------------GILK------------------CELDIQAYNCLIDGLCK 273
           FR +                 G+                    C  D  +YN L+DG C+
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCR 306

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA-VAPNVI 332
            GR+E A +LF+ +  +  + D +TY  ++ G CN  ++++A  L  +M+  A + P+V+
Sbjct: 307 LGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 366

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +  ++ G+ R  +  +  E + +M  + V P+A   S ++D L
Sbjct: 367 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 410



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 112/326 (34%), Positives = 192/326 (58%), Gaps = 5/326 (1%)

Query: 45  ENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD-QGVQPSVVTFNVIMDELCKNGKMD 103
           E + P+  TYN +++GLC A   ++A  +  EM D + V P +VT++ +++  CK G+MD
Sbjct: 3   EFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMD 62

Query: 104 EASRLLDLMVQRD-VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
            A  +L  MV RD + P+  TY++++DG C  GK++RA E+   M+  G + D  +++ L
Sbjct: 63  RACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSAL 122

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ-RDD 221
           I G+C  ++V+EAL LY+E+++   +   V+ + L  GL    ++  A +LF+EM+ R+D
Sbjct: 123 ITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRED 182

Query: 222 VA--ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
            A   D  TY   IDG CK+G + +A+++   +   KC  ++  Y+ L+ GLCK+G L+ 
Sbjct: 183 GAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQ 242

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           AL+LFR +  +  V +VVTY  +IHGLC   ++D A  L  +M       + + +  L+ 
Sbjct: 243 ALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLD 302

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPD 365
           G+ R+ +  +  +L  +M  K  +PD
Sbjct: 303 GYCRLGRIEEAKQLFKEMAAKSCLPD 328



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 200/376 (53%), Gaps = 12/376 (3%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C PN VTY++++ GLCK G +D+A  LF +M  +   P+VVTY +LIHGLC A+  +
Sbjct: 217 GRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVD 276

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A+ L  EM         V++N ++D  C+ G+++EA +L   M  +   P+  TY+ L+
Sbjct: 277 AARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLV 336

Query: 129 DGFCLTGKINRAEELFGSMES-MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
            GFC   ++  A  L  +M++  G   D V+Y+I++ GY + K   EA    +EM+++ +
Sbjct: 337 RGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNV 396

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P  VTY++L  GL +  +V HA+++ + + + DV     TY   I+GLC      EA+ 
Sbjct: 397 APNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKPDVV----TYTIVIEGLCGTDRTEEALT 452

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +   + E  +  +N +I  LC+ G ++ A +L  ++    L   +VTY  ++ G  
Sbjct: 453 LLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFS 512

Query: 308 NDGQMDKAHDLFLDMEENA----VAPNVI---IFVTLIHGFVRINKPSKVIELLHKMKEK 360
             G+M+ A++LF  M   A     A N++    F  LI G  +  +  K + ++ +++ +
Sbjct: 513 RTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSR 572

Query: 361 KVMPDASIVSMVVDLL 376
           +  P       +VD L
Sbjct: 573 ECEPAEEDCLAIVDGL 588



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/285 (35%), Positives = 161/285 (56%), Gaps = 5/285 (1%)

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ-RDVRPNAFTYSTLMDGFCLTGK 136
           M + V P+  T+NV+++ LCK     +A  +L  M   + V P+  TYST+++GFC  G+
Sbjct: 1   MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60

Query: 137 INRAEELFGSMESM-GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           ++RA E+   M +  G   D V+Y  +++G C++ +++ A  + REM  KG++P   T++
Sbjct: 61  MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
            L  G     +V+ ALKL++E+       D  + +  I GLC+   I EA ELF+ + + 
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180

Query: 256 K---CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           +    + D+  Y  LIDG CKSG LE A+++   +  R  V +VVTY+ ++HGLC  G +
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 240

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           D+A DLF  M      PNV+ + TLIHG    +K      L+ +M
Sbjct: 241 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEM 285



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 165/321 (51%), Gaps = 47/321 (14%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +TV+YN ++DG C+ G +++AK LF +M  ++  PD +TY  L+ G C+A+   EA+
Sbjct: 290 CPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEAR 349

Query: 72  RLFFEM-MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            L   M    G+ P VVT+++++    +  +  EA+  +  M+ R+V PNA TYS+L+DG
Sbjct: 350 FLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDG 409

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK----- 185
            C  G++N A E+  +++    K D V+Y I+I G C     EEAL+L  EMV+K     
Sbjct: 410 LCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPS 465

Query: 186 ------------------------------GIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
                                         G++P +VTY TL  G     ++E A +LFE
Sbjct: 466 VGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFE 525

Query: 216 EMQRDDVAADTST-------YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLI 268
            M+R    + ++        ++  I GLCK   I +A+ +   L   +CE   +    ++
Sbjct: 526 VMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIV 585

Query: 269 DGLCKSGRLEIALELFRSLPR 289
           DGL ++GR E A +L  S+ +
Sbjct: 586 DGLLRAGRTEEAGKLINSISK 606



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 83/157 (52%), Gaps = 2/157 (1%)

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC-ELDIQAYNCLIDGLCKSGRL 277
           R+ VA +  TYN  ++GLCK     +A E+ + +   K    D+  Y+ +I+G CK G +
Sbjct: 2   REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEM 61

Query: 278 EIALELFRSL-PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           + A E+ R +  R  +  DVVTY  ++ GLC DG+MD+A ++  +M+   V P+   F  
Sbjct: 62  DRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSA 121

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           LI G+    K  + ++L  ++       DA   S ++
Sbjct: 122 LITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALI 158



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 42/181 (23%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY  +I+GLC     ++A  L  +M  + + P V T+NS+I  LC   D +EA +
Sbjct: 428 KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWK 487

Query: 73  LFFEMMDQGVQPSVVT------------------------------------------FN 90
           L   M   G++P +VT                                          F+
Sbjct: 488 LLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFS 547

Query: 91  VIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
            ++  LCK  ++D+A  +++ +  R+  P       ++DG    G+   A +L  S+  +
Sbjct: 548 ALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKV 607

Query: 151 G 151
           G
Sbjct: 608 G 608


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/364 (35%), Positives = 205/364 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY T+I  LC+ G +D A   F QM  + + PD   Y+ LI G C      +AK 
Sbjct: 428 KPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKE 487

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  E+M+ G++  +V F  I++ LCK G++ +A  + DL V   + P+A  Y+ LMDG+C
Sbjct: 488 LISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYC 547

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK+ +A  +F +M S G + + V Y  L+NGYCK   ++E LSL+REM+ KGIKP+ +
Sbjct: 548 LVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTI 607

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN +  GLFE  +   A   F EM    +A +  TY+  + GL KN    EA+ LF+ L
Sbjct: 608 LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKEL 667

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  ++DI   N +I G+ ++ R+E A +LF S+ R  LV   VTY+IMI  L  +G +
Sbjct: 668 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLV 727

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A D+F  M+     P+  +   ++   ++ N+  +    L K+ E+    +     ++
Sbjct: 728 EEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLL 787

Query: 373 VDLL 376
           VDL 
Sbjct: 788 VDLF 791



 Score =  227 bits (579), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 131/406 (32%), Positives = 206/406 (50%), Gaps = 35/406 (8%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
            E G VC P+ V YNT+IDG  KEG V+KA  LF +M    I PD+VTY+S++H LC A 
Sbjct: 211 AEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKAR 270

Query: 66  -----------------------------------DWNEAKRLFFEMMDQGVQPSVVTFN 90
                                               W EA R+F EM  Q + P VV  N
Sbjct: 271 AMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALN 330

Query: 91  VIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
            +M  LCK GK+ EA  + D M  +   P+ F+Y+ +++G+   G +    +LF  M   
Sbjct: 331 TLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGD 390

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G   D  ++N+LI  Y     +++A+ ++ EM   G+KP VVTY T+   L  I +++ A
Sbjct: 391 GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDA 450

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           ++ F +M    V  D   Y+  I G C +G +++A EL   +      LDI  +  +I+ 
Sbjct: 451 MEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINN 510

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LCK GR+  A  +F       L  D V YN+++ G C  G+M+KA  +F  M    + PN
Sbjct: 511 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 570

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           V+ + TL++G+ +I +  + + L  +M +K + P   + ++++D L
Sbjct: 571 VVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 616



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 176/385 (45%), Gaps = 38/385 (9%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           V  P + TY  ++D   +    + A A F Q+    +  D +  + L+ G C A   +EA
Sbjct: 108 VLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEA 167

Query: 71  KRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV--RPNAFTYSTL 127
             +      + G  P V ++N+++  LC  GK  +A  LL +M +      P+   Y+T+
Sbjct: 168 LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTV 227

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DGF   G +N+A +LF  M   G   D V+Y+ +++  CK + +++A +  R+MV+KG+
Sbjct: 228 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 287

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P   TYN L  G     Q + A+++F+EM+R  +  D    NT +  LCK G I EA +
Sbjct: 288 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARD 347

Query: 248 LFRTLGILKCELDIQAY-----------------------------------NCLIDGLC 272
           +F T+ +     D+ +Y                                   N LI    
Sbjct: 348 VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYA 407

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
             G L+ A+ +F  +    +   VVTY  +I  LC  G+MD A + F  M +  V P+  
Sbjct: 408 NCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKY 467

Query: 333 IFVTLIHGFVRINKPSKVIELLHKM 357
            +  LI GF       K  EL+ ++
Sbjct: 468 AYHCLIQGFCTHGSLLKAKELISEI 492



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 173/360 (48%), Gaps = 44/360 (12%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           ++P   TY  L+     A+    A   F +++  G++   +  + ++   C+  + DEA 
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEA- 167

Query: 107 RLLDLMVQRDVR----PNAFTYSTLMDGFCLTGKINRAEELFGSMESMG--CKHDDVSYN 160
             LD+++ R       P+ F+Y+ L+   C  GK  +A++L   M   G  C  D V+YN
Sbjct: 168 --LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYN 225

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVV---------------------------- 192
            +I+G+ K  +V +A  L++EMV +GI P +V                            
Sbjct: 226 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNK 285

Query: 193 -------TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
                  TYN L  G     Q + A+++F+EM+R  +  D    NT +  LCK G I EA
Sbjct: 286 GVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEA 345

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            ++F T+ +     D+ +Y  +++G    G L    +LF  +    +  D+ T+N++I  
Sbjct: 346 RDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKA 405

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             N G +DKA  +F +M ++ V P+V+ ++T+I    RI K    +E  ++M ++ V+PD
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 117/238 (49%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V   P+ V YN ++DG C  G ++KA  +F  M    I P+VV Y +L++G C     
Sbjct: 528 VNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRI 587

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +E   LF EM+ +G++PS + +N+I+D L + G+   A      M +  +  N  TYS +
Sbjct: 588 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 647

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G       + A  LF  + +M  K D ++ N +I G  + + VEEA  L+  +   G+
Sbjct: 648 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 707

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            P  VTY+ +   L +   VE A  +F  MQ      D+   N  +  L K   IV A
Sbjct: 708 VPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 765



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 126/292 (43%), Gaps = 44/292 (15%)

Query: 115 RDVRPNAFTYSTLMD-----------------------------------GFCLTGKINR 139
           R + P ++TY+ LMD                                   GFC   + + 
Sbjct: 107 RVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDE 166

Query: 140 AEE-LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI--KPTVVTYNT 196
           A + L      +GC  D  SYNIL+   C   +  +A  L R M   G    P VV YNT
Sbjct: 167 ALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNT 226

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---G 253
           +  G F+   V  A  LF+EM +  +  D  TY++ +  LCK   + +A    R +   G
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +L    D   YN LI G   +G+ + A+ +F+ + R+ ++ DVV  N ++  LC  G++ 
Sbjct: 287 VLP---DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIK 343

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A D+F  M      P+V  +  +++G+        + +L   M    + PD
Sbjct: 344 EARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 395



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 114/237 (48%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V Y T+++G CK G +D+  +LF +M  + I P  + YN +I GL  A     AK 
Sbjct: 568 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM + G+  +  T+++++  L KN   DEA  L   +   +V+ +  T +T++ G  
Sbjct: 628 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 687

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            T ++  A++LF S+   G     V+Y+I+I    K   VEEA  ++  M + G +P   
Sbjct: 688 QTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSR 747

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             N +   L + +++  A     ++   + + +  T    +D     G   E +   
Sbjct: 748 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 125/365 (34%), Positives = 195/365 (53%), Gaps = 3/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYN II+G+C+EG VD AK +  ++      PD+V+Y +++ GLC A  W++ K
Sbjct: 218 CTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVK 277

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+D+   P+ VTF++++   C+ G ++ A ++L  M Q    PN    + +++  
Sbjct: 278 VLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAI 337

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A +   +M   GC  D +SY  ++ G C+    E A  L  EMV K   P  
Sbjct: 338 CKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNE 397

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NT    L +   +E A+KL E M     +    TYN  + G C  G +  A+ELF  
Sbjct: 398 VTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNN 457

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L    CE +   Y  L+ GLC + RL+ A EL   + ++    + VT+N+++   C  G 
Sbjct: 458 L---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGF 514

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A +L   M E+   PN+I F TL+ G  +     + +ELLH +  K V  D    S 
Sbjct: 515 VEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSS 574

Query: 372 VVDLL 376
           VVD+L
Sbjct: 575 VVDVL 579



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 169/331 (51%), Gaps = 3/331 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNT   N +I+ +CK+G VD A      M     NPD ++Y +++ GLC A  W  AK
Sbjct: 323 CTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAK 382

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+ +   P+ VTFN  +  LC+ G +++A +L++LM +        TY+ L+ GF
Sbjct: 383 ELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGF 442

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C+ G+++ A ELF ++    C+ + ++Y  L+ G C  + ++ A  L  EM+ K      
Sbjct: 443 CVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNA 499

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+N L     +   VE A++L  +M       +  T+NT +DG+ K+    EA+EL   
Sbjct: 500 VTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHG 559

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L      LD   Y+ ++D L +  R E A+++  ++    +   V  YN ++  LC   +
Sbjct: 560 LVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCE 619

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
            D+A D F  M  N   PN   ++ LI G  
Sbjct: 620 TDQAIDFFAYMVSNGCMPNESTYIILIEGLA 650



 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 179/365 (49%), Gaps = 3/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VT++ ++   C+ G V++A  +  QM      P+    N +I+ +C     ++A 
Sbjct: 288 CVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAY 347

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                M   G  P  +++  ++  LC+ G+ + A  LL  MV+++  PN  T++T +   
Sbjct: 348 DFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICIL 407

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I +A +L   M   GC    V+YN L++G+C    V+ AL L+  +     +P  
Sbjct: 408 CQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNT 464

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY TL  GL    +++ A +L  EM + D   +  T+N  +   C+ G++ EA+EL   
Sbjct: 465 ITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQ 524

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  ++  +N L+DG+ K    E ALEL   L  + +  D +TY+ ++  L  + +
Sbjct: 525 MMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDR 584

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            ++A  +   +++  + P V ++  ++    +  +  + I+    M     MP+ S   +
Sbjct: 585 TEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYII 644

Query: 372 VVDLL 376
           +++ L
Sbjct: 645 LIEGL 649



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 149/282 (52%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+ +G QPSVVT+ V+++ +CK+    EA  +LD M  +   PN  TY+ +++G C  G+
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           ++ A+E+   + S G + D VSY  ++ G C  +  ++   L+ EMV K   P  VT++ 
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L         VE A+++ ++M +     +T+  N  I+ +CK G + +A +    +G+  
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
           C  D  +Y  ++ GLC++GR E A EL   + R+    + VT+N  I  LC  G +++A 
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
            L   M E   +  ++ +  L+HGF    +    +EL + + 
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP 459



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 106/206 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PNT+TY T++ GLC    +D A  L  +M  ++   + VT+N L+   C      EA 
Sbjct: 460 CEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAM 519

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +MM+ G  P+++TFN ++D + K+   +EA  LL  +V + V  +  TYS+++D  
Sbjct: 520 ELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVL 579

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +   A ++  +++ MG +     YN ++   CK  E ++A+  +  MVS G  P  
Sbjct: 580 SREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNE 639

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEM 217
            TY  L  GL     ++ A  +  E+
Sbjct: 640 STYIILIEGLAHEGLLKEARYVLSEL 665



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 1/248 (0%)

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
           RP   T +    G   T + +       +M   GC+   V+Y +L+   CK+    EA++
Sbjct: 150 RPTP-TPTRPSSGASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMN 208

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           +  EM +KG  P +VTYN +  G+    +V+ A ++   +       D  +Y T + GLC
Sbjct: 209 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLC 268

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
                 +   LF  +   KC  +   ++ L+   C+ G +E A+++ + + +     +  
Sbjct: 269 AARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTT 328

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
             NI+I+ +C  G++D A+D   +M      P+ I + T++ G  R  +     ELL +M
Sbjct: 329 LCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEM 388

Query: 358 KEKKVMPD 365
             K   P+
Sbjct: 389 VRKNCPPN 396



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 76/149 (51%)

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           TY   ++ +CK+    EA+ +   +    C  +I  YN +I+G+C+ GR++ A E+   L
Sbjct: 189 TYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRL 248

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
                  D+V+Y  ++ GLC   + D    LF +M +    PN + F  L+  F R    
Sbjct: 249 SSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMV 308

Query: 348 SKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            + I++L +M +    P+ ++ ++V++ +
Sbjct: 309 ERAIQVLQQMSQHGCTPNTTLCNIVINAI 337


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 126/355 (35%), Positives = 205/355 (57%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + + + V Y+TIID +CK+  V+ A  L+ +M    I+ ++VTY++LI G C      
Sbjct: 203 GKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLK 262

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  LF +M  + + P V TFN+++D  CK G++ EA   L +M+++ ++P+  TY++LM
Sbjct: 263 DAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLM 322

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+CL  ++N A+ +  +M   G      SYNI+ING+CK K V++A+ L++EM  K I 
Sbjct: 323 DGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIF 382

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P V+TYN+L  GL +  ++ +AL+L + M       D  TY++ +D LCKN  + +A+ L
Sbjct: 383 PNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIAL 442

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              L       ++  Y  LIDGLCK GRLE A  +F  L  +     V TY +MI G C+
Sbjct: 443 LIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCS 502

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            G  D+A  L   M++N+  P+ I +  +I      ++  K  +LL +M  + ++
Sbjct: 503 HGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLL 557



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 199/359 (55%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + V+Y T+I+GLCK G    A  L  ++ G+ +  DVV Y+++I  +C   + N+A  L+
Sbjct: 174 DQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLY 233

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ + +  ++VT++ ++   C  GK+ +A  L + M   ++ P+ +T++ L+D FC  
Sbjct: 234 SEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKE 293

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G++  A+     M   G K D V+YN L++GYC   EV  A S+   M  +G+  TV +Y
Sbjct: 294 GRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSY 353

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N +  G  +I  V+ A+KLF+EM    +  +  TYN+ IDGLCK+G I  A+EL   +  
Sbjct: 354 NIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHD 413

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + DI  Y+ ++D LCK+  ++ A+ L   L  + +  ++ TY I+I GLC  G+++ 
Sbjct: 414 RGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLED 473

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A ++F D+        V  +  +I GF       + + LL KMK+   +PDA    +++
Sbjct: 474 ARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIII 532



 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/331 (34%), Positives = 183/331 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+T+T NT I G C +G + +A     ++     + D V+Y +LI+GLC   +   A  
Sbjct: 137 EPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALE 196

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   +  + VQ  VV ++ I+D +CK+  +++A  L   MV R +  N  TYS L+ GFC
Sbjct: 197 LLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFC 256

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + GK+  A  LF  M S     D  ++NIL++ +CK   V+EA +    M+ +GIKP +V
Sbjct: 257 IVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIV 316

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  G   +++V  A  +   M    V A   +YN  I+G CK   + +A++LF+ +
Sbjct: 317 TYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEM 376

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   ++  YN LIDGLCKSGR+  ALEL   +  R    D++TY+ ++  LC +  +
Sbjct: 377 HHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLV 436

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           DKA  L + +++  + PN+  +  LI G  +
Sbjct: 437 DKAIALLIKLKDQGIRPNMYTYTILIDGLCK 467



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 180/363 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  + +  I+  L K        +LF +M+   I P+ V +N LI+  C       A  +
Sbjct: 68  PPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSV 127

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G +P  +T N  +   C  G++ +A    D +V      +  +Y TL++G C 
Sbjct: 128 LAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCK 187

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A EL   ++    + D V Y+ +I+  CK+K V +A  LY EMVS+ I   +VT
Sbjct: 188 VGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVT 247

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  G   + +++ A+ LF +M  +++  D  T+N  +D  CK G + EA      + 
Sbjct: 248 YSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMM 307

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + DI  YN L+DG C    + +A  +  ++  R + A V +YNI+I+G C    +D
Sbjct: 308 KQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVD 367

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  LF +M    + PNVI + +LI G  +  + S  +EL+  M ++   PD    S ++
Sbjct: 368 QAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSIL 427

Query: 374 DLL 376
           D L
Sbjct: 428 DAL 430



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 188/362 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V +N +I+  C+ G +  A ++  ++      PD +T N+ I G C     ++A  
Sbjct: 102 KPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALN 161

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +++  G     V++  +++ LCK G+   A  LL  +  + V+ +   YST++D  C
Sbjct: 162 FHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMC 221

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +N A +L+  M S     + V+Y+ LI+G+C   ++++A+ L+ +M S+ I P V 
Sbjct: 222 KDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVY 281

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N L     +  +V+ A      M +  +  D  TYN+ +DG C    +  A  +  T+
Sbjct: 282 TFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTM 341

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   +++YN +I+G CK   ++ A++LF+ +  + +  +V+TYN +I GLC  G++
Sbjct: 342 SHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRI 401

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A +L   M +    P++I + +++    + +   K I LL K+K++ + P+    +++
Sbjct: 402 SYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTIL 461

Query: 373 VD 374
           +D
Sbjct: 462 ID 463



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 154/286 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+N ++D  CKEG V +AK     M  + I PD+VTYNSL+ G C  N+ N AK +
Sbjct: 278 PDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSI 337

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +GV  +V ++N++++  CK   +D+A +L   M  + + PN  TY++L+DG C 
Sbjct: 338 LNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCK 397

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G+I+ A EL   M   G + D ++Y+ +++  CKN  V++A++L  ++  +GI+P + T
Sbjct: 398 SGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYT 457

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +  ++E A  +FE++         +TY   I G C +G   EA+ L   + 
Sbjct: 458 YTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMK 517

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
              C  D   Y  +I  L      + A +L R +  R L+   + Y
Sbjct: 518 DNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEY 563



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 155/310 (50%)

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
           ND  +A  LF  ++ Q   P  + F  I+  L K+        L   M  R ++PN   +
Sbjct: 49  NDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNF 108

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + L++ FC  G I  A  +   +  MG + D ++ N  I G+C   ++ +AL+ + ++V+
Sbjct: 109 NILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVA 168

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
            G     V+Y TL  GL ++ +   AL+L   +    V  D   Y+T ID +CK+  + +
Sbjct: 169 LGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVND 228

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A +L+  +   +   +I  Y+ LI G C  G+L+ A+ LF  +    +  DV T+NI++ 
Sbjct: 229 AFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVD 288

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
             C +G++ +A +    M +  + P+++ + +L+ G+  +N+ +    +L+ M  + V  
Sbjct: 289 AFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTA 348

Query: 365 DASIVSMVVD 374
                ++V++
Sbjct: 349 TVRSYNIVIN 358



 Score =  130 bits (327), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 147/324 (45%), Gaps = 31/324 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +TYN++IDGLCK G +  A  L   M      PD++TY+S++  LC  +  ++A  L
Sbjct: 383 PNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIAL 442

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++ DQG++P++ T+ +++D LCK G++++A  + + ++ +       TY+ ++ GFC 
Sbjct: 443 LIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCS 502

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A  L   M+   C  D ++Y I+I       E ++A  L REM+++G+  + + 
Sbjct: 503 HGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLE 562

Query: 194 YNTLFLGLF--EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG-LCKNGYIVEAVELFR 250
           Y +  L       H + +        Q     A       + D  L K+    + VE   
Sbjct: 563 YGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPS 622

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C+   Q Y                            + DV TY +MI G C+ G
Sbjct: 623 VIIYSTCDWSKQGY----------------------------ILDVNTYTVMIQGFCSHG 654

Query: 311 QMDKAHDLFLDMEENAVAPNVIIF 334
             D++  L   ME N   P+ + +
Sbjct: 655 LFDESLALLSKMEVNGCIPDAVTY 678



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 134/276 (48%)

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           N  + +A  L + +++++  P    +  ++     +   +    LF  ME  G K + V+
Sbjct: 48  NNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVN 107

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +NILIN +C+   +  A S+  +++  G +P  +T NT   G     Q+  AL   +++ 
Sbjct: 108 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLV 167

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                 D  +Y T I+GLCK G    A+EL R +     +LD+  Y+ +ID +CK   + 
Sbjct: 168 ALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVN 227

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +L+  +  R + +++VTY+ +I G C  G++  A  LF  M    + P+V  F  L+
Sbjct: 228 DAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILV 287

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             F +  +  +    L  M ++ + PD    + ++D
Sbjct: 288 DAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMD 323



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 129/300 (43%), Gaps = 49/300 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ +TY++I+D LCK   VDKA AL +++K + I P++ TY  LI GLC      +A+ 
Sbjct: 417 QPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARN 476

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +++ +G   +V T+ V++   C +G  DEA  LL  M      P+A TY  ++    
Sbjct: 477 IFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLF 536

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSY------------NILINGYCKNKEVEEALSLYR 180
              + ++AE+L   M + G  +  + Y            + L N   +    +E+ +  +
Sbjct: 537 DKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAK 596

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            ++ +     V+T +                     M+  DV   +    +  D   K G
Sbjct: 597 LLLERIYCDCVLTKS--------------------NMRDKDVECPSVIIYSTCD-WSKQG 635

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
           YI                LD+  Y  +I G C  G  + +L L   +     + D VTY+
Sbjct: 636 YI----------------LDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/398 (33%), Positives = 210/398 (52%), Gaps = 35/398 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N V+Y  +I GLC+ G VD+   +F +M+ ++  P V TY  ++H L  +    EA 
Sbjct: 35  CRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAI 94

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM ++G +P++ T+ V+++ +CK  K++E  R+LD MV++ + P+  TY+ L+DG+
Sbjct: 95  NLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGY 154

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A+E+   M S  C  ++ +YN LI G+C+ K V  A++L  +M+   + P+V
Sbjct: 155 CKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSV 214

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN+L  G  +I  ++ A +L   M  + V  D  TY+ FID LCK G I EA  LF +
Sbjct: 215 VTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNS 274

Query: 252 L-----------------GILK------------------CELDIQAYNCLIDGLCKSGR 276
           L                 G  K                  C  +   YN LIDGLCK  +
Sbjct: 275 LKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERK 334

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           ++ AL L  S+ ++ L   V TY I+I  +  +G  D AH +   M  +   P+V I+  
Sbjct: 335 VQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTA 394

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            IH F       +  +++  M E+ VMPDA   ++V+D
Sbjct: 395 FIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVID 432



 Score =  193 bits (491), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 191/417 (45%), Gaps = 64/417 (15%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TYN +I G C++  V +A AL  +M    + P VVTYNSLIHG C     + A 
Sbjct: 175 CNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAY 234

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL   M + GV P   T++V +D LCK G+++EA+ L + + ++ ++ N   Y+ L+DG+
Sbjct: 235 RLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGY 294

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK++ A  L   M +  C  +  +YN LI+G CK ++V+EAL L   M+ KG+K TV
Sbjct: 295 CKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTV 354

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA------ 245
            TY  L + + +    ++A ++ ++M       D   Y  FI   C  G I EA      
Sbjct: 355 PTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSM 414

Query: 246 ----------------VELFRTLGILKCELDI-------------QAYNCLID------- 269
                           ++ +  LG+L    D+               Y+CLI        
Sbjct: 415 MFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEEL 474

Query: 270 -------GLCKS---------------GRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
                   LC S                + E ALELF  +       ++ TY  +I GLC
Sbjct: 475 TKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLC 534

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
             G++  A  LF  M E  V+P+  I+ +L++    +      + L+  M E   +P
Sbjct: 535 KVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLP 591



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 176/400 (44%), Gaps = 35/400 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P   TY  I+  L + G   +A  LF +M+     P++ TY  +I+ +C      E +
Sbjct: 70  CYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGR 129

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R+  EM+++G+ PSV T+N ++D  CK G ++ A  +LDLM      PN  TY+ L+ GF
Sbjct: 130 RILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGF 189

Query: 132 CLTGKINRAEELFGSM-ESM----------------------------------GCKHDD 156
           C    ++RA  L   M ES                                   G   D 
Sbjct: 190 CRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQ 249

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            +Y++ I+  CK   +EEA  L+  +  KGIK   V Y  L  G  +  +++ A  L + 
Sbjct: 250 WTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDR 309

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M  +D   ++STYN  IDGLCK   + EA+ L  ++     +  +  Y  LI  + K G 
Sbjct: 310 MLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGD 369

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
            + A  +   +       DV  Y   IH  C  G + +A D+   M E  V P+ + +  
Sbjct: 370 FDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTL 429

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +I  +  +   +   ++L +M +    P     S ++  L
Sbjct: 430 VIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHL 469



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 157/312 (50%)

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
           ND N A  +F  M  +G + + V++  ++  LC+ G++DE   +   M + D  P   TY
Sbjct: 18  NDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTY 77

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + ++     +G+   A  LF  M   GC+ +  +Y ++IN  CK  ++EE   +  EMV 
Sbjct: 78  TVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVE 137

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           KG+ P+V TYN L  G  +   VE A ++ + M  +    +  TYN  I G C+   +  
Sbjct: 138 KGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHR 197

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A+ L   +   +    +  YN LI G CK G L+ A  L   +    +V D  TY++ I 
Sbjct: 198 AMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFID 257

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            LC  G++++A+ LF  ++E  +  N +I+  LI G+ +  K      LL +M  +  +P
Sbjct: 258 TLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLP 317

Query: 365 DASIVSMVVDLL 376
           ++S  + ++D L
Sbjct: 318 NSSTYNALIDGL 329



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 163/362 (45%), Gaps = 35/362 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN+ TYN +IDGLCKE  V +A  L   M  + +   V TY  LI  +    D++ A 
Sbjct: 315 CLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAH 374

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R+  +M+  G QP V  +   +   C  G + EA  ++ +M +R V P+A TY+ ++D +
Sbjct: 375 RILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAY 434

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK--------------------- 170
              G +N A ++   M   GC     +Y+ LI    K +                     
Sbjct: 435 GGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFAD 494

Query: 171 --------EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
                   + E AL L+ +M+  G  P + TY  L +GL ++ ++  A KLF+ M    V
Sbjct: 495 VADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGV 554

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCKSGRLEI 279
           +   + YN+ ++  C+ G   +AV L   +   G L     +++ N L  GL + G  E 
Sbjct: 555 SPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPL---LESLNVLFCGLYEEGSKEK 611

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A  +F +L +     D V + I+I GL  +G  D   +L   ME      +   +  LI 
Sbjct: 612 AKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIE 671

Query: 340 GF 341
           G 
Sbjct: 672 GL 673



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 132/276 (47%)

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           N  ++ A  + ++M ++  R N  +Y+ L+ G C  G+++    +F  M    C     +
Sbjct: 17  NNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRT 76

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y ++++   ++    EA++L+ EM  +G +P + TY  +   + +  ++E   ++ +EM 
Sbjct: 77  YTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV 136

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +     TYN  IDG CK G +  A E+   +    C  + + YN LI G C+   + 
Sbjct: 137 EKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVH 196

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A+ L   +    L   VVTYN +IHG C  G +D A+ L   M EN V P+   +   I
Sbjct: 197 RAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFI 256

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
               +  +  +   L + +KEK +  +  I + ++D
Sbjct: 257 DTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALID 292



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 124/259 (47%), Gaps = 9/259 (3%)

Query: 127 LMDGFC---------LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
           +++G+C         L   +N A  +F  M   GC+ ++VSY  LI+G C+   V+E ++
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           ++++M      PTV TY  +   LFE  +   A+ LF EM+      +  TY   I+ +C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           K   + E   +   +        +  YN LIDG CK G +E A E+   +       +  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           TYN +I G C    + +A  L   M E+ + P+V+ + +LIHG  +I        LL+ M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 358 KEKKVMPDASIVSMVVDLL 376
            E  V+PD    S+ +D L
Sbjct: 241 NENGVVPDQWTYSVFIDTL 259


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 202/352 (57%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+N ++  LCK+GFV +++ LF ++    + P++ T+N  I GLC     + A RL
Sbjct: 293 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRL 352

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              +  +G++P VVT+N ++  LC+  ++ EA   L  MV     PN FTY++++DG+C 
Sbjct: 353 LGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCK 412

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A  +       G K D+ +Y  L+NG+C++ + ++A++++++ + KG++P+++ 
Sbjct: 413 KGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIV 472

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL +   +  AL+L  EM       D  TYN  I+GLCK G + +A  L     
Sbjct: 473 YNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAI 532

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  DI  YN L+DG C+  +L+ A+EL   +  + +  DV+TYN +++GLC   + +
Sbjct: 533 TKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSE 592

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +  ++F  M E   APN+I + T+I       K ++ ++LL +MK K + PD
Sbjct: 593 EVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPD 644



 Score =  224 bits (570), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 121/350 (34%), Positives = 194/350 (55%), Gaps = 1/350 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC PN  T+N  I GLCKEG +D+A  L   +  E + PDVVTYN++I GLC  +   EA
Sbjct: 326 VC-PNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEA 384

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           +    +M++ G +P+  T+N I+D  CK G + +A+R+L   V +  +P+ FTY +L++G
Sbjct: 385 EECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNG 444

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC  G  ++A  +F      G +   + YN LI G C+   +  AL L  EM  KG KP 
Sbjct: 445 FCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPD 504

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           + TYN +  GL ++  +  A  L  +        D  TYNT +DG C+   +  A+EL  
Sbjct: 505 IWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVN 564

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +       D+  YN L++GLCK+ + E  +E+F+++  +    +++TYN +I  LCN  
Sbjct: 565 RMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSK 624

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           ++++A DL  +M+   + P+V+ F TLI GF ++        L   M+++
Sbjct: 625 KVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQ 674



 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/377 (32%), Positives = 203/377 (53%), Gaps = 7/377 (1%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M NG  E      PN  TYN+IIDG CK+G V  A  +      +   PD  TY SL++G
Sbjct: 391 MVNGGFE------PNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNG 444

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
            C   D ++A  +F + + +G++PS++ +N ++  LC+ G +  A +L++ M ++  +P+
Sbjct: 445 FCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPD 504

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
            +TY+ +++G C  G ++ A  L G   + GC  D  +YN L++GYC+  +++ A+ L  
Sbjct: 505 IWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVN 564

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            M S+G+ P V+TYNTL  GL +  + E  +++F+ M     A +  TYNT I+ LC + 
Sbjct: 565 RMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSK 624

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA-DVVTY 299
            + EAV+L   +       D+ ++  LI G CK G L+ A  LFR + ++  V+    TY
Sbjct: 625 KVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATY 684

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           NI+I        M  A  LF +M++N   P+   +  LI GF +    ++  + L +  E
Sbjct: 685 NIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIE 744

Query: 360 KKVMPDASIVSMVVDLL 376
           K  +P  +    V++ L
Sbjct: 745 KGFIPSLTTFGRVLNCL 761



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 196/358 (54%), Gaps = 7/358 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY ++++G C++G  D+A A+F    G+ + P ++ YN+LI GLC       A +
Sbjct: 432 KPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQ 491

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM ++G +P + T+N+I++ LCK G + +A+ L+   + +   P+ FTY+TL+DG+C
Sbjct: 492 LMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYC 551

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K++ A EL   M S G   D ++YN L+NG CK  + EE + +++ M  KG  P ++
Sbjct: 552 RQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNII 611

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNT+   L    +V  A+ L  EM+   +  D  ++ T I G CK G +  A  LFR  
Sbjct: 612 TYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFR-- 669

Query: 253 GILKCELDIQ----AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           G+ K + D+      YN +I    +   +++AL LF  + +     D  TY ++I G C 
Sbjct: 670 GMEK-QYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCK 728

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            G +++ +   L+  E    P++  F  +++     +K  + + ++H M +K ++PD 
Sbjct: 729 TGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDT 786



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 175/326 (53%), Gaps = 1/326 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G   +P+ + YNT+I GLC++G +  A  L  +M  +   PD+ TYN +I+GLC     
Sbjct: 462 LGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCL 521

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  L  + + +G  P + T+N ++D  C+  K+D A  L++ M  + + P+  TY+TL
Sbjct: 522 SDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTL 581

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++G C T K     E+F +M   GC  + ++YN +I   C +K+V EA+ L  EM SKG+
Sbjct: 582 LNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGL 641

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAV 246
            P VV++ TL  G  ++  ++ A  LF  M++  DV+  T+TYN  I    +   +  A+
Sbjct: 642 TPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMAL 701

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            LF  +    C+ D   Y  LIDG CK+G +    +       +  +  + T+  +++ L
Sbjct: 702 RLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCL 761

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVI 332
           C + ++ +A  +   M +  + P+ +
Sbjct: 762 CVEHKVQEAVGIIHLMVQKDIVPDTV 787



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 178/389 (45%), Gaps = 35/389 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  +YN I++ L + G+ ++A  ++++MK + +  DV TY   I   C       A 
Sbjct: 186 CDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAAL 245

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL   M   G   + V +  ++    + G  D A  L D M++  + P+  T++ L+   
Sbjct: 246 RLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHAL 305

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  +E LF  +   G   +  ++NI I G CK   ++ A+ L   +  +G++P V
Sbjct: 306 CKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDV 365

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL--- 248
           VTYNT+  GL    +V  A +   +M       +  TYN+ IDG CK G +V+A  +   
Sbjct: 366 VTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKD 425

Query: 249 -----FRTLGILKCEL---------------------------DIQAYNCLIDGLCKSGR 276
                F+      C L                            I  YN LI GLC+ G 
Sbjct: 426 AVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGL 485

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +  AL+L   +  +    D+ TYN++I+GLC  G +  A+ L  D       P++  + T
Sbjct: 486 ILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNT 545

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           L+ G+ R  K    IEL+++M  + + PD
Sbjct: 546 LVDGYCRQLKLDSAIELVNRMWSQGMTPD 574



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 187/412 (45%), Gaps = 60/412 (14%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K    TY +++  L   G  ++ + L  +M+    N D    N+L+ G+     + EA R
Sbjct: 116 KHTLFTYKSMLQKLGFHGKFNEMENLLSEMRS---NLD----NTLLEGV-----YVEAMR 163

Query: 73  LF------------FEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
            +            FE MD     PSV ++N IM+ L + G  ++A ++   M  + V  
Sbjct: 164 FYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVES 223

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           + +TY+  +  FC TG+   A  L  +M  +GC  + V+Y  ++ G+ +  + + A  L+
Sbjct: 224 DVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELF 283

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            EM+   + P V T+N L   L +   V  + +LF+++ +  V  +  T+N FI GLCK 
Sbjct: 284 DEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKE 343

Query: 240 GYIVEAVELFRTL-----------------GILKCELDIQA------------------Y 264
           G +  AV L   +                 G+ +    ++A                  Y
Sbjct: 344 GSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTY 403

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
           N +IDG CK G +  A  + +    +    D  TY  +++G C DG  D+A  +F D   
Sbjct: 404 NSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLG 463

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             + P++I++ TLI G  +       ++L+++M EK   PD    +++++ L
Sbjct: 464 KGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGL 515



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 84/195 (43%), Gaps = 1/195 (0%)

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTFIDGLCKNGY 241
             +G K T+ TY ++   L    +      L  EM+ + D       Y   +    + G 
Sbjct: 111 TKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGK 170

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           I EAV+ F  + +  C+  + +YN +++ L + G    A +++  +  + + +DV TY I
Sbjct: 171 IQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTI 230

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
            I   C  G+   A  L  +M       N + + T++ GF       +  EL  +M E  
Sbjct: 231 RIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECC 290

Query: 362 VMPDASIVSMVVDLL 376
           + PD +  + +V  L
Sbjct: 291 LCPDVTTFNKLVHAL 305


>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 952

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 122/330 (36%), Positives = 192/330 (58%), Gaps = 15/330 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM---KGENINPDVVTYNSLIHGLCHANDWN 68
           C PN  +YN +++GLC E    +A  L   M   +G    PDVV+Y ++I+G     D +
Sbjct: 154 CIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSD 213

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMD------------EASRLLDLMVQRD 116
           +A   + EM+D+G+ P VVT++ I+  LCK   MD            E+ +L DLMV+  
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIG 273

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           V+P+  TYSTL+DG+CL GK++ A +L   M S+G K + V+Y+ LINGYCK   +E+AL
Sbjct: 274 VKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 333

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            L++EM S G+ P ++TYN +  GLF+  +   A +L+  +       + STYN  + GL
Sbjct: 334 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 393

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           CKN    +A+++F+ L ++  +L+ + +N +ID L K GR + A +LF +     LV + 
Sbjct: 394 CKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNY 453

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
            TY +M   +   G +++   LFL ME+N 
Sbjct: 454 WTYRLMAENIIGQGLLEELDQLFLSMEDNG 483



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 190/411 (46%), Gaps = 51/411 (12%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSL---------------- 57
           P+  TY  +I   C+ G +D   A    +  +    + +T+  L                
Sbjct: 85  PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 58  --------------------IHGLCHANDWNEAKRLFFEMMDQ---GVQPSVVTFNVIMD 94
                               ++GLC  N   EA  L   M D    G  P VV++  +++
Sbjct: 145 VLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF------------CLTGKINRAEE 142
              K G  D+A      M+ R + P+  TYS+++               C  G++  +E+
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEK 264

Query: 143 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 202
           LF  M  +G K D ++Y+ LI+GYC   +++EA+ L   MVS G+KP  VTY+TL  G  
Sbjct: 265 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 324

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ 262
           +I ++E AL LF+EM+   V+ D  TYN  + GL +      A EL+  +     ++++ 
Sbjct: 325 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 384

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
            YN ++ GLCK+   + AL++F++L    L  +  T+NIMI  L   G+ D+A DLF+  
Sbjct: 385 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 444

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
             N + PN   +  +    +      ++ +L   M++     D+ +++ +V
Sbjct: 445 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 495



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 171/352 (48%), Gaps = 22/352 (6%)

Query: 44  GENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMD 103
            + + PD+ TY  LI   C A   +        ++ +G +   +TF  ++  LC + +  
Sbjct: 80  ADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTS 139

Query: 104 EASRLLDLMVQRDVR----PNAFTYSTLMDGFCLTGKINRAEELFGSM---ESMGCKHDD 156
           +A   +D++++R       PN F+Y+ L++G C   +   A EL   M      G   D 
Sbjct: 140 DA---MDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDV 196

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL----- 211
           VSY  +ING+ K  + ++A S Y EM+ +GI P VVTY+++   L +   ++        
Sbjct: 197 VSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKE 256

Query: 212 -------KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
                  KLF+ M R  V  D  TY+T IDG C  G + EA++L   +  +  + +   Y
Sbjct: 257 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 316

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
           + LI+G CK  R+E AL LF+ +    +  D++TYNI++ GL    +   A +L++ + E
Sbjct: 317 STLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 376

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +     +  +  ++HG  +       +++   +    +  +A   ++++D L
Sbjct: 377 SGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 428



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 150/309 (48%), Gaps = 47/309 (15%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN----DWN- 68
           P+ V+Y T+I+G  KEG  DKA + + +M    I PDVVTY+S+I  LC        W+ 
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSH 253

Query: 69  -------EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNA 121
                  E+++LF  M+  GV+P ++T++ ++D  C  GKMDEA +LL  MV   ++PN 
Sbjct: 254 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNT 313

Query: 122 FTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILI------------------ 163
            TYSTL++G+C   ++  A  LF  MES G   D ++YNI++                  
Sbjct: 314 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 373

Query: 164 -----------------NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
                            +G CKNK  ++AL +++ +    +K    T+N +   L ++ +
Sbjct: 374 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 433

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
            + A  LF     + +  +  TY    + +   G + E  +LF ++    C +D    N 
Sbjct: 434 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 493

Query: 267 LIDGLCKSG 275
           ++  L + G
Sbjct: 494 IVRELLQRG 502



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 127/264 (48%), Gaps = 7/264 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            IGV  KP+ +TY+T+IDG C  G +D+A  L   M    + P+ VTY++LI+G C  + 
Sbjct: 271 RIGV--KPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 328

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A  LF EM   GV P ++T+N+I+  L +  +   A  L   + +   +    TY+ 
Sbjct: 329 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 388

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ G C     + A ++F ++  M  K +  ++NI+I+   K    +EA  L+    S G
Sbjct: 389 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 448

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV--- 243
           + P   TY  +   +     +E   +LF  M+ +    D+   N  +  L + G +V   
Sbjct: 449 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGVVVVVS 508

Query: 244 --EAVELFRTLGILKCELDIQAYN 265
              A     TL IL C + +  ++
Sbjct: 509 GESATTPPPTLKILTCGITVNPFS 532



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 98/182 (53%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           +G + V  KPNTVTY+T+I+G CK   ++ A  LF +M+   ++PD++TYN ++ GL   
Sbjct: 302 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 361

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
                AK L+  + + G Q  + T+N+I+  LCKN   D+A ++   +   D++  A T+
Sbjct: 362 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 421

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + ++D     G+ + A++LF +  S G   +  +Y ++         +EE   L+  M  
Sbjct: 422 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 481

Query: 185 KG 186
            G
Sbjct: 482 NG 483


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 127/366 (34%), Positives = 198/366 (54%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G   K N V Y+ +ID LC+ GFVD+    + +M G  + P+  TY SLI GLC    + 
Sbjct: 178 GFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFL 237

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           E   L  EM+ +G+  SV  F V++D LCKNG + EA  + D MV R   PN  T + LM
Sbjct: 238 EGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALM 297

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G+CL G ++ A ELF ++   G K D  +YN+ I+GYCK   V +A+ ++ EM  +G+ 
Sbjct: 298 GGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVV 357

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P +VTYN+L   L +  +V  A ++ + M R  +  D  T    +DGLCK+  + +A+ L
Sbjct: 358 PNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILL 417

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  L       D+ +Y  LI G C S R+  A+ L R +  + LV  +VTY+ +I GLC 
Sbjct: 418 FNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCR 477

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G++  A  L  +M      P+ I +  L+    +     + + L ++M ++ + PD   
Sbjct: 478 SGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMC 537

Query: 369 VSMVVD 374
            ++++D
Sbjct: 538 YTIMID 543



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 194/370 (52%), Gaps = 8/370 (2%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMK--------GENINPDVVTYNSLIHGLCHAND 66
           N V+Y  +I+GLC+ G V++A  L   ++        G  +  +VV Y+ +I  LC    
Sbjct: 141 NEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGF 200

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            +E    + EMM  GV P+  T+  ++  LC  GK  E   L+D M++R +  + + ++ 
Sbjct: 201 VDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTV 260

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+DG C  G +  A E+F  M + G + + V+   L+ GYC    V+ A  L+  +   G
Sbjct: 261 LIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWG 320

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            K  V TYN    G  ++ +V  A+++F+EM R+ V  +  TYN+ ID LCK G +  A 
Sbjct: 321 FKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAW 380

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           E+ +T+       DI     L+DGLCKS RL+ A+ LF  L    L  DV +Y I+IHG 
Sbjct: 381 EIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGC 440

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C   +M +A +L  DM    + P+++ +  LI G  R  + S    LL++M  K  +PD 
Sbjct: 441 CTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDT 500

Query: 367 SIVSMVVDLL 376
              S+++D L
Sbjct: 501 ITYSILLDAL 510



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 108/299 (36%), Positives = 166/299 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VT   ++ G C +G VD A+ LF  +       DV TYN  IHG C      +A R
Sbjct: 287 EPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVR 346

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM  +GV P++VT+N ++D LCK G++  A  ++  M +  + P+  T   L+DG C
Sbjct: 347 VFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLC 406

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            + ++++A  LF  +   G   D  SY ILI+G C ++ + EA++L R+M  K + P +V
Sbjct: 407 KSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIV 466

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L  GL    ++ +A +L  EM       DT TY+  +D L K  ++ EAV LF  +
Sbjct: 467 TYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQM 526

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                E D+  Y  +IDG CKS R++ A+ LFR +  + LV D+VTY I+ + +   G 
Sbjct: 527 IKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGS 585



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 185/352 (52%), Gaps = 16/352 (4%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           +  +IDGLCK G + +A+ +F +M      P++VT  +L+ G C   + + A+ LF  + 
Sbjct: 258 FTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIG 317

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           + G +  V T+NV +   CK G++ +A R+ D M +  V PN  TY++L+D  C  G+++
Sbjct: 318 EWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVS 377

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A E+  +M   G   D V+  IL++G CK+K +++A+ L+ ++V  G+ P V +Y  L 
Sbjct: 378 GAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILI 437

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            G     ++  A+ L  +M   ++     TY+  IDGLC++G I  A  L   + +    
Sbjct: 438 HGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPL 497

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            D   Y+ L+D L K   L+ A+ LF  + +R L  DV+ Y IMI G C   ++D+A +L
Sbjct: 498 PDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINL 557

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVR----------------INKPSKVIELL 354
           F +M    + P+++ +  L +   +                IN P +V++ L
Sbjct: 558 FREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKYL 609



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 148/312 (47%), Gaps = 8/312 (2%)

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +++ +G     V  N ++  LC NG + +A    D +V      N  +Y  L++G C
Sbjct: 94  IFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLC 153

Query: 133 LTGKINRAEELF--------GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
             G++N A  L            +    K + V Y+I+I+  C+N  V+E    Y EM+ 
Sbjct: 154 ENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMG 213

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
            G+ P   TY +L  GL  + +      L +EM R  +      +   IDGLCKNG +VE
Sbjct: 214 NGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVE 273

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A E+F  +     E +I     L+ G C  G +++A ELF ++       DV TYN+ IH
Sbjct: 274 AREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIH 333

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G C  G++  A  +F +M    V PN++ + +LI    +  + S   E++  M    + P
Sbjct: 334 GYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTP 393

Query: 365 DASIVSMVVDLL 376
           D     +++D L
Sbjct: 394 DIVTCCILLDGL 405



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 92/184 (50%), Gaps = 8/184 (4%)

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
            F +  V  +  +F ++ +     DT   NT + GLC NG +++A+E    +      L+
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRR--------VLVADVVTYNIMIHGLCNDGQM 312
             +Y  LI+GLC++GR+  A+ L R + +          +  +VV Y+I+I  LC +G +
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+  + + +M  N V PN   + +LI G   + K  +   L+ +M  + +     + +++
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261

Query: 373 VDLL 376
           +D L
Sbjct: 262 IDGL 265



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 62/106 (58%), Gaps = 2/106 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T+TY+ ++D L K+  +D+A  LF QM    + PDV+ Y  +I G C +   +EA  L
Sbjct: 498 PDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINL 557

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
           F EM  + + P +VT+ ++ + + K+G      + ++++  RD+ P
Sbjct: 558 FREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVI--RDINP 601


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 127/352 (36%), Positives = 195/352 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+N ++D   + G V+ A AL   M  + I P +VTYNS++ GL     W++A+ +
Sbjct: 192 PDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREV 251

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   GV P V +FN+++   C+ G+++EA R    M  R V P+  ++S L+  F  
Sbjct: 252 FRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTR 311

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A E    M   G   D V Y ++I G+C+   + EAL +  EMV+ G  P VVT
Sbjct: 312 RGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVT 371

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL +  ++  A +L  EM+   V  D  T+ T I G C++G I +A++ F T+ 
Sbjct: 372 YNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTIS 431

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +   DI  YN LIDG+C+ G L  A EL+  +  R +  + VTY+I+I   C  GQ+D
Sbjct: 432 DQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVD 491

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            A     +M    + PN++ + ++I G+ R    SK  + L KM+  KVMPD
Sbjct: 492 NAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPD 543



 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 195/361 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VTYN+++ GL + G  DKA+ +F  M    + PDV ++N LI G C A +  EA R
Sbjct: 226 KPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALR 285

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            + EM  + V P VV+F+ ++    + G+MD A+  L  M +  + P+   Y+ ++ GFC
Sbjct: 286 FYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFC 345

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  +   M + GC  D V+YN L+NG CK + + +A  L  EM  +G+ P + 
Sbjct: 346 RAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLC 405

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+ TL  G      +E AL+ F+ +    +  D  TYNT IDG+C+ G + +A EL+  +
Sbjct: 406 TFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDM 465

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   +   Y+ LID  C+ G+++ A      +  + +V +++TYN +I G C  G +
Sbjct: 466 HSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNV 525

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            K       M  + V P++I + TLIHG+V+  K  +   LL  M+ + V PDA   +M+
Sbjct: 526 SKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMI 585

Query: 373 V 373
           +
Sbjct: 586 I 586



 Score =  200 bits (508), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 181/330 (54%), Gaps = 4/330 (1%)

Query: 48  NPDVVTY--NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA 105
           N +V TY  N ++H  C    + E   +  EM  + V P VVT NV++D   + G ++ A
Sbjct: 154 NSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAA 213

Query: 106 SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILING 165
             L+D MV + ++P   TY++++ G    G+ ++A E+F +M++ G   D  S+N+LI G
Sbjct: 214 MALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGG 273

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH-QVEHALKLFEEMQRDDVAA 224
           +C+  E+EEAL  Y+EM  + + P VV+++ L +GLF    +++HA +   EM+   +  
Sbjct: 274 FCRAGELEEALRFYKEMRGRRVTPDVVSFSCL-IGLFTRRGEMDHAAEYLREMREFGLMP 332

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           D   Y   I G C+ G ++EA+ +   +    C  D+  YN L++GLCK  RL  A EL 
Sbjct: 333 DGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELL 392

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
             +  R +  D+ T+  +IHG C DG ++KA   F  + +  + P+++ + TLI G  R 
Sbjct: 393 NEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQ 452

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
               K  EL   M  +++ P+    S+++D
Sbjct: 453 GDLGKANELWDDMHSREIFPNHVTYSILID 482



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 185/357 (51%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G    P+ V+++ +I    + G +D A     +M+   + PD V Y  +I G C A    
Sbjct: 292 GRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLML 351

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA R+  EM+  G  P VVT+N +++ LCK  ++ +A  LL+ M +R V P+  T++TL+
Sbjct: 352 EALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLI 411

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G+C  G I +A + F ++     + D V+YN LI+G C+  ++ +A  L+ +M S+ I 
Sbjct: 412 HGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIF 471

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  VTY+ L     E  QV++A    +EM    +  +  TYN+ I G C++G + +  + 
Sbjct: 472 PNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQF 531

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +   K   D+  YN LI G  K G++  A  L + +    +  D VTYN++I G   
Sbjct: 532 LPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSV 591

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            G M +A  ++  M    + P+   ++++I+G V      K  +L  +M +K + PD
Sbjct: 592 HGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/362 (24%), Positives = 166/362 (45%), Gaps = 35/362 (9%)

Query: 48  NPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR 107
            P    ++ LI     +    EA   F  ++D  V       N ++  L + G     + 
Sbjct: 86  TPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTAD 145

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
              L++  +   N +T + ++  +C T +    + +   ME      D V++N++++   
Sbjct: 146 AYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARF 205

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           +  +VE A++L   MVSKGIKP +VTYN++  GL    + + A ++F  M    VA D  
Sbjct: 206 RAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVR 265

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS- 286
           ++N  I G C+ G + EA+  ++ +   +   D+ +++CLI    + G ++ A E  R  
Sbjct: 266 SFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREM 325

Query: 287 -----LPRRVL-----------------------------VADVVTYNIMIHGLCNDGQM 312
                +P  V+                             + DVVTYN +++GLC + ++
Sbjct: 326 REFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRL 385

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A +L  +M+E  V P++  F TLIHG+ R     K ++    + ++++ PD    + +
Sbjct: 386 SDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTL 445

Query: 373 VD 374
           +D
Sbjct: 446 ID 447



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 79/143 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +TYN+II G C+ G V K +    +M+ + + PD++TYN+LIHG       +EA  L
Sbjct: 507 PNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNL 566

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M ++ VQP  VT+N+I+     +G M EA  +   M  R + P+ +TY ++++G  +
Sbjct: 567 LKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVV 626

Query: 134 TGKINRAEELFGSMESMGCKHDD 156
            G   ++ +L   M   G   DD
Sbjct: 627 AGNSKKSFQLHDEMLQKGLAPDD 649



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 98/218 (44%)

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +++LI  Y ++++  EA   +R ++   +       N L   L            +  + 
Sbjct: 92  FDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTADAYRLVL 151

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
             +   +T T N  +   CK     E   +   +       D+  +N ++D   ++G +E
Sbjct: 152 SSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVE 211

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A+ L  S+  + +   +VTYN ++ GL  +G+ DKA ++F  M+   VAP+V  F  LI
Sbjct: 212 AAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLI 271

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            GF R  +  + +    +M+ ++V PD    S ++ L 
Sbjct: 272 GGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLF 309


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/350 (38%), Positives = 204/350 (58%), Gaps = 9/350 (2%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + +PN V YNTIID LCK   V +A  LF +M  + I+ +VVTY+++IHG C      
Sbjct: 196 GRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLT 255

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA     EM+ + + P V  +N ++D L K GK+ EA  +L ++V+  ++PN  TY+TL+
Sbjct: 256 EALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLI 315

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+        A+ +F ++  MG   D  SYNI+IN  CK K VEEAL+LY+EM  K + 
Sbjct: 316 DGY--------AKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMV 367

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  VTYN+L  GL +  ++ +A  L +EM      A+  TYN+ I+GLCKNG + +A+ L
Sbjct: 368 PNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIAL 427

Query: 249 FRTLGILKCELDIQAYNCLIDG-LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
              +     + D+   N L+ G LCK  RL+ A  LF+ L  +    +V TYNI+I+G C
Sbjct: 428 INKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHC 487

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            +G +D+A+ L   ME++  +PN I F  +I   +   +  K  +LL +M
Sbjct: 488 KEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEM 537



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 196/389 (50%), Gaps = 28/389 (7%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+TVT  T+I GLC +G V KA     ++  +    D V+Y +LI+G+C   +   A +
Sbjct: 130 QPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQ 189

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   +  +  +P+VV +N I+D LCK   + EA  L   M  + +  N  TYS ++ GFC
Sbjct: 190 LLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFC 249

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + GK+  A      M       D   YN L++   K  +V+EA ++   +V   +KP V+
Sbjct: 250 IVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVI 309

Query: 193 TYNTLFLG---------------------------LFEIHQVEHALKLFEEMQRDDVAAD 225
           TYNTL  G                           L +I +VE AL L++EM + ++  +
Sbjct: 310 TYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPN 369

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
           T TYN+ IDGLCK+G I  A +L   +       ++  YN LI+GLCK+G+L+ A+ L  
Sbjct: 370 TVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALIN 429

Query: 286 SLPRRVLVADVVTYNIMIHG-LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
            +  + +  D+ T NI++HG LC   ++  A  LF D+ +    PNV  +  +I+G  + 
Sbjct: 430 KMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKE 489

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVV 373
               +   L  KM++    P+A    +++
Sbjct: 490 GLLDEAYALQSKMEDSGCSPNAITFKIII 518



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 193/361 (53%), Gaps = 8/361 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  T N +I+  C  G ++ A ++  ++      PD VT  +LI GLC      +A  
Sbjct: 95  QPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALH 154

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +++ QG +   V++  +++ +CK G+   A +LL  +  R   PN   Y+T++D  C
Sbjct: 155 FHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLC 214

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               ++ A  LF  M   G   + V+Y+ +I+G+C   ++ EAL    EMV K I P V 
Sbjct: 215 KRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVY 274

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YNTL   L +  +V+ A  +   + +  +  +  TYNT IDG  K+        +F  +
Sbjct: 275 IYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKH--------VFNAV 326

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           G++    D+ +YN +I+ LCK  R+E AL L++ + ++ +V + VTYN +I GLC  G++
Sbjct: 327 GLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRI 386

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A DL  +M +     NVI + +LI+G  +  +  K I L++KMK++ + PD   ++++
Sbjct: 387 SYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNIL 446

Query: 373 V 373
           +
Sbjct: 447 L 447



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 155/281 (55%), Gaps = 9/281 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   YNT++D L KEG V +AK +   +    + P+V+TYN+LI G         AK +
Sbjct: 271 PDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--------AKHV 322

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  +   GV P V ++N++++ LCK  +++EA  L   M Q+++ PN  TY++L+DG C 
Sbjct: 323 FNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCK 382

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G+I+ A +L   M   G   + ++YN LING CKN ++++A++L  +M  +GI+P + T
Sbjct: 383 SGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYT 442

Query: 194 YNTLFLGLF-EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            N L  GL  +  ++++A  LF+++       +  TYN  I G CK G + EA  L   +
Sbjct: 443 LNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKM 502

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
               C  +   +  +I  L + G  + A +L   +  R L+
Sbjct: 503 EDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGLL 543



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 167/356 (46%), Gaps = 27/356 (7%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           VD A   F +M      P ++ +N ++        +     L   +  + +QP   T N+
Sbjct: 44  VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C  G+++ A  +L  +++   +P+  T +TL+ G CL G++ +A      + + G
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            + D VSY  LING CK  E   A+ L R +  +  +P VV YNT+   L +   V  A 
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            LF EM    ++A+  TY+  I G C  G + EA+     + +     D+  YN L+D L
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283

Query: 272 CKSGRLE---------------------------IALELFRSLPRRVLVADVVTYNIMIH 304
            K G+++                            A  +F ++    +  DV +YNIMI+
Sbjct: 284 HKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMIN 343

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            LC   ++++A +L+ +M +  + PN + + +LI G  +  + S   +L+ +M ++
Sbjct: 344 RLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDR 399



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 110/220 (50%)

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           + +N +++ + K K     +SL R +  K I+P   T N L      + Q+  A  +  +
Sbjct: 64  IQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSK 123

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           + +     DT T  T I GLC  G + +A+     L      LD  +Y  LI+G+CK G 
Sbjct: 124 ILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGE 183

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
              A++L R +  R+   +VV YN +I  LC    + +A +LF +M    ++ NV+ +  
Sbjct: 184 TRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSA 243

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +IHGF  + K ++ +  L++M  K + PD  I + +VD L
Sbjct: 244 IIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 123/256 (48%)

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           P    ++ ++D F           L   +E    + D  + NILIN +C   ++  A S+
Sbjct: 61  PPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSV 120

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
             +++  G +P  VT  TL  GL    QV+ AL   +++       D  +Y T I+G+CK
Sbjct: 121 LSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCK 180

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
            G    A++L R +     E ++  YN +ID LCK   +  A  LF  +  + + A+VVT
Sbjct: 181 IGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVT 240

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y+ +IHG C  G++ +A     +M   A+ P+V I+ TL+    +  K  +   +L  + 
Sbjct: 241 YSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIV 300

Query: 359 EKKVMPDASIVSMVVD 374
           +  + P+    + ++D
Sbjct: 301 KTCLKPNVITYNTLID 316


>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
          Length = 861

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 122/330 (36%), Positives = 192/330 (58%), Gaps = 15/330 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM---KGENINPDVVTYNSLIHGLCHANDWN 68
           C PN  +YN +++GLC E    +A  L   M   +G    PDVV+Y ++I+G     D +
Sbjct: 154 CIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSD 213

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMD------------EASRLLDLMVQRD 116
           +A   + EM+D+G+ P VVT++ I+  LCK   MD            E+ +L DLMV+  
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIG 273

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           V+P+  TYSTL+DG+CL GK++ A +L   M S+G K + V+Y+ LINGYCK   +E+AL
Sbjct: 274 VKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 333

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            L++EM S G+ P ++TYN +  GLF+  +   A +L+  +       + STYN  + GL
Sbjct: 334 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 393

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           CKN    +A+++F+ L ++  +L+ + +N +ID L K GR + A +LF +     LV + 
Sbjct: 394 CKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNY 453

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
            TY +M   +   G +++   LFL ME+N 
Sbjct: 454 WTYRLMAENIIGQGLLEELDQLFLSMEDNG 483



 Score =  164 bits (414), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 190/411 (46%), Gaps = 51/411 (12%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSL---------------- 57
           P+  TY  +I   C+ G +D   A    +  +    + +T+  L                
Sbjct: 85  PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 58  --------------------IHGLCHANDWNEAKRLFFEMMDQ---GVQPSVVTFNVIMD 94
                               ++GLC  N   EA  L   M D    G  P VV++  +++
Sbjct: 145 VLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF------------CLTGKINRAEE 142
              K G  D+A      M+ R + P+  TYS+++               C  G++  +E+
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEK 264

Query: 143 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 202
           LF  M  +G K D ++Y+ LI+GYC   +++EA+ L   MVS G+KP  VTY+TL  G  
Sbjct: 265 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 324

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ 262
           +I ++E AL LF+EM+   V+ D  TYN  + GL +      A EL+  +     ++++ 
Sbjct: 325 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 384

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
            YN ++ GLCK+   + AL++F++L    L  +  T+NIMI  L   G+ D+A DLF+  
Sbjct: 385 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 444

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
             N + PN   +  +    +      ++ +L   M++     D+ +++ +V
Sbjct: 445 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 495



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 171/351 (48%), Gaps = 22/351 (6%)

Query: 45  ENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDE 104
           + + PD+ TY  LI   C A   +        ++ +G +   +TF  ++  LC + +  +
Sbjct: 81  DEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSD 140

Query: 105 ASRLLDLMVQRDVR----PNAFTYSTLMDGFCLTGKINRAEELFGSM---ESMGCKHDDV 157
           A   +D++++R       PN F+Y+ L++G C   +   A EL   M      G   D V
Sbjct: 141 A---MDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVV 197

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL------ 211
           SY  +ING+ K  + ++A S Y EM+ +GI P VVTY+++   L +   ++         
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEG 257

Query: 212 ------KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYN 265
                 KLF+ M R  V  D  TY+T IDG C  G + EA++L   +  +  + +   Y+
Sbjct: 258 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 317

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
            LI+G CK  R+E AL LF+ +    +  D++TYNI++ GL    +   A +L++ + E+
Sbjct: 318 TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES 377

Query: 326 AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                +  +  ++HG  +       +++   +    +  +A   ++++D L
Sbjct: 378 GTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 428



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 112/227 (49%), Gaps = 2/227 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            IGV  KP+ +TY+T+IDG C  G +D+A  L   M    + P+ VTY++LI+G C  + 
Sbjct: 271 RIGV--KPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 328

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A  LF EM   GV P ++T+N+I+  L +  +   A  L   + +   +    TY+ 
Sbjct: 329 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 388

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ G C     + A ++F ++  M  K +  ++NI+I+   K    +EA  L+    S G
Sbjct: 389 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 448

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           + P   TY  +   +     +E   +LF  M+ +    D+   N  +
Sbjct: 449 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 495



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 98/182 (53%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           +G + V  KPNTVTY+T+I+G CK   ++ A  LF +M+   ++PD++TYN ++ GL   
Sbjct: 302 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 361

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
                AK L+  + + G Q  + T+N+I+  LCKN   D+A ++   +   D++  A T+
Sbjct: 362 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 421

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + ++D     G+ + A++LF +  S G   +  +Y ++         +EE   L+  M  
Sbjct: 422 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 481

Query: 185 KG 186
            G
Sbjct: 482 NG 483



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 36/81 (44%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T+N +ID L K G  D+AK LF+      + P+  TY  +   +       E  +LF  M
Sbjct: 420 TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM 479

Query: 78  MDQGVQPSVVTFNVIMDELCK 98
            D G        N I+ EL +
Sbjct: 480 EDNGCTVDSGMLNFIVRELLQ 500


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/361 (36%), Positives = 192/361 (53%), Gaps = 1/361 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYN II  LCKE  VD+A  +   +  + I PDV T+NSLI GLC +++   A 
Sbjct: 374 CSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAM 433

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM  +G +P   T+N+++D LC + K++EA  LL  M       N   Y+TL+DGF
Sbjct: 434 DLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGF 493

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +I  AEE+F  ME  G   D V+YN LI+G CK+K VE+A  L  +M+ +G++P  
Sbjct: 494 CKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDK 553

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN+L     +   ++ A  + + M       D  TY T I GLCK G +  A  L R+
Sbjct: 554 FTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRS 613

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN-DG 310
           + +    L   AYN +I  L K  R   A+ LFR +  +    D +TY I+  GLCN  G
Sbjct: 614 IQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGG 673

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            + +A D  ++M E    P    FV L  G   ++    +++L+  + EK    +  I +
Sbjct: 674 PIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKAKFSEREIST 733

Query: 371 M 371
           +
Sbjct: 734 I 734



 Score =  230 bits (586), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 118/360 (32%), Positives = 202/360 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TYNT+++GLCK G    A  +   M    ++PD+ TYNSLI GLC   +  EA +
Sbjct: 305 RPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVK 364

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M+ +   P+ VT+N I+  LCK  ++DEA+ +  L+  + + P+  T+++L+ G C
Sbjct: 365 ILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLC 424

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L+     A +LF  M+  GC+ D+ +YN+LI+  C ++++EEAL+L +EM   G    VV
Sbjct: 425 LSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVV 484

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YNTL  G  +  ++E A ++F+EM+   V+ D+ TYNT IDGLCK+  + +A +L   +
Sbjct: 485 IYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQM 544

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +     D   YN L+   CK+G ++ A ++ +++       D+VTY  +I GLC  G++
Sbjct: 545 IMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRV 604

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A  L   ++   +      +  +I    + N+  + + L  +M +K   PDA    +V
Sbjct: 605 QVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIV 664



 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 122/349 (34%), Positives = 184/349 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C    VT N +I+G CK+G +D+A +   +   E   PD  TYN+L++GLC       A 
Sbjct: 269 CPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAM 328

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   M+  G+ P + T+N ++  LCK G+++EA ++LD MV RD  PNA TY+ ++   
Sbjct: 329 EVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSL 388

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +++ A E+   + S G   D  ++N LI G C +   + A+ L+ EM  KG +P  
Sbjct: 389 CKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDE 448

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN L   L    ++E AL L +EM+ +  A +   YNT IDG CKN  I EA E+F  
Sbjct: 449 FTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDE 508

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +     D   YN LIDGLCKS R+E A +L   +    L  D  TYN ++   C  G 
Sbjct: 509 MELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGD 568

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           + KA D+   M  +   P+++ + TLI G  +  +      LL  ++ K
Sbjct: 569 IKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMK 617



 Score =  224 bits (571), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 198/364 (54%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN++I GLCK G +++A  +  QM   + +P+ VTYN++I  LC  N  +EA  +
Sbjct: 341 PDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEI 400

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              +  +G+ P V TFN ++  LC +     A  L + M  +  RP+ FTY+ L+D  C 
Sbjct: 401 ARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCS 460

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           + K+  A  L   ME  GC  + V YN LI+G+CKNK +EEA  ++ EM  +G+    VT
Sbjct: 461 SRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVT 520

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL +  +VE A +L ++M  + +  D  TYN+ +   CK G I +A ++ +T+ 
Sbjct: 521 YNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMT 580

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  DI  Y  LI GLCK+GR+++A  L RS+  + +V     YN +I  L    +  
Sbjct: 581 SSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTH 640

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP-SKVIELLHKMKEKKVMPDASIVSMV 372
           +A  LF +M + +  P+ I +  +  G      P  + ++   +M E+  +P+ S   M+
Sbjct: 641 EAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVML 700

Query: 373 VDLL 376
            + L
Sbjct: 701 AEGL 704



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 185/348 (53%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T+N +I  LCK   V  A  +  +M    ++PD  T+ +++ G     + + A R+  +M
Sbjct: 205 TFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQM 264

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           ++ G   + VT NV+++  CK G++D+A   +   V    RP+ FTY+TL++G C  G  
Sbjct: 265 VEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHA 324

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A E+  +M   G   D  +YN LI+G CK  E+EEA+ +  +MVS+   P  VTYN +
Sbjct: 325 KHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAI 384

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
              L + ++V+ A ++   +    +  D  T+N+ I GLC +     A++LF  +    C
Sbjct: 385 ISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGC 444

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D   YN LID LC S +LE AL L + +       +VV YN +I G C + ++++A +
Sbjct: 445 RPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEE 504

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +F +ME   V+ + + + TLI G  +  +     +L+ +M  + + PD
Sbjct: 505 IFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPD 552



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 191/367 (52%), Gaps = 6/367 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+T  YN +++ L     +   ++    M    I  DV T+N LI  LC A+    A  
Sbjct: 165 KPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAIL 224

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM   G+ P   TF  IM    + G +D A R+ + MV+        T + L++GFC
Sbjct: 225 MMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFC 284

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+I++A        S G + D  +YN L+NG CK    + A+ +   M+  G+ P + 
Sbjct: 285 KQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIY 344

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  GL ++ ++E A+K+ ++M   D + +  TYN  I  LCK   + EA E+ R L
Sbjct: 345 TYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLL 404

Query: 253 ---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
              GIL    D+  +N LI GLC S   + A++LF  +  +    D  TYN++I  LC+ 
Sbjct: 405 TSKGILP---DVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSS 461

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            ++++A +L  +ME N  A NV+I+ TLI GF +  +  +  E+  +M+ + V  D+   
Sbjct: 462 RKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTY 521

Query: 370 SMVVDLL 376
           + ++D L
Sbjct: 522 NTLIDGL 528



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 171/329 (51%)

Query: 46  NINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA 105
            I PD   YN L++ L  AN     +     M+ + ++  V TFN+++  LCK  ++  A
Sbjct: 163 RIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPA 222

Query: 106 SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILING 165
             +++ M    + P+  T++T+M G+   G ++ A  +   M   GC   DV+ N+LING
Sbjct: 223 ILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLING 282

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
           +CK   +++ALS  +E VS+G +P   TYNTL  GL +I   +HA+++ + M    +  D
Sbjct: 283 FCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPD 342

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
             TYN+ I GLCK G I EAV++   +    C  +   YN +I  LCK  R++ A E+ R
Sbjct: 343 IYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIAR 402

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            L  + ++ DV T+N +I GLC       A DLF +M+     P+   +  LI       
Sbjct: 403 LLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSR 462

Query: 346 KPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           K  + + LL +M+      +  I + ++D
Sbjct: 463 KLEEALNLLKEMELNGCARNVVIYNTLID 491



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 97/266 (36%), Positives = 148/266 (55%), Gaps = 3/266 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C+P+  TYN +ID LC    +++A  L  +M+      +VV YN+LI G C      
Sbjct: 441 GKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIE 500

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA+ +F EM  QGV    VT+N ++D LCK+ ++++A++L+D M+   +RP+ FTY++L+
Sbjct: 501 EAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLL 560

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
             FC TG I +A ++  +M S GC  D V+Y  LI+G CK   V+ A  L R +  KG+ 
Sbjct: 561 THFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMV 620

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK-NGYIVEAVE 247
            T   YN +   LF+ ++   A++LF EM       D  TY     GLC   G I EAV+
Sbjct: 621 LTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVD 680

Query: 248 LFRTLGILKCEL-DIQAYNCLIDGLC 272
            F    I +  + +  ++  L +GLC
Sbjct: 681 -FTVEMIERGNIPEFSSFVMLAEGLC 705



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 172/364 (47%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P++  Y  I+  L K G  +  + +  +MK      D   +   +        ++E   +
Sbjct: 95  PSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGI 154

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              M D+  ++P    +NV+++ L    K+         MV+R +R +  T++ L+   C
Sbjct: 155 VKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALC 214

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++  A  +   M S G   D+ ++  ++ GY +   ++ AL +  +MV  G   T V
Sbjct: 215 KAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDV 274

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T N L  G  +  +++ AL   +E   +    D  TYNT ++GLCK G+   A+E+   +
Sbjct: 275 TVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAM 334

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +   + DI  YN LI GLCK G +E A+++   +  R    + VTYN +I  LC + ++
Sbjct: 335 LLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRV 394

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A ++   +    + P+V  F +LI G    +     ++L  +MK K   PD    +M+
Sbjct: 395 DEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNML 454

Query: 373 VDLL 376
           +D L
Sbjct: 455 IDSL 458


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/364 (36%), Positives = 201/364 (55%), Gaps = 6/364 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTYNTII+GLCK   +     LF ++     +PDVVTYN+LI  LC A D  EA+RL
Sbjct: 79  PTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRL 138

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR--DVRPNAFTYSTLMDGF 131
              M  +G  P+VVT++V+++ LCK G++DEA  L+  M ++  DV PN  TY++ +DG 
Sbjct: 139 HGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 198

Query: 132 CLTGKINRAEELFGSME--SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           C       A EL  S+   S+    D V+++ LI+G CK  + +EA +   +M++ G  P
Sbjct: 199 CKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVP 256

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VVTYN L  GL +  ++E A  + E M    V  D  TY+  +D  CK   + EA+EL 
Sbjct: 257 NVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELL 316

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +    C  ++  +N +IDGLCKS R   A ++   +  R+LV D VT+NI+I G C  
Sbjct: 317 HGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKA 376

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G  ++A  LF +M    + P+V+ F  LI G  +  +     ++L  M    V P+    
Sbjct: 377 GNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTY 436

Query: 370 SMVV 373
           +++V
Sbjct: 437 NVLV 440



 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 204/369 (55%), Gaps = 6/369 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVTYNSLIHGLCHANDWNE 69
           C PN VTY+ +I+GLCK G +D+A+ L  +M  K  ++ P+++TYNS + GLC  +   E
Sbjct: 147 CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE 206

Query: 70  AKRLFFEMMDQG--VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           A  L   + D    V P  VTF+ ++D LCK G+ DEA    D M+     PN  TY+ L
Sbjct: 207 ACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNAL 264

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++G C   K+ RA  +  SM   G   D ++Y++L++ +CK   V+EAL L   M S+G 
Sbjct: 265 VNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGC 324

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P VVT+N++  GL +  +   A ++  ++    +  D  T+N  I G CK G   +A  
Sbjct: 325 TPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASA 384

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           LF  +     + D+  +  LIDGLCK+G++E A ++   +    +  +VVTYN+++HGLC
Sbjct: 385 LFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLC 444

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G++++  +   +M  +   P  + + +L++   R ++    ++L+ K+K     PD  
Sbjct: 445 KSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTV 504

Query: 368 IVSMVVDLL 376
             +++VD L
Sbjct: 505 TYNILVDGL 513



 Score =  223 bits (569), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 125/362 (34%), Positives = 195/362 (53%), Gaps = 2/362 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+TVT++T+IDGLCK G  D+A      M      P+VVTYN+L++GLC A+    A  
Sbjct: 222 SPDTVTFSTLIDGLCKCGQTDEA--CNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHA 279

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M+D+GV P V+T++V++D  CK  ++DEA  LL  M  R   PN  T+++++DG C
Sbjct: 280 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC 339

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            + +   A ++   + +     D V++NILI G CK    E+A +L+ EMV+K ++P V+
Sbjct: 340 KSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVM 399

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+  L  GL +  QVE A  + + M    V  +  TYN  + GLCK+G I E  E    +
Sbjct: 400 TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEM 459

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  +   Y  L+  LC++ R + AL+L   L       D VTYNI++ GL   G+ 
Sbjct: 460 VSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKT 519

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A  +  +M      P+   F     G  R    +  +ELL  +  K ++PDA+  S +
Sbjct: 520 EQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSI 579

Query: 373 VD 374
           +D
Sbjct: 580 LD 581



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 173/320 (54%), Gaps = 7/320 (2%)

Query: 51  VVTYNSLIHGLCHANDWNEAKRLFF-EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
           V  YN ++  LC A +   A  +F  EM   GV P++VT+N I++ LCK+ ++     L 
Sbjct: 45  VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 104

Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
           + +V+R   P+  TY+TL+D  C  G +  A  L G M S GC  + V+Y++LING CK 
Sbjct: 105 EELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKV 164

Query: 170 KEVEEALSLYREMVSKG--IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD--VAAD 225
             ++EA  L +EM  K   + P ++TYN+   GL +      A +L   ++     V+ D
Sbjct: 165 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 224

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
           T T++T IDGLCK G   EA       G      ++  YN L++GLCK+ ++E A  +  
Sbjct: 225 TVTFSTLIDGLCKCGQTDEACNDDMIAGGYV--PNVVTYNALVNGLCKADKMERAHAMIE 282

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
           S+  + +  DV+TY++++   C   ++D+A +L   M      PNV+ F ++I G  + +
Sbjct: 283 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSD 342

Query: 346 KPSKVIELLHKMKEKKVMPD 365
           +  +  ++  ++  + ++PD
Sbjct: 343 RSGEAFQIALQVYNRMLVPD 362



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 104/297 (35%), Positives = 166/297 (55%), Gaps = 7/297 (2%)

Query: 85  SVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-VRPNAFTYSTLMDGFCLTGKINRAEEL 143
           SV  +N+++  LC+ G+   A  +    + RD V P   TY+T+++G C + ++    EL
Sbjct: 44  SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL 103

Query: 144 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 203
           F  +   G   D V+YN LI+  CK  ++EEA  L+  M S+G  P VVTY+ L  GL +
Sbjct: 104 FEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCK 163

Query: 204 IHQVEHALKLFEEMQRD--DVAADTSTYNTFIDGLCKNGYIVEAVELFRTL--GILKCEL 259
           + +++ A +L +EM R   DV  +  TYN+F+DGLCK     EA EL R+L  G L+   
Sbjct: 164 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 223

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           D   ++ LIDGLCK G+ + A      +     V +VVTYN +++GLC   +M++AH + 
Sbjct: 224 DTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMI 281

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             M +  V P+VI +  L+  F + ++  + +ELLH M  +   P+    + ++D L
Sbjct: 282 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGL 338



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/241 (37%), Positives = 135/241 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VT+N+IIDGLCK     +A  + LQ+    + PD VT+N LI G C A ++ +A 
Sbjct: 324 CTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQAS 383

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+ + +QP V+TF  ++D LCK G+++ A  +LDLM    V PN  TY+ L+ G 
Sbjct: 384 ALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGL 443

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +G+I    E    M S GC  + ++Y  L+   C+    ++AL L  ++ S G  P  
Sbjct: 444 CKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDT 503

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN L  GL++  + E A+ + EEM       D+ T+     GL ++G +   +EL R 
Sbjct: 504 VTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRV 563

Query: 252 L 252
           +
Sbjct: 564 V 564



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 63/118 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P ++TY +++  LC+    D A  L  ++K    +PD VTYN L+ GL  +    +A 
Sbjct: 464 CVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAI 523

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
            +  EM+ +G QP   TF      L ++G +     LL +++ + + P+A T S+++D
Sbjct: 524 TVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 123/367 (33%), Positives = 207/367 (56%), Gaps = 7/367 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +TYN ++ GLC  G +  A+AL+ +M     +PDVVTYN+L+HG C   + +EA ++
Sbjct: 8   PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F   + +G  P VVT+N +++  CK  K+DEA R+L  MV  ++ P+  TY++L++G C 
Sbjct: 68  FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN-KEVEEALSLYREMVSKGIKPTVV 192
            G+++ A  L   +   G   + ++Y+ LI+G C+  + V EAL L+  ++ +G +P V 
Sbjct: 128 NGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVP 184

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L  GL +  +V  A +LF  + +  +  D  TY  FIDGLCK G + +A+ + + +
Sbjct: 185 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 244

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D+ ++N +I+GLCK  R++ A  L   +  +    + +++N +I G C  G+ 
Sbjct: 245 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKW 304

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV---IELLHKMKEKKVMPDASIV 369
            KA   F +M +  V P V+ +  L+ G  +  +  ++   I L   M EK  +PD    
Sbjct: 305 KKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTY 364

Query: 370 SMVVDLL 376
           S ++D L
Sbjct: 365 SALIDGL 371



 Score =  231 bits (588), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 129/336 (38%), Positives = 189/336 (56%), Gaps = 4/336 (1%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           M+     P+ +TYN+L+ GLC+    ++A+ L+  M+  G  P VVT+N ++   CK G+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +DEA ++ D  V+R   P+  TY+ L++GFC   K++ A+ +   M S     D V+YN 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF-EIHQVEHALKLFEEMQRD 220
           L+NG CKN  V+EA  L   +V KG  P V+TY+TL  GL  E+  V  ALKLF  + + 
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
               +  TYN  IDGL K   + EA ELF  L     E D   Y   IDGLCK+GR+E A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           L + + +  +  V DVV++N +I+GLC + ++D+A  L   ME    +PN I F TLI G
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             R  K  K +    +M ++ V P     +++VD L
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGL 333



 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 125/331 (37%), Positives = 196/331 (59%), Gaps = 9/331 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA-NDWNEAKR 72
           P+ VTYN++++GLCK G VD+A+ L +    +  +P+V+TY++LI GLC      +EA +
Sbjct: 113 PDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALK 169

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  ++ QG +P V T+N+++D L K  +++EA  L   +V+  + P+A TY+  +DG C
Sbjct: 170 LFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLC 229

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A  +   M+  GC  D VS+N +ING CK K V+EA  L   M +KG  P  +
Sbjct: 230 KAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAI 289

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK---NGYIVEAVELF 249
           ++NTL  G     + + A+  F+EM +  V     TYN  +DGLCK    G I EA+ LF
Sbjct: 290 SFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLF 349

Query: 250 RTLGILKCEL-DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
             + I K  + D+  Y+ LIDGL K+G+L+ A  L  ++  +  + +V TYN +I GLC 
Sbjct: 350 DAM-IEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCG 408

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
             ++D+A +LF+ M E    P+ I + T+I 
Sbjct: 409 LEKVDEALELFVAMVEKGCVPDTITYGTIIS 439



 Score =  227 bits (579), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 140/400 (35%), Positives = 208/400 (52%), Gaps = 44/400 (11%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT++ G CK G +D+A  +F         PDVVTYN+LI+G C A+  +EA+R+
Sbjct: 43  PDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRI 102

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC- 132
              M+ + + P VVT+N +++ LCKNG++DEA  L+   V +   PN  TYSTL+ G C 
Sbjct: 103 LQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCR 159

Query: 133 -LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            L G ++ A +LFGS+   G + +  +YNILI+G  K   V EA  L+  +V  G++P  
Sbjct: 160 ELRG-VSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDA 218

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL--- 248
           +TY     GL +  +VE AL + ++M       D  ++N  I+GLCK   + EA  L   
Sbjct: 219 ITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSG 278

Query: 249 ------------FRTLGILKCELD--------------------IQAYNCLIDGLCKS-- 274
                       F TL   +C                       +  YN L+DGLCK+  
Sbjct: 279 MEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQ 338

Query: 275 -GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
            GR++ A+ LF ++  +  V DVVTY+ +I GL   G++D A  L   ME     PNV  
Sbjct: 339 EGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYT 398

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           + +LI G   + K  + +EL   M EK  +PD      ++
Sbjct: 399 YNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 79/190 (41%), Positives = 123/190 (64%), Gaps = 3/190 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V++N +I+GLCKE  VD+A+ L   M+ +  +P+ +++N+LI G C A  W +A 
Sbjct: 249 CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAM 308

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCK---NGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
             F EM+ +GV+P+VVT+N+++D LCK    G++ EA  L D M+++   P+  TYS L+
Sbjct: 309 TTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALI 368

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG    GK++ A  L G+ME+ GC  +  +YN LI+G C  ++V+EAL L+  MV KG  
Sbjct: 369 DGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCV 428

Query: 189 PTVVTYNTLF 198
           P  +TY T+ 
Sbjct: 429 PDTITYGTII 438



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/259 (36%), Positives = 142/259 (54%), Gaps = 3/259 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P   TYN +IDGL KE  V++A  LF  +    + PD +TY   I GLC A    +A  
Sbjct: 180 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALL 239

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M ++G  P VV+ N +++ LCK  ++DEA  LL  M  +   PNA +++TL+ G C
Sbjct: 240 MLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQC 299

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE---VEEALSLYREMVSKGIKP 189
             GK  +A   F  M   G K   V+YNIL++G CK ++   ++EA++L+  M+ KG  P
Sbjct: 300 RAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP 359

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VVTY+ L  GL +  +++ A +L   M+      +  TYN+ I GLC    + EA+ELF
Sbjct: 360 DVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELF 419

Query: 250 RTLGILKCELDIQAYNCLI 268
             +    C  D   Y  +I
Sbjct: 420 VAMVEKGCVPDTITYGTII 438


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 120/353 (33%), Positives = 194/353 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTYNTI+ G C  G V+ A A+   MK + I PD  TY SLI G+C      EA +
Sbjct: 253 KPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASK 312

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM+ +G++PS V +N ++D  C  G +D AS   D M+++ + P   TY++L+    
Sbjct: 313 IFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALF 372

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  + + AE +   ++  G   D ++YNILINGYC+    ++A  L+ EM++ GIKPT  
Sbjct: 373 MEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKK 432

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY +L   L + ++++ A  LF+++  + V  D   +N  IDG C N  +  A EL + +
Sbjct: 433 TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDM 492

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +K   D   +N ++ G C+ G++E A ELF  + RR +  D +++N +I G    G +
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             A  +  +M +    P V+ +  L+ G  +  +     ELL +M  K + PD
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPD 605



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 185/359 (51%), Gaps = 2/359 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E GV+  P   T N+++    K    + A  L+ +M    I   V T+N +I+ LC    
Sbjct: 179 EKGVL--PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGK 236

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +AK     M   GV+P++VT+N I+   C +G+++ A  +L  M ++ + P++FTY +
Sbjct: 237 LKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ G C  G++  A ++F  M   G +   V YN LI+G+C    ++ A +   EM+ KG
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I PT+ TYN+L   LF   + + A  + +E+Q   ++ D  TYN  I+G C+     +A 
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAF 416

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            L   +     +   + Y  L+  L K  R++ A +LF+ +    ++ D + +N +I G 
Sbjct: 417 LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGH 476

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           C++  +  A +L  DM+   V P+ + F T++ G  R  K  +  EL  +MK + + PD
Sbjct: 477 CSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPD 535



 Score =  157 bits (397), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 164/323 (50%)

Query: 52  VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL 111
           + ++ LI   C  N  +EA   F+ M ++GV P++ T N ++    K  + + A  L   
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           M +  ++ + +T++ +++  C  GK+ +A++  G ME+ G K + V+YN +++GYC +  
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           VE A ++   M  + I+P   TY +L  G+ +  ++E A K+FEEM +  +      YNT
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            IDG C  G +  A      +        +  YN LI  L    R + A  + + +  + 
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           +  D +TYNI+I+G C      KA  L  +M  + + P    + +L+H   + N+  +  
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451

Query: 352 ELLHKMKEKKVMPDASIVSMVVD 374
           +L  K+  + V+PDA + + ++D
Sbjct: 452 DLFKKITSEGVLPDAIMFNALID 474



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 141/292 (48%)

Query: 85  SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELF 144
           S + F+ ++   C   + DEA      M ++ V P   T ++L+  F    +   A  L+
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 145 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 204
             M  +  K    ++NI+IN  CK  ++++A      M + G+KP +VTYNT+  G    
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 205 HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
            +VE A  +   M+R  +  D+ TY + I G+CK G + EA ++F  +           Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
           N LIDG C  G L++A      + ++ +   + TYN +IH L  + + D+A  +  +++E
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             ++P+ I +  LI+G+ R     K   L  +M    + P     + ++ +L
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVL 441



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 109/211 (51%), Gaps = 5/211 (2%)

Query: 135 GKINRAEELF----GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           G  N   E+F     S + +G K   + ++ LI   C     +EA   +  M  KG+ PT
Sbjct: 127 GTTNSIREIFEFLAASRDRLGFK-SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPT 185

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           + T N+L     ++++ E A  L+ EM R  + +   T+N  I+ LCK G + +A +   
Sbjct: 186 IETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVG 245

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +     + +I  YN ++ G C SGR+E A  +  ++ R+ +  D  TY  +I G+C  G
Sbjct: 246 HMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQG 305

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           ++++A  +F +M +  + P+ +I+ TLI GF
Sbjct: 306 RLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336



 Score = 45.4 bits (106), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 32/58 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           P  +TYN ++ GLCK    D A+ L  +M  + + PD  TY +LI G+   N  +E K
Sbjct: 569 PTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENK 626


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 129/350 (36%), Positives = 192/350 (54%), Gaps = 1/350 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PNTVTYNT+I  LCKE  V+ A  L   +  + + PDV T+NSLI GLC  ++   A 
Sbjct: 368 CEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAM 427

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM ++G  P   T++++++ LC   ++ EA  LL  M       N   Y+TL+DG 
Sbjct: 428 ELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGL 487

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++  AE++F  ME +G     V+YN LING CK+K VEEA  L  +M+ +G+KP  
Sbjct: 488 CKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDK 547

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY T+     +   ++ A  + + M  +    D  TY T I GLCK G +  A +L R+
Sbjct: 548 FTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRS 607

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN-DG 310
           + +    L  QAYN +I  LCK  R + A+ LFR +  +    DV+TY I+  GLCN  G
Sbjct: 608 VQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGG 667

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            + +A D  ++M E  + P    F  L  G   ++    +I+L++ + EK
Sbjct: 668 PIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEK 717



 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 120/349 (34%), Positives = 185/349 (53%), Gaps = 1/349 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TYN++I GLCK G +D+A  +   M   +  P+ VTYN+LI  LC  N    A  L   +
Sbjct: 339 TYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVL 398

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
             +GV P V TFN ++  LC     + A  L + M ++   P+ FTYS L++  C   ++
Sbjct: 399 TSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRL 458

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A  L   ME  GC  + V YN LI+G CKN  V +A  ++ +M   G+  + VTYNTL
Sbjct: 459 KEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTL 518

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL +  +VE A +L ++M  + +  D  TY T +   C+ G I  A ++ + + +  C
Sbjct: 519 INGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGC 578

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           E DI  Y  LI GLCK+GR+++A +L RS+  + +V     YN +I  LC   +  +A  
Sbjct: 579 EPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMR 638

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKP-SKVIELLHKMKEKKVMPD 365
           LF +M E    P+VI +  +  G      P  + ++   +M EK ++P+
Sbjct: 639 LFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPE 687



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/357 (33%), Positives = 187/357 (52%), Gaps = 4/357 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+  +V+ N +++GLCKEG +++A     + +G    PD VT+N+L++GLC      +  
Sbjct: 265 CELTSVSVNVLVNGLCKEGRIEEALRFIYEEEG--FCPDQVTFNALVNGLCRTGHIKQGL 322

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   M+++G +  V T+N ++  LCK G++DEA  +L  MV RD  PN  TY+TL+   
Sbjct: 323 EMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTL 382

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    +  A EL   + S G   D  ++N LI G C     E A+ L+ EM  KG  P  
Sbjct: 383 CKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDE 442

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY+ L   L    +++ AL L +EM+    A +   YNT IDGLCKN  + +A ++F  
Sbjct: 443 FTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQ 502

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +L        YN LI+GLCKS R+E A +L   +    L  D  TY  M+   C  G 
Sbjct: 503 MEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGD 562

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH--KMKEKKVMPDA 366
           + +A D+  +M  N   P+++ + TLI G  +  +     +LL   +MK   + P A
Sbjct: 563 IKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQA 619



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 180/346 (52%), Gaps = 2/346 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+T  YN  +  L K   +   + L  +M  + + PDV T+N LI  LC A+    A  
Sbjct: 161 KPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAIL 220

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M + G++P   TF  +M    +   ++ A R+ +LMV+      + + + L++G C
Sbjct: 221 MLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLC 280

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+I  A       E  G   D V++N L+NG C+   +++ L +   M+ KG +  V 
Sbjct: 281 KEGRIEEALRFI--YEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVY 338

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  GL ++ +++ A+++   M   D   +T TYNT I  LCK  ++  A EL R L
Sbjct: 339 TYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVL 398

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D+  +N LI GLC +   EIA+ELF  +  +    D  TY+I+I  LC++ ++
Sbjct: 399 TSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRL 458

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
            +A  L  +ME +  A NV+++ TLI G  + N+     ++  +M+
Sbjct: 459 KEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQME 504



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/323 (33%), Positives = 161/323 (49%), Gaps = 3/323 (0%)

Query: 37  ALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDE 95
            LFL M+ +  + PD   YN  +  L  AN     + L  +M+   V P V TFN+++  
Sbjct: 149 PLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRA 208

Query: 96  LCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHD 155
           LCK  ++  A  +L+ M    +RP+  T++TLM GF     +  A  +   M   GC+  
Sbjct: 209 LCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELT 268

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
            VS N+L+NG CK   +EEAL    E   +G  P  VT+N L  GL     ++  L++ +
Sbjct: 269 SVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMD 326

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
            M       D  TYN+ I GLCK G I EAVE+   +    CE +   YN LI  LCK  
Sbjct: 327 FMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKEN 386

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
            +E A EL R L  + ++ DV T+N +I GLC     + A +LF +M+E    P+   + 
Sbjct: 387 HVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYS 446

Query: 336 TLIHGFVRINKPSKVIELLHKMK 358
            LI       +  + + LL +M+
Sbjct: 447 ILIESLCSERRLKEALMLLKEME 469


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 196/365 (53%), Gaps = 3/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYN II+G+C+EG VD A+    ++      PD V+Y +++ GLC A  W + +
Sbjct: 211 CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVE 270

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EMM++   P+ VTF++++   C+ G ++ A ++L+ M       N    + +++  
Sbjct: 271 ELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTI 330

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A +   +M S GC  D +SY  ++ G C+ +  E+A  L +EMV K   P  
Sbjct: 331 CKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE 390

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NT    L +   +E A  L E+M       +  TYN  ++G C  G +  A+ELF +
Sbjct: 391 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYS 450

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ +   Y  L+ GLC + RL+ A EL   + ++    +VVT+N+++   C  G 
Sbjct: 451 M---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGL 507

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           MD+A +L   M E+   PN+I + TL+ G  +     + +ELLH +    V PD    S 
Sbjct: 508 MDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSS 567

Query: 372 VVDLL 376
           ++ +L
Sbjct: 568 IIGVL 572



 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 191/363 (52%), Gaps = 3/363 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ VTY  +++ +CK     +A  +  +M+ +   P++VTYN +I+G+C     ++A+
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                +   G QP  V++  ++  LC   + ++   L   M++++  PN  T+  L+  F
Sbjct: 236 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + RA ++   M   GC  +    NI+IN  CK   V++A      M S G  P  
Sbjct: 296 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 355

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++Y T+  GL    + E A +L +EM R +   +  T+NTFI  LC+ G I +A  L   
Sbjct: 356 ISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 415

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    CE++I  YN L++G C  GR++ ALELF S+P +    + +TY  ++ GLCN  +
Sbjct: 416 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAER 472

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D A +L  +M +   APNV+ F  L+  F +     + IEL+ +M E    P+    + 
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 532

Query: 372 VVD 374
           ++D
Sbjct: 533 LLD 535



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 178/343 (51%), Gaps = 3/343 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
            YNT++ G C+ G +D A+ L   M    + PD  TY  +I GLC      EA  L  +M
Sbjct: 115 AYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 171

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           + +G QPSVVT+ V+++ +CK+    +A  +LD M  +   PN  TY+ +++G C  G++
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 231

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A E    + S G + D VSY  ++ G C  K  E+   L+ EM+ K   P  VT++ L
Sbjct: 232 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 291

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
                    VE A+++ E+M     AA+T+  N  I+ +CK G + +A +    +G   C
Sbjct: 292 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC 351

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D  +Y  ++ GLC++ R E A EL + + R+    + VT+N  I  LC  G +++A  
Sbjct: 352 SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM 411

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           L   M E+    N++ +  L++GF    +    +EL + M  K
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK 454



 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 183/352 (51%), Gaps = 3/352 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  NT   N +I+ +CK+G VD A      M     +PD ++Y +++ GLC A  W +AK
Sbjct: 316 CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAK 375

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+ +   P+ VTFN  +  LC+ G +++A+ L++ M +     N  TY+ L++GF
Sbjct: 376 ELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 435

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C+ G+++ A ELF SM    CK + ++Y  L+ G C  + ++ A  L  EM+ K   P V
Sbjct: 436 CVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNV 492

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+N L     +   ++ A++L E+M       +  TYNT +DG+ K+    EA+EL   
Sbjct: 493 VTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHG 552

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L       DI  Y+ +I  L +  R+E A+++F  +    +    V YN ++  LC    
Sbjct: 553 LVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCN 612

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            D A D F  M  N   PN + ++TLI G    +   +  +LL ++  + V+
Sbjct: 613 TDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 175/354 (49%), Gaps = 3/354 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VT++ ++   C+ G V++A  +  QM G     +    N +I+ +C     ++A 
Sbjct: 281 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAF 340

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +    M   G  P  +++  ++  LC+  + ++A  LL  MV+++  PN  T++T +   
Sbjct: 341 QFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICIL 400

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I +A  L   M   GC+ + V+YN L+NG+C    V+ AL L+  M     KP  
Sbjct: 401 CQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNT 457

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY TL  GL    +++ A +L  EM + D A +  T+N  +   C+ G + EA+EL   
Sbjct: 458 ITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQ 517

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  ++  YN L+DG+ K    E ALEL   L    +  D+VTY+ +I  L  + +
Sbjct: 518 MMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDR 577

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +++A  +F  +++  + P  +I+  ++    +       I+    M     MP+
Sbjct: 578 VEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPN 631



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 170/325 (52%), Gaps = 5/325 (1%)

Query: 3   NGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC 62
           N  G  G  C P+T++Y T++ GLC+    + AK L  +M  +N  P+ VT+N+ I  LC
Sbjct: 344 NNMGSYG--CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILC 401

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
                 +A  L  +M + G + ++VT+N +++  C  G++D A   L+L      +PN  
Sbjct: 402 QKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA---LELFYSMPCKPNTI 458

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TY+TL+ G C   +++ A EL   M    C  + V++N+L++ +C+   ++EA+ L  +M
Sbjct: 459 TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 518

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
           +  G  P ++TYNTL  G+ +    E AL+L   +  + V+ D  TY++ I  L +   +
Sbjct: 519 MEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRV 578

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            EA+++F  +  L        YN ++  LCK    + A++ F  +     + + +TY  +
Sbjct: 579 EEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITL 638

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAV 327
           I GL N+  + +  DL  ++    V
Sbjct: 639 IEGLANEDFLKETRDLLRELCSRGV 663



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 156/335 (46%), Gaps = 10/335 (2%)

Query: 31  FVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFN 90
            VD+A +     +GE   PDV     LI  LC     ++A R+       G    V  +N
Sbjct: 65  LVDRATS-----RGEA--PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 117

Query: 91  VIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
            ++   C+ G++D A RL+  M    V P+A+TY+ ++ G C  G++  A  L   M   
Sbjct: 118 TLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 174

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           GC+   V+Y +L+   CK+    +A+ +  EM +KG  P +VTYN +  G+    +V+ A
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
            +    +       DT +Y T + GLC      +  ELF  +    C  +   ++ L+  
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
            C+ G +E A+++   +      A+    NI+I+ +C  G++D A     +M     +P+
Sbjct: 295 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            I + T++ G  R  +     ELL +M  K   P+
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPN 389



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 134/287 (46%), Gaps = 3/287 (1%)

Query: 90  NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
           N  +  L     + EA+RL+D    R   P+ +  + L+   C  G+ + A  +  + E 
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
            G   D  +YN L+ GYC+  +++ A  L   + S  + P   TY  +  GL +  +V  
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           AL L ++M          TY   ++ +CK+    +A+E+   +    C  +I  YN +I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           G+C+ GR++ A E    L       D V+Y  ++ GLC   + +   +LF +M E    P
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           N + F  L+  F R     + I++L +M       + ++ ++V++ +
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTI 330


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 120/353 (33%), Positives = 194/353 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTYNTI+ G C  G V+ A A+   MK + I PD  TY SLI G+C      EA +
Sbjct: 253 KPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASK 312

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM+ +G++PS V +N ++D  C  G +D AS   D M+++ + P   TY++L+    
Sbjct: 313 IFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALF 372

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  + + AE +   ++  G   D ++YNILINGYC+    ++A  L+ EM++ GIKPT  
Sbjct: 373 MEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKK 432

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY +L   L + ++++ A  LF+++  + V  D   +N  IDG C N  +  A EL + +
Sbjct: 433 TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDM 492

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +K   D   +N ++ G C+ G++E A ELF  + RR +  D +++N +I G    G +
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             A  +  +M +    P V+ +  L+ G  +  +     ELL +M  K + PD
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPD 605



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 186/359 (51%), Gaps = 2/359 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E GV+  P   T N+++    K    + A  L+ +M    I   V T+N +I+ LC    
Sbjct: 179 EKGVL--PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGK 236

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +AK     M   GV+P++VT+N I+   C +G+++ A  +L  M ++ + P++FTY +
Sbjct: 237 LKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ G C  G++  A ++F  M   G +   V YN LI+G+C    ++ A +   EM+ KG
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I PT+ TYN+L   LF   + + A  + +E+Q   ++ D  TYN  I+G C+     +A 
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAF 416

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            L   +     +   + Y  L+  L K  R++ A +LF+ +    ++ DV+ +N +I G 
Sbjct: 417 LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGH 476

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           C++  +  A +L  DM+   V P+ + F T++ G  R  K  +  EL  +MK + + PD
Sbjct: 477 CSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPD 535



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 163/323 (50%)

Query: 52  VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL 111
           + ++ LI   C  N  +EA   F+ M ++GV P++ T N ++    K  + + A  L   
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           M +  ++ + +T++ +++  C  GK+ +A++  G ME+ G K + V+YN +++GYC +  
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           VE A ++   M  + I+P   TY +L  G+ +  ++E A K+FEEM +  +      YNT
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            IDG C  G +  A      +        +  YN LI  L    R + A  + + +  + 
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           +  D +TYNI+I+G C      KA  L  +M  + + P    + +L+H   + N+  +  
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451

Query: 352 ELLHKMKEKKVMPDASIVSMVVD 374
           +L  K+  + V+PD  + + ++D
Sbjct: 452 DLFKKITSEGVLPDVIMFNALID 474



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 141/292 (48%)

Query: 85  SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELF 144
           S + F+ ++   C   + DEA      M ++ V P   T ++L+  F    +   A  L+
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 145 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 204
             M  +  K    ++NI+IN  CK  ++++A      M + G+KP +VTYNT+  G    
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 205 HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
            +VE A  +   M+R  +  D+ TY + I G+CK G + EA ++F  +           Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
           N LIDG C  G L++A      + ++ +   + TYN +IH L  + + D+A  +  +++E
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             ++P+ I +  LI+G+ R     K   L  +M    + P     + ++ +L
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVL 441



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 109/211 (51%), Gaps = 5/211 (2%)

Query: 135 GKINRAEELF----GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           G  N   E+F     S + +G K   + ++ LI   C     +EA   +  M  KG+ PT
Sbjct: 127 GTTNSIREIFEFLAASRDRLGFK-SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPT 185

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           + T N+L     ++++ E A  L+ EM R  + +   T+N  I+ LCK G + +A +   
Sbjct: 186 IETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVG 245

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +     + +I  YN ++ G C SGR+E A  +  ++ R+ +  D  TY  +I G+C  G
Sbjct: 246 HMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQG 305

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           ++++A  +F +M +  + P+ +I+ TLI GF
Sbjct: 306 RLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336



 Score = 45.1 bits (105), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 32/58 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           P  +TYN ++ GLCK    D A+ L  +M  + + PD  TY +LI G+   N  +E K
Sbjct: 569 PTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENK 626


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 135/367 (36%), Positives = 197/367 (53%), Gaps = 3/367 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNTVTYNT+I  LCKE  V++A  L   +  + I PDV T+NSLI GLC   +   A 
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM  +G +P   T+N+++D LC  GK+DEA  +L  M       +  TY+TL+DGF
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   KI  AEE+F  ME  G   + V+YN LI+G CK++ VE+A  L  +M+ +G KP  
Sbjct: 481 CKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDK 540

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN+L         ++ A  + + M  +    D  TY T I GLCK G +  A +L R+
Sbjct: 541 FTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS-LPRRVLVADVVTYNIMIHGLCN-D 309
           + +    L   AYN +I GL +  +   A+ LFR  L +     D V+Y I+  GLCN  
Sbjct: 601 IQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGG 660

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G + +A D  +++ E    P       L  G + ++    +++L++ + +K    +   V
Sbjct: 661 GPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEE-V 719

Query: 370 SMVVDLL 376
           SMV  LL
Sbjct: 720 SMVKGLL 726



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/400 (32%), Positives = 215/400 (53%), Gaps = 37/400 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+NT+++GLCK G V  A  +   M  E  +PDV TYNS+I GLC   +  EA   
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEF 352

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+ +   P+ VT+N ++  LCK  +++EA+ L  ++  + + P+  T+++L+ G CL
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           T     A ELF  M S GC+ D+ +YN+LI+  C   +++EAL++ ++M   G   +V+T
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN-------------- 239
           YNTL  G  + +++  A ++F+EM+   V+ ++ TYNT IDGLCK+              
Sbjct: 473 YNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMI 532

Query: 240 ---------------------GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                                G I +A ++ + +    CE DI  Y  LI GLCK+GR+E
Sbjct: 533 MEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM-EENAVAPNVIIFVTL 337
           +A +L RS+  + +      YN +I GL    +  +A +LF +M E+N  AP+ + +  +
Sbjct: 593 VASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIV 652

Query: 338 IHGFVRINKP-SKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             G      P  + ++ L ++ EK  +P+ S + M+ + L
Sbjct: 653 FRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692



 Score =  213 bits (543), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 121/352 (34%), Positives = 180/352 (51%), Gaps = 1/352 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN-INPDVVTYNSLIHGLCHANDWNEA 70
           C  + V+ N I+ G CKEG V+ A     +M  ++   PD  T+N+L++GLC A     A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             +   M+ +G  P V T+N ++  LCK G++ EA   LD M+ RD  PN  TY+TL+  
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLIST 374

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C   ++  A EL   + S G   D  ++N LI G C  +    A+ L+ EM SKG +P 
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             TYN L   L    +++ AL + ++M+    A    TYNT IDG CK   I EA E+F 
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFD 494

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            + +     +   YN LIDGLCKS R+E A +L   +       D  TYN ++   C  G
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGG 554

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
            + KA D+   M  N   P+++ + TLI G  +  +     +LL  ++ K +
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 179/353 (50%), Gaps = 1/353 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+ TI+ G  +EG +D A  +  QM     +   V+ N ++HG C      +A   
Sbjct: 222 PDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNF 281

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             EM +Q G  P   TFN +++ LCK G +  A  ++D+M+Q    P+ +TY++++ G C
Sbjct: 282 IQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC 341

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A E    M +  C  + V+YN LI+  CK  +VEEA  L R + SKGI P V 
Sbjct: 342 KLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 401

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N+L  GL        A++LFEEM+      D  TYN  ID LC  G + EA+ + + +
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +  C   +  YN LIDG CK+ ++  A E+F  +    +  + VTYN +I GLC   ++
Sbjct: 462 ELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + A  L   M      P+   + +L+  F R     K  +++  M      PD
Sbjct: 522 EDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 191/368 (51%), Gaps = 7/368 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+T  YN +++ L     +   +    +M    I PDV T+N LI  LC A+    A  
Sbjct: 151 KPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAIL 210

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M   G+ P   TF  IM    + G +D A R+ + MV+     +  + + ++ GFC
Sbjct: 211 MLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270

Query: 133 LTGKINRAEELFGSMESM-GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
             G++  A      M +  G   D  ++N L+NG CK   V+ A+ +   M+ +G  P V
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN++  GL ++ +V+ A++  ++M   D + +T TYNT I  LCK   + EA EL R 
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390

Query: 252 L---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           L   GIL    D+  +N LI GLC +    +A+ELF  +  +    D  TYN++I  LC+
Sbjct: 391 LTSKGILP---DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G++D+A ++   ME +  A +VI + TLI GF + NK  +  E+  +M+   V  ++  
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVT 507

Query: 369 VSMVVDLL 376
            + ++D L
Sbjct: 508 YNTLIDGL 515



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/405 (23%), Positives = 185/405 (45%), Gaps = 42/405 (10%)

Query: 14  PNTVTYNT----IIDGLCKEGFVDKAKALF-LQMKGENINPDVVTYNSLIHGLCHANDWN 68
           PN+   ++    ++D L  +     A  LF L  K  N +P+   Y  ++  L  +  ++
Sbjct: 41  PNSAALSSSDVKLLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFD 100

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA--------------------SRL 108
           + +++  +M + G +     F ++++   +    DE                     +R+
Sbjct: 101 DMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRM 160

Query: 109 LDLMVQRD----------------VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           L+L+V  +                ++P+  T++ L+   C   ++  A  +   M S G 
Sbjct: 161 LNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGL 220

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
             D+ ++  ++ GY +  +++ AL +  +MV  G   + V+ N +  G  +  +VE AL 
Sbjct: 221 VPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALN 280

Query: 213 LFEEMQ-RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
             +EM  +D    D  T+NT ++GLCK G++  A+E+   +     + D+  YN +I GL
Sbjct: 281 FIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGL 340

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           CK G ++ A+E    +  R    + VTYN +I  LC + Q+++A +L   +    + P+V
Sbjct: 341 CKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDV 400

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             F +LI G          +EL  +M+ K   PD    +M++D L
Sbjct: 401 CTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 445


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 131/405 (32%), Positives = 215/405 (53%), Gaps = 37/405 (9%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C+PN+ TY  ++DGLCKEG V++A  L  +MK + +  DVV Y++LI G C     +
Sbjct: 38  GSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLD 97

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
             K LF EM+++G+ P+VV ++ +++  CK G   EA+ +L  M +R ++P+ +TY+ ++
Sbjct: 98  RGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMI 157

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C  G+  +A +LF  M   G +   V+YN+LING CK   + +A  ++  M+ KG +
Sbjct: 158 GGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKR 217

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD--VAADTSTYNTFIDGLCKNGYIVEAV 246
             VV+YNTL +GL    +++ A+KLF  +  D   V  D  T+NT I GLCK G + +AV
Sbjct: 218 LEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAV 277

Query: 247 ELFRTL----------------------GILKCELDI-------------QAYNCLIDGL 271
           E++ T+                      GI+   +++               Y+ +IDG 
Sbjct: 278 EIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGF 337

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           CK   L  A  LF  +    L   +  YN ++  LC +  +++A  LF +M+E+   P+ 
Sbjct: 338 CKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDT 397

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           I F  +I G ++        ELL+ M++  + PDA   S  ++ L
Sbjct: 398 ISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRL 442



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/335 (35%), Positives = 191/335 (57%), Gaps = 2/335 (0%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           MK  NI PD+V+YN++I+GLC      +A  L  EM     +P+  T+ ++MD LCK G+
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           ++EA RLL  M ++ +  +   YSTL+ GFC  G ++R + LF  M   G   + V Y+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LING+CK     EA ++   M  +GI+P V TY  +  GL +  +   AL LF+ M    
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
               T TYN  I+GLCK G I +A ++F T+      L++ +YN LI GLC +G+L+ A+
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 282 ELFRSLPR--RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           +LF SL      +  DV+T+N +I GLC +G++DKA +++  M E     N+     LI 
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +++     K +EL  ++ +  ++P ++  S+++D
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMID 335



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 201/366 (54%), Gaps = 2/366 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TY  +I GLCK+G   KA  LF  M  +   P  VTYN LI+GLC      +A +
Sbjct: 147 QPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFK 206

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD--VRPNAFTYSTLMDG 130
           +F  M+++G +  VV++N ++  LC NGK+DEA +L   +++    V P+  T++T++ G
Sbjct: 207 IFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQG 266

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  G++++A E++ +M   G   +  + +ILI  Y K+  +++A+ L++ +   G+ P+
Sbjct: 267 LCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPS 326

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             TY+ +  G  ++H +  A  LF  M+   ++     YNT +  LCK   + +A  LF+
Sbjct: 327 STTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQ 386

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    CE D  ++N +IDG  K+G +  A EL   + +  L  D  TY+  I+ L   G
Sbjct: 387 EMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLG 446

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           QM++A   F  M  + + P+  ++ +LI GF   ++  +VI LL +M +  V+ D  I +
Sbjct: 447 QMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITN 506

Query: 371 MVVDLL 376
            ++  L
Sbjct: 507 SILTFL 512



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 187/344 (54%), Gaps = 2/344 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+TVTYN +I+GLCKEG +  A  +F  M  +    +VV+YN+LI GLC+    +EA +
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMK 241

Query: 73  LFFEMMDQG--VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           LF  +++ G  V+P V+TFN ++  LCK G++D+A  + D M++R    N FT   L+  
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGE 301

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +  +G I++A EL+  +  +G      +Y+++I+G+CK   +  A  L+  M   G+ PT
Sbjct: 302 YIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPT 361

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           +  YNTL   L +   +E A +LF+EM+  +   DT ++N  IDG  K G I  A EL  
Sbjct: 362 LFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLN 421

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +  +    D   Y+  I+ L K G++E A   F S+    +  D   Y+ +I G   + 
Sbjct: 422 DMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLND 481

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           ++++  +L   M +  V  ++ I  +++       +   V+ELL
Sbjct: 482 EIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELL 525



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 136/278 (48%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E G   +P+ +T+NT+I GLCKEG +DKA  ++  M       ++ T + LI     +  
Sbjct: 248 EDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGI 307

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            ++A  L+  +   G+ PS  T++V++D  CK   ++ A  L   M    + P  F Y+T
Sbjct: 308 IDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNT 367

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           LM   C    + +A  LF  M+   C+ D +S+NI+I+G  K  ++  A  L  +M   G
Sbjct: 368 LMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMG 427

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P   TY++    L ++ Q+E A   F+ M    +  D   Y++ I G   N  I E +
Sbjct: 428 LTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVI 487

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
            L R +  +   LD++  N ++  LC S      +EL 
Sbjct: 488 NLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELL 525



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 90/186 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    YNT++  LCKE  +++A+ LF +MK  N  PD +++N +I G   A D + AK L
Sbjct: 360 PTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKEL 419

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   G+ P   T++  ++ L K G+M+EA    D M+   + P+   Y +L+ GF L
Sbjct: 420 LNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGL 479

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +I     L   M  MG   D    N ++   C + E    + L     S+    T ++
Sbjct: 480 NDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFSSESSGGTSIS 539

Query: 194 YNTLFL 199
            + L +
Sbjct: 540 CDKLLM 545


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 196/365 (53%), Gaps = 3/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYN II+G+C+EG VD A+    ++      PD V+Y +++ GLC A  W + +
Sbjct: 242 CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVE 301

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EMM++   P+ VTF++++   C+ G ++ A ++L+ M       N    + +++  
Sbjct: 302 ELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTI 361

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A +   +M S GC  D +SY  ++ G C+ +  E+A  L +EMV K   P  
Sbjct: 362 CKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE 421

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NT    L +   +E A  L E+M       +  TYN  ++G C  G +  A+ELF +
Sbjct: 422 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYS 481

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ +   Y  L+ GLC + RL+ A EL   + ++    +VVT+N+++   C  G 
Sbjct: 482 M---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGL 538

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           MD+A +L   M E+   PN+I + TL+ G  +     + +ELLH +    V PD    S 
Sbjct: 539 MDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSS 598

Query: 372 VVDLL 376
           ++ +L
Sbjct: 599 IIGVL 603



 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 191/363 (52%), Gaps = 3/363 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ VTY  +++ +CK     +A  +  +M+ +   P++VTYN +I+G+C     ++A+
Sbjct: 207 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 266

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                +   G QP  V++  ++  LC   + ++   L   M++++  PN  T+  L+  F
Sbjct: 267 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 326

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + RA ++   M   GC  +    NI+IN  CK   V++A      M S G  P  
Sbjct: 327 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 386

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++Y T+  GL    + E A +L +EM R +   +  T+NTFI  LC+ G I +A  L   
Sbjct: 387 ISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 446

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    CE++I  YN L++G C  GR++ ALELF S+P +    + +TY  ++ GLCN  +
Sbjct: 447 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAER 503

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D A +L  +M +   APNV+ F  L+  F +     + IEL+ +M E    P+    + 
Sbjct: 504 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 563

Query: 372 VVD 374
           ++D
Sbjct: 564 LLD 566



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 178/342 (52%), Gaps = 3/342 (0%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           YNT++ G C+ G +D A+ L   M    + PD  TY  +I GLC      EA  L  +M+
Sbjct: 147 YNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDML 203

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            +G QPSVVT+ V+++ +CK+    +A  +LD M  +   PN  TY+ +++G C  G+++
Sbjct: 204 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 263

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A E    + S G + D VSY  ++ G C  K  E+   L+ EM+ K   P  VT++ L 
Sbjct: 264 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 323

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
                   VE A+++ E+M     AA+T+  N  I+ +CK G + +A +    +G   C 
Sbjct: 324 RFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS 383

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            D  +Y  ++ GLC++ R E A EL + + R+    + VT+N  I  LC  G +++A  L
Sbjct: 384 PDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATML 443

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
              M E+    N++ +  L++GF    +    +EL + M  K
Sbjct: 444 IEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK 485



 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 184/355 (51%), Gaps = 3/355 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C  NT   N +I+ +CK+G VD A      M     +PD ++Y +++ GLC A  W 
Sbjct: 344 GHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWE 403

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +AK L  EM+ +   P+ VTFN  +  LC+ G +++A+ L++ M +     N  TY+ L+
Sbjct: 404 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALV 463

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +GFC+ G+++ A ELF SM    CK + ++Y  L+ G C  + ++ A  L  EM+ K   
Sbjct: 464 NGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCA 520

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVT+N L     +   ++ A++L E+M       +  TYNT +DG+ K+    EA+EL
Sbjct: 521 PNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALEL 580

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              L       DI  Y+ +I  L +  R+E A+++F  +    +    V YN ++  LC 
Sbjct: 581 LHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCK 640

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
               D A D F  M  N   PN + ++TLI G    +   +  +LL ++  + V+
Sbjct: 641 RCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 695



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 175/354 (49%), Gaps = 3/354 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VT++ ++   C+ G V++A  +  QM G     +    N +I+ +C     ++A 
Sbjct: 312 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAF 371

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +    M   G  P  +++  ++  LC+  + ++A  LL  MV+++  PN  T++T +   
Sbjct: 372 QFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICIL 431

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I +A  L   M   GC+ + V+YN L+NG+C    V+ AL L+  M     KP  
Sbjct: 432 CQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNT 488

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY TL  GL    +++ A +L  EM + D A +  T+N  +   C+ G + EA+EL   
Sbjct: 489 ITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQ 548

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  ++  YN L+DG+ K    E ALEL   L    +  D+VTY+ +I  L  + +
Sbjct: 549 MMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDR 608

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +++A  +F  +++  + P  +I+  ++    +       I+    M     MP+
Sbjct: 609 VEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPN 662



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 170/325 (52%), Gaps = 5/325 (1%)

Query: 3   NGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC 62
           N  G  G  C P+T++Y T++ GLC+    + AK L  +M  +N  P+ VT+N+ I  LC
Sbjct: 375 NNMGSYG--CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILC 432

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
                 +A  L  +M + G + ++VT+N +++  C  G++D A   L+L      +PN  
Sbjct: 433 QKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA---LELFYSMPCKPNTI 489

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TY+TL+ G C   +++ A EL   M    C  + V++N+L++ +C+   ++EA+ L  +M
Sbjct: 490 TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 549

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
           +  G  P ++TYNTL  G+ +    E AL+L   +  + V+ D  TY++ I  L +   +
Sbjct: 550 MEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRV 609

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            EA+++F  +  L        YN ++  LCK    + A++ F  +     + + +TY  +
Sbjct: 610 EEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITL 669

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAV 327
           I GL N+  + +  DL  ++    V
Sbjct: 670 IEGLANEDFLKETRDLLRELCSRGV 694



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 156/335 (46%), Gaps = 10/335 (2%)

Query: 31  FVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFN 90
            VD+A +     +GE   PDV     LI  LC     ++A R+       G    V  +N
Sbjct: 96  LVDRATS-----RGEA--PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 148

Query: 91  VIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
            ++   C+ G++D A RL+  M    V P+A+TY+ ++ G C  G++  A  L   M   
Sbjct: 149 TLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 205

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           GC+   V+Y +L+   CK+    +A+ +  EM +KG  P +VTYN +  G+    +V+ A
Sbjct: 206 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 265

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
            +    +       DT +Y T + GLC      +  ELF  +    C  +   ++ L+  
Sbjct: 266 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 325

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
            C+ G +E A+++   +      A+    NI+I+ +C  G++D A     +M     +P+
Sbjct: 326 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 385

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            I + T++ G  R  +     ELL +M  K   P+
Sbjct: 386 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPN 420



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 3/273 (1%)

Query: 104 EASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILI 163
            A+RL+D    R   P+ +  + L+   C  G+ + A  +  + E  G   D  +YN L+
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 164 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVA 223
            GYC+  +++ A  L   + S  + P   TY  +  GL +  +V  AL L ++M      
Sbjct: 152 AGYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL 283
               TY   ++ +CK+    +A+E+   +    C  +I  YN +I+G+C+ GR++ A E 
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268

Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
              L       D V+Y  ++ GLC   + +   +LF +M E    PN + F  L+  F R
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 328

Query: 344 INKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                + I++L +M       + ++ ++V++ +
Sbjct: 329 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTI 361


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 120/366 (32%), Positives = 201/366 (54%), Gaps = 1/366 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT +T+IDGL K G +  A  +F  M+   + P+ V Y++LIHGLC A   + A 
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  +M      P  +T+NV++D LCK+G ++ A    D M++   +P+ +TY+ L+ GF
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 132 CLTGKINRAEELFGSMESM-GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           C  G  + A        ++ GC  D  +Y  +++   KNK++EEA++L  ++ + G  PT
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           + TYN L  GL ++ ++E A+ L  ++  +    D  TY + IDGL K     EA +LF+
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 361

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            + +    LD   Y  LI  L ++G++  A  +++++     V DVVT + MI GL   G
Sbjct: 362 EMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 421

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++  A  +F  ME   +APN +++  LIHG  +  K    +E+L +MK+    PD    +
Sbjct: 422 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 481

Query: 371 MVVDLL 376
           +++D L
Sbjct: 482 ILIDGL 487



 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 128/385 (33%), Positives = 187/385 (48%), Gaps = 36/385 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN------ 65
           C P+T+TYN +IDGLCK G V+ A+A F +M      PDV TYN LI G C A       
Sbjct: 192 CTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAS 251

Query: 66  -----------------------DW-------NEAKRLFFEMMDQGVQPSVVTFNVIMDE 95
                                  DW        EA  L  ++   G  P++ T+N +++ 
Sbjct: 252 HSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNG 311

Query: 96  LCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHD 155
           LCK G+++EA  LL  +V     P+  TY++L+DG     +   A +LF  M   G   D
Sbjct: 312 LCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALD 371

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
            V Y  LI    +  ++ +A S+Y+ M S G  P VVT +T+  GL +  ++  A+++F+
Sbjct: 372 TVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 431

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
            M+   +A +   Y+  I GLCK   +  A+E+   +    C  D   YN LIDGLCKSG
Sbjct: 432 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 491

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
            +E A   F  +       DV TYNI+I G C  G  D A  +F DM  +  + NV+ + 
Sbjct: 492 DVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYG 551

Query: 336 TLIHGFVRINKPSKVIELLHKMKEK 360
            LI G  +  + +K       MKE+
Sbjct: 552 ALISGLCKRRQLTKASLYFQHMKER 576



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/401 (32%), Positives = 190/401 (47%), Gaps = 36/401 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P   TYN +++GLCK G +++A  L  ++      PDVVTY SLI GL       EA 
Sbjct: 17  CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 76

Query: 72  RLFFEMMDQGVQ-----------------------------------PSVVTFNVIMDEL 96
           +LF EM  +G+                                    P VVT + ++D L
Sbjct: 77  KLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 136

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
            K G++  A R+   M  R + PN   YS L+ G C   K++ A E+   M+   C  D 
Sbjct: 137 SKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 196

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL-KLFE 215
           ++YN+LI+G CK+ +VE A + + EM+  G KP V TYN L  G  +    + A   L +
Sbjct: 197 ITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQ 256

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
           E   +    D  TY   +D L KN  I EAV L   +    C   I  YN L++GLCK G
Sbjct: 257 ETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMG 316

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           RLE A++L R +       DVVTY  +I GL  + +  +A+ LF +M    +A + + + 
Sbjct: 317 RLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYT 376

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            LI   ++  K  +   +   M     +PD   +S ++D L
Sbjct: 377 ALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 417



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 180/349 (51%), Gaps = 7/349 (2%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +++A AL  ++      P + TYN+L++GLC      EA  L  +++D G  P VVT+  
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           ++D L K  +  EA +L   M  R +  +   Y+ L+     TGKI +A  ++ +M S G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
           C  D V+ + +I+G  K   +  A+ +++ M ++G+ P  V Y+ L  GL +  +++ AL
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           ++  +M++     DT TYN  IDGLCK+G +  A   F  +    C+ D+  YN LI G 
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 272 CKSGRLEIALELFRSLPRRVLV----ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           CK+G  + A     SL +   +     D+ TY  ++  L  + ++++A  L   +  N  
Sbjct: 242 CKAGNTDAA---SHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGC 298

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            P +  +  L++G  ++ +  + I+LL K+ +    PD    + ++D L
Sbjct: 299 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 347



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 124/243 (51%)

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K++EA  L++ +      P   TY+ L++G C  G++  A +L   +   GC  D V+Y 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            LI+G  K K   EA  L++EM  +G+    V Y  L   L +  ++  A  +++ M   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
               D  T +T IDGL K G I  AV +F+++       +   Y+ LI GLCK+ +++ A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           LE+   + +     D +TYN++I GLC  G ++ A   F +M E    P+V  +  LI G
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 341 FVR 343
           F +
Sbjct: 241 FCK 243



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 118/230 (51%)

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           KI  A  L   + + GC     +YN L+NG CK   +EEA+ L R++V  G  P VVTY 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           +L  GL +  +   A KLF+EM    +A DT  Y   I  L + G I +A  +++T+   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
            C  D+   + +IDGL K+GR+  A+ +F+S+  R L  + V Y+ +IHGLC   +MD A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            ++   M++    P+ I +  LI G  +            +M E    PD
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPD 230



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 100/175 (57%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT +T+IDGL K G +  A  +F  M+   + P+ V Y++LIHGLC A   + A 
Sbjct: 403 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 462

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  +M      P  +T+N+++D LCK+G ++ A    D M++   +P+ +TY+ L+ GF
Sbjct: 463 EMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 522

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           C  G  + A  +F  M S  C  + V+Y  LI+G CK +++ +A   ++ M  +G
Sbjct: 523 CKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 113/206 (54%)

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
           ++EEA++L  ++ + G  PT+ TYN L  GL ++ ++E A+ L  ++  +    D  TY 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           + IDGL K     EA +LF+ + +    LD   Y  LI  L ++G++  A  +++++   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
             V DVVT + MI GL   G++  A  +F  ME   +APN +++  LIHG  +  K    
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 351 IELLHKMKEKKVMPDASIVSMVVDLL 376
           +E+L +MK+    PD    ++++D L
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGL 206


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 129/365 (35%), Positives = 203/365 (55%), Gaps = 1/365 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PN VTY T+I  LC+ G +  A     QM    + P+ V Y+SLI G C   D  +AK 
Sbjct: 479 SPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKE 538

Query: 73  LFFEMMDQGV-QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           L  EMMDQG+ +P++  F+ I+  LC  G++  A  + +L++    RP+ FT+++L+DG+
Sbjct: 539 LVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGY 598

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL GK+++A  +  +M S G + D V+Y+ LINGY K+  +++ L L+REM+ K +KPT 
Sbjct: 599 CLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTT 658

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+ +  GLF   +   A K+F EM     A   STY   + GLC+N    EA+ LF  
Sbjct: 659 VTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHK 718

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           LG +  + +I   N +I  L K  R E A +LF S+    LV +  TY +MI  L  +G 
Sbjct: 719 LGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGS 778

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A  +F  ME+   AP+  +   +I   ++  +  K    + K+    +  +AS  S+
Sbjct: 779 VEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSL 838

Query: 372 VVDLL 376
           ++ L 
Sbjct: 839 LISLF 843



 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/371 (33%), Positives = 201/371 (54%), Gaps = 7/371 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GVV  PN VTYN+I+  LCK   +DKA+ +  QM   +I PD VTY ++IHG      W 
Sbjct: 302 GVV--PNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWK 359

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA ++F EM  +G+ P +VTFN +MD LCK+ +  EA+ +   +  +  +P+  +YS L+
Sbjct: 360 EAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILL 419

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G+   G+      LF SM   G   D   +NILIN + K   ++EAL ++ EM  +G+ 
Sbjct: 420 HGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVS 479

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTY T+   L  + ++  A++   +M    +  +T  Y++ I G C +G +++A EL
Sbjct: 480 PNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKEL 539

Query: 249 FRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
              +   GI +   +I  ++ +I  LC  GR+  A ++F  +       D+ T+N +I G
Sbjct: 540 VSEMMDQGIPR--PNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDG 597

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            C  G+MDKA  +   M      P+V+ + TLI+G+ +  +    + L  +M  K+V P 
Sbjct: 598 YCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPT 657

Query: 366 ASIVSMVVDLL 376
               S+V+D L
Sbjct: 658 TVTYSLVLDGL 668



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 176/332 (53%), Gaps = 2/332 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNEA 70
           C P+  +YNT+I  LC      +A  + L+M KG+  +PDVV+Y  +IHGL    + ++A
Sbjct: 232 CVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKA 291

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             LF EM+ +GV P+VVT+N I+  LCK   MD+A  +L  M    ++P+  TY+ ++ G
Sbjct: 292 CNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHG 351

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G+   A ++F  M   G   D V++N L++  CK+K  +EA  ++  + +KG KP 
Sbjct: 352 YSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPD 411

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           +++Y+ L  G     +      LF  M  + + AD+  +N  I+   K G + EA+ +F 
Sbjct: 412 IISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFT 471

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +       ++  Y  +I  LC+ GRL  A+E    +    L  + V Y+ +I G C  G
Sbjct: 472 EMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHG 531

Query: 311 QMDKAHDLFLDMEENAVA-PNVIIFVTLIHGF 341
            + KA +L  +M +  +  PN+  F ++IH  
Sbjct: 532 DLIKAKELVSEMMDQGIPRPNITFFSSIIHSL 563



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 170/349 (48%), Gaps = 7/349 (2%)

Query: 35  AKALFLQMKGENINPDVV-----TYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTF 89
           A ALF ++  E   P VV     TY  L+   C A   +     F  ++  G++   +  
Sbjct: 144 AVALFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVT 203

Query: 90  NVIMDELCKNGKMDEA-SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM- 147
           N  +  LC   + DEA S LL  M +    P+AF+Y+T++   C   +   A ++   M 
Sbjct: 204 NTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMT 263

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
           +  GC  D VSY ++I+G     E+ +A +L+ EMV KG+ P VVTYN++   L +   +
Sbjct: 264 KGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAM 323

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
           + A  +  +M  + +  D  TY   I G    G   EA ++F+ +       DI  +N L
Sbjct: 324 DKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSL 383

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           +D LCK  R + A E+F S+  +    D+++Y+I++HG   +G+    ++LF  M +N +
Sbjct: 384 MDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGI 443

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +   F  LI+   +     + + +  +M+ + V P+    + V+  L
Sbjct: 444 VADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAAL 492



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 151/301 (50%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           + +PN   +++II  LC EG V  A+ +F  +      PD+ T+NSLI G C     ++A
Sbjct: 548 IPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKA 607

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             +   M+  G +P VVT++ +++   K+G++D+   L   M+ + V+P   TYS ++DG
Sbjct: 608 FGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDG 667

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               G+ + A+++F  M   G      +Y I++ G C+N   +EA++L+ ++ +  +K  
Sbjct: 668 LFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFE 727

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           +   NT+   L+++ + E A  LF  +    +  + STY   I  L K G + EA  +F 
Sbjct: 728 IAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFS 787

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
           ++    C    +  N +I  L + G +  A      +   ++  +  T +++I    + G
Sbjct: 788 SMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKG 847

Query: 311 Q 311
           +
Sbjct: 848 R 848



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 121/286 (42%), Gaps = 38/286 (13%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTY+T+I+G  K G +D    LF +M  + + P  VTY+ ++ GL  A   + AK+
Sbjct: 620 EPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKK 679

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM++ G   S+ T+ +I+  LC+N   DEA                           
Sbjct: 680 MFHEMIESGTAMSISTYTIILQGLCRNNCTDEAI-------------------------- 713

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                     LF  + +M  K +    N +I+   K K  EEA  L+  + + G+ P   
Sbjct: 714 ---------TLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNAS 764

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  + + L +   VE A  +F  M++   A  +   N  I  L + G IV+A      +
Sbjct: 765 TYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKV 824

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
                 L+    + LI      GR     E  + LP +    D ++
Sbjct: 825 DGTIISLEASTTSLLISLFASKGRYR---EQIKFLPAKYQFFDGIS 867



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 82/220 (37%), Gaps = 49/220 (22%)

Query: 206 QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE-------AVELFRTL-----G 253
             E A  LF+E+ R D        N F+  L +    V        AV LF  +     G
Sbjct: 98  STEDAHHLFDELLRQDTPVHGRALNGFLAALARARDSVACSDAPALAVALFNRICREEAG 157

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL--------------------- 292
                L +  Y  L+D  C++ R ++    F  L R  L                     
Sbjct: 158 PRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTD 217

Query: 293 ---------------VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE-NAVAPNVIIFVT 336
                          V D  +YN +I  LC   +  +A D+ L M + +  +P+V+ +  
Sbjct: 218 EALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTM 277

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +IHG     + SK   L ++M +K V+P+    + +V  L
Sbjct: 278 VIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHAL 317


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  234 bits (597), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 203/373 (54%), Gaps = 15/373 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TYN I++GLC+E  +D+AK +  +M      PDVVTYNS I GLC  +  +EA+
Sbjct: 143 CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEAR 202

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +    M    V P VV++  +++ LCK+G +D ASR+LD M  R   P+  TYS+L+DGF
Sbjct: 203 KFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGF 259

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++ RA  L  SM  +GC+ + V+YN L+    +   + +A  +  EM  +G  P V
Sbjct: 260 CKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDV 319

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI----------DGLCKNGY 241
           V+YN    GL +  +V+ A  +F+ M       + S+Y+  I          DGLCK G 
Sbjct: 320 VSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGR 379

Query: 242 IVEAVELF-RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
             EA  LF + L    CE D+  YN ++D  CK  +++ AL++ + +  +    +VVT+N
Sbjct: 380 FDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKN-CCNVVTWN 438

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           I++HGLC D ++  A  + L M +    P+ + + TL+    +  K +  +EL  +  + 
Sbjct: 439 ILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKG 498

Query: 361 KVMPDASIVSMVV 373
             +PD    S ++
Sbjct: 499 GCVPDVVTYSALI 511



 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 127/376 (33%), Positives = 195/376 (51%), Gaps = 15/376 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  VTY  I+DGLCK      A  L  +M+ +  +P++ TYN ++ GLC     +EAK
Sbjct: 108 CLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAK 167

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++  EM  +G  P VVT+N  +  LCK  ++DEA + L  M    V P+  +Y+T+++G 
Sbjct: 168 KMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGL 224

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +G ++ A  +   M + GC  D V+Y+ LI+G+CK  EVE A+ L   M+  G +P +
Sbjct: 225 CKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNM 284

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YN+L   L  +  +  A  +  EM+R     D  +YN  IDGLCK   + +A  +F  
Sbjct: 285 VAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDR 344

Query: 252 LGILKCE----------LDIQAYNCLIDGLCKSGRLEIALELF-RSLPRRVLVADVVTYN 300
           +    C           +DI  Y  L+DGLCK GR + A  LF + L  ++   DV  YN
Sbjct: 345 MVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYN 404

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +M+   C   Q+DKA  +   M E     NV+ +  L+HG    ++ S    +L  M ++
Sbjct: 405 VMLDSHCKRRQIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDE 463

Query: 361 KVMPDASIVSMVVDLL 376
             +PD      +VD +
Sbjct: 464 GFIPDFVTYGTLVDAM 479



 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 185/363 (50%), Gaps = 4/363 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  TYN ++  L +E   DKA A+F +M  ++  PD  T+  L+ GLC +N   +A++L 
Sbjct: 6   NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M + G  P    +N ++    K     +A + L  MV+    P   TY+ ++DG C  
Sbjct: 66  GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKA 125

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            +   A +L   M   GC  +  +YN+++ G C+ ++++EA  +  EM  +G  P VVTY
Sbjct: 126 ERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTY 185

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N+   GL +  +V+ A K    M    V  D  +Y T I+GLCK+G +  A  +   +  
Sbjct: 186 NSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSN 242

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C  D+  Y+ LIDG CK G +E A+ L  S+ +     ++V YN ++  L   G + K
Sbjct: 243 RGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGK 302

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM-VV 373
           A D+ ++ME     P+V+ +   I G  +  +  K   +  +M E+   P+AS  SM +V
Sbjct: 303 AEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIV 362

Query: 374 DLL 376
           D+L
Sbjct: 363 DIL 365



 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 191/374 (51%), Gaps = 14/374 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+  T+  ++ GLC+   ++KA+ L  +MK     PD   YN+LI G   A D+ +A 
Sbjct: 38  CQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAF 97

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +   EM+     P+VVT+  I+D LCK  +  +A +LLD M  +   PN +TY+ +++G 
Sbjct: 98  KFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGL 157

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++ A+++   M   G   D V+YN  I G CK   V+EA      M    + P V
Sbjct: 158 CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDV 214

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+Y T+  GL +   ++ A ++ + M       D  TY++ IDG CK G +  A+ L  +
Sbjct: 215 VSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDS 274

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  L C  ++ AYN L+  L + G +  A ++   + RR    DVV+YN  I GLC   +
Sbjct: 275 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 334

Query: 312 MDKAHDLFLDMEENAVAPN----------VIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           + KA  +F  M E    PN          ++++  L+ G  +  +  +   L  K+ ++K
Sbjct: 335 VKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEK 394

Query: 362 VM-PDASIVSMVVD 374
           +  PD    ++++D
Sbjct: 395 ICEPDVFFYNVMLD 408



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 154/285 (54%), Gaps = 3/285 (1%)

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           G + +V T+N ++ +L +  + D+AS +   M+ +  +P+AFT++ L+ G C + ++ +A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
            +L G M+ MGC  DD  YN LI+GY K K+  +A     EMV     PTVVTY  +  G
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
           L +  +   A+KL +EM+    + +  TYN  ++GLC+   + EA ++   + +     D
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           +  YN  I GLCK  R++ A +    +P   +  DVV+Y  +I+GLC  G +D A  +  
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            M      P+V+ + +LI GF +  +  + + LL  M +    P+
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPN 283



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 134/252 (53%), Gaps = 12/252 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN V YN+++  L + G + KA+ + ++M+     PDVV+YN+ I GLC A    +AK
Sbjct: 280 CRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAK 339

Query: 72  RLFFEMMDQGVQPS----------VVTFNVIMDELCKNGKMDEASRLLDLMVQRDV-RPN 120
            +F  M+++G  P+          ++ + V++D LCK G+ DEA  L   ++   +  P+
Sbjct: 340 AVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPD 399

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
            F Y+ ++D  C   +I++A ++   M    C  + V++NIL++G C +  + +A ++  
Sbjct: 400 VFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLL 458

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            MV +G  P  VTY TL   + +  +   AL+LFEE  +     D  TY+  I GL    
Sbjct: 459 TMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHEN 518

Query: 241 YIVEAVELFRTL 252
              EA  LF  L
Sbjct: 519 MAEEAYLLFTKL 530



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 111/227 (48%), Gaps = 3/227 (1%)

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
           MG +H+  +YN L+    +    ++A ++++EM+ K  +P   T+  L  GL   +Q+E 
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           A KL   M+      D + YN  I G  K     +A +    +    C   +  Y  ++D
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           GLCK+ R   A++L   +  +    ++ TYN+++ GLC + ++D+A  +  +M      P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +V+ + + I G  + ++  +  + L +M    V PD    + V++ L
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGL 224



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 99/221 (44%), Gaps = 45/221 (20%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINP----------DVVTYNSLIHGLCH 63
           P+ V+YN  IDGLCK   V KAKA+F +M      P          D++ Y  L+ GLC 
Sbjct: 317 PDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCK 376

Query: 64  ANDWNEAKRLFFEMMDQGV-QPSVVTFNVIMDELCKNGKMDEA----------------- 105
              ++EA  LF +++D+ + +P V  +NV++D  CK  ++D+A                 
Sbjct: 377 GGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVVT 436

Query: 106 -----------SRLLD------LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSME 148
                       RL D       MV     P+  TY TL+D  C  GK   A ELF    
Sbjct: 437 WNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAV 496

Query: 149 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             GC  D V+Y+ LI G       EEA  L+ ++V +   P
Sbjct: 497 KGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVP 537



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 1/152 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +C+P+   YN ++D  CK   +DKA  +  QM  +N   +VVT+N L+HGLC  +  ++A
Sbjct: 395 ICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDA 453

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           + +   M+D+G  P  VT+  ++D +CK GK   A  L +  V+    P+  TYS L+ G
Sbjct: 454 ETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITG 513

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
                    A  LF  +       DD +  +L
Sbjct: 514 LVHENMAEEAYLLFTKLVERRWVPDDKTLGLL 545



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 60/127 (47%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N VT+N ++ GLC +  +  A+ + L M  E   PD VTY +L+  +C       A  LF
Sbjct: 433 NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELF 492

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            E +  G  P VVT++ ++  L      +EA  L   +V+R   P+  T   L     L 
Sbjct: 493 EEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLKLL 552

Query: 135 GKINRAE 141
            K  +AE
Sbjct: 553 NKPRKAE 559



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 46/83 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY T++D +CK G    A  LF +       PDVVTY++LI GL H N   EA  L
Sbjct: 467 PDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLL 526

Query: 74  FFEMMDQGVQPSVVTFNVIMDEL 96
           F +++++   P   T  ++  +L
Sbjct: 527 FTKLVERRWVPDDKTLGLLHRKL 549


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  234 bits (597), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 129/357 (36%), Positives = 200/357 (56%), Gaps = 1/357 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT+NT+++GLCK G ++ A+ +F +M  E + PD V+YN+L+ G C A   +EA  
Sbjct: 222 RPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALA 281

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM  +GV P VVTF  ++  +C+ G ++ A  L+  M +R +R N FT++ L+DGFC
Sbjct: 282 VFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFC 341

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A      M     +   V YN+LINGYCK   ++EA  L  EM +KG+KP VV
Sbjct: 342 RNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVV 401

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+T+  G  +I   + A +L  +M +  V  D  TY++ I GLC+   + +A ELF  +
Sbjct: 402 TYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKM 461

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             L  + D   Y  LIDG CK G ++ AL L   + ++ ++ DVVTY+++I GL    + 
Sbjct: 462 LQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSART 521

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            +A  L   +      P+ I +  L+H   R  +   V+ LL     K +M  A  V
Sbjct: 522 KEAQRLLFKLYYEDPVPDNIKYEALMH-CCRTAEFKSVVALLKGFSMKGLMNQADKV 577



 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 196/362 (54%)

Query: 4   GNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH 63
           G+   G  C PN VTYNT++   C+ G VD A+ L   M+   + P +VT+N++++GLC 
Sbjct: 178 GDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCK 237

Query: 64  ANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
           A    +A+++F EM  +G+ P  V++N ++   CK G + EA  +   M Q+ V P+  T
Sbjct: 238 AGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVT 297

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           +++L+   C  G + RA  L G M   G + ++ ++  LI+G+C+N  +++AL   +EM 
Sbjct: 298 FTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMR 357

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
              I+P+VV YN L  G  ++ +++ A +L  EM+   +  D  TY+T + G CK G   
Sbjct: 358 ECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTD 417

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
            A EL R +       D   Y+ LI GLC+  RL  A ELF  + +  L  D  TY  +I
Sbjct: 418 SAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLI 477

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            G C +G + KA  L  +M +  V P+V+ +  LI G  +  +  +   LL K+  +  +
Sbjct: 478 DGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPV 537

Query: 364 PD 365
           PD
Sbjct: 538 PD 539



 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 194/362 (53%), Gaps = 2/362 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + YN ++  L  +  +  A+ L   M  + + P+V TYN L+  LC      EA  +
Sbjct: 118 PSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGV 176

Query: 74  FF-EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +M   G  P+VVT+N ++   C+ G++D A RL+ +M +  VRP+  T++T+++G C
Sbjct: 177 VGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLC 236

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A ++F  M   G   D VSYN L++GYCK   + EAL+++ EM  KG+ P VV
Sbjct: 237 KAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVV 296

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+ +L   +     +E A+ L  +M+   +  +  T+   IDG C+NG++ +A+   + +
Sbjct: 297 TFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEM 356

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + +  +  YN LI+G CK GR++ A EL   +  + +  DVVTY+ ++ G C  G  
Sbjct: 357 RECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDT 416

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A +L   M +  V P+ I + +LI G     +     EL  KM +  + PD    + +
Sbjct: 417 DSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTL 476

Query: 373 VD 374
           +D
Sbjct: 477 ID 478



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 198/364 (54%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQ-MKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           PN  TYN ++  LC  G  ++A  +    M+G    P+VVTYN+L+   C A + + A+R
Sbjct: 152 PNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAER 211

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M + GV+PS+VTFN +++ LCK G+M++A ++ D M +  + P+  +Y+TL+ G+C
Sbjct: 212 LVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYC 271

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A  +F  M   G   D V++  LI+  C+   +E A++L  +M  +G++    
Sbjct: 272 KAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEF 331

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+  L  G      ++ AL   +EM+   +      YN  I+G CK G + EA EL   +
Sbjct: 332 TFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEM 391

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D+  Y+ ++ G CK G  + A EL R + ++ +V D +TY+ +I GLC + ++
Sbjct: 392 EAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRL 451

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A +LF  M +  + P+   + TLI G  +     K + L  +M +K V+PD    S++
Sbjct: 452 GDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVL 511

Query: 373 VDLL 376
           +D L
Sbjct: 512 IDGL 515



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 140/279 (50%), Gaps = 25/279 (8%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GVV  P+ +TY+++I GLC+E  +  A  LF +M    + PD  TY +LI G C   +  
Sbjct: 430 GVV--PDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQ 487

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  L  EM+ +GV P VVT++V++D L K+ +  EA RLL  +   D  P+   Y  LM
Sbjct: 488 KALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALM 547

Query: 129 ---------------DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
                           GF + G +N+A++++ SM     K D   Y++LI+G+C+   + 
Sbjct: 548 HCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIM 607

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           +ALS +++++  G  P   +  +L  GLFE      A  + +E+      AD  T    I
Sbjct: 608 KALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALI 667

Query: 234 DGLCKNGYIVEAVELFRTLGIL---KCELDIQAYNCLID 269
           D   K G     V  F+  G L   K  L ++ +NC++ 
Sbjct: 668 DLNRKEG-----VGYFQAQGELCMQKPALFVEHWNCMMS 701


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  234 bits (596), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 128/364 (35%), Positives = 206/364 (56%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY T+I    + G +  A   F QM    + PD + YNSLI G C   +  +AK L
Sbjct: 435 PDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKEL 494

Query: 74  FFEMMDQGV-QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             EMM +G+ +P+ V FN I++ LCK G++ EA  + DL++    RP+  T+++L+DG+ 
Sbjct: 495 ISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYG 554

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK+ +A  +  +M S+G + D V+Y+ L++GYC+N  +++ L L+REM+SKG+KPT +
Sbjct: 555 LVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTI 614

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  +  GLF   +   A K+  EM       D ST    + GLC+N    EA+ LF+ L
Sbjct: 615 TYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKL 674

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           G +  + +I   N +ID + K  + E A ELF S+    LV +  TY +MI  L  +G +
Sbjct: 675 GAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSV 734

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A ++F  ME++  AP+  +   +I   +   + SK    L K+  K +  +AS  S++
Sbjct: 735 EEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLM 794

Query: 373 VDLL 376
           + L 
Sbjct: 795 LSLF 798



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/359 (33%), Positives = 185/359 (51%), Gaps = 7/359 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GVV  P+ VTY++ ID LCK   +DKA+ +  QM      PD VTYN +IHG      W 
Sbjct: 257 GVV--PDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWK 314

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           E   +F EM  +G+ P + T N  M  LCK+GK  EA+   D M  +  +P+  TYS L+
Sbjct: 315 ETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLL 374

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G+   G +     LF SME  G   D   YNILI+ Y K   ++EA+ ++ +M  +G+ 
Sbjct: 375 HGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVM 434

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P   TY T+      + ++  A+  F +M    +  DT  YN+ I G C +G +V+A EL
Sbjct: 435 PDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKEL 494

Query: 249 FRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
              +   GI +   +   +N +I+ LCK GR+  A ++F  +       DV+T+N +I G
Sbjct: 495 ISEMMSRGIPR--PNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDG 552

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
               G+M+KA  +   M    + P+V+ +  L+ G+ R  +    + L  +M  K V P
Sbjct: 553 YGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKP 611



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 189/374 (50%), Gaps = 11/374 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVTYNSLIHGLCHA 64
           E+GV  +P+T++Y+T++  LC++    +A  L   M  K    +P+VV+YN++IHG    
Sbjct: 183 ELGV--EPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFRE 240

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
            + ++A  LF EMM QGV P VVT++  +D LCK   MD+A  +L  M+     P+  TY
Sbjct: 241 GEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTY 300

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + ++ G+ + G+      +F  M   G   D  + N  ++  CK+ + +EA   +  M +
Sbjct: 301 NCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAA 360

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           KG KP +VTY+ L  G      V   L LF  M+ + + AD S YN  ID   K G + E
Sbjct: 361 KGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDE 420

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A+ +F  +       D   Y  +I    + GRL  A++ F  +    L  D + YN +I 
Sbjct: 421 AMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQ 480

Query: 305 GLCNDGQMDKAHDLFLDMEENAVA-PNVIIFVTLIHGFV---RINKPSKVIELLHKMKEK 360
           G C  G + KA +L  +M    +  PN + F ++I+      R+ +   + +L+  + E+
Sbjct: 481 GFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGER 540

Query: 361 KVMPDASIVSMVVD 374
              PD    + ++D
Sbjct: 541 ---PDVITFNSLID 551



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 186/366 (50%), Gaps = 3/366 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           V  P   TYN ++D  C+        ALF +     +  DV+  N L+  LCHA   ++A
Sbjct: 114 VALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDA 173

Query: 71  KRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD--VRPNAFTYSTL 127
             +    M + GV+P  ++++ ++  LC++ +   A  LL  MV++     PN  +Y+T+
Sbjct: 174 VNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTV 233

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + GF   G++++A  LF  M   G   D V+Y+  I+  CK + +++A  + R+M+S G 
Sbjct: 234 IHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGF 293

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P  VTYN +  G   + Q +    +F EM R  +  D  T N+++  LCK+G   EA E
Sbjct: 294 EPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAE 353

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            F ++     + D+  Y+ L+ G    G +   L LF S+    +VAD   YNI+I    
Sbjct: 354 FFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYG 413

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G MD+A  +F  M+E  V P+   + T+I  F R+ + +  ++  ++M    + PD  
Sbjct: 414 KRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTI 473

Query: 368 IVSMVV 373
           + + ++
Sbjct: 474 VYNSLI 479



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 4/169 (2%)

Query: 212 KLFEEMQRDDVAADT-STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           ++  E  R  VA  T  TYN  +D  C+         LF        + D+   N L+  
Sbjct: 104 RICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKC 163

Query: 271 LCKSGRLEIALE-LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM--EENAV 327
           LC + R + A+  L   +P   +  D ++Y+ ++  LC D +  +A DL   M  +    
Sbjct: 164 LCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGC 223

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +PNV+ + T+IHGF R  + SK   L H+M ++ V+PD    S  +D L
Sbjct: 224 SPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDAL 272



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 45/101 (44%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY  +I  L KEG V++A  +F  M+     P     N++I  L    + ++A   
Sbjct: 716 PNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNY 775

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
             ++  + +     T ++++    + GK  E  + L  M Q
Sbjct: 776 LSKVDGKTISLEASTASLMLSLFSRKGKYREQIKSLPAMYQ 816


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  234 bits (596), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 195/364 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTYNTII G C  G   +A+ +F  MK + + PD  TYNS I GLC      EA  
Sbjct: 248 KPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASG 307

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M++ G+ P+ VT+N ++D  C  G +D+A    D M+ + +  +  TY+  +    
Sbjct: 308 LICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALF 367

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + G++  A+ +   M   G   D V++NILINGYC+  + + A  L  EMV KGI+PT+V
Sbjct: 368 MEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLV 427

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY +L   L + ++++ A  LF ++Q++ +  D   +N  IDG C NG I  A +L + +
Sbjct: 428 TYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEM 487

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +K   D   YN L+ G C+ G++E A +L   + RR +  D ++YN +I G    G M
Sbjct: 488 DNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDM 547

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A  +  +M      P ++ +  LI G  +  +     ELL +M  K + PD S    +
Sbjct: 548 KDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSI 607

Query: 373 VDLL 376
           ++ +
Sbjct: 608 IEAM 611



 Score =  183 bits (465), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 177/352 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T N ++    K      A  L+ +M   NI   + T+N +I+ LC      +AK  
Sbjct: 179 PNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEF 238

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   GV+P+VVT+N I+   C  GK   A  +   M  + + P+ +TY++ + G C 
Sbjct: 239 IGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCK 298

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A  L   M   G   + V+YN LI+GYC   ++++A +   EM+SKGI  ++VT
Sbjct: 299 EGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVT 358

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN     LF   ++  A  + +EM+   +  D  T+N  I+G C+ G    A  L   + 
Sbjct: 359 YNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMV 418

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +  +  Y  LI  L K  R++ A  LF  + +  L+ D++ +N +I G C +G +D
Sbjct: 419 GKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNID 478

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A  L  +M+   V P+ I + TL+ G+ R  K  +  +LL +MK + + PD
Sbjct: 479 RAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPD 530



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 139/280 (49%)

Query: 85  SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELF 144
           + + F++++   C+  K +EA     L+ ++   PN  T + ++  F    +   A  L+
Sbjct: 145 TTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLY 204

Query: 145 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 204
             M  M  +    ++NI+IN  CK  ++++A      M + G+KP VVTYNT+  G    
Sbjct: 205 AEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLR 264

Query: 205 HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
            + + A  +F+ M+   +  D  TYN+FI GLCK G + EA  L   +       +   Y
Sbjct: 265 GKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTY 324

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
           N LIDG C  G L+ A      +  + ++A +VTYN+ IH L  +G+M  A ++  +M E
Sbjct: 325 NALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMRE 384

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
             + P+ +    LI+G+ R     +   LL +M  K + P
Sbjct: 385 KGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQP 424



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 109/212 (51%), Gaps = 2/212 (0%)

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +++L+  YC+ K+  EAL  +  +  KG  P + T N +     ++++ + A  L+ EM 
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
           R ++ +   T+N  I+ LCK G + +A E    +  L  + ++  YN +I G C  G+ +
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQ 268

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A  +F+++  + L  D  TYN  I GLC +G++++A  L   M E  + PN + +  LI
Sbjct: 269 RARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALI 328

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            G+       K      +M  K +M  AS+V+
Sbjct: 329 DGYCNKGDLDKAYAYRDEMISKGIM--ASLVT 358


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  234 bits (596), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 132/401 (32%), Positives = 208/401 (51%), Gaps = 36/401 (8%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +C P+++TY+T+I+G CK     +A  L  +M+   I P    YN++I GLC  N   ++
Sbjct: 28  LCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCD-NGRVDS 86

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             + +  M +   PSV+T+ +++D LCK+ ++ +AS +L+ M++    PN  TY+TL++G
Sbjct: 87  ALVHYRDMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLING 146

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC  G ++ A  LF  M    C  D  +YNILI+GYCK +  ++   L +EMV  G +P 
Sbjct: 147 FCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPN 206

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            +TYNTL   L +  +   A  L + M R D      T+N  ID  CK G +  A ELF+
Sbjct: 207 FITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQ 266

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C  DI  YN +I G C++ R++ A +L   +       DVVTYN ++ GLC   
Sbjct: 267 LMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKAS 326

Query: 311 QMDKAHDL---------FLD--------------------------MEENAVAPNVIIFV 335
           Q+D+A+++         FLD                          ME N  AP+V+ + 
Sbjct: 327 QVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYT 386

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            LIHGF + ++  K +    +M +K  +P     S+V+D L
Sbjct: 387 ILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKL 427



 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 119/316 (37%), Positives = 181/316 (57%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYNT+I+G CK G +D+A  LF QM   + +PDV TYN LI G C      +  
Sbjct: 133 CAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGA 192

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  EM+  G +P+ +T+N +MD L K+GK  +A  L  +M++RD +P+ FT++ ++D F
Sbjct: 193 KLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMF 252

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A ELF  M   GC  D  +YNI+I+G C+   +++A  L   M   G  P V
Sbjct: 253 CKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDV 312

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN++  GL +  QV+ A +++E ++      D  T +T IDGLCK+  + +A +L R 
Sbjct: 313 VTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLRE 372

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D+ AY  LI G CK+ +L+ +L  F  +  +  V  V+TY+I+I  LC   +
Sbjct: 373 MERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSAR 432

Query: 312 MDKAHDLFLDMEENAV 327
           +     L   M E  V
Sbjct: 433 VRDGCMLLKTMLERGV 448



 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 119/351 (33%), Positives = 183/351 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY  ++D LCK   +  A  +   M      P+VVTYN+LI+G C   + +EA 
Sbjct: 98  CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAV 157

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF +M++    P V T+N+++D  CK  +  + ++LL  MV+    PN  TY+TLMD  
Sbjct: 158 VLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSL 217

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
             +GK   A  L   M    CK    ++N++I+ +CK  +++ A  L++ M  +G  P +
Sbjct: 218 VKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDI 277

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN +  G    ++++ A +L E M       D  TYN+ + GLCK   + EA E++  
Sbjct: 278 YTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEV 337

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L      LD+   + LIDGLCKS RL+ A +L R + R     DVV Y I+IHG C   Q
Sbjct: 338 LRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQ 397

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           +DK+   F +M +    P VI +  +I    +  +      LL  M E+ V
Sbjct: 398 LDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 119/250 (47%), Gaps = 1/250 (0%)

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+  F    K   A +LF +     C  D ++Y+ LING+CK ++ ++A  L  EM  +G
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I P    YNT+  GL +  +V+ AL  + +MQR   A    TY   +D LCK+  I +A 
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-HCAPSVITYTILVDALCKSARISDAS 122

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            +   +    C  ++  YN LI+G CK G ++ A+ LF  +       DV TYNI+I G 
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 182

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C   +      L  +M +    PN I + TL+   V+  K      L   M  +   P  
Sbjct: 183 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSH 242

Query: 367 SIVSMVVDLL 376
              ++++D+ 
Sbjct: 243 FTFNLMIDMF 252



 Score =  121 bits (304), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 112/217 (51%), Gaps = 1/217 (0%)

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           N L++ + + K+ +EA  L++  +     P  +TY+TL  G  +    + A +L +EM++
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
             +    + YNT I GLC NG +  A+  +R +    C   +  Y  L+D LCKS R+  
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCKSARISD 120

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A  +   +       +VVTYN +I+G C  G MD+A  LF  M EN+ +P+V  +  LI 
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           G+ +  +P    +LL +M +    P+    + ++D L
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSL 217


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  233 bits (595), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 127/366 (34%), Positives = 203/366 (55%), Gaps = 6/366 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVTYNSLIHGLCHANDWNEA 70
           KP  VTYNT+I GLCK G ++KA+ L  +M  KG    PD+VTYN+LI+    A+   EA
Sbjct: 129 KPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREA 188

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
                +M   G+ P V+T N+++  +CK+G ++EA  +LD M      P+  TY++++  
Sbjct: 189 CAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHA 248

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C+ GK+  A E+   +++M C  D V++N L++G+CK   +  AL +  EM  + I P 
Sbjct: 249 LCVAGKVVEAAEI---LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPD 305

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V+TY  L  GL  + QV+ A  L EE+ R     D   Y + +DGLCK+G I EA +L +
Sbjct: 306 VITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVK 365

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            + +  C   +  Y+ L+ G C++G +  A E+   +    +V  + TYNI++ GL  DG
Sbjct: 366 EMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDG 425

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP-DASIV 369
            + KA  L  D+      P+V+ + TLI G  + N+  +  +L  +M  +   P D ++ 
Sbjct: 426 SISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLG 485

Query: 370 SMVVDL 375
           S+V  L
Sbjct: 486 SVVFGL 491



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 193/355 (54%), Gaps = 5/355 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VT+  +I G CK G   +A      +   ++ PDV  +N LIHGL    + ++A 
Sbjct: 58  CSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAV 117

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR--PNAFTYSTLMD 129
           +LF  M    V+P +VT+N ++  LCK+G +++A  LL+ M+++  +  P+  TY+TL++
Sbjct: 118 KLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLIN 177

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            F    +I  A      M++ G   D ++ NIL++G CK+ +VEEAL +   M   G  P
Sbjct: 178 AFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVP 237

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V+TYN++   L    +V  A ++ + M     + D  T+NT +DG CK G +  A+E+ 
Sbjct: 238 DVITYNSIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVL 294

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +       D+  Y  L++GLC+ G++++A  L   + R+  + DV+ Y  ++ GLC  
Sbjct: 295 EEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKS 354

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G++++AH L  +M        V+++ +L+ G+ R     K  E+L +M    ++P
Sbjct: 355 GEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVP 409



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 188/363 (51%), Gaps = 3/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+I+   +   + +A A   +MK   INPDV+T N L+ G+C   D  EA  +
Sbjct: 167 PDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEI 226

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   G  P V+T+N I+  LC  GK+ EA+ +L  M      P+  T++TL+DGFC 
Sbjct: 227 LDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCK 283

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G + RA E+   M       D ++Y IL+NG C+  +V+ A  L  E+V +G  P V+ 
Sbjct: 284 AGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIA 343

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +L  GL +  ++E A KL +EM           Y++ + G C+ G + +A E+   + 
Sbjct: 344 YTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMV 403

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +     +  YN ++ GL K G +  A+ L   L  R  V DVVTYN +I GLC   ++ 
Sbjct: 404 SINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVR 463

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A DL  +M      PN +   +++ G  R+ +      L+ +M  K+  P+  + + ++
Sbjct: 464 EACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLI 523

Query: 374 DLL 376
           D L
Sbjct: 524 DGL 526



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/347 (33%), Positives = 182/347 (52%), Gaps = 9/347 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +  +YN ++D L K G   +   ++  +     +P++VT+  LI G C A     A  
Sbjct: 24  KHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALE 83

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
               + +  V P V  FNV++  L K+G  D+A +L + M    V+P   TY+T++ G C
Sbjct: 84  FLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLC 143

Query: 133 LTGKINRAEELFGSMESMGCKH--DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            +G + +A EL   M   G K   D V+YN LIN + +   + EA +   +M + GI P 
Sbjct: 144 KSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPD 203

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V+T N L  G+ +   VE AL++ + M+      D  TYN+ I  LC  G +VEA E+ +
Sbjct: 204 VLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILK 263

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
           T   + C  D+  +N L+DG CK+G L  ALE+   + R  ++ DV+TY I+++GLC  G
Sbjct: 264 T---MSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVG 320

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           Q+  A  L  ++      P+VI + +L+ G  +    S  IE  HK+
Sbjct: 321 QVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCK----SGEIEEAHKL 363



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 183/354 (51%), Gaps = 3/354 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TYN+II  LC  G V +A  +   M   + +PD+VT+N+L+ G C A     A  +
Sbjct: 237 PDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEV 293

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  + + P V+T+ ++++ LC+ G++  A  LL+ +V++   P+   Y++L+DG C 
Sbjct: 294 LEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCK 353

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G+I  A +L   M   GC+   V Y+ L++GYC+   V +A  +  EMVS  + P + T
Sbjct: 354 SGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFT 413

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GL +   +  A+ L  ++       D  TYNT IDGLCK   + EA +L   + 
Sbjct: 414 YNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMA 473

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  +      ++ GLC+ GR++ A  L   + R+    +VV Y  +I GLC   +MD
Sbjct: 474 SRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMD 533

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            A  +   M    VA +   +  LI       + ++ + +  +M  +  +PD S
Sbjct: 534 DACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGS 587



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 176/319 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT+NT++DG CK G + +A  +  +M  ENI PDV+TY  L++GLC       A 
Sbjct: 267 CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAF 326

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  E++ QG  P V+ +  ++D LCK+G+++EA +L+  M  R  R     YS+L+ G+
Sbjct: 327 YLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGY 386

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +++A E+   M S+       +YNI++ G  K+  + +A+SL  ++V++G  P V
Sbjct: 387 CRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDV 446

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  GL + ++V  A  L +EM       +  T  + + GLC+ G + +A  L   
Sbjct: 447 VTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVE 506

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +   ++  Y  LIDGLCKS R++ A  +  ++  + +  D   Y  +I  + + G+
Sbjct: 507 MSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGR 566

Query: 312 MDKAHDLFLDMEENAVAPN 330
           + +A  ++ +M      P+
Sbjct: 567 VAEAMAMYDEMVARGFLPD 585



 Score =  167 bits (422), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 177/342 (51%), Gaps = 7/342 (2%)

Query: 39  FLQMKGEN--INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
           F    GE      DV +YN L+  L  +       +++ +++  G  P++VTF +++   
Sbjct: 13  FFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGN 72

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           CK G+   A   L  + +  V P+ + ++ L+ G    G  ++A +LF +MES   K + 
Sbjct: 73  CKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEI 132

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIK--PTVVTYNTLFLGLFEIHQVEHALKLF 214
           V+YN +I+G CK+  +E+A  L  EM+ KG K  P +VTYNTL    +   ++  A    
Sbjct: 133 VTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFR 192

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           E+M+   +  D  T N  + G+CK+G + EA+E+   + +     D+  YN +I  LC +
Sbjct: 193 EKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVA 252

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G++  A E+ +++       D+VT+N ++ G C  G + +A ++  +M    + P+VI +
Sbjct: 253 GKVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITY 309

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             L++G  R+ +      LL ++  +  +PD    + +VD L
Sbjct: 310 TILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGL 351



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 152/319 (47%), Gaps = 45/319 (14%)

Query: 98  KNGKMDEASRLLDLMVQRD-VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           ++ + D A +  D   ++D  + +  +Y+ L+D    +G   R  +++  +   GC  + 
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNL 62

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           V++ ILI G CK  +   AL   R +    + P V  +N L  GLF+    + A+KLFE 
Sbjct: 63  VTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFEN 122

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF----RTLGILKCELDIQAYNCLID--- 269
           M+   V  +  TYNT I GLCK+G + +A EL     R  G  K   DI  YN LI+   
Sbjct: 123 MESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGG--KSAPDIVTYNTLINAFY 180

Query: 270 --------------------------------GLCKSGRLEIALELFRSLPRRVLVADVV 297
                                           G+CK G +E ALE+   +     V DV+
Sbjct: 181 RASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVI 240

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           TYN +IH LC  G++ +A ++   M   + +P+++ F TL+ GF +     + +E+L +M
Sbjct: 241 TYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEM 297

Query: 358 KEKKVMPDASIVSMVVDLL 376
             + ++PD    +++V+ L
Sbjct: 298 CRENILPDVITYTILVNGL 316



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 101/184 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TYN ++ GL K+G + KA +L   +      PDVVTYN+LI GLC AN   EA  L
Sbjct: 409 PPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDL 468

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G  P+ VT   ++  LC+ G++D+A  L+  M ++   PN   Y++L+DG C 
Sbjct: 469 ADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCK 528

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           + +++ A  +  +M   G   DD +Y  LI        V EA+++Y EMV++G  P   T
Sbjct: 529 SDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGST 588

Query: 194 YNTL 197
             TL
Sbjct: 589 SKTL 592



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 112/228 (49%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+   V Y++++ G C+ G V KA+ +  +M   N+ P + TYN ++ GL      ++A 
Sbjct: 372 CRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAV 431

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +++ +G  P VVT+N ++D LCK  ++ EA  L D M  R   PN  T  +++ G 
Sbjct: 432 SLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGL 491

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A  L   M       + V Y  LI+G CK+  +++A  +   M  +G+    
Sbjct: 492 CRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDD 551

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
             Y  L + +    +V  A+ +++EM       D ST  T  +    N
Sbjct: 552 FAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSN 599


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 195/365 (53%), Gaps = 3/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYN II+G+C+EG VD A+    ++      PD V+Y +++ GLC A  W + +
Sbjct: 211 CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVE 270

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EMM++   P+ VTF++++   C+ G ++ A ++L+ M       N    + +++  
Sbjct: 271 ELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTI 330

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A +   +M S GC  D +SY  ++ G C+ +  E+A  L +EMV K   P  
Sbjct: 331 CKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE 390

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NT    L +   +E A  L E+M       +  TYN  ++G C  G +  A+ELF +
Sbjct: 391 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYS 450

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ +   Y  L+ GLC + RL+ A EL   + ++    +VVT+N+++   C  G 
Sbjct: 451 M---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGL 507

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           MD+A +L   M E+   PN+I + TL+ G        + +ELLH +    V PD    S 
Sbjct: 508 MDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSS 567

Query: 372 VVDLL 376
           ++ +L
Sbjct: 568 IIGVL 572



 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 191/363 (52%), Gaps = 3/363 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ VTY  +++ +CK     +A  +  +M+ +   P++VTYN +I+G+C     ++A+
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                +   G QP  V++  ++  LC   + ++   L   M++++  PN  T+  L+  F
Sbjct: 236 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + RA ++   M   GC  +    NI+IN  CK   V++A      M S G  P  
Sbjct: 296 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 355

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++Y T+  GL    + E A +L +EM R +   +  T+NTFI  LC+ G I +A  L   
Sbjct: 356 ISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 415

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    CE++I  YN L++G C  GR++ ALELF S+P +    + +TY  ++ GLCN  +
Sbjct: 416 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAER 472

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D A +L  +M +   APNV+ F  L+  F +     + IEL+ +M E    P+    + 
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 532

Query: 372 VVD 374
           ++D
Sbjct: 533 LLD 535



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 178/342 (52%), Gaps = 3/342 (0%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           YNT++ G C+ G +D A+ L   M    + PD  TY  +I GLC      EA  L  +M+
Sbjct: 116 YNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDML 172

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            +G QPSVVT+ V+++ +CK+    +A  +LD M  +   PN  TY+ +++G C  G+++
Sbjct: 173 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 232

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A E    + S G + D VSY  ++ G C  K  E+   L+ EM+ K   P  VT++ L 
Sbjct: 233 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 292

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
                   VE A+++ E+M     AA+T+  N  I+ +CK G + +A +    +G   C 
Sbjct: 293 RFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS 352

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            D  +Y  ++ GLC++ R E A EL + + R+    + VT+N  I  LC  G +++A  L
Sbjct: 353 PDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATML 412

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
              M E+    N++ +  L++GF    +    +EL + M  K
Sbjct: 413 IEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK 454



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 182/352 (51%), Gaps = 3/352 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  NT   N +I+ +CK+G VD A      M     +PD ++Y +++ GLC A  W +AK
Sbjct: 316 CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAK 375

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+ +   P+ VTFN  +  LC+ G +++A+ L++ M +     N  TY+ L++GF
Sbjct: 376 ELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 435

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C+ G+++ A ELF SM    CK + ++Y  L+ G C  + ++ A  L  EM+ K   P V
Sbjct: 436 CVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNV 492

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+N L     +   ++ A++L E+M       +  TYNT +DG+  +    EA+EL   
Sbjct: 493 VTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHG 552

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L       DI  Y+ +I  L +  R+E A+++F  +    +    V YN ++  LC    
Sbjct: 553 LVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCN 612

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            D A D F  M  N   PN + ++TLI G    +   +  +LL ++  + V+
Sbjct: 613 TDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 174/354 (49%), Gaps = 3/354 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VT++ ++   C+ G V++A  +  QM G     +    N +I+ +C     ++A 
Sbjct: 281 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAF 340

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +    M   G  P  +++  ++  LC+  + ++A  LL  MV+++  PN  T++T +   
Sbjct: 341 QFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICIL 400

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I +A  L   M   GC+ + V+YN L+NG+C    V+ AL L+  M     KP  
Sbjct: 401 CQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNT 457

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY TL  GL    +++ A +L  EM + D A +  T+N  +   C+ G + EA+EL   
Sbjct: 458 ITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQ 517

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  ++  YN L+DG+      E ALEL   L    +  D+VTY+ +I  L  + +
Sbjct: 518 MMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDR 577

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +++A  +F  +++  + P  +I+  ++    +       I+    M     MP+
Sbjct: 578 VEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPN 631



 Score =  167 bits (423), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 169/325 (52%), Gaps = 5/325 (1%)

Query: 3   NGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC 62
           N  G  G  C P+T++Y T++ GLC+    + AK L  +M  +N  P+ VT+N+ I  LC
Sbjct: 344 NNMGSYG--CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILC 401

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
                 +A  L  +M + G + ++VT+N +++  C  G++D A   L+L      +PN  
Sbjct: 402 QKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA---LELFYSMPCKPNTI 458

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TY+TL+ G C   +++ A EL   M    C  + V++N+L++ +C+   ++EA+ L  +M
Sbjct: 459 TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 518

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
           +  G  P ++TYNTL  G+      E AL+L   +  + V+ D  TY++ I  L +   +
Sbjct: 519 MEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRV 578

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            EA+++F  +  L        YN ++  LCK    + A++ F  +     + + +TY  +
Sbjct: 579 EEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITL 638

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAV 327
           I GL N+  + +  DL  ++    V
Sbjct: 639 IEGLANEDFLKETRDLLRELCSRGV 663



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 156/335 (46%), Gaps = 10/335 (2%)

Query: 31  FVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFN 90
            VD+A +     +GE   PDV     LI  LC     ++A R+       G    V  +N
Sbjct: 65  LVDRATS-----RGEA--PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 117

Query: 91  VIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
            ++   C+ G++D A RL+  M    V P+A+TY+ ++ G C  G++  A  L   M   
Sbjct: 118 TLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 174

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           GC+   V+Y +L+   CK+    +A+ +  EM +KG  P +VTYN +  G+    +V+ A
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
            +    +       DT +Y T + GLC      +  ELF  +    C  +   ++ L+  
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
            C+ G +E A+++   +      A+    NI+I+ +C  G++D A     +M     +P+
Sbjct: 295 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            I + T++ G  R  +     ELL +M  K   P+
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPN 389



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 134/287 (46%), Gaps = 3/287 (1%)

Query: 90  NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
           N  +  L     + EA+RL+D    R   P+ +  + L+   C  G+ + A  +  + E 
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
            G   D  +YN L+ GYC+  +++ A  L   + S  + P   TY  +  GL +  +V  
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           AL L ++M          TY   ++ +CK+    +A+E+   +    C  +I  YN +I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           G+C+ GR++ A E    L       D V+Y  ++ GLC   + +   +LF +M E    P
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           N + F  L+  F R     + I++L +M       + ++ ++V++ +
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTI 330


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 123/363 (33%), Positives = 201/363 (55%), Gaps = 9/363 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N V Y T++ GL   G  D A+ LF +M    + PDVV +N L+H LC      E++
Sbjct: 177 CDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESE 236

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMD---------EASRLLDLMVQRDVRPNAF 122
           RL  +++ +GV P++ TFN+ +  LC+ G +D         EA   L  MV     P+  
Sbjct: 237 RLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDL 296

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TY++++DG+C  G +  A  +       G K D+ +Y  LING+CK+ + + A++++++ 
Sbjct: 297 TYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDG 356

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
           + KG++P++V YNTL  GL +   +  AL+L  EM  +    +  TYN  I+GLCK G +
Sbjct: 357 LGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCV 416

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            +A  L        C  DI  YN LIDG CK  +L+ A E+   +  + +  DV+TYN +
Sbjct: 417 SDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTL 476

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           ++GLC  G+ ++  ++F  MEE    PN+I +  ++    +  K ++ ++LL +MK K +
Sbjct: 477 LNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGL 536

Query: 363 MPD 365
            PD
Sbjct: 537 KPD 539



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 198/377 (52%), Gaps = 7/377 (1%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M NG  E      P+ +TYN+IIDG CK+G V  A  +      +   PD  TY SLI+G
Sbjct: 286 MVNGGFE------PDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLING 339

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
            C   D + A  +F + + +G++PS+V +N ++  L + G +  A +L++ M +    PN
Sbjct: 340 FCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPN 399

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
            +TY+ +++G C  G ++ A  L     + GC  D  +YN LI+GYCK  +++ A  +  
Sbjct: 400 IWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVN 459

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            M S+G+ P V+TYNTL  GL +  + E  +++F+ M+      +  TYN  +D LCK  
Sbjct: 460 RMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAK 519

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA-DVVTY 299
            + EAV+L   +     + D+ ++  L  G CK G ++ A +LFR + ++  V     TY
Sbjct: 520 KVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATY 579

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           NI++        M+ A  LF  M+ +   P+   +  +I GF ++   ++  + L +  E
Sbjct: 580 NIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENME 639

Query: 360 KKVMPDASIVSMVVDLL 376
           K+ +P  +    V++ L
Sbjct: 640 KRFIPSLTTFGRVLNCL 656



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 192/358 (53%), Gaps = 7/358 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY ++I+G CK+G  D+A A+F    G+ + P +V YN+LI GL        A +
Sbjct: 327 KPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQ 386

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM + G  P++ T+N++++ LCK G + +AS L+D  + +   P+ FTY+TL+DG+C
Sbjct: 387 LMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYC 446

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K++ A E+   M S G   D ++YN L+NG CK  + EE + +++ M  KG  P ++
Sbjct: 447 KQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNII 506

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN +   L +  +V  A+ L  EM+   +  D  ++ T   G CK G I  A +LFR +
Sbjct: 507 TYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM 566

Query: 253 GILKCELDI----QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              + + D+      YN ++    +   + +A++LF  +       D  TY ++I G C 
Sbjct: 567 ---EKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCK 623

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            G + + +   L+  E    P++  F  +++     +K  + + ++H M +K ++P+ 
Sbjct: 624 MGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPET 681



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 177/326 (54%), Gaps = 1/326 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G   +P+ V YNT+I GL ++G +  A  L  +M      P++ TYN +I+GLC     
Sbjct: 357 LGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCV 416

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  L  + + +G  P + T+N ++D  CK  K+D A+ +++ M  + + P+  TY+TL
Sbjct: 417 SDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTL 476

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++G C  GK     E+F +ME  GC  + ++YNI+++  CK K+V EA+ L  EM SKG+
Sbjct: 477 LNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGL 536

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAV 246
           KP VV++ TLF G  +I  ++ A +LF  M++  DV   T+TYN  +    +   +  A+
Sbjct: 537 KPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAM 596

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +LF  +    C+ D   Y  +IDG CK G +    +       +  +  + T+  +++ L
Sbjct: 597 KLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCL 656

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVI 332
           C   ++ +A  +   M +  + P  +
Sbjct: 657 CVKDKVHEAVGIIHLMLQKGIVPETV 682



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 184/409 (44%), Gaps = 44/409 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  ++N I++ L + G+ ++A  ++++M+   +  DV TY   I   C       A 
Sbjct: 107 CDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAAL 166

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL   M + G   + V +  ++  L  +G+ D A  L D M+ R + P+   ++ L+   
Sbjct: 167 RLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVL 226

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC---------KNKEVEEALSLYREM 182
           C  G +  +E L G +   G   +  ++NI + G C         +N  V EA    R+M
Sbjct: 227 CKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKM 286

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN--- 239
           V+ G +P  +TYN++  G  +   V+ A ++ ++        D  TY + I+G CK+   
Sbjct: 287 VNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDP 346

Query: 240 --------------------------------GYIVEAVELFRTLGILKCELDIQAYNCL 267
                                           G I+ A++L   +    C  +I  YN +
Sbjct: 347 DRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLV 406

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           I+GLCK G +  A  L      +    D+ TYN +I G C   ++D A ++   M    +
Sbjct: 407 INGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGM 466

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            P+VI + TL++G  +  K  +V+E+   M+EK   P+    +++VD L
Sbjct: 467 TPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSL 515



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 168/356 (47%), Gaps = 9/356 (2%)

Query: 28  KEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVV 87
           ++G V +A   F +M   N +P V ++N++++ L      N+A +++  M D+GVQ  V 
Sbjct: 88  RKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVY 147

Query: 88  TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
           T+ + +   CK  +   A RLL  M +     NA  Y T++ G   +G+ + A ELF  M
Sbjct: 148 TYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEM 207

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
            +     D V++N L++  CK   V E+  L  +++ +G+ P + T+N    GL     +
Sbjct: 208 LARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGAL 267

Query: 208 EHALK---------LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
           + A++            +M       D  TYN+ IDG CK G + +A  + +       +
Sbjct: 268 DRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFK 327

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            D   Y  LI+G CK G  + A+ +F+    + L   +V YN +I GL   G +  A  L
Sbjct: 328 PDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQL 387

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +M EN   PN+  +  +I+G  ++   S    L+     K   PD    + ++D
Sbjct: 388 MNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLID 443



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 146/314 (46%), Gaps = 41/314 (13%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TYNT+IDG CK+  +D A  +  +M  + + PDV+TYN+L++GLC A    E  
Sbjct: 431 CPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVM 490

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M ++G  P+++T+N+I+D LCK  K++EA  LL  M  + ++P+  ++ TL  GF
Sbjct: 491 EIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGF 550

Query: 132 CLTGKINRAEELFGSMESM------------------------------------GCKHD 155
           C  G I+ A +LF  ME                                      GC  D
Sbjct: 551 CKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPD 610

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
           + +Y ++I+G+CK   + +      E + K   P++ T+  +   L    +V  A+ +  
Sbjct: 611 NYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIH 670

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
            M +  +  +  T NT  +    +  +V A ++     + K  +    Y  L DG+    
Sbjct: 671 LMLQKGIVPE--TVNTIFEA---DKKVVAAPKILVEDLLKKGHIAYYTYELLYDGIRDKK 725

Query: 276 RLEIALELFRSLPR 289
            L+  L    SL R
Sbjct: 726 ILKKRLPTVNSLHR 739



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 117/267 (43%), Gaps = 10/267 (3%)

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           +  A TY  ++      G+    E+L   M E++     + +Y   +  Y +  +V+EA+
Sbjct: 37  KHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIEAMKNYGRKGKVQEAV 96

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
             +  M      P+V ++N +   L E      A K++  M+   V +D  TY   I   
Sbjct: 97  DTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSF 156

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           CK      A+ L R +  L C+ +  AY  ++ GL  SG  + A ELF  +  R L  DV
Sbjct: 157 CKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDV 216

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN------KPSKV 350
           V +N ++H LC  G + ++  L   + +  V PN+  F   + G  R        + S+V
Sbjct: 217 VAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRV 276

Query: 351 I---ELLHKMKEKKVMPDASIVSMVVD 374
           +   E L KM      PD    + ++D
Sbjct: 277 VEAEEYLRKMVNGGFEPDDLTYNSIID 303



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 2/205 (0%)

Query: 174 EALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNT 231
           +AL ++    S+ G K T  TY  +   L    + E   KL  EM+ + + A     Y  
Sbjct: 22  KALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIE 81

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            +    + G + EAV+ F  +    C+  + ++N +++ L + G    A +++  +  R 
Sbjct: 82  AMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRG 141

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           + +DV TY I I   C   +   A  L  +M E     N + + T++ G     +     
Sbjct: 142 VQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHAR 201

Query: 352 ELLHKMKEKKVMPDASIVSMVVDLL 376
           EL  +M  + + PD    + +V +L
Sbjct: 202 ELFDEMLARCLCPDVVAFNKLVHVL 226


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 205/364 (56%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY+T+I    + G +  A   F QM    I P+   Y+S+I G C      +AK L
Sbjct: 473 PDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKEL 532

Query: 74  FFEMMDQGV-QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             EM+++G+ +P +V FN +++ LCK+G++ +A  + DL+     RP+  T+++L+DG+C
Sbjct: 533 VSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYC 592

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK+++A ++  +ME +G + D V+Y+ L++GY KN  + + L+L+REM  KG+KP  V
Sbjct: 593 LVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTV 652

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  +  GLF   +   A K F EM         S Y   + GLC+N    EA+ LF+ L
Sbjct: 653 TYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKL 712

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           G +  +  I   N +I+ + K  R E A ELF ++    L+ +  TY +MI  L  DG +
Sbjct: 713 GTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAV 772

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A+++F  ME++ + P   +   +I   +   + +K    L K+  K+++ +AS  S++
Sbjct: 773 EDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLM 832

Query: 373 VDLL 376
           + L 
Sbjct: 833 LSLF 836



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/374 (33%), Positives = 200/374 (53%), Gaps = 16/374 (4%)

Query: 6   GEIGVVC-----------KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTY 54
           GE G  C           KP+ VTYN IID LCK   +DKA+ +  QM      PD VTY
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTY 338

Query: 55  NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
           N +IHG        EA ++F +M  +G+ P++V  N  +  LCK+G+  EA+ + D M  
Sbjct: 339 NCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTA 398

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
           +  +P+  +Y TL+ G+   G       LF SM+S G   D   +NILI+ Y K   V++
Sbjct: 399 KGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDD 458

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           A+ ++ EM  +G+ P VVTY+T+      + ++  A++ F +M    +  +T+ Y++ I 
Sbjct: 459 AMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQ 518

Query: 235 GLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
           G C +G +V+A EL   +   GI +   DI  +N +I+ LCK GR+  A ++F  +    
Sbjct: 519 GFCMHGGLVKAKELVSEMINKGIPR--PDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIG 576

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
              DV+T+  +I G C  G+MDKA  +   ME   V  +++ + TL+ G+ +  + +  +
Sbjct: 577 ERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGL 636

Query: 352 ELLHKMKEKKVMPD 365
            L  +M+ K V P+
Sbjct: 637 TLFREMQRKGVKPN 650



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 121/371 (32%), Positives = 189/371 (50%), Gaps = 9/371 (2%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C PN V YNT+I G  KEG   KA +LF +M  + + PDVVTYN +I  LC A   +
Sbjct: 258 GGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMD 317

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A+ +  +M   G QP  VT+N ++      G++ EA+++   M  R + PN    ++ +
Sbjct: 318 KAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFL 377

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
              C  G+   A E+F SM + G K D VSY  L++GY       + + L+  M S GI 
Sbjct: 378 ASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIA 437

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
                +N L     +   V+ A+ +F EMQ+  V+ D  TY+T I    + G + +A+E 
Sbjct: 438 ADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEK 497

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF-----RSLPRRVLVADVVTYNIMI 303
           F  +     + +   Y+ +I G C  G L  A EL      + +PR     D+V +N +I
Sbjct: 498 FNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPR----PDIVFFNSVI 553

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           + LC DG++  AHD+F  + +    P+VI F +LI G+  + K  K  ++L  M+   V 
Sbjct: 554 NSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVE 613

Query: 364 PDASIVSMVVD 374
            D    S ++D
Sbjct: 614 TDIVTYSTLLD 624



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 188/365 (51%), Gaps = 4/365 (1%)

Query: 14  PNTV-TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           P TV TY+ ++D  C+    D    LF  +    +    +T ++L+  LC+AN   EA  
Sbjct: 154 PLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVN 213

Query: 73  LFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD--VRPNAFTYSTLMD 129
           +    M + G  P+V ++++I+  LC N     A  L  +M +      PN   Y+T++ 
Sbjct: 214 VLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIH 273

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GF   G+  +A  LF  M   G K D V+YN++I+  CK + +++A  + R+M + G +P
Sbjct: 274 GFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQP 333

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             VTYN +  G   + +++ A K+F +M+   +  +    N+F+  LCK+G   EA E+F
Sbjct: 334 DTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIF 393

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
            ++     + DI +Y  L+ G    G     + LF S+    + AD   +NI+IH     
Sbjct: 394 DSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKR 453

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G +D A  +F +M++  V+P+V+ + T+I  F R+ + +  +E  ++M  + + P+ ++ 
Sbjct: 454 GMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVY 513

Query: 370 SMVVD 374
             ++ 
Sbjct: 514 HSIIQ 518



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 128/240 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V +N++I+ LCK+G V  A  +F  +      PDV+T+ SLI G C     ++A +
Sbjct: 543 RPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFK 602

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M   GV+  +VT++ ++D   KNG++++   L   M ++ V+PN  TY  ++ G  
Sbjct: 603 ILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLF 662

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+   A + F  M   G       Y I++ G C+N   +EA+ L++++ +  +K ++ 
Sbjct: 663 RAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSIT 722

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
             NT+   ++++ + E A +LF  +    +  + STY   I  L K+G + +A  +F ++
Sbjct: 723 ILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSM 782



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 114/233 (48%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTY+T++DG  K G ++    LF +M+ + + P+ VTY  ++ GL  A     A++ F E
Sbjct: 617 VTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHE 676

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M++ G   +V  + +I+  LC+N   DEA  L   +   +V+ +    +T+++      +
Sbjct: 677 MIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQR 736

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
              A+ELF ++ + G   ++ +Y ++I    K+  VE+A +++  M   GI P     N 
Sbjct: 737 KEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNR 796

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           +   L E  ++  A     ++    +  + ST +  +    + G   E ++L 
Sbjct: 797 IIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLL 849



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 12/177 (6%)

Query: 210 ALKLFEEMQRDD-----VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ-- 262
           AL LF  + R+      V     TY+  +D  C+       + LF    IL+  L I   
Sbjct: 136 ALALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGC--ILRTGLKIHQI 193

Query: 263 AYNCLIDGLCKSGRLEIALE-LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
             + L+  LC + R E A+  L   +     V +V +Y+I++ GLC++    +A DLF  
Sbjct: 194 TASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQM 253

Query: 322 M--EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           M  E  A +PNV+ + T+IHGF +  +  K   L H+M  + V PD    ++++D L
Sbjct: 254 MAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDAL 310


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 127/363 (34%), Positives = 200/363 (55%), Gaps = 1/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY+ +I+G C  G ++KA  L+ QMK   I P V   NSL+ G   A  W EA +L
Sbjct: 358 PNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKL 417

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E +D GV  ++ T+N++M  LCK GKMDEA  LLD MV + + PN  +Y+ ++ G C 
Sbjct: 418 FDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCR 476

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A  +F  M +   K + V+Y+ILI+G  K  + E+AL L+ +M+S  I PT  T
Sbjct: 477 KGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFT 536

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +NT+  GL ++ Q+  A    +    +       TYN+ +DG  K G I  A+ ++R + 
Sbjct: 537 FNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMC 596

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 ++  Y  LI+G CKS R+++AL+    +  + L  DV  Y+ +I G C    M+
Sbjct: 597 EFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDME 656

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A DLF ++ E  ++PN I++ ++I GF  +N     +    KM   ++  D    + ++
Sbjct: 657 SAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLI 716

Query: 374 DLL 376
           D L
Sbjct: 717 DGL 719



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 113/340 (33%), Positives = 193/340 (56%), Gaps = 4/340 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTY+ +IDG  K+G  +KA  LF QM   NI P   T+N++I+GLC     +EA+ 
Sbjct: 496 KPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARD 555

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
                +++G  PS +T+N I+D   K G +D A  +   M +  V PN  TY++L++GFC
Sbjct: 556 KLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFC 615

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            + +I+ A +    M   G + D  +Y+ LI+G+CK +++E A  L+ E++  G+ P  +
Sbjct: 616 KSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRI 675

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN++  G  +++ +E AL  +++M  D +  D  TY T IDGL K G +V A +L+  +
Sbjct: 676 VYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEM 735

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  DI  ++ L++GLC  G+LE A ++   + R+ +   V+ YN +I G   +G +
Sbjct: 736 LSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNL 795

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVR----INKPS 348
            +A  L  +M +  + P+ + +  LI+G  +    +++PS
Sbjct: 796 KEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRSLSRPS 835



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 176/357 (49%), Gaps = 1/357 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T + ++    KEG V++A+  F + K   +  D   Y+ +I  +C   + N    L  EM
Sbjct: 222 TVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEM 281

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
            ++G  PS  TF  ++      G M EA RL + M+      N    ++LM G+C  G +
Sbjct: 282 KERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNL 341

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  LF  +   G   + V+Y++LI G C +  +E+A  LY +M   GI P+V   N+L
Sbjct: 342 DSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSL 401

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G  +    E A KLF+E   D   A+  TYN  +  LCK G + EA  L   +     
Sbjct: 402 LRGYLKAPLWEEASKLFDEAV-DCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGM 460

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             ++ +YN +I G C+ G +++A  +F  +  R L  +VVTY+I+I G    G  +KA D
Sbjct: 461 VPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALD 520

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           LF  M    +AP    F T+I+G  ++ + S+  + L    E+  +P     + +VD
Sbjct: 521 LFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVD 577



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 199/366 (54%), Gaps = 11/366 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN---P-DVVTYNSLIHGLCHANDWNE 69
           P+  T+ ++I     +G + +A    L++K E IN   P ++V   SL+ G C   + + 
Sbjct: 288 PSEATFTSVIVACVAQGNMVEA----LRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDS 343

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  LF ++ + G+ P+ VT++V+++  C +G +++AS L   M    + P+ F  ++L+ 
Sbjct: 344 ALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLR 403

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           G+        A +LF   E++ C   ++ +YNI+++  CK  +++EA SL   MV++G+ 
Sbjct: 404 GYLKAPLWEEASKLFD--EAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMV 461

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VV+YN + LG      ++ A  +F +M   D+  +  TY+  IDG  K G   +A++L
Sbjct: 462 PNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDL 521

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +  L        +N +I+GLCK G++  A +  ++      +   +TYN ++ G   
Sbjct: 522 FDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIK 581

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           +G +D A  ++ +M E  V+PNV+ + +LI+GF + N+    ++   +M+EK +  D + 
Sbjct: 582 EGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTA 641

Query: 369 VSMVVD 374
            S ++D
Sbjct: 642 YSALID 647



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 121/229 (52%), Gaps = 2/229 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E GV   PN VTY ++I+G CK   +D A     +M+ + +  DV  Y++LI G C   D
Sbjct: 597 EFGV--SPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRD 654

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
              A+ LFFE+++ G+ P+ + +N ++        M+ A      M+   +  +  TY+T
Sbjct: 655 MESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTT 714

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+DG    G++  A +L+  M S G   D +++++L+NG C   ++E A  +  EM  K 
Sbjct: 715 LIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKN 774

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
           + P+V+ YNTL  G F    ++ A  L +EM    +  D  TY+  I+G
Sbjct: 775 MTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823



 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 167/380 (43%), Gaps = 34/380 (8%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           +N +++   +   ++ A   F  M  +++ P V   N L+  L   N   E + L+ +M+
Sbjct: 153 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 212

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            +G+     T +V++    K G+++EA        +R V+ +A  YS ++   C     N
Sbjct: 213 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSN 272

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
              EL   M+  G    + ++  +I        + EAL L  EM++ G    +V   +L 
Sbjct: 273 LGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLM 332

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL------ 252
            G      ++ AL LF ++  D +  +  TY+  I+G C +G I +A EL+  +      
Sbjct: 333 KGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 392

Query: 253 -----------GILKCEL-----------------DIQAYNCLIDGLCKSGRLEIALELF 284
                      G LK  L                 +I  YN ++  LCK G+++ A  L 
Sbjct: 393 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLL 452

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
            ++  + +V +VV+YN MI G C  G MD A  +F DM    + PNV+ +  LI G  + 
Sbjct: 453 DNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKK 512

Query: 345 NKPSKVIELLHKMKEKKVMP 364
               K ++L  +M    + P
Sbjct: 513 GDSEKALDLFDQMLSLNIAP 532



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/340 (22%), Positives = 132/340 (38%), Gaps = 57/340 (16%)

Query: 61  LCHANDWNEAKRLFFEMMDQ-----GV--------------------------------Q 83
           LCH ND   A R F     Q     GV                                 
Sbjct: 68  LCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVSGDSD 127

Query: 84  PSVVTF--------------------NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
           PS V F                    N +++   +  +++ A    + M+ +DV P    
Sbjct: 128 PSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPY 187

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
            + L+        I    +L+  M   G   D  + ++++    K   VEEA   +RE  
Sbjct: 188 MNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETK 247

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
            +G+K     Y+ +   + +       L+L EEM+        +T+ + I      G +V
Sbjct: 248 ERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMV 307

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           EA+ L   +      +++     L+ G C  G L+ AL LF  +    L  + VTY+++I
Sbjct: 308 EALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLI 367

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            G CN G ++KA +L+  M+ N + P+V    +L+ G+++
Sbjct: 368 EGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLK 407



 Score = 38.5 bits (88), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 35/180 (19%), Positives = 74/180 (41%), Gaps = 36/180 (20%)

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR---- 285
           N ++ G      +V    L         ELD + +N L++   ++ R+E A++ F     
Sbjct: 119 NRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMIC 178

Query: 286 ---------------SLPRRVLV----------------ADVVTYNIMIHGLCNDGQMDK 314
                          +L RR ++                 D  T ++M+     +G++++
Sbjct: 179 QDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEE 238

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP-DASIVSMVV 373
           A + F + +E  V  +   +  +I    +    +  +ELL +MKE+  +P +A+  S++V
Sbjct: 239 AEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIV 298


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 121/354 (34%), Positives = 202/354 (57%), Gaps = 5/354 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +TY  ++ GLCK   +D+A+AL  ++ G    P+VV +N+L++G       NEA   
Sbjct: 313 PNDMTYGYLMHGLCKTCRIDEAQALLSKVPG----PNVVHFNTLVNGFVRNGRLNEATAF 368

Query: 74  FFE-MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            ++ M++ G  P V TF+ +++ LCK G    A  L++ M  +  +PN  TY+ L+DGFC
Sbjct: 369 VYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFC 428

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A  +   M + G   + V YN LI+  CK+ ++ EAL ++ EM SKG KP + 
Sbjct: 429 KKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIF 488

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N+L  GL  + ++E AL L+ +M  + V A++ T+NT I    + G I EA++L   +
Sbjct: 489 TFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDM 548

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C LD   YN LI  LCK+G +E  L LF  + R+ L   ++T NI+I+G C  G++
Sbjct: 549 LFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKV 608

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             A +   DM     +P+++ + +LI+G  +  +  + + L  K++ + + PD+
Sbjct: 609 HNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDS 662



 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 198/361 (54%), Gaps = 1/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKAL-FLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           PN V +NT+++G  + G +++A A  + +M      PDV T+++L++GLC    +  A  
Sbjct: 344 PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALE 403

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M  +G +P++ T+ +++D  CK G+++EA  +L  M+ +    N   Y+ L+   C
Sbjct: 404 LVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALC 463

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GKI+ A ++FG M S GCK D  ++N LI G C+  E+E+AL+LYR+MV +G+    V
Sbjct: 464 KHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSV 523

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL        +++ ALKL  +M       D  TYN  I  LCK G + + + LF  +
Sbjct: 524 TFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEM 583

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   I   N LI+G C +G++  ALE  R +  R    D+VTYN +I+GLC  G++
Sbjct: 584 IRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRI 643

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A +LF  ++   + P+ I + TLI    R         LL++  E   +P+    +++
Sbjct: 644 QEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNIL 703

Query: 373 V 373
           V
Sbjct: 704 V 704



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/390 (31%), Positives = 187/390 (47%), Gaps = 40/390 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN++ Y T+ID L K   VD+A  L  +M      PDV T+N++I+G C  N   E  
Sbjct: 241 CVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGA 300

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M+ +G  P+ +T+  +M  LCK  ++DEA  LL     +   PN   ++TL++GF
Sbjct: 301 KLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALL----SKVPGPNVVHFNTLVNGF 356

Query: 132 CLTGKINRAEEL-FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
              G++N A    +  M + G   D  +++ L+NG CK      AL L  +M +KG KP 
Sbjct: 357 VRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPN 416

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           + TY  L  G  +  Q+E A  +  EM     + +T  YN  I  LCK+G I EA+++F 
Sbjct: 417 LNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFG 476

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH------ 304
            +    C+ DI  +N LI GLC+   +E AL L+R +    ++A+ VT+N +IH      
Sbjct: 477 EMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRG 536

Query: 305 -----------------------------GLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
                                         LC  G ++K   LF +M    + P++I   
Sbjct: 537 EIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCN 596

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            LI+GF    K    +E +  M  +   PD
Sbjct: 597 ILINGFCTAGKVHNALEFMRDMIHRGFSPD 626



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/293 (36%), Positives = 160/293 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN  TY  +IDG CK+G +++A  +  +M  +  + + V YN+LI  LC     +EA 
Sbjct: 413 CKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEAL 472

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F EM  +G +P + TFN ++  LC+  +M++A  L   MV   V  N+ T++TL+  F
Sbjct: 473 DMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAF 532

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+I  A +L   M   GC  D+++YN LI   CK   VE+ L L+ EM+ KG+ P++
Sbjct: 533 LRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSI 592

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +T N L  G     +V +AL+   +M     + D  TYN+ I+GLCK G I EA+ LF  
Sbjct: 593 ITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEK 652

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           L     + D   YN LI  LC+ G  + A  L         V + VT+NI+++
Sbjct: 653 LQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVY 705



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 184/363 (50%), Gaps = 5/363 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+  +YN ++D L        A  +F  M  + ++P+  T+  ++  LC  N+ + A 
Sbjct: 171 CEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNAC 230

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +M   G  P+ + +  ++D L K  ++DEA +LL+ M      P+  T++T++ GF
Sbjct: 231 LLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGF 290

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++    +L   M   G   +D++Y  L++G CK   ++EA +L    +SK   P V
Sbjct: 291 CRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQAL----LSKVPGPNV 346

Query: 192 VTYNTLFLGLFEIHQVEHALKL-FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V +NTL  G     ++  A    +++M  +    D  T++T ++GLCK G    A+EL  
Sbjct: 347 VHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVN 406

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C+ ++  Y  LIDG CK G+LE A  + R +  +    + V YN +I  LC  G
Sbjct: 407 DMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHG 466

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++ +A D+F +M      P++  F +LI G  R+++    + L   M  + V+ ++   +
Sbjct: 467 KIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFN 526

Query: 371 MVV 373
            ++
Sbjct: 527 TLI 529



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 90/171 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  + +TYN +I  LCK G V+K   LF +M  + + P ++T N LI+G C A   + A 
Sbjct: 553 CPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNAL 612

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
               +M+ +G  P +VT+N +++ LCK G++ EA  L + +    ++P++ TY+TL+   
Sbjct: 613 EFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWL 672

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           C  G  + A  L       G   +DV++NIL+  + K    E     Y + 
Sbjct: 673 CREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSEGQTITYAQF 723



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/296 (20%), Positives = 116/296 (39%), Gaps = 36/296 (12%)

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            +G   S   + +++D+L          RLL  M +  +      +  +M  +   G   
Sbjct: 97  QKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPG 156

Query: 139 RAEELFGSMESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           +A  L   M+ + C      SYN++++          A +++ +M+SKG+ P   T+  +
Sbjct: 157 QATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLV 216

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
              L  +++V++A  L  +M +     ++  Y T                          
Sbjct: 217 MKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQT-------------------------- 250

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
                    LID L K  R++ AL+L   +       DV T+N +I+G C   ++ +   
Sbjct: 251 ---------LIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAK 301

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           L   M      PN + +  L+HG  +  +  +   LL K+    V+   ++V+  V
Sbjct: 302 LVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFV 357


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 125/353 (35%), Positives = 199/353 (56%), Gaps = 5/353 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + +TY  ++ GLC+ G VD+A+AL  ++     NP+ V YN+LI G   +  + EAK L 
Sbjct: 309 DALTYGYLMHGLCRMGQVDEARALLNKIP----NPNTVLYNTLISGYVASGRFEEAKDLL 364

Query: 75  FE-MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           +  M+  G +P   TFN+++D L K G +  A  LL+ MV +   PN  TY+ L++GFC 
Sbjct: 365 YNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCK 424

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A E+  SM + G   + V YN LI   CK+  +EEAL L+ EM  KG KP + T
Sbjct: 425 QGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYT 484

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N+L  GL + H++E AL L+ +M  + V A+T TYNT +        I +A +L   + 
Sbjct: 485 FNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEML 544

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C LD   YN LI  LCK+G +E  L LF  +  + +   +++ NI+I GLC  G+++
Sbjct: 545 FRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVN 604

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            A     DM    + P+++ + +LI+G  ++    +   L +K++ + + PDA
Sbjct: 605 DALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDA 657



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/346 (33%), Positives = 179/346 (51%), Gaps = 5/346 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P   T+  ++  LC    VD A +L   M      P+ V Y +LIH LC  N  +EA +
Sbjct: 202 SPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQ 261

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M     +P V TFN ++  LC+ G++ EA++LLD M+ R    +A TY  LM G C
Sbjct: 262 LLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLC 321

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS-LYREMVSKGIKPTV 191
             G+++ A  L   + +     + V YN LI+GY  +   EEA   LY  MV  G +P  
Sbjct: 322 RMGQVDEARALLNKIPN----PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDA 377

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+N +  GL +   +  AL+L  EM       +  TY   I+G CK G + EA E+  +
Sbjct: 378 YTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNS 437

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +      L+   YNCLI  LCK G +E AL+LF  +  +    D+ T+N +I+GLC + +
Sbjct: 438 MSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHK 497

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           M++A  L+ DM    V  N + + TL+H F+  +   +  +L+ +M
Sbjct: 498 MEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEM 543



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/292 (36%), Positives = 157/292 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +TY  +I+G CK+G +++A  +   M  + ++ + V YN LI  LC   +  EA +
Sbjct: 409 EPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQ 468

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  +G +P + TFN +++ LCKN KM+EA  L   M    V  N  TY+TL+  F 
Sbjct: 469 LFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFL 528

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +   I +A +L   M   GC  D+++YN LI   CK   VE+ L L+ EM+ KGI PT++
Sbjct: 529 MRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTII 588

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           + N L  GL    +V  ALK  ++M    +  D  TYN+ I+GLCK G++ EA  LF  L
Sbjct: 589 SCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKL 648

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
                  D   YN LI   C  G    A  L         + + VT++I+I+
Sbjct: 649 QSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILIN 700



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 176/347 (50%), Gaps = 5/347 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P   +YN ++D L        A  +F  M    ++P V T+  ++  LC  ++ + A 
Sbjct: 166 CDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSAC 225

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +M   G  P+ V +  ++  LC+N ++ EA +LL+ M      P+  T++ ++ G 
Sbjct: 226 SLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGL 285

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+I+ A +L   M   G   D ++Y  L++G C+  +V+EA    R +++K   P  
Sbjct: 286 CRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEA----RALLNKIPNPNT 341

Query: 192 VTYNTLFLGLFEIHQVEHALK-LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V YNTL  G     + E A   L+  M       D  T+N  IDGL K GY+V A+EL  
Sbjct: 342 VLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLN 401

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +   + E ++  Y  LI+G CK GRLE A E+  S+  + L  + V YN +I  LC DG
Sbjct: 402 EMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDG 461

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            +++A  LF +M      P++  F +LI+G  + +K  + + L H M
Sbjct: 462 NIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDM 508



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 115/193 (59%), Gaps = 1/193 (0%)

Query: 6   GEI-GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           GE+ G  CKP+  T+N++I+GLCK   +++A +L+  M  E +  + VTYN+L+H     
Sbjct: 471 GEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMR 530

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
           +   +A +L  EM+ +G     +T+N ++  LCK G +++   L + M+ + + P   + 
Sbjct: 531 DSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISC 590

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + L+ G C TGK+N A +    M   G   D V+YN LING CK   V+EA +L+ ++ S
Sbjct: 591 NILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQS 650

Query: 185 KGIKPTVVTYNTL 197
           +GI+P  +TYNTL
Sbjct: 651 EGIRPDAITYNTL 663



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 146/341 (42%), Gaps = 41/341 (12%)

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR-LLDL---- 111
           LI  L    D+   ++L  +M D+G+      F +IM    K G   +A+R LLD+    
Sbjct: 105 LIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVY 164

Query: 112 -------------------------------MVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
                                          M+ R V P  +T+  +M   C+  +++ A
Sbjct: 165 SCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSA 224

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
             L   M   GC  + V Y  LI+  C+N  V EAL L  +M     +P V T+N +  G
Sbjct: 225 CSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHG 284

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
           L    ++  A KL + M     + D  TY   + GLC+ G + EA  L   +       +
Sbjct: 285 LCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP----NPN 340

Query: 261 IQAYNCLIDGLCKSGRLEIALE-LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
              YN LI G   SGR E A + L+ ++       D  T+NIMI GL   G +  A +L 
Sbjct: 341 TVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELL 400

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +M      PNVI +  LI+GF +  +  +  E+++ M  K
Sbjct: 401 NEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAK 441



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 89/153 (58%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  + +TYN +I  LCK G V+K   LF +M G+ I P +++ N LI GLC     N+A 
Sbjct: 548 CPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDAL 607

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +   +M+ +G+ P +VT+N +++ LCK G + EAS L + +    +RP+A TY+TL+   
Sbjct: 608 KFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRH 667

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
           C  G  N A  L       G   ++V+++ILIN
Sbjct: 668 CHEGMFNDACLLLYKGVDSGFIPNEVTWSILIN 700


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 127/363 (34%), Positives = 200/363 (55%), Gaps = 1/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY+ +I+G C  G ++KA  L+ QMK   I P V   NSL+ G   A  W EA +L
Sbjct: 398 PNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKL 457

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E +D GV  ++ T+N++M  LCK GKMDEA  LLD MV + + PN  +Y+ ++ G C 
Sbjct: 458 FDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCR 516

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A  +F  M +   K + V+Y+ILI+G  K  + E+AL L+ +M+S  I PT  T
Sbjct: 517 KGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFT 576

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +NT+  GL ++ Q+  A    +    +       TYN+ +DG  K G I  A+ ++R + 
Sbjct: 577 FNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMC 636

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 ++  Y  LI+G CKS R+++AL+    +  + L  DV  Y+ +I G C    M+
Sbjct: 637 EFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDME 696

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A DLF ++ E  ++PN I++ ++I GF  +N     +    KM   ++  D    + ++
Sbjct: 697 SAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLI 756

Query: 374 DLL 376
           D L
Sbjct: 757 DGL 759



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 113/340 (33%), Positives = 193/340 (56%), Gaps = 4/340 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTY+ +IDG  K+G  +KA  LF QM   NI P   T+N++I+GLC     +EA+ 
Sbjct: 536 KPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARD 595

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
                +++G  PS +T+N I+D   K G +D A  +   M +  V PN  TY++L++GFC
Sbjct: 596 KLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFC 655

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            + +I+ A +    M   G + D  +Y+ LI+G+CK +++E A  L+ E++  G+ P  +
Sbjct: 656 KSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRI 715

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN++  G  +++ +E AL  +++M  D +  D  TY T IDGL K G +V A +L+  +
Sbjct: 716 VYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEM 775

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  DI  ++ L++GLC  G+LE A ++   + R+ +   V+ YN +I G   +G +
Sbjct: 776 LSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNL 835

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVR----INKPS 348
            +A  L  +M +  + P+ + +  LI+G  +    +++PS
Sbjct: 836 KEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRSLSRPS 875



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 176/357 (49%), Gaps = 1/357 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T + ++    KEG V++A+  F + K   +  D   Y+ +I  +C   + N    L  EM
Sbjct: 262 TVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEM 321

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
            ++G  PS  TF  ++      G M EA RL + M+      N    ++LM G+C  G +
Sbjct: 322 KERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNL 381

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  LF  +   G   + V+Y++LI G C +  +E+A  LY +M   GI P+V   N+L
Sbjct: 382 DSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSL 441

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G  +    E A KLF+E   D   A+  TYN  +  LCK G + EA  L   +     
Sbjct: 442 LRGYLKAPLWEEASKLFDEAV-DCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGM 500

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             ++ +YN +I G C+ G +++A  +F  +  R L  +VVTY+I+I G    G  +KA D
Sbjct: 501 VPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALD 560

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           LF  M    +AP    F T+I+G  ++ + S+  + L    E+  +P     + +VD
Sbjct: 561 LFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVD 617



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 199/366 (54%), Gaps = 11/366 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN---P-DVVTYNSLIHGLCHANDWNE 69
           P+  T+ ++I     +G + +A    L++K E IN   P ++V   SL+ G C   + + 
Sbjct: 328 PSEATFTSVIVACVAQGNMVEA----LRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDS 383

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  LF ++ + G+ P+ VT++V+++  C +G +++AS L   M    + P+ F  ++L+ 
Sbjct: 384 ALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLR 443

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           G+        A +LF   E++ C   ++ +YNI+++  CK  +++EA SL   MV++G+ 
Sbjct: 444 GYLKAPLWEEASKLFD--EAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMV 501

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VV+YN + LG      ++ A  +F +M   D+  +  TY+  IDG  K G   +A++L
Sbjct: 502 PNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDL 561

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +  L        +N +I+GLCK G++  A +  ++      +   +TYN ++ G   
Sbjct: 562 FDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIK 621

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           +G +D A  ++ +M E  V+PNV+ + +LI+GF + N+    ++   +M+EK +  D + 
Sbjct: 622 EGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTA 681

Query: 369 VSMVVD 374
            S ++D
Sbjct: 682 YSALID 687



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 121/229 (52%), Gaps = 2/229 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E GV   PN VTY ++I+G CK   +D A     +M+ + +  DV  Y++LI G C   D
Sbjct: 637 EFGV--SPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRD 694

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
              A+ LFFE+++ G+ P+ + +N ++        M+ A      M+   +  +  TY+T
Sbjct: 695 MESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTT 754

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+DG    G++  A +L+  M S G   D +++++L+NG C   ++E A  +  EM  K 
Sbjct: 755 LIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKN 814

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
           + P+V+ YNTL  G F    ++ A  L +EM    +  D  TY+  I+G
Sbjct: 815 MTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 863



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 167/380 (43%), Gaps = 34/380 (8%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           +N +++   +   ++ A   F  M  +++ P V   N L+  L   N   E + L+ +M+
Sbjct: 193 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 252

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            +G+     T +V++    K G+++EA        +R V+ +A  YS ++   C     N
Sbjct: 253 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSN 312

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
              EL   M+  G    + ++  +I        + EAL L  EM++ G    +V   +L 
Sbjct: 313 LGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLM 372

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL------ 252
            G      ++ AL LF ++  D +  +  TY+  I+G C +G I +A EL+  +      
Sbjct: 373 KGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 432

Query: 253 -----------GILKCEL-----------------DIQAYNCLIDGLCKSGRLEIALELF 284
                      G LK  L                 +I  YN ++  LCK G+++ A  L 
Sbjct: 433 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLL 492

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
            ++  + +V +VV+YN MI G C  G MD A  +F DM    + PNV+ +  LI G  + 
Sbjct: 493 DNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKK 552

Query: 345 NKPSKVIELLHKMKEKKVMP 364
               K ++L  +M    + P
Sbjct: 553 GDSEKALDLFDQMLSLNIAP 572



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/340 (22%), Positives = 132/340 (38%), Gaps = 57/340 (16%)

Query: 61  LCHANDWNEAKRLFFEMMDQ-----GV--------------------------------Q 83
           LCH ND   A R F     Q     GV                                 
Sbjct: 108 LCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVSGDSD 167

Query: 84  PSVVTF--------------------NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
           PS V F                    N +++   +  +++ A    + M+ +DV P    
Sbjct: 168 PSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPY 227

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
            + L+        I    +L+  M   G   D  + ++++    K   VEEA   +RE  
Sbjct: 228 MNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETK 287

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
            +G+K     Y+ +   + +       L+L EEM+        +T+ + I      G +V
Sbjct: 288 ERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMV 347

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           EA+ L   +      +++     L+ G C  G L+ AL LF  +    L  + VTY+++I
Sbjct: 348 EALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLI 407

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            G CN G ++KA +L+  M+ N + P+V    +L+ G+++
Sbjct: 408 EGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLK 447



 Score = 38.1 bits (87), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 35/180 (19%), Positives = 74/180 (41%), Gaps = 36/180 (20%)

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR---- 285
           N ++ G      +V    L         ELD + +N L++   ++ R+E A++ F     
Sbjct: 159 NRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMIC 218

Query: 286 ---------------SLPRRVLV----------------ADVVTYNIMIHGLCNDGQMDK 314
                          +L RR ++                 D  T ++M+     +G++++
Sbjct: 219 QDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEE 278

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP-DASIVSMVV 373
           A + F + +E  V  +   +  +I    +    +  +ELL +MKE+  +P +A+  S++V
Sbjct: 279 AEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIV 338


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 120/354 (33%), Positives = 203/354 (57%), Gaps = 5/354 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN+ TY  ++ GLC+ G VD+A+ L  ++     NP+VV +N+LI+G       +EAK +
Sbjct: 338 PNSFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAV 393

Query: 74  FFE-MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             E M+  G  P + T+N ++  LCK G +  A  L++ M  +   PN  TY+ L+D FC
Sbjct: 394 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 453

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A  +   M   G   + V YN LI+  CK+++V++AL+++ +M SKG KP + 
Sbjct: 454 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 513

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N+L  GL ++++ E AL L+++M  + V A+T TYNT I    + G + EA++L   +
Sbjct: 514 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 573

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C LD   YN LI  LC++G +E  L LF  +  + L  + ++ NI+I+GLC  G +
Sbjct: 574 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 633

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             A +   DM    + P+++ + +LI+G  +  +  + + L  K++ + + PDA
Sbjct: 634 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDA 687



 Score =  224 bits (571), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 122/329 (37%), Positives = 185/329 (56%), Gaps = 1/329 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQ-MKGENINPDVVTYNSLIHGLCHANDWNE 69
           V  PN V +NT+I+G    G +D+AKA+  + M      PD+ TYN+LI GLC       
Sbjct: 366 VPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVS 425

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+ L  EM  +G +P+V+T+ +++D  CK G+++EA  +LD M  + +  NA  Y+ L+ 
Sbjct: 426 ARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLIS 485

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             C   K+  A  +FG M S GCK D  ++N LI G CK  + EEAL LY++M+ +G+  
Sbjct: 486 ALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIA 545

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             +TYNTL         ++ ALKL  +M       D  TYN  I  LC+ G I + + LF
Sbjct: 546 NTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALF 605

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +       +  + N LI+GLC++G ++ ALE  R +  R L  D+VTYN +I+GLC  
Sbjct: 606 EDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKT 665

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           G+  +A +LF  ++   + P+ I + TLI
Sbjct: 666 GRAQEALNLFDKLQVEGICPDAITYNTLI 694



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/339 (33%), Positives = 181/339 (53%), Gaps = 6/339 (1%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V C P+  TYNT+I GLCK+G++  A+ L  +M+ +   P+V+TY  LI   C     
Sbjct: 399 LSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRL 458

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA+ +  EM  +G+  + V +N ++  LCK+ K+ +A  +   M  +  +P+ FT+++L
Sbjct: 459 EEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSL 518

Query: 128 MDGFCLTGKINRAEELFGSMESM---GCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + G C   K+N+ EE  G  + M   G   + ++YN LI+ + +   ++EAL L  +M+ 
Sbjct: 519 IFGLC---KVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 575

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           +G     +TYN L   L     +E  L LFE+M    +  +  + N  I+GLC+ G I  
Sbjct: 576 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 635

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A+E  R +       DI  YN LI+GLCK+GR + AL LF  L    +  D +TYN +I 
Sbjct: 636 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 695

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
             C +G  D AH L     ++   PN + +  L+  F++
Sbjct: 696 WHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 734



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/346 (34%), Positives = 175/346 (50%), Gaps = 5/346 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P   T+  ++  LC    VD A AL   M      P+ + Y +LIH L      NE  +
Sbjct: 232 SPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLK 291

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+  G  P V TFN  +  LCK  ++ EA++L+D M+ R   PN+FTY  LM G C
Sbjct: 292 LLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLC 351

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE-MVSKGIKPTV 191
             GK++ A  L   + +     + V +N LINGY     ++EA ++  E M+S G  P +
Sbjct: 352 RMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDI 407

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYNTL LGL +   +  A +L  EMQ      +  TY   ID  CK G + EA  +   
Sbjct: 408 FTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDE 467

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +      L+   YNCLI  LCK  +++ AL +F  +  +    D+ T+N +I GLC   +
Sbjct: 468 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 527

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            ++A  L+ DM    V  N I + TLIH F+R     + ++L++ M
Sbjct: 528 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 573



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 166/363 (45%), Gaps = 33/363 (9%)

Query: 28  KEGFVDKAKALFLQMKG-ENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           + G   +A  L L M+G  +  P   +YN ++  L   N       +F+EM+ +G+ P+V
Sbjct: 176 RAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTV 235

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
            TF V+M  LC   ++D A  LL  M +    PNA  Y TL+      G++N   +L   
Sbjct: 236 YTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEE 295

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M  MGC  D  ++N  I+G CK   + EA  L   M+ +G  P   TY  L  GL  + +
Sbjct: 296 MLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGK 355

Query: 207 VEHALKLFEEMQRDDV--------------------------------AADTSTYNTFID 234
           V+ A  L  ++   +V                                  D  TYNT I 
Sbjct: 356 VDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLIL 415

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
           GLCK GY+V A EL   + I  CE ++  Y  LID  CK GRLE A  +   +  + L  
Sbjct: 416 GLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL 475

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           + V YN +I  LC D ++  A ++F DM      P++  F +LI G  ++NK  + + L 
Sbjct: 476 NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY 535

Query: 355 HKM 357
             M
Sbjct: 536 QDM 538



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 76/156 (48%), Gaps = 1/156 (0%)

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL-GILKCELDIQAYNCLIDGL 271
           L  +M+++ +    S +   +    + G   +A  L   + G+  CE   ++YN ++D L
Sbjct: 151 LLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVL 210

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
                 ++   +F  +  + +   V T+ +++  LC   ++D A  L  DM  +   PN 
Sbjct: 211 LAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNA 270

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           I++ TLIH   ++ + ++V++LL +M     +PD +
Sbjct: 271 IVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVN 306



 Score = 38.5 bits (88), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 22/106 (20%), Positives = 49/106 (46%)

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           +  +  ++  LC    ++ A  L + + R   V + + Y  +IH L   G++++   L  
Sbjct: 235 VYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLE 294

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +M      P+V  F   IHG  ++ +  +  +L+ +M  +   P++
Sbjct: 295 EMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNS 340


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/398 (32%), Positives = 205/398 (51%), Gaps = 40/398 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TYN I++GLC+E  +D+AK +  +M      PDVVTYNS I GLC  +  +EA+
Sbjct: 111 CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEAR 170

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +    M    V P VV++  +++ LCK+G +D ASR+LD M  R   P+  TYS+L+DGF
Sbjct: 171 KFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGF 227

Query: 132 CLTGKINRAEELFGSMESMGCKH-----------------------------------DD 156
           C  G++ RA  L  SM  +GC+                                    D 
Sbjct: 228 CKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDV 287

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           VSYN  I+G CK + V++A +++  MV +G  P   +Y+ L   L +  +++ A+ L E+
Sbjct: 288 VSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQ 347

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF-RTLGILKCELDIQAYNCLIDGLCKSG 275
            +      D   Y   +DGLCK G   EA  LF + L    CE D+  YN ++D  CK  
Sbjct: 348 AREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRR 407

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           +++ AL++ + +  R    +VVT+NI++HGLC D ++  A  + L M +    P+ + + 
Sbjct: 408 QIDKALQIHKQMLERN-CCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYG 466

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           TL+    +  K +  +EL  +  +   +PD    S ++
Sbjct: 467 TLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALI 504



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 190/365 (52%), Gaps = 3/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+  T+  ++ GLC+   ++KA+ L  +MK     PD   YN+LI G   A D+ +A 
Sbjct: 6   CQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAF 65

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +   EM+     P+VVT+  I+D LCK G+  +A +LLD M  +   PN +TY+ +++G 
Sbjct: 66  KFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL 125

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++ A+++   M   G   D V+YN  I G CK   V+EA      M    + P V
Sbjct: 126 CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDV 182

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+Y T+  GL +   ++ A ++ ++M       D  TY++ IDG CK G +  A+ L  +
Sbjct: 183 VSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDS 242

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  L C  ++ AYN L+  L + G +  A ++   + RR    DVV+YN  I GLC   +
Sbjct: 243 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 302

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + KA  +F  M E    PN   +  L+    +  +    I L+ + +EK  + D  + ++
Sbjct: 303 VKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTV 362

Query: 372 VVDLL 376
           ++D L
Sbjct: 363 LLDGL 367



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 169/335 (50%), Gaps = 3/335 (0%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           M  ++  PD  T+  L+ GLC +N   +A++L   M + G  P    +N ++    K   
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
             +A + L  MV+    P   TY+ ++DG C  G+   A +L   M   GC  +  +YN+
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           ++ G C+ ++++EA  +  EM  +G  P VVTYN+   GL +  +V+ A K    M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP--- 177

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           V  D  +Y T I+GLCK+G +  A  +   +    C  D+  Y+ LIDG CK G +E A+
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            L  S+ +     ++V YN ++  L   G + KA D+ ++ME     P+V+ +   I G 
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +  +  K   +  +M E+   P+AS  SM+V+ L
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPNASSYSMLVEEL 332



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 190/367 (51%), Gaps = 10/367 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN V YN+++  L + G + KA+ + ++M+     PDVV+YN+ I GLC A    +AK
Sbjct: 248 CRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAK 307

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M+++G  P+  +++++++ELCK  ++D+A  L++   ++    +   Y+ L+DG 
Sbjct: 308 AVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGL 367

Query: 132 CLTGKINRAEELFGS-MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           C  G+ + A  LF   ++   C+ D   YN++++ +CK +++++AL ++++M+ +     
Sbjct: 368 CKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CN 426

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVT+N L  GL    ++  A  +   M  +    D  TY T +D +CK G    A+ELF 
Sbjct: 427 VVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFE 486

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
                 C  D+  Y+ LI GL      E A  LF  L       DV  +N MI G   +G
Sbjct: 487 EAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL-------DVALWNAMILGYAENG 539

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHG-FVRINKPSKVIELLHKMKEKKVMPDASIV 369
             D    LF+++ E+ V PN   F   I G  V+     K   L  +  +    PD  + 
Sbjct: 540 SGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVA 599

Query: 370 SMVVDLL 376
           + ++D+ 
Sbjct: 600 NTLIDVF 606



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 9/243 (3%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +C+P+   YN ++D  CK   +DKA  +  QM   N   +VVT+N L+HGLC  +  ++A
Sbjct: 388 ICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDA 446

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           + +   M+D+G  P  VT+  ++D +CK GK   A  L +  V+    P+  TYS L+ G
Sbjct: 447 ETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITG 506

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
                    A  LF        K D   +N +I GY +N   +  L L+ E++   ++P 
Sbjct: 507 LVHENMAEEAYLLFT-------KLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPN 559

Query: 191 VVTYNTLFLG-LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             T+     G L +   +  A  LF+   +     D    NT ID   K G + EA  +F
Sbjct: 560 ARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIF 619

Query: 250 RTL 252
            ++
Sbjct: 620 YSM 622


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 192/360 (53%), Gaps = 3/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +   T+I G C+ G   KA  +   ++G    PDV+TYN +I G C A + N A  +
Sbjct: 135 PDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSV 194

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M    V P VVT+N I+  LC +GK+ +A  +LD M+QRD  P+  TY+ L++  C 
Sbjct: 195 LDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              + +A +L   M   GC  D V+YN+L+NG CK   ++EA+    +M S G +P V+T
Sbjct: 252 DSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N +   +    +   A KL  +M R   +    T+N  I+ LC+ G +  A+++   + 
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C+ +  +YN L+ G CK  +++ A+E    +  R    D+VTYN M+  LC DG+++
Sbjct: 372 KHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A ++   +     +P +I + T+I G  +  K  K I+LL +M+ K + PD    S +V
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491



 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 194/356 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY  +I+  C++  V +A  L  +M+     PDVVTYN L++G+C     +EA 
Sbjct: 235 CYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +   +M   G QP+V+T N+I+  +C  G+  +A +LL  M+++   P+  T++ L++  
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + RA ++   M   GC+ + +SYN L++G+CK K+++ A+     MVS+G  P +
Sbjct: 355 CRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNT+   L +  +VE A+++  ++     +    TYNT IDGL K G   +A++L   
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D   Y+ L+ GL + G+++ A++ F    R  +  + VT+N ++ GLC   Q
Sbjct: 475 MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQ 534

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            D+A D  + M      P    +  LI G        + +ELL+++  K +M  +S
Sbjct: 535 TDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKRSS 590



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 195/363 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNTI+  LC  G + +A  +  +M   +  PDV+TY  LI   C  +   +A +L
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKL 261

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM D+G  P VVT+NV+++ +CK G++DEA + L+ M     +PN  T++ ++   C 
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG+   AE+L   M   G     V++NILIN  C+   +  A+ +  +M   G +P  ++
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLS 381

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +  +++ A++  E M       D  TYNT +  LCK+G + +AVE+   L 
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C   +  YN +IDGL K+G+   A++L   +  + L  D +TY+ ++ GL  +G++D
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A   F + E   V PN + F +++ G  +  +  + I+ L  M  +   P  +  ++++
Sbjct: 502 EAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILI 561

Query: 374 DLL 376
           + L
Sbjct: 562 EGL 564



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 188/353 (53%), Gaps = 3/353 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TYN +I G CK G ++ A ++  +M   +++PDVVTYN+++  LC +    +A  +
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEV 226

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+ +   P V+T+ ++++  C++  + +A +LLD M  R   P+  TY+ L++G C 
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A +    M S GC+ + +++NI++   C      +A  L  +M+ KG  P+VVT
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L   L     +  A+ + E+M +     ++ +YN  + G CK   +  A+E    + 
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  DI  YN ++  LCK G++E A+E+   L  +     ++TYN +I GL   G+  
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           KA  L  +M    + P+ I + +L+ G  R  K  + I+  H+ +   V P+A
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNA 519



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 166/326 (50%), Gaps = 8/326 (2%)

Query: 41  QMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
           Q++   +N     +++L  G  H+N         F   +       V  N  + +L + G
Sbjct: 62  QVESSGLNGRAQKFDTLASG--HSNSNGNG---HFSSANSSFVLEDVESNNHLRQLVRTG 116

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           +++E  + L+ MV     P+    +TL+ GFC  GK  +A ++   +E  G   D ++YN
Sbjct: 117 ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYN 176

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           ++I+GYCK  E+  ALS+   M    + P VVTYNT+   L +  +++ A+++ + M + 
Sbjct: 177 VMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
           D   D  TY   I+  C++  + +A++L   +    C  D+  YN L++G+CK GRL+ A
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           ++    +P      +V+T+NI++  +C+ G+   A  L  DM     +P+V+ F  LI+ 
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDA 366
             R     + I++L KM +    P++
Sbjct: 354 LCRKGLLGRAIDILEKMPKHGCQPNS 379



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 157/314 (50%), Gaps = 3/314 (0%)

Query: 52  VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL 111
           V  N+ +  L    +  E  +    M+  G  P ++    ++   C+ GK  +A+++L++
Sbjct: 103 VESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEV 162

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           +      P+  TY+ ++ G+C  G+IN A      ++ M    D V+YN ++   C + +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNA---LSVLDRMSVSPDVVTYNTILRSLCDSGK 219

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           +++A+ +   M+ +   P V+TY  L         V  A+KL +EM+      D  TYN 
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNV 279

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            ++G+CK G + EA++    +    C+ ++  +N ++  +C +GR   A +L   + R+ 
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
               VVT+NI+I+ LC  G + +A D+   M ++   PN + +  L+HGF +  K  + I
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 352 ELLHKMKEKKVMPD 365
           E L +M  +   PD
Sbjct: 400 EYLERMVSRGCYPD 413



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 116/239 (48%), Gaps = 6/239 (2%)

Query: 141 EELFGSMESM---GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           EE F  +E+M   G   D +    LI G+C+  +  +A  +   +   G  P V+TYN +
Sbjct: 119 EEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVM 178

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G  +  ++ +AL + + M    V+ D  TYNT +  LC +G + +A+E+   +    C
Sbjct: 179 ISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D+  Y  LI+  C+   +  A++L   +  R    DVVTYN++++G+C +G++D+A  
Sbjct: 236 YPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              DM  +   PNVI    ++       +     +LL  M  K   P     +++++ L
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 120/354 (33%), Positives = 203/354 (57%), Gaps = 5/354 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN+ TY  ++ GLC+ G VD+A+ L  ++     NP+VV +N+LI+G       +EAK +
Sbjct: 320 PNSFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAV 375

Query: 74  FFE-MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             E M+  G  P + T+N ++  LCK G +  A  L++ M  +   PN  TY+ L+D FC
Sbjct: 376 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 435

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A  +   M   G   + V YN LI+  CK+++V++AL+++ +M SKG KP + 
Sbjct: 436 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 495

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N+L  GL ++++ E AL L+++M  + V A+T TYNT I    + G + EA++L   +
Sbjct: 496 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 555

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C LD   YN LI  LC++G +E  L LF  +  + L  + ++ NI+I+GLC  G +
Sbjct: 556 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 615

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             A +   DM    + P+++ + +LI+G  +  +  + + L  K++ + + PDA
Sbjct: 616 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDA 669



 Score =  224 bits (571), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 122/329 (37%), Positives = 185/329 (56%), Gaps = 1/329 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQ-MKGENINPDVVTYNSLIHGLCHANDWNE 69
           V  PN V +NT+I+G    G +D+AKA+  + M      PD+ TYN+LI GLC       
Sbjct: 348 VPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVS 407

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+ L  EM  +G +P+V+T+ +++D  CK G+++EA  +LD M  + +  NA  Y+ L+ 
Sbjct: 408 ARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLIS 467

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             C   K+  A  +FG M S GCK D  ++N LI G CK  + EEAL LY++M+ +G+  
Sbjct: 468 ALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIA 527

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             +TYNTL         ++ ALKL  +M       D  TYN  I  LC+ G I + + LF
Sbjct: 528 NTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALF 587

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +       +  + N LI+GLC++G ++ ALE  R +  R L  D+VTYN +I+GLC  
Sbjct: 588 EDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKT 647

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           G+  +A +LF  ++   + P+ I + TLI
Sbjct: 648 GRAQEALNLFDKLQVEGICPDAITYNTLI 676



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/339 (33%), Positives = 181/339 (53%), Gaps = 6/339 (1%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V C P+  TYNT+I GLCK+G++  A+ L  +M+ +   P+V+TY  LI   C     
Sbjct: 381 LSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRL 440

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA+ +  EM  +G+  + V +N ++  LCK+ K+ +A  +   M  +  +P+ FT+++L
Sbjct: 441 EEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSL 500

Query: 128 MDGFCLTGKINRAEELFGSMESM---GCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + G C   K+N+ EE  G  + M   G   + ++YN LI+ + +   ++EAL L  +M+ 
Sbjct: 501 IFGLC---KVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 557

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           +G     +TYN L   L     +E  L LFE+M    +  +  + N  I+GLC+ G I  
Sbjct: 558 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 617

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A+E  R +       DI  YN LI+GLCK+GR + AL LF  L    +  D +TYN +I 
Sbjct: 618 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 677

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
             C +G  D AH L     ++   PN + +  L+  F++
Sbjct: 678 WHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 716



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/346 (34%), Positives = 175/346 (50%), Gaps = 5/346 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P   T+  ++  LC    VD A AL   M      P+ + Y +LIH L      NE  +
Sbjct: 214 SPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLK 273

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+  G  P V TFN  +  LCK  ++ EA++L+D M+ R   PN+FTY  LM G C
Sbjct: 274 LLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLC 333

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE-MVSKGIKPTV 191
             GK++ A  L   + +     + V +N LINGY     ++EA ++  E M+S G  P +
Sbjct: 334 RMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDI 389

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYNTL LGL +   +  A +L  EMQ      +  TY   ID  CK G + EA  +   
Sbjct: 390 FTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDE 449

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +      L+   YNCLI  LCK  +++ AL +F  +  +    D+ T+N +I GLC   +
Sbjct: 450 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 509

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            ++A  L+ DM    V  N I + TLIH F+R     + ++L++ M
Sbjct: 510 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 555



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 166/363 (45%), Gaps = 33/363 (9%)

Query: 28  KEGFVDKAKALFLQMKG-ENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           + G   +A  L L M+G  +  P   +YN ++  L   N       +F+EM+ +G+ P+V
Sbjct: 158 RAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTV 217

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
            TF V+M  LC   ++D A  LL  M +    PNA  Y TL+      G++N   +L   
Sbjct: 218 YTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEE 277

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M  MGC  D  ++N  I+G CK   + EA  L   M+ +G  P   TY  L  GL  + +
Sbjct: 278 MLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGK 337

Query: 207 VEHALKLFEEMQRDDV--------------------------------AADTSTYNTFID 234
           V+ A  L  ++   +V                                  D  TYNT I 
Sbjct: 338 VDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLIL 397

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
           GLCK GY+V A EL   + I  CE ++  Y  LID  CK GRLE A  +   +  + L  
Sbjct: 398 GLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL 457

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           + V YN +I  LC D ++  A ++F DM      P++  F +LI G  ++NK  + + L 
Sbjct: 458 NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY 517

Query: 355 HKM 357
             M
Sbjct: 518 QDM 520



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 76/156 (48%), Gaps = 1/156 (0%)

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL-GILKCELDIQAYNCLIDGL 271
           L  +M+++ +    S +   +    + G   +A  L   + G+  CE   ++YN ++D L
Sbjct: 133 LLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVL 192

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
                 ++   +F  +  + +   V T+ +++  LC   ++D A  L  DM  +   PN 
Sbjct: 193 LAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNA 252

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           I++ TLIH   ++ + ++V++LL +M     +PD +
Sbjct: 253 IVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVN 288



 Score = 38.1 bits (87), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 22/106 (20%), Positives = 49/106 (46%)

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           +  +  ++  LC    ++ A  L + + R   V + + Y  +IH L   G++++   L  
Sbjct: 217 VYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLE 276

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +M      P+V  F   IHG  ++ +  +  +L+ +M  +   P++
Sbjct: 277 EMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNS 322


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 205/364 (56%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +T++T+I   C+ G +D A   F  M    + PD   Y+ LI G C+  D  +AK L
Sbjct: 432 PDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKEL 491

Query: 74  FFEMMDQGVQPSVVTF-NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             +M+ +G+ P  + F   I++ LCK G++ E   ++DL++    RPN  T+++L+DG+C
Sbjct: 492 ISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYC 551

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G +  A  L  SMES+G + D  +YN L++GYCK+  +++AL+L+R+M+ K +  T V
Sbjct: 552 LVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSV 611

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YN +  GLF+  +   A ++F EM    +A    TY T + GLC+N    EA  L   L
Sbjct: 612 SYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL 671

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  + DI  +N +I  + K GR + A ELF ++    LV  ++TY +MI  L  +   
Sbjct: 672 FSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESF 731

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A +LF  ME+++  P+  I   +I   +   + +K    L K+ +K ++P+A+  S++
Sbjct: 732 EDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLL 791

Query: 373 VDLL 376
           + L 
Sbjct: 792 IYLF 795



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 188/386 (48%), Gaps = 36/386 (9%)

Query: 8   IGVVCKPNTVTYNTIIDG-----------------------------------LCKEGFV 32
           +G   +PN +TYN +I G                                   LCK G +
Sbjct: 286 VGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRI 345

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
            +A+ +F  M  +   PDV++Y +L+HG   A        LF  M+ +GV P    FN +
Sbjct: 346 KEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTL 405

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           ++   + G MD++  + + M ++ V P+  T+ST++  FC  G+++ A E F  M   G 
Sbjct: 406 INAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGV 465

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL-GLFEIHQVEHAL 211
             D   Y+ LI G C  +++ +A  L  +M+SKGI P  + + T  +  L +  +V    
Sbjct: 466 PPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGK 525

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            + + +       +  T+N+ +DG C  G + EAV L  ++  +  E DI  YN L+DG 
Sbjct: 526 DVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGY 585

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           CK GR++ AL LFR +  + +    V+YNI++HGL    +   A ++F +M E+ +A ++
Sbjct: 586 CKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSI 645

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKM 357
             + T++ G  R N   +   LL K+
Sbjct: 646 HTYATVLGGLCRNNCTDEANMLLEKL 671



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 163/325 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TYN +I+   +    D    +F ++    + PDV +YN+LI G     + ++A  L
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 246

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F++M +QG+ P+VVT++ +++ LCK  +MD+A R+L  MV   VRPN  TY+ L+ G+  
Sbjct: 247 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 306

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G    +  +F  M S     D  + N  +   CK+  ++EA  ++  MV KG KP V++
Sbjct: 307 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 366

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G      +     LF  M  + V  D   +NT I+   + G + +++ +F  + 
Sbjct: 367 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 426

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 DI  ++ +I   C+ GRL+ A+E F  +    +  D   Y+ +I G CN   + 
Sbjct: 427 KQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLV 486

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLI 338
           KA +L  DM    + P  I F T I
Sbjct: 487 KAKELISDMLSKGIPPPCIKFFTSI 511



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 165/304 (54%), Gaps = 4/304 (1%)

Query: 74  FFEMMDQ----GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
            F+ MD+       P++ T+N++++   +  + D    +   +++  + P+ F+Y+ L+D
Sbjct: 173 LFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALID 232

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GF   G++++A +LF  ME  G   + V+Y+ LING CK KE+++A  + R+MV  G++P
Sbjct: 233 GFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRP 292

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             +TYN L  G       + ++++F+EM    +  D    N+F+  LCK+G I EA ++F
Sbjct: 293 NNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIF 352

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
            ++ +   + D+ +Y  L+ G   +G +     LF  +    +V D   +N +I+     
Sbjct: 353 DSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARL 412

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G MDK+  +F DM +  V P++I F T+I  F R+ +    +E  + M +  V PD ++ 
Sbjct: 413 GMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVY 472

Query: 370 SMVV 373
           S ++
Sbjct: 473 SCLI 476



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 160/319 (50%), Gaps = 6/319 (1%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P + TYN LI+    A   +    +F  ++  G+ P V ++N ++D   K G++D+A  L
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 246

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
              M ++ + PN  TYS+L++G C T ++++AE +   M   G + ++++YN LI+GY  
Sbjct: 247 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 306

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
           +   +E++ +++EM S  + P V   N+    L +  +++ A  +F+ M       D  +
Sbjct: 307 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 366

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCE---LDIQAYNCLIDGLCKSGRLEIALELFR 285
           Y   + G    G I     LF    ++ CE    D   +N LI+   + G ++ +L +F 
Sbjct: 367 YGALLHGYATAGCIAGMDNLF---NVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFE 423

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            + ++ +  D++T++ +I   C  G++D A + F  M +  V P+  ++  LI G     
Sbjct: 424 DMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRR 483

Query: 346 KPSKVIELLHKMKEKKVMP 364
              K  EL+  M  K + P
Sbjct: 484 DLVKAKELISDMLSKGIPP 502



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 131/259 (50%)

Query: 116 DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
           +  P  +TY+ L++ +    + +    +FG +   G   D  SYN LI+G+ K  EV++A
Sbjct: 184 EAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKA 243

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
             L+ +M  +GI P VVTY++L  GL +  +++ A ++  +M    V  +  TYN  I G
Sbjct: 244 HDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHG 303

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
              +G   E+V +F+ +       D+   N  +  LCK GR++ A ++F S+  +    D
Sbjct: 304 YSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPD 363

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           V++Y  ++HG    G +    +LF  M    V P+  +F TLI+ + R+    K + +  
Sbjct: 364 VISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFE 423

Query: 356 KMKEKKVMPDASIVSMVVD 374
            M ++ V PD    S V+ 
Sbjct: 424 DMTKQGVNPDIITFSTVIS 442



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 134/283 (47%), Gaps = 11/283 (3%)

Query: 103 DEASRLLD-LMVQRDVRPNAFTYSTLMDGFCLTGKINR-------AEELFGSMESMGCKH 154
           D+A  L D L+++RD    A   + L+                  A ELF  M+   C  
Sbjct: 125 DDARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACPE 184

Query: 155 DD---VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
                 +YNILIN Y + +  +  L ++  ++  G+ P V +YN L  G  +  +V+ A 
Sbjct: 185 AAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAH 244

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            LF +M+   +  +  TY++ I+GLCK   + +A  + R +       +   YNCLI G 
Sbjct: 245 DLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGY 304

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
             SG  + ++ +F+ +   +LV DV   N  +  LC  G++ +A D+F  M      P+V
Sbjct: 305 STSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDV 364

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           I +  L+HG+      + +  L + M  + V+PD  + + +++
Sbjct: 365 ISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLIN 407



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 78/164 (47%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY T++ GLC+    D+A  L  ++   N+  D++T+N +I  +       EAK LF  +
Sbjct: 647 TYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAI 706

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
              G+ P+++T+ V++  L K    ++A  L   M +    P++   + ++      G++
Sbjct: 707 STYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEV 766

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 181
            +A      ++  G   +  + ++LI  +  N +  E + L  E
Sbjct: 767 AKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 810


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 134/367 (36%), Positives = 196/367 (53%), Gaps = 3/367 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNTVTYNT+I  LCKE  V++A  L   +  + I PDV T+NSLI GLC   +   A 
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM  +G +P   T+N+++D LC  GK+DEA  +L  M       +  TY+TL+DGF
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K   AEE+F  ME  G   + V+YN LI+G CK++ VE+A  L  +M+ +G KP  
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN+L         ++ A  + + M  +    D  TY T I GLCK G +  A +L R+
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS-LPRRVLVADVVTYNIMIHGLCN-D 309
           + +    L   AYN +I GL +  +   A+ LFR  L +     D V+Y I+  GLCN  
Sbjct: 601 IQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G + +A D  +++ E    P       L  G + ++    +++L++ + +K    +   V
Sbjct: 661 GPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEE-V 719

Query: 370 SMVVDLL 376
           SMV  LL
Sbjct: 720 SMVKGLL 726



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 202/360 (56%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+NT+++GLCK G V  A  +   M  E  +PDV TYNS+I GLC   +  EA  +
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+ +   P+ VT+N ++  LCK  +++EA+ L  ++  + + P+  T+++L+ G CL
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           T     A ELF  M S GC+ D+ +YN+LI+  C   +++EAL++ ++M   G   +V+T
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G  + ++   A ++F+EM+   V+ ++ TYNT IDGLCK+  + +A +L   + 
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   + D   YN L+   C+ G ++ A ++ +++       D+VTY  +I GLC  G+++
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L   ++   +      +  +I G  R  K ++ I L  +M E+   P  ++   +V
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/352 (34%), Positives = 180/352 (51%), Gaps = 1/352 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN-INPDVVTYNSLIHGLCHANDWNEA 70
           C  + V+ N I+ G CKEG V+ A     +M  ++   PD  T+N+L++GLC A     A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             +   M+ +G  P V T+N ++  LCK G++ EA  +LD M+ RD  PN  TY+TL+  
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C   ++  A EL   + S G   D  ++N LI G C  +    A+ L+ EM SKG +P 
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             TYN L   L    +++ AL + ++M+    A    TYNT IDG CK     EA E+F 
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            + +     +   YN LIDGLCKS R+E A +L   +       D  TYN ++   C  G
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG 554

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
            + KA D+   M  N   P+++ + TLI G  +  +     +LL  ++ K +
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 179/353 (50%), Gaps = 1/353 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+ T++ G  +EG +D A  +  QM     +   V+ N ++HG C      +A   
Sbjct: 222 PDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNF 281

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             EM +Q G  P   TFN +++ LCK G +  A  ++D+M+Q    P+ +TY++++ G C
Sbjct: 282 IQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC 341

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A E+   M +  C  + V+YN LI+  CK  +VEEA  L R + SKGI P V 
Sbjct: 342 KLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 401

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N+L  GL        A++LFEEM+      D  TYN  ID LC  G + EA+ + + +
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +  C   +  YN LIDG CK+ +   A E+F  +    +  + VTYN +I GLC   ++
Sbjct: 462 ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + A  L   M      P+   + +L+  F R     K  +++  M      PD
Sbjct: 522 EDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 192/368 (52%), Gaps = 7/368 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+T  YN +++ L     +   +    +M    I PDV T+N LI  LC A+    A  
Sbjct: 151 KPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAIL 210

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M   G+ P   TF  +M    + G +D A R+ + MV+     +  + + ++ GFC
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270

Query: 133 LTGKINRAEELFGSMESM-GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
             G++  A      M +  G   D  ++N L+NG CK   V+ A+ +   M+ +G  P V
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN++  GL ++ +V+ A+++ ++M   D + +T TYNT I  LCK   + EA EL R 
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390

Query: 252 L---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           L   GIL    D+  +N LI GLC +    +A+ELF  +  +    D  TYN++I  LC+
Sbjct: 391 LTSKGILP---DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G++D+A ++   ME +  A +VI + TLI GF + NK  +  E+  +M+   V  ++  
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT 507

Query: 369 VSMVVDLL 376
            + ++D L
Sbjct: 508 YNTLIDGL 515



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 169/365 (46%), Gaps = 2/365 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    Y  I+  L + G  D  K +   MK         T+  LI         +E   +
Sbjct: 81  PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              M+D+ G++P    +N +++ L     +         M    ++P+  T++ L+   C
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++  A  +   M S G   D+ ++  ++ GY +  +++ AL +  +MV  G   + V
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQ-RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           + N +  G  +  +VE AL   +EM  +D    D  T+NT ++GLCK G++  A+E+   
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D+  YN +I GLCK G ++ A+E+   +  R    + VTYN +I  LC + Q
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A +L   +    + P+V  F +LI G          +EL  +M+ K   PD    +M
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440

Query: 372 VVDLL 376
           ++D L
Sbjct: 441 LIDSL 445


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 205/364 (56%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +T++T+I   C+ G +D A   F  M    + PD   Y+ LI G C+  D  +AK L
Sbjct: 361 PDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKEL 420

Query: 74  FFEMMDQGVQPSVVTF-NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             +M+ +G+ P  + F   I++ LCK G++ E   ++DL++    RPN  T+++L+DG+C
Sbjct: 421 ISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYC 480

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G +  A  L  SMES+G + D  +YN L++GYCK+  +++AL+L+R+M+ K +  T V
Sbjct: 481 LVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSV 540

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YN +  GLF+  +   A ++F EM    +A    TY T + GLC+N    EA  L   L
Sbjct: 541 SYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL 600

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  + DI  +N +I  + K GR + A ELF ++    LV  ++TY +MI  L  +   
Sbjct: 601 FSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESF 660

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A +LF  ME+++  P+  I   +I   +   + +K    L K+ +K ++P+A+  S++
Sbjct: 661 EDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLL 720

Query: 373 VDLL 376
           + L 
Sbjct: 721 IYLF 724



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 188/386 (48%), Gaps = 36/386 (9%)

Query: 8   IGVVCKPNTVTYNTIIDG-----------------------------------LCKEGFV 32
           +G   +PN +TYN +I G                                   LCK G +
Sbjct: 215 VGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRI 274

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
            +A+ +F  M  +   PDV++Y +L+HG   A        LF  M+ +GV P    FN +
Sbjct: 275 KEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTL 334

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           ++   + G MD++  + + M ++ V P+  T+ST++  FC  G+++ A E F  M   G 
Sbjct: 335 INAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGV 394

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL-GLFEIHQVEHAL 211
             D   Y+ LI G C  +++ +A  L  +M+SKGI P  + + T  +  L +  +V    
Sbjct: 395 PPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGK 454

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            + + +       +  T+N+ +DG C  G + EAV L  ++  +  E DI  YN L+DG 
Sbjct: 455 DVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGY 514

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           CK GR++ AL LFR +  + +    V+YNI++HGL    +   A ++F +M E+ +A ++
Sbjct: 515 CKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSI 574

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKM 357
             + T++ G  R N   +   LL K+
Sbjct: 575 HTYATVLGGLCRNNCTDEANMLLEKL 600



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 163/325 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TYN +I+   +    D    +F ++    + PDV +YN+LI G     + ++A  L
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 175

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F++M +QG+ P+VVT++ +++ LCK  +MD+A R+L  MV   VRPN  TY+ L+ G+  
Sbjct: 176 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 235

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G    +  +F  M S     D  + N  +   CK+  ++EA  ++  MV KG KP V++
Sbjct: 236 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 295

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G      +     LF  M  + V  D   +NT I+   + G + +++ +F  + 
Sbjct: 296 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 355

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 DI  ++ +I   C+ GRL+ A+E F  +    +  D   Y+ +I G CN   + 
Sbjct: 356 KQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLV 415

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLI 338
           KA +L  DM    + P  I F T I
Sbjct: 416 KAKELISDMLSKGIPPPCIKFFTSI 440



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 165/304 (54%), Gaps = 4/304 (1%)

Query: 74  FFEMMDQ----GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
            F+ MD+       P++ T+N++++   +  + D    +   +++  + P+ F+Y+ L+D
Sbjct: 102 LFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALID 161

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GF   G++++A +LF  ME  G   + V+Y+ LING CK KE+++A  + R+MV  G++P
Sbjct: 162 GFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRP 221

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             +TYN L  G       + ++++F+EM    +  D    N+F+  LCK+G I EA ++F
Sbjct: 222 NNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIF 281

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
            ++ +   + D+ +Y  L+ G   +G +     LF  +    +V D   +N +I+     
Sbjct: 282 DSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARL 341

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G MDK+  +F DM +  V P++I F T+I  F R+ +    +E  + M +  V PD ++ 
Sbjct: 342 GMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVY 401

Query: 370 SMVV 373
           S ++
Sbjct: 402 SCLI 405



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 160/319 (50%), Gaps = 6/319 (1%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P + TYN LI+    A   +    +F  ++  G+ P V ++N ++D   K G++D+A  L
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 175

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
              M ++ + PN  TYS+L++G C T ++++AE +   M   G + ++++YN LI+GY  
Sbjct: 176 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 235

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
           +   +E++ +++EM S  + P V   N+    L +  +++ A  +F+ M       D  +
Sbjct: 236 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 295

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCE---LDIQAYNCLIDGLCKSGRLEIALELFR 285
           Y   + G    G I     LF    ++ CE    D   +N LI+   + G ++ +L +F 
Sbjct: 296 YGALLHGYATAGCIAGMDNLF---NVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFE 352

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            + ++ +  D++T++ +I   C  G++D A + F  M +  V P+  ++  LI G     
Sbjct: 353 DMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRR 412

Query: 346 KPSKVIELLHKMKEKKVMP 364
              K  EL+  M  K + P
Sbjct: 413 DLVKAKELISDMLSKGIPP 431



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 134/283 (47%), Gaps = 11/283 (3%)

Query: 103 DEASRLLD-LMVQRDVRPNAFTYSTLMDGFCLTGKINR-------AEELFGSMESMGCKH 154
           D+A  L D L+++RD    A   + L+                  A ELF  M+   C  
Sbjct: 54  DDARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACPE 113

Query: 155 DD---VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
                 +YNILIN Y + +  +  L ++  ++  G+ P V +YN L  G  +  +V+ A 
Sbjct: 114 AAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAH 173

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            LF +M+   +  +  TY++ I+GLCK   + +A  + R +       +   YNCLI G 
Sbjct: 174 DLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGY 233

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
             SG  + ++ +F+ +   +LV DV   N  +  LC  G++ +A D+F  M      P+V
Sbjct: 234 STSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDV 293

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           I +  L+HG+      + +  L + M  + V+PD  + + +++
Sbjct: 294 ISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLIN 336



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 78/164 (47%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY T++ GLC+    D+A  L  ++   N+  D++T+N +I  +       EAK LF  +
Sbjct: 576 TYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAI 635

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
              G+ P+++T+ V++  L K    ++A  L   M +    P++   + ++      G++
Sbjct: 636 STYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEV 695

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 181
            +A      ++  G   +  + ++LI  +  N +  E + L  E
Sbjct: 696 AKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 739


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 120/362 (33%), Positives = 201/362 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ ++Y+T+I+G C+ G + +   L  +M+ + + P+  TYN +I  LC      EA+
Sbjct: 284 CIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAE 343

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R+  EM+ +G+ P  V +  ++D  CK G +  A RL D M +R + P+  TY+ ++ G 
Sbjct: 344 RVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGL 403

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C TG++  A++LF  M     + D+V+Y  LI+GYCK  +++EA SL+ +M+  G+ P +
Sbjct: 404 CQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNI 463

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY  L  GL +  +V+ A +L  EM R  +  +  TYN+ ++GLCK G I +AV+L + 
Sbjct: 464 VTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKD 523

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +     D   Y  L+D  CKS  +  A EL R +  R L   VVT+N++++G C  G 
Sbjct: 524 MEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGM 583

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           ++    L   M E  + PN   + +LI  +   N      E+   M  K V+PD +  ++
Sbjct: 584 LEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNI 643

Query: 372 VV 373
           ++
Sbjct: 644 LI 645



 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 198/367 (53%), Gaps = 2/367 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+GV    NT +YN I   LC+ G V +A  L LQM+     PDV++Y+++I+G C   +
Sbjct: 246 EVGVCW--NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGE 303

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
                +L  EM  +G++P+  T+N ++  LCK GK+ EA R+L  M+   + P+   Y+T
Sbjct: 304 LQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTT 363

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+DGFC  G ++ A  LF  M+      D ++Y  +I G C+   V EA  L+ EMV K 
Sbjct: 364 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 423

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           ++P  VTY  L  G  +  +++ A  L  +M +  +  +  TY    DGLCK G +  A 
Sbjct: 424 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 483

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           EL   +     EL+I  YN L++GLCK+G ++ A++L + +       D VTY  ++   
Sbjct: 484 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 543

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C   +M +AH+L   M +  + P V+ F  L++GF          +LL  M EK +MP+A
Sbjct: 544 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 603

Query: 367 SIVSMVV 373
           +  + ++
Sbjct: 604 TTYNSLI 610



 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 189/365 (51%), Gaps = 6/365 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V Y T+IDG CK G V  A  LF +M+   I+PD +TY ++I GLC      EA +L
Sbjct: 356 PDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKL 415

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+ + ++P  VT+  ++D  CK GKM EA  L + M+Q  + PN  TY+ L DG C 
Sbjct: 416 FHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK 475

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A EL   M   G + +  +YN L+NG CK   +++A+ L ++M   G  P  VT
Sbjct: 476 CGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVT 535

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           Y TL     +  ++  A +L  +M   ++     T+N  ++G C +G + +  +L + + 
Sbjct: 536 YTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWML 595

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             GI+    +   YN LI   C    +    E++R +  + +V D  TYNI+I G C   
Sbjct: 596 EKGIMP---NATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKAR 652

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            M +A  L  DM        V  +  LI GF +  K  +  EL  +M+ + ++ D  I +
Sbjct: 653 NMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYN 712

Query: 371 MVVDL 375
           +  D+
Sbjct: 713 IFADI 717



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 173/330 (52%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
           A  +F++     +  +  +YN + H LC      EA +L  +M  +G  P V++++ +++
Sbjct: 237 ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVIN 296

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
             C+ G++    +L++ M  + ++PN +TY+ ++   C TGK+  AE +   M S G   
Sbjct: 297 GYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAP 356

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D V Y  LI+G+CK   V  A  L+ EM  + I P  +TY  +  GL +  +V  A KLF
Sbjct: 357 DGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLF 416

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
            EM    +  D  TY   IDG CK G + EA  L   +  +    +I  Y  L DGLCK 
Sbjct: 417 HEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKC 476

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G ++ A EL   + R+ L  ++ TYN +++GLC  G +D+A  L  DME     P+ + +
Sbjct: 477 GEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTY 536

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            TL+  + +  +  +  ELL +M ++++ P
Sbjct: 537 TTLMDAYCKSREMVRAHELLRQMLDRELQP 566



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 191/357 (53%), Gaps = 1/357 (0%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE-AKRLFFEM 77
           ++     L + G +D+A+ LF +M    +   V + N  I  L    D  + A ++F E 
Sbjct: 185 FDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEF 244

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
            + GV  +  ++N+I   LC+ G++ EA +LL  M  R   P+  +YST+++G+C  G++
Sbjct: 245 PEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGEL 304

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
            R  +L   M+  G K +  +YN +I   CK  +V EA  + REM+S+GI P  V Y TL
Sbjct: 305 QRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 364

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G  ++  V  A +LF+EMQ+  ++ D  TY   I GLC+ G ++EA +LF  +   + 
Sbjct: 365 IDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 424

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           E D   Y  LIDG CK G+++ A  L   + +  L  ++VTY  +  GLC  G++D A++
Sbjct: 425 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 484

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           L  +M    +  N+  + +L++G  +     + ++L+  M+     PDA   + ++D
Sbjct: 485 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMD 541



 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/307 (34%), Positives = 166/307 (54%), Gaps = 3/307 (0%)

Query: 10  VVCK---PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           +VCK   P+ VTY  +IDG CKEG + +A +L  QM    + P++VTY +L  GLC   +
Sbjct: 419 MVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGE 478

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            + A  L  EM  +G++ ++ T+N +++ LCK G +D+A +L+  M      P+A TY+T
Sbjct: 479 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 538

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           LMD +C + ++ RA EL   M     +   V++N+L+NG+C +  +E+   L + M+ KG
Sbjct: 539 LMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 598

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I P   TYN+L       + +    +++  M    V  D +TYN  I G CK   + EA 
Sbjct: 599 IMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW 658

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            L R +      L + +YN LI G  K  +   A ELF  + R  LVAD   YNI     
Sbjct: 659 FLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADIN 718

Query: 307 CNDGQMD 313
            ++G+M+
Sbjct: 719 YDEGKME 725



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/287 (34%), Positives = 146/287 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  + DGLCK G VD A  L  +M  + +  ++ TYNSL++GLC A + ++A +L
Sbjct: 461 PNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKL 520

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   G  P  VT+  +MD  CK+ +M  A  LL  M+ R+++P   T++ LM+GFC+
Sbjct: 521 MKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCM 580

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G +   E+L   M   G   +  +YN LI  YC    +     +YR M +KG+ P   T
Sbjct: 581 SGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNT 640

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +   ++ A  L  +M         S+YN  I G  K    +EA ELF  + 
Sbjct: 641 YNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMR 700

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
                 D + YN   D     G++E+ LEL      + LV D+ T N
Sbjct: 701 REGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 747



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 105/218 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY T++D  CK   + +A  L  QM    + P VVT+N L++G C +    + ++L
Sbjct: 531 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 590

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+++G+ P+  T+N ++ + C    M   + +   M  + V P+  TY+ L+ G C 
Sbjct: 591 LKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCK 650

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +  A  L   M   G      SYN LI G+ K K+  EA  L+ +M  +G+      
Sbjct: 651 ARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREI 710

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           YN      ++  ++E  L+L +E     +  D  T NT
Sbjct: 711 YNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 748



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 84/184 (45%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VT+N +++G C  G ++  + L   M  + I P+  TYNSLI   C  N+      
Sbjct: 565 QPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTE 624

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++  M  +GV P   T+N+++   CK   M EA  L   MV +       +Y+ L+ GF 
Sbjct: 625 IYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFY 684

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K   A ELF  M   G   D   YNI  +      ++E  L L  E + K +   + 
Sbjct: 685 KRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQ 744

Query: 193 TYNT 196
           T NT
Sbjct: 745 TKNT 748



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 108/238 (45%), Gaps = 41/238 (17%)

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM-------------- 217
           VE+ +  Y++    G  P V  ++  F  L E   ++ A KLF++M              
Sbjct: 168 VEQLIYTYKDW---GSDPRV--FDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNL 222

Query: 218 ----------------------QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
                                     V  +T++YN     LC+ G +VEA +L   + + 
Sbjct: 223 FISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELR 282

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
            C  D+ +Y+ +I+G C+ G L+  L+L   +  + L  +  TYN +I  LC  G++ +A
Sbjct: 283 GCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEA 342

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
             +  +M    +AP+ +I+ TLI GF ++   S    L  +M+++K+ PD    + V+
Sbjct: 343 ERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVI 400



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 87/163 (53%), Gaps = 13/163 (7%)

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GIL----KCELDIQAYNCLIDGLCK 273
           D  +D   ++ F   L + G + EA +LF  +   G+L     C L I   +  +DG+  
Sbjct: 177 DWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGI-- 234

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
               +IAL++F   P   +  +  +YNI+ H LC  G++ +AH L L ME     P+VI 
Sbjct: 235 ----KIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVIS 290

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + T+I+G+ ++ +  +V++L+ +M+ K + P+    + V+ LL
Sbjct: 291 YSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLL 333


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 124/355 (34%), Positives = 193/355 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTYNT+I G C  G V+ A+ +   MK   + PD  TY SLI G+C      EA  
Sbjct: 268 KPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASG 327

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M + G+ P+ VT+N ++D  C  G + +A    D MV+R + P   TY+ L+    
Sbjct: 328 ILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALF 387

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK++ A+ +   M   G   D ++YNILINGYC+    ++A +L+ EM+SKGI+PT+V
Sbjct: 388 LEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLV 447

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY +L   L + ++++ A  LFE++ R+  + D   +N  IDG C NG +  A  L + +
Sbjct: 448 TYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEM 507

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D   YN L+ G C+ G++E A EL + + RR +  D ++YN +I G    G +
Sbjct: 508 DKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDI 567

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           + A  +  +M      P ++ +  LI G  +  +     ELL +M  K + PD S
Sbjct: 568 NDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDS 622



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 186/359 (51%), Gaps = 2/359 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E GVV  P   T+N ++    K    +    L+ +M    I   V T+N +I+ LC    
Sbjct: 194 EKGVV--PKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGK 251

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +AK     M + GV+P+VVT+N ++   C  G+++ A  +LD+M  R V P+++TY +
Sbjct: 252 LKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGS 311

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ G C  GK+  A  +   M+ +G     V+YN LI+GYC   ++ +A     EMV + 
Sbjct: 312 LISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRA 371

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I PTV TYN L   LF   +++ A  + ++M    +  D+ TYN  I+G C+ G   +A 
Sbjct: 372 ILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAF 431

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            L   +     +  +  Y  LI  L K  R++ A +LF  + R     D++ +N +I G 
Sbjct: 432 NLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGH 491

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           C +G +D+A  L  +M++  + P+ + + TL+ G  R  K  +  ELL +MK + + PD
Sbjct: 492 CANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPD 550



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 168/311 (54%), Gaps = 5/311 (1%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           EIG++  P  VTYNT+IDG C +G + KA     +M    I P V TYN LIH L     
Sbjct: 334 EIGLL--PTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGK 391

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            +EA  +  +M D G+ P  +T+N++++  C+ G   +A  L D M+ + ++P   TY++
Sbjct: 392 MDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTS 451

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+       ++  A++LF  +   G   D + +N LI+G+C N  ++ A +L +EM  + 
Sbjct: 452 LIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRN 511

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I P  VTYNTL  G     +VE A +L +EM+R  +  D  +YNT I G  K G I +A 
Sbjct: 512 IVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAF 571

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            +   +  +     +  YN LI GLCK+ + ++A EL + +  + +  D  TY  +I G+
Sbjct: 572 TIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGI 631

Query: 307 CNDGQMDKAHD 317
              G++D + +
Sbjct: 632 ---GKVDDSSE 639



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 91/233 (39%), Positives = 138/233 (59%), Gaps = 2/233 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G+ G+V  P+++TYN +I+G C+ G   KA  L  +M  + I P +VTY SLI+ L   N
Sbjct: 403 GDSGIV--PDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRN 460

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
               A  LF +++ +G  P ++ FN ++D  C NG +D A  LL  M +R++ P+  TY+
Sbjct: 461 RMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYN 520

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TLM G C  GK+  A EL   M+  G + D +SYN LI+GY K  ++ +A ++  EM+S 
Sbjct: 521 TLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSI 580

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
           G  PT++TYN L  GL +  Q + A +L +EM    +  D STY + I+G+ K
Sbjct: 581 GFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGK 633



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 116/235 (49%), Gaps = 1/235 (0%)

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
           EL  + + +G K   + +++LI   C+ K  ++A   +  M  KG+ P + T+N +    
Sbjct: 153 ELAITRDRLGTK-SSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLF 211

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
            +++Q E    L+ EM R  + +   T+N  I+ LCK G + +A +   ++  L  + ++
Sbjct: 212 LKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNV 271

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
             YN +I G C  GR+E A  +   +  R +  D  TY  +I G+C  G++++A  +   
Sbjct: 272 VTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEK 331

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           M+E  + P  + + TLI G+       K      +M  + ++P  S  ++++  L
Sbjct: 332 MKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHAL 386



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 130/297 (43%), Gaps = 42/297 (14%)

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           G + S+V F++++   C+  + D+A    D+M ++ V P   T++ ++  F    K+N+ 
Sbjct: 162 GTKSSIV-FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFL---KLNQT 217

Query: 141 EE---LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           E    L+  M  +  K    ++NI+IN  CK  ++++A      M + G+KP VVTY   
Sbjct: 218 ETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTY--- 274

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
                                           NT I G C  G +  A  +   +     
Sbjct: 275 --------------------------------NTVIHGYCSRGRVEGARMVLDIMKNRGV 302

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           E D   Y  LI G+CK G+LE A  +   +    L+   VTYN +I G CN G + KA  
Sbjct: 303 EPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFG 362

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
              +M   A+ P V  +  LIH      K  +   ++  M +  ++PD+   +++++
Sbjct: 363 YRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILIN 419



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 3/98 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ ++YNT+I G  K G ++ A  +  +M     NP ++TYN+LI GLC     + A+ 
Sbjct: 548 RPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEE 607

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD 110
           L  EM+ +G+ P   T+  +++ +   GK+D++S   D
Sbjct: 608 LLKEMVSKGITPDDSTYFSLIEGI---GKVDDSSEASD 642


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  231 bits (590), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 122/354 (34%), Positives = 198/354 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N V+Y  +I GLC+ G +++A  LF  M  +N  P V TY  LI+ L  +    EA 
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM ++G +P+V T+ V++D LCK  KMDEA ++L  M ++ + P+  TY+ L+DG+
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I+ A E+   MES  C  +  +YN LI G CK ++V +A++L  +M+ + + P++
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYN+L  G  +++ +E A +L   M  + +  D  TY+ FID LCK G + EA  LF +
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + +   Y  LIDG CK G++++A  L   +     + +  TYN++I GLC + +
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           M +A  L   M    V P V+ +  LI   ++       +++ + M      PD
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPD 613



 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/395 (32%), Positives = 195/395 (49%), Gaps = 35/395 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNT TYN +I GLCK+  V KA AL  +M    ++P ++TYNSLIHG C  ND   A 
Sbjct: 400 CGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAY 459

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL   M + G+ P   T++V +D LCK G+++EA  L D +  + V+ N   Y+ L+DG+
Sbjct: 460 RLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGY 519

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GKI+ A  L   M +  C  +  +YN+LI G CK K+++EA SL  +M++ G+KPTV
Sbjct: 520 CKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTV 579

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY  L   + +    +HALK+F  M       D  TY  F+      G + E  ++   
Sbjct: 580 VTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAK 639

Query: 252 L---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           +   GIL    D+  Y  LIDG  + G    A +  + +        +   +I+I  L +
Sbjct: 640 MNEEGILP---DLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSH 696

Query: 309 DGQMDK-----------------------------AHDLFLDMEENAVAPNVIIFVTLIH 339
           + +M +                             A  LF  M E+    +V I+  LI 
Sbjct: 697 ENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIA 756

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           GF +  +  +   L+H MKE+ + P   I + ++D
Sbjct: 757 GFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 791



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 184/362 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN  TY  +IDGLCKE  +D+A+ +  +M  + + P VVTYN+LI G C     ++A 
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAF 389

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   M      P+  T+N ++  LCK  K+ +A  LL+ M++R + P+  TY++L+ G 
Sbjct: 390 EILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQ 449

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    +  A  L   M   G   D  +Y++ I+  CK   VEEA +L+  + +KG+K   
Sbjct: 450 CKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANE 509

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V Y  L  G  ++ +++ A  L E M  D    ++ TYN  I+GLCK   + EA  L   
Sbjct: 510 VIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAK 569

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +  +  +  Y  LI  + K G  + AL++F  +       DV TY   +H   + G 
Sbjct: 570 MLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGM 629

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++  D+   M E  + P+++ +  LI G+ R+    +  + L  M +    P   IVS+
Sbjct: 630 LEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSI 689

Query: 372 VV 373
           ++
Sbjct: 690 LI 691



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 190/361 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T+N +++G CK G V +A+    ++    ++PD  TY SLI G C     + A  +
Sbjct: 192 PNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEV 251

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M  +G Q + V++  ++  LC+ G+++EA +L   M + +  P   TY+ L+     
Sbjct: 252 FLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSG 311

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G+   A  LF  M+  GC+ +  +Y +LI+G CK  +++EA  +  EM  KG+ P+VVT
Sbjct: 312 SGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVT 371

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +   ++ A ++ + M+ +    +T TYN  I GLCK   + +A+ L   + 
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML 431

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K    +  YN LI G CK   LE A  L   +    LV D  TY++ I  LC +G+++
Sbjct: 432 ERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVE 491

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  LF  ++   V  N +I+  LI G+ ++ K      LL +M     +P++   ++++
Sbjct: 492 EAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLI 551

Query: 374 D 374
           +
Sbjct: 552 E 552



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 186/372 (50%), Gaps = 2/372 (0%)

Query: 3   NGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC 62
           N +GE     KP    YNTI+  L K   +D+ K ++L++    I+P++ T+N++++G C
Sbjct: 148 NADGEFKF--KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYC 205

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
              +  EA+    +++  G+ P   T+  ++   C+N  +D A  +  +M Q+  + N  
Sbjct: 206 KIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEV 265

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           +Y+ L+ G C  G+IN A +LF  M    C     +Y +LI     +    EAL+L+ EM
Sbjct: 266 SYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEM 325

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
             KG +P V TY  L  GL + ++++ A K+  EM    +     TYN  IDG CK G I
Sbjct: 326 KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMI 385

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            +A E+   +    C  + + YN LI GLCK  ++  A+ L   +  R L   ++TYN +
Sbjct: 386 DDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSL 445

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           IHG C    ++ A+ L   M EN + P+   +   I    +  +  +   L   +K K V
Sbjct: 446 IHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGV 505

Query: 363 MPDASIVSMVVD 374
             +  I + ++D
Sbjct: 506 KANEVIYTALID 517



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 167/328 (50%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P +  YN+++  L      +E K ++ E+++  + P++ TFN +++  CK G + EA   
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
              +VQ  + P+ FTY++L+ G C    ++ A E+F  M   GC+ ++VSY  LI+G C+
Sbjct: 217 ASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCE 276

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
              + EAL L+ +M      PTV TY  L   L    +   AL LF EM+      +  T
Sbjct: 277 AGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHT 336

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           Y   IDGLCK   + EA ++   +        +  YN LIDG CK G ++ A E+   + 
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
                 +  TYN +I GLC   ++ KA  L   M E  ++P++I + +LIHG  ++N   
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLE 456

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVDLL 376
               LL  M E  ++PD    S+ +D L
Sbjct: 457 SAYRLLSLMNENGLVPDQWTYSVFIDTL 484



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 171/386 (44%), Gaps = 29/386 (7%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N V Y  +IDG CK G +D A +L  +M  +   P+  TYN LI GLC      EA  
Sbjct: 506 KANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASS 565

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+  GV+P+VVT+ +++ E+ K+G  D A ++ + MV    +P+  TY+  +  + 
Sbjct: 566 LVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYF 625

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +   +++   M   G   D V+Y +LI+GY +      A    + MV  G KP++ 
Sbjct: 626 SQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLY 685

Query: 193 TYNTLFLGL-----------------------------FEIHQVEHALKLFEEMQRDDVA 223
             + L   L                             ++  + E ALKLFE+M      
Sbjct: 686 IVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCT 745

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL 283
            D S Y   I G C+   + EA  L   +           YN L+D  CK G    A+ L
Sbjct: 746 IDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRL 805

Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
             ++    L+  + +Y +++ GL  +G  +KA  +F  +       + + +  LI G ++
Sbjct: 806 VDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLK 865

Query: 344 INKPSKVIELLHKMKEKKVMPDASIV 369
            +   +  EL+  M+EK     A I 
Sbjct: 866 RDLVDECSELIDIMEEKDATAQADIA 891


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 122/354 (34%), Positives = 198/354 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N V+Y  +I GLC+ G +++A  LF  M  +N  P V TY  LI+ L  +    EA 
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM ++G +P+V T+ V++D LCK  KMDEA ++L  M ++ + P+  TY+ L+DG+
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I+ A E+   MES  C  +  +YN LI G CK ++V +A++L  +M+ + + P++
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYN+L  G  +++ +E A +L   M  + +  D  TY+ FID LCK G + EA  LF +
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + +   Y  LIDG CK G++++A  L   +     + +  TYN++I GLC + +
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           M +A  L   M    V P V+ +  LI   ++       +++ + M      PD
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPD 613



 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 195/384 (50%), Gaps = 24/384 (6%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNT TYN +I GLCK+  V KA AL  +M    ++P ++TYNSLIHG C  ND   A 
Sbjct: 400 CGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAY 459

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL   M + G+ P   T++V +D LCK G+++EA  L D +  + V+ N   Y+ L+DG+
Sbjct: 460 RLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGY 519

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GKI+ A  L   M +  C  +  +YN+LI G CK K+++EA SL  +M++ G+KPTV
Sbjct: 520 CKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTV 579

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY  L   + +    +HALK+F  M       D  TY  F+      G + E  ++   
Sbjct: 580 VTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAK 639

Query: 252 L---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           +   GIL    D+  Y  LIDG  + G    A +  + +        +   +I+I  L +
Sbjct: 640 MNEEGILP---DLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSH 696

Query: 309 DGQMDK------------------AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
           + +M +                  A  LF  M E+    +V I+  LI GF +  +  + 
Sbjct: 697 ENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEA 756

Query: 351 IELLHKMKEKKVMPDASIVSMVVD 374
             L+H MKE+ + P   I + ++D
Sbjct: 757 QGLVHHMKERGMSPSEDIYNSLLD 780



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 184/362 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN  TY  +IDGLCKE  +D+A+ +  +M  + + P VVTYN+LI G C     ++A 
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAF 389

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   M      P+  T+N ++  LCK  K+ +A  LL+ M++R + P+  TY++L+ G 
Sbjct: 390 EILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQ 449

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    +  A  L   M   G   D  +Y++ I+  CK   VEEA +L+  + +KG+K   
Sbjct: 450 CKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANE 509

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V Y  L  G  ++ +++ A  L E M  D    ++ TYN  I+GLCK   + EA  L   
Sbjct: 510 VIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAK 569

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +  +  +  Y  LI  + K G  + AL++F  +       DV TY   +H   + G 
Sbjct: 570 MLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGM 629

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++  D+   M E  + P+++ +  LI G+ R+    +  + L  M +    P   IVS+
Sbjct: 630 LEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSI 689

Query: 372 VV 373
           ++
Sbjct: 690 LI 691



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 190/361 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T+N +++G CK G V +A+    ++    ++PD  TY SLI G C     + A  +
Sbjct: 192 PNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEV 251

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M  +G Q + V++  ++  LC+ G+++EA +L   M + +  P   TY+ L+     
Sbjct: 252 FLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSG 311

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G+   A  LF  M+  GC+ +  +Y +LI+G CK  +++EA  +  EM  KG+ P+VVT
Sbjct: 312 SGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVT 371

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +   ++ A ++ + M+ +    +T TYN  I GLCK   + +A+ L   + 
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML 431

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K    +  YN LI G CK   LE A  L   +    LV D  TY++ I  LC +G+++
Sbjct: 432 ERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVE 491

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  LF  ++   V  N +I+  LI G+ ++ K      LL +M     +P++   ++++
Sbjct: 492 EAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLI 551

Query: 374 D 374
           +
Sbjct: 552 E 552



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 186/372 (50%), Gaps = 2/372 (0%)

Query: 3   NGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC 62
           N +GE     KP    YNTI+  L K   +D+ K ++L++    I+P++ T+N++++G C
Sbjct: 148 NADGEFKF--KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYC 205

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
              +  EA+    +++  G+ P   T+  ++   C+N  +D A  +  +M Q+  + N  
Sbjct: 206 KIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEV 265

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           +Y+ L+ G C  G+IN A +LF  M    C     +Y +LI     +    EAL+L+ EM
Sbjct: 266 SYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEM 325

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
             KG +P V TY  L  GL + ++++ A K+  EM    +     TYN  IDG CK G I
Sbjct: 326 KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMI 385

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            +A E+   +    C  + + YN LI GLCK  ++  A+ L   +  R L   ++TYN +
Sbjct: 386 DDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSL 445

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           IHG C    ++ A+ L   M EN + P+   +   I    +  +  +   L   +K K V
Sbjct: 446 IHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGV 505

Query: 363 MPDASIVSMVVD 374
             +  I + ++D
Sbjct: 506 KANEVIYTALID 517



 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 167/328 (50%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P +  YN+++  L      +E K ++ E+++  + P++ TFN +++  CK G + EA   
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
              +VQ  + P+ FTY++L+ G C    ++ A E+F  M   GC+ ++VSY  LI+G C+
Sbjct: 217 ASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCE 276

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
              + EAL L+ +M      PTV TY  L   L    +   AL LF EM+      +  T
Sbjct: 277 AGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHT 336

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           Y   IDGLCK   + EA ++   +        +  YN LIDG CK G ++ A E+   + 
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
                 +  TYN +I GLC   ++ KA  L   M E  ++P++I + +LIHG  ++N   
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLE 456

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVDLL 376
               LL  M E  ++PD    S+ +D L
Sbjct: 457 SAYRLLSLMNENGLVPDQWTYSVFIDTL 484



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 177/380 (46%), Gaps = 18/380 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N V Y  +IDG CK G +D A +L  +M  +   P+  TYN LI GLC      EA  
Sbjct: 506 KANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASS 565

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+  GV+P+VVT+ +++ E+ K+G  D A ++ + MV    +P+  TY+  +  + 
Sbjct: 566 LVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYF 625

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +   +++   M   G   D V+Y +LI+GY +      A    + MV  G KP++ 
Sbjct: 626 SQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLY 685

Query: 193 TYNTLF---------------LGLFEIH---QVEHALKLFEEMQRDDVAADTSTYNTFID 234
             + L                +G+  +    + E ALKLFE+M       D S Y   I 
Sbjct: 686 IVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIA 745

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
           G C+   + EA  L   +           YN L+D  CK G    A+ L  ++    L+ 
Sbjct: 746 GFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLP 805

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
            + +Y +++ GL  +G  +KA  +F  +       + + +  LI G ++ +   +  EL+
Sbjct: 806 LLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELI 865

Query: 355 HKMKEKKVMPDASIVSMVVD 374
             M+EK   P+    S++++
Sbjct: 866 DIMEEKGCQPNPLTYSLLIE 885



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 155/389 (39%), Gaps = 94/389 (24%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
            C PN+ TYN +I+GLCKE  + +A +L  +M    + P VVTY  LI  +     ++ A
Sbjct: 539 ACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHA 598

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            ++F  M+  G QP V T+   +      G ++E   ++  M +  + P+  TY+ L+DG
Sbjct: 599 LKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDG 658

Query: 131 FCLTGKINRAEELFGSMESMGCK--------------HD--------------------- 155
           +   G  +RA +    M   GCK              H+                     
Sbjct: 659 YARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEY 718

Query: 156 -----------------DVS-YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
                            DVS Y  LI G+C+ + +EEA  L   M  +G+ P+       
Sbjct: 719 EIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPS------- 771

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GI 254
                                 +D+      YN+ +D  CK G   EAV L   +   G+
Sbjct: 772 ----------------------EDI------YNSLLDCCCKLGVYAEAVRLVDAMVENGL 803

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L     +++Y  L+ GL   G  E A  +F  L       D V + ++I GL     +D+
Sbjct: 804 LPL---LESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDE 860

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
             +L   MEE    PN + +  LI G  R
Sbjct: 861 CSELIDIMEEKGCQPNPLTYSLLIEGLER 889



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 95/201 (47%), Gaps = 13/201 (6%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M     EIG+    NT+ Y               A  LF +M       DV  Y +LI G
Sbjct: 700 MKETRSEIGIDSVSNTLEYEI-------------ALKLFEKMVEHGCTIDVSIYGALIAG 746

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
            C      EA+ L   M ++G+ PS   +N ++D  CK G   EA RL+D MV+  + P 
Sbjct: 747 FCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPL 806

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             +Y  L+ G  + G   +A+ +F  + S G  +D+V++ +LI+G  K   V+E   L  
Sbjct: 807 LESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELID 866

Query: 181 EMVSKGIKPTVVTYNTLFLGL 201
            M  KG +P  +TY+ L  GL
Sbjct: 867 IMEEKGCQPNPLTYSLLIEGL 887


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 124/352 (35%), Positives = 196/352 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+N +ID   + G VD A AL   M  + + P +VT+NS++ GLC    +++AK +
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEV 249

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M    V P V +FN+++   C+ G+++EA +    M QR V P+  ++S L+  F  
Sbjct: 250 FRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFST 309

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A      M+ +G   D V Y ++I G+C+   + EAL +  EMV  G  P VVT
Sbjct: 310 RGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVT 369

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL + H++  A +L  EM+   V  D  T+ T I G C++G   +A++LF TL 
Sbjct: 370 YNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLL 429

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +   D+ AYN LIDG+C+ G L  A EL+  +  R +  + VTY+I+I   C  GQ++
Sbjct: 430 HQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVE 489

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A     +M      PN++ + ++I G+ R     K  + L KM +  ++PD
Sbjct: 490 EAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPD 541



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 193/362 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VT+N+++ GLCK    DKAK +F  M   ++ PDV ++N LI G C   +  EA +
Sbjct: 224 KPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMK 283

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            + EM  +GV P VV+F+ ++      GKMD A+  L  M    + P+   Y+ ++ GFC
Sbjct: 284 FYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFC 343

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A  +   M  +GC  D V+YN L+NG CK   + +A  L  EM  +G+ P + 
Sbjct: 344 RAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLC 403

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+ TL  G       E AL+LF+ +    +  D   YN+ IDG+C+ G + +A EL+  +
Sbjct: 404 TFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDM 463

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   +   Y+ LID  C+ G++E A      +  +  + +++TYN +I G C  G +
Sbjct: 464 HAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNV 523

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            K       M ++ + P++I F TLIHG+++         + + M+++ V PDA   +M+
Sbjct: 524 KKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMI 583

Query: 373 VD 374
           ++
Sbjct: 584 IN 585



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 180/326 (55%), Gaps = 2/326 (0%)

Query: 50  DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
           +  T N ++H  C + ++++A  +  EM  + V P VVT NV++D   + G +D A  L+
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215

Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
           D M  + ++P   T+++++ G C   + ++A+E+F +M+      D  S+NILI G+C+ 
Sbjct: 216 DSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRV 275

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH-QVEHALKLFEEMQRDDVAADTST 228
            EVEEA+  Y+EM  +G+ P VV+++ L +GLF    +++HA     EM+   +  D   
Sbjct: 276 GEVEEAMKFYKEMQQRGVTPDVVSFSCL-IGLFSTRGKMDHAAAYLREMKGLGLVPDGVI 334

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           Y   I G C+ G + EA+ +   +  L C  D+  YN L++GLCK  RL  A EL   + 
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMK 394

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
            R +  D+ T+  +IHG C DG  +KA  LF  +    + P+V+ + +LI G  R    +
Sbjct: 395 ERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLA 454

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVD 374
           K  EL   M  +++ P+    S+++D
Sbjct: 455 KANELWDDMHAREIFPNHVTYSILID 480



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 185/352 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+++ +I      G +D A A   +MKG  + PD V Y  +I G C A   +EA R+
Sbjct: 295 PDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV 354

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+  G  P VVT+N +++ LCK  ++ +A  LL+ M +R V P+  T++TL+ G+C 
Sbjct: 355 RDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCR 414

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G   +A +LF ++     + D V+YN LI+G C+  ++ +A  L+ +M ++ I P  VT
Sbjct: 415 DGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVT 474

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L     E  QVE A    +EM       +  TYN+ I G C++G + +  +  + + 
Sbjct: 475 YSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMM 534

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+  +N LI G  K   +  A  +F  + + ++  D VTYN++I+G    G M+
Sbjct: 535 QDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNME 594

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A  +F  M  + + P+   +++LI+G V      +  +L  +M  +   PD
Sbjct: 595 EAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 178/351 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T N ++   CK    DKA  +  +M+   + PDVVT+N LI     A D + A  L 
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M ++G++P +VTFN ++  LCK+ + D+A  +   M Q  V P+  +++ L+ GFC  
Sbjct: 216 DSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRV 275

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G++  A + +  M+  G   D VS++ LI  +    +++ A +  REM   G+ P  V Y
Sbjct: 276 GEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIY 335

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             +  G      +  AL++ +EM       D  TYNT ++GLCK   +++A EL   +  
Sbjct: 336 TMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKE 395

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D+  +  LI G C+ G  E AL+LF +L  + L  DVV YN +I G+C  G + K
Sbjct: 396 RGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAK 455

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           A++L+ DM    + PN + +  LI       +  +    L +M  K  +P+
Sbjct: 456 ANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPN 506



 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 173/322 (53%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G+   P+ V Y  +I G C+ G + +A  +  +M G    PDVVTYN+L++GLC  +   
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLL 384

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A+ L  EM ++GV P + TF  ++   C++G  ++A +L D ++ + +RP+   Y++L+
Sbjct: 385 DAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLI 444

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C  G + +A EL+  M +     + V+Y+ILI+ +C+  +VEEA     EMVSKG  
Sbjct: 445 DGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNL 504

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P ++TYN++  G      V+   +  ++M +D++  D  T+NT I G  K   +  A  +
Sbjct: 505 PNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNV 564

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +     + D   YN +I+G  + G +E A  +F+ +    +  D  TY  +I+G   
Sbjct: 565 FNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVT 624

Query: 309 DGQMDKAHDLFLDMEENAVAPN 330
            G   +A  L  +M     AP+
Sbjct: 625 AGNSKEAFQLHDEMMHRGFAPD 646



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 160/288 (55%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G+ C P+ VTYNT+++GLCK+  +  A+ L  +MK   + PD+ T+ +LIHG C   ++
Sbjct: 359 VGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNF 418

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            +A +LF  ++ Q ++P VV +N ++D +C+ G + +A+ L D M  R++ PN  TYS L
Sbjct: 419 EKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSIL 478

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D  C  G++  A      M S G   + ++YN +I GYC++  V++     ++M+   I
Sbjct: 479 IDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNI 538

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P ++T+NTL  G  +   +  A  +F  M+++ V  D  TYN  I+G  + G + EA  
Sbjct: 539 LPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGR 598

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           +F+ +G    E D   Y  LI+G   +G  + A +L   +  R    D
Sbjct: 599 VFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 157/306 (51%), Gaps = 3/306 (0%)

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA RL   ++    + +  T N+++   CK+ + D+A  ++  M +R V P+  T++ L+
Sbjct: 143 EAYRL---VLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLI 199

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           D     G ++ A  L  SM + G K   V++N ++ G CK++  ++A  ++R M    + 
Sbjct: 200 DARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVA 259

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P V ++N L  G   + +VE A+K ++EMQ+  V  D  +++  I      G +  A   
Sbjct: 260 PDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAY 319

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            R +  L    D   Y  +I G C++G +  AL +   +     + DVVTYN +++GLC 
Sbjct: 320 LREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCK 379

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
             ++  A +L  +M+E  V P++  F TLIHG+ R     K ++L   +  +++ PD   
Sbjct: 380 QHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVA 439

Query: 369 VSMVVD 374
            + ++D
Sbjct: 440 YNSLID 445



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 79/143 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +TYN+II G C+ G V K +    +M  +NI PD++T+N+LIHG     + + A  +
Sbjct: 505 PNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNV 564

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M  + VQP  VT+N+I++   + G M+EA R+   M    + P+ +TY +L++G   
Sbjct: 565 FNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVT 624

Query: 134 TGKINRAEELFGSMESMGCKHDD 156
            G    A +L   M   G   DD
Sbjct: 625 AGNSKEAFQLHDEMMHRGFAPDD 647



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 104/218 (47%)

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +++LI  Y ++++  EA   +R ++   +       N L   L        A + +  + 
Sbjct: 90  FDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEAYRLVL 149

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
             D   +  T N  +   CK+    +A  +   +       D+  +N LID   ++G ++
Sbjct: 150 SSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVD 209

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A+ L  S+  + L   +VT+N ++ GLC   + DKA ++F  M++ +VAP+V  F  LI
Sbjct: 210 AAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILI 269

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            GF R+ +  + ++   +M+++ V PD    S ++ L 
Sbjct: 270 GGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLF 307


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 129/376 (34%), Positives = 205/376 (54%), Gaps = 19/376 (5%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+GV   PN  TYNT++DG CK     +A  L+  M GE + PDVVT+  LI GLC   +
Sbjct: 245 EVGVY--PNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGE 302

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
              A+ LF  M+   V P++  +N ++D  CK G + EA  L   + + +V P+ FTYS 
Sbjct: 303 MKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSI 362

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ G C   +   A  +F  M   G   + V+YN LI+G CK  ++++AL +  +M   G
Sbjct: 363 LIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENG 422

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           ++P V+T++TL  G  +I  ++ A+ ++ EM    ++ D  TY   IDG CK G + EA+
Sbjct: 423 VEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEAL 482

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR-----SLPR--------RVLV 293
           +L+  +       +    +CL+DGLCK G++  ALELF        PR        +  +
Sbjct: 483 KLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSL 542

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            + V Y  +IHGLC DGQ  KA  LF DM    + P+ +I+V ++ G  ++     ++ +
Sbjct: 543 TNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVK---YILMM 599

Query: 354 LHK-MKEKKVMPDASI 368
           LH  M +  V+P++++
Sbjct: 600 LHADMLKFGVIPNSAV 615



 Score =  224 bits (570), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 119/342 (34%), Positives = 189/342 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ +T+ T+IDG C++G + +A+ +F +M+ + I P V+ Y  LI GLC  N   EA+ 
Sbjct: 179 SPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAES 238

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M + GV P+V T+N +MD  CK     +A RL   M+   + P+  T+  L+DG C
Sbjct: 239 MHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLC 298

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A  LF +M       +   YN LI+ YCK  +V EA++L+ E+    + P V 
Sbjct: 299 KFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVF 358

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L  GL  + + E A  +FE+M ++ + A++ TYN+ IDG CK G + +A+E+   +
Sbjct: 359 TYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQM 418

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                E ++  ++ LIDG CK   L+ A+ ++  +  + L  DVVTY  MI G C  G M
Sbjct: 419 TENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSM 478

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
            +A  L+ DM +N + PN      L+ G  +  K S  +EL 
Sbjct: 479 KEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELF 520



 Score =  210 bits (534), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 194/361 (53%), Gaps = 5/361 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   Y  +I  LCK   V++A +++ ++ G  +   +   N L++ L     +    R+
Sbjct: 115 PNV--YGELIIVLCKMELVEEALSMYHKV-GAALT--IQACNVLLYVLVKTGRFELLWRI 169

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + EM+  G+ PSV+TF  ++D  C+ G +  A  + D M  + + P    Y+ L+ G C 
Sbjct: 170 YEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCS 229

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             KI  AE +  +M  +G   +  +YN L++GYCK    ++AL LY++M+ +G+ P VVT
Sbjct: 230 DNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVT 289

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  GL +  +++ A  LF  M +  V  + + YN+ ID  CK G + EA+ LF  L 
Sbjct: 290 FGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELE 349

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +   D+  Y+ LI GLC   R E A  +F  + +  ++A+ VTYN +I G C +G+MD
Sbjct: 350 RFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMD 409

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA ++   M EN V PNVI F TLI G+ +I      + +  +M  K + PD    + ++
Sbjct: 410 KALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMI 469

Query: 374 D 374
           D
Sbjct: 470 D 470



 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 190/358 (53%), Gaps = 6/358 (1%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N ++  L K G  +    ++ +M    ++P V+T+ +LI G C   D   A+ +F EM  
Sbjct: 151 NVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRV 210

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
           +G+ P+V+ + +++  LC + K++EA  +   M +  V PN +TY+TLMDG+C      +
Sbjct: 211 KGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQ 270

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A  L+  M   G   D V++ ILI+G CK  E++ A +L+  M+   + P +  YN+L  
Sbjct: 271 ALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLID 330

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILK 256
              ++  V  A+ LF E++R +V+ D  TY+  I GLC      EA  +F  +   GIL 
Sbjct: 331 AYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILA 390

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
             +    YN LIDG CK G+++ ALE+   +    +  +V+T++ +I G C    +  A 
Sbjct: 391 NSV---TYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAM 447

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            ++ +M   +++P+V+ +  +I G  +     + ++L   M +  + P+   +S ++D
Sbjct: 448 GIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLD 505



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 176/371 (47%), Gaps = 24/371 (6%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGL--CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC 62
           NG +  V   +++T +++I  +  C+  +  KA   F     +NI      Y+++IH L 
Sbjct: 16  NGTMLQVVSLSSLTPDSLITTVLNCRSPW--KALEFFNAAPEKNIQ----LYSAIIHVLV 69

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
            +   + A+ L                N ++  L K+ K   A +L    + R ++ + F
Sbjct: 70  GSKLLSHARYLL---------------NDLVQNLVKSHKPYHACQLAFSELSR-LKSSKF 113

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           T +   +   +  K+   EE       +G      + N+L+    K    E    +Y EM
Sbjct: 114 TPNVYGELIIVLCKMELVEEALSMYHKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEM 173

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
           +S G+ P+V+T+ TL  G      +  A ++F+EM+   +      Y   I GLC +  I
Sbjct: 174 ISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKI 233

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            EA  + R +  +    ++  YN L+DG CK    + AL L++ +    LV DVVT+ I+
Sbjct: 234 EEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGIL 293

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I GLC  G+M  A +LF++M + +V PN+ ++ +LI  + ++   S+ + L  +++  +V
Sbjct: 294 IDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEV 353

Query: 363 MPDASIVSMVV 373
            PD    S+++
Sbjct: 354 SPDVFTYSILI 364



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 117/221 (52%), Gaps = 19/221 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +T++T+IDG CK   +  A  ++ +M  ++++PDVVTY ++I G C      EA +
Sbjct: 424 EPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALK 483

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV----------RP--- 119
           L+ +M+D G+ P+  T + ++D LCK+GK+ +A  L    ++             +P   
Sbjct: 484 LYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLT 543

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           N   Y+ L+ G C  G+ ++A +LF  M   G + D+V Y +++ G  + K +   + L+
Sbjct: 544 NHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI--LMMLH 601

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            +M+  G+ P     + + + L E +Q    LK  +   +D
Sbjct: 602 ADMLKFGVIPN----SAVHVILCECYQESGFLKSAQNCSKD 638


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 123/314 (39%), Positives = 187/314 (59%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G   KP+ V YNTII+ LCK   +  A  ++ +M  + I+PDVVTY +LIHG C      
Sbjct: 190 GHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLK 249

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  L  EM  + + P+V TFN+++D L K GKM EA  LL +M++  ++P+ FTY++L+
Sbjct: 250 EAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLI 309

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+ L  ++  A+ +F SM   G   D   Y  +ING CK K V+EA+SL+ EM  K + 
Sbjct: 310 DGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMI 369

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P +VTYN+L  GL + H +E A+ L + M+   +  D  +Y   +DGLCK+G + +A E+
Sbjct: 370 PDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEI 429

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F+ L      L++ AY  LI+ LCK+G  + AL+L   +  +  + D VT++I+I  L  
Sbjct: 430 FQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFE 489

Query: 309 DGQMDKAHDLFLDM 322
             + DKA  +  +M
Sbjct: 490 KDENDKAEKILREM 503



 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 118/343 (34%), Positives = 190/343 (55%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + V+Y T+I+GLCK G       L  +++G ++ PDVV YN++I+ LC      +A  ++
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY 220

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ +G+ P VVT+  ++   C  G + EA  LL+ M  +++ PN  T++ L+D     
Sbjct: 221 SEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKE 280

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK+  A+ L   M     K D  +YN LI+GY    EV+ A  ++  M  +G+ P V  Y
Sbjct: 281 GKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCY 340

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             +  GL +   V+ A+ LFEEM+  ++  D  TYN+ IDGLCKN ++  A+ L + +  
Sbjct: 341 TNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKE 400

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + D+ +Y  L+DGLCKSGRLE A E+F+ L  +    +V  Y ++I+ LC  G  D+
Sbjct: 401 QGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDE 460

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           A DL   ME+    P+ + F  +I      ++  K  ++L +M
Sbjct: 461 ALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREM 503



 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 121/363 (33%), Positives = 192/363 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +T NT+I GLC  G + KA     Q+  +    D V+Y +LI+GLC   +     RL
Sbjct: 125 PNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARL 184

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++    V+P VV +N I++ LCKN  + +A  +   M+ + + P+  TY+TL+ GFC+
Sbjct: 185 LRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCI 244

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A  L   M+      +  ++NILI+   K  +++EA  L   M+   IKP V T
Sbjct: 245 MGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFT 304

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L  G F + +V+HA  +F  M +  V  D   Y   I+GLCK   + EA+ LF  + 
Sbjct: 305 YNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMK 364

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 DI  YN LIDGLCK+  LE A+ L + +  + +  DV +Y I++ GLC  G+++
Sbjct: 365 HKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLE 424

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A ++F  +       NV  +  LI+   +     + ++L  KM++K  MPDA    +++
Sbjct: 425 DAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIII 484

Query: 374 DLL 376
             L
Sbjct: 485 RAL 487



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 184/361 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P T  +N I+  L          +LF Q +   I PD+ T + LI+  CH      A  +
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  ++ +G  P+ +T N ++  LC  G++ +A    D +V +  + +  +Y TL++G C 
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG+      L   +E    K D V YN +IN  CKNK + +A  +Y EM+ KGI P VVT
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G   +  ++ A  L  EM+  ++  +  T+N  ID L K G + EA  L   + 
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+  YN LIDG      ++ A  +F S+ +R +  DV  Y  MI+GLC    +D
Sbjct: 295 KACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVD 354

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  LF +M+   + P+++ + +LI G  + +   + I L  +MKE+ + PD    ++++
Sbjct: 355 EAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILL 414

Query: 374 D 374
           D
Sbjct: 415 D 415



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 121/266 (45%)

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
            +LM+     P  F ++ ++              LF   E  G   D  + +ILIN +C 
Sbjct: 45  FNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCH 104

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
              +  A S++  ++ +G  P  +T NTL  GL    +++ AL   +++       D  +
Sbjct: 105 QAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVS 164

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           Y T I+GLCK G       L R L     + D+  YN +I+ LCK+  L  A +++  + 
Sbjct: 165 YGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 224

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
            + +  DVVTY  +IHG C  G + +A  L  +M+   + PNV  F  LI    +  K  
Sbjct: 225 VKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMK 284

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVD 374
           +   LL  M +  + PD    + ++D
Sbjct: 285 EAKILLAVMMKACIKPDVFTYNSLID 310



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 118/258 (45%)

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           P A   +TL          + A   F  M  M        +N +++    NK     +SL
Sbjct: 20  PIAIPTATLHSQPHSHHHHHHAVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISL 79

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
           +++    GI P + T + L         +  A  +F  + +     +  T NT I GLC 
Sbjct: 80  FKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCF 139

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
            G I +A+     L     +LD  +Y  LI+GLCK+G  +    L R L    +  DVV 
Sbjct: 140 RGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVM 199

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           YN +I+ LC +  +  A D++ +M    ++P+V+ + TLIHGF  +    +   LL++MK
Sbjct: 200 YNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMK 259

Query: 359 EKKVMPDASIVSMVVDLL 376
            K + P+    ++++D L
Sbjct: 260 LKNINPNVCTFNILIDAL 277



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 62/103 (60%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  +Y  ++DGLCK G ++ AK +F ++  +  + +V  Y  LI+ LC A  ++EA  
Sbjct: 404 QPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALD 463

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           L  +M D+G  P  VTF++I+  L +  + D+A ++L  M+ R
Sbjct: 464 LKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIAR 506


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  231 bits (588), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 191/360 (53%), Gaps = 3/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +   T+I G C+ G   KA  +   ++G    PDV+TYN +I G C A + N A  +
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M    V P VVT+N I+  LC +GK+ +A  +LD M+QRD  P+  TY+ L++  C 
Sbjct: 195 LDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +  A +L   M   GC  D V+YN+L+NG CK   ++EA+    +M S G +P V+T
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N +   +    +   A KL  +M R   +    T+N  I+ LC+ G +  A+++   + 
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C+ +  +YN L+ G CK  +++ A+E    +  R    D+VTYN M+  LC DG+++
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A ++   +     +P +I + T+I G  +  K  K I+LL +M+ K + PD    S +V
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491



 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 194/356 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY  +I+  C++  V  A  L  +M+     PDVVTYN L++G+C     +EA 
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +   +M   G QP+V+T N+I+  +C  G+  +A +LL  M+++   P+  T++ L++  
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + RA ++   M   GC+ + +SYN L++G+CK K+++ A+     MVS+G  P +
Sbjct: 355 CRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNT+   L +  +VE A+++  ++     +    TYNT IDGL K G   +A++L   
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D   Y+ L+ GL + G+++ A++ F    R  +  + VT+N ++ GLC   Q
Sbjct: 475 MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ 534

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            D+A D  + M      PN   +  LI G        + +ELL+++  K +M  +S
Sbjct: 535 TDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSS 590



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 195/363 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNTI+  LC  G + +A  +  +M   +  PDV+TY  LI   C  +    A +L
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM D+G  P VVT+NV+++ +CK G++DEA + L+ M     +PN  T++ ++   C 
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG+   AE+L   M   G     V++NILIN  C+   +  A+ +  +M   G +P  ++
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +  +++ A++  E M       D  TYNT +  LCK+G + +AVE+   L 
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C   +  YN +IDGL K+G+   A++L   +  + L  D +TY+ ++ GL  +G++D
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A   F + E   + PN + F +++ G  +  +  + I+ L  M  +   P+ +  ++++
Sbjct: 502 EAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561

Query: 374 DLL 376
           + L
Sbjct: 562 EGL 564



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 187/353 (52%), Gaps = 3/353 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TYN +I G CK G ++ A ++  +M   +++PDVVTYN+++  LC +    +A  +
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEV 226

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+ +   P V+T+ ++++  C++  +  A +LLD M  R   P+  TY+ L++G C 
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A +    M S GC+ + +++NI++   C      +A  L  +M+ KG  P+VVT
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L   L     +  A+ + E+M +     ++ +YN  + G CK   +  A+E    + 
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  DI  YN ++  LCK G++E A+E+   L  +     ++TYN +I GL   G+  
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           KA  L  +M    + P+ I + +L+ G  R  K  + I+  H+ +   + P+A
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 158/314 (50%), Gaps = 3/314 (0%)

Query: 52  VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL 111
           V  N+ +  +    +  E  +    M+  G  P ++    ++   C+ GK  +A+++L++
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           +      P+  TY+ ++ G+C  G+IN A      ++ M    D V+YN ++   C + +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNA---LSVLDRMSVSPDVVTYNTILRSLCDSGK 219

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           +++A+ +   M+ +   P V+TY  L         V HA+KL +EM+      D  TYN 
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            ++G+CK G + EA++    +    C+ ++  +N ++  +C +GR   A +L   + R+ 
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
               VVT+NI+I+ LC  G + +A D+   M ++   PN + +  L+HGF +  K  + I
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 352 ELLHKMKEKKVMPD 365
           E L +M  +   PD
Sbjct: 400 EYLERMVSRGCYPD 413



 Score =  160 bits (405), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 150/280 (53%), Gaps = 3/280 (1%)

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
           V  N  + ++ + G+++E  + L+ MV     P+    +TL+ GFC  GK  +A ++   
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           +E  G   D ++YN++I+GYCK  E+  ALS+   M    + P VVTYNT+   L +  +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           ++ A+++ + M + D   D  TY   I+  C++  +  A++L   +    C  D+  YN 
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           L++G+CK GRL+ A++    +P      +V+T+NI++  +C+ G+   A  L  DM    
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            +P+V+ F  LI+   R     + I++L KM +    P++
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 116/239 (48%), Gaps = 6/239 (2%)

Query: 141 EELFGSMESM---GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           EE F  +E+M   G   D +    LI G+C+  +  +A  +   +   G  P V+TYN +
Sbjct: 119 EEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVM 178

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G  +  ++ +AL + + M    V+ D  TYNT +  LC +G + +A+E+   +    C
Sbjct: 179 ISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D+  Y  LI+  C+   +  A++L   +  R    DVVTYN++++G+C +G++D+A  
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              DM  +   PNVI    ++       +     +LL  M  K   P     +++++ L
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 3/211 (1%)

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           +DV  N  +    +  E+EE       MV  G  P ++   TL  G   + +   A K+ 
Sbjct: 101 EDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           E ++      D  TYN  I G CK G I  A+ +   + +     D+  YN ++  LC S
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDS 217

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G+L+ A+E+   + +R    DV+TY I+I   C D  +  A  L  +M +    P+V+ +
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY 277

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             L++G  +  +  + I+ L+ M      P+
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  231 bits (588), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 203/364 (55%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY+T+I    + G +  A   F QM    I P+   Y+S+I G C      +AK L
Sbjct: 473 PDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKEL 532

Query: 74  FFEMMDQGV-QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             EM+++G+ +P +V F+ +++ LCK+G++ +A  + DL      RP   T+++L+DG+C
Sbjct: 533 VSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYC 592

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK+++A ++  +ME +G + D V+YN L++GY KN  + + L+L+REM  KG+KP  V
Sbjct: 593 LVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTV 652

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  +  GLF   +   A K F EM         S Y   + GLC+N    EA+ LF+ L
Sbjct: 653 TYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKL 712

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           G +  +  I   N +I+ + K  R E A ELF ++    L+ +  TY +MI  L  DG +
Sbjct: 713 GTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGV 772

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A+++F  ME++ + P   +   +I   +   + +K    L K+  K+++ +AS  S++
Sbjct: 773 EDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLM 832

Query: 373 VDLL 376
           + L 
Sbjct: 833 LSLF 836



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/374 (33%), Positives = 201/374 (53%), Gaps = 16/374 (4%)

Query: 6   GEIGVVC-----------KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTY 54
           GE G  C           KP+ VTYN IID LCK   +DKA+ +  QM  +   PD VTY
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTY 338

Query: 55  NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
           + +IHG        EA ++F EM  +G+ P++VT N  +  LCK+G+  EA+   D M  
Sbjct: 339 SCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTA 398

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
           +  +P+ F+Y TL+ G+   G       LF SM+S G   +   + ILI+ Y K   V++
Sbjct: 399 KGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDD 458

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           A+ ++ EM  +G+ P VVTY+T+      + ++  A++ F +M    +  +T+ Y++ I 
Sbjct: 459 AMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQ 518

Query: 235 GLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
           G C +G +V+A EL   +   GI +   DI  ++ +I+ LCK GR+  A ++F       
Sbjct: 519 GFCMHGGLVKAKELVSEMINKGIPR--PDIVFFSSVINSLCKDGRVMDAHDIFDLATDIG 576

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
               V+T+N +I G C  G+MDKA  +   ME   V P+++ + TL+ G+ +  + +  +
Sbjct: 577 ERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGL 636

Query: 352 ELLHKMKEKKVMPD 365
            L  +M+ K V P+
Sbjct: 637 TLFREMQRKGVKPN 650



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 198/405 (48%), Gaps = 46/405 (11%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVTYNSLIHGLCHANDWNE 69
           C PN V+Y+ ++  LC      +A  L   M  +G   +PDVV Y+++IHG  +  +  +
Sbjct: 224 CVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGK 283

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  LF EM  QGV+P VVT+N+I+D LCK   MD+A  +L  M     +P+  TYS ++ 
Sbjct: 284 ACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIH 343

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+   G++  A ++F  M+  G   + V+ N  +   CK+   +EA   +  M +KG KP
Sbjct: 344 GYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKP 403

Query: 190 TVVTYNTLF------------LGLFE-----------------IHQ------VEHALKLF 214
            + +Y TL             +GLF                  IH       V+ A+ +F
Sbjct: 404 DIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIF 463

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
            EMQ+  V+ D  TY+T I    + G + +A+E F  +     + +   Y+ +I G C  
Sbjct: 464 TEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMH 523

Query: 275 GRLEIALELF-----RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           G L  A EL      + +PR     D+V ++ +I+ LC DG++  AHD+F    +    P
Sbjct: 524 GGLVKAKELVSEMINKGIPR----PDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERP 579

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            VI F +LI G+  + K  K  ++L  M+   V PD    + ++D
Sbjct: 580 GVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLD 624



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 192/367 (52%), Gaps = 3/367 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           V  P   TYN ++D  C+    D   ALF  +    +  D +T N+L+  LC+AN   EA
Sbjct: 152 VAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEA 211

Query: 71  KRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD--VRPNAFTYSTL 127
             +    M + G  P+ V++++++  LC N     A  LL +M ++     P+   YST+
Sbjct: 212 VNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTV 271

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + GF   G+  +A  LF  M   G K D V+YN++I+  CK + +++A  + R+M + G 
Sbjct: 272 IHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGA 331

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P  VTY+ +  G   + +++ A K+F EM++  +  +  T N+F+  LCK+G   EA E
Sbjct: 332 QPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAE 391

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            F ++     + DI +Y  L+ G    G     + LF S+    + A+   + I+IH   
Sbjct: 392 FFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYA 451

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G +D A  +F +M++  V+P+V+ + T+I  F R+ + +  +E  ++M  + + P+ +
Sbjct: 452 KRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTA 511

Query: 368 IVSMVVD 374
           + S ++ 
Sbjct: 512 VYSSIIQ 518



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 169/343 (49%), Gaps = 1/343 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENI-NPDVVTYNSLIHGLCHANDWNEAK 71
           +PNT  Y++II G C  G + KAK L  +M  + I  PD+V ++S+I+ LC      +A 
Sbjct: 507 QPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAH 566

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F    D G +P V+TFN ++D  C  GKMD+A ++LD M    V P+  TY+TL+DG+
Sbjct: 567 DIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGY 626

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+IN    LF  M+  G K + V+Y I++ G  +      A   + EM+  G   TV
Sbjct: 627 FKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTV 686

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y  +  GL   +  + A+ LF+++   +V    +  NT I+ + K     EA ELF T
Sbjct: 687 SIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFAT 746

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       +   Y  +I  L K G +E A  +F S+ +  +V      N +I  L   G+
Sbjct: 747 ISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGE 806

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           + KA +    ++   +         ++  F R  K  + I+LL
Sbjct: 807 IAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLL 849



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 8/175 (4%)

Query: 210 ALKLFEEMQRDDVAADTS-----TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
           AL LF  + R++     +     TYN  +D  C+       + LF  +     ++D    
Sbjct: 136 ALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITA 195

Query: 265 NCLIDGLCKSGRLEIALE-LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
           N L+  LC + R E A+  L   +     V + V+Y+I++  LC++    +A DL   M 
Sbjct: 196 NTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMA 255

Query: 324 EN--AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +   A +P+V+ + T+IHGF    +  K   L H+M  + V PD    ++++D L
Sbjct: 256 KQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDAL 310


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  230 bits (587), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 119/352 (33%), Positives = 199/352 (56%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +T+N +I  LCK+G V +++ LF ++    + P++ T+N  I GLC     +EA RL
Sbjct: 214 PDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARL 273

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              ++ +G+ P V+++N ++   CK+ K+ EA   L  MV   V PN FTY+T+++GFC 
Sbjct: 274 LESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCK 333

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A+++       G   D+ +Y+ LING C + ++  A++++ E + KG K +++ 
Sbjct: 334 AGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIIL 393

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL +   V  AL+L ++M     + D  TYN  ++GLCK G + +A  +     
Sbjct: 394 YNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI 453

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  DI  +N LIDG CK   ++ A+E+  ++    +  DV+TYN +++GLC   ++D
Sbjct: 454 AKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLD 513

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
              D F  M E    PN+I +  LI  F +  K S+ +EL  +MK + + PD
Sbjct: 514 NVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565



 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 206/400 (51%), Gaps = 37/400 (9%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC PN  T+N  I GLC++G +D+A  L   +  E + PDV++YN+LI G C  +   EA
Sbjct: 247 VC-PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEA 305

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           +    +M++ GV+P+  T+N I++  CK G M  A ++L   + +   P+ FTYS+L++G
Sbjct: 306 ECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLING 365

Query: 131 FCLTGKINRAEELF-----------------------------------GSMESMGCKHD 155
            C  G +NRA  +F                                     M   GC  D
Sbjct: 366 LCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPD 425

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
             +YN+++NG CK   + +A  +  + ++KG  P + T+NTL  G  +   ++ A+++ +
Sbjct: 426 IWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILD 485

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
            M    +  D  TYNT ++GLCK   +   V+ F+ +    C  +I  YN LI+  CK  
Sbjct: 486 TMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDR 545

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME-ENAVAPNVIIF 334
           ++  A+ELF+ +  R L  D+VT   +I GLC++G++DKA++LF+ +E E   + +  IF
Sbjct: 546 KVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIF 605

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +I+ F      S   +L HKM      PD     +++D
Sbjct: 606 NIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMID 645



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 192/365 (52%), Gaps = 1/365 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TYNTII+G CK G +  A  +      +   PD  TY+SLI+GLC+  D N A  
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F+E M++G + S++ +N ++  L K G + +A +L+  M++    P+ +TY+ +++G C
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A  +     + GC  D  ++N LI+GYCK + +++A+ +   M+S GI P V+
Sbjct: 438 KMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI 497

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GL +  ++++ +  F+ M       +  TYN  I+  CK+  + EA+ELF+ +
Sbjct: 498 TYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEM 557

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA-DVVTYNIMIHGLCNDGQ 311
                  DI     LI GLC +G L+ A ELF ++ +    +     +NIMI+  C    
Sbjct: 558 KTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLN 617

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +  A  LF  M  +  AP+   +  +I  + +          L +   K ++P  +    
Sbjct: 618 VSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGK 677

Query: 372 VVDLL 376
           V++ L
Sbjct: 678 VLNCL 682



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 193/389 (49%), Gaps = 35/389 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDV-------------------- 51
           C+P+  +YN I++ L + G+  +A  ++++MK   I PDV                    
Sbjct: 107 CEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAAL 166

Query: 52  ---------------VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
                          V+Y ++I G    N   EA  LF EM+ QG+ P ++TFN ++  L
Sbjct: 167 RLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVL 226

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           CK G + E+ +L   +++R V PN FT++  + G C  G I+ A  L  S+ S G   D 
Sbjct: 227 CKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDV 286

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           +SYN LI G+CK+ ++ EA     +MV+ G++P   TYNT+  G  +   +++A K+  +
Sbjct: 287 ISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRD 346

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
                   D  TY++ I+GLC +G +  A+ +F        +  I  YN L+ GL K G 
Sbjct: 347 AMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGL 406

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +  AL+L + +       D+ TYN++++GLC  G +  A+ +  D       P++  F T
Sbjct: 407 VLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNT 466

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LI G+ +     K IE+L  M    + PD
Sbjct: 467 LIDGYCKQRNMDKAIEILDTMLSHGITPD 495



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 174/318 (54%), Gaps = 1/318 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + + YNT++ GL K+G V +A  L   M     +PD+ TYN +++GLC     ++A  
Sbjct: 388 KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANG 447

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  + + +G  P + TFN ++D  CK   MD+A  +LD M+   + P+  TY+TL++G C
Sbjct: 448 ILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLC 507

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K++   + F +M   GC  + ++YNILI  +CK+++V EA+ L++EM ++G+ P +V
Sbjct: 508 KARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIV 567

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           T  TL  GL    +++ A +LF  ++++   +  T+ +N  I+  C+   +  A +LF  
Sbjct: 568 TLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHK 627

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +G   C  D   Y  +ID  CK+G +++A         + LV    T   +++ LC   +
Sbjct: 628 MGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHR 687

Query: 312 MDKAHDLFLDMEENAVAP 329
           + +A  +   M +N + P
Sbjct: 688 LSEAVVIINLMVQNGIVP 705



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 191/396 (48%), Gaps = 38/396 (9%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVV--TYNSLIHGLCHANDWNEAKRLFF 75
           TY  +I+ L   G  +  + +  +M+ +N++  ++   Y  ++          EA  +F 
Sbjct: 42  TYKCMIEKLGLHGKFEAMEDVLAEMR-KNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFE 100

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
            M     +PSV ++N IM+ L + G   +A ++   M    + P+ +T++  M  FC+TG
Sbjct: 101 RMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITG 160

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           +   A  L  +M   GC+ + VSY  +I+G+ K     EA  L+ EM+ +GI P ++T+N
Sbjct: 161 RPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFN 220

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL--- 252
            L   L +   V+ + KLF ++ +  V  +  T+N FI GLC+ G I EA  L  ++   
Sbjct: 221 KLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSE 280

Query: 253 --------------GILKCELDIQA------------------YNCLIDGLCKSGRLEIA 280
                         G  K    ++A                  YN +I+G CK+G ++ A
Sbjct: 281 GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNA 340

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            ++ R    +  + D  TY+ +I+GLCNDG M++A  +F +  E     ++I++ TL+ G
Sbjct: 341 DKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKG 400

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +     + ++L+  M E    PD    ++VV+ L
Sbjct: 401 LSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436



 Score =  140 bits (353), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 120/233 (51%), Gaps = 3/233 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TYN +++GLCK G +  A  +      +   PD+ T+N+LI G C   + ++A 
Sbjct: 422 CSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAI 481

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   M+  G+ P V+T+N +++ LCK  K+D        M+++   PN  TY+ L++ F
Sbjct: 482 EILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESF 541

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++ A ELF  M++ G   D V+   LI G C N E+++A  L+   + K  K + 
Sbjct: 542 CKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFV-TIEKEYKFSY 600

Query: 192 VT--YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
            T  +N +     E   V  A KLF +M   D A D  TY   ID  CK G I
Sbjct: 601 STAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNI 653



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 126/248 (50%), Gaps = 3/248 (1%)

Query: 2   ANG--NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIH 59
           ANG  N  I   C P+  T+NT+IDG CK+  +DKA  +   M    I PDV+TYN+L++
Sbjct: 445 ANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLN 504

Query: 60  GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
           GLC A   +     F  M+++G  P+++T+N++++  CK+ K+ EA  L   M  R + P
Sbjct: 505 GLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP 564

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMES-MGCKHDDVSYNILINGYCKNKEVEEALSL 178
           +  T  TL+ G C  G++++A ELF ++E      +    +NI+IN +C+   V  A  L
Sbjct: 565 DIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKL 624

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
           + +M      P   TY  +     +   ++ A     E     +    +T    ++ LC 
Sbjct: 625 FHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCV 684

Query: 239 NGYIVEAV 246
              + EAV
Sbjct: 685 THRLSEAV 692



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 91/204 (44%), Gaps = 2/204 (0%)

Query: 175 ALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTF 232
           AL ++ ++ ++ G K T+ TY  +   L    + E    +  EM+++ D       Y   
Sbjct: 23  ALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGI 82

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           +    + G + EAV +F  +    CE  +Q+YN +++ L + G    A +++  +    +
Sbjct: 83  MRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGI 142

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
             DV T+ I +   C  G+   A  L  +M       N + +  +I GF + N   +   
Sbjct: 143 YPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYH 202

Query: 353 LLHKMKEKKVMPDASIVSMVVDLL 376
           L  +M ++ + PD    + ++ +L
Sbjct: 203 LFDEMLKQGICPDILTFNKLIHVL 226



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 5/122 (4%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C P+  TY  +ID  CK G +D A    L+   + + P   T   +++ LC  +  +
Sbjct: 630 GSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLS 689

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  +   M+  G+ P  V  N I +    + K   A +++   + +      ++Y  L 
Sbjct: 690 EAVVIINLMVQNGIVPEEV--NSIFE---ADKKEVAAPKIVVEYLLKKSHITYYSYELLY 744

Query: 129 DG 130
           DG
Sbjct: 745 DG 746


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  230 bits (587), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 130/364 (35%), Positives = 199/364 (54%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN++I GLCK G V++A  +  QM   + +P+ VTYN+LI  LC  N   EA  L
Sbjct: 349 PDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATEL 408

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              +  +G+ P V TFN ++  LC       A  L + M  +   P+ FTY+ L+D  C 
Sbjct: 409 ARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCS 468

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A  L   MES GC  + V+YN LI+G+CKNK +EEA  ++ EM  +GI   VVT
Sbjct: 469 RGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVT 528

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL +  +VE A +L ++M  + +  D  TYN+ +   C+ G I +A ++ +T+ 
Sbjct: 529 YNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMT 588

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              CE D   Y  LI GL K+GR+E+A  L R++  + +V    TYN +I  L  + +  
Sbjct: 589 SNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTS 648

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP-SKVIELLHKMKEKKVMPDASIVSMV 372
           +A  LF +M E    P+ + +  +  G      P  + ++ L +M +K  +PD S   M+
Sbjct: 649 EAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLML 708

Query: 373 VDLL 376
            + L
Sbjct: 709 AEGL 712



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/353 (33%), Positives = 181/353 (51%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +   C  + VT N ++ G CKEG +++  +   +M  E   PD  T+NSL++GLC     
Sbjct: 273 VAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHV 332

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A  +   M+ +G  P + T+N ++  LCK G+++EA  +L+ M+ RD  PN  TY+TL
Sbjct: 333 KHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTL 392

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +   C   ++  A EL   + S G   D  ++N LI G C       A+ L+ EM +KG 
Sbjct: 393 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGC 452

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P   TYN L   L    ++E AL L +EM+    + +  TYNT IDG CKN  I EA E
Sbjct: 453 HPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEE 512

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +F  + +     ++  YN LIDGLCK+ R+E A +L   +    L  D  TYN ++   C
Sbjct: 513 IFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFC 572

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
             G + KA D+   M  N   P+ + + TLI G  +  +      LL  ++ K
Sbjct: 573 RAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLK 625



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 118/353 (33%), Positives = 187/353 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  T+N +I  LC+   +  A  +  +M    ++PD  T+ +L+ G     + N A R
Sbjct: 208 KPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALR 267

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M+  G   S VT NV++   CK G+++E    +D M     RP+ FT+++L++G C
Sbjct: 268 IREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLC 327

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A E+   M   G   D  +YN LI G CK  EVEEA+ +  +M+ +   P  V
Sbjct: 328 RIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTV 387

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL   L + +QVE A +L   +    +  D  T+N+ I GLC       A+ELF  +
Sbjct: 388 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEM 447

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D   YN LID LC  GRLE AL L + +       +VVTYN +I G C + ++
Sbjct: 448 KTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRI 507

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++A ++F +ME   ++ NV+ + TLI G  +  +  +  +L+ +M  + + PD
Sbjct: 508 EEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPD 560



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/353 (33%), Positives = 185/353 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+ T++ G  +EG ++ A  +  QM         VT N L+HG C      E    
Sbjct: 244 PDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSF 303

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM ++G +P   TFN +++ LC+ G +  A  +LD+M+Q    P+ FTY++L+ G C 
Sbjct: 304 IDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCK 363

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A E+   M       + V+YN LI+  CK  +VEEA  L R + SKGI P V T
Sbjct: 364 LGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 423

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N+L  GL   +    A++LFEEM+      D  TYN  ID LC  G + EA+ L + + 
Sbjct: 424 FNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEME 483

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  ++  YN LIDG CK+ R+E A E+F  +  + +  +VVTYN +I GLC + +++
Sbjct: 484 SSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVE 543

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +A  L   M    + P+   + +L+  F R     K  +++  M      PD+
Sbjct: 544 EAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDS 596



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 189/367 (51%), Gaps = 6/367 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +  TYN +++ L     +   + +  +M    I PDV T+N LI  LC A+    A  
Sbjct: 173 KLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAIL 232

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM   G+ P   TF  +M    + G M+ A R+ + MV      +  T + L+ G+C
Sbjct: 233 MMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYC 292

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+I         M + G + D  ++N L+NG C+   V+ AL +   M+ +G  P + 
Sbjct: 293 KEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIF 352

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  GL ++ +VE A+++  +M   D + +T TYNT I  LCK   + EA EL R L
Sbjct: 353 TYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVL 412

Query: 253 ---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
              GIL    D+  +N LI GLC +    +A+ELF  +  +    D  TYN++I  LC+ 
Sbjct: 413 TSKGILP---DVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSR 469

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++++A  L  +ME +  + NV+ + TLI GF +  +  +  E+  +M+ + +  +    
Sbjct: 470 GRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTY 529

Query: 370 SMVVDLL 376
           + ++D L
Sbjct: 530 NTLIDGL 536



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 97/262 (37%), Positives = 145/262 (55%), Gaps = 1/262 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TYN +ID LC  G +++A +L  +M+    + +VVTYN+LI G C      EA+
Sbjct: 452 CHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAE 511

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F EM  QG+  +VVT+N ++D LCKN +++EA++L+D M+   ++P+ FTY++L+  F
Sbjct: 512 EIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYF 571

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I +A ++  +M S GC+ D V+Y  LI G  K   VE A  L R +  KG+    
Sbjct: 572 CRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAP 631

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK-NGYIVEAVELFR 250
            TYN +   LF   +   A++LF EM       D  TY     GLC   G I EAV+   
Sbjct: 632 QTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLV 691

Query: 251 TLGILKCELDIQAYNCLIDGLC 272
            +       D  ++  L +GLC
Sbjct: 692 EMTDKGFLPDFSSFLMLAEGLC 713



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 176/364 (48%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P++V Y  ++  L K+G     + +  +MK         T+  LI        ++EA  +
Sbjct: 103 PSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAV 162

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              M ++ G++    T+N +++ L    K+     +   MV R ++P+  T++ L+   C
Sbjct: 163 VDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALC 222

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +I  A  +   M S G   D+ ++  L+ G+ +   +  AL +  +MV+ G   + V
Sbjct: 223 RAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNV 282

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T N L  G  +  ++E  L   +EM  +    D  T+N+ ++GLC+ G++  A+E+   +
Sbjct: 283 TVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVM 342

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + DI  YN LI GLCK G +E A+E+   +  R    + VTYN +I  LC + Q+
Sbjct: 343 LQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQV 402

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A +L   +    + P+V  F +LI G    N     +EL  +MK K   PD    +M+
Sbjct: 403 EEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNML 462

Query: 373 VDLL 376
           +D L
Sbjct: 463 IDSL 466


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  230 bits (586), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 131/357 (36%), Positives = 197/357 (55%), Gaps = 18/357 (5%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G +   N V Y+TIID LCKE  V +A  L+ QM  + ++PDVVT+++LI+G C    + 
Sbjct: 181 GKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFK 240

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  LF EM+   + P V TFN+++D LCK G   E   +L +M++              
Sbjct: 241 EAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKE------------- 287

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
                  ++N+A+ +F  +       D  SY I+I   CK K V+EALSL+ EM  KGI 
Sbjct: 288 -----VNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGIT 342

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  VTY++L  GL +  ++ HA +L ++M      AD  TY +F+  LCKN  + +AV L
Sbjct: 343 PDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVAL 402

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            + +     + +I  YN LIDGLCK GR E A  +F+ L  +     V TYNIMI+GLC 
Sbjct: 403 VKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCL 462

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +G  D+A  L   ME+N   P+V+ + T+I    + ++  K  +LL +M  + ++ +
Sbjct: 463 EGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEE 519



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 188/380 (49%), Gaps = 19/380 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDK--AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           P+ + +N I+  L K    +   A +L+ +++   I P +VT+N++I+  CH  + + A 
Sbjct: 44  PSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAF 103

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  +++  G  P  +T   ++  LC NGK+ EA    D ++ R  R N  +Y  L++G 
Sbjct: 104 SVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGL 163

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+   A ++   ++      + V Y+ +I+  CK K V EA  LY +M+ K + P V
Sbjct: 164 CKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDV 223

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE------- 244
           VT++ L  G   + Q + A  LF EM   ++  D  T+N  +D LCK G   E       
Sbjct: 224 VTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAV 283

Query: 245 ----------AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
                     A  +F  +G  +   D+ +Y  +I  LCK   ++ AL LF  +  + +  
Sbjct: 284 MMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITP 343

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           D VTY+ +I GLC   ++  A +L   M       +VI + + +H   + ++  K + L+
Sbjct: 344 DKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALV 403

Query: 355 HKMKEKKVMPDASIVSMVVD 374
            K+K++ + P+ +  ++++D
Sbjct: 404 KKIKDQGIQPNINTYNILID 423



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 117/235 (49%), Gaps = 2/235 (0%)

Query: 144 FGSMESMGCKHDDVSYNILINGYCK--NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
           F  M  M      + +N ++    K  N     A+SLY  +    I P++VT+NT+    
Sbjct: 34  FYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCY 93

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
             + +++ A  +  ++ +     DT T  T I GLC NG + EA+     +      L+ 
Sbjct: 94  CHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNE 153

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
            +Y  LI+GLCK G    AL++ R +  +++  +VV Y+ +I  LC +  + +A++L+  
Sbjct: 154 VSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQ 213

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           M    V+P+V+ F  LI+GF  + +  +   L H+M    + PD    +++VD L
Sbjct: 214 MIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDAL 268


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  230 bits (586), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 119/352 (33%), Positives = 199/352 (56%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +T+N +I  LCK+G V +++ LF ++    + P++ T+N  I GLC     +EA RL
Sbjct: 214 PDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARL 273

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              ++ +G+ P V+++N ++   CK+ K+ EA   L  MV   V PN FTY+T+++GFC 
Sbjct: 274 LESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCK 333

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A+++       G   D+ +Y+ LING C + ++  A++++ E + KG K +++ 
Sbjct: 334 AGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIIL 393

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL +   V  AL+L ++M     + D  TYN  ++GLCK G + +A  +     
Sbjct: 394 YNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI 453

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  DI  +N LIDG CK   ++ A+E+  ++    +  DV+TYN +++GLC   ++D
Sbjct: 454 AKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLD 513

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
              D F  M E    PN+I +  LI  F +  K S+ +EL  +MK + + PD
Sbjct: 514 NVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 206/400 (51%), Gaps = 37/400 (9%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC PN  T+N  I GLC++G +D+A  L   +  E + PDV++YN+LI G C  +   EA
Sbjct: 247 VC-PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEA 305

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           +    +M++ GV+P+  T+N I++  CK G M  A ++L   + +   P+ FTYS+L++G
Sbjct: 306 ECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLING 365

Query: 131 FCLTGKINRAEELF-----------------------------------GSMESMGCKHD 155
            C  G +NRA  +F                                     M   GC  D
Sbjct: 366 LCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPD 425

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
             +YN+++NG CK   + +A  +  + ++KG  P + T+NTL  G  +   ++ A+++ +
Sbjct: 426 IWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILD 485

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
            M    +  D  TYNT ++GLCK   +   V+ F+ +    C  +I  YN LI+  CK  
Sbjct: 486 TMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDR 545

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME-ENAVAPNVIIF 334
           ++  A+ELF+ +  R L  D+VT   +I GLC++G++DKA++LF+ +E E   + +  IF
Sbjct: 546 KVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIF 605

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +I+ F      S   +L HKM      PD     +++D
Sbjct: 606 NIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMID 645



 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 192/365 (52%), Gaps = 1/365 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TYNTII+G CK G +  A  +      +   PD  TY+SLI+GLC+  D N A  
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F+E M++G + S++ +N ++  L K G + +A +L+  M++    P+ +TY+ +++G C
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A  +     + GC  D  ++N LI+GYCK + +++A+ +   M+S GI P V+
Sbjct: 438 KMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI 497

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GL +  ++++ +  F+ M       +  TYN  I+  CK+  + EA+ELF+ +
Sbjct: 498 TYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEM 557

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA-DVVTYNIMIHGLCNDGQ 311
                  DI     LI GLC +G L+ A ELF ++ +    +     +NIMI+  C    
Sbjct: 558 KTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLN 617

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +  A  LF  M  +  AP+   +  +I  + +          L +   K ++P  +    
Sbjct: 618 VSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGK 677

Query: 372 VVDLL 376
           V++ L
Sbjct: 678 VLNCL 682



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 193/389 (49%), Gaps = 35/389 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDV-------------------- 51
           C+P+  +YN I++ L + G+  +A  ++++MK   I PDV                    
Sbjct: 107 CEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAAL 166

Query: 52  ---------------VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
                          V+Y ++I G    N   EA  LF EM+ QG+ P ++TFN ++  L
Sbjct: 167 RLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVL 226

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           CK G + E+ +L   +++R V PN FT++  + G C  G I+ A  L  S+ S G   D 
Sbjct: 227 CKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDV 286

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           +SYN LI G+CK+ ++ EA     +MV+ G++P   TYNT+  G  +   +++A K+  +
Sbjct: 287 ISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRD 346

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
                   D  TY++ I+GLC +G +  A+ +F        +  I  YN L+ GL K G 
Sbjct: 347 AMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGL 406

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +  AL+L + +       D+ TYN++++GLC  G +  A+ +  D       P++  F T
Sbjct: 407 VLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNT 466

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LI G+ +     K IE+L  M    + PD
Sbjct: 467 LIDGYCKQRNMDKAIEILDTMLSHGITPD 495



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 173/318 (54%), Gaps = 1/318 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + + YNT++ GL K+G V +A  L   M     +PD+ TYN +++GLC     ++A  
Sbjct: 388 KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANG 447

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  + + +G  P + TFN ++D  CK   MD+A  +LD M+   + P+  TY+TL++G C
Sbjct: 448 ILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLC 507

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K++   + F +M   GC  + ++YNILI  +CK+++V EA+ L++EM ++G+ P +V
Sbjct: 508 KARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIV 567

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           T  TL  GL    +++ A +LF  ++++   +  T+ +N  I+  C    +  A +LF  
Sbjct: 568 TLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHK 627

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +G   C  D   Y  +ID  CK+G +++A         + LV    T   +++ LC   +
Sbjct: 628 MGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHR 687

Query: 312 MDKAHDLFLDMEENAVAP 329
           + +A  +   M +N + P
Sbjct: 688 LSEAVVIINLMVQNGIVP 705



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 191/396 (48%), Gaps = 38/396 (9%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVV--TYNSLIHGLCHANDWNEAKRLFF 75
           TY  +I+ L   G  +  + +  +M+ +N++  ++   Y  ++          EA  +F 
Sbjct: 42  TYKCMIEKLGLHGKFEAMEDVLAEMR-KNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFE 100

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
            M     +PSV ++N IM+ L + G   +A ++   M    + P+ +T++  M  FC+TG
Sbjct: 101 RMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITG 160

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           +   A  L  +M   GC+ + VSY  +I+G+ K     EA  L+ EM+ +GI P ++T+N
Sbjct: 161 RPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFN 220

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL--- 252
            L   L +   V+ + KLF ++ +  V  +  T+N FI GLC+ G I EA  L  ++   
Sbjct: 221 KLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSE 280

Query: 253 --------------GILKCELDIQA------------------YNCLIDGLCKSGRLEIA 280
                         G  K    ++A                  YN +I+G CK+G ++ A
Sbjct: 281 GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNA 340

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            ++ R    +  + D  TY+ +I+GLCNDG M++A  +F +  E     ++I++ TL+ G
Sbjct: 341 DKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKG 400

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +     + ++L+  M E    PD    ++VV+ L
Sbjct: 401 LSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 119/233 (51%), Gaps = 3/233 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TYN +++GLCK G +  A  +      +   PD+ T+N+LI G C   + ++A 
Sbjct: 422 CSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAI 481

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   M+  G+ P V+T+N +++ LCK  K+D        M+++   PN  TY+ L++ F
Sbjct: 482 EILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESF 541

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++ A ELF  M++ G   D V+   LI G C N E+++A  L+   + K  K + 
Sbjct: 542 CKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFV-TIEKEYKFSY 600

Query: 192 VT--YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
            T  +N +         V  A KLF +M   D A D  TY   ID  CK G I
Sbjct: 601 STAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNI 653



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 125/248 (50%), Gaps = 3/248 (1%)

Query: 2   ANG--NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIH 59
           ANG  N  I   C P+  T+NT+IDG CK+  +DKA  +   M    I PDV+TYN+L++
Sbjct: 445 ANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLN 504

Query: 60  GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
           GLC A   +     F  M+++G  P+++T+N++++  CK+ K+ EA  L   M  R + P
Sbjct: 505 GLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP 564

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMES-MGCKHDDVSYNILINGYCKNKEVEEALSL 178
           +  T  TL+ G C  G++++A ELF ++E      +    +NI+IN +C    V  A  L
Sbjct: 565 DIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKL 624

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
           + +M      P   TY  +     +   ++ A     E     +    +T    ++ LC 
Sbjct: 625 FHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCV 684

Query: 239 NGYIVEAV 246
              + EAV
Sbjct: 685 THRLSEAV 692



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 91/204 (44%), Gaps = 2/204 (0%)

Query: 175 ALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTF 232
           AL ++ ++ ++ G K T+ TY  +   L    + E    +  EM+++ D       Y   
Sbjct: 23  ALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGI 82

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           +    + G + EAV +F  +    CE  +Q+YN +++ L + G    A +++  +    +
Sbjct: 83  MRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGI 142

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
             DV T+ I +   C  G+   A  L  +M       N + +  +I GF + N   +   
Sbjct: 143 YPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYH 202

Query: 353 LLHKMKEKKVMPDASIVSMVVDLL 376
           L  +M ++ + PD    + ++ +L
Sbjct: 203 LFDEMLKQGICPDILTFNKLIHVL 226



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 5/122 (4%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C P+  TY  +ID  CK G +D A    L+   + + P   T   +++ LC  +  +
Sbjct: 630 GSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLS 689

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  +   M+  G+ P  V  N I +    + K   A +++   + +      ++Y  L 
Sbjct: 690 EAVVIINLMVQNGIVPEEV--NSIFEA---DKKEVAAPKIVVEYLLKKSHITYYSYELLY 744

Query: 129 DG 130
           DG
Sbjct: 745 DG 746


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 125/364 (34%), Positives = 203/364 (55%), Gaps = 5/364 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TY  +++GLCK G VD AK LF ++      P  V +N+LIHG       ++AK +
Sbjct: 314 PDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPTSVIFNTLIHGFVTHGRLDDAKAV 369

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             +M+   G+ P V T+N ++    K G +  A  +L  M  +  +PN ++Y+ L+DGFC
Sbjct: 370 LSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFC 429

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GKI+ A  L   M + G K + V +N LI+ +CK   + EA+ ++REM  KG KP V 
Sbjct: 430 KLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 489

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N+L  GL E+ +++HAL L  +M  + V A+T TYNT I+   + G I EA +L   +
Sbjct: 490 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 549

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 LD   YN LI GLC++G ++ A  LF  + R  LV   ++ NI+I+GLC  G +
Sbjct: 550 VFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMV 609

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A +   +M      P+++ F +LI+G  R  +    + +  K++ + + PD    + +
Sbjct: 610 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTL 669

Query: 373 VDLL 376
           +  L
Sbjct: 670 MSWL 673



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 189/368 (51%), Gaps = 36/368 (9%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNE 69
           + KP +V +NT+I G    G +D AKA+   M     I PDV TYNSLI+G         
Sbjct: 342 IPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGL 401

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +  +M ++G +P+V ++ +++D  CK GK+DEA  LL+ M    ++PN   ++ L+ 
Sbjct: 402 ALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLIS 461

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            FC   +I  A E+F  M   GCK D  ++N LI+G C+  E++ AL L R+M+S+G+  
Sbjct: 462 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 521

Query: 190 TVVTYNTL---FL--------------------------------GLFEIHQVEHALKLF 214
             VTYNTL   FL                                GL    +V+ A  LF
Sbjct: 522 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLF 581

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           E+M RD +   + + N  I+GLC++G + EAVE  + + +     DI  +N LI+GLC++
Sbjct: 582 EKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 641

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           GR+E  L +FR L    +  D VTYN ++  LC  G +  A  L  +  E+   PN   +
Sbjct: 642 GRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTW 701

Query: 335 VTLIHGFV 342
             L+   V
Sbjct: 702 SILLQSLV 709



 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 118/356 (33%), Positives = 183/356 (51%), Gaps = 5/356 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN+V Y T+I  L K   V++A  L  +M      PD  T+N +I GLC  +  NEA 
Sbjct: 242 CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAA 301

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++   M+ +G  P  +T+  +M+ LCK G++D A  L      R  +P +  ++TL+ GF
Sbjct: 302 KMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLF----YRIPKPTSVIFNTLIHGF 357

Query: 132 CLTGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
              G+++ A+ +   M  S G   D  +YN LI GY K   V  AL + R+M +KG KP 
Sbjct: 358 VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPN 417

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V +Y  L  G  ++ +++ A  L  EM  D +  +T  +N  I   CK   I EAVE+FR
Sbjct: 418 VYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 477

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C+ D+  +N LI GLC+   ++ AL L R +    +VA+ VTYN +I+     G
Sbjct: 478 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 537

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           ++ +A  L  +M       + I + +LI G  R  +  K   L  KM    ++P +
Sbjct: 538 EIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSS 593



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 158/303 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN  +Y  ++DG CK G +D+A  L  +M  + + P+ V +N LI   C  +   EA 
Sbjct: 414 CKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 473

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F EM  +G +P V TFN ++  LC+  ++  A  LL  M+   V  N  TY+TL++ F
Sbjct: 474 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 533

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+I  A +L   M   G   D+++YN LI G C+  EV++A SL+ +M+  G+ P+ 
Sbjct: 534 LRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSS 593

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++ N L  GL     VE A++  +EM       D  T+N+ I+GLC+ G I + + +FR 
Sbjct: 594 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 653

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L       D   YN L+  LCK G +  A  L         V +  T++I++  L     
Sbjct: 654 LQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQET 713

Query: 312 MDK 314
           +D+
Sbjct: 714 LDR 716



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 172/343 (50%), Gaps = 12/343 (3%)

Query: 28  KEGFVDKAKALFLQMKG-ENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           K GF  +   L L+M+   +  P   +YN ++  L   N    A  +F++M+ + + P++
Sbjct: 152 KAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTL 211

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
            TF V+M  LC   ++D A  +L  M +    PN+  Y TL+       ++N A +L   
Sbjct: 212 FTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEE 271

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M  MGC  D  ++N +I G CK   + EA  +   M+ +G  P  +TY  L  GL +I +
Sbjct: 272 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGR 331

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA----VELFRTLGILKCELDIQ 262
           V+ A  LF  + +      +  +NT I G   +G + +A     ++  + GI+    D+ 
Sbjct: 332 VDAAKDLFYRIPK----PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP---DVC 384

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
            YN LI G  K G + +ALE+ R +  +    +V +Y I++ G C  G++D+A++L  +M
Sbjct: 385 TYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEM 444

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             + + PN + F  LI  F + ++  + +E+  +M  K   PD
Sbjct: 445 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 487



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 98/213 (46%), Gaps = 6/213 (2%)

Query: 167 CKNKEVEEALSLYREMVS-----KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           CK  E+   +S   E+ S     KG + +   Y  L   L    + +   +L  +M+ + 
Sbjct: 76  CKLLELPLDVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEG 135

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTL-GILKCELDIQAYNCLIDGLCKSGRLEIA 280
           +    S + + +    K G+  +   L   +  +  CE   ++YN +++ L      ++A
Sbjct: 136 IVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVA 195

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
             +F  +  R +   + T+ +++  LC   ++D A  +  DM ++   PN +I+ TLIH 
Sbjct: 196 ANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHS 255

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
             + N+ ++ ++LL +M     +PDA   + V+
Sbjct: 256 LSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI 288


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 116/358 (32%), Positives = 203/358 (56%), Gaps = 3/358 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN+VT+N +++G  K+G     + L   M    I P+VV+YN L+ GLC    W+EA+
Sbjct: 6   CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAE 65

Query: 72  RLFFEMMDQGVQ--PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
            L  +M+ +G +  P +VT++ ++   CK GK++E+  LL  ++ R +RP+A  Y+ +M 
Sbjct: 66  ELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMA 125

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             C + ++  A EL   M   GC    +++N LI+G C+ K +E A SL + M + G+K 
Sbjct: 126 SLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKA 185

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VVTYNTL  GL +  +++ A +L E M+    A D   Y++F+ GLCK+G ++ A ++ 
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVL 245

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA-DVVTYNIMIHGLCN 308
             +     + ++  YN ++DGLCKSG+++ ALE+   +        +VV Y+ ++ GLC 
Sbjct: 246 EQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCK 305

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            G+  +A  +   M      P+V+ + +L++G  +  K  + +E + +M  +   P+A
Sbjct: 306 LGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNA 363



 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 196/369 (53%), Gaps = 6/369 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY+T++ G CK G V++++ L  ++    + PD + Y  ++  LC +    EA  L
Sbjct: 80  PDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALEL 139

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+  G  P+++TFN ++   C+   ++ A  LL  M    V+ +  TY+TLMDG C 
Sbjct: 140 LEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCK 199

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  AE+L   M++ GC  D V+Y+  + G CK+ +V  A  +  +M      P VVT
Sbjct: 200 AGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVT 259

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDD-VAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           YNT+  GL +  +++ AL++ E+M   D    +   Y+T +DGLCK G   EA  +   +
Sbjct: 260 YNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAM 319

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D+  Y+ L++GLCK+G++E A+E  R +       + VTY  ++HGLC+ G++
Sbjct: 320 ARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRL 379

Query: 313 DKAHDLFLDM-----EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            +A  +  +M       +   P+V  +  LI G  +  +    ++   +M+ +   PD  
Sbjct: 380 AEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGV 439

Query: 368 IVSMVVDLL 376
             S +V+ L
Sbjct: 440 SYSTIVEGL 448



 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 105/270 (38%), Positives = 157/270 (58%), Gaps = 6/270 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + VTYNT++DGLCK G + +A+ L  +MK     PDVV Y+S ++GLC +     A +
Sbjct: 184 KADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQ 243

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-VRPNAFTYSTLMDGF 131
           +  +M D    P+VVT+N I+D LCK+GK+D A  +++ M   D    N   YST++DG 
Sbjct: 244 VLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGL 303

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+   A  +  +M   GC+ D V+Y+ L+NG CK  ++EEA+   REM  +G KP  
Sbjct: 304 CKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNA 363

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEM-----QRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           VTY +L  GL    ++  A ++ EEM       D      STYN  I GLCK G I +A+
Sbjct: 364 VTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDAL 423

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           + F+ +    C+ D  +Y+ +++GL +SGR
Sbjct: 424 KFFQRMRSQGCDPDGVSYSTIVEGLARSGR 453



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 108/310 (34%), Positives = 170/310 (54%), Gaps = 6/310 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  +T+NT+I G C+E  ++ A +L   M    +  DVVTYN+L+ GLC A    EA+
Sbjct: 148 CCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAE 207

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M   G  P VV ++  +  LCK+GK+  A ++L+ M   D  PN  TY+T++DG 
Sbjct: 208 QLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGL 267

Query: 132 CLTGKINRAEELFGSMESM-GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           C +GKI+ A E+   M S  GC  + V Y+ +++G CK    +EA S+   M   G +P 
Sbjct: 268 CKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPD 327

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY++L  GL +  ++E A++   EM  +    +  TY + + GLC  G + EA  +  
Sbjct: 328 VVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVE 387

Query: 251 TLGILK-----CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            +         C   +  YN LI GLCK+GR++ AL+ F+ +  +    D V+Y+ ++ G
Sbjct: 388 EMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEG 447

Query: 306 LCNDGQMDKA 315
           L   G+  +A
Sbjct: 448 LARSGRALQA 457



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 169/338 (50%), Gaps = 39/338 (11%)

Query: 78  MDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           MD+ G  P+ VTFN +++   K G+  +  RLL+ M  R ++PN  +Y+ L++G C   +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 137 INRAEELFGSMESMGCKH--DDVSYNILINGYCKNKEVEEALSLYREMVSKGIK------ 188
            + AEEL   M S G +   D V+Y+ L++GYCK  +VEE+  L +E++S+G++      
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 189 -----------------------------PTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
                                        PT++T+NTL  G      +E A  L + M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
             V AD  TYNT +DGLCK G + EA +L   +    C  D+ AY+  + GLCKSG++  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM-EENAVAPNVIIFVTLI 338
           A ++   +       +VVTYN ++ GLC  G++D A ++   M   +    NV+ + T++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            G  ++ +  +   ++  M      PD    S +V+ L
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGL 338



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 98/180 (54%), Gaps = 10/180 (5%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           MA+ +G     C  N V Y+T++DGLCK G   +A+++   M      PDVVTY+SL++G
Sbjct: 283 MASSDG-----CGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNG 337

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR-- 118
           LC A    EA     EM  +G +P+ VT+  ++  LC  G++ EA R+++ M        
Sbjct: 338 LCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGD 397

Query: 119 ---PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
              P+  TY+ L+ G C  G+I+ A + F  M S GC  D VSY+ ++ G  ++    +A
Sbjct: 398 HCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457


>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 393

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 125/346 (36%), Positives = 195/346 (56%), Gaps = 14/346 (4%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH------ 63
           ++ KP+ V YNTIID LCK+  V     L+ +M  + I PDVVTYN+LI+ L +      
Sbjct: 33  LLVKPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKI 92

Query: 64  --------ANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
                        EA  L  +M  + V P++ TF  ++D LCK+G++ +A  +L +M+++
Sbjct: 93  RKEYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQ 152

Query: 116 DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
            V PN  TY++LMDG+ L  ++N+A++LF ++   G   +  SY ++ING CKNK V+EA
Sbjct: 153 RVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEA 212

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
            +L++EM SK + P  V YN+L  GL +  ++        EM      A+  TYN+ +DG
Sbjct: 213 ANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDG 272

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           LCKN  + +A+ L   +       +I  Y  L+DGLCK+GRL  A E+++ L  +    D
Sbjct: 273 LCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLD 332

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
              Y +MI+GLC +G +D+A  L   ME+N   P+ + +   I   
Sbjct: 333 ARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRAL 378



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 156/266 (58%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T+ T++DGLCK+G V KA+ +   M  + + P++VTYNSL+ G     + N+AK+L
Sbjct: 121 PNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQL 180

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  +  +G+ P+V ++ V+++ LCKN  +DEA+ L   M  +++ P+   Y++L+DG C 
Sbjct: 181 FNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCK 240

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           + +I    +  G M   G   + ++YN L++G CKN +V++A++L  ++ ++GI+P + T
Sbjct: 241 SRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYT 300

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +  ++  A ++++++       D   Y   I+GLCK G++ EA+ L   + 
Sbjct: 301 YTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKME 360

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEI 279
             KC  D   Y   I  L +S R EI
Sbjct: 361 DNKCTPDGVTYEITIRALFESDRNEI 386



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 157/307 (51%), Gaps = 14/307 (4%)

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD------------ 129
           V+P VV +N I+D LCK+  + +   L   M+ + + P+  TY+TL+             
Sbjct: 35  VKPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRK 94

Query: 130 --GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
             GF + G++  A  L   M S     +  ++  L++G CK+ EV++A ++   M+ + +
Sbjct: 95  EYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRV 154

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P +VTYN+L  G F + +V  A +LF  +    +  +  +Y   I+GLCKN  + EA  
Sbjct: 155 EPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAAN 214

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           LF+ +       D  AYN LIDGLCKS R+    +    +  R   A+++TYN ++ GLC
Sbjct: 215 LFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLC 274

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            + Q+DKA  L   ++   + PN+  +  L+ G  +  +     E+   +  K    DA 
Sbjct: 275 KNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDAR 334

Query: 368 IVSMVVD 374
           I +++++
Sbjct: 335 IYTVMIN 341



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 123/306 (40%), Gaps = 94/306 (30%)

Query: 163 INGYCKNKEVEEAL---------------------------------------------S 177
           + G C N EV +AL                                              
Sbjct: 1   MKGLCLNGEVRKALYFHDHVIAKGFHLNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCD 60

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFE--------------IHQVEHALKLFEEMQRDDVA 223
           LY EM+ K I P VVTYNTL   L                + Q++ A+ L  +M    V 
Sbjct: 61  LYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVT 120

Query: 224 ADTSTYNTFIDGLCKNG-------------------------------YIVEAV----EL 248
            +  T+ T +DGLCK+G                               ++V+ V    +L
Sbjct: 121 PNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQL 180

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F T+ +     ++++Y  +I+GLCK+  ++ A  LF+ +  + +V D V YN +I GLC 
Sbjct: 181 FNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCK 240

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
             ++    D   +M +     N+I + +L+ G  + ++  K I LL K+K + + P+   
Sbjct: 241 SRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYT 300

Query: 369 VSMVVD 374
            +++VD
Sbjct: 301 YTILVD 306


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  229 bits (584), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 127/355 (35%), Positives = 193/355 (54%), Gaps = 1/355 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNTVTYNT+I  LCKE  ++ A  L   +  + + PDV T+N+LI GLC + + + A 
Sbjct: 329 CSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAM 388

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F EM ++G +P   T+++++D LC   ++ EA  LL  M       NA  Y+TL+DG 
Sbjct: 389 EMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGL 448

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C + +I  AEE+F  ME +G     V+YN LI+G CKNK VEEA  L  +M+ +G+KP  
Sbjct: 449 CKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDK 508

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN+L      +  +E A  + + M  +    D  TY T I GLC+ G +  A +L R+
Sbjct: 509 FTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRS 568

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN-DG 310
           + +    L   AYN +I  L    R +  + LFR +  +    D +T+ I+  GLCN  G
Sbjct: 569 VQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGG 628

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            + +A D  ++M E  + P    F  L  G   ++    +IEL++ + EK  M +
Sbjct: 629 PIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSE 683



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 120/356 (33%), Positives = 192/356 (53%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G  C    V+   +++G CKEG V++A    L++  E  +PD VT+NSL++G C   + 
Sbjct: 220 LGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNV 279

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           N+A  +   M+++G  P V T+N ++  +CK G+ ++A  +L  M+ R+  PN  TY+TL
Sbjct: 280 NDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTL 339

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +   C   +I  A +L   + S G   D  ++N LI G C +K  + A+ ++ EM +KG 
Sbjct: 340 ISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGC 399

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP   TY+ L   L    +++ AL L +EM+    A +   YNT IDGLCK+  I +A E
Sbjct: 400 KPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEE 459

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +F  + +L        YN LIDGLCK+ R+E A +L   +    L  D  TYN ++   C
Sbjct: 460 IFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFC 519

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
             G ++KA D+   M  N   P++  + TLI G  R  +     +LL  ++ K ++
Sbjct: 520 RVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIV 575



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 118/353 (33%), Positives = 192/353 (54%), Gaps = 1/353 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN++I G+CK G  +KA  +  QM     +P+ VTYN+LI  LC  N+   A  L
Sbjct: 296 PDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDL 355

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              ++ +G+ P V TFN ++  LC +   D A  + + M  +  +P+ FTYS L+D  C 
Sbjct: 356 ARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCY 415

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++  A  L   MES GC  + V YN LI+G CK++ +E+A  ++ +M   G+  + VT
Sbjct: 416 ERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVT 475

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL +  +VE A +L ++M  + +  D  TYN+ +   C+ G I +A ++ +T+ 
Sbjct: 476 YNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMA 535

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              CE DI  Y  LI GLC++GR+++A +L RS+  + +V     YN +I  L    +  
Sbjct: 536 SNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTK 595

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP-SKVIELLHKMKEKKVMPD 365
           +   LF +M E +  P+ +    +  G      P  + I+   +M EK ++P+
Sbjct: 596 EGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPE 648



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 198/353 (56%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+N++++G C+ G V+ A  +   M  +  +PDV TYNSLI G+C   ++ +A  +
Sbjct: 261 PDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEI 320

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+ +   P+ VT+N ++  LCK  +++ A+ L  ++V + + P+  T++TL+ G CL
Sbjct: 321 LQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCL 380

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +   + A E+F  M++ GCK D+ +Y+ILI+  C  + ++EAL L +EM S G     V 
Sbjct: 381 SKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVV 440

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL +  ++E A ++F++M+   V+  + TYNT IDGLCKN  + EA +L   + 
Sbjct: 441 YNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMI 500

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   + D   YN L+   C+ G +E A ++ +++       D+ TY  +I GLC  G++D
Sbjct: 501 MEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVD 560

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            A  L   ++   +      +  +I       +  + + L  +M EK   PDA
Sbjct: 561 VASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDA 613



 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 187/353 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ +T+ T++ G  +EG ++ A  +  QM G       V+   L++G C      EA R
Sbjct: 190 KPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALR 249

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              E+ ++G  P  VTFN +++  C+ G +++A  ++D M+++   P+ +TY++L+ G C
Sbjct: 250 FVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMC 309

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+  +A E+   M    C  + V+YN LI+  CK  E+E A  L R +VSKG+ P V 
Sbjct: 310 KLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVC 369

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL  GL      + A+++FEEM+      D  TY+  ID LC    + EA+ L + +
Sbjct: 370 TFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEM 429

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  +   YN LIDGLCKS R+E A E+F  +    +    VTYN +I GLC + ++
Sbjct: 430 ESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRV 489

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++A  L   M    + P+   + +L+  F R+    K  +++  M      PD
Sbjct: 490 EEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPD 542



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 178/361 (49%), Gaps = 2/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T+ T+I       F +    L +        PD   YN  ++ L   N     + L
Sbjct: 88  PNATTFATLIQSFTN--FHEIENLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEML 145

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+++G+   V TFNV++  LCK  ++  A  +L+ M    ++P+  T++TLM GF  
Sbjct: 146 HSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIE 205

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +N A ++   M   GC   +VS  +L+NG+CK   VEEAL    E+  +G  P  VT
Sbjct: 206 EGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVT 265

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N+L  G   I  V  AL + + M       D  TYN+ I G+CK G   +A+E+ + + 
Sbjct: 266 FNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMI 325

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           + +C  +   YN LI  LCK   +E A +L R L  + L+ DV T+N +I GLC     D
Sbjct: 326 LRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQD 385

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A ++F +M+     P+   +  LI       +  + + LL +M+      +A + + ++
Sbjct: 386 IAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLI 445

Query: 374 D 374
           D
Sbjct: 446 D 446



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 181/349 (51%), Gaps = 6/349 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+T  YN  ++ L ++  +   + L  +M  E I  DV T+N LI  LC A+    A  
Sbjct: 120 KPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAIL 179

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM + G++P  +TF  +M    + G ++ A ++   M+         +   L++GFC
Sbjct: 180 MLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFC 239

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A      +   G   D V++N L+NG+C+   V +AL +   M+ KG  P V 
Sbjct: 240 KEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVY 299

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  G+ ++ + E A+++ ++M   + + +T TYNT I  LCK   I  A +L R L
Sbjct: 300 TYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARIL 359

Query: 253 ---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
              G+L    D+  +N LI GLC S   +IA+E+F  +  +    D  TY+I+I  LC +
Sbjct: 360 VSKGLLP---DVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYE 416

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
            ++ +A  L  +ME +  A N +++ TLI G  +  +     E+  +M+
Sbjct: 417 RRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQME 465



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 182/348 (52%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T+N +I  LCK   +  A  +  +M    + PD +T+ +L+ G     D N A ++  +M
Sbjct: 160 TFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQM 219

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +  G   + V+  V+++  CK G+++EA R +  + +    P+  T+++L++GFC  G +
Sbjct: 220 LGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNV 279

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           N A ++   M   G   D  +YN LI+G CK  E E+A+ + ++M+ +   P  VTYNTL
Sbjct: 280 NDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTL 339

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
              L + +++E A  L   +    +  D  T+NT I GLC +     A+E+F  +    C
Sbjct: 340 ISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGC 399

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           + D   Y+ LID LC   RL+ AL L + +       + V YN +I GLC   +++ A +
Sbjct: 400 KPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEE 459

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +F  ME   V+ + + + TLI G  +  +  +  +L+ +M  + + PD
Sbjct: 460 IFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPD 507



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 140/283 (49%), Gaps = 4/283 (1%)

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES-MGCK 153
           +L ++   D  + LL  +      PNA T++TL+  F      +  E L   +E+ +G K
Sbjct: 64  QLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFT---NFHEIENLLKILENELGFK 120

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            D   YNI +N   ++ +++    L+ +MV++GI   V T+N L   L + HQ+  A+ +
Sbjct: 121 PDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILM 180

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
            EEM    +  D  T+ T + G  + G +  A+++ + +    C L   +   L++G CK
Sbjct: 181 LEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCK 240

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
            GR+E AL     +       D VT+N +++G C  G ++ A D+   M E    P+V  
Sbjct: 241 EGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYT 300

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + +LI G  ++ +  K IE+L +M  ++  P+    + ++  L
Sbjct: 301 YNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISAL 343


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 206/358 (57%), Gaps = 3/358 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN+VT+N +++G  K+G     + L   M   +I P+VV+YN L+ GLC    W+EA+
Sbjct: 6   CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAE 65

Query: 72  RLFFEMMDQGVQ--PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
            L  +M+ +G +  P +VT++ ++   CK GK++E+  LL  ++ R +RP+A  Y+ ++ 
Sbjct: 66  ELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVA 125

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             C + ++  A EL   M   GC    +++N LI+G C+ K +E A SL ++M + G+K 
Sbjct: 126 SLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKA 185

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VVTYNTL  GL +  +++ A +L E M+    A D   Y++F+ GLCK+G +++A ++ 
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVL 245

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA-DVVTYNIMIHGLCN 308
             +     + ++  YN ++DGLCKSG+++ ALE+   +        +VV Y+ ++ GLC 
Sbjct: 246 EQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCK 305

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            G+  +A  +   M      P+V+ + +L++G  +  K  + +E + +M  +   P+A
Sbjct: 306 LGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNA 363



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 197/369 (53%), Gaps = 6/369 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY+T++ G CK G V++++ L  ++    + PD + Y  ++  LC +    EA  L
Sbjct: 80  PDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALEL 139

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+  G  P+++TFN ++   C+   ++ A  LL  M    V+ +  TY+TLMDG C 
Sbjct: 140 LEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCK 199

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  AE+L   M++ GC  D V+Y+  + G CK+ +V +A  +  +M      P VVT
Sbjct: 200 AGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVT 259

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDD-VAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           YNT+  GL +  +++ AL++ E+M   D    +   Y+T +DGLCK G   EA  +   +
Sbjct: 260 YNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAM 319

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D+  Y+ L++GLCK+G++E A+E  R +       + VTY  ++HGLC+ G++
Sbjct: 320 ARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRL 379

Query: 313 DKAHDLFLDM-----EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            +A  +  +M       +   P+V  +  LI G  +  +    ++   +M+ +   PD  
Sbjct: 380 AEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGV 439

Query: 368 IVSMVVDLL 376
             S +V+ L
Sbjct: 440 SYSTIVEGL 448



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 107/311 (34%), Positives = 171/311 (54%), Gaps = 6/311 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  +T+NT+I G C+E  ++ A +L  +M    +  DVVTYN+L+ GLC A    EA+
Sbjct: 148 CCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAE 207

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M   G  P VV ++  +  LCK+GK+ +A ++L+ M      PN  TY+T++DG 
Sbjct: 208 QLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGL 267

Query: 132 CLTGKINRAEELFGSMESM-GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           C +GKI+ A E+   M S  GC  + V Y+ +++G CK    +EA S+   M   G +P 
Sbjct: 268 CKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPD 327

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY++L  GL +  ++E A++   EM  +    +  TY + + GLC  G + EA  +  
Sbjct: 328 VVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVE 387

Query: 251 TLGILK-----CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            +         C   +  YN LI GLCK+GR++ AL+ F+ +  +    D V+Y+ ++ G
Sbjct: 388 EMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEG 447

Query: 306 LCNDGQMDKAH 316
           L   G+  +A 
Sbjct: 448 LARSGRALQAE 458



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 171/338 (50%), Gaps = 39/338 (11%)

Query: 78  MDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           MD+ G  P+ VTFN +++   K G+  +  RLL+ M  RD++PN  +Y+ L++G C   +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 137 INRAEELFGSMESMGCKH--DDVSYNILINGYCKNKEVEEALSLYREMVSKGIK------ 188
            + AEEL   M S G +   D V+Y+ L++GYCK  +VEE+  L +E++S+G++      
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 189 -----------------------------PTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
                                        PT++T+NTL  G      +E A  L ++M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
             V AD  TYNT +DGLCK G + EA +L   +    C  D+ AY+  + GLCKSG++  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM-EENAVAPNVIIFVTLI 338
           A ++   +       +VVTYN ++ GLC  G++D A ++   M   +    NV+ + T++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            G  ++ +  +   ++  M      PD    S +V+ L
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGL 338



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 115/211 (54%), Gaps = 6/211 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           PN VTYNTI+DGLCK G +D A  +  QM   +    +VV Y++++ GLC      EA+ 
Sbjct: 255 PNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARS 314

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M   G +P VVT++ +++ LCK GK++EA   +  M     +PNA TY +L+ G C
Sbjct: 315 VMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLC 374

Query: 133 LTGKINRAEELFGSMESMG-----CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
             G++  AE +   M S G     C     +YN LI G CK   +++AL  ++ M S+G 
Sbjct: 375 SCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGC 434

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
            P  V+Y+T+  GL    +   A  +  E++
Sbjct: 435 DPDGVSYSTIVEGLARSGRALQAEMILSEVR 465



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 98/180 (54%), Gaps = 10/180 (5%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           MA+ +G     C  N V Y+T++DGLCK G   +A+++   M      PDVVTY+SL++G
Sbjct: 283 MASSDG-----CGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNG 337

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR-- 118
           LC A    EA     EM  +G +P+ VT+  ++  LC  G++ EA R+++ M        
Sbjct: 338 LCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGH 397

Query: 119 ---PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
              P+  TY+ L+ G C  G+I+ A + F  M S GC  D VSY+ ++ G  ++    +A
Sbjct: 398 HCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 118/346 (34%), Positives = 182/346 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ VTYN +I+ +C EG VD+A  +   +      PD VTY  ++  LC +  W E +
Sbjct: 228 CEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVE 287

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM      P  VTFN I+  LC+ G +D A +++D M +    P+  TYS+++DG 
Sbjct: 288 ELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGL 347

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A EL   ++S GCK D ++Y  ++ G C  ++ E A  L  EMV     P  
Sbjct: 348 CDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDE 407

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NT+   L +   V+ A+K+ E+M  +    D  TYN+ IDGLC    I +A+EL   
Sbjct: 408 VTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSN 467

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L    C+ DI  +N L+ GLC   R E A +L  ++       D  T+N +I  LC  G 
Sbjct: 468 LQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGL 527

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           + +A +    M EN   PN   +  ++   ++  K  + ++LL  M
Sbjct: 528 LLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGM 573



 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 188/365 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY+ ++D  CK     +A  L  +M+ +   PD+VTYN LI+ +C+  D +EA 
Sbjct: 193 CSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEAL 252

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  ++   G +P  VT+  ++  LC + +  E   L   M      P+  T++T++   
Sbjct: 253 NILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSL 312

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G ++RA ++   M   GC  D V+Y+ +++G C    V++A+ L   + S G KP  
Sbjct: 313 CQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDT 372

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           + Y T+  GL  I Q EHA +L  EM   D   D  T+NT I  LC+ G +  A+++   
Sbjct: 373 IAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQ 432

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  DI  YN +IDGLC    ++ A+EL  +L       D+VT+N ++ GLC+  +
Sbjct: 433 MSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDR 492

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            + A  L ++M  +   P+   F T+I    +     + IE L  M E   +P+ S  ++
Sbjct: 493 WEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNI 552

Query: 372 VVDLL 376
           VVD L
Sbjct: 553 VVDAL 557



 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 191/368 (51%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G+   P+T T+N +I  LC  G V  A A+F  M     +P VVTY+ L+   C A+ + 
Sbjct: 155 GMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYR 214

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  L  EM  +G +P +VT+NV+++ +C  G +DEA  +L  +     +P+A TY+ ++
Sbjct: 215 QAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVL 274

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
              C + +    EELF  M S  C  D+V++N ++   C+   V+ A+ +   M   G  
Sbjct: 275 KSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCI 334

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P +VTY+++  GL ++ +V+ A++L   ++      DT  Y T + GLC       A EL
Sbjct: 335 PDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEEL 394

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +    C  D   +N +I  LC+ G ++ A+++   +       D+VTYN +I GLCN
Sbjct: 395 MAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCN 454

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           +  +D A +L  +++     P+++ F TL+ G   +++     +L+  M      PDA+ 
Sbjct: 455 ERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATT 514

Query: 369 VSMVVDLL 376
            + V+  L
Sbjct: 515 FNTVITSL 522



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 189/365 (51%), Gaps = 2/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY++I+DGLC  G VD A  L  ++K     PD + Y +++ GLC    W  A+
Sbjct: 333 CIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAE 392

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+     P  VTFN ++  LC+ G +D A ++++ M +    P+  TY++++DG 
Sbjct: 393 ELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGL 452

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    I+ A EL  +++S GCK D V++N L+ G C     E+A  L   M+     P  
Sbjct: 453 CNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDA 512

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+NT+   L +   +  A++  + M  +    + STYN  +D L K G   EA++L   
Sbjct: 513 TTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLS- 571

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
            G+     D+  YN +I  + K+G++E AL+L R +    L  D +TY  + +G+C +  
Sbjct: 572 -GMTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDG 630

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D+A  +   +++  ++P+   +  ++ GF +  +    I+    M     MPD S   +
Sbjct: 631 TDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYII 690

Query: 372 VVDLL 376
           +++ L
Sbjct: 691 LLEAL 695



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 178/349 (51%), Gaps = 3/349 (0%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTYNT+++G C+ G ++ A+ L   + G    PD  T+N LI  LC      +A  +F +
Sbjct: 131 VTYNTMVNGYCRAGRIEDARRL---ISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDD 187

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+ +G  PSVVT+++++D  CK     +A  LLD M  +   P+  TY+ L++  C  G 
Sbjct: 188 MLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGD 247

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           ++ A  +   + S GCK D V+Y  ++   C ++  +E   L+ EM S    P  VT+NT
Sbjct: 248 VDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNT 307

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +   L +   V+ A+K+ + M       D  TY++ +DGLC  G + +AVEL   L    
Sbjct: 308 IVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 367

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
           C+ D  AY  ++ GLC   + E A EL   +       D VT+N +I  LC  G +D+A 
Sbjct: 368 CKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAI 427

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +   M EN   P+++ + ++I G          +ELL  ++     PD
Sbjct: 428 KVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPD 476



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 167/311 (53%), Gaps = 2/311 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT+NT+I  LC++G VD+A  +  QM     NPD+VTYNS+I GLC+    ++A 
Sbjct: 403 CPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAM 462

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   +   G +P +VTFN ++  LC   + ++A +L+  M+  D  P+A T++T++   
Sbjct: 463 ELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSL 522

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + +A E    M   GC  +  +YNI+++   K  + +EAL L   M +    P +
Sbjct: 523 CQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDL 580

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYNT+   + +  ++E AL L   M  + ++ DT TY +   G+C+      A+ +   
Sbjct: 581 ITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCR 640

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L  +    D   YN ++ G C++ R +IA++ F  +     + D  TY I++  L  +  
Sbjct: 641 LQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECL 700

Query: 312 MDKAHDLFLDM 322
           +D+A  L +++
Sbjct: 701 LDEAKQLLVNL 711



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 170/358 (47%), Gaps = 35/358 (9%)

Query: 51  VVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL- 109
           VV  N LI  LC      +A+R+F  +   G   +VVT+N +++  C+ G++++A RL+ 
Sbjct: 98  VVPCNILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARRLIS 154

Query: 110 -------------------------------DLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
                                          D M+ R   P+  TYS L+D  C      
Sbjct: 155 GMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYR 214

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
           +A  L   M + GC+ D V+YN+LIN  C   +V+EAL++  ++ S G KP  VTY  + 
Sbjct: 215 QAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVL 274

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
             L    + +   +LF EM  +  A D  T+NT +  LC+ G +  A+++   +    C 
Sbjct: 275 KSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCI 334

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            DI  Y+ ++DGLC  GR++ A+EL   L       D + Y  ++ GLC+  Q + A +L
Sbjct: 335 PDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEEL 394

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +M  +   P+ + F T+I    +     + I+++ +M E    PD    + ++D L
Sbjct: 395 MAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGL 452



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 86/176 (48%), Gaps = 2/176 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TYN ++D L K G   +A  L   M   N  PD++TYN++I  +  A    EA 
Sbjct: 543 CIPNQSTYNIVVDALLKAGKTQEALKLLSGMT--NGTPDLITYNTVISNITKAGKMEEAL 600

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M+  G+ P  +T+  +   +C+    D A R+L  +    + P+A  Y+ ++ GF
Sbjct: 601 DLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGF 660

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           C   + + A + F  M S GC  D+ +Y IL+        ++EA  L   + S G+
Sbjct: 661 CQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGV 716



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 7/123 (5%)

Query: 253 GILKC-ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           G  KC  L +   N LI  LC  GR+  A  +F +L      A VVTYN M++G C  G+
Sbjct: 89  GSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATLGAS---ATVVTYNTMVNGYCRAGR 145

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           ++ A  L   M      P+   F  LI       +    + +   M  +   P     S+
Sbjct: 146 IEDARRLISGM---PFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSI 202

Query: 372 VVD 374
           ++D
Sbjct: 203 LLD 205


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 117/361 (32%), Positives = 198/361 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNTI+  LC  G + +A  +  +       PDV+TY  LI   C+ +   +A +L
Sbjct: 206 PDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKL 265

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G +P VVT+NV+++ +CK G++DEA + L+ M     +PN  T++ ++   C 
Sbjct: 266 LDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCS 325

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG+   AE L   M   GC    V++NILIN  C+ + +  A+ +  +M   G  P  ++
Sbjct: 326 TGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLS 385

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +  +++ A++  E M       D  TYNT +  LCK+G +  AVE+   L 
Sbjct: 386 YNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLS 445

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C   +  YN +IDGL K G+ E A+EL   + R+ L  D++TY+ ++ GL  +G++D
Sbjct: 446 SKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVD 505

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  +F DME  ++ P+ + +  ++ G  +  + S+ I+ L  M EK   P  +  ++++
Sbjct: 506 EAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILI 565

Query: 374 D 374
           +
Sbjct: 566 E 566



 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 186/352 (52%), Gaps = 3/352 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +   ++I G C+ G   KA  +   ++     PDV+TYN LI G C + + ++A  +
Sbjct: 139 PDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEV 198

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M    V P VVT+N I+  LC +GK+ EA  +LD  +QR+  P+  TY+ L++  C 
Sbjct: 199 LERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCN 255

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              + +A +L   M   GCK D V+YN+LING CK   ++EA+     M S G KP V+T
Sbjct: 256 DSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVIT 315

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N +   +    +   A +L  +M R   +    T+N  I+ LC+   +  A+++   + 
Sbjct: 316 HNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMP 375

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  +  +YN L+ G C+  +++ A+E    +  R    D+VTYN ++  LC DG++D
Sbjct: 376 KHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVD 435

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            A ++   +     +P +I + T+I G  ++ K    +ELL +M+ K + PD
Sbjct: 436 AAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPD 487



 Score =  213 bits (543), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 175/297 (58%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+ VTYN +I+G+CKEG +D+A      M      P+V+T+N ++  +C    W +A+
Sbjct: 274 CKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAE 333

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL  +M+ +G  PSVVTFN++++ LC+   +  A  +L+ M +    PN+ +Y+ L+ GF
Sbjct: 334 RLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGF 393

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++RA E    M S GC  D V+YN L+   CK+ +V+ A+ +  ++ SKG  P +
Sbjct: 394 CQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVL 453

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYNT+  GL ++ + E+A++L EEM+R  +  D  TY+T + GL + G + EA+++F  
Sbjct: 454 ITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHD 513

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           +  L  +     YN ++ GLCK+ +   A++    +  +       TY I+I G+ +
Sbjct: 514 MEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIAD 570



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 177/331 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY  +I+  C +  V +A  L  +M+ +   PDVVTYN LI+G+C     +EA 
Sbjct: 239 CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAI 298

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +    M   G +P+V+T N+I+  +C  G+  +A RLL  M+++   P+  T++ L++  
Sbjct: 299 KFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFL 358

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    + RA ++   M   GC  + +SYN L++G+C+ K+++ A+     MVS+G  P +
Sbjct: 359 CRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDI 418

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL   L +  +V+ A+++  ++     +    TYNT IDGL K G    AVEL   
Sbjct: 419 VTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEE 478

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DI  Y+ L+ GL + G+++ A+++F  +    +    VTYN ++ GLC   Q
Sbjct: 479 MRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQ 538

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
             +A D    M E    P    +  LI G  
Sbjct: 539 TSRAIDFLAYMVEKGCKPTEATYTILIEGIA 569



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 156/277 (56%), Gaps = 3/277 (1%)

Query: 90  NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
           N+ + +L +NG+++E  + L+ M+ +   P+    ++L+ GFC +GK  +A  +   +E+
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
            G   D ++YN+LI GYCK+ E+++AL +   M    + P VVTYNT+   L +  +++ 
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKE 226

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           A+++ +   + +   D  TY   I+  C +  + +A++L   +    C+ D+  YN LI+
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           G+CK GRL+ A++   ++P      +V+T+NI++  +C+ G+   A  L  DM     +P
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSP 346

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +V+ F  LI+   R     + I++L KM +   +P++
Sbjct: 347 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNS 383



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 157/308 (50%), Gaps = 3/308 (0%)

Query: 58  IHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV 117
           +  L    +  E  +    M+ QG  P V+    ++   C++GK  +A+R+++++     
Sbjct: 113 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGA 172

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
            P+  TY+ L+ G+C +G+I++A E+   +E M    D V+YN ++   C + +++EA+ 
Sbjct: 173 VPDVITYNVLIGGYCKSGEIDKALEV---LERMSVAPDVVTYNTILRSLCDSGKLKEAME 229

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           +    + +   P V+TY  L         V  A+KL +EM++     D  TYN  I+G+C
Sbjct: 230 VLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 289

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           K G + EA++    +    C+ ++  +N ++  +C +GR   A  L   + R+     VV
Sbjct: 290 KEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVV 349

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           T+NI+I+ LC    + +A D+   M ++   PN + +  L+HGF +  K  + IE L  M
Sbjct: 350 TFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIM 409

Query: 358 KEKKVMPD 365
             +   PD
Sbjct: 410 VSRGCYPD 417



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 3/211 (1%)

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           ++ + NI +    +N E+EE L     M+ +G  P V+   +L  G     + + A ++ 
Sbjct: 105 EEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIM 164

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           E ++      D  TYN  I G CK+G I +A+E+   + +     D+  YN ++  LC S
Sbjct: 165 EILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVAP---DVVTYNTILRSLCDS 221

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G+L+ A+E+     +R    DV+TY I+I   CND  + +A  L  +M +    P+V+ +
Sbjct: 222 GKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY 281

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             LI+G  +  +  + I+ L+ M      P+
Sbjct: 282 NVLINGICKEGRLDEAIKFLNNMPSYGCKPN 312



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 111/222 (50%), Gaps = 3/222 (1%)

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D ++   LI G+C++ + ++A  +   + + G  P V+TYN L  G  +  +++ AL++ 
Sbjct: 140 DVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVL 199

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           E M    VA D  TYNT +  LC +G + EA+E+       +C  D+  Y  LI+  C  
Sbjct: 200 ERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCND 256

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
             +  A++L   + ++    DVVTYN++I+G+C +G++D+A     +M      PNVI  
Sbjct: 257 SGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITH 316

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             ++       +      LL  M  K   P     +++++ L
Sbjct: 317 NIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFL 358



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 26/53 (49%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGL 61
           G+  KP+ VTYN I+ GLCK     +A      M  +   P   TY  LI G+
Sbjct: 516 GLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 112/265 (42%), Positives = 170/265 (64%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V YNTIIDGLCK+  V +A  +F ++KG+ + PDV TY+ L+HGLC+++   EA  
Sbjct: 221 RPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASA 280

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EMM   + P VVTFN+++D+LCK G + EA  ++ +M+++ V PN  TY++LM+G+C
Sbjct: 281 LFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYC 340

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L  K+  A  +F +M + GC  + VSYNILINGYCK + ++EA  L+ EM  +G+ P   
Sbjct: 341 LQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTF 400

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YNTL  GL +  +   A +LF++MQ    + D  T    +D LCK GY+  A+ LFR +
Sbjct: 401 NYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAM 460

Query: 253 GILKCELDIQAYNCLIDGLCKSGRL 277
                + ++  Y+ LI  + KSG++
Sbjct: 461 QDSCLKPNLVTYDILIRAMYKSGKI 485



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/334 (33%), Positives = 176/334 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT++++I+GLC E    +A   F +M      P++ TYN++I G C       A  
Sbjct: 151 EPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVG 210

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M   G +P +V +N I+D LCK+  + EA  +   +  + VRP+ FTYS LM G C
Sbjct: 211 LLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLC 270

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            + +   A  LF  M S+    D V++NIL++  CK   + EA  + + M+ KG++P   
Sbjct: 271 NSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYA 330

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  G    ++V  A  +F+ M       +  +YN  I+G CK   I EA ELF  +
Sbjct: 331 TYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEM 390

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +   YN LI GLC++GR   A ELF+ +  +    D+VT  I++  LC  G +
Sbjct: 391 SFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYL 450

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           D A  LF  M+++ + PN++ +  LI    +  K
Sbjct: 451 DNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGK 484



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 186/347 (53%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           +N +I+   +   VD A ++  ++      PD VT++SLI+GLC  + +  A   F EM+
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
             G QP++ T+N I+   CK GK   A  LL  M +   RP+   Y+T++DG C    ++
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVS 241

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A ++F  ++  G + D  +Y+IL++G C + + EEA +L+ EM+S  I P VVT+N L 
Sbjct: 242 EALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILV 301

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
             L +   +  A  + + M    V  + +TYN+ ++G C    + EA  +F  +    C 
Sbjct: 302 DKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCM 361

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            ++ +YN LI+G CK+ R++ A ELF  +  R L+ +   YN +I GLC  G+  +A +L
Sbjct: 362 PNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAREL 421

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           F DM+    +P+++    L+    ++      + L   M++  + P+
Sbjct: 422 FKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPN 468



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 185/363 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  V ++ ++  L +        +L  +++   I  DV  +N LI+        + A  +
Sbjct: 82  PCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSV 141

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G +P  VTF+ +++ LC   K   A    D MV    +PN  TY+T++ GFC 
Sbjct: 142 LGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCK 201

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK   A  L   M+  G + D V YN +I+G CK++ V EAL ++ E+  KG++P V T
Sbjct: 202 IGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFT 261

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  GL    Q E A  LF EM   ++  D  T+N  +D LCK G + EA  + + + 
Sbjct: 262 YSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMI 321

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E +   YN L++G C   ++  A  +F ++  +  + +VV+YNI+I+G C   ++D
Sbjct: 322 EKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRID 381

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A +LF +M    + PN   + TLI G  +  +  +  EL   M+ +   PD    ++++
Sbjct: 382 EARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILL 441

Query: 374 DLL 376
           D L
Sbjct: 442 DSL 444



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 53/128 (41%), Positives = 74/128 (57%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN V+YN +I+G CK   +D+A+ LF +M    + P+   YN+LI GLC A    EA+
Sbjct: 360 CMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAR 419

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF +M  QG  P +VT  +++D LCK G +D A RL   M    ++PN  TY  L+   
Sbjct: 420 ELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAM 479

Query: 132 CLTGKINR 139
             +GKI R
Sbjct: 480 YKSGKIYR 487


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 116/346 (33%), Positives = 180/346 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ VTYN +I+ +C EG VD+A  +   +      PD VTY  ++  LC +  W E +
Sbjct: 317 CEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVE 376

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM      P  VTFN I+  LC+ G +D A  ++D M +     +  TYS+++DG 
Sbjct: 377 ELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGL 436

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A EL   ++S GCK D ++Y  ++ G C  ++ E A  L  EM+     P  
Sbjct: 437 CDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDE 496

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NT+   L +   V+ A+++ E+M  +  + D  TYN  IDGLC    I +A+EL   
Sbjct: 497 VTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSD 556

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L    C+ DI  +N L+ GLC   R E A +L  ++ R     D +T+N +I  LC  G 
Sbjct: 557 LQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGL 616

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           + +A +    M EN   PN   +  ++   ++  K    +ELL  M
Sbjct: 617 LTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM 662



 Score =  228 bits (580), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 189/365 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY+ ++D  CKE    +A AL  +M+ +   PD+VTYN LI+ +C+  D +EA 
Sbjct: 282 CSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEAL 341

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   +   G +P  VT+  ++  LC + +  E   LL  M   +  P+  T++T++   
Sbjct: 342 NILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSL 401

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G ++RA E+   M   GC  D V+Y+ +++G C    V++A+ L   + S G KP  
Sbjct: 402 CQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDT 461

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           + Y T+  GL    Q E A +L  EM   D   D  T+NT +  LC+ G +  A+ +   
Sbjct: 462 IAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQ 521

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  DI  YNC+IDGLC    ++ A+EL   L       D+VT+N ++ GLC   +
Sbjct: 522 MSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDR 581

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            + A  L  +M  +   P+ + F T+I    +    ++ IE L  M E   +P++S  S+
Sbjct: 582 WEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSI 641

Query: 372 VVDLL 376
           VVD L
Sbjct: 642 VVDAL 646



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 186/365 (50%), Gaps = 2/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  + VTY++I+DGLC  G VD A  L  ++K     PD + Y +++ GLC    W  A+
Sbjct: 422 CVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAE 481

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+     P  VTFN ++  LC+ G +D A R+++ M +    P+  TY+ ++DG 
Sbjct: 482 ELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGL 541

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    I+ A EL   ++S GCK D V++N L+ G C     E+A  L   M+     P  
Sbjct: 542 CNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDE 601

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +T+NT+   L +   +  A++  + M  +    ++STY+  +D L K G    A+EL   
Sbjct: 602 LTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLS- 660

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
            G+     D+  YN +I  L K+G++E AL+L R +    L  D  TY  + +G+C +  
Sbjct: 661 -GMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDG 719

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D+A  +   +++  ++P+   +  ++ GF R  +    I+    M     MPD S   +
Sbjct: 720 TDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVI 779

Query: 372 VVDLL 376
           +++ L
Sbjct: 780 LLEAL 784



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 185/368 (50%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G+   P+T T+N +I  LC  G +  A A+F  M     +P VVTY+ L+   C  + + 
Sbjct: 244 GMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYR 303

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  L  EM  +G +P +VT+NV+++ +C  G +DEA  +L  +     +P+A TY+ ++
Sbjct: 304 QAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVL 363

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
              C + +    EEL   M S  C  D+V++N ++   C+   V+ A+ +   M   G  
Sbjct: 364 KSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCV 423

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
             +VTY+++  GL ++ +V+ A++L   ++      DT  Y T + GLC       A EL
Sbjct: 424 ADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEEL 483

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +    C  D   +N ++  LC+ G ++ A+ +   +       D+VTYN +I GLCN
Sbjct: 484 MAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCN 543

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           +  +D A +L  D++     P+++ F TL+ G   +++     +L+  M      PD   
Sbjct: 544 ESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELT 603

Query: 369 VSMVVDLL 376
            + V+  L
Sbjct: 604 FNTVITSL 611



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 181/349 (51%), Gaps = 3/349 (0%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTYNT+++G C+ G ++ A+ L   + G    PD  T+N LI  LC      +A  +F +
Sbjct: 220 VTYNTMVNGYCRAGRIEDARRL---INGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDD 276

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+ +G  PSVVT+++++D  CK     +A  LLD M  +   P+  TY+ L++  C  G 
Sbjct: 277 MLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGD 336

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           ++ A  +  ++ S GCK D V+Y  ++   C ++  +E   L  EM S    P  VT+NT
Sbjct: 337 VDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNT 396

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +   L +   V+ A+++ + M      AD  TY++ +DGLC  G + +AVEL   L    
Sbjct: 397 IVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 456

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
           C+ D  AY  ++ GLC + + E A EL   +       D VT+N ++  LC  G +D+A 
Sbjct: 457 CKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAI 516

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +   M EN  +P+++ +  +I G    +     +ELL  ++     PD
Sbjct: 517 RVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPD 565



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 187/376 (49%), Gaps = 10/376 (2%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           MA+G G     C P  V  N +I  LC +G V  A+ +F  +        VVTYN++++G
Sbjct: 176 MASGGGR---NCPP-VVPCNILIKRLCSDGRVSDAERVFAALGPSAT---VVTYNTMVNG 228

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
            C A    +A+RL   M      P   TFN ++  LC  G++ +A  + D M+ R   P+
Sbjct: 229 YCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPS 285

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TYS L+D  C      +A  L   M + GC+ D V+YN+LIN  C   +V+EAL++  
Sbjct: 286 VVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILS 345

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            + S G KP  VTY  +   L    + +   +L  EM  ++ A D  T+NT +  LC+ G
Sbjct: 346 NLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQG 405

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            +  A+E+   +    C  DI  Y+ ++DGLC  GR++ A+EL   L       D + Y 
Sbjct: 406 LVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYT 465

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            ++ GLC+  Q ++A +L  +M  +   P+ + F T++    +     + I ++ +M E 
Sbjct: 466 TVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSEN 525

Query: 361 KVMPDASIVSMVVDLL 376
              PD    + ++D L
Sbjct: 526 GCSPDIVTYNCIIDGL 541



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 164/311 (52%), Gaps = 2/311 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT+NT++  LC++G VD+A  +  QM     +PD+VTYN +I GLC+ +  ++A 
Sbjct: 492 CPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAM 551

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  ++   G +P +VTFN ++  LC   + ++A +L+  M++ +  P+  T++T++   
Sbjct: 552 ELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSL 611

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + +A E    M   GC  +  +Y+I+++   K  + + AL L   M +    P +
Sbjct: 612 CQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDL 669

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYNT+   L +  ++E AL L   M  + +  DT+TY +   G+C+      AV + R 
Sbjct: 670 ITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRR 729

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D   YN ++ G C+  R ++A++ F  +     + D  TY I++  L   G 
Sbjct: 730 VQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGL 789

Query: 312 MDKAHDLFLDM 322
           +D+A  L   +
Sbjct: 790 LDEAKRLLASL 800



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 150/312 (48%), Gaps = 12/312 (3%)

Query: 58  IHGLCHANDWNEAKRLFFEMMDQGVQ--PSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           +  L    + +EA  LF  M   G +  P VV  N+++  LC +G++ +A R+   +   
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL--- 213

Query: 116 DVRPNA--FTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
              P+A   TY+T+++G+C  G+I  A  L   M       D  ++N LI   C    + 
Sbjct: 214 --GPSATVVTYNTMVNGYCRAGRIEDARRLINGMPF---PPDTFTFNPLIRALCVRGRIP 268

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           +AL+++ +M+ +G  P+VVTY+ L     +      A+ L +EM+      D  TYN  I
Sbjct: 269 DALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLI 328

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
           + +C  G + EA+ +   L    C+ D   Y  ++  LC S R +   EL   +      
Sbjct: 329 NAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCA 388

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            D VT+N ++  LC  G +D+A ++   M E+    +++ + +++ G   + +    +EL
Sbjct: 389 PDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVEL 448

Query: 354 LHKMKEKKVMPD 365
           L ++K     PD
Sbjct: 449 LSRLKSYGCKPD 460



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 4/177 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKG-ENINPDVVTYNSLIHGLCHANDWNEA 70
           C PN+ TY+ ++D L K G   KA+A    + G  N  PD++TYN++I  L  A    EA
Sbjct: 632 CVPNSSTYSIVVDALLKAG---KAQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEA 688

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             L   M+  G+ P   T+  +   +C+    D A R+L  +    + P+   Y+ ++ G
Sbjct: 689 LDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLG 748

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           FC   + + A + F  M S GC  D+ +Y IL+        ++EA  L   + S G+
Sbjct: 749 FCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGV 805


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 123/362 (33%), Positives = 198/362 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY  +ID LC  G +D A  LF++MK  +  PD VTY +++       D    K
Sbjct: 295 CGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVK 354

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             + EM   G  P V+TF ++++ LCK G +DEA  LLD+M ++ V PN  TY+TL+ G 
Sbjct: 355 EFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGL 414

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +++ A +LF +ME++G      +Y + I+ Y K+   ++AL  + +M  +GI P +
Sbjct: 415 LRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNI 474

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V  N     L E+ ++  A  +F  ++ + +A D+ TYN  +    K G + EA+EL   
Sbjct: 475 VACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSD 534

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +CE DI   N LI+ L K+GR++ A ++F  L    L   VVTYN +I GL  +GQ
Sbjct: 535 MSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQ 594

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + +A +LF  M  N   PN I F T++    + ++    +++L+KM     MPD    + 
Sbjct: 595 VQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNT 654

Query: 372 VV 373
           ++
Sbjct: 655 II 656



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/352 (32%), Positives = 183/352 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  T++ ++    K    +  K+L  +M+   + P++ TY   I  L  A   +EA R
Sbjct: 226 KPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACR 285

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M D G  P VVT+ V++D LC  GK+D+A  L   M     +P+  TY T++D F 
Sbjct: 286 IMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFS 345

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G + R +E +  ME+ G   D +++ IL+N  CK   ++EA  L   M  +G+ P + 
Sbjct: 346 DCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLH 405

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GL  +++++ AL LF  M+   V     TY  FID   K+G   +A+E F  +
Sbjct: 406 TYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKM 465

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            I     +I A N  +  L + GRL  A  +F  L    L  D VTYN+M+      GQ+
Sbjct: 466 KIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQV 525

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           D+A +L  DM EN   P++I+  +LI+   +  +  +  ++  ++K+ K+ P
Sbjct: 526 DEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAP 577



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/331 (33%), Positives = 173/331 (52%), Gaps = 2/331 (0%)

Query: 7    EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            E+GV  KP   +YN +I+G       + A  LF +MK     PDV TYN L+     +  
Sbjct: 783  ELGV--KPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGK 840

Query: 67   WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             NE   L+ +M+    +P+ +T N+I+  L K+  +D+A  L   +V  D  P   TY  
Sbjct: 841  INELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGP 900

Query: 127  LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
            L+DG   +G++  A+ELF  M   GC+ ++  YNILING+ K  +V  A  L++ MV +G
Sbjct: 901  LLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREG 960

Query: 187  IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            I+P + +Y +L   L E  +V+ AL  FE++++  +  D+  YN  IDGL ++  I EA+
Sbjct: 961  IRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEAL 1020

Query: 247  ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
             L+  +       D+  YN LI  L  +G +E A +L+  L    L  +V TYN +I G 
Sbjct: 1021 TLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGY 1080

Query: 307  CNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
               G  D A+ ++  M     +PN   F  L
Sbjct: 1081 SMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/377 (33%), Positives = 187/377 (49%), Gaps = 12/377 (3%)

Query: 4   GNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH 63
           GNG     C PNT+T+NTI+D LCK   VD A  +  +M   N  PDV+T+N++IHGL  
Sbjct: 607 GNG-----CPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVI 661

Query: 64  ANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR-DVRPNAF 122
               ++A  LF +M  + + P  VT   ++  + KNG M++A ++ +  V R  V  +  
Sbjct: 662 EKRVSDAIWLFHQM-KKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRR 720

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMG--CKHDDVSYNILINGYCKNKEVEEALSLYR 180
            +  LM G  LT        LFG     G  CK   V   I I   CK+K+   A S++ 
Sbjct: 721 FWEDLMGGI-LTQAGTEKTILFGDRLVCGRVCKDGSVLMPI-IKVLCKHKQALVAQSVFI 778

Query: 181 EMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
               + G+KPT+ +YN L  G   +H  E A  LF EM+    A D  TYN  +D   K+
Sbjct: 779 RFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKS 838

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G I E  EL+  +    C+ +   +N +I  L KS  L+ AL+LF  L          TY
Sbjct: 839 GKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTY 898

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
             ++ GL   G++++A +LF +M +    PN  I+  LI+GF +    +   EL  +M  
Sbjct: 899 GPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVR 958

Query: 360 KKVMPDASIVSMVVDLL 376
           + + PD    + +V  L
Sbjct: 959 EGIRPDLKSYTSLVGCL 975



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 174/334 (52%), Gaps = 2/334 (0%)

Query: 9    GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDW 67
            G VCK  +V    II  LCK      A+++F++   E  + P + +YN LI G    ++ 
Sbjct: 748  GRVCKDGSVLM-PIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHND 806

Query: 68   NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
              A  LF EM + G  P V T+N+++D   K+GK++E   L + M+    +PN  T++ +
Sbjct: 807  EMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNII 866

Query: 128  MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
            +     +  +++A +LF  + S        +Y  L++G  K+  +EEA  L+ EMV  G 
Sbjct: 867  IANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGC 926

Query: 188  KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            +P    YN L  G  +   V  A +LF+ M R+ +  D  +Y + +  LC+ G + +A+ 
Sbjct: 927  RPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALH 986

Query: 248  LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
             F  L      LD  AYN +IDGL +S R+E AL L+  +  R +  D+ TYN +I  L 
Sbjct: 987  YFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLG 1046

Query: 308  NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
              G +++A  L+ +++   + PNV  +  LI G+
Sbjct: 1047 VAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGY 1080



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 183/362 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  +YN +I  L + G   +A  ++ +M  E + P + T+++L+       D    K L 
Sbjct: 193 NAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLL 252

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM   G++P++ T+ + +  L + G++DEA R++  M      P+  TY+ L+D  C  
Sbjct: 253 EEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTA 312

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK++ A ELF  M++   K D V+Y  +++ +    ++      + EM + G  P V+T+
Sbjct: 313 GKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITF 372

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L   L +   ++ A  L + M++  V  +  TYNT I GL +   + +A++LF  +  
Sbjct: 373 TILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMET 432

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L        Y   ID   KSGR + ALE F  +  R +  ++V  N  ++ L   G++ +
Sbjct: 433 LGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLRE 492

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  +F  ++ N +AP+ + +  ++  + +  +  + IELL  M E +  PD  +++ +++
Sbjct: 493 AKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLIN 552

Query: 375 LL 376
            L
Sbjct: 553 TL 554



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 185/391 (47%), Gaps = 38/391 (9%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA- 70
            C P+ +T+NTII GL  E  V  A  LF QMK + + PD VT  +L+ G+       +A 
Sbjct: 645  CMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMK-KMLTPDCVTLCTLLPGVVKNGLMEDAF 703

Query: 71   --------------KRLFFEMMDQGVQPSVVTFNVIM-------DELCKNG--------- 100
                           R F+E +  G+     T   I+         +CK+G         
Sbjct: 704  KIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKV 763

Query: 101  --KMDEA----SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
              K  +A    S  +    +  V+P   +Y+ L++GF        A  LF  M++ GC  
Sbjct: 764  LCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAP 823

Query: 155  DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
            D  +YN+L++ + K+ ++ E   LY +M+    KP  +T+N +   L + + ++ AL LF
Sbjct: 824  DVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLF 883

Query: 215  EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
             ++   D +    TY   +DGL K+G + EA ELF  +    C  +   YN LI+G  K+
Sbjct: 884  YDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKT 943

Query: 275  GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            G +  A ELF+ + R  +  D+ +Y  ++  LC  G++D A   F  +++  +  + I +
Sbjct: 944  GDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAY 1003

Query: 335  VTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
              +I G  R ++  + + L  +M+ + + PD
Sbjct: 1004 NLMIDGLGRSHRIEEALTLYDEMQSRGINPD 1034



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 181/400 (45%), Gaps = 38/400 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ +  N++I+ L K G VD+A  +F ++K   + P VVTYN+LI GL        A 
Sbjct: 540 CEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAM 599

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M   G  P+ +TFN I+D LCKN ++D A ++L  M   +  P+  T++T++ G 
Sbjct: 600 ELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGL 659

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPT 190
            +  +++ A  LF  M+ M    D V+   L+ G  KN  +E+A  +  + V + G+   
Sbjct: 660 VIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVD 718

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN----------- 239
              +  L  G+      E  +   + +    V  D S     I  LCK+           
Sbjct: 719 RRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFI 778

Query: 240 ---------------GYIVE----------AVELFRTLGILKCELDIQAYNCLIDGLCKS 274
                           +++E          A  LF  +    C  D+  YN L+D   KS
Sbjct: 779 RFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKS 838

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G++    EL+  +       + +T+NI+I  L     +DKA DLF D+     +P    +
Sbjct: 839 GKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTY 898

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             L+ G ++  +  +  EL  +M +    P+ +I +++++
Sbjct: 899 GPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILIN 938



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 139/303 (45%), Gaps = 35/303 (11%)

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
           + +LM  + ++ +  TY  +  G  + G + +    FG M   G   +  SYN LI+   
Sbjct: 146 VFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLL 205

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           ++    EAL +YR MV +G+KP++ T++ L +   +    E    L EEM+   +  +  
Sbjct: 206 QSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIY 265

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           TY   I  L + G I EA  + + +    C  D+  Y  LID LC +G+L+ A+ELF  +
Sbjct: 266 TYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKM 325

Query: 288 ------PRRV-----------------------------LVADVVTYNIMIHGLCNDGQM 312
                 P RV                                DV+T+ I+++ LC  G +
Sbjct: 326 KASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNI 385

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A  L   M +  V PN+  + TLI G +R+N+    ++L + M+   V+P A    + 
Sbjct: 386 DEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILF 445

Query: 373 VDL 375
           +D 
Sbjct: 446 IDF 448



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 82/152 (53%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            +P+  +Y +++  LC+ G VD A   F ++K   +  D + YN +I GL  ++   EA  
Sbjct: 962  RPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALT 1021

Query: 73   LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            L+ EM  +G+ P + T+N ++  L   G +++A +L + +    + PN FTY+ L+ G+ 
Sbjct: 1022 LYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYS 1081

Query: 133  LTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
            ++G  + A  ++  M   GC  +  ++  L N
Sbjct: 1082 MSGNSDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 125/354 (35%), Positives = 198/354 (55%), Gaps = 5/354 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +TY  +++GLC+ G VD+A+ L  ++      P+ V +  LI+G   +   +EA   
Sbjct: 311 PNDITYGVLMNGLCRVGKVDEAQVLLNKVP----TPNDVHFTILINGYVKSGRLDEANAF 366

Query: 74  FFE-MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            ++ M+  G +P V TFN ++  LCK G M  A  +++ M      PN  TY+TL+DGFC
Sbjct: 367 LYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFC 426

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++  A  +   M + G + + + YN+L+   CKN +V +AL +  EM  KG KP + 
Sbjct: 427 KKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIF 486

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL  GL ++ + E AL L+ +M  D V A+T TYNT I    + G I EA++L   +
Sbjct: 487 TFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDM 546

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C LD   YN LI   CK G  E AL LF  + R+ LV   ++ N++I+GLC  G++
Sbjct: 547 LFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKV 606

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             A +L  DM    +AP+V+ + +LI+G  ++    +   L +K++ + + PDA
Sbjct: 607 CNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDA 660



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 113/332 (34%), Positives = 178/332 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+  T+NT+I GLCK+G +  A  +   M      P+++TY +L+ G C  N   EA 
Sbjct: 376 CRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAG 435

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  EM  +G + +++ +NV++  LCKNGK+ +A  +L  M  +  +P+ FT++TL+ G 
Sbjct: 436 YVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGL 495

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +   A  L+  M   G   + V+YN LI+ + +   ++EAL L  +M+ +G     
Sbjct: 496 CKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDE 555

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYN L     ++   E AL LF+EM R D+     + N  I+GLC+ G +  A+EL R 
Sbjct: 556 ITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRD 615

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D+  YN LI+GLCK G +  A  LF  L    +  D +TYN +I   C  G 
Sbjct: 616 MIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGM 675

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            D A+ L L   ENA  PN + +  L+  F++
Sbjct: 676 FDDAYLLLLRGVENAFIPNDVTWYILVSNFIK 707



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/345 (33%), Positives = 182/345 (52%), Gaps = 5/345 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   T+  ++  LC    VD A +L   M      P+ V Y +LIH L   +  NEA +L
Sbjct: 206 PTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKL 265

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G  P V TFN ++  LC+  ++ E ++L+D M+ R   PN  TY  LM+G C 
Sbjct: 266 LEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCR 325

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS-LYREMVSKGIKPTVV 192
            GK++ A+ L   + +     +DV + ILINGY K+  ++EA + LY +M+  G +P V 
Sbjct: 326 VGKVDEAQVLLNKVPT----PNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVF 381

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL  GL +   +  A+ +  +M  +    +  TY T +DG CK   + EA  +   +
Sbjct: 382 TFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEM 441

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                EL+I  YN L+  LCK+G++  AL++   +  +    D+ T+N +I GLC   + 
Sbjct: 442 SAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRK 501

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           + A  L+ DM  + V  N + + TLIH F+R     + ++L++ M
Sbjct: 502 EDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDM 546



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 167/357 (46%), Gaps = 33/357 (9%)

Query: 34  KAKALFLQMKGENI-NPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
           +A  + L MKG     P   +YN ++  L  AN  + A  +F+EM+ +GV P+V TF V+
Sbjct: 155 QATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVV 214

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           M  LC   ++D A  LL  M +    PN+  Y TL+       ++N A +L   M  MGC
Sbjct: 215 MKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGC 274

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA-- 210
             D  ++N +I G C+   + E   L   M+ +G  P  +TY  L  GL  + +V+ A  
Sbjct: 275 LPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQV 334

Query: 211 ------------------------------LKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
                                           L+++M ++    D  T+NT I GLCK G
Sbjct: 335 LLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKG 394

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            +  AV++   +    C  ++  Y  L+DG CK  +LE A  +   +  +    +++ YN
Sbjct: 395 LMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYN 454

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           +++  LC +G++ KA D+  +M +    P++  F TLI G  ++++    + L   M
Sbjct: 455 VLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDM 511



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/205 (20%), Positives = 98/205 (47%), Gaps = 2/205 (0%)

Query: 171 EVEEALSLYREMVS-KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
           +V  ++++++   S KG   T   Y+ L   L    + +   KL  +++ + +A   S +
Sbjct: 81  DVSTSMAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLF 140

Query: 230 NTFIDGLCKNGYIVEAVELFRTL-GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
              +    +     +A  +   + G+  CE   ++YN ++D L  +    +A  +F  + 
Sbjct: 141 ICIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEML 200

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
            + ++  V T+ +++  LC   ++D A  L  DM ++   PN +++ TLIH   + ++ +
Sbjct: 201 SKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVN 260

Query: 349 KVIELLHKMKEKKVMPDASIVSMVV 373
           + ++LL +M     +PD    + V+
Sbjct: 261 EALKLLEEMFLMGCLPDVDTFNDVI 285


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 200/389 (51%), Gaps = 36/389 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PN  TYN ++DGLCK G   +A  ++ +M   N  PD++TY ++IHGLC + D + A R
Sbjct: 262 SPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAAR 321

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR-------------- 118
           ++ EM+  G+ P VV +N ++   C  G++ EA +  D M    +R              
Sbjct: 322 VYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFD 381

Query: 119 ---------------------PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
                                P+  T+ST++ G C  G  N++ ++     + G + D+ 
Sbjct: 382 GGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEF 441

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           SY+ +I+G CK+  +++A+ LY ++     KP    YN L  G  +  +   A++++ +M
Sbjct: 442 SYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQM 501

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
             +D +  T TYNT I GLCK    +EA    R +    C LD+  Y  LI GLC+  ++
Sbjct: 502 AENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKI 561

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM-EENAVAPNVIIFVT 336
           + AL L+  +  + L  DVV +NI+IHGLC+ G++D+A  L  +M E+N   PNV+ + T
Sbjct: 562 DGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNT 621

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           L+ GF       K   L   + E  ++PD
Sbjct: 622 LMDGFYETGCFDKAASLWMAILENGLVPD 650



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 193/406 (47%), Gaps = 38/406 (9%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           +G  G    PN  TYN ++  LC  G +D+A  LF  ++   + PD +TY++L+ G    
Sbjct: 148 HGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKN 207

Query: 65  NDWNEAKRLFFEM------------------------------------MDQGVQPSVVT 88
           N  + A  L  EM                                     D G  P++ T
Sbjct: 208 NRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLAT 267

Query: 89  FNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSME 148
           +NV++D LCK G   EA  + + MV  + +P+  TY T++ G C +  ++ A  ++  M 
Sbjct: 268 YNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMI 327

Query: 149 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 208
             G   D V YN L+ G+C    V EA   +  M   GI+  V +YN +  GLF+   V+
Sbjct: 328 KTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVD 386

Query: 209 HALKLFEEMQRDD-VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
            A  L+E +++DD ++ D  T++T I GLC+ G+  +++++         ELD  +Y+ +
Sbjct: 387 KATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSM 446

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           I GLCK GRL+ A++L+  +       +   YN +I+G C   +   A  ++  M EN  
Sbjct: 447 ISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDC 506

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +P  I + TLIHG  +  K  +      +M EK  M D +    ++
Sbjct: 507 SPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLI 552



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 191/389 (49%), Gaps = 38/389 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TY+T++ G  K   +D A  L  +M    + PD V YN+L+ G     ++ +A R+
Sbjct: 192 PDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRV 251

Query: 74  FFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           + +++ D G  P++ T+NV++D LCK G   EA  + + MV  + +P+  TY T++ G C
Sbjct: 252 WEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLC 311

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +  ++ A  ++  M   G   D V YN L+ G+C    V EA   +  M   GI+  V 
Sbjct: 312 RSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVT 370

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDD-VAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +YN +  GLF+   V+ A  L+E +++DD ++ D  T++T I GLC+ G+  +++++   
Sbjct: 371 SYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEE 430

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD---------------- 295
                 ELD  +Y+ +I GLCK GRL+ A++L+  +       +                
Sbjct: 431 ARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASK 490

Query: 296 -------------------VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
                               +TYN +IHGLC   +  +A     +M E     +V  + +
Sbjct: 491 FSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGS 550

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LI G  R  K    + L +++ +K +  D
Sbjct: 551 LIRGLCRDKKIDGALALWNQILDKGLQTD 579



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 177/331 (53%), Gaps = 2/331 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALF-LQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           N  +YN ++ GL   G VDKA  L+ L  K ++++PD+VT++++IHGLC     N++ ++
Sbjct: 368 NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQI 427

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             E    G +    +++ ++  LCK+G++D+A +L + +     +PN+  Y+ L++GFC 
Sbjct: 428 LEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQ 487

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K + A  ++  M    C    ++YN LI+G CK ++  EA    REM+ KG    V T
Sbjct: 488 ASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNT 547

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +L  GL    +++ AL L+ ++    +  D   +N  I GLC  G + EA +L   + 
Sbjct: 548 YGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMK 607

Query: 254 ILK-CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  ++  YN L+DG  ++G  + A  L+ ++    LV D+++YN  I GLC+  + 
Sbjct: 608 EKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRT 667

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            +   L  +M  + + P  I +  L+   ++
Sbjct: 668 PEGVQLLNEMLASGIIPTAITWNILVRAVIK 698



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 186/394 (47%), Gaps = 42/394 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMK----GENINPDVVTYNSLIHGLCHANDW 67
           C P   ++N ++D   +      A A F  +     G  I P++ TYN ++  LC   D 
Sbjct: 116 CNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDL 175

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           + A  LF  +  +G+ P  +T++ +M    KN ++D A  LLD M   +V+P+A  Y+ L
Sbjct: 176 DRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNAL 235

Query: 128 MDGFCLTGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           + G    G+  +A  ++  +    G   +  +YN++++G CK    +EA  ++  MV+  
Sbjct: 236 LGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANN 295

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            +P ++TY T+  GL     V+ A +++ EM +  +  D   YN+ + G C  G + EA 
Sbjct: 296 HQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAW 355

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR-VLVADVVTYNIMIH- 304
           + + ++ +     ++ +YN ++ GL   G ++ A +L+  L +   L  D+VT++ MIH 
Sbjct: 356 KFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHG 414

Query: 305 ----------------------------------GLCNDGQMDKAHDLFLDMEENAVAPN 330
                                             GLC DG++D A  L+  +  ++  PN
Sbjct: 415 LCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPN 474

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
             I+  LI+GF + +K S  I +  +M E    P
Sbjct: 475 SHIYNALINGFCQASKFSDAIRVYSQMAENDCSP 508



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 161/303 (53%), Gaps = 5/303 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ VT++T+I GLC++GF +K+  +  + +      D  +Y+S+I GLC     ++A +
Sbjct: 402 SPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVK 461

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L+ ++     +P+   +N +++  C+  K  +A R+   M + D  P   TY+TL+ G C
Sbjct: 462 LYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLC 521

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K   A      M   GC  D  +Y  LI G C++K+++ AL+L+ +++ KG++  VV
Sbjct: 522 KAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVV 581

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +N L  GL    +V+ A +L  EM ++++   +  TYNT +DG  + G   +A  L+  
Sbjct: 582 MHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLW-- 639

Query: 252 LGILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + IL+  L  DI +YN  I GLC   R    ++L   +    ++   +T+NI++  +   
Sbjct: 640 MAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKY 699

Query: 310 GQM 312
           G +
Sbjct: 700 GPI 702



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 168/336 (50%), Gaps = 41/336 (12%)

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ----RDVRPNAFTYSTLMDGFCLTGK 136
           G  P V + N ++D   +  +  +A      +      R + PN  TY+ ++   C+ G 
Sbjct: 115 GCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGD 174

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           ++RA  LF S+   G   D ++Y+ L++G+ KN  ++ AL L  EM S  ++P  V YN 
Sbjct: 175 LDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNA 234

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAA-DTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           L  G F   + E A++++E++ RD  A+ + +TYN  +DGLCK G   EA +++  +   
Sbjct: 235 LLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVAN 294

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV------------------ 297
             + D+  Y  +I GLC+S  ++ A  ++  + +  LV DVV                  
Sbjct: 295 NHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEA 354

Query: 298 ----------------TYNIMIHGLCNDGQMDKAHDLFLDME-ENAVAPNVIIFVTLIHG 340
                           +YNIM+ GL + G +DKA DL+  +E +++++P+++ F T+IHG
Sbjct: 355 WKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHG 414

Query: 341 FVRINKPSKVIELLHKMKEK-KVMPDASIVSMVVDL 375
                  +K +++L + +   K + + S  SM+  L
Sbjct: 415 LCEKGFANKSLQILEEARTSGKELDEFSYSSMISGL 450



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/198 (38%), Positives = 112/198 (56%), Gaps = 1/198 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P T+TYNT+I GLCK     +A     +M  +    DV TY SLI GLC     + A 
Sbjct: 506 CSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGAL 565

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR-DVRPNAFTYSTLMDG 130
            L+ +++D+G+Q  VV  N+++  LC  GK+DEAS+LL  M ++ +  PN  TY+TLMDG
Sbjct: 566 ALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDG 625

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           F  TG  ++A  L+ ++   G   D +SYN  I G C      E + L  EM++ GI PT
Sbjct: 626 FYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPT 685

Query: 191 VVTYNTLFLGLFEIHQVE 208
            +T+N L   + +   ++
Sbjct: 686 AITWNILVRAVIKYGPIQ 703



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)

Query: 245 AVELFRTL-GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR----RVLVADVVTY 299
           A+  FR L   L C   ++++N L+D   ++ R   A   F SL      R +  ++ TY
Sbjct: 103 ALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTY 162

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           NIM+  LC  G +D+A  LF  +    +AP+ I + TL+ GFV+ N+    + LL +M  
Sbjct: 163 NIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPS 222

Query: 360 KKVMPDA 366
            +V PDA
Sbjct: 223 YEVQPDA 229


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 120/321 (37%), Positives = 184/321 (57%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TYNTIIDG CK G + KA AL  +M  + I+P+ +T+N LI G C   +   AK++
Sbjct: 262 PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKV 321

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM  QG+QP+VVT+N +++ LC NGK+DEA  L D M    ++PN  TY+ L++GFC 
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +  A E+   +   G   + +++N LI+ Y K   +++A  L   M+  G+ P V T
Sbjct: 382 KKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVST 441

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L +G      V+ A KL +EM+ + + AD  TYN  +D LCK G   +AV L   + 
Sbjct: 442 YNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMF 501

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +        YN LIDG  + G    AL +   + ++   A++VTYN++I G CN G+++
Sbjct: 502 EVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLE 561

Query: 314 KAHDLFLDMEENAVAPNVIIF 334
           +A+ L  +M E  + PN   +
Sbjct: 562 EANRLLNEMLEKGLIPNRTTY 582



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 196/360 (54%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N VT++ +I+GLCK G   KA  +   MK    +P V+TYN++I G C A    +A  L 
Sbjct: 228 NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALL 287

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ + + P+ +TFN+++D  C++  +  A ++ + M ++ ++PN  TY++L++G C  
Sbjct: 288 KEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSN 347

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK++ A  L   M  MG K + V+YN LING+CK K ++EA  +  ++  +G+ P V+T+
Sbjct: 348 GKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITF 407

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           NTL     +  +++ A  L   M    V  + STYN  I G C+ G + EA +L + +  
Sbjct: 408 NTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEG 467

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + D+  YN L+D LCK G    A+ L   +    L    +TYN +I G   +G    
Sbjct: 468 NGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTA 527

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A ++   ME+     N++ +  LI GF    K  +   LL++M EK ++P+ +   ++ D
Sbjct: 528 ALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRD 587



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 93/237 (39%), Positives = 135/237 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTYN++I+GLC  G +D+A  L  +M G  + P+VVTYN+LI+G C      EA+ 
Sbjct: 331 QPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEARE 390

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  ++  +G+ P+V+TFN ++D   K G+MD+A  L  +M+   V PN  TY+ L+ GFC
Sbjct: 391 MLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFC 450

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A +L   ME  G K D V+YNIL++  CK  E  +A+ L  EM   G+ P+ +
Sbjct: 451 REGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHL 510

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           TYN L  G F       AL +   M++    A+  TYN  I G C  G + EA  L 
Sbjct: 511 TYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLL 567



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 189/360 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N++  + ++    K G +D A   F +          ++ N ++  L         + ++
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ + +  +VVTF+V+++ LCK GK  +A  +++ M      P+  TY+T++DG+C  
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK+ +A+ L   M +     +++++NILI+G+C+++ V  A  ++ EM  +G++P VVTY
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N+L  GL    +++ AL L ++M    +  +  TYN  I+G CK   + EA E+   +G 
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                ++  +N LID   K+GR++ A  L   +    +  +V TYN +I G C +G + +
Sbjct: 398 RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKE 457

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  L  +ME N +  +++ +  L+    +  +  K + LL +M E  + P     + ++D
Sbjct: 458 ARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALID 517



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 159/298 (53%)

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           D G + S ++ N ++  L K G++     +   M++R +  N  T+  +++G C  GK  
Sbjct: 187 DYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQ 246

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
           +A ++   M++ G     ++YN +I+GYCK  ++ +A +L +EMV+K I P  +T+N L 
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILI 306

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            G      V  A K+FEEMQR  +  +  TYN+ I+GLC NG + EA+ L   +  +  +
Sbjct: 307 DGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLK 366

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            ++  YN LI+G CK   L+ A E+   + +R L  +V+T+N +I      G+MD A  L
Sbjct: 367 PNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLL 426

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              M +  V PNV  +  LI GF R     +  +L  +M+   +  D    +++VD L
Sbjct: 427 RSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDAL 484



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 107/184 (58%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +T+NT+ID   K G +D A  L   M    + P+V TYN LI G C   +  EA++L
Sbjct: 402 PNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKL 461

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G++  +VT+N+++D LCK G+  +A RLLD M +  + P+  TY+ L+DG+  
Sbjct: 462 AKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFR 521

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G    A  +   ME  G + + V+YN+LI G+C   ++EEA  L  EM+ KG+ P   T
Sbjct: 522 EGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTT 581

Query: 194 YNTL 197
           Y+ L
Sbjct: 582 YDIL 585



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 123/234 (52%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G+  KPN VTYN +I+G CK+  + +A+ +   +    + P+V+T+N+LI     A   +
Sbjct: 362 GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMD 421

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  L   M+D GV P+V T+N ++   C+ G + EA +L   M    ++ +  TY+ L+
Sbjct: 422 DAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILV 481

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           D  C  G+  +A  L   M  +G     ++YN LI+GY +      AL++   M  KG +
Sbjct: 482 DALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRR 541

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
             +VTYN L  G     ++E A +L  EM    +  + +TY+   D + + G+I
Sbjct: 542 ANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFI 595


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  228 bits (580), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 124/362 (34%), Positives = 184/362 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K ++ TYN +I GL  +GFV KA  L L+M+ E I P VVTYN++IHGL  +     A+ 
Sbjct: 305 KASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQV 364

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM   G+QP V+T+N +++  CK G + EA  L   +    + P   TY+ L+DG+C
Sbjct: 365 KFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYC 424

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  L   M   GC  D  +Y IL+ G      +  A   + EM+SKG++P   
Sbjct: 425 RLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCF 484

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YNT       +  +  A +L E M  + +++DT TYN  IDGLCK G + +A +L   +
Sbjct: 485 AYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKM 544

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D   Y CLI   C+ G L  A + F+ +    L    VTY + IH  C  G +
Sbjct: 545 VHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNL 604

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A+  F  M E  V PN I +  LIH   R  +        H+M E+ ++P+    +++
Sbjct: 605 YSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLL 664

Query: 373 VD 374
           +D
Sbjct: 665 ID 666



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 178/363 (49%), Gaps = 35/363 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTYN +I GL + G V+ A+  F++M+   + PDV+TYNSL++G C A    EA  L
Sbjct: 341 PTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLL 400

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F ++   G+ P+V+T+N+++D  C+ G ++EA RL + MV++   P+  TY+ LM G   
Sbjct: 401 FGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHN 460

Query: 134 TGKINRAEELFGSMESMGCK-----------------------------------HDDVS 158
              +  A E F  M S G +                                    D V+
Sbjct: 461 ACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVT 520

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YNILI+G CK   + +A  L  +MV  G++P  +TY  L     E   +  A K F++M 
Sbjct: 521 YNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMI 580

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
            D +A    TY  FI   C+ G +  A   FR +     E +   YN LI  LC++GR +
Sbjct: 581 SDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQ 640

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           +A   F  +  R LV +  TY ++I G C +G  + A   + +M +N + P+ +    L 
Sbjct: 641 LAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALF 700

Query: 339 HGF 341
            GF
Sbjct: 701 KGF 703



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 166/340 (48%), Gaps = 3/340 (0%)

Query: 39  FLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
           F +M    + PDV   N ++  L  A  W++   +  EM+  G++PS+VT+N ++D   K
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249

Query: 99  NGKMDEASRLLDLMVQR--DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
            G+ D+ + LL  M  R     PN  T++ ++ G    G +  A E+   M  +  K   
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMR-LSKKASS 308

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            +YN LI G      V++A  L  EM ++GI PTVVTYN +  GL +  QVE A   F E
Sbjct: 309 FTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVE 368

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M+   +  D  TYN+ ++G CK G + EA+ LF  L        +  YN LIDG C+ G 
Sbjct: 369 MRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGD 428

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           LE A  L   +  +  + DV TY I++ G  N   +  A + F +M    + P+   + T
Sbjct: 429 LEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNT 488

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            I   + +   +K   L   M  + +  D    ++++D L
Sbjct: 489 RIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGL 528



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 155/314 (49%), Gaps = 5/314 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  +TYN +IDG C+ G +++A+ L  +M  +   PDV TY  L+ G  +A     A+  
Sbjct: 411 PTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREF 470

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+ +G+QP    +N  +      G + +A RL ++M+   +  +  TY+ L+DG C 
Sbjct: 471 FDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCK 530

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG +N A++L   M   G + D ++Y  LI+ +C+   + EA   +++M+S G+ P+ VT
Sbjct: 531 TGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVT 590

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y            +  A   F +M  + V  +  TYN  I  LC+ G    A   F  + 
Sbjct: 591 YTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEML 650

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +   Y  LIDG CK G  E A+  +  + +  +  D +T+  +  G  ++G M+
Sbjct: 651 ERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF-DEGHMN 709

Query: 314 KAHDLFLDMEENAV 327
            A    ++  ENAV
Sbjct: 710 HA----IEYLENAV 719



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 163/363 (44%), Gaps = 36/363 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+    N ++  L      D   A+  +M    I P +VTYN+L+         ++   L
Sbjct: 200 PDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAML 259

Query: 74  FFEMMDQGVQ--PSVVTFNVIMDELCKNGKMDEASRLL---------------------- 109
             EM  +G    P+ VT NV++  L + G ++EA+ ++                      
Sbjct: 260 LKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLL 319

Query: 110 ---------DLMVQRD---VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
                    DL ++ +   + P   TY+ ++ G   +G++  A+  F  M +MG + D +
Sbjct: 320 AKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVI 379

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +YN L+NGYCK   ++EAL L+ ++   G+ PTV+TYN L  G   +  +E A +L EEM
Sbjct: 380 TYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM 439

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
                  D  TY   + G      +  A E F  +     + D  AYN  I      G +
Sbjct: 440 VEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAI 499

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A  L   +    + +D VTYNI+I GLC  G ++ A DL + M  N + P+ I +  L
Sbjct: 500 AKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCL 559

Query: 338 IHG 340
           IH 
Sbjct: 560 IHA 562



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 3/192 (1%)

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
           LS + EM S G+ P V   N +   L +  + +    +  EM +  +     TYNT +D 
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246

Query: 236 LCKNGYIVEAVELFRTLGIL--KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
             K G   +   L + +      C  +   +N +I GL + G LE A E+   + R    
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGM-RLSKK 305

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
           A   TYN +I GL   G + KA DL L+ME   + P V+ +  +IHG ++  +       
Sbjct: 306 ASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVK 365

Query: 354 LHKMKEKKVMPD 365
             +M+   + PD
Sbjct: 366 FVEMRAMGLQPD 377


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  227 bits (579), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 197/364 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTYNT+I+G C  G  + A  +F  MK +N+ PD  TYNS I  LC      EA  
Sbjct: 249 KPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASG 308

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  ++++ G+ P+ VT+N ++D  C  G +D+A    D M+ R +  + FTY+ L+    
Sbjct: 309 VLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALF 368

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L  +I  AE++   M   G + D V+YNI INGYC+    ++ALSL+ EMV K I+PTV 
Sbjct: 369 LEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVE 428

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY +L     + +++  A + F++  ++ +  D   +N  IDG C NG I  A +L + +
Sbjct: 429 TYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEM 488

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K   D   +N L+ G C+  ++E A +L   +  R +  D ++YN +I G    G M
Sbjct: 489 DNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDM 548

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A ++F +M      P ++ +  LI G+ +I +     ELL +M+ K + PD S    V
Sbjct: 549 KDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYV 608

Query: 373 VDLL 376
           ++ +
Sbjct: 609 IEAM 612



 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/348 (33%), Positives = 190/348 (54%), Gaps = 6/348 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + VT+N +I+ LC+EG   KAK     M+   + P+VVTYN++I+G C    +  A +
Sbjct: 214 KSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASK 273

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  M D+ ++P   T+N  +  LCK  +++EAS +L  +++  + PNA TY+ L+DG C
Sbjct: 274 IFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCC 333

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +++A      M + G      +YN+LI+     K +EEA  + +EM  KG++P VV
Sbjct: 334 NKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVV 393

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN    G       + AL LF+EM   ++     TY + ID   K   + EA E F+  
Sbjct: 394 TYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKS 453

Query: 253 ---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
              G+L    DI  +N LIDG C +G ++ A +L + +    +V D VT+N ++ G C +
Sbjct: 454 IKEGMLP---DIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRE 510

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            ++++A  L  +M+E  + P+ I + TLI G+ +       +E+  +M
Sbjct: 511 RKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEM 558



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 179/331 (54%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
           A  ++ +M   NI   +VT+N +I+ LC    W +AK     M   GV+P+VVT+N +++
Sbjct: 201 AWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVIN 260

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
             C  GK + AS++   M  ++++P+ +TY++ +   C   +I  A  +   +   G   
Sbjct: 261 GYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVP 320

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           + V+YN LI+G C   ++++A +   EM+++GI  +V TYN L   LF   ++E A  + 
Sbjct: 321 NAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMI 380

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           +EM+   V  D  TYN  I+G C+ G   +A+ LF  +        ++ Y  LID   K 
Sbjct: 381 KEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKR 440

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            R+  A E F+   +  ++ D++ +N +I G C +G +D+A  L  +M+   V P+ + F
Sbjct: 441 NRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTF 500

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            TL+ G+ R  K  +  +LL +MKE+ + PD
Sbjct: 501 NTLMQGYCRERKVEEAKKLLDEMKERGIKPD 531



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 91/232 (39%), Positives = 137/232 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTYN  I+G C+ G   KA +LF +M  +NI P V TY SLI      N  +EA+ 
Sbjct: 389 EPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEE 448

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F + + +G+ P ++ FN ++D  C NG +D A +LL  M    V P+  T++TLM G+C
Sbjct: 449 KFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYC 508

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K+  A++L   M+  G K D +SYN LI+GY K  ++++AL ++ EM+S G  PT++
Sbjct: 509 RERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLL 568

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           TYN L  G  +I + +HA +L  EMQ   +  D STY   I+ +  N  +VE
Sbjct: 569 TYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVE 620



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 153/299 (51%), Gaps = 14/299 (4%)

Query: 85  SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELF 144
           + + F++++   C+  K DEA   L+LM + ++ P   T ++L+       KI  A  ++
Sbjct: 146 TTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVY 205

Query: 145 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 204
             M  M  K   V++NI+IN  C+  + ++A      M   G+KP VVTYNT+  G    
Sbjct: 206 EEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLR 265

Query: 205 HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL----- 259
            + E A K+F+ M+  ++  D  TYN+FI  LCK   I EA       G+L C+L     
Sbjct: 266 GKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEAS------GVL-CKLLESGL 318

Query: 260 --DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             +   YN LIDG C  G L+ A      +  R +VA V TYN++IH L  + ++++A D
Sbjct: 319 VPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAED 378

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +  +M E  V P+V+ +   I+G+ R     K + L  +M EK + P     + ++D+ 
Sbjct: 379 MIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVF 437


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  227 bits (579), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 128/376 (34%), Positives = 206/376 (54%), Gaps = 15/376 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VT+N++++GLCK G ++ A+ +F +M  E + PDVV+YN+L+ G C     +E+  
Sbjct: 78  KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLA 137

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM  +G+ P VVTF  ++   CK G +++A  L+  M +R +R N  T++ L+DGFC
Sbjct: 138 VFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFC 197

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A      M   G +   V YN LINGYCK   ++ A  L REM +K +KP VV
Sbjct: 198 KKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVV 257

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+T+  G  ++  ++ A +L ++M +  V  D  TY++ I GLC+   + +A ELF  +
Sbjct: 258 TYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 317

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             L  + D   Y  LIDG CK G +E AL L   + R+ ++ DVVTY+++I+GL    + 
Sbjct: 318 LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSART 377

Query: 313 DKAHDLFLDMEENAVAPNVIIF---------------VTLIHGFVRINKPSKVIELLHKM 357
            +AH L   +      P+ I +               V L+ GF       +  ++   M
Sbjct: 378 KEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSM 437

Query: 358 KEKKVMPDASIVSMVV 373
            ++    D S+ S+++
Sbjct: 438 LDRNWKLDGSVYSILI 453



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 122/361 (33%), Positives = 202/361 (55%), Gaps = 7/361 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDW 67
           G  C PN VTYNT++   C+ G +D A+ +   M+ E N  P++VT+NS+++GLC A   
Sbjct: 38  GAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRM 97

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A+++F EM+ +G+ P VV++N ++   CK G + E+  +   M QR + P+  T+++L
Sbjct: 98  EGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSL 157

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +   C  G + +A  L   M   G + ++V++  LI+G+CK   +++AL    EM   GI
Sbjct: 158 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 217

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P+VV YN L  G  ++ +++ A +L  EM+   V  D  TY+T I G CK G +  A +
Sbjct: 218 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 277

Query: 248 LFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           L + +   G+L    D   Y+ LI GLC+  RL  A ELF ++ +  +  D  TY  +I 
Sbjct: 278 LNQKMLKKGVLP---DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLID 334

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G C +G ++KA  L  +M    V P+V+ +  LI+G  +  +  +   LL K+  +  +P
Sbjct: 335 GHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVP 394

Query: 365 D 365
           D
Sbjct: 395 D 395



 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 205/364 (56%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN ++  LC  G +++A  +   M+G    P+ VTYN+L+   C A + + A+R+
Sbjct: 8   PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67

Query: 74  FFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              M ++G  +P++VTFN +++ LCK G+M+ A ++ D MV+  + P+  +Y+TL+ G+C
Sbjct: 68  VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 127

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ +  +F  M   G   D V++  LI+  CK   +E+A++L  +M  +G++   V
Sbjct: 128 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 187

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+  L  G  +   ++ AL   EEM++  +      YN  I+G CK G +  A EL R +
Sbjct: 188 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 247

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + + D+  Y+ +I G CK G L+ A +L + + ++ ++ D +TY+ +I GLC + ++
Sbjct: 248 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 307

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A +LF +M +  V P+   + TLI G  +     K + L  +M  K V+PD    S++
Sbjct: 308 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 367

Query: 373 VDLL 376
           ++ L
Sbjct: 368 INGL 371



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 180/333 (54%), Gaps = 7/333 (2%)

Query: 46  NINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA 105
            + P+V TYN L+  LC      EA  +  +M   G  P+ VT+N ++   C+ G++D A
Sbjct: 5   GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64

Query: 106 SRLLDLMVQR-DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
            R++ LM +  + +PN  T++++++G C  G++  A ++F  M   G   D VSYN L++
Sbjct: 65  ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 124

Query: 165 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAA 224
           GYCK   + E+L+++ EM  +G+ P VVT+ +L     +   +E A+ L  +M+   +  
Sbjct: 125 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 184

Query: 225 DTSTYNTFIDGLCKNGYIVE---AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           +  T+   IDG CK G++ +   AVE  R  GI   +  +  YN LI+G CK GR+++A 
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI---QPSVVCYNALINGYCKLGRMDLAR 241

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           EL R +  + +  DVVTY+ +I G C  G +D A  L   M +  V P+ I + +LI G 
Sbjct: 242 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 301

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
               + +   EL   M +  V PD    + ++D
Sbjct: 302 CEEKRLNDACELFENMLQLGVQPDEFTYTTLID 334



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 191/381 (50%), Gaps = 56/381 (14%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+YNT++ G CK G + ++ A+F +M    + PDVVT+ SLIH  C A +  +A  L
Sbjct: 114 PDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVAL 173

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M ++G++ + VTF  ++D  CK G +D+A   ++ M +  ++P+   Y+ L++G+C 
Sbjct: 174 VAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCK 233

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A EL   ME+   K D V+Y+ +I+GYCK   ++ A  L ++M+ KG+ P  +T
Sbjct: 234 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 293

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           Y++L  GL E  ++  A +LFE M +  V  D  TY T IDG CK G + +A+ L   + 
Sbjct: 294 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 353

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALEL--------------------------- 283
             G+L    D+  Y+ LI+GL KS R + A  L                           
Sbjct: 354 RKGVLP---DVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAE 410

Query: 284 -----------------------FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
                                  ++S+  R    D   Y+I+IHG C  G + KA     
Sbjct: 411 FKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHK 470

Query: 321 DMEENAVAPNVIIFVTLIHGF 341
            M  +  +PN    ++L+ G 
Sbjct: 471 QMLRSGFSPNSTSTISLVRGL 491



 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 164/298 (55%), Gaps = 1/298 (0%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+  GV P+V T+N+++  LC  G+++EA  ++  M      PNA TY+TL+  FC  G+
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 137 INRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           ++ AE +   M   G  K + V++N ++NG CK   +E A  ++ EMV +G+ P VV+YN
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           TL  G  ++  +  +L +F EM +  +  D  T+ + I   CK G + +AV L   +   
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
              ++   +  LIDG CK G L+ AL     + +  +   VV YN +I+G C  G+MD A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            +L  +ME   V P+V+ + T+I G+ ++       +L  KM +K V+PDA   S ++
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 298



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 125/272 (45%), Gaps = 50/272 (18%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY+TII G CK G +D A  L  +M  + + PD +TY+SLI GLC     N+A  
Sbjct: 253 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 312

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG-- 130
           LF  M+  GVQP   T+  ++D  CK G +++A  L D M+++ V P+  TYS L++G  
Sbjct: 313 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 372

Query: 131 ------------------------------------------------FCLTGKINRAEE 142
                                                           FC+ G +  A++
Sbjct: 373 KSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK 432

Query: 143 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 202
           ++ SM     K D   Y+ILI+G+C+   V +ALS +++M+  G  P   +  +L  GLF
Sbjct: 433 VYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLF 492

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           E   V  A    +++      AD       ID
Sbjct: 493 EEGMVVEADNAIQDLLTCCPLADAEASKALID 524



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 52/234 (22%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           ++GV  +P+  TY T+IDG CKEG V+KA +L  +M  + + PDVVTY+ LI+GL  +  
Sbjct: 319 QLGV--QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 376

Query: 67  WNEAKRL--------------------------------------------------FFE 76
             EA RL                                                  +  
Sbjct: 377 TKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQS 436

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+D+  +     +++++   C+ G + +A      M++    PN+ +  +L+ G    G 
Sbjct: 437 MLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGM 496

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +  A+     + +     D  +   LI+   K   V+  + +   M   G+ P+
Sbjct: 497 VVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 550


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  227 bits (579), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 122/359 (33%), Positives = 190/359 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   T   II+GLC+ G ++ A  +F  M    + P+ V Y +LI G      + EA R+
Sbjct: 444 PTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRI 503

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +GVQP V+ +N ++  LCK+ KM+EA   L  M++R ++PN +TY  L+ G+C 
Sbjct: 504 LKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCK 563

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G++  A+  F  M   G   +DV    LI+GYCK     EA S++R M+ + + P V T
Sbjct: 564 SGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRT 623

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  GL    +++ A++L  E     +  D  TYN+ I G CK G I +A +L   + 
Sbjct: 624 YSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMC 683

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +I  YN LI+GLCK+G +E A ELF  +P + L  + VTY  +I G C  G + 
Sbjct: 684 QKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLS 743

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           KA  LF +M    V P+  ++  LI G  +     K + L  +  +K     +S+ +++
Sbjct: 744 KAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALM 802



 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 196/362 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N  TYN ++ G+CK G ++KA AL  +M    I PD  TYN++I G     + +  K 
Sbjct: 373 KLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKD 432

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM    + P+  T  +I++ LC++G +++ASR+ ++MV   V+PNA  Y+TL+ G  
Sbjct: 433 LLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHV 492

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+   A  +   M+  G + D + YN +I G CK++++EEA     EM+ +G+KP V 
Sbjct: 493 QEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVY 552

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L  G  +  +++ A + F+EM    +A +       IDG CK G   EA  +FR +
Sbjct: 553 TYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCM 612

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D++ Y+ LI GL ++G+L+ A+EL      + LV DV TYN +I G C  G +
Sbjct: 613 LGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGI 672

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            KA  L   M +  ++PN+I +  LI+G  +  +  +  EL   +  K +  +A   + +
Sbjct: 673 GKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATI 732

Query: 373 VD 374
           +D
Sbjct: 733 ID 734



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 196/396 (49%), Gaps = 34/396 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ + YN++I GLCK   +++AK   ++M    + P+V TY +LIHG C + +   A R
Sbjct: 513 QPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADR 572

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM+  G+ P+ V    ++D  CK G   EA+ +   M+ R V P+  TYS L+ G  
Sbjct: 573 YFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLL 632

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A EL       G   D  +YN +I+G+CK   + +A  L+  M  KGI P ++
Sbjct: 633 RNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNII 692

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L  GL +  ++E A +LF+ +    +A +  TY T IDG CK+G + +A  LF  +
Sbjct: 693 TYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEM 752

Query: 253 GILKCELDIQAY----------------------------------NCLIDGLCKSGRLE 278
            +     D   Y                                  N L+DG CKSG++ 
Sbjct: 753 TLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVI 812

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +L   +  + +  D VTY I+I   C  G + +A   F+DM++  + PN + +  L+
Sbjct: 813 EANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALL 872

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            G+    + S++  L  +M  K + PD    S+++D
Sbjct: 873 SGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMID 908



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 197/369 (53%), Gaps = 1/369 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G    PN V    +IDG CKEG   +A ++F  M G +++PDV TY++LIHGL      
Sbjct: 578 LGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKL 637

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A  L  E +++G+ P V T+N I+   CK G + +A +L + M Q+ + PN  TY+ L
Sbjct: 638 QGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNAL 697

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++G C  G+I RA ELF  +   G  H+ V+Y  +I+GYCK+  + +A  L+ EM  KG+
Sbjct: 698 INGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGV 757

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P    Y+ L  G  +    E AL LF E  +   A+ TS+ N  +DG CK+G ++EA +
Sbjct: 758 PPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFAS-TSSLNALMDGFCKSGKVIEANQ 816

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +     + D   Y  LID  CK+G L+ A + F  + +R L+ + +TY  ++ G  
Sbjct: 817 LLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYN 876

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G+  +   LF +M    + P+ + +  +I   ++     K ++L+  M +K      +
Sbjct: 877 MAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKN 936

Query: 368 IVSMVVDLL 376
           +  +++D L
Sbjct: 937 VCHVLIDPL 945



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 193/370 (52%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N  I V  KP+T TYN +I+G  KE    + K L  +MK  N+ P   T   +I+GLC  
Sbjct: 400 NEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRH 459

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
               +A R+F  M+  GV+P+ V +  ++    + G+  EA R+L +M ++ V+P+   Y
Sbjct: 460 GSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCY 519

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           ++++ G C + K+  A++    M   G K +  +Y  LI+GYCK+ E++ A   ++EM+ 
Sbjct: 520 NSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLG 579

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
            GI P  V    L  G  +      A  +F  M    V  D  TY+  I GL +NG +  
Sbjct: 580 CGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQG 639

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A+EL           D+  YN +I G CK G +  A +L   + ++ +  +++TYN +I+
Sbjct: 640 AMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALIN 699

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           GLC  G++++A +LF  +    +A N + + T+I G+ +    SK   L  +M  K V P
Sbjct: 700 GLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPP 759

Query: 365 DASIVSMVVD 374
           D+ + S ++D
Sbjct: 760 DSFVYSALID 769



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 177/362 (48%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYN +I GLC+ G VD+A  L   M  + +  DV TY+ LI G        EAK
Sbjct: 267 CSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAK 326

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  EM  +G++P  V +  ++D   + G   EA R+ + M+ R V+ N FTY+ L+ G 
Sbjct: 327 LMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGV 386

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + +A+ L   M  +G K D  +YN +I GY K +       L  EM    + PT 
Sbjct: 387 CKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTA 446

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T   +  GL     +E A ++FE M    V  +   Y T I G  + G   EAV + + 
Sbjct: 447 YTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKV 506

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D+  YN +I GLCKS ++E A +    +  R L  +V TY  +IHG C  G+
Sbjct: 507 MDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGE 566

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           M  A   F +M    +APN ++   LI G+ +    ++   +   M  + V PD    S 
Sbjct: 567 MQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSA 626

Query: 372 VV 373
           ++
Sbjct: 627 LI 628



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 182/357 (50%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY  +I+   + G   + K L  +M+ +  +P +VTYN +I GLC A + +EA  L   M
Sbjct: 238 TYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLM 297

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
             +G+   V T+++++D   K  +  EA  +L+ M  + ++P    Y+ L+DGF   G  
Sbjct: 298 DKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDS 357

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A  +   M + G K +  +YN L+ G CK  ++E+A +L  EM+  GIKP   TYN +
Sbjct: 358 GEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNM 417

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G  +         L  EM++ ++     T    I+GLC++G I +A  +F  +  L  
Sbjct: 418 IEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGV 477

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           + +   Y  LI G  + GR + A+ + + + ++ +  DV+ YN +I GLC   +M++A D
Sbjct: 478 KPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKD 537

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             ++M E  + PNV  +  LIHG+ +  +         +M    + P+  + + ++D
Sbjct: 538 YLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALID 594



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 169/349 (48%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V +  +IDG  K+G  D+A + FL  K       ++  N L+  L  AN      R +  
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M++  V   V T+  +++   + G   E  RLL  M ++   P+  TY+ ++ G C  G+
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           ++ A EL   M+  G   D  +Y+ILI+G+ K K   EA  +  EM SKG+KP  V Y  
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G         A ++ EEM    V  +  TYN  + G+CK G + +A  L   + ++ 
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            + D Q YN +I+G  K        +L   + +  LV    T  ++I+GLC  G ++ A 
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDAS 466

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +F  M    V PN +I+ TLI G V+  +  + + +L  M +K V PD
Sbjct: 467 RVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPD 515



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 168/385 (43%), Gaps = 71/385 (18%)

Query: 7    EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            E G+V  P+  TYN+II G CK+G + KA  L   M  + I+P+++TYN+LI+GLC A +
Sbjct: 649  EKGLV--PDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGE 706

Query: 67   WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
               A+ LF  +  +G+  + VT+  I+D  CK+G + +A RL D M  + V P++F YS 
Sbjct: 707  IERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSA 766

Query: 127  L----------------------------------MDGFCLTGKINRAEELFGSMESMGC 152
            L                                  MDGFC +GK+  A +L   M     
Sbjct: 767  LIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHV 826

Query: 153  KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
            K D V+Y ILI+ +CK   ++EA   + +M  + + P  +TY  L  G     +      
Sbjct: 827  KPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFA 886

Query: 213  LFEEMQRDDVAADTSTYNTFIDG-----------------------------------LC 237
            LF+EM   D+  D  T++  ID                                    LC
Sbjct: 887  LFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLC 946

Query: 238  KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
            +  ++ E +++   +      L +   + L+    K+G+++ A  + +S+ R   V D  
Sbjct: 947  RKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDST 1006

Query: 298  TYNIMIHGLCNDGQMDKAHDLFLDM 322
              N +I+   +    + A D    M
Sbjct: 1007 ELNDLINVEQDSTDSENAGDFLKQM 1031



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 117/288 (40%), Gaps = 35/288 (12%)

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           +  L+DG+   G  + A   F   +  G     +  N L++   K  ++E     Y  M+
Sbjct: 169 FELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGML 228

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
              +   V TY  L    F     +   +L  EM+    +    TYN  I GLC+ G + 
Sbjct: 229 EANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVD 288

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL---------------------- 281
           EA EL + +       D+  Y+ LIDG  K  R   A                       
Sbjct: 289 EAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALI 348

Query: 282 ----------ELFR---SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVA 328
                     E FR    +  R +  ++ TYN ++ G+C  G M+KA  L  +M    + 
Sbjct: 349 DGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIK 408

Query: 329 PNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           P+   +  +I G+++    S+V +LL +MK+  ++P A    M+++ L
Sbjct: 409 PDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGL 456


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  227 bits (579), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 122/364 (33%), Positives = 203/364 (55%), Gaps = 5/364 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TY  +++GLCK G VD AK LF ++      P++V +N+LIHG       ++AK +
Sbjct: 320 PDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAV 375

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             +M+   G+ P V T+N ++    K G +  A  +L  M  +  +PN ++Y+ L+DGFC
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 435

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GKI+ A  +   M + G K + V +N LI+ +CK   + EA+ ++REM  KG KP V 
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N+L  GL E+ +++HAL L  +M  + V A+T TYNT I+   + G I EA +L   +
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 LD   YN LI GLC++G ++ A  LF  + R       ++ NI+I+GLC  G +
Sbjct: 556 VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMV 615

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A +   +M      P+++ F +LI+G  R  +    + +  K++ + + PD    + +
Sbjct: 616 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675

Query: 373 VDLL 376
           +  L
Sbjct: 676 MSWL 679



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 123/368 (33%), Positives = 187/368 (50%), Gaps = 36/368 (9%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNE 69
           + KP  V +NT+I G    G +D AKA+   M     I PDV TYNSLI+G         
Sbjct: 348 IPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGL 407

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +  +M ++G +P+V ++ +++D  CK GK+DEA  +L+ M    ++PN   ++ L+ 
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            FC   +I  A E+F  M   GCK D  ++N LI+G C+  E++ AL L R+M+S+G+  
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527

Query: 190 TVVTYNTL---FL--------------------------------GLFEIHQVEHALKLF 214
             VTYNTL   FL                                GL    +V+ A  LF
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           E+M RD  A    + N  I+GLC++G + EAVE  + + +     DI  +N LI+GLC++
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           GR+E  L +FR L    +  D VT+N ++  LC  G +  A  L  +  E+   PN   +
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707

Query: 335 VTLIHGFV 342
             L+   +
Sbjct: 708 SILLQSII 715



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 157/303 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN  +Y  ++DG CK G +D+A  +  +M  + + P+ V +N LI   C  +   EA 
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F EM  +G +P V TFN ++  LC+  ++  A  LL  M+   V  N  TY+TL++ F
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+I  A +L   M   G   D+++YN LI G C+  EV++A SL+ +M+  G  P+ 
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 599

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++ N L  GL     VE A++  +EM       D  T+N+ I+GLC+ G I + + +FR 
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L       D   +N L+  LCK G +  A  L         V +  T++I++  +     
Sbjct: 660 LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQET 719

Query: 312 MDK 314
           +D+
Sbjct: 720 LDR 722



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 171/343 (49%), Gaps = 12/343 (3%)

Query: 28  KEGFVDKAKALFLQMKG-ENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           K GF  +   L L+M+   +  P   +YN ++  L   N    A  +F++M+ + + P++
Sbjct: 158 KAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTL 217

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
            TF V+M   C   ++D A  LL  M +    PN+  Y TL+       ++N A +L   
Sbjct: 218 FTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEE 277

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M  MGC  D  ++N +I G CK   + EA  +   M+ +G  P  +TY  L  GL +I +
Sbjct: 278 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR 337

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA----VELFRTLGILKCELDIQ 262
           V+ A  LF  + + ++      +NT I G   +G + +A     ++  + GI+    D+ 
Sbjct: 338 VDAAKDLFYRIPKPEIV----IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP---DVC 390

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
            YN LI G  K G + +ALE+   +  +    +V +Y I++ G C  G++D+A+++  +M
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             + + PN + F  LI  F + ++  + +E+  +M  K   PD
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 175/364 (48%), Gaps = 5/364 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P   +YN +++ L        A  +F  M    I P + T+  ++   C  N+ + A 
Sbjct: 178 CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSAL 237

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +M   G  P+ V +  ++  L K  +++EA +LL+ M      P+A T++ ++ G 
Sbjct: 238 SLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 297

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +IN A ++   M   G   DD++Y  L+NG CK   V+ A  L+  +     KP +
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEI 353

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V +NTL  G     +++ A  +  +M     +  D  TYN+ I G  K G +  A+E+  
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C+ ++ +Y  L+DG CK G+++ A  +   +    L  + V +N +I   C + 
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++ +A ++F +M      P+V  F +LI G   +++    + LL  M  + V+ +    +
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533

Query: 371 MVVD 374
            +++
Sbjct: 534 TLIN 537



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 159/324 (49%), Gaps = 8/324 (2%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL-LDLM 112
           Y  LI  L    ++    RL  +M D+G+      F  IM +  K G   + +RL L++ 
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173

Query: 113 VQRDVRPNAFTYSTLMDGFCLTGKINR-AEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
                 P   +Y+ +++   ++G  ++ A  +F  M S        ++ +++  +C   E
Sbjct: 174 NVYSCEPTFKSYNVVLE-ILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           ++ ALSL R+M   G  P  V Y TL   L + ++V  AL+L EEM       D  T+N 
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            I GLCK   I EA ++   + I     D   Y  L++GLCK GR++ A +LF  +P+  
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-- 350

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDM-EENAVAPNVIIFVTLIHGFVRINKPSKV 350
              ++V +N +IHG    G++D A  +  DM     + P+V  + +LI+G+ +       
Sbjct: 351 --PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408

Query: 351 IELLHKMKEKKVMPDASIVSMVVD 374
           +E+LH M+ K   P+    +++VD
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVD 432


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  227 bits (579), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 128/371 (34%), Positives = 208/371 (56%), Gaps = 3/371 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E GV+  P+  TY  +I    + G +  A   F QM    + P+ + Y+SLI G C   +
Sbjct: 430 EQGVI--PDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGN 487

Query: 67  WNEAKRLFFEMMDQGV-QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             +AK L  EMM +G+ +P++V FN I++ LCK G++ EA  + D ++    RP+  T++
Sbjct: 488 LVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFN 547

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           +L+DG+ L GKI +A  +  +M S G + D VSYN LI+GYC+N  +++ L L+ EM+SK
Sbjct: 548 SLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSK 607

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G+KPT +TY  +  GLF   +   A K+  EM       D ST    + GLC+N    EA
Sbjct: 608 GVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEA 667

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           + +F+ LG +  + +I   N +ID + K  + E A ELF S+    LV +  TY +MI  
Sbjct: 668 IAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKN 727

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           L  +G +++A ++F  ME++  AP+  +   +I   +   +  K    + K+  K++  +
Sbjct: 728 LLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLE 787

Query: 366 ASIVSMVVDLL 376
           AS VS+++ L 
Sbjct: 788 ASTVSLLMALF 798



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 186/359 (51%), Gaps = 7/359 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GVV  P+ VTY +IID LCK   +DKA+ +  QM      P+ VTYN +IHG   +  W 
Sbjct: 257 GVV--PDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWK 314

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           E   +F EM  QG+ P++VT N  M  LCK+GK  EA+   D M  +  +PN  TYS L+
Sbjct: 315 ETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLL 374

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G+   G       LF SME  G   D   +NI+I+ Y K   ++E + ++ +M  +G+ 
Sbjct: 375 HGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVI 434

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P   TY  +      + ++  A+  F +M    +  +   Y++ I G C +G +V+A EL
Sbjct: 435 PDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKEL 494

Query: 249 FRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
              +   GI +   +I  +N +I+ LCK GR+  A ++F  +       DV+T+N +I G
Sbjct: 495 VSEMMSRGIPR--PNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDG 552

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
               G+++KA  +   M    + P+V+ + TLI G+ R  +    + L  +M  K V P
Sbjct: 553 YGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKP 611



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 174/359 (48%), Gaps = 3/359 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           V  P   TYN ++D  C+        ALF +     +  DV+  + L+  L HA   ++ 
Sbjct: 114 VALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDV 173

Query: 71  KRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD--VRPNAFTYSTL 127
             L    M + GV+P  +++N ++  LC++ +   A  LL  MV++     PN  TY+T+
Sbjct: 174 VNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTV 233

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G    G++++A  LF  M   G   D V+Y  +I+  CK + +++A  + R+M+S G 
Sbjct: 234 IHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGF 293

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P  VTYN +  G     Q +    +F EM    +  +  T N+++  LCK+G   EA E
Sbjct: 294 QPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAE 353

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            F ++     + ++  Y+ L+ G    G     L LF S+    +VAD   +NI+I    
Sbjct: 354 FFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYG 413

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             G MD+   +F  M+E  V P+   +  +I  F R+ + +  ++  ++M    + P+ 
Sbjct: 414 KRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEG 472



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 170/339 (50%), Gaps = 3/339 (0%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQ--GVQPSVVTFN 90
           D    L  +M    + PD ++YN+++  LC  +    A  L   M+ +  G  P+VVT+N
Sbjct: 172 DVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYN 231

Query: 91  VIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
            ++  L + G++ +A  L   M+Q+ V P+  TY++++D  C    +++AE +   M S 
Sbjct: 232 TVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISN 291

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G + + V+YN +I+GY  + + +E   ++REM S+G+ P +VT N+    L +  + + A
Sbjct: 292 GFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEA 351

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
            + F+ M       +  TY+  + G    G  V+ + LF ++       D + +N +ID 
Sbjct: 352 AEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDA 411

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
             K G ++  + +F  +  + ++ D  TY I+I      G++  A D F  M    + P 
Sbjct: 412 YGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPE 471

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            I++ +LI GF       K  EL+ +M  + + P  +IV
Sbjct: 472 GIVYHSLIQGFCMHGNLVKAKELVSEMMSRGI-PRPNIV 509



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 161/328 (49%), Gaps = 3/328 (0%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA-SR 107
           P V TYN L+   C          LF   +  G++  V+  ++++  L    + D+  + 
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM--ESMGCKHDDVSYNILING 165
           LL  M +  V P+  +Y+T++   C   +  RA +L  +M  +S GC  + V+YN +I+G
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
             +  EV +A +L+ EM+ +G+ P VVTY ++   L +   ++ A  +  +M  +    +
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
             TYN  I G   +G   E   +FR +       +I   N  +  LCK G+ + A E F 
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
           S+  +    ++VTY++++HG   +G      +LF  ME N +  +  +F  +I  + +  
Sbjct: 357 SMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRG 416

Query: 346 KPSKVIELLHKMKEKKVMPDASIVSMVV 373
              + + +  +M+E+ V+PDA    +V+
Sbjct: 417 MMDETMLIFTQMQEQGVIPDACTYGIVI 444



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 15/221 (6%)

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH-------ALKLFEEMQRDDVA 223
             E+A  L+ E++ + I     + N  F  L               A+ LF  + R++  
Sbjct: 52  STEDAHHLFDELLRQTIPVPERSLNGFFTALARAPSSAACRDGPSLAVALFNRICREEAR 111

Query: 224 ADTS-----TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +     TYN  +D  C+         LF        ++D+   + L+  L  + R +
Sbjct: 112 PRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSD 171

Query: 279 IALELF-RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM--EENAVAPNVIIFV 335
             + L    +P   +  D ++YN ++  LC D +  +A DL   M  +    +PNV+ + 
Sbjct: 172 DVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYN 231

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           T+IHG  R  + SK   L H+M ++ V+PD    + ++D L
Sbjct: 232 TVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDAL 272



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 44/101 (43%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY  +I  L KEG V++A  +F  M+     P     N +I  L    +  +A   
Sbjct: 716 PNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNY 775

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
            F++  + +     T +++M    + GK  E  +LL    Q
Sbjct: 776 MFKVDGKRISLEASTVSLLMALFSREGKYWEDVKLLPAKYQ 816


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  227 bits (579), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 118/362 (32%), Positives = 202/362 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VTYN+++ GLC+ G  DKA  +F +M    + PDV ++  LI G C   +  EA +
Sbjct: 223 KPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALK 282

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++ EM  +G++P +V+F+ ++    + GKMD A   L  M    + P+   Y+ ++ GFC
Sbjct: 283 IYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFC 342

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A  +   M   GC  D V+YN L+NG CK + + +A  L  EM  +G+ P + 
Sbjct: 343 RAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLC 402

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+ TL  G     +++ AL+LF+ M    +  D  TYNT IDG+C+ G + +A +L+  +
Sbjct: 403 TFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDM 462

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   +   Y+ LID  C+ G++E A      +  + ++ +++TYN +I G C  G +
Sbjct: 463 HSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNV 522

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            K       M  N V+P++I + TLIHG+++ +K     +LL+ M+++KV PD    +M+
Sbjct: 523 SKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNML 582

Query: 373 VD 374
           ++
Sbjct: 583 IN 584



 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/352 (34%), Positives = 193/352 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+N ++D   + G  + A AL   M  + + P +VTYNS++ GLC +  W++A  +
Sbjct: 189 PDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEV 248

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM D GV P V +F +++   C+ G+++EA ++   M  R ++P+  ++S L+  F  
Sbjct: 249 FKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFAR 308

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A      M   G   D V Y ++I G+C+   + +AL +  EMV  G  P VVT
Sbjct: 309 RGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVT 368

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL +  ++  A  L  EM+   V  D  T+ T I G C  G + +A++LF T+ 
Sbjct: 369 YNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 428

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +   DI  YN LIDG+C+ G L+ A +L+  +  R +  + VTY+I+I   C  GQ++
Sbjct: 429 NQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVE 488

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            A     +M    + PN++ + ++I G+ R    SK  + L KM   KV PD
Sbjct: 489 DAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD 540



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 195/353 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V+++ +I    + G +D A A   +M+   + PD V Y  +I G C A   ++A R
Sbjct: 293 KPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALR 352

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM+  G  P VVT+N +++ LCK  ++ +A  LL+ M +R V P+  T++TL+ G+C
Sbjct: 353 VRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYC 412

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + GK+++A +LF +M +   + D V+YN LI+G C+  ++++A  L+ +M S+ I P  V
Sbjct: 413 IEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHV 472

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L     E  QVE A    +EM    +  +  TYN+ I G C++G + +  +  + +
Sbjct: 473 TYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM 532

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            + K   D+  YN LI G  K  ++  A +L   + +  +  DVVTYN++I+G    G +
Sbjct: 533 MVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNV 592

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +A  +F  M    + P+   ++++I+G V      +  +L  +M ++   PD
Sbjct: 593 QEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 183/330 (55%), Gaps = 4/330 (1%)

Query: 48  NPDVVTY--NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA 105
           N +V TY  N ++H  C A ++++   +  EM  + V P VVT NV++D   + G  + A
Sbjct: 151 NSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 210

Query: 106 SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILING 165
             L+D MV + ++P   TY++++ G C +G  ++A E+F  M+  G   D  S+ ILI G
Sbjct: 211 MALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGG 270

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH-QVEHALKLFEEMQRDDVAA 224
           +C+  E+EEAL +Y+EM  +GIKP +V+++ L +GLF    +++HA+    EM+   +  
Sbjct: 271 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCL-IGLFARRGKMDHAMAYLREMRCFGLVP 329

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           D   Y   I G C+ G + +A+ +   +    C  D+  YN L++GLCK  RL  A  L 
Sbjct: 330 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 389

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
             +  R +  D+ T+  +IHG C +G++DKA  LF  M    + P+++ + TLI G  R 
Sbjct: 390 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 449

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
               K  +L   M  +++ P+    S+++D
Sbjct: 450 GDLDKANDLWDDMHSREIFPNHVTYSILID 479



 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 182/351 (51%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           NT T N ++   CK    DK  A+  +M+   + PDVVT+N ++     A D   A  L 
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 214

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M+ +G++P +VT+N ++  LC++G  D+A  +   M    V P+  +++ L+ GFC  
Sbjct: 215 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 274

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+I  A +++  M   G K D VS++ LI  + +  +++ A++  REM   G+ P  V Y
Sbjct: 275 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 334

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             +  G      +  AL++ +EM       D  TYNT ++GLCK   +++A  L   +  
Sbjct: 335 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 394

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D+  +  LI G C  G+L+ AL+LF ++  + L  D+VTYN +I G+C  G +DK
Sbjct: 395 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 454

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           A+DL+ DM    + PN + +  LI       +       L +M  K ++P+
Sbjct: 455 ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 505



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 160/288 (55%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G  C P+ VTYNT+++GLCKE  +  A+ L  +M+   + PD+ T+ +LIHG C     
Sbjct: 358 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKL 417

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A +LF  M++Q ++P +VT+N ++D +C+ G +D+A+ L D M  R++ PN  TYS L
Sbjct: 418 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 477

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D  C  G++  A      M + G   + ++YN +I GYC++  V +     ++M+   +
Sbjct: 478 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 537

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P ++TYNTL  G  +  ++  A KL   M+++ V  D  TYN  I+G   +G + EA  
Sbjct: 538 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 597

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           +F  +     E D   Y  +I+G   +G  + A +L   + +R    D
Sbjct: 598 IFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/366 (24%), Positives = 169/366 (46%), Gaps = 35/366 (9%)

Query: 44  GENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMD 103
           G +  P    ++ LI     +    EA   F  ++D  V       N ++  L + G   
Sbjct: 79  GSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPH 138

Query: 104 EASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILI 163
            A+    L+   +   N +T + ++  +C   + ++ + +   ME      D V++N+++
Sbjct: 139 LAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMV 198

Query: 164 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVA 223
           +   +  + E A++L   MVSKG+KP +VTYN++  GL      + A ++F+EM    VA
Sbjct: 199 DARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVA 258

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL 283
            D  ++   I G C+ G I EA+++++ +     + D+ +++CLI    + G+++ A+  
Sbjct: 259 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 318

Query: 284 FRSL------PRRVL-----------------------------VADVVTYNIMIHGLCN 308
            R +      P  V+                             + DVVTYN +++GLC 
Sbjct: 319 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 378

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           + ++  A  L  +M E  V P++  F TLIHG+    K  K ++L   M  +++ PD   
Sbjct: 379 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 438

Query: 369 VSMVVD 374
            + ++D
Sbjct: 439 YNTLID 444



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 80/143 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +TYN+II G C+ G V K +    +M    ++PD++TYN+LIHG    +  ++A +L
Sbjct: 504 PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKL 563

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  + VQP VVT+N++++    +G + EA  + + M  + + P+ +TY ++++G   
Sbjct: 564 LNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVT 623

Query: 134 TGKINRAEELFGSMESMGCKHDD 156
            G    A +L   M   G   DD
Sbjct: 624 AGNSKEAFQLHDEMLQRGFAPDD 646



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 12/224 (5%)

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +++LI  Y ++++  EA   +R ++   +       N L   L        A   +  + 
Sbjct: 89  FDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYRLVF 148

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL-----KCEL-DIQAYNCLIDGLC 272
             +   +T T N  +   CK      A+E  +   ++     +C   D+  +N ++D   
Sbjct: 149 SSNSEVNTYTLNIMVHNYCK------ALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARF 202

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           ++G  E A+ L  S+  + L   +VTYN ++ GLC  G  DKA ++F +M++  VAP+V 
Sbjct: 203 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 262

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            F  LI GF R+ +  + +++  +M+ + + PD    S ++ L 
Sbjct: 263 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLF 306


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  227 bits (579), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 127/377 (33%), Positives = 208/377 (55%), Gaps = 6/377 (1%)

Query: 4   GNGEIGVVCKP----NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIH 59
           G G +G+V K     N    N ++ GLC+ G V +A  L  +M  ++++PD+V+YN+LI+
Sbjct: 128 GFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLIN 187

Query: 60  GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
           GLC A    EA  L  EM   G  P+ VT   +MD LCK+G+MDEA  LL+ M ++    
Sbjct: 188 GLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDA 247

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           +   Y TL+ GFC  G ++R +ELF  M   G   + V+Y+ L++G C+  + +EA ++ 
Sbjct: 248 DVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVL 307

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
             M   GI P VVTY  L  GL +  +  HA+ L   M          TYN  + GLCK 
Sbjct: 308 NAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKE 367

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL--PRRVLVADVV 297
           G +++A ++ R +     + D+  YN L+ GLC  G+++ AL+LF S+      L  +V 
Sbjct: 368 GLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVF 427

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           T+N++I GLC +G++ KA  +   M +     N++ +  L+ G ++  K  + +EL  ++
Sbjct: 428 TFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQV 487

Query: 358 KEKKVMPDASIVSMVVD 374
            +   +P++   S+++D
Sbjct: 488 LDLGFVPNSFTYSILID 504



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 212/434 (48%), Gaps = 72/434 (16%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + V Y T+I G C  G +D+ K LF +M G+ I+ +VVTY+ L+HGLC    W EA  + 
Sbjct: 248 DVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVL 307

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP--------------- 119
             M + G+ P VVT+  ++D LCK+G+   A  LL+LMV++   P               
Sbjct: 308 NAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKE 367

Query: 120 ----NAF----------------TYSTLMDGFCLTGKINRAEELFGSM-ESMGCKHDDV- 157
               +AF                TY+TLM G C  GK++ A +LF SM ++  C   +V 
Sbjct: 368 GLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVF 427

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE-- 215
           ++N+LI G CK   + +A+ ++R+MV KG    +VTYN L  G  +  +++ A++L++  
Sbjct: 428 TFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQV 487

Query: 216 ---------------------------------EMQRDDVAADTSTYNTFIDGLCKNGYI 242
                                            EM+   +      YNT +  LCK G +
Sbjct: 488 LDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSL 547

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            +A  LF+ +G   CE DI ++N +IDG  K+G  +   EL   +    L  D +T++ +
Sbjct: 548 EQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTL 607

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I+ L   G++D+A      M  +   P+ +++ +L+ G       +++I LLH+M  K  
Sbjct: 608 INRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGT 667

Query: 363 MPDASIVSMVVDLL 376
           + D  IVS ++  L
Sbjct: 668 VLDRKIVSTILTCL 681



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 156/332 (46%)

Query: 34  KAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIM 93
           +A +LF      N+ P   T N L+  L  + ++  A  ++  M    V PS  + + ++
Sbjct: 57  EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALI 116

Query: 94  DELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCK 153
           +      K      ++ L+++R    N F  + ++ G C  G +  A  L   M      
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVS 176

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            D VSYN LING CK K+++EA+ L  EM + G  P  VT  TL  GL +  +++ A++L
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
            E M++    AD   Y T I G C NG +    ELF  +       ++  Y+CL+ GLC+
Sbjct: 237 LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 296

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
            G+ + A  +  ++    +  DVVTY  +I GLC DG+   A DL   M E    P+ + 
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 356

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +  L+ G  +        ++L  M EK    D
Sbjct: 357 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKAD 388



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 132/262 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  T+N +I GLCKEG + KA  +  +M  +    ++VTYN L+ G   A    EA  
Sbjct: 423 EPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAME 482

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L+ +++D G  P+  T+++++D  CK   ++ A  L   M    + P  F Y+TLM   C
Sbjct: 483 LWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLC 542

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G + +A+ LF  M +  C+ D +S+N +I+G  K  + +    L  +MV  G++P  +
Sbjct: 543 KEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDAL 602

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++TL   L ++ +++ A    E M       D   Y++ + GL   G   E + L   +
Sbjct: 603 TFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQM 662

Query: 253 GILKCELDIQAYNCLIDGLCKS 274
                 LD +  + ++  LC S
Sbjct: 663 AAKGTVLDRKIVSTILTCLCHS 684



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 145/319 (45%), Gaps = 37/319 (11%)

Query: 58  IHGLCHA--NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           +  LC    + + EA  LF   +D  + PS  T N ++D L ++     A  +   M   
Sbjct: 44  LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103

Query: 116 DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
           DV P+  + S L++ F    K      + G +   G   +    NI++ G C+N      
Sbjct: 104 DVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNG----- 158

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
                                   G+FE      A+ L  EM R  V+ D  +YNT I+G
Sbjct: 159 ------------------------GVFE------AMGLIREMGRKSVSPDIVSYNTLING 188

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           LCK   + EAV L   +    C  +      L+DGLCK GR++ A+EL  ++ ++   AD
Sbjct: 189 LCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDAD 248

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           VV Y  +I G CN+G +D+  +LF +M    ++ NV+ +  L+HG  R+ +  +   +L+
Sbjct: 249 VVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLN 308

Query: 356 KMKEKKVMPDASIVSMVVD 374
            M E  + PD    + ++D
Sbjct: 309 AMAEHGIHPDVVTYTGLID 327



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 115/238 (48%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N VTYN ++ G  K G + +A  L+ Q+      P+  TY+ LI G C     N AK LF
Sbjct: 460 NLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLF 519

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM   G+ P++  +N +M  LCK G +++A  L   M   +  P+  +++T++DG    
Sbjct: 520 CEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKA 579

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G     +EL   M  MG + D ++++ LIN   K  E++EA S    MV+ G  P  + Y
Sbjct: 580 GDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVY 639

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           ++L  GL         + L  +M       D    +T +  LC +   V+ +EL  T 
Sbjct: 640 DSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTF 697



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 9/203 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    YNT++  LCKEG +++AK+LF +M   N  PD++++N++I G   A D+   K L
Sbjct: 529 PALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKEL 588

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M++ G++P  +TF+ +++ L K G++DEA   L+ MV     P+A  Y +L+ G   
Sbjct: 589 QMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSS 648

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYC---KNKEVEEALSLYREMVSKGIKPT 190
            G       L   M + G   D    + ++   C   +  +V E L  + +  S+G    
Sbjct: 649 KGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGAS-- 706

Query: 191 VVTYNTLFLGLFEIHQVEHALKL 213
            ++ N L   L ++HQ    L+L
Sbjct: 707 -ISCNEL---LMQLHQSHPKLQL 725



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 6/132 (4%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M N N      C+P+ +++NT+IDG  K G     K L ++M    + PD +T+++LI+ 
Sbjct: 557 MGNAN------CEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINR 610

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           L    + +EAK     M+  G  P  + ++ ++  L   G   E   LL  M  +    +
Sbjct: 611 LSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLD 670

Query: 121 AFTYSTLMDGFC 132
               ST++   C
Sbjct: 671 RKIVSTILTCLC 682



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 2/108 (1%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+G+  +P+ +T++T+I+ L K G +D+AK+   +M      PD + Y+SL+ GL    D
Sbjct: 594 EMGL--RPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGD 651

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
             E   L  +M  +G        + I+  LC + +  +   LL    Q
Sbjct: 652 TTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQ 699


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  227 bits (578), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 199/360 (55%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + VTYNT+I+  C+EG V++A  L        + P ++TYN++++GLC    ++ AK + 
Sbjct: 291 DIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVL 350

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+  G+ P+  T+N ++ E+C+   + EA  + D M +R V P+  ++S+L+      
Sbjct: 351 IEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARN 410

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G + +A   F  ME  G   D+V Y ILI+G+C+N  + +AL +  EM+++G    VVTY
Sbjct: 411 GHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTY 470

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           NT   GL +      A  LF EM    +  D  T+ T I G CK+G + +A+ LF  +  
Sbjct: 471 NTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVR 530

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + D   YN LIDG CK+G +  A EL+  + R+ ++ D ++Y  +++G C+ G + +
Sbjct: 531 TNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPE 590

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A +L   M E  + PN++   TLI G+ R     K  E L KM    ++PD+   + ++D
Sbjct: 591 ALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLID 650



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 118/348 (33%), Positives = 192/348 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  +TYN I+ GLCK G  D+AK + ++M    + P+  TYN+L+  +C  ++  EA+ 
Sbjct: 324 EPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQE 383

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM  +GV P +V+F+ ++  L +NG + +A      M +  + P+   Y+ L+DGFC
Sbjct: 384 IFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFC 443

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A ++   M + GC  D V+YN  +NG CK K   +A  L+ EMV +G+ P   
Sbjct: 444 RNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFY 503

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+ TL  G  +   ++ AL LFE M R ++  D  TYNT IDG CK G +  A EL+  +
Sbjct: 504 TFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDM 563

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D  +Y  +++G C SG L  AL L   +  + +  ++VT N +I G C  G M
Sbjct: 564 IRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDM 623

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            KA++    M  N + P+   + TLI G+++     K   L+++M+++
Sbjct: 624 PKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKR 671



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/351 (34%), Positives = 181/351 (51%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T N +++ LCK+   +        M+G+ +  D+VTYN+LI+  C      EA +L 
Sbjct: 256 NVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLL 315

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
                +G++P ++T+N I+  LCK GK D A  +L  M+Q  + PNA TY+TL+   C  
Sbjct: 316 NSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRR 375

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
             I  A+E+F  M   G   D VS++ LI    +N  + +AL  +REM   GI P  V Y
Sbjct: 376 DNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIY 435

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  G      +  ALK+ +EM       D  TYNTF++GLCK     +A  LF  +  
Sbjct: 436 TILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVE 495

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D   +  LI G CK G ++ AL LF ++ R  L  D VTYN +I G C  G+M +
Sbjct: 496 RGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGR 555

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           A +L+ DM    + P+ I + T+++GF       + + L  +M EK + P+
Sbjct: 556 AKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPN 606



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 180/346 (52%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N ++ GL + G+VD A  ++ ++    I  +V T N +++ LC    +        +M  
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
           +GV   +VT+N +++  C+ G ++EA +LL+    R + P   TY+ ++ G C  GK +R
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDR 345

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A+++   M  +G   +  +YN L+   C+   + EA  ++ EM  +G+ P +V++++L  
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIG 405

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
            L     +  AL  F EM+R  +  D   Y   IDG C+NG + +A+++   +    C +
Sbjct: 406 VLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM 465

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           D+  YN  ++GLCK      A  LF  +  R +V D  T+  +I G C DG MDKA +LF
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             M    + P+ + + TLI GF +  +  +  EL   M  K ++PD
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPD 571



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 192/355 (54%), Gaps = 6/355 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+++++I  L + G + +A   F +M+   I PD V Y  LI G C     ++A ++
Sbjct: 395 PDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKM 454

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+ +G    VVT+N  ++ LCK     +A  L + MV+R + P+ +T++TL+ G+C 
Sbjct: 455 RDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCK 514

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +++A  LF +M     K D V+YN LI+G+CK  E+  A  L+ +M+ K I P  ++
Sbjct: 515 DGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHIS 574

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           Y T+  G      +  AL L ++M    +  +  T NT I G C++G + +A E    + 
Sbjct: 575 YGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMI 634

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             GI+    D  +YN LIDG  K   LE A  L   + +R L  +++TYN++++G C +G
Sbjct: 635 SNGIIP---DSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEG 691

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +M +A  +   M E  + P+   + +LI+G V  +   +      +M ++ ++PD
Sbjct: 692 KMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 151/284 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  + VTYNT ++GLCK+     A  LF +M    + PD  T+ +LI G C   + ++A 
Sbjct: 463 CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKAL 522

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M+   ++P  VT+N ++D  CK G+M  A  L D M+++D+ P+  +Y T+++GF
Sbjct: 523 NLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGF 582

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +G +  A  L   M   G + + V+ N LI GYC++ ++ +A     +M+S GI P  
Sbjct: 583 CSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDS 642

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +YNTL  G  +   +E A  L  EM++  +  +  TYN  ++G C  G + EA ++ R 
Sbjct: 643 FSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRK 702

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           +  +    D   Y+ LI+G      ++ A      + +R LV D
Sbjct: 703 MIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 180/369 (48%), Gaps = 7/369 (1%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G +G++       Y+ ++    +   + +    F  ++ + ++  +   N L+ GL    
Sbjct: 184 GSVGLI-------YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTG 236

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             + A  ++ E++  G++ +V T N++++ LCK+ K +     L  M  + V  +  TY+
Sbjct: 237 WVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYN 296

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL++ +C  G +  A +L  S  S G +   ++YN ++ G CK  + + A  +  EM+  
Sbjct: 297 TLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL 356

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G+ P   TYNTL + +     +  A ++F+EM R  V  D  ++++ I  L +NG++ +A
Sbjct: 357 GLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQA 416

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           +  FR +       D   Y  LIDG C++G L  AL++   +  R    DVVTYN  ++G
Sbjct: 417 LMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNG 476

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC       A  LF +M E  + P+   F TLI G+ +     K + L   M    + PD
Sbjct: 477 LCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPD 536

Query: 366 ASIVSMVVD 374
               + ++D
Sbjct: 537 KVTYNTLID 545



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 108/218 (49%)

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y++L+  Y + K++ E    ++ +  KG+  ++   N L  GL     V+ A +++ E+ 
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
           R  +  +  T N  ++ LCK+      +     +       DI  YN LI+  C+ G +E
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +L  S   R +   ++TYN +++GLC  G+ D+A D+ ++M +  + PN   + TL+
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               R +   +  E+  +M  + V+PD    S ++ +L
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVL 407



 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 77/144 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VT NT+I G C+ G + KA     +M    I PD  +YN+LI G     +  +A  
Sbjct: 604 RPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFI 663

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  +G+Q +++T+N+I++  C  GKM EA ++L  M++  + P+  TYS+L++G  
Sbjct: 664 LINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHV 723

Query: 133 LTGKINRAEELFGSMESMGCKHDD 156
               +  A      M   G   DD
Sbjct: 724 SQDNMKEAFRFHDEMLQRGLVPDD 747


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  227 bits (578), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 118/362 (32%), Positives = 202/362 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VTYN+++ GLC+ G  DKA  +F +M    + PDV ++  LI G C   +  EA +
Sbjct: 162 KPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALK 221

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++ EM  +G++P +V+F+ ++    + GKMD A   L  M    + P+   Y+ ++ GFC
Sbjct: 222 IYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFC 281

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A  +   M   GC  D V+YN L+NG CK + + +A  L  EM  +G+ P + 
Sbjct: 282 RAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLC 341

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+ TL  G     +++ AL+LF+ M    +  D  TYNT IDG+C+ G + +A +L+  +
Sbjct: 342 TFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDM 401

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   +   Y+ LID  C+ G++E A      +  + ++ +++TYN +I G C  G +
Sbjct: 402 HSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNV 461

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            K       M  N V+P++I + TLIHG+++ +K     +LL+ M+++KV PD    +M+
Sbjct: 462 SKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNML 521

Query: 373 VD 374
           ++
Sbjct: 522 IN 523



 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/352 (34%), Positives = 193/352 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+N ++D   + G  + A AL   M  + + P +VTYNS++ GLC +  W++A  +
Sbjct: 128 PDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEV 187

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM D GV P V +F +++   C+ G+++EA ++   M  R ++P+  ++S L+  F  
Sbjct: 188 FKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFAR 247

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A      M   G   D V Y ++I G+C+   + +AL +  EMV  G  P VVT
Sbjct: 248 RGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVT 307

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL +  ++  A  L  EM+   V  D  T+ T I G C  G + +A++LF T+ 
Sbjct: 308 YNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 367

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +   DI  YN LIDG+C+ G L+ A +L+  +  R +  + VTY+I+I   C  GQ++
Sbjct: 368 NQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVE 427

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            A     +M    + PN++ + ++I G+ R    SK  + L KM   KV PD
Sbjct: 428 DAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD 479



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 195/353 (55%), Gaps = 4/353 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V+++ +I    + G +D A A   +M+   + PD V Y  +I G C A   ++A R
Sbjct: 232 KPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALR 291

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM+  G  P VVT+N +++ LCK  ++ +A  LL+ M +R V P+  T++TL+ G+C
Sbjct: 292 VRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYC 351

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + GK+++A +LF +M +   + D V+YN LI+G C+  ++++A  L+ +M S+ I P  V
Sbjct: 352 IEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHV 411

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L     E  QVE A    +EM    +  +  TYN+ I G C++G + +  +  + +
Sbjct: 412 TYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM 471

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            + K   D+  YN LI G  K  ++  A +L   + +  +  DVVTYN++I+G    G +
Sbjct: 472 MVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNV 531

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI----ELLHKMKEKK 361
            +A  +F  M    + P+   ++++I+G V      +      E+L + KEK+
Sbjct: 532 QEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKEKR 584



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 183/330 (55%), Gaps = 4/330 (1%)

Query: 48  NPDVVTY--NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA 105
           N +V TY  N ++H  C A ++++   +  EM  + V P VVT NV++D   + G  + A
Sbjct: 90  NSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 149

Query: 106 SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILING 165
             L+D MV + ++P   TY++++ G C +G  ++A E+F  M+  G   D  S+ ILI G
Sbjct: 150 MALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGG 209

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH-QVEHALKLFEEMQRDDVAA 224
           +C+  E+EEAL +Y+EM  +GIKP +V+++ L +GLF    +++HA+    EM+   +  
Sbjct: 210 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCL-IGLFARRGKMDHAMAYLREMRCFGLVP 268

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           D   Y   I G C+ G + +A+ +   +    C  D+  YN L++GLCK  RL  A  L 
Sbjct: 269 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 328

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
             +  R +  D+ T+  +IHG C +G++DKA  LF  M    + P+++ + TLI G  R 
Sbjct: 329 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 388

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
               K  +L   M  +++ P+    S+++D
Sbjct: 389 GDLDKANDLWDDMHSREIFPNHVTYSILID 418



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 182/351 (51%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           NT T N ++   CK    DK  A+  +M+   + PDVVT+N ++     A D   A  L 
Sbjct: 94  NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 153

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M+ +G++P +VT+N ++  LC++G  D+A  +   M    V P+  +++ L+ GFC  
Sbjct: 154 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 213

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+I  A +++  M   G K D VS++ LI  + +  +++ A++  REM   G+ P  V Y
Sbjct: 214 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 273

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             +  G      +  AL++ +EM       D  TYNT ++GLCK   +++A  L   +  
Sbjct: 274 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 333

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D+  +  LI G C  G+L+ AL+LF ++  + L  D+VTYN +I G+C  G +DK
Sbjct: 334 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 393

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           A+DL+ DM    + PN + +  LI       +       L +M  K ++P+
Sbjct: 394 ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 444



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 93/283 (32%), Positives = 159/283 (56%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G  C P+ VTYNT+++GLCKE  +  A+ L  +M+   + PD+ T+ +LIHG C     
Sbjct: 297 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKL 356

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A +LF  M++Q ++P +VT+N ++D +C+ G +D+A+ L D M  R++ PN  TYS L
Sbjct: 357 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 416

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D  C  G++  A      M + G   + ++YN +I GYC++  V +     ++M+   +
Sbjct: 417 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 476

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P ++TYNTL  G  +  ++  A KL   M+++ V  D  TYN  I+G   +G + EA  
Sbjct: 477 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 536

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           +F  +     E D   Y  +I+G   +G  + A +L   + +R
Sbjct: 537 IFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 579



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/366 (24%), Positives = 169/366 (46%), Gaps = 35/366 (9%)

Query: 44  GENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMD 103
           G +  P    ++ LI     +    EA   F  ++D  V       N ++  L + G   
Sbjct: 18  GSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPH 77

Query: 104 EASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILI 163
            A+    L+   +   N +T + ++  +C   + ++ + +   ME      D V++N+++
Sbjct: 78  LAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMV 137

Query: 164 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVA 223
           +   +  + E A++L   MVSKG+KP +VTYN++  GL      + A ++F+EM    VA
Sbjct: 138 DARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVA 197

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL 283
            D  ++   I G C+ G I EA+++++ +     + D+ +++CLI    + G+++ A+  
Sbjct: 198 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 257

Query: 284 FRSL------PRRVL-----------------------------VADVVTYNIMIHGLCN 308
            R +      P  V+                             + DVVTYN +++GLC 
Sbjct: 258 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 317

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           + ++  A  L  +M E  V P++  F TLIHG+    K  K ++L   M  +++ PD   
Sbjct: 318 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 377

Query: 369 VSMVVD 374
            + ++D
Sbjct: 378 YNTLID 383



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 139/295 (47%)

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           + +   ++     P    F++++    ++ K  EA     L++   V   A   + L+  
Sbjct: 10  REIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAA 69

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               G  + A + +  + S   + +  + NI+++ YCK  E ++  ++  EM  + + P 
Sbjct: 70  LSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPD 129

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVT+N +    F     E A+ L + M    +     TYN+ + GLC++G   +A E+F+
Sbjct: 130 VVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFK 189

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +       D++++  LI G C+ G +E AL++++ +  R +  D+V+++ +I      G
Sbjct: 190 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRG 249

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +MD A     +M    + P+ +I+  +I GF R    S  + +  +M     +PD
Sbjct: 250 KMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPD 304



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 12/224 (5%)

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +++LI  Y ++++  EA   +R ++   +       N L   L        A   +  + 
Sbjct: 28  FDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYRLVF 87

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL-----KCEL-DIQAYNCLIDGLC 272
             +   +T T N  +   CK      A+E  +   ++     +C   D+  +N ++D   
Sbjct: 88  SSNSEVNTYTLNIMVHNYCK------ALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARF 141

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           ++G  E A+ L  S+  + L   +VTYN ++ GLC  G  DKA ++F +M++  VAP+V 
Sbjct: 142 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 201

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            F  LI GF R+ +  + +++  +M+ + + PD    S ++ L 
Sbjct: 202 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLF 245


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  227 bits (578), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 128/376 (34%), Positives = 206/376 (54%), Gaps = 15/376 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VT+N++++GLCK G ++ A+ +F +M  E + PDVV+YN+L+ G C     +E+  
Sbjct: 220 KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLA 279

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM  +G+ P VVTF  ++   CK G +++A  L+  M +R +R N  T++ L+DGFC
Sbjct: 280 VFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFC 339

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A      M   G +   V YN LINGYCK   ++ A  L REM +K +KP VV
Sbjct: 340 KKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVV 399

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+T+  G  ++  ++ A +L ++M +  V  D  TY++ I GLC+   + +A ELF  +
Sbjct: 400 TYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 459

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             L  + D   Y  LIDG CK G +E AL L   + R+ ++ DVVTY+++I+GL    + 
Sbjct: 460 LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSART 519

Query: 313 DKAHDLFLDMEENAVAPNVIIF---------------VTLIHGFVRINKPSKVIELLHKM 357
            +AH L   +      P+ I +               V L+ GF       +  ++   M
Sbjct: 520 KEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSM 579

Query: 358 KEKKVMPDASIVSMVV 373
            ++    D S+ S+++
Sbjct: 580 LDRNWKLDGSVYSILI 595



 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 122/361 (33%), Positives = 202/361 (55%), Gaps = 7/361 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDW 67
           G  C PN VTYNT++   C+ G +D A+ +   M+ E N  P++VT+NS+++GLC A   
Sbjct: 180 GAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRM 239

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A+++F EM+ +G+ P VV++N ++   CK G + E+  +   M QR + P+  T+++L
Sbjct: 240 EGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSL 299

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +   C  G + +A  L   M   G + ++V++  LI+G+CK   +++AL    EM   GI
Sbjct: 300 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 359

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P+VV YN L  G  ++ +++ A +L  EM+   V  D  TY+T I G CK G +  A +
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419

Query: 248 LFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           L + +   G+L    D   Y+ LI GLC+  RL  A ELF ++ +  +  D  TY  +I 
Sbjct: 420 LNQKMLKKGVLP---DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLID 476

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G C +G ++KA  L  +M    V P+V+ +  LI+G  +  +  +   LL K+  +  +P
Sbjct: 477 GHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVP 536

Query: 365 D 365
           D
Sbjct: 537 D 537



 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 205/364 (56%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN ++  LC  G +++A  +   M+G    P+ VTYN+L+   C A + + A+R+
Sbjct: 150 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 209

Query: 74  FFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              M ++G  +P++VTFN +++ LCK G+M+ A ++ D MV+  + P+  +Y+TL+ G+C
Sbjct: 210 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 269

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ +  +F  M   G   D V++  LI+  CK   +E+A++L  +M  +G++   V
Sbjct: 270 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 329

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+  L  G  +   ++ AL   EEM++  +      YN  I+G CK G +  A EL R +
Sbjct: 330 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 389

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + + D+  Y+ +I G CK G L+ A +L + + ++ ++ D +TY+ +I GLC + ++
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 449

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A +LF +M +  V P+   + TLI G  +     K + L  +M  K V+PD    S++
Sbjct: 450 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509

Query: 373 VDLL 376
           ++ L
Sbjct: 510 INGL 513



 Score =  211 bits (536), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 192/365 (52%), Gaps = 8/365 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   YN ++  L  +  +  A+     M    + P+V TYN L+  LC      EA  +
Sbjct: 116 PSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR-DVRPNAFTYSTLMDGFC 132
             +M   G  P+ VT+N ++   C+ G++D A R++ LM +  + +PN  T++++++G C
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A ++F  M   G   D VSYN L++GYCK   + E+L+++ EM  +G+ P VV
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE---AVELF 249
           T+ +L     +   +E A+ L  +M+   +  +  T+   IDG CK G++ +   AVE  
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           R  GI   +  +  YN LI+G CK GR+++A EL R +  + +  DVVTY+ +I G C  
Sbjct: 355 RKCGI---QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G +D A  L   M +  V P+ I + +LI G     + +   EL   M +  V PD    
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 370 SMVVD 374
           + ++D
Sbjct: 472 TTLID 476



 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 191/381 (50%), Gaps = 56/381 (14%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+YNT++ G CK G + ++ A+F +M    + PDVVT+ SLIH  C A +  +A  L
Sbjct: 256 PDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVAL 315

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M ++G++ + VTF  ++D  CK G +D+A   ++ M +  ++P+   Y+ L++G+C 
Sbjct: 316 VAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCK 375

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A EL   ME+   K D V+Y+ +I+GYCK   ++ A  L ++M+ KG+ P  +T
Sbjct: 376 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 435

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           Y++L  GL E  ++  A +LFE M +  V  D  TY T IDG CK G + +A+ L   + 
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 495

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALEL--------------------------- 283
             G+L    D+  Y+ LI+GL KS R + A  L                           
Sbjct: 496 RKGVLP---DVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAE 552

Query: 284 -----------------------FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
                                  ++S+  R    D   Y+I+IHG C  G + KA     
Sbjct: 553 FKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHK 612

Query: 321 DMEENAVAPNVIIFVTLIHGF 341
            M  +  +PN    ++L+ G 
Sbjct: 613 QMLRSGFSPNSTSTISLVRGL 633



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 125/272 (45%), Gaps = 50/272 (18%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY+TII G CK G +D A  L  +M  + + PD +TY+SLI GLC     N+A  
Sbjct: 395 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 454

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG-- 130
           LF  M+  GVQP   T+  ++D  CK G +++A  L D M+++ V P+  TYS L++G  
Sbjct: 455 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 514

Query: 131 ------------------------------------------------FCLTGKINRAEE 142
                                                           FC+ G +  A++
Sbjct: 515 KSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK 574

Query: 143 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 202
           ++ SM     K D   Y+ILI+G+C+   V +ALS +++M+  G  P   +  +L  GLF
Sbjct: 575 VYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLF 634

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           E   V  A    +++      AD       ID
Sbjct: 635 EEGMVVEADNAIQDLLTCCPLADAEASKALID 666



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 4/209 (1%)

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           ++ LI  Y        A +      S G  P+V  YN + L L +   +  A +    M 
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDA-SLPSARRFLSSML 144

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
           R  VA +  TYN  +  LC  G + EAV +   +    C  +   YN L+   C++G L+
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 279 IALELFRSLPRRVLVA--DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
            A E   SL R    A  ++VT+N M++GLC  G+M+ A  +F +M    +AP+V+ + T
Sbjct: 205 GA-ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNT 263

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           L+ G+ ++    + + +  +M ++ ++PD
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPD 292



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 52/234 (22%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           ++GV  +P+  TY T+IDG CKEG V+KA +L  +M  + + PDVVTY+ LI+GL  +  
Sbjct: 461 QLGV--QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 518

Query: 67  WNEAKRL--------------------------------------------------FFE 76
             EA RL                                                  +  
Sbjct: 519 TKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQS 578

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+D+  +     +++++   C+ G + +A      M++    PN+ +  +L+ G    G 
Sbjct: 579 MLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGM 638

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +  A+     + +     D  +   LI+   K   V+  + +   M   G+ P+
Sbjct: 639 VVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 692


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  227 bits (578), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 125/362 (34%), Positives = 188/362 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +  TYN +I GL    FV+KA AL L+M+ E I P VVTYN+LI GL    +   A+ 
Sbjct: 297 KASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQV 356

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM  +G+ P ++T+N +++  CK G + +A  L   + +  + P   TY+ L+DG+C
Sbjct: 357 KFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYC 416

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  L   M    C  D  +Y IL+NG C  + +      + EM+SKG++P   
Sbjct: 417 RLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCF 476

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YNT       I  + +A +L EEM    +++DT TYN  IDGLCK G + +A  L+  +
Sbjct: 477 AYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKM 536

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 LD   Y CLI   C+ GRL  A  +F  +    L   VVTY I IH  C  G +
Sbjct: 537 VTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNL 596

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A+  F  M E  V PN + +  L+H   R+ +     +  H+M E+ ++P+    +++
Sbjct: 597 YLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLL 656

Query: 373 VD 374
           +D
Sbjct: 657 ID 658



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/352 (32%), Positives = 181/352 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTYNT+IDGL K G  + A+  F +M+ + + PD++TYNSLI+G C A +  +A  L
Sbjct: 333 PTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCL 392

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F ++   G+ P+V+T+N+++D  C+ G ++ A RL + M + D  P+  TY+ LM+G C+
Sbjct: 393 FGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCM 452

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +      F  M S G + D  +YN  I+       +  A  L  EM+ +GI    VT
Sbjct: 453 VRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVT 512

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  GL +   ++ A  L+ +M  D +  D  TY   I   C+ G ++EA  +F  + 
Sbjct: 513 YNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMV 572

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  +  Y   I   C+ G L +A   FR +    +  + VTYN+++H LC  G+ +
Sbjct: 573 ASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTE 632

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            A+  F +M E  + PN   +  LI G  +       I L  +M +K + PD
Sbjct: 633 SAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPD 684



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 162/328 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TYN++I+G CK G + +A  LF  +K   + P V+TYN LI G C   D   A+RL
Sbjct: 368 PDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRL 427

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM ++   P V T+ ++M+  C    +       D M+ + + P+ F Y+T +     
Sbjct: 428 KEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELT 487

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G I  A +L   M   G   D V+YN+LI+G CK   +++A  L+ +MV+ G++   VT
Sbjct: 488 IGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVT 547

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L     E  ++  A  +F+ M    ++    TY  FI   C+ G +  A   FR + 
Sbjct: 548 YTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKML 607

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E +   YN L+  LC+ GR E A + F  +  R LV +  TY ++I G C +G   
Sbjct: 608 EEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWV 667

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            A  L+ +M +  + P+      L  GF
Sbjct: 668 HAIRLYCEMHQKGIHPDHCTHNALFKGF 695



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 172/340 (50%), Gaps = 3/340 (0%)

Query: 39  FLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
           F +M    + P V   N ++  L  A  W++ + ++ +M+  GV+PS+ T+N ++D  CK
Sbjct: 182 FQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCK 241

Query: 99  NGKMDEASRLLDLMVQRDVR--PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
            G+MD+A  LL  M  R     PN  TY+ +++G    G++ +A +L   M  +  K   
Sbjct: 242 AGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMR-LSKKASA 300

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            +YN LI G      VE+A +L  EM ++GI PTVVTYNTL  GLF+    E A   F+E
Sbjct: 301 FTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDE 360

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M+   +  D  TYN+ I+G CK G + +A+ LF  L        +  YN LIDG C+ G 
Sbjct: 361 MRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGD 420

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           LE A  L   +     + DV TY I+++G C    +      F +M    + P+   + T
Sbjct: 421 LEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNT 480

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            I   + I   +   +L  +M  + +  D    ++++D L
Sbjct: 481 RISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGL 520



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 185/404 (45%), Gaps = 71/404 (17%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQ--GVQPSVVTFN 90
           D  +A++  M    + P + TYN+L+   C A   ++A  L  +M  +  G  P+ VT+N
Sbjct: 211 DDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYN 270

Query: 91  VIMDELCKNGKMDEASRLLDLM------------------VQRD---------------- 116
           V+++ L + G++++A++L+D+M                  + RD                
Sbjct: 271 VVINGLARKGELEKAAQLVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEG 330

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           + P   TY+TL+DG   TG    A+  F  M + G   D ++YN LINGYCK   +++AL
Sbjct: 331 IVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQAL 390

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            L+ ++   G+ PTV+TYN L  G   +  +E A +L EEM  +D   D  TY   ++G 
Sbjct: 391 CLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGS 450

Query: 237 C--KN---------------------------------GYIVEAVELFRTLGILKCELDI 261
           C  +N                                 G I  A +L   + +     D 
Sbjct: 451 CMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDT 510

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
             YN LIDGLCK+G L+ A  L+  +    L  D VTY  +IH  C  G++ +A ++F  
Sbjct: 511 VTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDG 570

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           M  + ++P+V+ +   IH + R            KM E+ V P+
Sbjct: 571 MVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPN 614



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/191 (38%), Positives = 100/191 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +TVTYN +IDGLCK G +  A  L+++M  + +  D VTY  LIH  C      EAK +F
Sbjct: 509 DTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIF 568

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M+  G+ PSVVT+ + +   C+ G +  A      M++  V PN  TY+ LM   C  
Sbjct: 569 DGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRM 628

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+   A + F  M   G   +  +Y +LI+G CK      A+ LY EM  KGI P   T+
Sbjct: 629 GRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTH 688

Query: 195 NTLFLGLFEIH 205
           N LF G  E H
Sbjct: 689 NALFKGFGEGH 699



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 3/194 (1%)

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           + LS ++EM   G+ P V   N +   L +  + +    ++ +M +  V     TYNT +
Sbjct: 177 QCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLL 236

Query: 234 DGLCKNGYIVEAVELFRTL--GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
           D  CK G + +AV L + +      C  +   YN +I+GL + G LE A +L   + R  
Sbjct: 237 DSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLV-DIMRLS 295

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
             A   TYN +I GL     ++KA  L L+ME   + P V+ + TLI G  +        
Sbjct: 296 KKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQ 355

Query: 352 ELLHKMKEKKVMPD 365
               +M+ K ++PD
Sbjct: 356 VKFDEMRAKGLLPD 369



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 66/127 (51%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           +G +     P+ VTY   I   C+ G +  A   F +M  E + P+ VTYN L+H LC  
Sbjct: 569 DGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRM 628

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
                A + F EM+++G+ P+  T+ +++D  CK G    A RL   M Q+ + P+  T+
Sbjct: 629 GRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTH 688

Query: 125 STLMDGF 131
           + L  GF
Sbjct: 689 NALFKGF 695


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  227 bits (578), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 128/376 (34%), Positives = 206/376 (54%), Gaps = 15/376 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VT+N++++GLCK G ++ A+ +F +M  E + PDVV+YN+L+ G C     +E+  
Sbjct: 220 KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLA 279

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM  +G+ P VVTF  ++   CK G +++A  L+  M +R +R N  T++ L+DGFC
Sbjct: 280 VFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFC 339

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A      M   G +   V YN LINGYCK   ++ A  L REM +K +KP VV
Sbjct: 340 KKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVV 399

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+T+  G  ++  ++ A +L ++M +  V  D  TY++ I GLC+   + +A ELF  +
Sbjct: 400 TYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 459

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             L  + D   Y  LIDG CK G +E AL L   + R+ ++ DVVTY+++I+GL    + 
Sbjct: 460 LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSART 519

Query: 313 DKAHDLFLDMEENAVAPNVIIF---------------VTLIHGFVRINKPSKVIELLHKM 357
            +AH L   +      P+ I +               V L+ GF       +  ++   M
Sbjct: 520 KEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSM 579

Query: 358 KEKKVMPDASIVSMVV 373
            ++    D S+ S+++
Sbjct: 580 LDRNWKLDGSVYSILI 595



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/361 (33%), Positives = 202/361 (55%), Gaps = 7/361 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDW 67
           G  C PN VTYNT++   C+ G +D A+ +   M+ E N  P++VT+NS+++GLC A   
Sbjct: 180 GAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRM 239

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A+++F EM+ +G+ P VV++N ++   CK G + E+  +   M QR + P+  T+++L
Sbjct: 240 EGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSL 299

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +   C  G + +A  L   M   G + ++V++  LI+G+CK   +++AL    EM   GI
Sbjct: 300 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 359

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P+VV YN L  G  ++ +++ A +L  EM+   V  D  TY+T I G CK G +  A +
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419

Query: 248 LFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           L + +   G+L    D   Y+ LI GLC+  RL  A ELF ++ +  +  D  TY  +I 
Sbjct: 420 LNQKMLKKGVLP---DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLID 476

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G C +G ++KA  L  +M    V P+V+ +  LI+G  +  +  +   LL K+  +  +P
Sbjct: 477 GHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVP 536

Query: 365 D 365
           D
Sbjct: 537 D 537



 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 205/364 (56%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN ++  LC  G +++A  +   M+G    P+ VTYN+L+   C A + + A+R+
Sbjct: 150 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 209

Query: 74  FFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              M ++G  +P++VTFN +++ LCK G+M+ A ++ D MV+  + P+  +Y+TL+ G+C
Sbjct: 210 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 269

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ +  +F  M   G   D V++  LI+  CK   +E+A++L  +M  +G++   V
Sbjct: 270 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 329

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+  L  G  +   ++ AL   EEM++  +      YN  I+G CK G +  A EL R +
Sbjct: 330 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 389

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + + D+  Y+ +I G CK G L+ A +L + + ++ ++ D +TY+ +I GLC + ++
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 449

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A +LF +M +  V P+   + TLI G  +     K + L  +M  K V+PD    S++
Sbjct: 450 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509

Query: 373 VDLL 376
           ++ L
Sbjct: 510 INGL 513



 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 192/365 (52%), Gaps = 8/365 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   YN ++  L  +  +  A+     M    + P+V TYN L+  LC      EA  +
Sbjct: 116 PSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR-DVRPNAFTYSTLMDGFC 132
             +M   G  P+ VT+N ++   C+ G++D A R++ LM +  + +PN  T++++++G C
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A ++F  M   G   D VSYN L++GYCK   + E+L+++ EM  +G+ P VV
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE---AVELF 249
           T+ +L     +   +E A+ L  +M+   +  +  T+   IDG CK G++ +   AVE  
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           R  GI   +  +  YN LI+G CK GR+++A EL R +  + +  DVVTY+ +I G C  
Sbjct: 355 RKCGI---QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G +D A  L   M +  V P+ I + +LI G     + +   EL   M +  V PD    
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 370 SMVVD 374
           + ++D
Sbjct: 472 TTLID 476



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 191/381 (50%), Gaps = 56/381 (14%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+YNT++ G CK G + ++ A+F +M    + PDVVT+ SLIH  C A +  +A  L
Sbjct: 256 PDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVAL 315

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M ++G++ + VTF  ++D  CK G +D+A   ++ M +  ++P+   Y+ L++G+C 
Sbjct: 316 VAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCK 375

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A EL   ME+   K D V+Y+ +I+GYCK   ++ A  L ++M+ KG+ P  +T
Sbjct: 376 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 435

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           Y++L  GL E  ++  A +LFE M +  V  D  TY T IDG CK G + +A+ L   + 
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 495

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALEL--------------------------- 283
             G+L    D+  Y+ LI+GL KS R + A  L                           
Sbjct: 496 RKGVLP---DVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAE 552

Query: 284 -----------------------FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
                                  ++S+  R    D   Y+I+IHG C  G + KA     
Sbjct: 553 FKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHK 612

Query: 321 DMEENAVAPNVIIFVTLIHGF 341
            M  +  +PN    ++L+ G 
Sbjct: 613 QMLRSGFSPNSTSTISLVRGL 633



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 125/272 (45%), Gaps = 50/272 (18%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY+TII G CK G +D A  L  +M  + + PD +TY+SLI GLC     N+A  
Sbjct: 395 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 454

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG-- 130
           LF  M+  GVQP   T+  ++D  CK G +++A  L D M+++ V P+  TYS L++G  
Sbjct: 455 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 514

Query: 131 ------------------------------------------------FCLTGKINRAEE 142
                                                           FC+ G +  A++
Sbjct: 515 KSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK 574

Query: 143 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 202
           ++ SM     K D   Y+ILI+G+C+   V +ALS +++M+  G  P   +  +L  GLF
Sbjct: 575 VYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLF 634

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           E   V  A    +++      AD       ID
Sbjct: 635 EEGMVVEADNAIQDLLTCCPLADAEASKALID 666



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 4/209 (1%)

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           ++ LI  Y        A +      S G  P+V  YN + L L +   +  A +    M 
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDA-SLPSARRFLSSML 144

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
           R  VA +  TYN  +  LC  G + EAV +   +    C  +   YN L+   C++G L+
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 279 IALELFRSLPRRVLVA--DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
            A E   SL R    A  ++VT+N M++GLC  G+M+ A  +F +M    +AP+V+ + T
Sbjct: 205 GA-ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNT 263

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           L+ G+ ++    + + +  +M ++ ++PD
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPD 292


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  227 bits (578), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 120/358 (33%), Positives = 198/358 (55%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTYNT+I+  C+EG V++A  L        + P ++TYN++++GLC    ++ AK +  E
Sbjct: 293 VTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIE 352

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+  G+ P+  T+N ++ E+C+   + EA  + D M +R V P+  ++S+L+      G 
Sbjct: 353 MLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGH 412

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           + +A   F  ME  G   D+V Y ILI+G+C+N  + +AL +  EM+++G    VVTYNT
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNT 472

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
              GL +      A  LF EM    +  D  T+ T I G CK+G + +A+ LF  +    
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN 532

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            + D   YN LIDG CK+G +  A EL+  + R+ ++ D ++Y  +++G C+ G + +A 
Sbjct: 533 LKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEAL 592

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +L   M E  + PN++   TLI G+ R     K  E L KM    ++PD+   + ++D
Sbjct: 593 NLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLID 650



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 118/348 (33%), Positives = 192/348 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  +TYN I+ GLCK G  D+AK + ++M    + P+  TYN+L+  +C  ++  EA+ 
Sbjct: 324 EPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQE 383

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM  +GV P +V+F+ ++  L +NG + +A      M +  + P+   Y+ L+DGFC
Sbjct: 384 IFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFC 443

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A ++   M + GC  D V+YN  +NG CK K   +A  L+ EMV +G+ P   
Sbjct: 444 RNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFY 503

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+ TL  G  +   ++ AL LFE M R ++  D  TYNT IDG CK G +  A EL+  +
Sbjct: 504 TFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDM 563

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D  +Y  +++G C SG L  AL L   +  + +  ++VT N +I G C  G M
Sbjct: 564 IRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDM 623

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            KA++    M  N + P+   + TLI G+++     K   L+++M+++
Sbjct: 624 PKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKR 671



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/351 (34%), Positives = 181/351 (51%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T N +++ LCK+   +        M+G+ +  D+VTYN+LI+  C      EA +L 
Sbjct: 256 NVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLL 315

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
                +G++P ++T+N I+  LCK GK D A  +L  M+Q  + PNA TY+TL+   C  
Sbjct: 316 NSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRR 375

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
             I  A+E+F  M   G   D VS++ LI    +N  + +AL  +REM   GI P  V Y
Sbjct: 376 DNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIY 435

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  G      +  ALK+ +EM       D  TYNTF++GLCK     +A  LF  +  
Sbjct: 436 TILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVE 495

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D   +  LI G CK G ++ AL LF ++ R  L  D VTYN +I G C  G+M +
Sbjct: 496 RGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGR 555

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           A +L+ DM    + P+ I + T+++GF       + + L  +M EK + P+
Sbjct: 556 AKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPN 606



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 180/346 (52%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N ++ GL + G+VD A  ++ ++    I  +V T N +++ LC    +        +M  
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
           +GV   +VT+N +++  C+ G ++EA +LL+    R + P   TY+ ++ G C  GK +R
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDR 345

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A+++   M  +G   +  +YN L+   C+   + EA  ++ EM  +G+ P +V++++L  
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIG 405

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
            L     +  AL  F EM+R  +  D   Y   IDG C+NG + +A+++   +    C +
Sbjct: 406 VLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM 465

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           D+  YN  ++GLCK      A  LF  +  R +V D  T+  +I G C DG MDKA +LF
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             M    + P+ + + TLI GF +  +  +  EL   M  K ++PD
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPD 571



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 192/355 (54%), Gaps = 6/355 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+++++I  L + G + +A   F +M+   I PD V Y  LI G C     ++A ++
Sbjct: 395 PDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKM 454

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+ +G    VVT+N  ++ LCK     +A  L + MV+R + P+ +T++TL+ G+C 
Sbjct: 455 RDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCK 514

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +++A  LF +M     K D V+YN LI+G+CK  E+  A  L+ +M+ K I P  ++
Sbjct: 515 DGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHIS 574

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           Y T+  G      +  AL L ++M    +  +  T NT I G C++G + +A E    + 
Sbjct: 575 YGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMI 634

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             GI+    D  +YN LIDG  K   LE A  L   + +R L  +++TYN++++G C +G
Sbjct: 635 SNGIIP---DSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEG 691

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +M +A  +   M E  + P+   + +LI+G V  +   +      +M ++ ++PD
Sbjct: 692 KMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 151/284 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  + VTYNT ++GLCK+     A  LF +M    + PD  T+ +LI G C   + ++A 
Sbjct: 463 CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKAL 522

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M+   ++P  VT+N ++D  CK G+M  A  L D M+++D+ P+  +Y T+++GF
Sbjct: 523 NLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGF 582

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +G +  A  L   M   G + + V+ N LI GYC++ ++ +A     +M+S GI P  
Sbjct: 583 CSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDS 642

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +YNTL  G  +   +E A  L  EM++  +  +  TYN  ++G C  G + EA ++ R 
Sbjct: 643 FSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRK 702

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           +  +    D   Y+ LI+G      ++ A      + +R LV D
Sbjct: 703 MIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 180/369 (48%), Gaps = 7/369 (1%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G +G++       Y+ ++    +   + +    F  ++ + ++  +   N L+ GL    
Sbjct: 184 GSVGLI-------YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTG 236

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             + A  ++ E++  G++ +V T N++++ LCK+ K +     L  M  + V  +  TY+
Sbjct: 237 WVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYN 296

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL++ +C  G +  A +L  S  S G +   ++YN ++ G CK  + + A  +  EM+  
Sbjct: 297 TLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL 356

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G+ P   TYNTL + +     +  A ++F+EM R  V  D  ++++ I  L +NG++ +A
Sbjct: 357 GLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQA 416

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           +  FR +       D   Y  LIDG C++G L  AL++   +  R    DVVTYN  ++G
Sbjct: 417 LMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNG 476

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC       A  LF +M E  + P+   F TLI G+ +     K + L   M    + PD
Sbjct: 477 LCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPD 536

Query: 366 ASIVSMVVD 374
               + ++D
Sbjct: 537 KVTYNTLID 545



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 108/218 (49%)

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y++L+  Y + K++ E    ++ +  KG+  ++   N L  GL     V+ A +++ E+ 
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
           R  +  +  T N  ++ LCK+      +     +       DI  YN LI+  C+ G +E
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +L  S   R +   ++TYN +++GLC  G+ D+A D+ ++M +  + PN   + TL+
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               R +   +  E+  +M  + V+PD    S ++ +L
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVL 407



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 77/144 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VT NT+I G C+ G + KA     +M    I PD  +YN+LI G     +  +A  
Sbjct: 604 RPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFI 663

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  +G+Q +++T+N+I++  C  GKM EA ++L  M++  + P+  TYS+L++G  
Sbjct: 664 LINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHV 723

Query: 133 LTGKINRAEELFGSMESMGCKHDD 156
               +  A      M   G   DD
Sbjct: 724 SQDNMKEAFRFHDEMLQRGLVPDD 747


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  227 bits (578), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 127/371 (34%), Positives = 195/371 (52%), Gaps = 10/371 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TY  +IDGL K G V++A+ +F+ M G    PD   Y +LI GLC +    EA  L
Sbjct: 110 PTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYAL 169

Query: 74  FFEMMDQ----GVQPSVVTFNVIMDELCKNGKMDEASRLLD-LMVQRDVRPNAFTYSTLM 128
           + E   +       P VVT+  ++D LCK G++ EA ++ D   V+R   P+A TY++++
Sbjct: 170 YKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSII 229

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C  G++    E F  M + G + D V+Y  LI+G+ K K + +A  +YR+M+  G  
Sbjct: 230 DGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTV 289

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
            + VTYN +  GL +  +V  A   F  M+     A   TY+  +DG C  G +  AVEL
Sbjct: 290 VSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVEL 349

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           FR +    CE ++ +YN +I GLC++G+L  A   F  L +R L  DV T+N  +HGLC 
Sbjct: 350 FRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQ 409

Query: 309 DGQMDKAHD---LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             ++D   D   LF  M     +PN+  +  L+ G  R       +E+  +M  + V PD
Sbjct: 410 --RLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPD 467

Query: 366 ASIVSMVVDLL 376
             + + ++  L
Sbjct: 468 VVVFNTLIRWL 478



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 121/360 (33%), Positives = 192/360 (53%), Gaps = 7/360 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V +  +I+GLC+E  +D+A ++  +       PD VTYN  I GLC A   ++A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  +M ++   P+ VT+  ++D L K G++DEA  +L+ MV++   P   TY+ ++DG 
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK----GI 187
              G++  A  +F  M   GC+ D   Y  LI G CK+ + EEA +LY+E  ++      
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLF--EEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            P VVTY +L  GL +  ++  A ++F  E ++R  +  D  TY + IDGLCK G + E 
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFI-PDAVTYTSIIDGLCKLGRVEEG 241

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            E F  +     E D   Y  LIDG  K+  +  A  ++R + +   V   VTYNI++ G
Sbjct: 242 CERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDG 301

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC  G++ +A+  FL MEE      V+ +  L+ GF      S  +EL  +M ++   P+
Sbjct: 302 LCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPN 361



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 114/318 (35%), Positives = 176/318 (55%), Gaps = 2/318 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY +IIDGLCK G V++    F +M+     PD VTY +LI G   A    +A R+
Sbjct: 220 PDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRV 279

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +M+  G   S VT+N+I+D LCK G++ EA      M +R       TYS LMDGFC 
Sbjct: 280 YRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCS 339

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A ELF  M   GC+ + VSYNI+I G C+  ++ +A   + +++ + + P V T
Sbjct: 340 EGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYT 399

Query: 194 YNTLFLGLFE-IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +N    GL + +  V   ++LFE M     + +  +Y+  +DG+C+ G +  A+E+FR +
Sbjct: 400 FNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREM 459

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D+  +N LI  LC +GR++ ALE+FR L RR    D  +Y  ++ GL    +M
Sbjct: 460 VSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDGLSRCERM 518

Query: 313 DKAHDLFLDMEENAVAPN 330
           ++A  L   M+    AP 
Sbjct: 519 EEARLLSFHMKLQGCAPR 536



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 138/269 (51%), Gaps = 2/269 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTY  +IDG  K   + KA  ++ QM         VTYN ++ GLC A    EA  
Sbjct: 254 EPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYA 313

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F  M ++G   +VVT++ +MD  C  G +  A  L   M+ R   PN  +Y+ ++ G C
Sbjct: 314 TFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLC 373

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE-VEEALSLYREMVSKGIKPTV 191
             GK+ +A   F  +       D  ++N  ++G C+  + V + + L+  MVS+G  P +
Sbjct: 374 RAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNL 433

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +Y+ L  G+     +E AL++F EM    VA D   +NT I  LC  G + EA+E+FR 
Sbjct: 434 HSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRE 493

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIA 280
           L   +   D  +Y  L+DGL +  R+E A
Sbjct: 494 LE-RRSAPDAWSYWSLLDGLSRCERMEEA 521



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 108/210 (51%), Gaps = 6/210 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C    VTY+ ++DG C EG V  A  LF +M      P++V+YN +I GLC A    +A 
Sbjct: 323 CVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAY 382

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS---RLLDLMVQRDVRPNAFTYSTLM 128
             F +++ + + P V TFN  +  LC+  ++D  S    L + MV +   PN  +YS LM
Sbjct: 383 FYFEKLLQRRLCPDVYTFNAFLHGLCQ--RLDTVSDGVELFESMVSQGTSPNLHSYSILM 440

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C  G +  A E+F  M S G   D V +N LI   C    V+EAL ++RE+  +   
Sbjct: 441 DGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-A 499

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           P   +Y +L  GL    ++E A  L   M+
Sbjct: 500 PDAWSYWSLLDGLSRCERMEEARLLSFHMK 529



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 121/265 (45%), Gaps = 40/265 (15%)

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
           M C  D V++ ++ING C+ K ++EA S+    V  G +P  VTYN    GL +  +V+ 
Sbjct: 1   MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL----------------- 252
           A +L ++M        T TY   +DGL K G + EA+ +   +                 
Sbjct: 61  AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVID 120

Query: 253 GILK------------------CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR---- 290
           G+ K                  C  D   Y  LI GLCKSG+ E A  L++    R    
Sbjct: 121 GLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHA 180

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME-ENAVAPNVIIFVTLIHGFVRINKPSK 349
             V DVVTY  +I GLC  G++ +A  +F D   E    P+ + + ++I G  ++ +  +
Sbjct: 181 TAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEE 240

Query: 350 VIELLHKMKEKKVMPDASIVSMVVD 374
             E  H+M+ +   PDA   + ++D
Sbjct: 241 GCERFHEMRNRGYEPDAVTYAALID 265


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 119/333 (35%), Positives = 195/333 (58%), Gaps = 5/333 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN +TY+ +ID +CK G V+KA  +FL MK     P++ TY S+I GL  +   ++A 
Sbjct: 155 CSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAF 214

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM  +G+  + V +N ++  L ++G+ D A++L   M+ + ++P+  T+++L+ G 
Sbjct: 215 FLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGL 274

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            + G+ + A  +F     +GC  D   YN+LI+  CK+K ++EA  ++ E+   G+ P V
Sbjct: 275 GVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDV 334

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+N L  GL +  ++  A  L  +M+R     D + YNT IDGL K+G + EA +L   
Sbjct: 335 YTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLE 394

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  L  E D+  YN LID  CK GR+E AL LF  +  +   A+ VTYN +++GLC  G+
Sbjct: 395 MQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGR 453

Query: 312 MDKAHDLFLDMEENAV----APNVIIFVTLIHG 340
           +D+A+ LF  M++  V     P+ + + TL++G
Sbjct: 454 VDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNG 486



 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 118/352 (33%), Positives = 190/352 (53%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C      YN++ID   K G+  KA A++  M    + PD  T+N L++    A   +
Sbjct: 82  GHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVD 141

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
              +LF EM +Q   P+V+T+++++D +CK G +++A ++   M  R  RPN FTY++++
Sbjct: 142 SVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMI 201

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG   +G +++A  LF  M S G     V YN LI+G  ++   + A  L+REM+SKG++
Sbjct: 202 DGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQ 261

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  VT+ +L  GL    +   A ++F+E +    A D + YN  ID LCK+  + EA E+
Sbjct: 262 PDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEI 321

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  L       D+  +N L+DGLCKSGR+  A  L   + R     DV  YN +I GL  
Sbjct: 322 FGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRK 381

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            G++++A  L L+M+     P+V+ + TLI    +  +    + L  ++  K
Sbjct: 382 SGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAK 433



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 181/350 (51%)

Query: 25  GLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQP 84
           G    G ++K+     +M+G         YNSLI     A    +A  ++  M   G++P
Sbjct: 63  GYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRP 122

Query: 85  SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELF 144
              TFNV+M+   K  ++D   +L + M  ++  PN  TYS L+D  C  G + +A ++F
Sbjct: 123 DTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVF 182

Query: 145 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 204
             M+S GC+ +  +Y  +I+G  K+  V++A  L+ EM S+G+  T V YN+L  GL   
Sbjct: 183 LDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRS 242

Query: 205 HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
            + + A KLF EM    +  D  T+ + + GL   G   EA  +F+    + C LD+  Y
Sbjct: 243 GRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLY 302

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
           N LID LCKS RL+ A E+F  L    LV DV T+N ++ GLC  G++  A  L  DM+ 
Sbjct: 303 NVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKR 362

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
               P+V ++ TLI G  +  +  +  +LL +M+     PD    + ++D
Sbjct: 363 AGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLID 412



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 130/250 (52%)

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L  G+   G + ++ E    ME   C     +YN LI+ + K    ++AL++YR M   G
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           ++P   T+N L     +  +V+   KLFEEMQ  + + +  TY+  ID +CK G + +A+
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           ++F  +    C  +I  Y  +IDGL KSG ++ A  LF  +    LVA  V YN +IHGL
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              G+ D A  LF +M    + P+ + F +L++G     + S+   +  + ++     D 
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDV 299

Query: 367 SIVSMVVDLL 376
           ++ ++++D L
Sbjct: 300 NLYNVLIDTL 309



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 108/195 (55%), Gaps = 5/195 (2%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           V C  +   YN +ID LCK   +D+A  +F +++ + + PDV T+N+L+ GLC +   ++
Sbjct: 293 VGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHD 352

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  L  +M   G  P V  +N ++D L K+G+++EA +LL  M      P+  TY+TL+D
Sbjct: 353 AFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLID 412

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY----REMVSK 185
             C  G+I  A  LF  + + G   + V+YN ++NG C    V+EA  L+    +E V  
Sbjct: 413 ESCKGGRIEDALRLFEEISAKGFA-NTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDG 471

Query: 186 GIKPTVVTYNTLFLG 200
            I P  VTY TL  G
Sbjct: 472 VIDPDFVTYTTLLNG 486


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 193/361 (53%), Gaps = 5/361 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N +TY+ ++DGLCK   +D+A AL   M      P VVTYNS+I G C A   +EA    
Sbjct: 108 NAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFM 167

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M+ +G  P ++T+  ++   CK+  +     LL  + +R   P+  TYST++DG C  
Sbjct: 168 EQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKA 227

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G++  A ++F   E M C    ++YN LI GYC+  +++EA+ L  +MV     P VVTY
Sbjct: 228 GRLRDAVDIF---EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTY 284

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            TL     ++ +++ A +LF++M  + ++ D  T+ + +DGLC  G + +A+EL   +  
Sbjct: 285 TTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITR 344

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C   I  YNC++DG CK+ ++  A EL      R  V + VTYNI++ G C  G+ D+
Sbjct: 345 RGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQ 404

Query: 315 AHDLF--LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           A      L+ E      +V ++  ++    R  +    ++   +M ++  +P A+  + V
Sbjct: 405 ALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATV 464

Query: 373 V 373
           V
Sbjct: 465 V 465



 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 118/361 (32%), Positives = 190/361 (52%), Gaps = 4/361 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P T+ +N +I GLC+ G +  A  ++ QM   +  PD +TY  L+HGL  A    +A ++
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+     P   T  V++  LC   ++D+A  L++ M+ R +  NA TYS L+DG C 
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +++ A  L  +M   GC    V+YN +I G+C+ + V+EA     +MV++G  P ++T
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G  +   V   L+L  E+ R     D  TY+T IDGLCK G + +AV++F    
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE-- 239

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            + C      YN LI G C++G ++ A+ L   +       DVVTY  ++   C  G++D
Sbjct: 240 -MSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLD 298

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A++LF  M  N ++P+V+ F +L+ G     +    +ELL ++  +   P     + VV
Sbjct: 299 DAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVV 358

Query: 374 D 374
           D
Sbjct: 359 D 359



 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 189/367 (51%), Gaps = 11/367 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  VTYN+II G C+   VD+A     QM  E  +PD++TY +LI G C + D     
Sbjct: 140 CAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGL 199

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  E+  +G  P +VT++ ++D LCK G++ +A   +D+  +    P A TY++L+ G+
Sbjct: 200 ELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA---VDIFEEMSCAPTAITYNSLIGGY 256

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G ++ A  L G M    C  D V+Y  L++ +CK   +++A  L+++MV+  + P V
Sbjct: 257 CRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDV 316

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL--- 248
           VT+ +L  GL    ++E AL+L EE+ R        TYN  +DG CK   + +A EL   
Sbjct: 317 VTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVAD 376

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR--VLVADVVTYNIMIHGL 306
           FR+ G +    +   YN L+ G C++GR + AL+    L          V  Y I++  L
Sbjct: 377 FRSRGFVP---NTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDAL 433

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C DG+ D A   + +M +    P    F T++    + ++P +  ELL +M +    P  
Sbjct: 434 CRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGP 493

Query: 367 SIVSMVV 373
                VV
Sbjct: 494 GTCDAVV 500



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 146/285 (51%), Gaps = 16/285 (5%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  +TYN++I G C+ G +D+A  L  +M  +   PDVVTY +L+   C     ++A 
Sbjct: 242 CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAY 301

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF +M+   + P VVTF  ++D LC  G+M++A  LL+ + +R   P  +TY+ ++DG+
Sbjct: 302 ELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGY 361

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG--IKP 189
           C   ++ +AEEL     S G   + V+YNIL+ G C+    ++AL    ++ S+G     
Sbjct: 362 CKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPT 421

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           +V  Y  +   L    + + A++ +EEM +       +T+ T +  LCK     +A EL 
Sbjct: 422 SVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELL 481

Query: 250 -------RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
                   T G   C+  + AY       C++G ++ A EL   L
Sbjct: 482 EEMIKYGHTPGPGTCDAVVSAY-------CRAGMIQKADELASEL 519



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 46/100 (46%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C  +   Y  I+D LC++G  D A   + +M      P   T+ +++  LC A+   
Sbjct: 416 GGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQ 475

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           +A  L  EM+  G  P   T + ++   C+ G + +A  L
Sbjct: 476 QAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 515



 Score = 45.8 bits (107), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           +N++I GLC  G++  A  ++  M  +A  P+ + +  L+HG  +  +    +++L +M 
Sbjct: 8   HNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMV 66

Query: 359 EKKVMPDASIVSMVVDLL 376
             + +PD + +++VV  L
Sbjct: 67  SARHVPDNTTLTVVVQSL 84


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 122/352 (34%), Positives = 191/352 (54%), Gaps = 1/352 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K   + Y+TII+ LCK   V++A+ L  +M      PD +TY  ++  LC     ++A  
Sbjct: 77  KRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERLCKTKRIDDALA 135

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              EM  +G++P    +N ++  LC+  K++EA  L + MV++ + PN  TY+TL++G C
Sbjct: 136 TVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLC 195

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +I  A ELF  M   G    +VSYN LI+G+CK K++  A  ++ +MV     P VV
Sbjct: 196 KAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVV 255

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  GL +  +V+ A ++ + M +  V  + +TY+  IDG CK   + EA +L   +
Sbjct: 256 TYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQM 315

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   +  YN L++ LC++ +LE A +LFR + +R     VVTYN ++  LC+  Q+
Sbjct: 316 VTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQL 375

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           D AH L+ +M      P+ I + TL  G  R  K  +  EL+ KMK  K  P
Sbjct: 376 DGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427



 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 186/351 (52%), Gaps = 1/351 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   T+NT+ DG  K G +++ K ++  M           Y  LI  LC   +++EA +L
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +  +   + ++ I++ LCK  +++EA  L++ M  R   P+A TY  +++  C 
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGPIVERLCK 126

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           T +I+ A      M + G K D   YN +++G C+ ++VEEA  L+ +MV + I P VVT
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL +  ++E A +LF+EM          +YNT IDG CK   +V A ++F  + 
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  ++  Y  LIDGL KSG+++ A E+   + ++ +  +V TY+ +I G C   ++D
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVD 306

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           +AH L   M    +AP V+ +  L++   R +K     +L   M +++  P
Sbjct: 307 EAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHP 357



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 173/333 (51%), Gaps = 11/333 (3%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P   T+N++  G   A    + K ++  M++ G       + +++  LCK G  DEA +L
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG--CKHDDVSYNILINGY 166
           L  M  +  +  A  YST+++  C   K+NR EE    +E M      D ++Y  ++   
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLC---KLNRVEEARELIEKMARYAPPDALTYGPIVERL 124

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           CK K +++AL+   EM ++GIKP    YN +  GL +  +VE A  LFE+M +  +  + 
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNV 184

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALEL 283
            TYNT I+GLCK   I  A ELF+ +   G +  E+   +YN LIDG CK   L  A ++
Sbjct: 185 VTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEV---SYNTLIDGFCKKKDLVAAKDV 241

Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           F  + R   V +VVTY  +I GL   G++  A ++   M +  V PNV  +  LI GF +
Sbjct: 242 FDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCK 301

Query: 344 INKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + +  +  +LL +M  + + P     +++++ L
Sbjct: 302 VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSL 334



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 144/298 (48%), Gaps = 1/298 (0%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M  + V P   TFN + D   K G++++   +   MV+      A  Y  L+   C  G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
            + A +L  +M     K   ++Y+ +IN  CK   VEEA  L  +M ++   P  +TY  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGP 119

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +   L +  +++ AL   EEM    +  D   YN  + GLC+   + EA  LF  +   +
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              ++  YN LI+GLCK+ R+E A ELF+ +  +  V   V+YN +I G C    +  A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           D+F  M  +   PNV+ + TLI G  +  K     E+L  M +K V P+ +  S ++D
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLID 297



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 98/171 (57%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY T+IDGL K G V  A  +   M  + + P+V TY+ LI G C     +EA 
Sbjct: 250 CVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAH 309

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  +M+ QG+ P+VVT+N++++ LC+  K+++A +L   M QR   P   TY+TL+   
Sbjct: 310 KLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRAL 369

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           C   +++ A  L+  M + GC  D ++Y+ L  G  +  +V EA  L  +M
Sbjct: 370 CHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 211/402 (52%), Gaps = 36/402 (8%)

Query: 9   GVVCK-PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
            V C   N  TYN+++  LCKEG + +A  L+ +M  + + P  V+YNS+I G C   + 
Sbjct: 445 AVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNL 504

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           + A  +F +M+D G++P+V+T++++MD   KNG  + A  + D MV  ++ P+ FTY+  
Sbjct: 505 DMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIK 564

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++G C  G+ + A+++       G     ++YN +++G+ K   V  AL+ YREM   G+
Sbjct: 565 INGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGV 624

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P V+TY TL  G  + +  + ALK+  EM+   +  D + Y   IDG CK   I  A  
Sbjct: 625 SPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASW 684

Query: 248 LF----------------------RTLGILKCEL-------------DIQAYNCLIDGLC 272
           LF                      R L  ++  L             D+Q Y  LIDGL 
Sbjct: 685 LFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLL 744

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           K GRL +AL+L+  +  + ++ D++ Y ++I+GLC  GQ++ A  +  +ME +++ PNV 
Sbjct: 745 KEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVP 804

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           I+  LI G  +     +   L ++M +K + P+ +   ++++
Sbjct: 805 IYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILIN 846



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 117/351 (33%), Positives = 186/351 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN +TY+ ++DG  K G  + A  +F +M  ENI P   TYN  I+GLC     +EA+ 
Sbjct: 520 KPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQD 579

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  + +++G  P  +T+N IMD   K G +  A      M +  V PN  TY+TL++GFC
Sbjct: 580 MLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFC 639

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                + A ++   M + G + D  +Y  LI+G+CK +++E A  L+ E++  G+ P  V
Sbjct: 640 KNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSV 699

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN+L  G   ++ +E AL L + M  + ++ D  TY T IDGL K G +V A++L+  +
Sbjct: 700 IYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEM 759

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  DI  Y  LI+GLC  G+LE A ++   + R  +  +V  YN +I G    G +
Sbjct: 760 SAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNL 819

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            +A  L  +M +  + PN   +  LI+G ++    +    L  K K+ K M
Sbjct: 820 QEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNSALKSLLSLKFKDGKGM 870



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 171/335 (51%), Gaps = 7/335 (2%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
           ++AK  FL+ K   +  D   Y+ +I   C   D   A  L  +M D+G  PS  TF  +
Sbjct: 261 EEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSV 320

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           +    K G M EA RL D MV   V+ N    +TL+ G+C   K+  A E F  M   G 
Sbjct: 321 IGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGP 380

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
             + V+Y +LI   CKN  + +A  LY +M +K I PTV   N+L  G  ++   E A K
Sbjct: 381 SPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASK 440

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLID 269
           LF+E    D+ A+  TYN+ +  LCK G + EA  L++ +   G+   ++   +YN +I 
Sbjct: 441 LFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKV---SYNSMIL 496

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           G C+ G L++A  +F  +    L  +V+TY+I++ G   +G  + A  +F  M +  + P
Sbjct: 497 GHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVP 556

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           +   +   I+G  ++ + S+  ++L K  EK  +P
Sbjct: 557 SDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVP 591



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 186/399 (46%), Gaps = 40/399 (10%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +   Y+ +I   CK   V+ A  L   M+ +   P   T+ S+I       +  EA R
Sbjct: 276 KLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALR 335

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+  GVQ +VV    ++   CK  K+  A    D M +    PN  TY+ L++  C
Sbjct: 336 LKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCC 395

Query: 133 LTGKINRAEELFGSM---------------------------------ESMGCKHDDV-S 158
             G + +A +L+  M                                 E++ C   ++ +
Sbjct: 396 KNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFT 455

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN L++  CK  ++ EA +L+++M+ KG+ PT V+YN++ LG      ++ A  +F +M 
Sbjct: 456 YNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDML 515

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCKSG 275
              +  +  TY+  +DG  KNG    A  +F  +    I+  +     YN  I+GLCK G
Sbjct: 516 DCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDF---TYNIKINGLCKVG 572

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           R   A ++ +    +  V   +TYN ++ G   +G +  A   + +M E+ V+PNVI + 
Sbjct: 573 RTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYT 632

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           TLI+GF + N     +++ ++M+ K +  D +    ++D
Sbjct: 633 TLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALID 671



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 166/388 (42%), Gaps = 69/388 (17%)

Query: 46  NINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA 105
           + + D+  YN L++    AN  N+A   F  +++  + P +   N ++  L KN  + EA
Sbjct: 169 DFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEA 228

Query: 106 SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILING 165
             + + MV + V  + FT   +M           A++ F   +S G K D  +Y+I+I  
Sbjct: 229 REVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQA 288

Query: 166 YCKNKEVE-----------------------------------EALSLYREMVSKGIKPT 190
           +CKN +VE                                   EAL L  EMVS G++  
Sbjct: 289 FCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMN 348

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VV   TL  G  +  ++  AL+ F++M  +  + +  TY   I+  CKNG + +A +L+ 
Sbjct: 349 VVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYT 408

Query: 251 TL-----------------GILKCE-----------------LDIQAYNCLIDGLCKSGR 276
            +                 G LK E                  +I  YN L+  LCK G+
Sbjct: 409 QMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGK 468

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +  A  L++ +  + L    V+YN MI G C  G +D A  +F DM +  + PNVI +  
Sbjct: 469 MSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSI 528

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMP 364
           L+ G+ +         +  +M ++ ++P
Sbjct: 529 LMDGYFKNGDTEYAFYVFDRMVDENIVP 556



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/284 (22%), Positives = 102/284 (35%), Gaps = 70/284 (24%)

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
           +   GS +      D   YN L+N Y K  ++ +A+  +  +V   I P +   N L   
Sbjct: 159 DHFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTA 218

Query: 201 L-------------------------FEIH----------QVEHALKLFEEMQRDDVAAD 225
           L                         F +H            E A K F E +   V  D
Sbjct: 219 LVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLD 278

Query: 226 TSTYNTFIDGLCKN-----------------------------------GYIVEAVELFR 250
            + Y+  I   CKN                                   G +VEA+ L  
Sbjct: 279 AAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKD 338

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +     ++++     L+ G CK  +L  ALE F  +       + VTY ++I   C +G
Sbjct: 339 EMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNG 398

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
            M KA+DL+  M+   + P V I  +LI GF+++    +  +L 
Sbjct: 399 NMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLF 442


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/352 (34%), Positives = 190/352 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+N +ID   + G VD A AL   M    + P +VTYNS++ GLC    +++AK +
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEV 249

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M    V P V +FN+++   C+ G++ EA +    M  R V P+  ++S L+  F  
Sbjct: 250 FRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSR 309

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A      M+ +G   D V Y ++I G+C+   + EAL +  EMV  G  P VVT
Sbjct: 310 RGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVT 369

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL + H++  A KL  EM+   V  D  T+ T I G C+ G    A++LF TL 
Sbjct: 370 YNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLL 429

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +   D+  YN LIDG+C+ G L  A EL+  +  R ++ + +TY+I+I   C  GQ++
Sbjct: 430 RQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVE 489

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            A     +M +    PN+  + ++I G+ R     K  + L KM++  V PD
Sbjct: 490 DAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPD 541



 Score =  224 bits (572), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 118/362 (32%), Positives = 194/362 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VTYN+++ GLCK    DKAK +F  M   ++ PDV ++N LI G C   +  EA +
Sbjct: 224 KPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVK 283

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            + EM  + V P VV+F+ ++    + G+MD A   L  M    + P+   Y+ ++ GFC
Sbjct: 284 FYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFC 343

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A  +   M   GC  D V+YN L+NG CK   + +A  L  EM  +G+ P + 
Sbjct: 344 RAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLC 403

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+ TL  G       E+AL+LF+ + R  +  D  TYN+ IDG+C+ G + +A EL+  +
Sbjct: 404 TFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDM 463

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   +   Y+ LID  C+ G++E A      + ++  + ++ TYN +I G C  G +
Sbjct: 464 HAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNV 523

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            K       M ++ V P++I F TLIHG+++         + + M+++ V PDA   +M+
Sbjct: 524 KKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMI 583

Query: 373 VD 374
           ++
Sbjct: 584 IN 585



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 186/352 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+++ +I    + G +D A A   +MKG  + PD V Y  +I G C A   +EA R+
Sbjct: 295 PDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV 354

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+  G  P VVT+N +++ LCK  ++ +A +LL+ M +R V P+  T++TL+ G+C 
Sbjct: 355 RDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCR 414

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G    A +LF ++     + D V+YN LI+G C+  ++ +A  L+ +M ++ I P  +T
Sbjct: 415 QGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHIT 474

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L     E  QVE A    +EM +     +  TYN+ I G C++G + +  +  + + 
Sbjct: 475 YSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMR 534

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+  +N LI G  K   +  A  +F  + + ++  D VTYN++I+G    G M 
Sbjct: 535 QDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQ 594

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            A  +F  M ++ + P+   +++LI+G V      +  +L  +M  +   PD
Sbjct: 595 DAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 182/359 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T N ++   CK    D A  +  +M+   + PDVVT+N LI     A D + A  L 
Sbjct: 156 NAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M ++G++P +VT+N ++  LCK+ + D+A  +   M Q  V P+  +++ L+ GFC  
Sbjct: 216 DSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRV 275

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G++  A + +  M+      D VS++ LI  + +  E++ A +  REM   G+ P  V Y
Sbjct: 276 GEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIY 335

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             +  G      +  AL++ +EM       D  TYNT ++GLCK   +++A +L   +  
Sbjct: 336 TMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEE 395

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D+  +  LI G C+ G  E AL+LF +L R+ L  DVVTYN +I G+C  G + K
Sbjct: 396 RGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAK 455

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A++L+ DM    + PN I +  LI       +       L +M +K  +P+    + ++
Sbjct: 456 ANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSII 514



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 187/356 (52%), Gaps = 2/356 (0%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N ++  L + G+   A+  +  +   +   +  T N ++H  C   +++ A  +  EM  
Sbjct: 126 NALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEK 185

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
           + V P VVT NV++D   + G +D A  L+D M  R ++P   TY++++ G C   + ++
Sbjct: 186 RCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDK 245

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A+E+F +M+      D  S+NILI G+C+  EV+EA+  Y+EM  + + P VV+++ L +
Sbjct: 246 AKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCL-I 304

Query: 200 GLFEIH-QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
           GLF    +++HA     EM+   +  D   Y   I G C+ G + EA+ +   +    C 
Sbjct: 305 GLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCL 364

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            D+  YN L++GLCK  RL  A +L   +  R +  D+ T+  +IHG C  G  + A  L
Sbjct: 365 PDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQL 424

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           F  +    + P+V+ + +LI G  R    +K  EL   M  ++++P+    S+++D
Sbjct: 425 FDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILID 480



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 156/288 (54%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G  C P+ VTYNT+++GLCK+  +  A+ L  +M+   + PD+ T+ +LIHG C   ++
Sbjct: 359 VGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNF 418

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A +LF  ++ Q ++P VVT+N ++D +C+ G + +A+ L D M  R++ PN  TYS L
Sbjct: 419 ENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSIL 478

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D  C  G++  A      M   G   +  +YN +I GYC++  V++     ++M    +
Sbjct: 479 IDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNV 538

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P ++T+NTL  G  +   +  A  +F  M+++ V  D  TYN  I+G  + G + +A  
Sbjct: 539 FPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGR 598

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           +F+ +G    E D   Y  LI+G   +G  + A +L   +  R    D
Sbjct: 599 VFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 166/361 (45%), Gaps = 35/361 (9%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P    ++ LI     +    EA   F  ++D  V       N ++  L + G    A   
Sbjct: 85  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEA 144

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
             L++  D   NA+T + ++  +C T + + A+ +   ME      D V++N+LI+   +
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFR 204

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             +V+ A++L   M ++G+KP +VTYN++  GL +  + + A ++F  M +  VA D  +
Sbjct: 205 AGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRS 264

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL--------------------- 267
           +N  I G C+ G + EAV+ ++ +       D+ +++CL                     
Sbjct: 265 FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMK 324

Query: 268 --------------IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                         I G C++G +  AL +   +     + DVVTYN +++GLC   ++ 
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLL 384

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L  +MEE  V P++  F TLIHG+ R       ++L   +  +++ PD    + ++
Sbjct: 385 DAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLI 444

Query: 374 D 374
           D
Sbjct: 445 D 445



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 79/143 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN+II G C+ G V K +    +M+ +N+ PD++T+N+LIHG     + + A  +
Sbjct: 505 PNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNV 564

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M  + V+P  VT+N+I++   + G M +A R+   M    + P+ +TY +L++G   
Sbjct: 565 FNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVT 624

Query: 134 TGKINRAEELFGSMESMGCKHDD 156
            G   +A +L   M   G   DD
Sbjct: 625 AGNSKQAFQLHDEMIHRGFAPDD 647



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 130/321 (40%), Gaps = 21/321 (6%)

Query: 56  SLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           S +  +  A  W+ A  L  ++   G +PS              G+  E   LL  M +R
Sbjct: 8   SCLPTVAAATKWS-AGNLAIDIGTIGARPSTAALAAAATAAAAAGRASECQSLLLRMSRR 66

Query: 116 DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
                              G   R  E+  S+ +         +++LI  Y ++++  EA
Sbjct: 67  ------------------RGASRR--EIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREA 106

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
              +R ++   +       N L   L        A + +  +   D   +  T N  +  
Sbjct: 107 FEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHS 166

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
            CK      A  +   +       D+  +N LID   ++G ++ A+ L  S+  R L   
Sbjct: 167 YCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPG 226

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           +VTYN ++ GLC   + DKA ++F  M++ +VAP+V  F  LI GF R+ +  + ++   
Sbjct: 227 IVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYK 286

Query: 356 KMKEKKVMPDASIVSMVVDLL 376
           +M+ + V PD    S ++ L 
Sbjct: 287 EMQHRYVTPDVVSFSCLIGLF 307


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 210/407 (51%), Gaps = 38/407 (9%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E  +  +PN ++Y T++  LC +    +A  L   M+   + PDVVTY +LI GLC A D
Sbjct: 85  EPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAAD 144

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            + A  L  EM + G++P+VV ++ ++   CK G+ +   ++ + M  R + P+   Y+ 
Sbjct: 145 VDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTA 204

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+D  C  GK+ +A  +   M   G + + V+YN+LIN  CK   V EAL L + M  KG
Sbjct: 205 LIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKG 264

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD--VAADTSTYNTFIDGLCKNGYIVE 244
           ++P VVTYNTL  GL  + +++ A+ L EEM + +  V  D  T+N+ I GLCK G++ +
Sbjct: 265 VQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQ 324

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A+++   +    C  ++ A+N LI GL +  +++ A+EL   +    L  D  TY+I+I+
Sbjct: 325 ALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILIN 384

Query: 305 G-----------------------------------LCNDGQMDKAHDLFLDMEENAVAP 329
           G                                   +C+ G M +A DLF +M+ N    
Sbjct: 385 GFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKL- 443

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +   + T+IHG  +  +     E L  M ++ ++PDA   S+ +++ 
Sbjct: 444 DAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMF 490



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 207/436 (47%), Gaps = 73/436 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTY T+I GLC    VD A  L  +M    I P+VV Y+ L+HG C    W    +
Sbjct: 126 RPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGK 185

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM  +G++P VV +  ++D LC++GK+ +A+R++D+M +R + PN  TY+ L++  C
Sbjct: 186 VFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMC 245

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS--KGIKPT 190
             G +  A +L  +M   G + D V+YN LI G     E++EA++L  EM+     ++P 
Sbjct: 246 KEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPD 305

Query: 191 VVTYNT-----------------------------------LFLGLFEIHQVEHALKLFE 215
           ++T+N+                                   L  GL  +H+V+ A++L +
Sbjct: 306 LMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMD 365

Query: 216 EMQRDDVAADTSTYNTFIDGLCK-----------------------------------NG 240
           EM    +  D+ TY+  I+G CK                                    G
Sbjct: 366 EMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQG 425

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            + +A +LF  +    C+LD  AY+ +I G  KSG  +IA E  + +    L+ D VTY+
Sbjct: 426 MMGQARDLFNEMD-RNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYS 484

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           I I+     G +  A  +   M  +   P+V +F +LI G+       K++EL  +M  K
Sbjct: 485 IPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAK 544

Query: 361 KVMPDASIVSMVVDLL 376
            V  D  I+S +V  L
Sbjct: 545 DVALDPKIISTIVTSL 560



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 118/241 (48%), Gaps = 4/241 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N V +N +I GL +   V KA  L  +M    + PD  TY+ LI+G C       A+
Sbjct: 337 CRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAE 396

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
               EM  QG++P  V +  ++  +C  G M +A  L + M  R+ + +A  YST++ G 
Sbjct: 397 SYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGA 455

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
             +G+   AEE    M   G   D V+Y+I IN + K+ ++  A  + ++M + G  P V
Sbjct: 456 FKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDV 515

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             +++L  G       E  L+L  EM   DVA D    +T +  L   G  +E  +L ++
Sbjct: 516 AVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSL---GASIEGQKLLQS 572

Query: 252 L 252
           L
Sbjct: 573 L 573



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 3/155 (1%)

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLG---ILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           D  +YNT +  LC+ G +  A+ L R +     L    +  +Y  L+  LC   R   A+
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            L RS+    +  DVVTY  +I GLC+   +D A +L  +M E+ + PNV+++  L+HG+
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +  +   V ++  +M  + + PD  + + ++D L
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSL 209



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 3/178 (1%)

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS---TYNTFIDGLCKNGYIVEAVE 247
            V+YNT+   L     ++ AL L   M  +   A      +Y T +  LC +    +AV 
Sbjct: 56  AVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVG 115

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L R++       D+  Y  LI GLC +  ++ A+EL   +    +  +VV Y+ ++HG C
Sbjct: 116 LLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYC 175

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             G+ +    +F +M    + P+V+++  LI    R  K  K   ++  M E+ + P+
Sbjct: 176 KTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPN 233


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 210/400 (52%), Gaps = 38/400 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V+Y T++ GLC      +A AL   M+   +  DVVTY +LI GLC A++ + A  
Sbjct: 120 RPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALE 179

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM   GVQP+VV ++ ++   C++G+  +  ++ + M +R ++P+   ++ L+D  C
Sbjct: 180 LLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLC 239

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK  +A ++   M   G + + V+YN+LIN  CK   V EAL+L +EM  KG+ P VV
Sbjct: 240 KEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVV 299

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDD--VAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           TYNTL  GL  + +++ A+   EEM + D  V  D  T+N+ I GLCK G + +AV++  
Sbjct: 300 TYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVRE 359

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG----- 305
            +    C  ++  YN LI G  +  ++++A+ L   L    L  D  TY+I+I+G     
Sbjct: 360 MMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMW 419

Query: 306 ------------------------------LCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
                                         +C  G M++A  LF +M++N    + I + 
Sbjct: 420 EVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNC-GLDAIAYS 478

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
           T+IHG  +      V +L+  M ++ + PDA   SM++++
Sbjct: 479 TMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINM 518



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 206/434 (47%), Gaps = 71/434 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + + VTY T+I GLC    +D A  L  +M G  + P+VV Y+ L+ G C +  W +  +
Sbjct: 155 RADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGK 214

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +M  +G++P V+ F  ++D+LCK GK  +A+++ D+MVQR + PN  TY+ L++  C
Sbjct: 215 VFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLC 274

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-------- 184
             G +  A  L   M+  G   D V+YN LI G     E++EA+S   EM+         
Sbjct: 275 KEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPD 334

Query: 185 -----------------------------KGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
                                        +G    +VTYN L  G   +H+V+ A+ L +
Sbjct: 335 VVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMD 394

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEA-------------VELF------------- 249
           E+    +  D+ TY+  I+G  K   +  A              ELF             
Sbjct: 395 ELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQG 454

Query: 250 ---RTLGILK-----CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
              R +G+       C LD  AY+ +I G CKSG ++   +L + +    L  D VTY++
Sbjct: 455 MMERAMGLFNEMDKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSM 514

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +I+     G +++A  +   M  +   P+V +F +LI G+    +  KV++L+H+M+ K 
Sbjct: 515 LINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKN 574

Query: 362 VMPDASIVSMVVDL 375
           V  D  I+S ++ L
Sbjct: 575 VAFDPKIISTIIRL 588



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 123/239 (51%), Gaps = 1/239 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           V +P+ VT+N++I GLCK G + +A  +   M       ++VTYN LI G    +    A
Sbjct: 330 VVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMA 389

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             L  E+   G++P   T++++++   K  ++D A + L  M QR ++   F Y  L+  
Sbjct: 390 MNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAA 449

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  G + RA  LF  M+   C  D ++Y+ +I+G CK+ +++    L ++M+ +G+ P 
Sbjct: 450 MCQQGMMERAMGLFNEMDK-NCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPD 508

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VTY+ L     ++  +E A ++ ++M       D + +++ I G    G   + ++L 
Sbjct: 509 AVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLI 567



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 14/223 (6%)

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTV---VTYNTLFLGLFEI--HQVEHALKLFEE 216
           L+N   +   V EA SL   +      P V   V+YNT+   L       +  A  L  +
Sbjct: 57  LLNRRLRGAPVTEACSLLSAL------PDVRDAVSYNTVLAALCRRGGDHLRQARSLLVD 110

Query: 217 MQRDDVAA---DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
           M R+   A   +  +Y T + GLC +    EAV L R++       D+  Y  LI GLC 
Sbjct: 111 MSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCD 170

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           +  L+ ALEL   +    +  +VV Y+ ++ G C  G+      +F DM    + P+VI+
Sbjct: 171 ASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIM 230

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           F  LI    +  K  K  ++   M ++ + P+    +++++ L
Sbjct: 231 FTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSL 273


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 198/363 (54%), Gaps = 1/363 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+   +N ++ G  +   ++KA+ ++  M      PD V+Y+ LIHGL      +E+ 
Sbjct: 41  CNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESL 100

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++  EM+ +G  PS+  ++ ++  L K  ++D AS L D M++    P+   +  L+ G 
Sbjct: 101 KILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGL 160

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+  A E F  M   GC+ +   YN+L++G C + ++E+A +L+ EM S    P V
Sbjct: 161 CQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDV 220

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL   + +  +VE   KLFE M+      +  T++T I GLC+ G + +A+E+F +
Sbjct: 221 VTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGS 280

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ +   Y  LI GLC++ ++  A ELF  + +  +  D V YN +I G C  G 
Sbjct: 281 MLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGS 340

Query: 312 MDKAHDLFLDMEENA-VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           MD+A  L+ +M   A + P ++ F TLI GF ++ K  +  EL+ +M  K +  D+    
Sbjct: 341 MDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYR 400

Query: 371 MVV 373
           +++
Sbjct: 401 ILI 403



 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 182/350 (52%), Gaps = 1/350 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + +  +I GLC+ G V  A   F QM      P+V  YN L+HGLC +    +A  L
Sbjct: 148 PDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTL 207

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM      P VVT+N ++D +CK  +++E  +L + M      PN  T+STL+ G C 
Sbjct: 208 FAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCR 267

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG++ +A E+FGSM   GCK +  +Y  LI+G C+ ++V +A  L+ +M    I P  V 
Sbjct: 268 TGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVA 327

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT-STYNTFIDGLCKNGYIVEAVELFRTL 252
           YN+L  G  +   ++ A KL+ EM        T  T+NT IDG CK G +  A EL   +
Sbjct: 328 YNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEM 387

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           G      D   Y  LI GL ++ +L+ ALE+++ +  +  + D V+    + GLC  G +
Sbjct: 388 GTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNI 447

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           D+A+ +F    ++   PN   F  L    +++ +     +L+   K + +
Sbjct: 448 DQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDI 497



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 110/308 (35%), Positives = 177/308 (57%), Gaps = 1/308 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN   YN ++ GLC  G +++A  LF +MK  + +PDVVTYN+L+  +C A    E  
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +LF  M   G  P+V+TF+ ++  LC+ G++++A  +   M++   +PN +TY+TL+ G 
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIKPT 190
           C   K+ +A ELF  M       D V+YN LI GYCK   ++EA  LYREM    G++PT
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPT 360

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           +VT+NTL  G  ++ ++  A +L  EM    +AAD+ TY   I GL +   + EA+E+++
Sbjct: 361 IVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYK 420

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +   K  LD  +    + GLCK+G ++ A  +F +  +   V +  T+ I+   L   G
Sbjct: 421 QMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLG 480

Query: 311 QMDKAHDL 318
           +++ A  L
Sbjct: 481 RVEDAQKL 488



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 189/364 (51%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   Y++++  L K   VD A +LF +M     +PD + +  LI GLC A    +A   
Sbjct: 113 PSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASER 172

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M   G QP+V  +NV++  LC +G++++A+ L   M      P+  TY+TL+D  C 
Sbjct: 173 FKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCK 232

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++    +LF +M + G   + ++++ LI+G C+  E+E+AL ++  M+  G KP   T
Sbjct: 233 ARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYT 292

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           Y TL  GL    +V  A +LFE+M +  +  D   YN+ I G CK G + EA +L+R + 
Sbjct: 293 YTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMS 352

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           G    +  I  +N LIDG CK G+L  A EL   +  + L AD  TY I+I GL    ++
Sbjct: 353 GGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKL 412

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A +++  M E     + +  V+ + G  +     +   +    ++   +P+     ++
Sbjct: 413 DEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRIL 472

Query: 373 VDLL 376
            + L
Sbjct: 473 SESL 476



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 168/325 (51%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           M+ +NI  +V TY+S+I  L       E+ ++  EMM  G  P V  FN +M    ++  
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           M++A  +   MV+   +P+  +Y  L+ G    GK++ + ++   M   G      +Y+ 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L+    K + V+ A SL+ EM+  G  P  + +  L LGL +  +V+ A + F++M +  
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              +   YN  + GLC +G + +A  LF  +    C  D+  YN L+D +CK+ R+E   
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           +LF ++     V +V+T++ +IHGLC  G+++KA ++F  M E    PN   + TLI G 
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 342 VRINKPSKVIELLHKMKEKKVMPDA 366
            R  K  +  EL  KM +  + PDA
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDA 325



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 114/215 (53%), Gaps = 1/215 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN  TY T+I GLC+   V +A+ LF +M    I PD V YNSLI G C     +EA+
Sbjct: 286 CKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAE 345

Query: 72  RLFFEMMD-QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           +L+ EM    G+QP++VTFN ++D  CK GK+  A+ L+  M  + +  ++ TY  L+ G
Sbjct: 346 KLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAG 405

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
                K++ A E++  M       D VS    + G CK   +++A +++      G  P 
Sbjct: 406 LSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPN 465

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
             T+  L   L ++ +VE A KL E  +  D+ A 
Sbjct: 466 PETFRILSESLIKLGRVEDAQKLMEPAKARDITAQ 500



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 104/217 (47%)

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y+ +I    K  + EE+  +  EM++ G  P V  +N +  G    + +E A ++++ M
Sbjct: 12  TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 71

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
                  D  +Y+  I GL K G + E++++   + +      +QAY+ L+  L K+ R+
Sbjct: 72  VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRV 131

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A  LF  + R     D + +  +I GLC  G++  A + F  M ++   PNV ++  L
Sbjct: 132 DHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVL 191

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +HG     +  +   L  +MK     PD    + ++D
Sbjct: 192 LHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLD 228



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 67/135 (49%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G   +P  VT+NT+IDG CK G + +A  L  +M  + +  D  TY  LI GL  A   +
Sbjct: 354 GAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLD 413

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  ++ +M ++      V+    +  LCK G +D+A  + +   +    PN  T+  L 
Sbjct: 414 EALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILS 473

Query: 129 DGFCLTGKINRAEEL 143
           +     G++  A++L
Sbjct: 474 ESLIKLGRVEDAQKL 488



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 89/192 (46%)

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M  K I   V TY+++   L +  + E + K+ EEM       D   +N  + G  ++  
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           + +A E+++ +     + D  +Y+ LI GL K G+L+ +L++   +  R     +  Y+ 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           ++  L    ++D A  LF +M      P+ ++F  LI G  +  K     E   +M +  
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 362 VMPDASIVSMVV 373
             P+  + ++++
Sbjct: 181 CQPNVPVYNVLL 192



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/113 (23%), Positives = 53/113 (46%)

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
           Y+ +I  L K  + E + ++   +       DV  +N ++ G      M+KA +++  M 
Sbjct: 13  YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 72

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           E+   P+ + +  LIHG  +I K  + +++L +M  +   P     S +V  L
Sbjct: 73  ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL 125


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 193/365 (52%), Gaps = 3/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYN II+G+C+E  VD A+ +  ++      PD V+Y +++ GLC A  W + +
Sbjct: 203 CTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVE 262

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM++    P+ VTF++++   C+ G ++ A  +LD M +     N    + +++  
Sbjct: 263 VLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSI 322

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A E   +M S GC  D +SY  ++ G C+    E+A  L  EMV K   P  
Sbjct: 323 CKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNE 382

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NT    L +   ++ A+ L E+M     +    TYN  ++G C  G +  A+ELF +
Sbjct: 383 VTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNS 442

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L    CE +   Y  L+ GLC + RL+ A EL   + +     +VVT+N+++   C  G 
Sbjct: 443 L---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGF 499

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A +L   M E+   PN+I F TL+ G        + +ELLH +  K +  D    S 
Sbjct: 500 VEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSS 559

Query: 372 VVDLL 376
           +VD+L
Sbjct: 560 IVDVL 564



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 189/363 (52%), Gaps = 3/363 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ VTY  +++ +CK     +A  +  +M+ +   P++VTYN +I+G+C  +  ++A+
Sbjct: 168 CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDAR 227

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++   +   G QP  V++  ++  LC   + ++   L   MV+ +  PN  T+  L+  F
Sbjct: 228 QILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFF 287

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + RA E+   M   GC  +    NI+IN  CK   V++A      M S G  P  
Sbjct: 288 CRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDT 347

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++Y T+  GL    + E A +L  EM R +   +  T+NTFI  LC+ G I +A+ L   
Sbjct: 348 ISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQ 407

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C + I  YN L++G C  GR++ ALELF SLP      + +TY  ++ GLC+  +
Sbjct: 408 MPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLP---CEPNTITYTTLLTGLCHAER 464

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D A +L  +M +N    NV+ F  L+  F +     + IEL+ +M E    P+    + 
Sbjct: 465 LDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNT 524

Query: 372 VVD 374
           ++D
Sbjct: 525 LLD 527



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 173/340 (50%), Gaps = 3/340 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
            YNT++ G C+ G +D A+ L   M    + PD  TY  LI GLC      +A  L  +M
Sbjct: 107 AYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDM 163

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           + +  QPSVVT+ V+++ +CK+    +A ++LD M  +   PN  TY+ +++G C   ++
Sbjct: 164 LRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRV 223

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A ++   + S G + D VSY  ++ G C  K  E+   L+ EMV     P  VT++ L
Sbjct: 224 DDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDML 283

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
                    VE A+++ + M      A+T+  N  I+ +CK G + +A E    +G   C
Sbjct: 284 VRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGC 343

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D  +Y  ++ GLC++GR E A EL   + R+    + VT+N  I  LC  G +D+A  
Sbjct: 344 SPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAIL 403

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           L   M E   +  ++ +  L++GF    +    +EL + +
Sbjct: 404 LIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL 443



 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 173/332 (52%), Gaps = 3/332 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  NT   N +I+ +CK+G VD A      M     +PD ++Y +++ GLC A  W +AK
Sbjct: 308 CTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAK 367

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+ +   P+ VTFN  +  LC+ G +D+A  L++ M +        TY+ L++GF
Sbjct: 368 ELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGF 427

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C+ G+++ A ELF S+    C+ + ++Y  L+ G C  + ++ A  L  EM+       V
Sbjct: 428 CVQGRVDSALELFNSLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNV 484

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+N L     +   VE A++L ++M       +  T+NT +DG+ ++    EA+EL   
Sbjct: 485 VTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHG 544

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L      LD   Y+ ++D L +  R+E A+++F ++    +    V YN ++  LC   +
Sbjct: 545 LVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCE 604

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            D+A D F  M  N+  PN   +V LI G  R
Sbjct: 605 TDRAIDFFAHMVSNSCMPNESTYVILIEGLAR 636



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 173/331 (52%), Gaps = 5/331 (1%)

Query: 3   NGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC 62
           N  G  G  C P+T++Y T++ GLC+ G  + AK L  +M  +N  P+ VT+N+ I  LC
Sbjct: 336 NNMGSYG--CSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILC 393

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
                ++A  L  +M + G    +VT+N +++  C  G++D A   L+L       PN  
Sbjct: 394 QKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSA---LELFNSLPCEPNTI 450

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TY+TL+ G C   +++ A EL   M    C  + V++N+L++ +C+   VEEA+ L ++M
Sbjct: 451 TYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQM 510

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
           +  G  P ++T+NTL  G+ E    E AL+L   +    ++ DT TY++ +D L +   I
Sbjct: 511 MEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRI 570

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            EAV++F  +  +        YN ++  LCK    + A++ F  +     + +  TY I+
Sbjct: 571 EEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVIL 630

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           I GL  +G + +A  +  ++    V    +I
Sbjct: 631 IEGLAREGLLKEARYVLSELCSRGVLSKSLI 661



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 184/365 (50%), Gaps = 3/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VT++ ++   C+ G V++A  +  +M       +    N +I+ +C     ++A 
Sbjct: 273 CVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAF 332

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                M   G  P  +++  ++  LC+ G+ ++A  LL+ MV+++  PN  T++T +   
Sbjct: 333 EFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICIL 392

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I++A  L   M   GC    V+YN L+NG+C    V+ AL L+  +     +P  
Sbjct: 393 CQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNT 449

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY TL  GL    +++ A +L  EM ++D   +  T+N  +   C+ G++ EA+EL + 
Sbjct: 450 ITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQ 509

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  ++  +N L+DG+ +    E ALEL   L  + +  D +TY+ ++  L  + +
Sbjct: 510 MMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDR 569

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A  +F  +++  + P  +++  ++    +  +  + I+    M     MP+ S   +
Sbjct: 570 IEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVI 629

Query: 372 VVDLL 376
           +++ L
Sbjct: 630 LIEGL 634



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 149/317 (47%), Gaps = 3/317 (0%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           PDV     LI  LC     ++A R+       G    V  +N ++   C+ G++D A RL
Sbjct: 68  PDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRL 127

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
           +  M    V P+A+TY+ L+ G C  G++  A  L   M    C+   V+Y +L+   CK
Sbjct: 128 IASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCK 184

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
           +    +A+ +  EM +KG  P +VTYN +  G+    +V+ A ++   +       DT +
Sbjct: 185 SSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVS 244

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           Y T + GLC      +   LF  +    C  +   ++ L+   C+ G +E A+E+   + 
Sbjct: 245 YTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMS 304

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
                A+    NI+I+ +C  G++D A +   +M     +P+ I + T++ G  R  +  
Sbjct: 305 EHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWE 364

Query: 349 KVIELLHKMKEKKVMPD 365
              ELL++M  K   P+
Sbjct: 365 DAKELLNEMVRKNCPPN 381



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 132/273 (48%), Gaps = 3/273 (1%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           + EA+RL++    R   P+ +  + L+   C  G+ + A  +  + E  G   D  +YN 
Sbjct: 51  LAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNT 110

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L+ GYC+   ++ A  L   + S  + P   TY  L  GL +  +V  AL L ++M R +
Sbjct: 111 LVAGYCRYGRLDAARRL---IASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRE 167

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
                 TY   ++ +CK+    +A+++   +    C  +I  YN +I+G+C+  R++ A 
Sbjct: 168 CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDAR 227

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           ++   L       D V+Y  ++ GLC   + +    LF +M EN   PN + F  L+  F
Sbjct: 228 QILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFF 287

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            R     + IE+L +M E     + ++ ++V++
Sbjct: 288 CRGGMVERAIEVLDRMSEHGCTANTTLCNIVIN 320


>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 426

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 199/346 (57%), Gaps = 9/346 (2%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           + NG  + G    P+   Y+ II+ LCK+  V  A  L+ +M  + I PDVVTYN+LI+G
Sbjct: 86  LINGLCKSGETKAPDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYG 145

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
            C      +A RLF EM  + + P+V +FN+++D LCK G +     +L +M+++ V+P+
Sbjct: 146 FCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPD 205

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             T S+L+DG+ L  K N+A  +F +M   G   D  SYNI+ING  K K V+EA+ L++
Sbjct: 206 VVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFK 265

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           EM  K + P  +TY+TL  GL ++ ++ +   L +EM+    +A+  TY++ ++ LCK+G
Sbjct: 266 EMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSG 325

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
           +   A+ +F  +     E ++  YN L+DGLCK+GRL+ A E+F  L  +    DV  Y 
Sbjct: 326 HFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYT 385

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +MI+GLC +   D+A+            PN + +  +I    + +K
Sbjct: 386 VMINGLCREALFDEAY---------GCTPNAVTYEIIIRALFKNDK 422



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 180/362 (49%), Gaps = 14/362 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+TVT  T++ GLC    V KA      +  +    D V+Y +LI+GLC + +     +
Sbjct: 42  QPDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQ 101

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             + M              I++ LCK+  + +A  L   MV + + P+  TY+TL+ GFC
Sbjct: 102 FMYSM--------------IINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFC 147

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + G++  A  LF  M       +  S+NILI+G CK  +V+   S+   M+ + +KP VV
Sbjct: 148 IVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVV 207

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T ++L  G F + +   A  +F  M ++ V  D  +YN  I+GL K   + EAV LF+ +
Sbjct: 208 TCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEM 267

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D   Y+ LIDGL K GR+    +L   +      A+V+TY+ +++ LC  G  
Sbjct: 268 QFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHF 327

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  +F  +++    PN++ +  L+ G  +  +     E+ H +  K    D  + +++
Sbjct: 328 DTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVM 387

Query: 373 VD 374
           ++
Sbjct: 388 IN 389



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 164/317 (51%), Gaps = 14/317 (4%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           M+   I  D++  + LI+   H    N A  +  +++  G QP  VT   ++  LC N +
Sbjct: 1   MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           + +A    D ++ +  R +  +Y TL++G C +G+    ++                Y++
Sbjct: 61  VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQFM--------------YSM 106

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           +IN  CK+K V +A  LY EMV K I P VVTYNTL  G   + Q+E A++LF EM+  +
Sbjct: 107 IINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN 166

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           +  +  ++N  IDGLCK G +     +   +     + D+   + LIDG     +   A 
Sbjct: 167 IVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKAR 226

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            +F ++ +  +  D+ +YNIMI+GL     +D+A  LF +M+  ++ P+ I + TLI G 
Sbjct: 227 YIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGL 286

Query: 342 VRINKPSKVIELLHKMK 358
            ++ + S V +L+ +M+
Sbjct: 287 GKLGRISYVWDLIDEMR 303



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 119/240 (49%), Gaps = 21/240 (8%)

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           ME  G + D ++ +ILIN +    ++  A S+  +++  G +P  VT  TL  GL   ++
Sbjct: 1   MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG---------------------YIVEA 245
           V+ AL   +++       D  +Y T I+GLCK+G                      +V+A
Sbjct: 61  VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQFMYSMIINRLCKDKLVVDA 120

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            +L+  + + +   D+  YN LI G C  G+LE A+ LF  +  + +V +V ++NI+I G
Sbjct: 121 YDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDG 180

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC +G +     +   M + +V P+V+   +LI G+  + K +K   + + M +  V  D
Sbjct: 181 LCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTID 240


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 205/400 (51%), Gaps = 36/400 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  V+Y T++  LC E    +A  L   M+   + PDVVTY +LI GLC A D ++A  
Sbjct: 110 RPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVE 169

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM + G++P+VV ++ ++   CK G+ +  S++ + M  R + P+   Y+ L+D  C
Sbjct: 170 LLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLC 229

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+ +A ++   M   G + + V+YN+LIN  CK   V+EA+SL   M+ KG+    V
Sbjct: 230 REGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAV 289

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDD--VAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           TYNTL  GL  + +++ A+ L EEM   +  V  +  T+N+ I GLCK G + +A ++  
Sbjct: 290 TYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRD 349

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C  ++  +N LI GL +  +++ A+EL   +    L  D  TY+I+I+G C   
Sbjct: 350 MMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMW 409

Query: 311 QMDKAHDLFLDMEENAVAP----------------------------------NVIIFVT 336
           Q+D+A  L   M  + + P                                  +V+ + T
Sbjct: 410 QVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYST 469

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +IHG  R+       E L  M ++ ++PD+   SM++++ 
Sbjct: 470 MIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMF 509



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 204/397 (51%), Gaps = 38/397 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V Y+ ++ G CK G  +    +F +M G  I PDVV Y  LI  LC      +A +
Sbjct: 180 EPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQ 239

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNG-------------------------------- 100
           +  +MM++G++P+VVT+NV+++ +CK G                                
Sbjct: 240 VMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLS 299

Query: 101 ---KMDEASRLLDLMVQRD--VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHD 155
              +MDEA  LL+ M+  +  V PN  T+++++ G C TG++ +A ++   M   GC  +
Sbjct: 300 GVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACN 359

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
            V++N+LI G  +  +V++A+ L  EM S G++P   TY+ L  G  ++ QV+ A  L  
Sbjct: 360 LVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLS 419

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
           +M+RD +  +   Y   +  LC+ G + +A   F  +    C+LD+ AY+ +I G C+  
Sbjct: 420 KMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHK-NCKLDVVAYSTMIHGACRLR 478

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
             + A E  + +    L+ D VTY+++I+   N G +  A  +   M  +   P+V +F 
Sbjct: 479 DRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFD 538

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +LI G+       KV+EL+ +M  K +  D+ I+S +
Sbjct: 539 SLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTI 575



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 182/353 (51%), Gaps = 2/353 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + V+YNT++  LC++G    A    L++      P  V+Y +L+  LC      +A  L 
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M   GV+P VVT+  ++  LC    +D+A  LL  M +  + PN   YS L+ G+C  
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+     ++F  M   G + D V Y  LI+  C+  +V++A  +  +M+ +G++P VVTY
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL-- 252
           N L   + +   V+ A+ L   M    VA D  TYNT I GL     + EA+ L   +  
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIH 316

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           G    E ++  +N +I GLCK+GR+  A ++   +       ++VT+N++I GL    ++
Sbjct: 317 GETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKV 376

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            KA +L  +M  + + P+   +  LI+GF ++ +  +   LL KM+   + P+
Sbjct: 377 KKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPE 429



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 84  PSV---VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           PSV   V++N ++  LC+ G   +A+  L  ++  + RP A +Y+TLM   C   +  +A
Sbjct: 73  PSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQA 132

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
             L   M++ G + D V+Y  LI G C   +V++A+ L REM   GI+P VV Y+ L  G
Sbjct: 133 VGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQG 192

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
             +  + E   K+FEEM    +  D   Y   ID LC+ G + +A ++   +     E +
Sbjct: 193 YCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPN 252

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM------------------ 302
           +  YN LI+ +CK G ++ A+ L  ++  + +  D VTYN +                  
Sbjct: 253 VVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLE 312

Query: 303 -------------------IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
                              IHGLC  G+M +A  +   M EN  A N++ F  LI G +R
Sbjct: 313 EMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLR 372

Query: 344 INKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           ++K  K +EL+ +M    + PD+   S++++
Sbjct: 373 VHKVKKAMELMDEMASSGLEPDSFTYSILIN 403



 Score =  121 bits (304), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 111/221 (50%), Gaps = 2/221 (0%)

Query: 147 MESMGCKHDDVSYNILINGYCKNKE-VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 205
           + S+    D VSYN ++   C+    ++ AL L R M  +  +PT V+Y TL   L    
Sbjct: 69  LSSLPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHE-TRPTAVSYTTLMRALCAER 127

Query: 206 QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYN 265
           +   A+ L  +MQ   V  D  TY T I GLC    + +AVEL R +     E ++  Y+
Sbjct: 128 RTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYS 187

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
           CL+ G CK+GR E   ++F  +  R +  DVV Y  +I  LC +G++ KA  +   M E 
Sbjct: 188 CLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMER 247

Query: 326 AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            + PNV+ +  LI+   +     + + L + M EK V  DA
Sbjct: 248 GLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDA 288



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 111/228 (48%), Gaps = 1/228 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N VT+N +I GL +   V KA  L  +M    + PD  TY+ LI+G C     + A+
Sbjct: 356 CACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAE 415

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +M   G++P +V +  ++  LC+ G M++A    D M  ++ + +   YST++ G 
Sbjct: 416 SLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMIHGA 474

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C       AEE    M   G   D V+Y++LIN +  + ++  A  + ++M + G  P V
Sbjct: 475 CRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDV 534

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
             +++L  G       E  L+L  EM   D+A D+   +T    L  N
Sbjct: 535 AVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLVAN 582



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 77/152 (50%)

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           D  +YNT +  LC+ G  ++A      +   +      +Y  L+  LC   R   A+ L 
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
           R +    +  DVVTY  +I GLC+   +DKA +L  +M E+ + PNV+++  L+ G+ + 
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +   V ++  +M  + + PD  + + ++D L
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSL 228


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 117/361 (32%), Positives = 196/361 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNTI+  LC  G + +A  +  +       PDV+TY  LI   C+ +   +A +L
Sbjct: 207 PDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKL 266

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G +P VVT+NV+++ +CK G++DEA + L+ M     +PN  T++ ++   C 
Sbjct: 267 LDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCS 326

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG+   AE L   M   GC    V++NILIN  C+ + +  A+ +  +M   G  P  ++
Sbjct: 327 TGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLS 386

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +  +++ A++  E M       D  TYNT +  LCK+G    AVE+   L 
Sbjct: 387 YNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLS 446

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C   +  YN +IDGL K G+ E A EL   + R+ L  D++TY+ ++ GL  +G++D
Sbjct: 447 SKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVD 506

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  +F DME  ++ P+ + +  ++ G  +  + S+ I+ L  M EK   P  +  ++++
Sbjct: 507 EAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILI 566

Query: 374 D 374
           +
Sbjct: 567 E 567



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 184/352 (52%), Gaps = 3/352 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +   ++I G C+ G   KA  +   ++     PDV+TYN LI G C + + ++A ++
Sbjct: 140 PDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQV 199

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M    V P VVT+N I+  LC +GK+ EA  +LD  +QR+  P+  TY+ L++  C 
Sbjct: 200 LERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCN 256

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              + +A +L   M   GCK D V+YN+LING CK   ++EA+     M   G +P V+T
Sbjct: 257 DSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVIT 316

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N +   +    +   A +L  +M R   +    T+N  I+ LC+   +  A+++   + 
Sbjct: 317 HNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMP 376

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  +  +YN L+ G C+  +++ A+E    +  R    D+VTYN ++  LC DG+ D
Sbjct: 377 KHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKAD 436

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            A ++   +     +P +I + T+I G  ++ K     ELL +M+ K + PD
Sbjct: 437 AAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPD 488



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 172/297 (57%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+ VTYN +I+G+CKEG +D+A      M      P+V+T+N ++  +C    W +A+
Sbjct: 275 CKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAE 334

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL  +M+ +G  PSVVTFN++++ LC+   +  A  +L+ M +    PN+ +Y+ L+ GF
Sbjct: 335 RLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGF 394

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++RA E    M S GC  D V+YN L+   CK+ + + A+ +  ++ SKG  P +
Sbjct: 395 CQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVL 454

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYNT+  GL ++ + E+A +L EEM+R  +  D  TY+T + GL   G + EA+++F  
Sbjct: 455 ITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHD 514

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           +  L  +     YN ++ GLCK+ +   A++    +  +       TY I+I G+ +
Sbjct: 515 MEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIAD 571



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 174/331 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY  +I+  C +  V +A  L  +M+ +   PDVVTYN LI+G+C     +EA 
Sbjct: 240 CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAI 299

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +    M   G QP+V+T N+I+  +C  G+  +A RLL  M+++   P+  T++ L++  
Sbjct: 300 KFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFL 359

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    + RA ++   M   GC  + +SYN L++G+C+ K+++ A+     MVS+G  P +
Sbjct: 360 CRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDI 419

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL   L +  + + A+++  ++     +    TYNT IDGL K G    A EL   
Sbjct: 420 VTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEE 479

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DI  Y+ L+ GL   G+++ A+++F  +    +    VTYN ++ GLC   Q
Sbjct: 480 MRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQ 539

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
             +A D    M E    P    +  LI G  
Sbjct: 540 TSRAIDFLAYMVEKGCKPTKATYTILIEGIA 570



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 156/277 (56%), Gaps = 3/277 (1%)

Query: 90  NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
           N+ + +L +NG+++E  + L+ M+ +   P+    ++L+ GFC +GK  +A  +   +E+
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
            G   D ++YN+LI GYCK+ E+++AL +   M    + P VVTYNT+   L +  +++ 
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKE 227

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           A+++ +   + +   D  TY   I+  C +  + +A++L   +    C+ D+  YN LI+
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           G+CK GRL+ A++   ++P      +V+T+NI++  +C+ G+   A  L  DM     +P
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +V+ F  LI+   R     + I++L KM +   MP++
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNS 384



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 158/308 (51%), Gaps = 3/308 (0%)

Query: 58  IHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV 117
           +  L    +  E  +    M+ QG  P V+    ++   C++GK  +A+R+++++     
Sbjct: 114 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGA 173

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
            P+  TY+ L+ G+C +G+I++A ++   +E M    D V+YN ++   C + +++EA+ 
Sbjct: 174 VPDVITYNVLIGGYCKSGEIDKALQV---LERMSVAPDVVTYNTILRSLCDSGKLKEAME 230

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           +    + +   P V+TY  L         V  A+KL +EM++     D  TYN  I+G+C
Sbjct: 231 VLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 290

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           K G + EA++    + +  C+ ++  +N ++  +C +GR   A  L   + R+     VV
Sbjct: 291 KEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVV 350

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           T+NI+I+ LC    + +A D+   M ++   PN + +  L+HGF +  K  + IE L  M
Sbjct: 351 TFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIM 410

Query: 358 KEKKVMPD 365
             +   PD
Sbjct: 411 VSRGCYPD 418



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 3/222 (1%)

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D ++   LI G+C++ +  +A  +   + + G  P V+TYN L  G  +  +++ AL++ 
Sbjct: 141 DVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVL 200

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           E M    VA D  TYNT +  LC +G + EA+E+       +C  D+  Y  LI+  C  
Sbjct: 201 ERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCND 257

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
             +  A++L   + ++    DVVTYN++I+G+C +G++D+A     +M      PNVI  
Sbjct: 258 SGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITH 317

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             ++       +      LL  M  K   P     +++++ L
Sbjct: 318 NIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFL 359



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 3/211 (1%)

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           ++ + NI +    +N E+EE L     M+ +G  P V+   +L  G     +   A ++ 
Sbjct: 106 EEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIM 165

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           E ++      D  TYN  I G CK+G I +A+++   + +     D+  YN ++  LC S
Sbjct: 166 EILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAP---DVVTYNTILRSLCDS 222

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G+L+ A+E+     +R    DV+TY I+I   CND  + +A  L  +M +    P+V+ +
Sbjct: 223 GKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY 282

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             LI+G  +  +  + I+ L+ M      P+
Sbjct: 283 NVLINGICKEGRLDEAIKFLNNMPLYGCQPN 313



 Score = 38.9 bits (89), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 26/53 (49%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGL 61
           G+  KP+ VTYN I+ GLCK     +A      M  +   P   TY  LI G+
Sbjct: 517 GLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 189/362 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +  T+N +I G    G V+KA AL L+M+ E I P VVTYN++IHG+  + +   A+ 
Sbjct: 299 KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARM 358

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM   G+ P ++T+N +++  CK G + EA  L   + +  + P+  TY+ L+DG+C
Sbjct: 359 KFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYC 418

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A      M   GC+ D  +Y IL+NG  K + +      + EM+SKG++P   
Sbjct: 419 RLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCF 478

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YNT       +     A +L E M    +++DT TYN F+DGLCK+G + +A  L+  +
Sbjct: 479 AYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKM 538

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D   Y CLI   C+ GRL  A ++F  +    L    VTY + IH  C  G +
Sbjct: 539 VSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNL 598

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A+  F  M E  V PN + +  LIH   R+ + +   +  H+M E+ + P+    +++
Sbjct: 599 YSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLL 658

Query: 373 VD 374
           +D
Sbjct: 659 ID 660



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 186/367 (50%), Gaps = 43/367 (11%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTYNTII G+ + G V+ A+  F++M+   + PD++TYNSLI+G C A +  EA  L
Sbjct: 335 PTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWL 394

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG--- 130
           F ++   G+ PSV+T+N+++D  C+ G ++EA R    MV++  +P+  TY+ LM+G   
Sbjct: 395 FGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRK 454

Query: 131 -----------------------FCLTGKINRAEELFGS----------MESMGCKHDDV 157
                                  F    +I+ AE + GS          M S G   D V
Sbjct: 455 VRNLAMVREFFDEMLSKGLQPDCFAYNTRIS-AELILGSTSEAFQLTEVMISRGISSDTV 513

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +YNI ++G CK+  +++A  L+ +MVS G++P  +TY  L     E  ++  A  +F+ M
Sbjct: 514 TYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGM 573

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCKS 274
               +     TY  FI   C+ G +  A   F+ +   G+   E+    YN LI  LC+ 
Sbjct: 574 LVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEV---TYNVLIHALCRM 630

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           GR  +A + F  +  R L  +  TY ++I G C +G  ++A  L+ +M ++ + P+    
Sbjct: 631 GRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTH 690

Query: 335 VTLIHGF 341
             L  GF
Sbjct: 691 NALFKGF 697



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 173/342 (50%), Gaps = 3/342 (0%)

Query: 37  ALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
           A F +M    + P +   N ++  L     W++ + ++ EM+  G++PS+VT+N ++D  
Sbjct: 182 AAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSF 241

Query: 97  CKNGKMDEASRLLDLMVQRD--VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            + G++D+A++LL  M  R     P+  TY+ +++G    G++ +A +L   M  M  K 
Sbjct: 242 FREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMR-MSKKA 300

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
              ++N LI GY     VE+A +L  EM ++GI PTVVTYNT+  G+F    VE A   F
Sbjct: 301 SAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKF 360

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
            EM+   +  D  TYN+ I+G CK G + EA+ LF  L        +  YN L+DG C+ 
Sbjct: 361 VEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRL 420

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G LE A    + +  +    DV TY I+++G      +    + F +M    + P+   +
Sbjct: 421 GDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAY 480

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            T I   + +   S+  +L   M  + +  D    ++ +D L
Sbjct: 481 NTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGL 522



 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 188/391 (48%), Gaps = 38/391 (9%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N ++  L  E   D  ++++ +M    I P +VTYN+L+         ++A +L  EM  
Sbjct: 200 NLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEA 259

Query: 80  Q--GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +  G  PS VT+NV+++ L + G++++A++L+D M +   + +AFT++ L+ G+   G +
Sbjct: 260 RPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKASAFTFNPLITGYFARGSV 318

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
            +A  L   ME+ G     V+YN +I+G  ++  VE A   + EM + G+ P ++TYN+L
Sbjct: 319 EKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSL 378

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G  +   ++ AL LF +++R  +A    TYN  +DG C+ G + EA    + +    C
Sbjct: 379 INGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGC 438

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSL------P----------------------- 288
           + D+  Y  L++G  K   L +  E F  +      P                       
Sbjct: 439 QPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQ 498

Query: 289 ------RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
                  R + +D VTYNI + GLC  G +  A+ L++ M  + + P+ I +  LIH   
Sbjct: 499 LTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHC 558

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
              +  +  ++   M    + P A   ++ +
Sbjct: 559 ERGRLREARDIFDGMLVSGLPPSAVTYTVFI 589



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 109/201 (54%), Gaps = 1/201 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +TVTYN  +DGLCK G +  A  L+++M  + + PD +TY  LIH  C      EA+ +F
Sbjct: 511 DTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIF 570

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M+  G+ PS VT+ V +   C+ G +  A      M++  VRPN  TY+ L+   C  
Sbjct: 571 DGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRM 630

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+ N A + F  M   G   +  +Y +LI+G CK    EEA+ LY EM   GI P   T+
Sbjct: 631 GRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTH 690

Query: 195 NTLFLGLFEIHQVEHALKLFE 215
           N LF G F+  Q +HA++  E
Sbjct: 691 NALFKG-FDEGQSKHAIQYME 710


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 123/361 (34%), Positives = 193/361 (53%), Gaps = 1/361 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTYNTII G C  G V+ A+ +F  MK   + PD  TY S I G+C      EA  
Sbjct: 223 KPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASG 282

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M + G++P+ VT+N ++D  C  G ++ A    D MV+  + P   TY+ L+    
Sbjct: 283 MLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALF 342

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L  K++ A+ +   M   G   D V+YNILINGYC+   V++A +L+ EM+SKGI+PT V
Sbjct: 343 LDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRV 402

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY +L   L +  +++ A  LFE++ R  +  D   +N  IDG C NG +  A  + + +
Sbjct: 403 TYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEM 462

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +K   D   +N L+ G C+ G++E A EL   +  R +  D ++YN +I G    G M
Sbjct: 463 DQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDM 522

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP-DASIVSM 371
             A  +  +M      P ++ +  LI G  +  +     +LL +M  K + P D + +S+
Sbjct: 523 KDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSL 582

Query: 372 V 372
           +
Sbjct: 583 I 583



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 191/392 (48%), Gaps = 35/392 (8%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GV+     V Y+ +I   C+    D A   F  MKG+ + P V   N ++     +N   
Sbjct: 114 GVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTE 173

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  L+ EM    ++ SVVTFN++++ LCK GK+ +A   + LM    ++PN  TY+T++
Sbjct: 174 KAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTII 233

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G+C  G++  A  +F  M+  G K D  +Y   I+G CK  ++EEA  +  +M   G++
Sbjct: 234 HGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLR 293

Query: 189 PTVVTYNTLFLG-----------------------------------LFEIHQVEHALKL 213
           PT VTYNTL  G                                   LF   +++ A  +
Sbjct: 294 PTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGI 353

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
            +EM    +  D+ TYN  I+G C+ G + +A  L   +     +     Y  LI  L K
Sbjct: 354 IKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSK 413

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
            GR++ A +LF  + R+ +  D++ +N +I G C +G MD+A  +  +M++  V P+ + 
Sbjct: 414 RGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVT 473

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           F TL+ G  R  K     EL+ +MK + + PD
Sbjct: 474 FNTLMQGRCREGKVEAARELIEEMKSRGIKPD 505



 Score =  167 bits (423), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 91/230 (39%), Positives = 137/230 (59%), Gaps = 2/230 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E G+V  P++VTYN +I+G C+ G V KA  L  +M  + I P  VTY SLI+ L     
Sbjct: 359 EKGLV--PDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGR 416

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A  LF +++ +G+ P ++ FN ++D  C NG MD A  +L  M Q  V P+  T++T
Sbjct: 417 MKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNT 476

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           LM G C  GK+  A EL   M+S G K D +SYN LI+GY K  ++++A  +  EM+S G
Sbjct: 477 LMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIG 536

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
             PT++TYN L  GL +  + +HA +L +EM    +  + +TY + I+G+
Sbjct: 537 FNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 164/302 (54%), Gaps = 2/302 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           EIG+  +P  VTYNT+IDG C +G ++ A     +M  E + P V TYN LIH L     
Sbjct: 289 EIGL--RPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCK 346

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            +EA  +  EM ++G+ P  VT+N++++  C+ G + +A  L D M+ + ++P   TY++
Sbjct: 347 MDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTS 406

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+      G++ +A++LF  +   G   D + +N LI+G+C N  ++ A ++ +EM    
Sbjct: 407 LIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMK 466

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P  VT+NTL  G     +VE A +L EEM+   +  D  +YNT I G  K G + +A 
Sbjct: 467 VVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAF 526

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            +   +  +     +  YN LI GLCK+   + A +L + +  + +  +  TY  +I G+
Sbjct: 527 RVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586

Query: 307 CN 308
            N
Sbjct: 587 GN 588



 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 161/323 (49%)

Query: 52  VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL 111
           V Y+ LI   C     ++A   F  M  +GV P V   N ++    K+ + ++A  L   
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           M +  ++ +  T++ +++  C  GK+ +A+E  G ME++G K + V+YN +I+GYC    
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           VE A  ++  M  +G+KP   TY +   G+ +  ++E A  + E+M+   +     TYNT
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            IDG C  G +  A +    +        +  YN LI  L    +++ A  + + +  + 
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           LV D VTYNI+I+G C  G + KA  L  +M    + P  + + +LI+   +  +  +  
Sbjct: 362 LVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQAD 421

Query: 352 ELLHKMKEKKVMPDASIVSMVVD 374
           +L  K+  K + PD  + + ++D
Sbjct: 422 DLFEKIVRKGIFPDLIMFNALID 444



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 107/220 (48%)

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           V Y++LI   C+ K  ++A   +  M  KG+ P V   N +     + ++ E A  L+ E
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M R  + +   T+N  I+ LCK G + +A E    +  L  + ++  YN +I G C  GR
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +E A  +F  +  R +  D  TY   I G+C +G++++A  +   M+E  + P  + + T
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           LI G+          +   KM  + +MP  S  +M++  L
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHAL 341



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 3/205 (1%)

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
           +EV   L + R ++  GIK T V Y+ L     E+ + + A + F+ M+   V       
Sbjct: 103 REVFNELGVARGVL--GIK-TYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHAC 159

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           N  +    K+    +A  L+  +  ++ +  +  +N +I+ LCK G+L+ A E    +  
Sbjct: 160 NDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEA 219

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
             +  +VVTYN +IHG C+ G+++ A  +F  M+   V P+   + + I G  +  K  +
Sbjct: 220 LGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEE 279

Query: 350 VIELLHKMKEKKVMPDASIVSMVVD 374
              +L KMKE  + P A   + ++D
Sbjct: 280 ASGMLEKMKEIGLRPTAVTYNTLID 304


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 139/402 (34%), Positives = 212/402 (52%), Gaps = 37/402 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN+VT  T++DGLCK+G +D+A  L   MK +  + DVV Y +LI G C+  + +  K
Sbjct: 64  CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+ +G+  +VVT++ ++  LC+ G+  EA+ +L+ M +  + P+  TY+ L+DG 
Sbjct: 124 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 183

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+   A +L   M   G +  +V+YN+L++G CK   V +A  + R M+ KG K  V
Sbjct: 184 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADV 243

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDD--VAADTSTYNTFIDGLCKNGYIVEAVELF 249
           VTYNTL  GL +  +V+ ALKLF  M  ++  +  +  T+N  I GLCK G + +AV++ 
Sbjct: 244 VTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH 303

Query: 250 RTL-----------------GILKC-------ELDIQ-----------AYNCLIDGLCKS 274
           R +                 G LK        EL  Q            Y+ LIDG CK 
Sbjct: 304 RKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKM 363

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
             L IA  LF  +    L   +  YN ++  LC +G +++A  LF +M      P++I F
Sbjct: 364 RMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISF 423

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            T+I G ++      V EL  KM E  + PDA   S +++ L
Sbjct: 424 NTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRL 465



 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 121/357 (33%), Positives = 200/357 (56%), Gaps = 2/357 (0%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N ++ GLC+ G V +A  L  +M  ++++PD+V+YN+LI+GLC A    EA  L  EM  
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
            G  P+ VT   +MD LCK+G+MDEA  LL+ M ++    +   Y TL+ GFC  G ++R
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
            +ELF  M   G   + V+Y+ L++G C+  + +EA ++   M   GI P VVTY  L  
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           GL +  +  HA+ L   M          TYN  + GLCK G +++A ++ R +     + 
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSL--PRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           D+  YN L+ GLC  G+++ AL+LF S+      L  +V T+N++I GLC +G++ KA  
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +   M +     N++ +  L+ G ++  K  + +EL  ++ +   +P++   S+++D
Sbjct: 302 IHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILID 358



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 212/434 (48%), Gaps = 72/434 (16%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + V Y T+I G C  G +D+ K LF +M G+ I+ +VVTY+ L+HGLC    W EA  + 
Sbjct: 102 DVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVL 161

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP--------------- 119
             M + G+ P VVT+  ++D LCK+G+   A  LL+LMV++   P               
Sbjct: 162 NAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKE 221

Query: 120 ----NAF----------------TYSTLMDGFCLTGKINRAEELFGSM-ESMGCKHDDV- 157
               +AF                TY+TLM G C  GK++ A +LF SM ++  C   +V 
Sbjct: 222 GLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVF 281

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE-- 215
           ++N+LI G CK   + +A+ ++R+MV KG    +VTYN L  G  +  +++ A++L++  
Sbjct: 282 TFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQV 341

Query: 216 ---------------------------------EMQRDDVAADTSTYNTFIDGLCKNGYI 242
                                            EM+   +      YNT +  LCK G +
Sbjct: 342 LDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSL 401

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            +A  LF+ +G   CE DI ++N +IDG  K+G  +   EL   +    L  D +T++ +
Sbjct: 402 EQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTL 461

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I+ L   G++D+A      M  +   P+ +++ +L+ G       +++I LLH+M  K  
Sbjct: 462 INRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGT 521

Query: 363 MPDASIVSMVVDLL 376
           + D  IVS ++  L
Sbjct: 522 VLDRKIVSTILTCL 535



 Score =  134 bits (337), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 132/262 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  T+N +I GLCKEG + KA  +  +M  +    ++VTYN L+ G   A    EA  
Sbjct: 277 EPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAME 336

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L+ +++D G  P+  T+++++D  CK   ++ A  L   M    + P  F Y+TLM   C
Sbjct: 337 LWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLC 396

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G + +A+ LF  M +  C+ D +S+N +I+G  K  + +    L  +MV  G++P  +
Sbjct: 397 KEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDAL 456

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++TL   L ++ +++ A    E M       D   Y++ + GL   G   E + L   +
Sbjct: 457 TFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQM 516

Query: 253 GILKCELDIQAYNCLIDGLCKS 274
                 LD +  + ++  LC S
Sbjct: 517 AAKGTVLDRKIVSTILTCLCHS 538



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 115/238 (48%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N VTYN ++ G  K G + +A  L+ Q+      P+  TY+ LI G C     N AK LF
Sbjct: 314 NLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLF 373

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM   G+ P++  +N +M  LCK G +++A  L   M   +  P+  +++T++DG    
Sbjct: 374 CEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKA 433

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G     +EL   M  MG + D ++++ LIN   K  E++EA S    MV+ G  P  + Y
Sbjct: 434 GDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVY 493

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           ++L  GL         + L  +M       D    +T +  LC +   V+ +EL  T 
Sbjct: 494 DSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTF 551



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 9/203 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    YNT++  LCKEG +++AK+LF +M   N  PD++++N++I G   A D+   K L
Sbjct: 383 PALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKEL 442

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M++ G++P  +TF+ +++ L K G++DEA   L+ MV     P+A  Y +L+ G   
Sbjct: 443 QMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSS 502

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYC---KNKEVEEALSLYREMVSKGIKPT 190
            G       L   M + G   D    + ++   C   +  +V E L  + +  S+G    
Sbjct: 503 KGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGAS-- 560

Query: 191 VVTYNTLFLGLFEIHQVEHALKL 213
            ++ N L   L ++HQ    L+L
Sbjct: 561 -ISCNEL---LMQLHQSHPKLQL 579



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 59/121 (48%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ +++NT+IDG  K G     K L ++M    + PD +T+++LI+ L    + +EAK
Sbjct: 416 CEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAK 475

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                M+  G  P  + ++ ++  L   G   E   LL  M  +    +    ST++   
Sbjct: 476 SALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCL 535

Query: 132 C 132
           C
Sbjct: 536 C 536


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 200/364 (54%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVT+ T+I  LC+ G +D A   F  M    + P    Y  LI G C+  +  +AK L
Sbjct: 365 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKEL 424

Query: 74  FFEMMDQGVQPSVVT-FNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             EMM++ + P  V  F+ I++ L K G++ E   ++DLMVQ   RPN  T+++LM+G+C
Sbjct: 425 ISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYC 484

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G +  A  L  +M S+G + +   Y  L++GYCKN  +++AL+++R+M+ KG+KPT V
Sbjct: 485 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 544

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN +  GLF+  +   A K+F EM          TY   + GLC+N    EA  L   L
Sbjct: 545 LYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKL 604

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  + DI  +N +I  + K GR + A ELF ++    LV  V TYN+MI  L  +   
Sbjct: 605 FAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESY 664

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A +LF+ +E++  AP+  +   ++   ++  + +K    L  + E  +  +AS +S++
Sbjct: 665 EEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLL 724

Query: 373 VDLL 376
             L 
Sbjct: 725 ASLF 728



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 195/398 (48%), Gaps = 40/398 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND------- 66
           P+  +YNT+IDG  KEG VDKA  LF +M  ++++PDVVTYNSLI GLC   +       
Sbjct: 155 PDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERV 214

Query: 67  ----------------------------WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                                       W E+ R+F EM   G+ P VV  N  +  LC+
Sbjct: 215 LEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCR 274

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           + ++ EA  + D MV +  +PN  +YSTL+ G+   G       L   M S G   +   
Sbjct: 275 HNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRF 334

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +NILIN Y +   +++A+ ++ +M +KG+ P  VT+ T+   L  I +++ AL  F  M 
Sbjct: 335 FNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMV 394

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD---IQAYNCLIDGLCKSG 275
              V    + Y   I G C +G +V+A EL   +  +  ++    ++ ++ +I+ L K G
Sbjct: 395 DIGVPPSEAVYRCLIQGCCNHGELVKAKELISEM--MNKDIPPPGVKYFSSIINNLFKEG 452

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           R+    ++   + +     +VVT+N ++ G C  G M++A  L   M    + PN  I+ 
Sbjct: 453 RVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 512

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           TL+ G+ +  +    + +   M  K V P + + ++++
Sbjct: 513 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIIL 550



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 190/397 (47%), Gaps = 36/397 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TYN +ID   +    + A A+F ++    + PDV +YN+LI G     + ++A  L
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F++M++Q V P VVT+N ++D LCK  +M ++ R+L+ MV   +RPN  TY++L+ G+  
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G    +  +F  M S G     V+ N  I+  C++  ++EA  ++  MV KG KP +++
Sbjct: 240 AGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIIS 299

Query: 194 YNTLFLG---------------------------LFEI--------HQVEHALKLFEEMQ 218
           Y+TL  G                            F I          ++ A+ +FE+MQ
Sbjct: 300 YSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQ 359

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  DT T+ T I  LC+ G + +A+  F  +  +        Y CLI G C  G L 
Sbjct: 360 NKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELV 419

Query: 279 IALELFRSLPRRVLVADVVTY-NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
            A EL   +  + +    V Y + +I+ L  +G++ +  D+   M +    PNV+ F +L
Sbjct: 420 KAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSL 479

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + G+  +    +   LL  M    + P+  I   +VD
Sbjct: 480 MEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 516



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 173/348 (49%), Gaps = 1/348 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TYN++I G    G   ++  +F +M    + P VV  NS IH LC  N   EAK 
Sbjct: 224 RPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKD 283

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  M+ +G +P++++++ ++      G     + L++LMV + + PN   ++ L++ + 
Sbjct: 284 IFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYA 343

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +++A  +F  M++ G   D V++  +I+  C+   +++AL  +  MV  G+ P+  
Sbjct: 344 RCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEA 403

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY-NTFIDGLCKNGYIVEAVELFRT 251
            Y  L  G     ++  A +L  EM   D+      Y ++ I+ L K G + E  ++   
Sbjct: 404 VYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDL 463

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       ++  +N L++G C  G +E A  L  ++    +  +   Y  ++ G C +G+
Sbjct: 464 MVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGR 523

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           +D A  +F DM    V P  +++  ++HG  +  + +   ++ H+M E
Sbjct: 524 IDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIE 571



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 165/349 (47%), Gaps = 3/349 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTY-NSLIHGLCHAN 65
           +IGV   P+   Y  +I G C  G + KAK L  +M  ++I P  V Y +S+I+ L    
Sbjct: 395 DIGV--PPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEG 452

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
              E K +   M+  G +P+VVTFN +M+  C  G M+EA  LLD M    + PN + Y 
Sbjct: 453 RVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 512

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+DG+C  G+I+ A  +F  M   G K   V YNI+++G  + +    A  ++ EM+  
Sbjct: 513 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIES 572

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G   ++ TY  +  GL   +  + A  L E++   +V  D  T+N  I  + K G   EA
Sbjct: 573 GTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEA 632

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            ELF  +        +  YN +I  L K    E A  LF S+ +     D    N ++  
Sbjct: 633 KELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRM 692

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           L    ++ KA +    ++EN +         L   F R  K  + I+LL
Sbjct: 693 LLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGKCREHIKLL 741



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 132/261 (50%), Gaps = 6/261 (2%)

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           P  +TY+ L+D +    +   A  +FG +   G   D  SYN LI+G+ K  EV++A  L
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
           + +M+ + + P VVTYN+L  GL +  ++  + ++ E+M    +  +  TYN+ I G   
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239

Query: 239 NGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
            G   E+V +F+ +   G++ C ++    N  I  LC+  R++ A ++F S+  +    +
Sbjct: 240 AGMWKESVRVFKEMSSSGLIPCVVNC---NSFIHALCRHNRIKEAKDIFDSMVLKGPKPN 296

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           +++Y+ ++HG   +G     + L   M    + PN   F  LI+ + R     K + +  
Sbjct: 297 IISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFE 356

Query: 356 KMKEKKVMPDASIVSMVVDLL 376
            M+ K ++PD    + V+  L
Sbjct: 357 DMQNKGMIPDTVTFATVISSL 377



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 124/241 (51%), Gaps = 6/241 (2%)

Query: 140 AEELFGSMESMGCKHDDV------SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           A ELF  M+   C H         +YNILI+ Y +    E AL+++  ++  G+ P V +
Sbjct: 100 AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCS 159

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G  +  +V+ A +LF +M    V+ D  TYN+ IDGLCK   +V++  +   + 
Sbjct: 160 YNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMV 219

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 + + YN LI G   +G  + ++ +F+ +    L+  VV  N  IH LC   ++ 
Sbjct: 220 DAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIK 279

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A D+F  M      PN+I + TL+HG+      + +  L++ M  K ++P+    ++++
Sbjct: 280 EAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILI 339

Query: 374 D 374
           +
Sbjct: 340 N 340


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 125/378 (33%), Positives = 208/378 (55%), Gaps = 13/378 (3%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +CKPN VT+ T+++GLC+EG V +A AL  +M  + + P+ +TY +++ G+C   D   A
Sbjct: 76  MCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSA 135

Query: 71  KRLFFEMMD-QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
             L  +M +   ++P VV ++ I+D L K+G+  +A  L   M  + + P+  TYS +++
Sbjct: 136 LNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMIN 195

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GFC +GK + A+ L   M       D V+++ LIN   K  ++  A  L +EM+S G+ P
Sbjct: 196 GFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCP 255

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQR-----------DDVAADTSTYNTFIDGLCK 238
            VVT NTL  GL +  +++ AL++F+ MQ+           + V  D  TYN  I GL  
Sbjct: 256 NVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLIN 315

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
            G  +EA EL+  +       D   Y+ +I+GLCK  RL+ A ++F S+  +    ++VT
Sbjct: 316 EGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVT 375

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           +N +I G C  G +D   +LF +M    +  N I ++TLI GF ++   +  +++  +M 
Sbjct: 376 FNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMI 435

Query: 359 EKKVMPDA-SIVSMVVDL 375
              V PD  +I +M+  L
Sbjct: 436 SSGVYPDTITIRNMLTGL 453



 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 122/360 (33%), Positives = 201/360 (55%), Gaps = 16/360 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE---NINPDVVTYNSLIHGLCHANDWNE 69
           +PN +TY TI+DG+CK G  D   AL L  K E   +I PDVV Y+++I GL       +
Sbjct: 113 QPNQITYGTIVDGMCKMG--DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTD 170

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+ LF EM D+G+ P +VT++ +++  C +GK  EA RLL  M+ R + P+  T+S L++
Sbjct: 171 AQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLIN 230

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK---- 185
                G +N A++L   M S G   + V+ N L++G C + ++++AL +++ M       
Sbjct: 231 ALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDI 290

Query: 186 -------GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
                  G++P V TYN L  GL    +   A +L+EEM    +  DT TY++ I+GLCK
Sbjct: 291 DATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCK 350

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
              + EA ++F ++G      +I  +N LI G CK+G ++  LELF  + RR +VA+ +T
Sbjct: 351 QSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAIT 410

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y  +I G    G ++ + D+F +M  + V P+ I    ++ G     +  K + +L +++
Sbjct: 411 YITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470



 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 126/365 (34%), Positives = 198/365 (54%), Gaps = 16/365 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VT+NT++ GLC E  V +A  LF QM      P+VVT+ +L++GLC      EA  L
Sbjct: 48  PTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVAL 103

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ-RDVRPNAFTYSTLMDGFC 132
              M++ G+QP+ +T+  I+D +CK G    A  LL  M +   ++P+   YS ++DG  
Sbjct: 104 LDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLW 163

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+   A+ LF  M+  G   D V+Y+ +ING+C + +  EA  L +EM+ + I P VV
Sbjct: 164 KDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVV 223

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++ L   L +   +  A  L +EM    V  +  T NT +DGLC +G + +A+E+F+ +
Sbjct: 224 TFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM 283

Query: 253 -----------GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
                           E D+Q YN LI GL   G+   A EL+  +P R +V D VTY+ 
Sbjct: 284 QKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSS 343

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           MI+GLC   ++D+A  +F  M   + +PN++ F TLI G+ +       +EL  +M  + 
Sbjct: 344 MINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRG 403

Query: 362 VMPDA 366
           ++ +A
Sbjct: 404 IVANA 408



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 145/283 (51%), Gaps = 5/283 (1%)

Query: 86  VVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFG 145
           + +FN+++   C   K+  A      + +    P   T++TL+ G C+  +++ A +LF 
Sbjct: 15  IYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFH 74

Query: 146 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 205
            M    CK + V++  L+NG C+   V EA++L   MV  G++P  +TY T+  G+ ++ 
Sbjct: 75  QM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 130

Query: 206 QVEHALKLFEEMQR-DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
               AL L  +M+    +  D   Y+  IDGL K+G   +A  LF  +       DI  Y
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
           +C+I+G C SG+   A  L + +  R +  DVVT++ +I+ L  +G ++ A DL  +M  
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           + V PNV+   TL+ G     K    +E+   M++  +  DA+
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDAT 293



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 123/219 (56%), Gaps = 12/219 (5%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-----------NINPDVVTYNSLIH 59
           VC PN VT NT++DGLC  G +  A  +F  M+              + PDV TYN LI 
Sbjct: 253 VC-PNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILIS 311

Query: 60  GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
           GL +   + EA+ L+ EM  +G+ P  VT++ +++ LCK  ++DEA+++ D M  +   P
Sbjct: 312 GLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSP 371

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           N  T++TL+ G+C  G ++   ELF  M   G   + ++Y  LI G+ K   +  +L ++
Sbjct: 372 NIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIF 431

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +EM+S G+ P  +T   +  GL+   +++ AL + EE+Q
Sbjct: 432 QEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 134/256 (52%), Gaps = 5/256 (1%)

Query: 122 FTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 181
           ++++ L+  FC   K+  A   FG +  +G     V++N L++G C    V EAL L+ +
Sbjct: 16  YSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQ 75

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M     KP VVT+ TL  GL    +V  A+ L + M  D +  +  TY T +DG+CK G 
Sbjct: 76  MC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGD 131

Query: 242 IVEAVELFRTLGILK-CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            V A+ L R +  L   + D+  Y+ +IDGL K GR   A  LF  +  + +  D+VTY+
Sbjct: 132 TVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYS 191

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            MI+G C+ G+  +A  L  +M    ++P+V+ F  LI+  V+    +   +LL +M   
Sbjct: 192 CMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISS 251

Query: 361 KVMPDASIVSMVVDLL 376
            V P+    + ++D L
Sbjct: 252 GVCPNVVTCNTLLDGL 267



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 123/223 (55%), Gaps = 5/223 (2%)

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D  S+NILI  +C   ++  ALS + ++   G  PT+VT+NTL  GL    +V  AL LF
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
            +M + +V     T+ T ++GLC+ G +VEAV L   +     + +   Y  ++DG+CK 
Sbjct: 74  HQMCKPNVV----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 275 GRLEIALELFRSLPRRVLV-ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           G    AL L R +     +  DVV Y+ +I GL  DG+   A +LF++M++  + P+++ 
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +  +I+GF    K S+   LL +M  +K+ PD    S +++ L
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINAL 232



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 4/120 (3%)

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L+   DI ++N LI   C   +L  AL  F  L +      +VT+N ++HGLC + ++ +
Sbjct: 9   LQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSE 68

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A DLF  M      PNV+ F TL++G  R  +  + + LL +M E  + P+      +VD
Sbjct: 69  ALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 124


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 124/383 (32%), Positives = 201/383 (52%), Gaps = 23/383 (6%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY T+IDGLCKE  VD+A +LF +MK +N+ PD+VTY SLI GLC  +    A  L
Sbjct: 341 PNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIAL 400

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M +QG+QP V ++ +++D LCK G+++ A      ++ +    N  TY+ +++G C 
Sbjct: 401 CKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCK 460

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG------- 186
                 A +L   ME  GC  D +++  +I    +  E ++A  + REM+++G       
Sbjct: 461 ADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKV 520

Query: 187 ----------------IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
                           IKP VVTY TL  G F +++++HA  +F  M +  V  +   Y 
Sbjct: 521 RLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYT 580

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
             IDGLCK   + EA+ LF  +       +I  Y  LID LCK+  LE A+ L + +   
Sbjct: 581 IMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEH 640

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
            +  DV +Y I++ GLC  G+++ A ++F  +       NV ++  +I+   +     + 
Sbjct: 641 GIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEA 700

Query: 351 IELLHKMKEKKVMPDASIVSMVV 373
           ++L  KM++K  MPDA    +++
Sbjct: 701 LDLQXKMEDKGCMPDAVTFDIII 723



 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/343 (36%), Positives = 192/343 (55%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V+Y T+I+GLCK G       L  +++G ++ PDVV YN++IH LC      +A  L+
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ +G+ P+VVT+N ++   C  G + EA  LL+ M  +++ P+  T++TL+D     
Sbjct: 227 SEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKE 286

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK+  A+ +   M     K D V+YN LI+GY    +V+ A  ++  M   G+ P V TY
Sbjct: 287 GKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTY 346

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            T+  GL +   V+ A+ LFEEM+  ++  D  TY + IDGLCKN ++  A+ L + +  
Sbjct: 347 TTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKE 406

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + D+ +Y  L+D LCK GRLE A E F+ L  +    +V TYN+MI+GLC      +
Sbjct: 407 QGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGE 466

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           A DL   ME     P+ I F T+I      ++  K  ++L +M
Sbjct: 467 AMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREM 509



 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/389 (31%), Positives = 205/389 (52%), Gaps = 23/389 (5%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G   KP+ V YNTII  LCK   +  A  L+ +M  + I+P+VVTYN+L++G C      
Sbjct: 196 GHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLK 255

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  L  EM  + + P V TFN ++D L K GKM  A  +L +M++  ++P+  TY++L+
Sbjct: 256 EAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLI 315

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+    K+  A+ +F SM   G   +  +Y  +I+G CK K V+EA+SL+ EM  K + 
Sbjct: 316 DGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMI 375

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P +VTY +L  GL + H +E A+ L ++M+   +  D  +Y   +D LCK G +  A E 
Sbjct: 376 PDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEF 435

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F+ L +    L++Q YN +I+GLCK+     A++L   +  +  + D +T+  +I  L  
Sbjct: 436 FQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFE 495

Query: 309 DGQMDKAHDLFLD-----------------------MEENAVAPNVIIFVTLIHGFVRIN 345
             + DKA  +  +                       M +  + P+V+ + TL+ G+  +N
Sbjct: 496 KDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVN 555

Query: 346 KPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +      + + M +  V P+    ++++D
Sbjct: 556 ELKHAKYVFYSMAQMGVTPNVQCYTIMID 584



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 118/360 (32%), Positives = 188/360 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +T NT+I GLC  G + KA     Q+  +    + V+Y +LI+GLC   +     RL
Sbjct: 131 PNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARL 190

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++    V+P VV +N I+  LCKN  + +A  L   M+ + + PN  TY+ L+ GFC+
Sbjct: 191 LRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCI 250

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A  L   M+      D  ++N LI+   K  +++ A  +   M+   IKP VVT
Sbjct: 251 MGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVT 310

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L  G F +++V++A  +F  M +  V  +  TY T IDGLCK   + EA+ LF  + 
Sbjct: 311 YNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMK 370

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 DI  Y  LIDGLCK+  LE A+ L + +  + +  DV +Y I++  LC  G+++
Sbjct: 371 YKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 430

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A + F  +       NV  +  +I+G  + +   + ++L  KM+ K  MPDA     ++
Sbjct: 431 NAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTII 490



 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 184/363 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P T  +N I+  L          +LF + +     PD+ T N L++  CH      A  +
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              ++ +G  P+ +T N ++  LC  G++ +A    D +V +  + N  +Y TL++G C 
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG+      L   +E    K D V YN +I+  CKNK + +A  LY EM+ KGI P VVT
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G   +  ++ A  L  EM+  ++  D  T+NT ID L K G +  A  +   + 
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMM 300

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+  YN LIDG     +++ A  +F S+ +  +  +V TY  MI GLC +  +D
Sbjct: 301 KACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVD 360

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  LF +M+   + P+++ + +LI G  + +   + I L  KMKE+ + PD    ++++
Sbjct: 361 EAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILL 420

Query: 374 DLL 376
           D L
Sbjct: 421 DAL 423



 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 181/333 (54%), Gaps = 23/333 (6%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  +Y  ++D LCK G ++ AK  F ++  +  + +V TYN +I+GLC A+ + EA  
Sbjct: 410 QPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMD 469

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD---------------- 116
           L  +M  +G  P  +TF  I+  L +  + D+A ++L  M+ R                 
Sbjct: 470 LKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVL 529

Query: 117 -------VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
                  ++P+  TY TLMDG+ L  ++  A+ +F SM  MG   +   Y I+I+G CK 
Sbjct: 530 AVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKK 589

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
           K V+EA+SL+ EM  K + P +VTY +L   L + H +E A+ L +EM+   +  D  +Y
Sbjct: 590 KTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSY 649

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
              +DGLCK+G +  A E+F+ L +    L++Q Y  +I+ LCK+G  + AL+L   +  
Sbjct: 650 TILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMED 709

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
           +  + D VT++I+I  L    + DKA  +  +M
Sbjct: 710 KGCMPDAVTFDIIIWALFEKDENDKAEKILXEM 742



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 184/368 (50%), Gaps = 23/368 (6%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTYN++IDG      V  AK +F  M    + P+V TY ++I GLC     +EA  
Sbjct: 305 KPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMS 364

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  + + P +VT+  ++D LCKN  ++ A  L   M ++ ++P+ ++Y+ L+D  C
Sbjct: 365 LFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALC 424

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A+E F  +   G   +  +YN++ING CK     EA+ L  +M  KG  P  +
Sbjct: 425 KGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAI 484

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEM-----------------------QRDDVAADTSTY 229
           T+ T+   LFE  + + A K+  EM                        +  +  D  TY
Sbjct: 485 TFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTY 544

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
            T +DG      +  A  +F ++  +    ++Q Y  +IDGLCK   ++ A+ LF  +  
Sbjct: 545 GTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKH 604

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
           + +  ++VTY  +I  LC +  +++A  L  +M+E+ + P+V  +  L+ G  +  +   
Sbjct: 605 KNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEG 664

Query: 350 VIELLHKM 357
             E+  ++
Sbjct: 665 AKEIFQRL 672



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 138/301 (45%)

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+     P    FN I+  L  N        L          P+  T + LM+ FC 
Sbjct: 51  FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              I  A  +  ++   G   + ++ N LI G C   E+++AL  + ++V++G +   V+
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  GL +  + +   +L  +++   V  D   YNT I  LCKN  + +A +L+  + 
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +     ++  YN L+ G C  G L+ A  L   +  + +  DV T+N +I  L  +G+M 
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMK 290

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  +   M +  + P+V+ + +LI G+  +NK      + + M +  V P+    + ++
Sbjct: 291 AAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMI 350

Query: 374 D 374
           D
Sbjct: 351 D 351



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 119/251 (47%), Gaps = 23/251 (9%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN---------------------- 46
           G  C P+ +T+ TII  L ++   DKA+ +  +M                          
Sbjct: 476 GKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKA 535

Query: 47  -INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA 105
            I PDVVTY +L+ G    N+   AK +F+ M   GV P+V  + +++D LCK   +DEA
Sbjct: 536 CIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEA 595

Query: 106 SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILING 165
             L + M  +++ PN  TY++L+D  C    + RA  L   M+  G + D  SY IL++G
Sbjct: 596 MSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDG 655

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
            CK+  +E A  +++ ++ KG    V  Y  +   L +    + AL L  +M+      D
Sbjct: 656 LCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPD 715

Query: 226 TSTYNTFIDGL 236
             T++  I  L
Sbjct: 716 AVTFDIIIWAL 726



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 63/103 (61%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  +Y  ++DGLCK G ++ AK +F ++  +  + +V  Y ++I+ LC A  ++EA  
Sbjct: 643 QPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALD 702

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           L  +M D+G  P  VTF++I+  L +  + D+A ++L  M+ R
Sbjct: 703 LQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIAR 745


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 125/378 (33%), Positives = 208/378 (55%), Gaps = 13/378 (3%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +CKPN VT+ T+++GLC+EG V +A AL  +M  + + P+ +TY +++ G+C   D   A
Sbjct: 76  MCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSA 135

Query: 71  KRLFFEMMD-QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
             L  +M +   ++P VV ++ I+D L K+G+  +A  L   M  + + P+  TYS +++
Sbjct: 136 LNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMIN 195

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GFC +GK + A+ L   M       D V+++ LIN   K  ++  A  L +EM+S G+ P
Sbjct: 196 GFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCP 255

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQR-----------DDVAADTSTYNTFIDGLCK 238
            VVT NTL  GL +  +++ AL++F+ MQ+           + V  D  TYN  I GL  
Sbjct: 256 NVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLIN 315

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
            G  +EA EL+  +       D   Y+ +I+GLCK  RL+ A ++F S+  +    ++VT
Sbjct: 316 EGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVT 375

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           +N +I G C  G +D   +LF +M    +  N I ++TLI GF ++   +  +++  +M 
Sbjct: 376 FNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMI 435

Query: 359 EKKVMPDA-SIVSMVVDL 375
              V PD  +I +M+  L
Sbjct: 436 SSGVYPDTITIRNMLTGL 453



 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 126/365 (34%), Positives = 198/365 (54%), Gaps = 16/365 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VT+NT++ GLC E  V +A  LF QM      P+VVT+ +L++GLC      EA  L
Sbjct: 48  PTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVAL 103

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ-RDVRPNAFTYSTLMDGFC 132
              M++ G+QP+ +T+  I+D +CK G    A  LL  M +   ++P+   YS ++DG  
Sbjct: 104 LDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLW 163

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+   A+ LF  M+  G   D V+Y+ +ING+C + +  EA  L +EM+ + I P VV
Sbjct: 164 KDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVV 223

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++ L   L +   +  A  L +EM    V  +  T NT +DGLC +G + +A+E+F+ +
Sbjct: 224 TFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM 283

Query: 253 -----------GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
                           E D+Q YN LI GL   G+   A EL+  +P R +V D VTY+ 
Sbjct: 284 QKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSS 343

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           MI+GLC   ++D+A  +F  M   + +PN++ F TLI G+ +       +EL  +M  + 
Sbjct: 344 MINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRG 403

Query: 362 VMPDA 366
           ++ +A
Sbjct: 404 IVANA 408



 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/360 (33%), Positives = 201/360 (55%), Gaps = 16/360 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE---NINPDVVTYNSLIHGLCHANDWNE 69
           +PN +TY TI+DG+CK G  D   AL L  K E   +I PDVV Y+++I GL       +
Sbjct: 113 QPNQITYGTIVDGMCKMG--DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTD 170

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+ LF EM D+G+ P +VT++ +++  C +GK  EA RLL  M+ R + P+  T+S L++
Sbjct: 171 AQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLIN 230

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK---- 185
                G +N A++L   M S G   + V+ N L++G C + ++++AL +++ M       
Sbjct: 231 ALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDI 290

Query: 186 -------GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
                  G++P V TYN L  GL    +   A +L+EEM    +  DT TY++ I+GLCK
Sbjct: 291 DATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCK 350

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
              + EA ++F ++G      +I  +N LI G CK+G ++  LELF  + RR +VA+ +T
Sbjct: 351 QSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAIT 410

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y  +I G    G ++ + D+F +M  + V P+ I    ++ G     +  + + +L +++
Sbjct: 411 YITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 145/283 (51%), Gaps = 5/283 (1%)

Query: 86  VVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFG 145
           + +FN+++   C   K+  A      + +    P   T++TL+ G C+  +++ A +LF 
Sbjct: 15  IYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFH 74

Query: 146 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 205
            M    CK + V++  L+NG C+   V EA++L   MV  G++P  +TY T+  G+ ++ 
Sbjct: 75  QM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 130

Query: 206 QVEHALKLFEEMQR-DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
               AL L  +M+    +  D   Y+  IDGL K+G   +A  LF  +       DI  Y
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
           +C+I+G C SG+   A  L + +  R +  DVVT++ +I+ L  +G ++ A DL  +M  
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           + V PNV+   TL+ G     K    +E+   M++  +  DA+
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDAT 293



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 123/219 (56%), Gaps = 12/219 (5%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-----------NINPDVVTYNSLIH 59
           VC PN VT NT++DGLC  G +  A  +F  M+              + PDV TYN LI 
Sbjct: 253 VC-PNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILIS 311

Query: 60  GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
           GL +   + EA+ L+ EM  +G+ P  VT++ +++ LCK  ++DEA+++ D M  +   P
Sbjct: 312 GLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSP 371

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           N  T++TL+ G+C  G ++   ELF  M   G   + ++Y  LI G+ K   +  +L ++
Sbjct: 372 NIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIF 431

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +EM+S G+ P  +T   +  GL+   +++ AL + EE+Q
Sbjct: 432 QEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 134/256 (52%), Gaps = 5/256 (1%)

Query: 122 FTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 181
           ++++ L+  FC   K+  A   FG +  +G     V++N L++G C    V EAL L+ +
Sbjct: 16  YSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQ 75

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M     KP VVT+ TL  GL    +V  A+ L + M  D +  +  TY T +DG+CK G 
Sbjct: 76  MC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGD 131

Query: 242 IVEAVELFRTLGILK-CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            V A+ L R +  L   + D+  Y+ +IDGL K GR   A  LF  +  + +  D+VTY+
Sbjct: 132 TVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYS 191

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            MI+G C+ G+  +A  L  +M    ++P+V+ F  LI+  V+    +   +LL +M   
Sbjct: 192 CMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISS 251

Query: 361 KVMPDASIVSMVVDLL 376
            V P+    + ++D L
Sbjct: 252 GVCPNVVTCNTLLDGL 267



 Score =  130 bits (328), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 123/223 (55%), Gaps = 5/223 (2%)

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D  S+NILI  +C   ++  ALS + ++   G  PT+VT+NTL  GL    +V  AL LF
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
            +M + +V     T+ T ++GLC+ G +VEAV L   +     + +   Y  ++DG+CK 
Sbjct: 74  HQMCKPNVV----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 275 GRLEIALELFRSLPRRVLV-ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           G    AL L R +     +  DVV Y+ +I GL  DG+   A +LF++M++  + P+++ 
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +  +I+GF    K S+   LL +M  +K+ PD    S +++ L
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINAL 232



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 4/120 (3%)

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L+   DI ++N LI   C   +L  AL  F  L +      +VT+N ++HGLC + ++ +
Sbjct: 9   LQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSE 68

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A DLF  M      PNV+ F TL++G  R  +  + + LL +M E  + P+      +VD
Sbjct: 69  ALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 124


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 122/353 (34%), Positives = 195/353 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+I+  C++G +++A  L   M G+ + P V TYN++I+GLC    +  AK +
Sbjct: 130 PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 189

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+  G+ P   T+N+++ E C+N  M +A R+ D M  + V P+  ++S L+     
Sbjct: 190 LDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSK 249

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +++A + F  M++ G   D+V Y ILI G+C+N  + EAL +  EM+ +G    VVT
Sbjct: 250 NGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVT 309

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+  GL +   +  A +LF EM    V  D  T+ T I+G  K+G + +AV LF  + 
Sbjct: 310 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMI 369

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+  YN LIDG CK   +E   EL+  +  R +  + ++Y I+I+G CN G + 
Sbjct: 370 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVS 429

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +A  L+ +M E      +I   T++ G+ R     K  E L  M  K ++PD 
Sbjct: 430 EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDG 482



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 114/346 (32%), Positives = 195/346 (56%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N+++ GL K G+VD A  ++ ++    +  +V T N +I+ LC        K    +M +
Sbjct: 66  NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 125

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
           +GV P VVT+N +++  C+ G ++EA  L+D M  + ++P  FTY+ +++G C TGK  R
Sbjct: 126 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 185

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A+ +   M  +G   D  +YNIL+   C+N  + +A  ++ EM S+G+ P +V+++ L  
Sbjct: 186 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG 245

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
            L +   ++ ALK F +M+   +A D   Y   I G C+NG + EA+++   +    C L
Sbjct: 246 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVL 305

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           D+  YN +++GLCK   L  A ELF  +  R +  D  T+  +I+G   DG M+KA  LF
Sbjct: 306 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF 365

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             M +  + P+V+ + TLI GF + ++  KV EL + M  +++ P+
Sbjct: 366 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 411



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 194/362 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP   TYN II+GLCK G   +AK +  +M    ++PD  TYN L+   C  ++  +A+R
Sbjct: 164 KPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAER 223

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM  QGV P +V+F+ ++  L KNG +D+A +    M    + P+   Y+ L+ GFC
Sbjct: 224 IFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFC 283

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A ++   M   GC  D V+YN ++NG CK K + EA  L+ EM  +G+ P   
Sbjct: 284 RNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 343

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+ TL  G  +   +  A+ LFE M + ++  D  TYNT IDG CK   + +  EL+  +
Sbjct: 344 TFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM 403

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   +  +Y  LI+G C  G +  A  L+  +  +   A ++T N ++ G C  G  
Sbjct: 404 ISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNA 463

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            KA +   +M    + P+ I + TLI+GF++     +   L++KM+   ++PD    +++
Sbjct: 464 VKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVI 523

Query: 373 VD 374
           ++
Sbjct: 524 LN 525



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 190/357 (53%), Gaps = 2/357 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GVV  P+ V+++ +I  L K G +D+A   F  MK   + PD V Y  LI G C     +
Sbjct: 232 GVV--PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMS 289

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA ++  EM++QG    VVT+N I++ LCK   + EA  L   M +R V P+ +T++TL+
Sbjct: 290 EALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 349

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +G+   G +N+A  LF  M     K D V+YN LI+G+CK  E+E+   L+ +M+S+ I 
Sbjct: 350 NGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY 409

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  ++Y  L  G   +  V  A +L++EM      A   T NT + G C+ G  V+A E 
Sbjct: 410 PNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEF 469

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              + +     D   YN LI+G  K   ++ A  L   +    L+ DV+TYN++++G   
Sbjct: 470 LSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSR 529

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            G+M +A  + L M E  V P+   + +LI+G V  N   +   +  +M ++  +PD
Sbjct: 530 QGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 185/363 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N + ++ ++    +   + +    F  +K + +   +   NSL+ GL      + A 
Sbjct: 23  CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 82

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            ++ E++  GVQ +V T N++++ LCKN K++     L  M ++ V P+  TY+TL++ +
Sbjct: 83  EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 142

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A EL  SM   G K    +YN +ING CK  +   A  +  EM+  G+ P  
Sbjct: 143 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 202

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN L +       +  A ++F+EM    V  D  +++  I  L KNG + +A++ FR 
Sbjct: 203 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 262

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D   Y  LI G C++G +  AL++   +  +  V DVVTYN +++GLC +  
Sbjct: 263 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 322

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + +A +LF +M E  V P+   F TLI+G+ +    +K + L   M ++ + PD    + 
Sbjct: 323 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 382

Query: 372 VVD 374
           ++D
Sbjct: 383 LID 385



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 111/225 (49%)

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
           C  + + +++L+  Y + +++ E    +R + SKG+  ++   N+L  GL ++  V+ A 
Sbjct: 23  CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 82

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           ++++E+ R  V  +  T N  I+ LCKN  I         +       D+  YN LI+  
Sbjct: 83  EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 142

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C+ G LE A EL  S+  + L   V TYN +I+GLC  G+  +A  +  +M +  ++P+ 
Sbjct: 143 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 202

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +  L+    R +       +  +M  + V+PD    S ++ LL
Sbjct: 203 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 247



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 75/140 (53%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           +T NTI+ G C+ G   KA      M  + I PD +TYN+LI+G     + + A  L  +
Sbjct: 448 ITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNK 507

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M + G+ P V+T+NVI++   + G+M EA  ++  M++R V P+  TY++L++G      
Sbjct: 508 MENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNN 567

Query: 137 INRAEELFGSMESMGCKHDD 156
           +  A  +   M   G   DD
Sbjct: 568 LKEAFRVHDEMLQRGFVPDD 587


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 121/359 (33%), Positives = 200/359 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y T+IDG CK+G ++KAK LF +M    +  +  TY  LIHGL       +   +
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEM 255

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +M + GV P++ T+N +M++LCK+G+  +A ++ D M +R V  N  TY+TL+ G C 
Sbjct: 256 YEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCR 315

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K N A E+   M+S G   + ++YN LI+G+C  +++ +ALSL R++ S+G+ P++VT
Sbjct: 316 EMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVT 375

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +      A K+ +EM+   +     TY   ID   ++  + +A++L  ++ 
Sbjct: 376 YNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSME 435

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            L    D+  Y+ LI G C  GR+  A  LF+S+  +    + V YN M+ G C +G   
Sbjct: 436 ELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSY 495

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +A  LF +MEE  + PNV  +  +I    +  K  +   L+ KM +  + P  SI++++
Sbjct: 496 RALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLI 554



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 190/359 (52%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++  +I G C+ G ++K+  L ++++    +P+VV Y +LI G C   +  +AK LFFEM
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
              G+  +  T+ V++  L KNG   +   + + M +  V PN  TY+ +M+  C  G+ 
Sbjct: 225 GKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRT 284

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A ++F  M   G   + V+YN LI G C+  +  EA  +  +M S GI P ++TYNTL
Sbjct: 285 KDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTL 344

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G   + ++  AL L  +++   ++    TYN  + G CK G    A ++ + +     
Sbjct: 345 IDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGI 404

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           +     Y  LID   +S  +E A++L  S+    L  DV TY+++IHG C  G+M++A  
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASR 464

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           LF  M E    PN +I+ T++ G+ +     + + L  +M+EK++ P+ +    ++++L
Sbjct: 465 LFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVL 523



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 181/361 (50%), Gaps = 1/361 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K  +  Y  II+   +   +D +   F +M  +   P    +N+L+  +  ++ +N+   
Sbjct: 91  KTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQW-W 149

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            FF      V   V +F +++   C+ G+++++  LL  + +    PN   Y+TL+DG C
Sbjct: 150 CFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+I +A++LF  M   G   ++ +Y +LI+G  KN   ++   +Y +M   G+ P + 
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLH 269

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN +   L +  + + A K+F+EM+   V+ +  TYNT I GLC+     EA E+   +
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQM 329

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++  YN LIDG C   +L  AL L R L  R L   +VTYNI++ G C  G  
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A  +  +MEE  + P+ + +  LI  F R +   K I+L   M+E  + PD    S++
Sbjct: 390 SGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVL 449

Query: 373 V 373
           +
Sbjct: 450 I 450



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 76/150 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY  +ID   +   ++KA  L   M+   + PDV TY+ LIHG C     NEA R
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASR 464

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M+++  +P+ V +N ++   CK G    A RL   M ++++ PN  +Y  +++  C
Sbjct: 465 LFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLC 524

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNIL 162
              K   AE L   M   G    D   N++
Sbjct: 525 KERKSKEAEGLVEKMIDSGIGPSDSILNLI 554



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 36/229 (15%)

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
           ES   K     Y ++IN Y +++ ++ ++  + EMV KG  P    +N L          
Sbjct: 86  ESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLL--------- 136

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
                             +S++N +    C           F     +K  LD+ ++  +
Sbjct: 137 -------------TFVVGSSSFNQW---WC-----------FFNESKIKVVLDVYSFGIV 169

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           I G C++G +E + +L   L       +VV Y  +I G C  G+++KA DLF +M +  +
Sbjct: 170 IKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGL 229

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             N   +  LIHG  +     +  E+  KM+E  V P+    + V++ L
Sbjct: 230 VANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQL 278


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 123/349 (35%), Positives = 197/349 (56%), Gaps = 15/349 (4%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + + N V YNT+I G+CK+  V+ A  L+ +M  + I+P+VVTY++LI G        
Sbjct: 188 GKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLK 247

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  LF +++ + ++P   TFN+++D  CK+ KM E   +  +M+++ + P+  TY++LM
Sbjct: 248 DAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLM 307

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+CL  ++N A+ +F +M   G   D  SYNILING+CK K+V++A++L+ EM  K I 
Sbjct: 308 DGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNII 367

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTYN+L  GL +  ++ +AL+L ++M    V  +  TYN+ ID L K   + +A+ L
Sbjct: 368 PNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIAL 427

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
                    +  +  Y  LIDGLCK    +I                V TYN+MIHG C 
Sbjct: 428 ITKFKDQGIQPSMYTYTILIDGLCKVEGYDIT---------------VNTYNVMIHGFCK 472

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            G  D+A  L   M++++  PN + +   I   +  N+  K  +L  +M
Sbjct: 473 KGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREM 521



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 193/378 (51%), Gaps = 24/378 (6%)

Query: 13  KPNTVTYNTIIDGLCKEGFVD-KAKALFL---QMKGENINPDVVTYNSLIHGLCHANDWN 68
           KPN    N +I   C+ G +  +    FL   ++     + D V+Y +LIHGLC   +  
Sbjct: 118 KPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETR 177

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A  L   +  + VQ + V +N ++  +CK+  +++A  L   MV + + PN  TYS L+
Sbjct: 178 AALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 237

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            GF + GK+  A +LF  +     K D  ++NIL++G+CK+++++E  +++  M+ +GI 
Sbjct: 238 SGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGII 297

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTYN+L  G   + +V  A  +F  M +  V  D  +YN  I+G CK   + +A+ L
Sbjct: 298 PDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNL 357

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +       ++  YN LIDGL KSGR+  AL+L   +  R +  +++TYN +I  L  
Sbjct: 358 FNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFK 417

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTL--------------------IHGFVRINKPS 348
             Q+DKA  L    ++  + P++  +  L                    IHGF +     
Sbjct: 418 THQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFD 477

Query: 349 KVIELLHKMKEKKVMPDA 366
           + + LL KMK+   +P+A
Sbjct: 478 EALSLLSKMKDSSCIPNA 495



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 198/374 (52%), Gaps = 10/374 (2%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           ++ K N ++Y++          VD A +LF ++  +N  P    +N ++  L  +  ++ 
Sbjct: 45  LLTKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHT 104

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNG----KMDEASRLLDLMVQRDVRPNAFTYS 125
              L  +M  +G++P++   N+++   C+ G    ++ +A    D +V      +  +Y 
Sbjct: 105 VLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYG 164

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+ G C  G+   A +L   ++    + + V YN +I G CK+K V +A  LY EMVSK
Sbjct: 165 TLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSK 224

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           GI P VVTY+ L  G F + +++ A+ LF ++  +++  D  T+N  +DG CK+  + E 
Sbjct: 225 GISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEG 284

Query: 246 VELFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
             +F  +   GI+    D+  YN L+DG C    +  A  +F ++ +  +  D+ +YNI+
Sbjct: 285 KTVFAMMMKQGIIP---DVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNIL 341

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I+G C   ++DKA +LF +M    + PNV+ + +LI G  +  + S  ++L+ +M ++ V
Sbjct: 342 INGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGV 401

Query: 363 MPDASIVSMVVDLL 376
            P+    + ++D L
Sbjct: 402 PPNILTYNSIIDAL 415



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 109/201 (54%), Gaps = 20/201 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +YN +I+G CK   VDKA  LF +M  +NI P+VVTYNSLI GL  +   + A +L
Sbjct: 333 PDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQL 392

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG--- 130
             +M D+GV P+++T+N I+D L K  ++D+A  L+     + ++P+ +TY+ L+DG   
Sbjct: 393 VDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCK 452

Query: 131 -----------------FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
                            FC  G  + A  L   M+   C  + V+Y I I     N E +
Sbjct: 453 VEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNEND 512

Query: 174 EALSLYREMVSKGIKPTVVTY 194
           +A  L+REM+++G+     +Y
Sbjct: 513 KAEKLFREMITRGLLNRSASY 533


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 120/349 (34%), Positives = 193/349 (55%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTYNT+I   C+EG +++A  +   M  + + P + TYN++I+GLC    +  AK +  E
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M++ G+ P   T+N ++ E C+     EA  +   M+++ V P+  ++S+LM  F     
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +++A   F  M+  G   D+V Y +L++GYC+N  + EAL +  EM+ +G    V+ YNT
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  GL +   +  A KLF+EM       D  T+ T I G C++G + +A+ LF T+    
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            + DI AYN LIDG CK G +E A EL+  +  R +  + +TY I+I+  C+ G + +A 
Sbjct: 242 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 301

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            L+  M E  + P ++   T+I G+ R    SK  E L +M  K V PD
Sbjct: 302 RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPD 350



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/327 (34%), Positives = 175/327 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TYN II+GLCK+G   +AK + ++M    ++PD  TYN+L+   C  ++++EAK 
Sbjct: 33  KPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKE 92

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM+ QGV P +V+F+ +M    +N  +D+A      M +  + P+   Y+ LM G+C
Sbjct: 93  IFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYC 152

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A ++   M   GC  D ++YN ++NG CK K + +A  L+ EMV +G  P   
Sbjct: 153 RNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFY 212

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+ TL  G  +   +  AL LF  M + ++  D   YNT IDG CK G + +A EL+  +
Sbjct: 213 TFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGM 272

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K   +   Y  LI+  C  G +  A  L+  +  + +   +VT N +I G C  G  
Sbjct: 273 ISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDS 332

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIH 339
            KA +    M    VAP+ I + TLI+
Sbjct: 333 SKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 163/314 (51%)

Query: 51  VVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD 110
           +VTYN+LI   C      EA  +   M D+G++PS+ T+N I++ LCK G+   A  +L 
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
            M+   + P+  TY+TL+   C     + A+E+FG M   G   D VS++ L+  + +N+
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
            +++AL  +R+M   G+ P  V Y  L  G      +  ALK+ +EM       D   YN
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           T ++GLCK   + +A +LF  +       D   +  LI G C+ G +  AL LF ++ +R
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
            +  D+V YN +I G C  G+M+KA +L+  M    + PN I +  LI+ +  +   S+ 
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 351 IELLHKMKEKKVMP 364
             L   M EK + P
Sbjct: 301 FRLWDVMIEKGIKP 314



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 156/280 (55%)

Query: 86  VVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFG 145
           +VT+N ++   C+ G ++EA  +++ M  + ++P+ FTY+ +++G C  G+  RA+ +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 146 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 205
            M ++G   D  +YN L+   C+     EA  ++ EM+ +G+ P +V++++L        
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 206 QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYN 265
            ++ AL  F +M++  +  D   Y   + G C+NG ++EA+++   +    C LD+ AYN
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
            +++GLCK   L  A +LF  +  R  + D  T+  +IHG C DG M KA  LF  M + 
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 326 AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            + P+++ + TLI GF ++ +  K  EL   M  +K+ P+
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPN 280



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 106/186 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  + + YNTI++GLCKE  +  A  LF +M      PD  T+ +LIHG C   +  +A 
Sbjct: 172 CVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKAL 231

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M  + ++P +V +N ++D  CK G+M++AS L D M+ R + PN  TY  L++ +
Sbjct: 232 SLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAY 291

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G ++ A  L+  M   G K   V+ N +I GYC++ +  +A      M++KG+ P  
Sbjct: 292 CSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDH 351

Query: 192 VTYNTL 197
           ++YNTL
Sbjct: 352 ISYNTL 357


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 121/363 (33%), Positives = 206/363 (56%), Gaps = 4/363 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V + T++ GLC  G V +A   F  M  ++  PDV+TY +L+H LC A  ++EA+ + 
Sbjct: 91  NAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGML 149

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC-L 133
            EM+ QG  P  VTF+ ++D LCK G  ++A R+L+ ++QR +  +   + T++   C  
Sbjct: 150 REMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNK 209

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +  A ++ G + + G     + +N++ING+CK K+++ A  L   M+ KG  P V T
Sbjct: 210 YNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFT 269

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  GL + ++V  A +L E+M     + +  TY+T I+GLCK G + +A ELF+ + 
Sbjct: 270 FTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLME 329

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  ++  +N LIDGLCK+ R+E A +L+  +       D++TYN +I GLC   Q+D
Sbjct: 330 RRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVD 389

Query: 314 KAHDLFLDMEENAV-APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD-ASIVSM 371
           +A  LF  + E+ V A N + + TL HG+  + + +    +   + +K   PD A+  S+
Sbjct: 390 EAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSL 449

Query: 372 VVD 374
           +++
Sbjct: 450 ILE 452



 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 203/364 (55%), Gaps = 2/364 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY  ++  LCK G  D+A+ +  +M  +   PD VT+++LI GLC      +A 
Sbjct: 122 CAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAF 181

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELC-KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           R+  +++ +G+  S   F  I+  LC K   ++ AS++L +++ +   P    ++ +++G
Sbjct: 182 RVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVING 241

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC    ++ A +L   M   GC  +  ++ ILI G CK   V EA  L  +MV  G  P 
Sbjct: 242 FCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPN 301

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY+T+  GL +  QV+ A +LF+ M+R +   +  T+N  IDGLCK   I EA +L+ 
Sbjct: 302 VVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYH 361

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR-VLVADVVTYNIMIHGLCND 309
            +    C  DI  YN LIDGLCKS +++ A +LF+++P   V  A+ VTY+ + HG    
Sbjct: 362 RMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAAL 421

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G+M  A  +F  + +   +P++  + +LI  + + ++  +V+EL+ +M  K   P  + +
Sbjct: 422 GRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTL 481

Query: 370 SMVV 373
           S V+
Sbjct: 482 SAVL 485



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 200/405 (49%), Gaps = 40/405 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEG------------------------------FVDKAKALFLQ 41
           C P+TVT++T+IDGLCK G                                +K  ++ L 
Sbjct: 157 CAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELA 216

Query: 42  MK------GENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDE 95
            K       +   P V+ +N +I+G C A D + A +L   M+++G  P+V TF +++  
Sbjct: 217 SKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITG 276

Query: 96  LCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHD 155
           LCK  ++ EA +LL+ MV     PN  TYST+++G C  G+++ A ELF  ME   C  +
Sbjct: 277 LCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPN 336

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
            V++NILI+G CK K +EEA  LY  M   G  P ++TYN+L  GL +  QV+ A +LF+
Sbjct: 337 VVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQ 396

Query: 216 EMQRDDV-AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
            +    V AA+  TY+T   G    G + +A  +F  L       D+  Y  LI   CK+
Sbjct: 397 TIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKT 456

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            R    +EL   +  +     V T + ++ GL      ++A  LF  M       + +I+
Sbjct: 457 SRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIY 516

Query: 335 VTLIHGFVRINKPSKVIELLHKM---KEKKVMPDASIVSMVVDLL 376
             ++ G  R +K  K + +L ++   +++K  P +S V  +V+ L
Sbjct: 517 NLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESL 561



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 185/364 (50%), Gaps = 16/364 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY+T+I+GLCK+G VD A  LF  M+  N  P+VVT+N LI GLC A    EA+
Sbjct: 298 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 357

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR-PNAFTYSTLMDG 130
           +L+  M + G  P ++T+N ++D LCK+ ++DEA +L   + +  V   NA TYSTL  G
Sbjct: 358 QLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHG 417

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G++  A  +F  +   G   D  +Y  LI  YCK     E + L  EM SKG  P 
Sbjct: 418 YAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPR 477

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V T + +  GLFE +  E A++LF+ M       D   YN  ++G+ +      A +  +
Sbjct: 478 VNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMAR------ASKHDK 531

Query: 251 TLGILKCELDIQ---------AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
            L +L+  +D +         A + L++ LC+ G+ + A +L   +  R   A V +YN 
Sbjct: 532 ALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNR 591

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           ++ GL    + D+A  +F  M     AP +     +I       K     EL+ +M +  
Sbjct: 592 LLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLG 651

Query: 362 VMPD 365
             PD
Sbjct: 652 CCPD 655



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 183/351 (52%), Gaps = 4/351 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  + +N +I+G CK   +D A  L   M  +   P+V T+  LI GLC AN   EA++L
Sbjct: 230 PTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQL 289

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+  G  P+VVT++ +++ LCK G++D+A  L  LM +R+  PN  T++ L+DG C 
Sbjct: 290 LEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCK 349

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT-VV 192
             +I  A +L+  M   GC  D ++YN LI+G CK+ +V+EA  L++ +   G+     V
Sbjct: 350 AKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAV 409

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+TLF G   + ++  A ++F  +     + D +TY + I   CK    VE VEL   +
Sbjct: 410 TYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEM 469

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   +   + ++ GL +    E A++LF S+  R    D + YN+++ G+    + 
Sbjct: 470 ASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKH 529

Query: 313 DKAHDLF---LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           DKA  +    +D  +    P+      L+    ++ K     +LLHKM E+
Sbjct: 530 DKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSER 580



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 177/384 (46%), Gaps = 37/384 (9%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  + N  +D LC+     +A ALF         P+  TY  LI G   A D + A +L 
Sbjct: 21  NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM   G + + V    +M  LC  G++ EA      M  +D  P+  TY+ L+   C  
Sbjct: 81  EEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTALVHALCKA 139

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE------------- 181
           GK + A+ +   M + GC  D V+++ LI+G CK    E+A  +  +             
Sbjct: 140 GKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAF 199

Query: 182 -----------------------MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
                                  +++KG  PTV+ +N +  G  +   ++ A KL E M 
Sbjct: 200 ETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMI 259

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                 +  T+   I GLCK   + EA +L   + +  C  ++  Y+ +I+GLCK G+++
Sbjct: 260 EKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVD 319

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A ELF+ + RR    +VVT+NI+I GLC   ++++A  L+  M E   AP++I + +LI
Sbjct: 320 DAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLI 379

Query: 339 HGFVRINKPSKVIELLHKMKEKKV 362
            G  +  +  +  +L   + E  V
Sbjct: 380 DGLCKSFQVDEAFQLFQTIPESGV 403



 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 184/369 (49%), Gaps = 4/369 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T+  +I GLCK   V +A+ L  +M     +P+VVTY+++I+GLC     ++A 
Sbjct: 263 CVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAY 322

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M  +   P+VVT N+++D LCK  +++EA +L   M +    P+  TY++L+DG 
Sbjct: 323 ELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGL 382

Query: 132 CLTGKINRAEELFGSMESMGCK-HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           C + +++ A +LF ++   G    + V+Y+ L +GY     + +A  ++  +V KG  P 
Sbjct: 383 CKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPD 442

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           + TY +L L   +  +    ++L EEM         +T +  + GL +  +   A++LF 
Sbjct: 443 LATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFD 502

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL---PRRVLVADVVTYNIMIHGLC 307
           ++    C  D   YN +++G+ ++ + + AL +   +     R         + ++  LC
Sbjct: 503 SMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLC 562

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G+ D A  L   M E   A  V  +  L+ G  R+ +  +  ++   M      P+ S
Sbjct: 563 QVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEIS 622

Query: 368 IVSMVVDLL 376
            V++V+  L
Sbjct: 623 TVNVVISWL 631



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 170/375 (45%), Gaps = 37/375 (9%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           LF       +  +V + N  +  LC  N   EA  LF   M +   P+  T+ +++    
Sbjct: 9   LFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFS 68

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
             G +D A +LL+ M       NA  ++TLM G C  G++  A E F +M +  C  D +
Sbjct: 69  SAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVM 127

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE- 216
           +Y  L++  CK  + +EA  + REMV++G  P  VT++TL  GL +    E A ++ E+ 
Sbjct: 128 TYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 187

Query: 217 ----MQRDDVAADTST-------------------------------YNTFIDGLCKNGY 241
               M   D A +T                                 +N  I+G CK   
Sbjct: 188 IQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKD 247

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           +  A +L   +    C  ++  +  LI GLCK+ R+  A +L   +       +VVTY+ 
Sbjct: 248 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYST 307

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +I+GLC  GQ+D A++LF  ME     PNV+    LI G  +  +  +  +L H+M+E  
Sbjct: 308 VINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG 367

Query: 362 VMPDASIVSMVVDLL 376
             PD    + ++D L
Sbjct: 368 CAPDIITYNSLIDGL 382



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 96/189 (50%), Gaps = 3/189 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM---KGENINPDVVTYNSLIHGLCHANDWN 68
           C  + + YN +++G+ +    DKA A+  Q+   +    NP     ++L+  LC     +
Sbjct: 509 CTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTD 568

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +AK+L  +M ++G   +V ++N ++  L +  + DEA+++ + MV     P   T + ++
Sbjct: 569 DAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVI 628

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
              C   K++ A EL   M  +GC  D  + N LI GYCK+   + A  L  EM   G++
Sbjct: 629 SWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLE 688

Query: 189 PTVVTYNTL 197
           P   T++ L
Sbjct: 689 PNDTTHDLL 697


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/365 (34%), Positives = 198/365 (54%), Gaps = 3/365 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE--- 69
           +P  +++N +I+GLCK G ++KA  +   MK   ++ +V+TYN+LI G C      +   
Sbjct: 160 EPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYK 219

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +  EM   G+ P+ VTFN+++D  CK+  +  A ++   M ++ V+PN  TY++L++
Sbjct: 220 ADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLIN 279

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C  GK+N A  L   M +   K + +++N L+NG+CKNK V++A  L+ +M  +GI P
Sbjct: 280 GLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITP 339

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V TYN L     +   +E A  L+  M    V  D STYN  I GLC+ G +  A  L 
Sbjct: 340 NVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLV 399

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +     + D+  YN LID LC  G ++ AL L   + R+ L    +TYN MI G C +
Sbjct: 400 SEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKE 459

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G +  A +L   ME+     NV  +  LI GF + +K      LL++M EK ++P+    
Sbjct: 460 GNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTY 519

Query: 370 SMVVD 374
            +V +
Sbjct: 520 EIVTE 524



 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/351 (34%), Positives = 197/351 (56%), Gaps = 5/351 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +  + N ++ GL K G +   + ++ +M    I P ++++N +I+GLC     N+A  
Sbjct: 125 KLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGD 184

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKN---GKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           +  +M  +GV  +V+T+N ++D  CK    GKM +A  +L  M    + PN  T++ L+D
Sbjct: 185 IIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILID 244

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GFC    ++ A ++F  M   G K + V+YN LING C N +V EA +L  +MV+  +KP
Sbjct: 245 GFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKP 304

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            ++T+N L  G  +   V+ A +LF++M +  +  + +TYN  ID  CK+  + +A  L+
Sbjct: 305 NIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALY 364

Query: 250 RT-LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           R  LG   C  D+  YNCLI GLC+ G LE A  L   +  + L AD++TYNI+I  LCN
Sbjct: 365 RIMLGKGVCP-DVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCN 423

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
            G+M KA  L  +M    + P+ + + T+I G+ +       + L  +M++
Sbjct: 424 KGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEK 474



 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 120/334 (35%), Positives = 179/334 (53%), Gaps = 38/334 (11%)

Query: 15  NTVTYNTIIDGLCKEGFVDK---AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           N +TYNT+IDG CK G + K   A A+  +M+ + I P+ VT+N LI G C   + + A 
Sbjct: 197 NVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAM 256

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++F EM  QGV+P+VVT+N +++ LC NGK++EA+ L D MV   ++PN  T++ L++GF
Sbjct: 257 KVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGF 316

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    + +A ELF  M   G   +  +YNILI+ YCK++ +E+A +LYR M+ KG+ P V
Sbjct: 317 CKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDV 376

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN L  GL     +E A  L  EM    + AD  TYN  ID LC  G + +A+ L   
Sbjct: 377 STYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDE 436

Query: 252 L----------------------GILKCELDIQA-------------YNCLIDGLCKSGR 276
           +                      G L+  L++++             YN LI G CK  +
Sbjct: 437 MCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDK 496

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
           LE A  L   +  + L+ + +TY I+   +   G
Sbjct: 497 LEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 171/322 (53%), Gaps = 13/322 (4%)

Query: 67  WNEAK----RLFFEMM----DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR 118
           W  AK    RL FE      D G++ SV + N +M  L K G++ +   +   M++R + 
Sbjct: 101 WAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIE 160

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE---EA 175
           P   +++ +++G C  GK+N+A ++   M+  G   + ++YN LI+GYCK  ++    +A
Sbjct: 161 PTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKA 220

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
            ++ +EM + GI P  VT+N L  G  +   V  A+K+F EM R  V  +  TYN+ I+G
Sbjct: 221 DAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLING 280

Query: 236 LCKNGYIVEAVELFRTLGILKC-ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
           LC NG + EA  L R   +  C + +I  +N L++G CK+  ++ A ELF  +P++ +  
Sbjct: 281 LCNNGKVNEATAL-RDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITP 339

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           +V TYNI+I   C D  M+ A  L+  M    V P+V  +  LI G  R         L+
Sbjct: 340 NVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLV 399

Query: 355 HKMKEKKVMPDASIVSMVVDLL 376
            +M  K +  D    ++++D L
Sbjct: 400 SEMDTKHLKADLITYNILIDSL 421



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 131/265 (49%), Gaps = 35/265 (13%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTYN++I+GLC  G V++A AL  QM    + P+++T+N+L++G C      +A  
Sbjct: 268 KPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGE 327

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF +M  QG+ P+V T+N+++D  CK+  M++A  L  +M+ + V P+  TY+ L+ G C
Sbjct: 328 LFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLC 387

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILI----------------------------- 163
             G +  A  L   M++   K D ++YNILI                             
Sbjct: 388 RKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQL 447

Query: 164 ------NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
                 +GYCK   +  AL+L  +M   G    V TYN L  G  +  ++E A  L  EM
Sbjct: 448 TYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEM 507

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYI 242
               +  +  TY    + + + G++
Sbjct: 508 LEKGLIPNRMTYEIVTEEMMEKGFV 532



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 95/198 (47%), Gaps = 5/198 (2%)

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
           R  + +  KP       L    F  +  +   ++   +  D   A++   +  +    KN
Sbjct: 49  RSNIGQSSKPISRVQTPLLS--FINYSTQEQTQILLSVSGDSFCANSIIVDILVWAYAKN 106

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
                  E F+       +L + + N L+ GL K G +     +++ + RR +   ++++
Sbjct: 107 LRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISF 166

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE---LLHK 356
           NI+I+GLC  G+++KA D+  DM+   V+ NVI + TLI G+ ++ K  K+ +   +L +
Sbjct: 167 NIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKE 226

Query: 357 MKEKKVMPDASIVSMVVD 374
           M+   + P+    ++++D
Sbjct: 227 MRADGICPNEVTFNILID 244


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  224 bits (571), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 122/353 (34%), Positives = 195/353 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+I+  C++G +++A  L   M G+ + P V TYN++I+GLC    +  AK +
Sbjct: 391 PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 450

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+  G+ P   T+N+++ E C+N  M +A R+ D M  + V P+  ++S L+     
Sbjct: 451 LDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSK 510

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +++A + F  M++ G   D+V Y ILI G+C+N  + EAL +  EM+ +G    VVT
Sbjct: 511 NGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVT 570

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+  GL +   +  A +LF EM    V  D  T+ T I+G  K+G + +AV LF  + 
Sbjct: 571 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMI 630

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+  YN LIDG CK   +E   EL+  +  R +  + ++Y I+I+G CN G + 
Sbjct: 631 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVS 690

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +A  L+ +M E      +I   T++ G+ R     K  E L  M  K ++PD 
Sbjct: 691 EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDG 743



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 114/346 (32%), Positives = 195/346 (56%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N+++ GL K G+VD A  ++ ++    +  +V T N +I+ LC        K    +M +
Sbjct: 327 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 386

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
           +GV P VVT+N +++  C+ G ++EA  L+D M  + ++P  FTY+ +++G C TGK  R
Sbjct: 387 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 446

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A+ +   M  +G   D  +YNIL+   C+N  + +A  ++ EM S+G+ P +V+++ L  
Sbjct: 447 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG 506

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
            L +   ++ ALK F +M+   +A D   Y   I G C+NG + EA+++   +    C L
Sbjct: 507 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXL 566

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           D+  YN +++GLCK   L  A ELF  +  R +  D  T+  +I+G   DG M+KA  LF
Sbjct: 567 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLF 626

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             M +  + P+V+ + TLI GF + ++  KV EL + M  +++ P+
Sbjct: 627 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 672



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 194/362 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP   TYN II+GLCK G   +AK +  +M    ++PD  TYN L+   C  ++  +A+R
Sbjct: 425 KPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAER 484

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM  QGV P +V+F+ ++  L KNG +D+A +    M    + P+   Y+ L+ GFC
Sbjct: 485 IFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFC 544

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A ++   M   GC  D V+YN ++NG CK K + EA  L+ EM  +G+ P   
Sbjct: 545 RNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 604

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+ TL  G  +   +  A+ LFE M + ++  D  TYNT IDG CK   + +  EL+  +
Sbjct: 605 TFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM 664

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   +  +Y  LI+G C  G +  A  L+  +  +   A ++T N ++ G C  G  
Sbjct: 665 ISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNA 724

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            KA +   +M    + P+ I + TLI+GF++     +   L++KM+   ++PD    +++
Sbjct: 725 VKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVI 784

Query: 373 VD 374
           ++
Sbjct: 785 LN 786



 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 190/357 (53%), Gaps = 2/357 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GVV  P+ V+++ +I  L K G +D+A   F  MK   + PD V Y  LI G C     +
Sbjct: 493 GVV--PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMS 550

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA ++  EM++QG    VVT+N I++ LCK   + EA  L   M +R V P+ +T++TL+
Sbjct: 551 EALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 610

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +G+   G +N+A  LF  M     K D V+YN LI+G+CK  E+E+   L+ +M+S+ I 
Sbjct: 611 NGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY 670

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  ++Y  L  G   +  V  A +L++EM      A   T NT + G C+ G  V+A E 
Sbjct: 671 PNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEF 730

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              + +     D   YN LI+G  K   ++ A  L   +    L+ DV+TYN++++G   
Sbjct: 731 LSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSR 790

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            G+M +A  + L M E  V P+   + +LI+G V  N   +   +  +M ++  +PD
Sbjct: 791 QGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 184/363 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N + ++ ++    +   + +    F  +K + +   +   NSL+ GL      + A 
Sbjct: 284 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 343

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            ++ E++  GVQ +V T N++++ LCKN K++     L  M ++ V P+  TY+TL++ +
Sbjct: 344 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 403

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A EL  SM   G K    +YN +ING CK  +   A  +  EM+  G+ P  
Sbjct: 404 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 463

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN L +       +  A ++F+EM    V  D  +++  I  L KNG + +A++ FR 
Sbjct: 464 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 523

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D   Y  LI G C++G +  AL++   +  +    DVVTYN +++GLC +  
Sbjct: 524 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKM 583

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + +A +LF +M E  V P+   F TLI+G+ +    +K + L   M ++ + PD    + 
Sbjct: 584 LSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 643

Query: 372 VVD 374
           ++D
Sbjct: 644 LID 646



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 111/225 (49%)

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
           C  + + +++L+  Y + +++ E    +R + SKG+  ++   N+L  GL ++  V+ A 
Sbjct: 284 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 343

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           ++++E+ R  V  +  T N  I+ LCKN  I         +       D+  YN LI+  
Sbjct: 344 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 403

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C+ G LE A EL  S+  + L   V TYN +I+GLC  G+  +A  +  +M +  ++P+ 
Sbjct: 404 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 463

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +  L+    R +       +  +M  + V+PD    S ++ LL
Sbjct: 464 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 508



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 75/140 (53%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           +T NTI+ G C+ G   KA      M  + I PD +TYN+LI+G     + + A  L  +
Sbjct: 709 ITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNK 768

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M + G+ P V+T+NVI++   + G+M EA  ++  M++R V P+  TY++L++G      
Sbjct: 769 MENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNN 828

Query: 137 INRAEELFGSMESMGCKHDD 156
           +  A  +   M   G   DD
Sbjct: 829 LKEAFRVHDEMLQRGFVPDD 848


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  224 bits (570), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 126/395 (31%), Positives = 204/395 (51%), Gaps = 34/395 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   YNT+I G CK G +++ K+  ++M  + + P+V TY + IHG C A +   A+R 
Sbjct: 510 PDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERS 569

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+D G+ P+ V    ++D  CK+G   +A      M+ + V P+  T+S L+ G   
Sbjct: 570 FIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSK 629

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A  +F  +   G   D  +Y  LI+  CK  +++ A  L+ +M  KGI P +VT
Sbjct: 630 NGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVT 689

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  GL ++ ++  A +LF+ +    +A ++ TY+T I G CK+  + EA +LF  + 
Sbjct: 690 YNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMK 749

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELF-------------------------RSLP 288
           ++    D   Y  LIDG CK+G  E AL LF                         + + 
Sbjct: 750 LVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIE 809

Query: 289 RRVLVADV---------VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
              LV D+         VTY I+I   C  G + +A  LF++M++  V PNV+ + +L+H
Sbjct: 810 AYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLH 869

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           G+ RI + S++  L  +M  + + PD    S++VD
Sbjct: 870 GYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVD 904



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 193/362 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TYN +I+G  K   ++KA  L +++K EN+  +     ++++GLCH  D   A  
Sbjct: 404 KPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANE 463

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM+  G++P++V +  I+  L K G+ +EA ++L +M  + + P+ F Y+T++ GFC
Sbjct: 464 LFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFC 523

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+   +     M + G K +  +Y   I+GYC+  E++ A   + EM+  GI P  V
Sbjct: 524 KAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDV 583

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
               L  G  +      A   F  M    V  D  T++  I GL KNG + EA+ +F  L
Sbjct: 584 ICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSEL 643

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D+  Y  LI  LCK G L+ A EL   + ++ +  ++VTYN +I+GLC  G++
Sbjct: 644 LDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEI 703

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            KA +LF  + E  +A N + + T+I G+ +    ++  +L H MK   V PD+ +   +
Sbjct: 704 AKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCAL 763

Query: 373 VD 374
           +D
Sbjct: 764 ID 765



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 183/358 (51%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N      I++GLC  G + +A  LF +M    + P++V Y +++ GL     + EA ++ 
Sbjct: 441 NAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKIL 500

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M DQG+ P V  +N ++   CK GKM+E    L  M+ + ++PN +TY   + G+C  
Sbjct: 501 GVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRA 560

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G++  AE  F  M   G   +DV    LI+GYCK+    +A + +R M+ +G+ P V T+
Sbjct: 561 GEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTH 620

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + L  GL +  +++ A+ +F E+    +  D  TY + I  LCK G +  A EL   +  
Sbjct: 621 SVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCK 680

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                +I  YN LI+GLCK G +  A ELF  +P + L  + VTY+ +I G C    + +
Sbjct: 681 KGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTE 740

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           A  LF  M+   V P+  ++  LI G  +     K + L   M E+ +    +  +++
Sbjct: 741 AFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALI 798



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 190/362 (52%), Gaps = 1/362 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V Y TI+ GL KEG  ++A  +   MK + ++PDV  YN++I G C A    E K 
Sbjct: 474 KPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKS 533

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              EM+ +G++P+V T+   +   C+ G+M  A R    M+   + PN    + L+DG+C
Sbjct: 534 YLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYC 593

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G   +A   F  M   G   D  ++++LI+G  KN +++EA+ ++ E++ KG+ P V 
Sbjct: 594 KDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVF 653

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY +L   L +   ++ A +L ++M +  +  +  TYN  I+GLCK G I +A ELF  +
Sbjct: 654 TYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGI 713

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +   Y+ +I G CKS  L  A +LF  +    +  D   Y  +I G C  G  
Sbjct: 714 PEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNT 773

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +KA  LFL M E  +A +   F  LI GF ++ K  +  +L+  M +  + P+    +++
Sbjct: 774 EKALSLFLGMVEEGIA-STPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTIL 832

Query: 373 VD 374
           ++
Sbjct: 833 IE 834



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 178/362 (49%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY+ +I GLC+ G VD+A  L   M  + + PD   Y +LI G C      E K
Sbjct: 263 CIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGK 322

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  EM   G++P  V +  +++   K   +  A ++ + M  R ++ N FTY  L+ G 
Sbjct: 323 SMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGL 382

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + +AE+LF  M  MG K D  +YN LI GY K + +E+A  L  E+  + +    
Sbjct: 383 CKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANA 442

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
                +  GL     +  A +LF+EM    +  +   Y T + GL K G   EA+++   
Sbjct: 443 YMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGV 502

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D+  YN +I G CK+G++E        +  + L  +V TY   IHG C  G+
Sbjct: 503 MKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGE 562

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           M  A   F++M ++ +APN +I   LI G+ +    +K       M ++ V+PD    S+
Sbjct: 563 MQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSV 622

Query: 372 VV 373
           ++
Sbjct: 623 LI 624



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 191/369 (51%), Gaps = 1/369 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G +G +  P+  TY  +I+  C+ G V++ K +   M+ +   P++VTY+ +I GLC A 
Sbjct: 223 GMLGAIV-PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAG 281

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
           D +EA  L   M ++G+ P    +  ++D  C+  +  E   +LD M    ++P+   Y+
Sbjct: 282 DVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYT 341

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L++GF     I  A ++   M +   K +  +Y  LI+G CK  ++E+A  L+ EM   
Sbjct: 342 ALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMM 401

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           GIKP + TYN L  G +++  +E A +L  E++++++ A+       ++GLC  G +  A
Sbjct: 402 GIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRA 461

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            ELF+ +     + +I  Y  ++ GL K GR E A+++   +  + L  DV  YN +I G
Sbjct: 462 NELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIG 521

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            C  G+M++     ++M    + PNV  +   IHG+ R  +         +M +  + P+
Sbjct: 522 FCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPN 581

Query: 366 ASIVSMVVD 374
             I + ++D
Sbjct: 582 DVICTDLID 590



 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 187/363 (51%), Gaps = 1/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V    +IDG CK+G   KA A F  M  + + PDV T++ LIHGL       EA  +
Sbjct: 580 PNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGV 639

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E++D+G+ P V T+  ++  LCK G +  A  L D M ++ + PN  TY+ L++G C 
Sbjct: 640 FSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCK 699

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+I +A ELF  +   G   + V+Y+ +I GYCK+  + EA  L+  M   G+ P    
Sbjct: 700 LGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFV 759

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G  +    E AL LF  M  + +A+ T  +N  IDG  K G ++EA +L   + 
Sbjct: 760 YCALIDGCCKAGNTEKALSLFLGMVEEGIAS-TPAFNALIDGFFKLGKLIEAYQLVEDMV 818

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +   Y  LI+  C  G ++ A +LF  + +R ++ +V+TY  ++HG    G+  
Sbjct: 819 DNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRS 878

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +   LF +M    + P+ + +  ++   ++     K ++L+  M  + V    ++ ++++
Sbjct: 879 EMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILI 938

Query: 374 DLL 376
           D L
Sbjct: 939 DAL 941



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 182/347 (52%), Gaps = 1/347 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T++ +I GL K G + +A  +F ++  + + PDV TY SLI  LC   D   A  L
Sbjct: 615 PDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFEL 674

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M  +G+ P++VT+N +++ LCK G++ +A  L D + ++ +  N+ TYST++ G+C 
Sbjct: 675 HDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCK 734

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +  +  A +LF  M+ +G   D   Y  LI+G CK    E+ALSL+  MV +GI  T   
Sbjct: 735 SANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPA- 793

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L  G F++ ++  A +L E+M  + +  +  TY   I+  C  G I EA +LF  + 
Sbjct: 794 FNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQ 853

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 ++  Y  L+ G  + GR      LF  +  R +  D + +++M+     +G   
Sbjct: 854 KRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWI 913

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           KA  L  DM    V     ++  LI    + N  S+V+++L +++++
Sbjct: 914 KALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQ 960



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 179/401 (44%), Gaps = 49/401 (12%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P+  TY ++I  LCKEG +  A  L   M  + INP++VTYN+LI+GLC   +  +A+ L
Sbjct: 650  PDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAREL 709

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            F  + ++G+  + VT++ I+   CK+  + EA +L   M    V P++F Y  L+DG C 
Sbjct: 710  FDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCK 769

Query: 134  TGKINRAEELFGSM-------------------------------ESMGCKH---DDVSY 159
             G   +A  LF  M                               E M   H   + V+Y
Sbjct: 770  AGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTY 829

Query: 160  NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
             ILI  +C    ++EA  L+ EM  + + P V+TY +L  G   I +      LF+EM  
Sbjct: 830  TILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVA 889

Query: 220  DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCKSGR 276
              +  D   ++  +D   K G  ++A++L   +   G+  C+     Y  LID LCK   
Sbjct: 890  RGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCK---NLYTILIDALCKHNN 946

Query: 277  LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
            L   L++   + ++     + T   ++      G+ D+A  +   M        V  F+ 
Sbjct: 947  LSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM--------VRSFLN 998

Query: 337  LIHGFVR-INKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            L+   VR  N+     E+L  + E +      I ++ VDL 
Sbjct: 999  LLEFSVRNGNRGKSNGEMLSIILEGRKSLSGDIQTLDVDLF 1039



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 150/304 (49%), Gaps = 5/304 (1%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P++  Y  +IDG CK G  +KA +LFL M  E I      +N+LI G        EA +L
Sbjct: 755  PDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQL 813

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              +M+D  + P+ VT+ ++++  C  G + EA +L   M +R+V PN  TY++L+ G+  
Sbjct: 814  VEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNR 873

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             G+ +    LF  M + G K DD++++++++ + K     +AL L  +M+S+G+      
Sbjct: 874  IGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNL 933

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            Y  L   L + + +   LK+ +E+++       +T  T +    + G   EA+ +  ++ 
Sbjct: 934  YTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM- 992

Query: 254  ILKCELDIQAYNCLIDGLCKSG--RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
             ++  L++  ++       KS    L I LE  +SL   +   DV  +  +     N G+
Sbjct: 993  -VRSFLNLLEFSVRNGNRGKSNGEMLSIILEGRKSLSGDIQTLDVDLFKELSSSTSNQGK 1051

Query: 312  MDKA 315
               A
Sbjct: 1052 NASA 1055



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 164/391 (41%), Gaps = 69/391 (17%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRL--FFEMMDQGV--QPSVVTFNVIMDELCKNGKM 102
           +NPDVV        +   N   + KRL  FF  ++       ++ TF+++   LC +G  
Sbjct: 70  LNPDVVFL------VIKQNQVIDPKRLHGFFNWVNSRTVFSQNLSTFSILSLILCNSGLF 123

Query: 103 DEASRLLDLMVQRDVR-PNA----------------------FTYSTLMDGFCLTGKINR 139
             A+ +L+ M+  D R P+                         +  L+D +   G +N 
Sbjct: 124 GNAANVLERMI--DTRNPHVKILDSIIKCYKEINGSSSSSSVVVFEILIDIYRKKGFLNE 181

Query: 140 AEELFGSMES---------------------------------MGCKHDDV-SYNILING 165
           A  +F   ++                                 +G    DV +Y  LIN 
Sbjct: 182 AVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGMLGAIVPDVYTYTNLINA 241

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
           YC+  +VEE   +  +M  KG  P +VTY+ +  GL     V+ AL+L   M    +  D
Sbjct: 242 YCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPD 301

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
              Y T IDG C+     E   +   +  +  + D  AY  LI+G  K   +  A ++  
Sbjct: 302 NYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKE 361

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            +  R +  +  TY  +IHGLC  G ++KA DLF +M    + P++  +  LI G+ ++ 
Sbjct: 362 EMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQ 421

Query: 346 KPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              K  ELL ++K++ +  +A +   +V+ L
Sbjct: 422 NMEKAYELLIEIKKENLTANAYMCGAIVNGL 452



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ + ++ ++D   KEG   KA  L   M  E +N     Y  LI  LC  N+ +E  +
Sbjct: 893 KPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLK 952

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
           +  E+  QG + S+ T   ++    + G+ DEA R+L+ MV+
Sbjct: 953 VLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVR 994


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  224 bits (570), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 122/353 (34%), Positives = 195/353 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+I+  C++G +++A  L   M G+ + P V TYN++I+GLC    +  AK +
Sbjct: 287 PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 346

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+  G+ P   T+N+++ E C+N  M +A R+ D M  + V P+  ++S L+     
Sbjct: 347 LDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSK 406

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +++A + F  M++ G   D+V Y ILI G+C+N  + EAL +  EM+ +G    VVT
Sbjct: 407 NGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVT 466

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+  GL +   +  A +LF EM    V  D  T+ T I+G  K+G + +AV LF  + 
Sbjct: 467 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMI 526

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+  YN LIDG CK   +E   EL+  +  R +  + ++Y I+I+G CN G + 
Sbjct: 527 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVS 586

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +A  L+ +M E      +I   T++ G+ R     K  E L  M  K ++PD 
Sbjct: 587 EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDG 639



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 114/346 (32%), Positives = 195/346 (56%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N+++ GL K G+VD A  ++ ++    +  +V T N +I+ LC        K    +M +
Sbjct: 223 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 282

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
           +GV P VVT+N +++  C+ G ++EA  L+D M  + ++P  FTY+ +++G C TGK  R
Sbjct: 283 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 342

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A+ +   M  +G   D  +YNIL+   C+N  + +A  ++ EM S+G+ P +V+++ L  
Sbjct: 343 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG 402

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
            L +   ++ ALK F +M+   +A D   Y   I G C+NG + EA+++   +    C L
Sbjct: 403 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVL 462

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           D+  YN +++GLCK   L  A ELF  +  R +  D  T+  +I+G   DG M+KA  LF
Sbjct: 463 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF 522

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             M +  + P+V+ + TLI GF + ++  KV EL + M  +++ P+
Sbjct: 523 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 568



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 194/362 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP   TYN II+GLCK G   +AK +  +M    ++PD  TYN L+   C  ++  +A+R
Sbjct: 321 KPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAER 380

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM  QGV P +V+F+ ++  L KNG +D+A +    M    + P+   Y+ L+ GFC
Sbjct: 381 IFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFC 440

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A ++   M   GC  D V+YN ++NG CK K + EA  L+ EM  +G+ P   
Sbjct: 441 RNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 500

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+ TL  G  +   +  A+ LFE M + ++  D  TYNT IDG CK   + +  EL+  +
Sbjct: 501 TFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM 560

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   +  +Y  LI+G C  G +  A  L+  +  +   A ++T N ++ G C  G  
Sbjct: 561 ISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNA 620

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            KA +   +M    + P+ I + TLI+GF++     +   L++KM+   ++PD    +++
Sbjct: 621 VKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVI 680

Query: 373 VD 374
           ++
Sbjct: 681 LN 682



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 190/357 (53%), Gaps = 2/357 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GVV  P+ V+++ +I  L K G +D+A   F  MK   + PD V Y  LI G C     +
Sbjct: 389 GVV--PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMS 446

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA ++  EM++QG    VVT+N I++ LCK   + EA  L   M +R V P+ +T++TL+
Sbjct: 447 EALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 506

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +G+   G +N+A  LF  M     K D V+YN LI+G+CK  E+E+   L+ +M+S+ I 
Sbjct: 507 NGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY 566

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  ++Y  L  G   +  V  A +L++EM      A   T NT + G C+ G  V+A E 
Sbjct: 567 PNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEF 626

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              + +     D   YN LI+G  K   ++ A  L   +    L+ DV+TYN++++G   
Sbjct: 627 LSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSR 686

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            G+M +A  + L M E  V P+   + +LI+G V  N   +   +  +M ++  +PD
Sbjct: 687 QGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 185/363 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N + ++ ++    +   + +    F  +K + +   +   NSL+ GL      + A 
Sbjct: 180 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 239

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            ++ E++  GVQ +V T N++++ LCKN K++     L  M ++ V P+  TY+TL++ +
Sbjct: 240 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 299

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A EL  SM   G K    +YN +ING CK  +   A  +  EM+  G+ P  
Sbjct: 300 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 359

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN L +       +  A ++F+EM    V  D  +++  I  L KNG + +A++ FR 
Sbjct: 360 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 419

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D   Y  LI G C++G +  AL++   +  +  V DVVTYN +++GLC +  
Sbjct: 420 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 479

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + +A +LF +M E  V P+   F TLI+G+ +    +K + L   M ++ + PD    + 
Sbjct: 480 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 539

Query: 372 VVD 374
           ++D
Sbjct: 540 LID 542



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 111/225 (49%)

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
           C  + + +++L+  Y + +++ E    +R + SKG+  ++   N+L  GL ++  V+ A 
Sbjct: 180 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 239

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           ++++E+ R  V  +  T N  I+ LCKN  I         +       D+  YN LI+  
Sbjct: 240 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 299

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C+ G LE A EL  S+  + L   V TYN +I+GLC  G+  +A  +  +M +  ++P+ 
Sbjct: 300 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 359

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +  L+    R +       +  +M  + V+PD    S ++ LL
Sbjct: 360 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 404



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 75/140 (53%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           +T NTI+ G C+ G   KA      M  + I PD +TYN+LI+G     + + A  L  +
Sbjct: 605 ITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNK 664

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M + G+ P V+T+NVI++   + G+M EA  ++  M++R V P+  TY++L++G      
Sbjct: 665 MENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNN 724

Query: 137 INRAEELFGSMESMGCKHDD 156
           +  A  +   M   G   DD
Sbjct: 725 LKEAFRVHDEMLQRGFVPDD 744


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  224 bits (570), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 198/368 (53%), Gaps = 13/368 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYNT++DG CK   V KA  L+ +M G+ + P+VVT+  LI GLC  ++   A++ 
Sbjct: 261 PNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKF 320

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   GV P++  +N ++D  CK G + EA  L   + + ++ P+ FTYS L+ G C 
Sbjct: 321 LIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCG 380

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++  A+ L   M+  G   + V+YN LI+GYCK   +E+A+ +  +M  KGI+P ++T
Sbjct: 381 VDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIIT 440

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           ++TL  G  +  ++E A+ L+ EM    +  D   Y   IDG  K+G   EA  L + + 
Sbjct: 441 FSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQ 500

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRS-------------LPRRVLVADVVTYN 300
                 ++   +CLIDGLCK GR+  A++LF +             L R +   + V Y 
Sbjct: 501 EAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYT 560

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +I GLC DG++ KA   F DM  + + P+V   + +I G  R      V+ L   + + 
Sbjct: 561 ALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKM 620

Query: 361 KVMPDASI 368
            ++P++S+
Sbjct: 621 GIIPNSSV 628



 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 187/341 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY T+IDG C++G   KA  LF +M  + I P VV Y  LI GLC  +  +EA+ +
Sbjct: 191 PNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESM 250

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M + G+ P++ T+N +MD  CK   + +A  L   M+   + PN  T+  L+DG C 
Sbjct: 251 FRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCK 310

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           T ++  A +    M S G   +   YN LI+GYCK   + EALSL+ E+    I P V T
Sbjct: 311 TDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFT 370

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  GL  + ++E A  L +EM++     +  TYNT IDG CK G + +A+E+   + 
Sbjct: 371 YSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMT 430

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E +I  ++ LIDG CK+G++E A+ L+  +  + L+ DVV Y  +I G   DG   
Sbjct: 431 EKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTK 490

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           +A  L  +M+E  + PNV     LI G  +  + S  I+L 
Sbjct: 491 EAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 190/363 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P     N ++DGL K+G  D    ++  M     +P+VVTY +LI G C   D+ +A RL
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+++ + P+VV + +++  LC   ++ EA  +   M    + PN +TY+T+MDG+C 
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              + +A EL+  M   G   + V++ ILI+G CK  E+  A     +M S G+ P +  
Sbjct: 276 IAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +   +  AL L  E+++ ++  D  TY+  I GLC    + EA  L + + 
Sbjct: 336 YNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMK 395

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +   YN LIDG CK G +E A+E+   +  + +  +++T++ +I G C  G+M+
Sbjct: 396 KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKME 455

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L+ +M    + P+V+ +  LI G  +     +   L  +M+E  + P+   +S ++
Sbjct: 456 AAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515

Query: 374 DLL 376
           D L
Sbjct: 516 DGL 518



 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 194/361 (53%), Gaps = 5/361 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   +  +I    + G V++A  ++ +M   ++ P +   N ++ GL     ++   ++
Sbjct: 126 PNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKV 180

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +M+ +G  P+VVT+  ++D  C+ G   +A RL D M+++ + P    Y+ L+ G C 
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG 240

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +I+ AE +F +M + G   +  +YN +++GYCK   V++AL LY+EM+  G+ P VVT
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVT 300

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  GL +  ++  A K   +M    V  +   YN  IDG CK G + EA+ L   + 
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +   D+  Y+ LI GLC   R+E A  L + + ++  + + VTYN +I G C +G M+
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA ++   M E  + PN+I F TLI G+ +  K    + L  +M  K ++PD    + ++
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480

Query: 374 D 374
           D
Sbjct: 481 D 481



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 128/247 (51%), Gaps = 13/247 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTYNT+IDG CKEG ++KA  +  QM  + I P+++T+++LI G C A     A  L
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + EM+ +G+ P VV +  ++D   K+G   EA RL   M +  + PN FT S L+DG C 
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520

Query: 134 TGKINRAEELF---------GS----MESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
            G+I+ A +LF         GS    ++   C  + V Y  LI G C +  + +A   + 
Sbjct: 521 DGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFS 580

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           +M   G++P V T   +  G F    +   + L  ++ +  +  ++S Y     G  ++G
Sbjct: 581 DMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESG 640

Query: 241 YIVEAVE 247
           Y+  A+ 
Sbjct: 641 YLKSALR 647



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 13/219 (5%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +T++T+IDG CK G ++ A  L+ +M  + + PDVV Y +LI G     +  EA R
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV-------------RP 119
           L  EM + G+ P+V T + ++D LCK+G++ +A +L       D               P
Sbjct: 495 LHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSP 554

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           N   Y+ L+ G C  G+I +A + F  M   G + D  +  ++I G+ +   + + + L 
Sbjct: 555 NHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQ 614

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
            +++  GI P    Y  L  G  E   ++ AL+  E++ 
Sbjct: 615 ADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLS 653



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 46/97 (47%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +C PN V Y  +I GLC +G + KA   F  M+   + PDV T   +I G   A    + 
Sbjct: 551 LCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDV 610

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR 107
             L  +++  G+ P+   + V+     ++G +  A R
Sbjct: 611 MMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALR 647


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  224 bits (570), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 123/350 (35%), Positives = 194/350 (55%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTYNT+I+  C+EG + +A  +   M G+ + P + TYN++I+GLC    +  AK +F E
Sbjct: 221 VTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNE 280

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+  G+ P   T+N ++ E C+N    EA  +   M+ R V P+  ++S+L+      G 
Sbjct: 281 MLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGH 340

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +++A   F  M++ G   D+V Y ILINGYC+N  + EAL +  +M+ +G    VV YNT
Sbjct: 341 LDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNT 400

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  GL +   +  A  LF+EM    V  D  T+ T I G CK G + +A+ LF  +    
Sbjct: 401 ILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKN 460

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            + DI  YN LIDG CK+  +E A EL+  +  R +  + ++Y I+++G CN G + +A 
Sbjct: 461 IKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAF 520

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            L+ +M    + P ++   T+I G+ R    SK  E L KM  + V PD+
Sbjct: 521 RLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDS 570



 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 201/370 (54%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N   G   KP   TYN +I+GLCK+G   +AK +F +M    ++PD  TYN+L+   C  
Sbjct: 244 NSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRN 303

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
           N++ EAK +F +M+ +GV P +++F+ ++    +NG +D+A      M    + P+   Y
Sbjct: 304 NNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIY 363

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + L++G+C  G ++ A E+   M   GC  D V+YN ++NG CK K + +A +L+ EMV 
Sbjct: 364 TILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVE 423

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           +G+ P   T+ TL  G  +   +  AL LF  M + ++  D  TYN  IDG CK   + +
Sbjct: 424 RGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEK 483

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A EL+  +   K   +  +Y  L++G C  G +  A  L+  + R+ +   +VT N +I 
Sbjct: 484 ANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIK 543

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G C  G + KA +    M    V P+ I + TLI+GFV+     K   L++KM+ K + P
Sbjct: 544 GYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQP 603

Query: 365 DASIVSMVVD 374
           D    +++++
Sbjct: 604 DVVTYNVILN 613



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 190/352 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ ++++++I    + G +D+A   F  MK   + PD V Y  LI+G C     +EA  +
Sbjct: 323 PDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEI 382

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M++QG    VV +N I++ LCK   + +A+ L D MV+R V P+  T++TL+ G C 
Sbjct: 383 RDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCK 442

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G + +A  LFG M     K D V+YNILI+G+CK  E+E+A  L+ EM+S+ I P  ++
Sbjct: 443 EGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHIS 502

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G   +  V  A +L++EM R  +     T NT I G C++G + +A E    + 
Sbjct: 503 YAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMI 562

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D   YN LI+G  K   ++ A  L   +  + L  DVVTYN++++G C  G+M 
Sbjct: 563 SEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQ 622

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A  +   M E  + P+   + TLI+G+V  +   +      +M ++  +PD
Sbjct: 623 EAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 154/284 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  + V YNTI++GLCK+  +  A ALF +M    + PD  T+ +LIHG C   +  +A 
Sbjct: 391 CALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKAL 450

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M  + ++P +VT+N+++D  CK  +M++A+ L + M+ R + PN  +Y+ L++G+
Sbjct: 451 SLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGY 510

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G ++ A  L+  M   G K   V+ N +I GYC++ ++ +A     +M+S+G+ P  
Sbjct: 511 CNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDS 570

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYNTL  G  +   ++ A  L  +M+   +  D  TYN  ++G C+ G + EA  + R 
Sbjct: 571 ITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRK 630

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           +     + D   Y  LI+G      L+ A      + +R  V D
Sbjct: 631 MIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 175/355 (49%), Gaps = 35/355 (9%)

Query: 55  NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
           NSL+ GL      + A  ++ E+   G++ +V T N++++ LCK+ K+D+    L  M Q
Sbjct: 154 NSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQ 213

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
           + +  +  TY+TL++ +C  G +  A E+  SM   G K    +YN +ING CK      
Sbjct: 214 KGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVR 273

Query: 175 ALSLYREMVSKGIKPTVVTYNTL---------FLGLFEIH-------------------- 205
           A  ++ EM+S G+ P   TYNTL         FL   +I                     
Sbjct: 274 AKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIG 333

Query: 206 ------QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
                  ++ AL  F +M+   +  D   Y   I+G C+NG + EA+E+   +    C L
Sbjct: 334 VSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCAL 393

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           D+ AYN +++GLCK   L  A  LF  +  R +V D  T+  +IHG C +G M KA  LF
Sbjct: 394 DVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLF 453

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             M +  + P+++ +  LI GF +  +  K  EL ++M  +K+ P+    +++V+
Sbjct: 454 GIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVN 508



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 81/144 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VT NT+I G C+ G + KA     +M  E + PD +TYN+LI+G       ++A  
Sbjct: 532 KPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFF 591

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M  +G+QP VVT+NVI++  C+ G+M EA  +L  M++R + P+  TY+TL++G+ 
Sbjct: 592 LINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYV 651

Query: 133 LTGKINRAEELFGSMESMGCKHDD 156
               +  A      M   G   DD
Sbjct: 652 SQDNLKEAFRFHDEMLQRGFVPDD 675



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 2/226 (0%)

Query: 142 ELFGSMESMG--CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           E+  S+ SM   C  D++ +++LI  Y + +++ E    ++ +  KG   ++   N+L  
Sbjct: 99  EIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLG 158

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           GL ++  V+ A +++ E+ R  +  +  T N  ++ LCK+  I +       +       
Sbjct: 159 GLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFA 218

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           DI  YN LI+  C+ G L  A E+  S+  + L   + TYN +I+GLC  G+  +A  +F
Sbjct: 219 DIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVF 278

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +M    ++P+   + TL+    R N   +  ++   M  + V PD
Sbjct: 279 NEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPD 324


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  224 bits (570), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 122/359 (33%), Positives = 199/359 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y T+IDG CK+G ++KAK LF +M    +  +  TY  LIHGL       +   +
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEM 255

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +M + GV P++ T+N +M++LCK+G+  +A ++ D M +R V  N  TY+TL+ G C 
Sbjct: 256 YEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCR 315

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K N A ++   M+S     + ++YN LI+G+C   ++ +ALSL R++ S+G+ P++VT
Sbjct: 316 EMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVT 375

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G         A K+ +EM+   +     TY   ID   ++  +  A++L  ++ 
Sbjct: 376 YNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSME 435

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            L    D+  Y+ LI G C  G++  A  LF+S+  ++L  + V YN MI G C +G   
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSY 495

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +A  LF DMEE  +APNV  +  LI    +  K  +  +L+ KM +  + P  +I +++
Sbjct: 496 RALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLI 554



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 191/359 (53%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++  +I G C+ G ++K+  L ++++    +P+VV Y +LI G C   +  +AK LFFEM
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
              G+  +  T+ V++  L KNG   +   + + M +  V PN +TY+ +M+  C  G+ 
Sbjct: 225 GKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRT 284

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A ++F  M   G   + V+YN LI G C+  +  EA  +  +M S  I P ++TYNTL
Sbjct: 285 KDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTL 344

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G   + ++  AL L  +++   ++    TYN  + G C+ G    A ++ + +     
Sbjct: 345 IDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGI 404

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           +     Y  LID   +S  +E A++L  S+    LV DV TY+++IHG C  GQM++A  
Sbjct: 405 KPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           LF  M E  + PN +I+ T+I G+ +     + + L   M+EK++ P+ +  S ++ +L
Sbjct: 465 LFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVL 523



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 182/361 (50%), Gaps = 1/361 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K  +  Y  II+   +   +D +   F +M  +   P    +N+L+  +  ++ +N+   
Sbjct: 91  KTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQW-W 149

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            FF      V   V +F +++   C+ G+++++  LL  + +    PN   Y+TL+DG C
Sbjct: 150 CFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+I +A++LF  M   G   ++ +Y +LI+G  KN   ++   +Y +M   G+ P + 
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLY 269

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN +   L +  + + A K+F+EM+   V+ +  TYNT I GLC+     EA ++   +
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++  YN LIDG C  G+L  AL L R L  R L   +VTYN+++ G C  G  
Sbjct: 330 KSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDT 389

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A  +  +MEE  + P+ + +  LI  F R +     I+L   M+E  ++PD    S++
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVL 449

Query: 373 V 373
           +
Sbjct: 450 I 450



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 121/207 (58%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           V  PN +TYNT+IDG C  G + KA +L   +K   ++P +VTYN L+ G C   D + A
Sbjct: 333 VINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGA 392

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            ++  EM ++G++PS VT+ +++D   ++  M+ A +L   M +  + P+  TYS L+ G
Sbjct: 393 AKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHG 452

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC+ G++N A  LF SM     + ++V YN +I GYCK      AL L+R+M  K + P 
Sbjct: 453 FCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPN 512

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEM 217
           V +Y+ L   L +  +++ A  L E+M
Sbjct: 513 VASYSYLIRVLCKERKLKEAEDLVEKM 539



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 172/360 (47%), Gaps = 21/360 (5%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL--------------------F 74
           A++L LQ+    I     T +SL+H L  +       RL                    F
Sbjct: 58  AQSLLLQVISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYF 117

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+D+G  P    FN ++  +  +   ++     +   +  V  + +++  ++ G C  
Sbjct: 118 NEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFN-ESKIKVVLDVYSFGIVIKGCCEA 176

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+I ++ +L   +   G   + V Y  LI+G CK  E+E+A  L+ EM   G+     TY
Sbjct: 177 GEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTY 236

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  GLF+    +   +++E+MQ   V  +  TYN  ++ LCK+G   +A ++F  +  
Sbjct: 237 TVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRE 296

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                +I  YN LI GLC+  +   A ++   +   V+  +++TYN +I G C+ G++ K
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGK 356

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  L  D++   ++P+++ +  L+ GF R    S   +++ +M+E+ + P     ++++D
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 78/150 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY  +ID   +   ++ A  L   M+   + PDV TY+ LIHG C     NEA R
Sbjct: 405 KPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M+++ ++P+ V +N ++   CK G    A RL   M ++++ PN  +YS L+   C
Sbjct: 465 LFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLC 524

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNIL 162
              K+  AE+L   M   G    D   N++
Sbjct: 525 KERKLKEAEDLVEKMIDSGIDPSDTICNLI 554



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 36/229 (15%)

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
           ES   K     Y ++IN Y +++ ++ ++  + EMV KG  P    +N L          
Sbjct: 86  ESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLL--------- 136

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
                             +S++N +    C           F     +K  LD+ ++  +
Sbjct: 137 -------------TFVVGSSSFNQW---WC-----------FFNESKIKVVLDVYSFGIV 169

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           I G C++G +E + +L   L       +VV Y  +I G C  G+++KA DLF +M +  +
Sbjct: 170 IKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGL 229

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             N   +  LIHG  +     +  E+  KM+E  V P+    + V++ L
Sbjct: 230 VANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQL 278


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  223 bits (569), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 206/401 (51%), Gaps = 36/401 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN V+Y  ++  LC +   D+A  L   M+   +  DVVTY +LI GLC A + ++A 
Sbjct: 111 CRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAV 170

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM + G++P+VV ++ ++   CK+G+ ++  ++   M ++ + P+   Y+ L+D  
Sbjct: 171 ELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSL 230

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK  +A  +   M   G + + V+YN+LIN  CK   V+EA+ + ++M  KG+ P V
Sbjct: 231 CKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDV 290

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDD--VAADTSTYNTFIDGLCKNGYIVEAVELF 249
           VTYNTL  GL ++ +++ A+ L EEM R    V  +  T+N+ I GLC  G + +A ++ 
Sbjct: 291 VTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVR 350

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +    C +++  YN LI GL +  ++  A+EL   +    L  D  TY+I+I G C  
Sbjct: 351 AMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKM 410

Query: 310 GQMDKAHDLFLDMEENAVAP----------------------------------NVIIFV 335
            Q+D+A DL   M +  + P                                  +V+ + 
Sbjct: 411 WQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYS 470

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           T+IHG  +        ELL  + ++ + PDA   S+V+++ 
Sbjct: 471 TMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMF 511



 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 135/429 (31%), Positives = 206/429 (48%), Gaps = 71/429 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + + VTY T+I GLC    VDKA  L  +M    I P+VV Y+SL+ G C +  W +  +
Sbjct: 147 RADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGK 206

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM ++G++P VV +  ++D LCK GK  +A  ++D+MV+R + PN  TY+ L++  C
Sbjct: 207 VFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMC 266

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG--IKPT 190
             G +  A  +   M   G   D V+YN LI G     E++EA+ L  EMV     +KP 
Sbjct: 267 KEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPN 326

Query: 191 VVT-----------------------------------YNTLFLGLFEIHQVEHALKLFE 215
           VVT                                   YN L  GL  +H+V  A++L +
Sbjct: 327 VVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMD 386

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT---------------LGILKCE-- 258
           EM    +  D+ TY+  I G CK   +  A +L  T               L +  CE  
Sbjct: 387 EMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQG 446

Query: 259 -----------------LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
                            LD+ AY+ +I G CK+G L+ A EL +S+    L  D VTY+I
Sbjct: 447 MMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSI 506

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +I+     G M+ A+ +   M  +   P+V +F +LI G+    + +KV+EL+ +M  K 
Sbjct: 507 VINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKN 566

Query: 362 VMPDASIVS 370
           +  D+ I+S
Sbjct: 567 IALDSKIIS 575



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 113/344 (32%), Positives = 182/344 (52%), Gaps = 3/344 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTYN +I+ +CKEG V +A  +  +M  + + PDVVTYN+LI GL    + +EA  
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311

Query: 73  LFFEMMDQG--VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           L  EM+     V+P+VVTFN ++  LC  G+M +A ++  +M +     N  TY+ L+ G
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG 371

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
                K+ +A EL   M S+G + D  +Y+ILI G+CK  +V+ A  L   M  +GI+P 
Sbjct: 372 LLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           +  Y  L + + E   +E A  LF EM  ++   D   Y+T I G CK G +  A EL +
Sbjct: 432 LFHYIPLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLK 490

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
           ++       D   Y+ +I+   KSG +E A  + + +     + DV  ++ +I G    G
Sbjct: 491 SIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKG 550

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           +++K  +L  +M    +A +  I  TL    V  N+   +++ L
Sbjct: 551 EINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSL 594



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 172/329 (52%), Gaps = 5/329 (1%)

Query: 50  DVVTYNSLIHGLCHANDWNEAKRLFFEMM---DQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           D V+YN+++  LC     + A  L   M        +P+ V++ V+M  LC +   D+A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
            LL  M    VR +  TY TL+ G C   ++++A EL G M   G + + V Y+ L+ GY
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           CK+   E+   ++ EM  KGI+P VV Y  L   L ++ + + A  + + M R  +  + 
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            TYN  I+ +CK G + EA+ + + +       D+  YN LI GL     ++ A+ L   
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 287 LPR--RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
           + R   ++  +VVT+N +I GLC+ G+M +A  +   MEE     N++ +  LI G +R+
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +K  K +EL+ +M    + PD+   S+++
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILI 404



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 147/272 (54%), Gaps = 6/272 (2%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSME---SMGCKHDDVS 158
           + EA+ LLD +    VR +A +Y+T++   C  G  +RA  L  +M       C+ + VS
Sbjct: 61  LGEATSLLDAL--PSVR-DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y +L+   C ++  ++A+ L R M S G++  VVTY TL  GL +  +V+ A++L  EM 
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  +   Y++ + G CK+G   +  ++F  +     E D+  Y  LID LCK G+ +
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A  +   + RR L  +VVTYN++I+ +C +G + +A  +   M E  VAP+V+ + TLI
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            G   + +  + + LL +M   K +   ++V+
Sbjct: 298 KGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVT 329



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 136/278 (48%), Gaps = 4/278 (1%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           + KPN VT+N++I GLC  G + +A  +   M+      ++VTYN LI GL   +   +A
Sbjct: 322 IVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKA 381

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             L  EM   G++P   T+++++   CK  ++D A  LL  M  R + P  F Y  L+  
Sbjct: 382 MELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVA 441

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  G + RA  LF  M++     D V+Y+ +I+G CK  +++ A  L + +V +G+ P 
Sbjct: 442 MCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPD 500

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            VTY+ +     +   +E A  + ++M       D + +++ I G    G I + +EL R
Sbjct: 501 AVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIR 560

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
            +      LD +  + L   L  S        L +SLP
Sbjct: 561 EMITKNIALDSKIISTLSTSLVASNE---GKALLQSLP 595



 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 85/155 (54%), Gaps = 3/155 (1%)

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGI---LKCELDIQAYNCLIDGLCKSGRLEIAL 281
           D  +YNT +  LC+ G+   A  L R + +     C  +  +Y  L+  LC     + A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            L RS+    + ADVVTY  +I GLC+  ++DKA +L  +M E+ + PNV+++ +L+ G+
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +  +   V ++  +M EK + PD  + + ++D L
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSL 230


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  223 bits (569), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 124/362 (34%), Positives = 198/362 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY  +ID LC  G +DKAK L+ +M+  +  PD+VTY +L+    +  D    K
Sbjct: 293 CGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVK 352

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R + EM   G  P VVT+ ++++ LCK+GK+D+A  +LD+M  R + PN  TY+TL+ G 
Sbjct: 353 RFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGL 412

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +++ A ELF +MES+G      SY + I+ Y K  + E+AL  + +M  +GI P++
Sbjct: 413 LNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSI 472

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
              N     L E+ ++  A  +F ++    ++ D+ TYN  +    K G I +A +L   
Sbjct: 473 AACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTE 532

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    CE DI   N LID L K+GR++ A ++F  L    L   VVTYNI+I GL  +G+
Sbjct: 533 MLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGK 592

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + KA DLF  M+E+   PN + F  L+    + +     +++  +M      PD    + 
Sbjct: 593 LLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNT 652

Query: 372 VV 373
           ++
Sbjct: 653 II 654



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 174/352 (49%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY+ ++  L +         L  +M+   + P++ TY   I  L  A   ++A  
Sbjct: 224 KPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYG 283

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M D+G  P VVT+ V++D LC  GK+D+A  L   M     +P+  TY TLM  F 
Sbjct: 284 ILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFG 343

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +   +  +  ME+ G   D V+Y IL+   CK+ +V++A  +   M  +GI P + 
Sbjct: 344 NYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLH 403

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GL  + +++ AL+LF  M+   VA    +Y  FID   K G   +A++ F  +
Sbjct: 404 TYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKM 463

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   I A N  +  L + GR+  A ++F  +    L  D VTYN+M+      GQ+
Sbjct: 464 KKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQI 523

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           DKA  L  +M      P++I+  +LI    +  +  +  ++  ++K+ K+ P
Sbjct: 524 DKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAP 575



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 164/324 (50%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P   +YN ++DGL      + A  LF++MK     P++ TYN L+     +   +E   L
Sbjct: 786  PTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFEL 845

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            + EM+ +G +P+++T N+I+  L K+  +++A  L   ++  D  P   TY  L+ G   
Sbjct: 846  YNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLK 905

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             G+   A ++F  M    CK +   YNILING+ K   V  A  L++ M+ +GI+P + +
Sbjct: 906  AGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKS 965

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            Y  L   LF   +V+ A+  FEE++   +  DT +YN  I+GL K+  + EA+ LF  + 
Sbjct: 966  YTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMK 1025

Query: 254  ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  ++  YN LI     +G ++ A ++F  L    L  +V TYN +I G    G  D
Sbjct: 1026 NRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKD 1085

Query: 314  KAHDLFLDMEENAVAPNVIIFVTL 337
            +A  +F  M     +PN   F  L
Sbjct: 1086 RAFSVFKKMMIVGCSPNAGTFAQL 1109



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 182/362 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  +YN +I  L + GF  +A  ++ +M  E + P + TY++L+  L    D      L 
Sbjct: 191 NAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLL 250

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM   G++P++ T+ + +  L + G++D+A  +L  M      P+  TY+ L+D  C  
Sbjct: 251 EEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAA 310

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK+++A+EL+  M +   K D V+Y  L++ +    ++E     + EM + G  P VVTY
Sbjct: 311 GKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTY 370

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L   L +  +V+ A  + + M+   +  +  TYNT I GL     + EA+ELF  +  
Sbjct: 371 TILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMES 430

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L       +Y   ID   K G  E AL+ F  + +R ++  +   N  ++ L   G++ +
Sbjct: 431 LGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIRE 490

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A D+F D+    ++P+ + +  ++  + +  +  K  +LL +M  +   PD  +V+ ++D
Sbjct: 491 AKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLID 550

Query: 375 LL 376
            L
Sbjct: 551 TL 552



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 171/352 (48%), Gaps = 1/352 (0%)

Query: 22   IIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQ 80
            +I  LCK+     AK LF +  K    +P   +YN L+ GL   N    A +LF EM + 
Sbjct: 758  LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817

Query: 81   GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
            G  P++ T+N+++D   K+ ++DE   L + M+ R  +PN  T++ ++     +  IN+A
Sbjct: 818  GCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKA 877

Query: 141  EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
             +L+  + S        +Y  LI G  K    EEA+ ++ EM     KP    YN L  G
Sbjct: 878  LDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILING 937

Query: 201  LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
              +   V  A  LF+ M ++ +  D  +Y   ++ L   G + +AV  F  L +   + D
Sbjct: 938  FGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPD 997

Query: 261  IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
              +YN +I+GL KS RLE AL LF  +  R +  ++ TYN +I    N G +D+A  +F 
Sbjct: 998  TVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFE 1057

Query: 321  DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +++   + PNV  +  LI G  +     +   +  KM      P+A   + +
Sbjct: 1058 ELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 139/247 (56%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            CKPN +T+N II  L K   ++KA  L+ ++   + +P   TY  LI GL  A    EA 
Sbjct: 854  CKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAM 913

Query: 72   RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            ++F EM D   +P+   +N++++   K G ++ A  L   M++  +RP+  +Y+ L++  
Sbjct: 914  KIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECL 973

Query: 132  CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
             +TG+++ A   F  ++  G   D VSYN++ING  K++ +EEALSL+ EM ++GI P +
Sbjct: 974  FMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPEL 1033

Query: 192  VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             TYN L L       V+ A K+FEE+Q   +  +  TYN  I G  K+G    A  +F+ 
Sbjct: 1034 YTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKK 1093

Query: 252  LGILKCE 258
            + I+ C 
Sbjct: 1094 MMIVGCS 1100



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 184/370 (49%), Gaps = 9/370 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNTVT+N ++D LCK   VD A  +F +M   N +PDV+TYN++I+GL        A 
Sbjct: 608 CPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYA- 666

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL-LDLMVQRDVRPNAFTYSTLMDG 130
             F+  M + + P  VT   ++  + K+G++++A ++ ++ + Q  ++ +   +  LM+ 
Sbjct: 667 FWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMEC 726

Query: 131 FCLTGKINRAEELFGSMESMGCK---HDDVSYNILINGYCKNKEVEEALSLYREMV-SKG 186
             +  +I   EE     E + C     DD     LI   CK K+  +A  L+ +   S G
Sbjct: 727 ILIEAEI---EEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLG 783

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
             PT  +YN L  GL   +  E ALKLF EM+      +  TYN  +D   K+  I E  
Sbjct: 784 THPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELF 843

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           EL+  +    C+ +I  +N +I  L KS  +  AL+L+  +          TY  +I GL
Sbjct: 844 ELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGL 903

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              G+ ++A  +F +M +    PN  I+  LI+GF +    +   +L  +M ++ + PD 
Sbjct: 904 LKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDL 963

Query: 367 SIVSMVVDLL 376
              +++V+ L
Sbjct: 964 KSYTILVECL 973



 Score =  147 bits (371), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 176/358 (49%), Gaps = 9/358 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ +  N++ID L K G VD+A  +F ++K   + P VVTYN LI GL       +A 
Sbjct: 538 CEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKAL 597

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M + G  P+ VTFN ++D LCKN  +D A ++   M   +  P+  TY+T++ G 
Sbjct: 598 DLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGL 657

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPT 190
              G+   A   +  M+      D V+   L+ G  K+  VE+A+ +  E V + G++ +
Sbjct: 658 IKEGRAGYAFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTS 716

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF- 249
              +  L   +    ++E A+   E +  + +  D +     I  LCK    ++A +LF 
Sbjct: 717 NQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFD 776

Query: 250 ---RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
              ++LG        ++YNCL+DGL      E AL+LF  +       ++ TYN+++   
Sbjct: 777 KFTKSLGTHPTP---ESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAH 833

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
               ++D+  +L+ +M      PN+I    +I   V+ N  +K ++L +++      P
Sbjct: 834 GKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSP 891



 Score =  134 bits (336), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 167/361 (46%), Gaps = 52/361 (14%)

Query: 58  IHGLCHANDWNEAKRLFFEMMDQGVQPSVV----TFNVIMDELCKNGKMDEASRLLDLMV 113
           I  L   +D N A   +F+M+ Q   P++V    T N +++ L  +G++++ + + DLM 
Sbjct: 93  IGALKSISDPNSALS-YFKMVSQ--LPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQ 149

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILI-----NGYCK 168
           ++ +  N  TY T+     + G I +A    G M   G   +  SYN LI      G+CK
Sbjct: 150 KQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCK 209

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
                EAL +Y+ M+S+G+KP++ TY+ L + L         + L EEM+   +  +  T
Sbjct: 210 -----EALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYT 264

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL- 287
           Y   I  L + G I +A  + +T+    C  D+  Y  LID LC +G+L+ A EL+  + 
Sbjct: 265 YTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMR 324

Query: 288 -----PRRV-----------------------------LVADVVTYNIMIHGLCNDGQMD 313
                P  V                                DVVTY I++  LC  G++D
Sbjct: 325 ASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVD 384

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A D+   M    + PN+  + TLI G + + +  + +EL + M+   V P A    + +
Sbjct: 385 QAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFI 444

Query: 374 D 374
           D
Sbjct: 445 D 445



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 103/186 (55%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            CKPN   YN +I+G  K G V+ A  LF +M  E I PD+ +Y  L+  L      ++A 
Sbjct: 924  CKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAV 983

Query: 72   RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
              F E+   G+ P  V++N++++ L K+ +++EA  L   M  R + P  +TY+ L+  F
Sbjct: 984  HYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHF 1043

Query: 132  CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               G +++A ++F  ++ MG + +  +YN LI G+ K+   + A S++++M+  G  P  
Sbjct: 1044 GNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNA 1103

Query: 192  VTYNTL 197
             T+  L
Sbjct: 1104 GTFAQL 1109


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  223 bits (569), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 198/368 (53%), Gaps = 13/368 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYNT++DG CK   V KA  L+ +M G+ + P+VVT+  LI GLC  ++   A++ 
Sbjct: 261 PNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKF 320

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   GV P++  +N ++D  CK G + EA  L   + + ++ P+ FTYS L+ G C 
Sbjct: 321 LIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCG 380

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++  A+ L   M+  G   + V+YN LI+GYCK   +E+A+ +  +M  KGI+P ++T
Sbjct: 381 VDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIIT 440

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           ++TL  G  +  ++E A+ L+ EM    +  D   Y   IDG  K+G   EA  L + + 
Sbjct: 441 FSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQ 500

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRS-------------LPRRVLVADVVTYN 300
                 ++   +CLIDGLCK GR+  A++LF +             L R +   + V Y 
Sbjct: 501 EAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYT 560

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +I GLC DG++ KA   F DM  + + P+V   + +I G  R      V+ L   + + 
Sbjct: 561 ALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKM 620

Query: 361 KVMPDASI 368
            ++P++S+
Sbjct: 621 GIIPNSSV 628



 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 187/341 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY T+IDG C++G   KA  LF +M  + I P VV Y  LI GLC  +  +EA+ +
Sbjct: 191 PNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESM 250

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M + G+ P++ T+N +MD  CK   + +A  L   M+   + PN  T+  L+DG C 
Sbjct: 251 FRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCK 310

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           T ++  A +    M S G   +   YN LI+GYCK   + EALSL+ E+    I P V T
Sbjct: 311 TDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFT 370

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  GL  + ++E A  L +EM++     +  TYNT IDG CK G + +A+E+   + 
Sbjct: 371 YSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMT 430

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E +I  ++ LIDG CK+G++E A+ L+  +  + L+ DVV Y  +I G   DG   
Sbjct: 431 EKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTK 490

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           +A  L  +M+E  + PNV     LI G  +  + S  I+L 
Sbjct: 491 EAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 190/363 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P     N ++DGL K+G  D    ++  M     +P+VVTY +LI G C   D+ +A RL
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+++ + P+VV + +++  LC   ++ EA  +   M    + PN +TY+T+MDG+C 
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              + +A EL+  M   G   + V++ ILI+G CK  E+  A     +M S G+ P +  
Sbjct: 276 IAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +   +  AL L  E+++ ++  D  TY+  I GLC    + EA  L + + 
Sbjct: 336 YNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMK 395

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +   YN LIDG CK G +E A+E+   +  + +  +++T++ +I G C  G+M+
Sbjct: 396 KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKME 455

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L+ +M    + P+V+ +  LI G  +     +   L  +M+E  + P+   +S ++
Sbjct: 456 AAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515

Query: 374 DLL 376
           D L
Sbjct: 516 DGL 518



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 193/361 (53%), Gaps = 5/361 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   +  +I    + G V++A  ++ +M   ++ P +   N ++ GL     ++   ++
Sbjct: 126 PNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKV 180

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +M+ +G  P+VVT+  ++D  C+ G   +A RL D M+++ + P    Y+ L+ G C 
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG 240

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +I+ AE +F +M + G   +  +YN +++GYCK   V++AL LY EM+  G+ P VVT
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVT 300

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  GL +  ++  A K   +M    V  +   YN  IDG CK G + EA+ L   + 
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +   D+  Y+ LI GLC   R+E A  L + + ++  + + VTYN +I G C +G M+
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA ++   M E  + PN+I F TLI G+ +  K    + L  +M  K ++PD    + ++
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480

Query: 374 D 374
           D
Sbjct: 481 D 481



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 128/248 (51%), Gaps = 13/248 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTYNT+IDG CKEG ++KA  +  QM  + I P+++T+++LI G C A     A  L
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + EM+ +G+ P VV +  ++D   K+G   EA RL   M +  + PN FT S L+DG C 
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520

Query: 134 TGKINRAEELF---------GS----MESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
            G+I+ A +LF         GS    ++   C  + V Y  LI G C +  + +A   + 
Sbjct: 521 DGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFS 580

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           +M   G++P V T   +  G F    +   + L  ++ +  +  ++S Y     G  ++G
Sbjct: 581 DMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESG 640

Query: 241 YIVEAVEL 248
           Y+  A+  
Sbjct: 641 YLKSALSF 648



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 108/217 (49%), Gaps = 13/217 (5%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +T++T+IDG CK G ++ A  L+ +M  + + PDVV Y +LI G     +  EA R
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV-------------RP 119
           L  EM + G+ P+V T + ++D LCK+G++ +A +L       D               P
Sbjct: 495 LHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSP 554

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           N   Y+ L+ G C  G+I +A + F  M   G + D  +  ++I G+ +   + + + L 
Sbjct: 555 NHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQ 614

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            +++  GI P    Y  L  G  E   ++ AL    E
Sbjct: 615 ADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGE 651



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 89/383 (23%), Positives = 143/383 (37%), Gaps = 38/383 (9%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +C PN V Y  +I GLC +G + KA   F  M+   + PDV T   +I G   A    + 
Sbjct: 551 LCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDV 610

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             L  +++  G+ P+   + V+     ++G +  A       VQ   R N+  + +    
Sbjct: 611 MMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSY--- 667

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
                 I    +L    E   C H        I+ +         L  Y   + K   P 
Sbjct: 668 -----TIRSRFQLCVVTEKKEC-HSSYLTAFGIHSF--------VLLWYFHTILKPPSPH 713

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            +     F+G     +   AL+LF +MQ DD   D  T    +      G +     +  
Sbjct: 714 EILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHA 773

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +     + D+   N LI+   K G +  A  LF    ++    DV T+  MI G    G
Sbjct: 774 YIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKK----DVTTWTSMIVGHALHG 829

Query: 311 QMDKAHDLFLDMEE----------------NAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           Q ++A  LF +M+E                + V PN + F+ ++          +  +  
Sbjct: 830 QAEEALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHF 889

Query: 355 HKMKEK-KVMPDASIVSMVVDLL 376
             MKE   + P  S    +VDLL
Sbjct: 890 RSMKEDYSLRPRISHFGCMVDLL 912



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 21/198 (10%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           N+A +LF +M     QP +VT  V +      G +D    +   +  R +  +    ++L
Sbjct: 731 NKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 790

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV---- 183
           ++ +   G+I  A  LF   +    K D  ++  +I G+  + + EEAL L+ EM     
Sbjct: 791 INMYSKCGEIGTARRLFDGTQ----KKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNK 846

Query: 184 ------------SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYN 230
                       S  + P  VT+  + +       VE   + F  M+ D  +    S + 
Sbjct: 847 RARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFG 906

Query: 231 TFIDGLCKNGYIVEAVEL 248
             +D LC+ G + EA E 
Sbjct: 907 CMVDLLCRAGLLTEAYEF 924



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 106/261 (40%), Gaps = 35/261 (13%)

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           + ++A +L   M   D +P+  T +  +      G ++  E +   +   G   D    N
Sbjct: 729 RPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNN 788

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            LIN Y K  E+  A    R +     K  V T+ ++ +G     Q E AL+LF EM+  
Sbjct: 789 SLINMYSKCGEIGTA----RRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKET 844

Query: 221 DVAADTSTYN-------------TFIDGL--CKN-GYIVEAVELFRTLGI-LKCELDIQA 263
           +  A  +  N             TF+  L  C + G + E  + FR++         I  
Sbjct: 845 NKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISH 904

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI-----------HGLCNDGQM 312
           + C++D LC++G L  A E    +P R    + V +  ++           +G  N    
Sbjct: 905 FGCMVDLLCRAGLLTEAYEFILKMPVR---PNAVVWRTLLGACSLQGDSNGNGNSNIKIX 961

Query: 313 DKAHDLFLDMEENAVAPNVII 333
            +A    L++E + V  NVI+
Sbjct: 962 SEARRQLLELEPSHVGDNVIM 982


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 201/362 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY  +ID LC    +D A  LF +MK  +  PD VTY +L+         ++ +
Sbjct: 295 CGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVE 354

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +++ EM   G  P VVTF ++++ LCK G+++EA  LLD M ++ V PN  TY+TL+ G 
Sbjct: 355 KIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGL 414

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +++ A +LF +MES+G +    +Y +LI+ + K+    +AL  + +M ++GI P +
Sbjct: 415 LRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNI 474

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V  N     L E+ ++  A  +F E++   +A D+ TYN  +    K G + EA++L   
Sbjct: 475 VACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSE 534

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  ++CE D+   N LID L K+GR+E A ++F  +    L   VVTYNI++ GL  +GQ
Sbjct: 535 MSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQ 594

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + KA  LF  M  +  +PN I F TL+    + ++    +++ +KM      PD    + 
Sbjct: 595 IQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNT 654

Query: 372 VV 373
           ++
Sbjct: 655 II 656



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 197/379 (51%), Gaps = 14/379 (3%)

Query: 3   NGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC 62
           NG+G     C PNT+T+NT++D LCK   VD A  +F +M   N  PDV+T+N++IHG  
Sbjct: 606 NGHG-----CSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFI 660

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDVRPNA 121
             N    A  LF +M  + ++P  VT   ++  + K+G++++A R+  D   Q     + 
Sbjct: 661 KQNQIKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDR 719

Query: 122 FTYSTLMDGFCLTGKINRAEELFGSMESMGCK---HDDVSYNILINGYCKNKEVEEALSL 178
             +  +M G        +A  LFG  E + C+    DD     +I   CK+K+   A ++
Sbjct: 720 SFWEDVMGGILTEAGTEKAI-LFG--ERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNV 776

Query: 179 YREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           + +   + G+KPT+  YN L  G  E+H VE A  LFEEM+    A DT TYN+ ID   
Sbjct: 777 FVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHG 836

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           K+G I E  +L+  +    C+ +   YN +I  L KS RL+ A++L+ +L          
Sbjct: 837 KSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPC 896

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           T+  +I GL   G++D AH++F  M      PN  I+  L++G+ ++       E   +M
Sbjct: 897 TFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRM 956

Query: 358 KEKKVMPDASIVSMVVDLL 376
            ++ + PD    +++VD+L
Sbjct: 957 VKEGIRPDLKSYTILVDIL 975



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 170/331 (51%), Gaps = 2/331 (0%)

Query: 7    EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            E+GV  KP    YN +IDG  +   V+ A  LF +MK     PD  TYNSLI     +  
Sbjct: 783  ELGV--KPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGK 840

Query: 67   WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             NE   L+ EM+ +G +P+ +T+N+++  L K+ ++D+A  L   +V  D  P   T+  
Sbjct: 841  INELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGP 900

Query: 127  LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
            L+DG   +G+++ A E+F  M   GC+ +   YNIL+NGY K   V+ A   ++ MV +G
Sbjct: 901  LIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEG 960

Query: 187  IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            I+P + +Y  L   L    +V+ AL  FE++++  +  D   YN  I+GL ++    EA+
Sbjct: 961  IRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEAL 1020

Query: 247  ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
             LF  +       D+  YN LI  L   G +E A +++  L    L  +V TYN +I G 
Sbjct: 1021 SLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGY 1080

Query: 307  CNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
               G  + A+ ++  M      PN   F  L
Sbjct: 1081 TLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 174/352 (49%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  T++ ++    K   +     L  +M+   + P++ TY   I  L      +EA R
Sbjct: 226 KPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYR 285

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M D G  P VVT+ V++D LC   K+D+A  L   M     +P+  TY TL+D F 
Sbjct: 286 IMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFS 345

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +++ E+++  ME+ G   D V++ IL+N  CK   + EA  L   M  +G+ P + 
Sbjct: 346 DCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLH 405

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GL   ++++ AL LF  M+   V     TY   ID   K+G+  +A+E F  +
Sbjct: 406 TYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKM 465

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +I A N  +  L + GRL  A  +F  L    L  D VTYN+M+      GQ+
Sbjct: 466 KARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQV 525

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           D+A  L  +M +    P+VI+  +LI    +  +  +  ++  +M+E  + P
Sbjct: 526 DEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAP 577



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 195/391 (49%), Gaps = 38/391 (9%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            C+P+ +T+NTII G  K+  +  A  LF QMK + + PD VT  +L+ G+  +    +A 
Sbjct: 645  CRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK-KLLRPDHVTLCTLLPGVIKSGQIEDAF 703

Query: 72   RL---------------FFE------MMDQGVQPSVV---------------TFNVIMDE 95
            R+               F+E      + + G + +++                   I+  
Sbjct: 704  RITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKV 763

Query: 96   LCKNGKMDEASRL-LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            LCK+ K   A  + +    +  V+P    Y+ L+DGF     +  A  LF  M+S GC  
Sbjct: 764  LCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAP 823

Query: 155  DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
            D  +YN LI+ + K+ ++ E   LY EM+++G KP  +TYN +   L + ++++ A+ L+
Sbjct: 824  DTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLY 883

Query: 215  EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
              +   D +    T+   IDGL K+G + +A E+F  +    C  +   YN L++G  K 
Sbjct: 884  YNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKL 943

Query: 275  GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            G ++ A E F+ + +  +  D+ +Y I++  LC  G++D A   F  +++  + P+++ +
Sbjct: 944  GHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAY 1003

Query: 335  VTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
              +I+G  R  +  + + L H+M+ + ++PD
Sbjct: 1004 NLMINGLGRSQRTEEALSLFHEMQNRGIVPD 1034



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 187/362 (51%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  +YN +I  L + GF  +A  ++ +M  E + P + T+++L+       +      L 
Sbjct: 193 NAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLL 252

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM   G++P++ T+ + +  L ++GK+DEA R++  M      P+  TY+ L+D  C  
Sbjct: 253 EEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTA 312

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            K++ A  LF  M+S   K D V+Y  L++ +     +++   ++ EM + G  P VVT+
Sbjct: 313 RKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTF 372

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L   L +  ++  A  L + M++  V  +  TYNT I GL +   + +A++LF  +  
Sbjct: 373 TILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMES 432

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L  E     Y  LID   KSG    ALE F  +  R +  ++V  N  ++ L   G++ +
Sbjct: 433 LGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGE 492

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  +F +++ + +AP+ + +  ++  + ++ +  + I+LL +M + +  PD  +++ ++D
Sbjct: 493 AKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLID 552

Query: 375 LL 376
            L
Sbjct: 553 TL 554



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 179/363 (49%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           + + N  TY  I   L   G + +A +   +M+      +  +YN LIH L  +    EA
Sbjct: 154 IIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEA 213

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             ++  M+ +G++PS+ TF+ +M    K   +     LL+ M    +RPN +TY+  +  
Sbjct: 214 LEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRV 273

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               GKI+ A  +   M+  GC  D V+Y +LI+  C  +++++A+ L+ +M S   KP 
Sbjct: 274 LGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPD 333

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            VTY TL     +   ++   K++ EM+ D  A D  T+   ++ LCK G I EA +L  
Sbjct: 334 KVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLD 393

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
           T+       ++  YN LI GL ++ RL+ AL+LF ++    +     TY ++I      G
Sbjct: 394 TMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSG 453

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
              KA + F  M+   +APN++     ++    + +  +   + +++K   + PD+   +
Sbjct: 454 HPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYN 513

Query: 371 MVV 373
           M++
Sbjct: 514 MMM 516



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 172/334 (51%), Gaps = 2/334 (0%)

Query: 10   VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWN 68
             +CK ++V    II  LCK      A+ +F++   E  + P +  YN LI G    ++  
Sbjct: 749  AICKDDSVLI-PIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVE 807

Query: 69   EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
             A  LF EM   G  P   T+N ++D   K+GK++E   L D M+ R  +PN  TY+ ++
Sbjct: 808  VAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVI 867

Query: 129  DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
                 + ++++A +L+ ++ S        ++  LI+G  K+  +++A  ++  MV  G +
Sbjct: 868  SNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCR 927

Query: 189  PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
            P    YN L  G  ++  V+ A + F+ M ++ +  D  +Y   +D LC  G + +A+  
Sbjct: 928  PNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHY 987

Query: 249  FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            F  L     + D+ AYN +I+GL +S R E AL LF  +  R +V D+ TYN +I  L  
Sbjct: 988  FEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGI 1047

Query: 309  DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
             G +++A  ++ +++   + PNV  +  LI G+ 
Sbjct: 1048 VGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYT 1081



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 184/402 (45%), Gaps = 38/402 (9%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           V C+P+ +  N++ID L K G V++A  +F +M+  N+ P VVTYN L+ GL       +
Sbjct: 538 VQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQK 597

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A +LF  M   G  P+ +TFN ++D LCKN ++D A ++   M   + RP+  T++T++ 
Sbjct: 598 AVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIH 657

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL----------- 178
           GF    +I  A  LF  M+ +  + D V+   L+ G  K+ ++E+A  +           
Sbjct: 658 GFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSN 716

Query: 179 ----YREMVSKGIKPTVVTYNTLFLG---------------------LFEIHQVEHALKL 213
               + E V  GI     T   +  G                     L +  +   A  +
Sbjct: 717 IDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNV 776

Query: 214 FEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           F +  ++  V      YN  IDG  +   +  A  LF  +    C  D   YN LID   
Sbjct: 777 FVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHG 836

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           KSG++    +L+  +  R    + +TYN++I  L    ++DKA DL+ ++     +P   
Sbjct: 837 KSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPC 896

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            F  LI G ++  +     E+   M      P+++I +++V+
Sbjct: 897 TFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVN 938



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 159/340 (46%), Gaps = 39/340 (11%)

Query: 74  FFEMMDQGVQPSVV----TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
            F     G  P+VV    T N +++ L  + ++++ + + DLM ++ +R N  TY  +  
Sbjct: 108 LFYFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFK 167

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
              + G + +A      M   G   +  SYN LI+   ++   +EAL +YR MVS+G+KP
Sbjct: 168 SLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKP 227

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           ++ T++ L +   +   ++  + L EEM+   +  +  TY   I  L ++G I EA  + 
Sbjct: 228 SLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIM 287

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL------PRRV------------ 291
           + +    C  D+  Y  LID LC + +L+ A+ LF  +      P +V            
Sbjct: 288 KRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDC 347

Query: 292 -----------------LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
                               DVVT+ I+++ LC  G++++A DL   M +  V PN+  +
Sbjct: 348 GHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTY 407

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            TLI G +R N+    ++L   M+   V P A    +++D
Sbjct: 408 NTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLID 447



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 105/193 (54%)

Query: 5    NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
            +G +   C+PN+  YN +++G  K G VD A   F +M  E I PD+ +Y  L+  LC A
Sbjct: 919  DGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIA 978

Query: 65   NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
               ++A   F ++   G+ P +V +N++++ L ++ + +EA  L   M  R + P+ +TY
Sbjct: 979  GRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTY 1038

Query: 125  STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
            ++L+    + G I  A +++  ++ +G K +  +YN LI GY  +   E A  +Y++M+ 
Sbjct: 1039 NSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMV 1098

Query: 185  KGIKPTVVTYNTL 197
             G  P   T+  L
Sbjct: 1099 GGCDPNTGTFAQL 1111


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/363 (33%), Positives = 206/363 (56%), Gaps = 4/363 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V + T++ GLC  G V +A   F  M  ++  PDV+TY +L+H LC A  ++EA+ + 
Sbjct: 43  NAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGML 101

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC-L 133
            EM+ +G  P  VTF+ ++D LCK G  ++A R+L+ ++QR +  +   + T++   C  
Sbjct: 102 REMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNK 161

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +  A ++ G + + G     + +N++ING+CK K+++ A  L   M+ KG  P V T
Sbjct: 162 YNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFT 221

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  GL + ++V  A +L E+M     + +  TY+T I+GLCK G + +A ELF+ + 
Sbjct: 222 FTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLME 281

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  ++  +N LIDGLCK+ R+E A +L+  +       D++TYN +I GLC   Q+D
Sbjct: 282 RRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVD 341

Query: 314 KAHDLFLDMEENAV-APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD-ASIVSM 371
           +A  LF  + E+ V A N + + TL HG+  + + +    +   + +K   PD A+  S+
Sbjct: 342 EAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSL 401

Query: 372 VVD 374
           +++
Sbjct: 402 ILE 404



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 203/364 (55%), Gaps = 2/364 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY  ++  LCK G  D+A+ +  +M      PD VT+++LI GLC      +A 
Sbjct: 74  CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAF 133

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELC-KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           R+  +++ +G+  S   F  I+  LC K   ++ AS++L +++ +   P    ++ +++G
Sbjct: 134 RVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVING 193

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC    ++ A +L   M   GC  +  ++ ILI G CK   V EA  L  +MV+ G  P 
Sbjct: 194 FCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPN 253

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY+T+  GL +  QV+ A +LF+ M+R +   +  T+N  IDGLCK   I EA +L+ 
Sbjct: 254 VVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYH 313

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR-VLVADVVTYNIMIHGLCND 309
            +    C  DI  YN LIDGLCKS +++ A +LF+++P   V  A+ VTY+ + HG    
Sbjct: 314 RMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAAL 373

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G+M  A  +F  + +   +P++  + +LI  + + ++  +V+EL+ +M  K   P  + +
Sbjct: 374 GRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTL 433

Query: 370 SMVV 373
           S V+
Sbjct: 434 SAVL 437



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 201/405 (49%), Gaps = 40/405 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEG------------------------------FVDKAKALFLQ 41
           C P+TVT++T+IDGLCK G                                +K  ++ L 
Sbjct: 109 CAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELA 168

Query: 42  MK------GENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDE 95
            K       +   P V+ +N +I+G C A D + A +L   M+++G  P+V TF +++  
Sbjct: 169 SKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITG 228

Query: 96  LCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHD 155
           LCK  ++ EA +LL+ MV     PN  TYST+++G C  G+++ A ELF  ME   C  +
Sbjct: 229 LCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPN 288

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
            V++NILI+G CK K +EEA  LY  M   G  P ++TYN+L  GL +  QV+ A +LF+
Sbjct: 289 VVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQ 348

Query: 216 EMQRDDV-AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
            +    V AA+  TY+T   G    G + +A  +F  L       D+  Y  LI   CK+
Sbjct: 349 TIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKT 408

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            R    +EL   +  +     V T + ++ GL      ++A  LF  M       + +I+
Sbjct: 409 SRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIY 468

Query: 335 VTLIHGFVRINKPSKVIELLHKM---KEKKVMPDASIVSMVVDLL 376
             ++ G  R +K +K + +L ++   +++K  P +S V  +V+ L
Sbjct: 469 NLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESL 513



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/364 (33%), Positives = 185/364 (50%), Gaps = 16/364 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY+T+I+GLCK+G VD A  LF  M+  N  P+VVT+N LI GLC A    EA+
Sbjct: 250 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 309

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR-PNAFTYSTLMDG 130
           +L+  M + G  P ++T+N ++D LCK+ ++DEA +L   + +  V   NA TYSTL  G
Sbjct: 310 QLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHG 369

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G++  A  +F  +   G   D  +Y  LI  YCK     E + L  EM SKG  P 
Sbjct: 370 YAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPR 429

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V T + +  GLFE +  E A++LF+ M       D   YN  ++G+ +      A +  +
Sbjct: 430 VNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMAR------ASKHNK 483

Query: 251 TLGILKCELDIQ---------AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
            L +L+  +D +         A + L++ LC+ GR + A +L   +  R   A V +YN 
Sbjct: 484 ALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNG 543

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           ++ GL    + D+A  +F  M     AP +     +I       K     EL+ +M +  
Sbjct: 544 LLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLG 603

Query: 362 VMPD 365
             PD
Sbjct: 604 CCPD 607



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 183/351 (52%), Gaps = 4/351 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  + +N +I+G CK   +D A  L   M  +   P+V T+  LI GLC AN   EA++L
Sbjct: 182 PTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQL 241

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+  G  P+VVT++ +++ LCK G++D+A  L  LM +R+  PN  T++ L+DG C 
Sbjct: 242 LEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCK 301

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT-VV 192
             +I  A +L+  M   GC  D ++YN LI+G CK+ +V+EA  L++ +   G+     V
Sbjct: 302 AKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAV 361

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+TLF G   + ++  A ++F  +     + D +TY + I   CK    VE VEL   +
Sbjct: 362 TYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEM 421

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   +   + ++ GL +    E A++LF S+  R    D + YN+++ G+    + 
Sbjct: 422 ASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKH 481

Query: 313 DKAHDLF---LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +KA  +    +D  +    P+      L+    ++ +     +LLHKM E+
Sbjct: 482 NKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSER 532



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 183/369 (49%), Gaps = 4/369 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T+  +I GLCK   V +A+ L  +M     +P+VVTY+++I+GLC     ++A 
Sbjct: 215 CVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAY 274

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M  +   P+VVT N+++D LCK  +++EA +L   M +    P+  TY++L+DG 
Sbjct: 275 ELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGL 334

Query: 132 CLTGKINRAEELFGSMESMGCK-HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           C + +++ A +LF ++   G    + V+Y+ L +GY     + +A  ++  +V KG  P 
Sbjct: 335 CKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPD 394

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           + TY +L L   +  +    ++L EEM         +T +  + GL +  +   A++LF 
Sbjct: 395 LATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFD 454

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL---PRRVLVADVVTYNIMIHGLC 307
           ++    C  D   YN +++G+ ++ +   AL +   +     R         + ++  LC
Sbjct: 455 SMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLC 514

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G+ D A  L   M E   A  V  +  L+ G  R+ +  +  ++   M      P+ S
Sbjct: 515 QVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEIS 574

Query: 368 IVSMVVDLL 376
            V++V+  L
Sbjct: 575 TVNVVISWL 583



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 123/259 (47%), Gaps = 2/259 (0%)

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           PN FTY  L+ GF   G ++ A +L   M+S G + + V +  L+ G C    V EAL  
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
           +R M +K   P V+TY  L   L +  + + A  +  EM     A DT T++T IDGLCK
Sbjct: 67  FRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC-KSGRLEIALELFRSLPRRVLVADVV 297
            G   +A  +   +          A+  +I  LC K   +E+A ++   +  +     V+
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            +N++I+G C    +D A+ L   M E    PNV  F  LI G  + N+  +  +LL KM
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245

Query: 358 KEKKVMPDASIVSMVVDLL 376
                 P+    S V++ L
Sbjct: 246 VTGGCSPNVVTYSTVINGL 264



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 96/189 (50%), Gaps = 3/189 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM---KGENINPDVVTYNSLIHGLCHANDWN 68
           C  + + YN +++G+ +    +KA A+  Q+   +    NP     ++L+  LC     +
Sbjct: 461 CTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTD 520

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +AK+L  +M ++G   +V ++N ++  L +  + DEA+++ + MV     P   T + ++
Sbjct: 521 DAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVI 580

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
              C   K++ A EL   M  +GC  D  + N LI GYCK+   + A  L  EM   G++
Sbjct: 581 SWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLE 640

Query: 189 PTVVTYNTL 197
           P   T++ L
Sbjct: 641 PNDTTHDLL 649


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 119/346 (34%), Positives = 195/346 (56%), Gaps = 5/346 (1%)

Query: 22  IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE-MMDQ 80
           ++ GLC+ G VD+A+A+  ++     NP+ V YN+LI+G   +  + EAK L ++ M+  
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIP----NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIA 366

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           G +P   TFN+++D LCK G +  A   LD MV++   PN  TY+ L+DGFC  G    A
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
            ++  SM + G   + V YN LI   CK+ ++++AL +Y EM SKG KP + T+N+L  G
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
           L +  ++E AL L+ +M  + V A+T TYNT I    +   I +A +L   +    C LD
Sbjct: 487 LCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
              YN LI  LCK+G  E  L L   +    +   + + NI+I+  C  G+++ A     
Sbjct: 547 NITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLR 606

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           DM +  + P+++ + +LI+G  ++ +  + + L + ++ K + PDA
Sbjct: 607 DMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDA 652



 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 122/362 (33%), Positives = 196/362 (54%), Gaps = 1/362 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAK-ALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           PNTV YNT+I+G    G  ++AK  L+  M      PD  T+N +I GLC       A  
Sbjct: 334 PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALE 393

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              EM+ +G +P+V+T+ +++D  CK G  +EAS++++ M  + +  N   Y+ L+   C
Sbjct: 394 FLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALC 453

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GKI  A +++G M S GCK D  ++N LI G CKN ++EEAL LYR+M+ +G+    V
Sbjct: 454 KDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTV 513

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL      +  ++ A KL  EM+      D  TYN  I  LCK G   + + L   +
Sbjct: 514 TYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQM 573

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +    I + N LI+  C++G++  AL+  R + +R L  D+VTYN +I+GLC  G+ 
Sbjct: 574 FGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRF 633

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A +LF  ++   + P+ + + TLI  +      +   +LL K      +P+    S++
Sbjct: 634 QEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSIL 693

Query: 373 VD 374
           ++
Sbjct: 694 IN 695



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/346 (33%), Positives = 180/346 (52%), Gaps = 5/346 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   T+  ++   C    VD A +L   M      P+ + Y  LIH L   N  NEA +L
Sbjct: 198 PTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKL 257

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G +P V TFN ++  LCK G++ EA++L D M+ RD   +A     LM G C 
Sbjct: 258 LEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCR 317

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS-LYREMVSKGIKPTVV 192
            GK++ A  +   + +     + V YN LINGY  +   EEA   LY+ MV  G +P   
Sbjct: 318 MGKVDEARAMLSKIPN----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAF 373

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N +  GL +   +  AL+  +EM +     +  TY   IDG CK G+  EA ++  ++
Sbjct: 374 TFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSM 433

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 L+   YNCLI  LCK G+++ AL+++  +  +    D+ T+N +I+GLC + +M
Sbjct: 434 SAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKM 493

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           ++A  L+ DM    V  N + + TLIH F+R+    +  +L+ +M+
Sbjct: 494 EEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMR 539



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 179/342 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  T+N +IDGLCK+G++  A     +M  +   P+V+TY  LI G C    + EA +
Sbjct: 369 EPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASK 428

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M  +G+  + V +N ++  LCK+GK+ +A ++   M  +  +P+ +T+++L+ G C
Sbjct: 429 VVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLC 488

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K+  A  L+  M   G   + V+YN LI+ + + + +++A  L  EM  +G     +
Sbjct: 489 KNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNI 548

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L   L +    E  L L E+M  +++    ++ N  I+  C+ G + +A++  R +
Sbjct: 549 TYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDM 608

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  DI  YN LI+GLCK GR + AL LF  L  + +  D VTYN +I   C +G  
Sbjct: 609 IQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLF 668

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           + A  L      N   PN I +  LI+ FV+ N  S+   +L
Sbjct: 669 NDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQFTIL 710



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 190/364 (52%), Gaps = 5/364 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN++ Y  +I  L +   V++A  L  +M      PDV T+N +IHGLC A   +EA 
Sbjct: 231 CVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAA 290

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M+ +      +    +M  LC+ GK+DEA      M+ +   PN   Y+TL++G+
Sbjct: 291 KLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARA----MLSKIPNPNTVLYNTLINGY 346

Query: 132 CLTGKINRAEEL-FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            ++G+   A++L + +M   G + D  ++NI+I+G CK   +  AL    EMV KG +P 
Sbjct: 347 VVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPN 406

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V+TY  L  G  +    E A K+   M    ++ +T  YN  I  LCK+G I +A++++ 
Sbjct: 407 VITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYG 466

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C+ DI  +N LI GLCK+ ++E AL L+R +    ++A+ VTYN +IH      
Sbjct: 467 EMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLE 526

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            + +A  L  +M       + I +  LI    +     K + L+ +M  +++ P  +  +
Sbjct: 527 LIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCN 586

Query: 371 MVVD 374
           ++++
Sbjct: 587 ILIN 590



 Score =  165 bits (417), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 164/363 (45%), Gaps = 33/363 (9%)

Query: 28  KEGFVDKAKALFLQMKGEN-INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           K G   +A  L L M G     P   +YN ++  L   N    A  +F++M+ +G+ P+V
Sbjct: 141 KAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTV 200

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
            TF V+M   C   ++D A  LL  M +    PN+  Y  L+       ++N A +L   
Sbjct: 201 YTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEE 260

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLY--------------------------- 179
           M  MGC+ D  ++N +I+G CK   + EA  L+                           
Sbjct: 261 MFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGK 320

Query: 180 ----REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK-LFEEMQRDDVAADTSTYNTFID 234
               R M+SK   P  V YNTL  G     + E A   L++ M       D  T+N  ID
Sbjct: 321 VDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMID 380

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
           GLCK GY+V A+E    +     E ++  Y  LIDG CK G  E A ++  S+  + L  
Sbjct: 381 GLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSL 440

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           + V YN +I  LC DG++  A  ++ +M      P++  F +LI+G  + +K  + + L 
Sbjct: 441 NTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLY 500

Query: 355 HKM 357
             M
Sbjct: 501 RDM 503



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 110/196 (56%), Gaps = 5/196 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+  T+N++I GLCK   +++A  L+  M  E +  + VTYN+LIH         +A 
Sbjct: 473 CKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQAD 532

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  EM  +G     +T+N ++  LCK G  ++   L++ M   ++ P+  + + L++ F
Sbjct: 533 KLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSF 592

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C TGK+N A +    M   G   D V+YN LING CK    +EAL+L+  + +KGI P  
Sbjct: 593 CRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDA 652

Query: 192 VTYNTL-----FLGLF 202
           VTYNTL     + GLF
Sbjct: 653 VTYNTLISRYCYEGLF 668



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 156/380 (41%), Gaps = 68/380 (17%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR-LLDL- 111
           Y  LI  L +  ++    +L  +M D+G       F +IM    K G   +A+R LLD+ 
Sbjct: 97  YYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMW 156

Query: 112 ----------------------------------MVQRDVRPNAFTYSTLMDGFCLTGKI 137
                                             M+ R + P  +T+  +M  FC+  ++
Sbjct: 157 GVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEV 216

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  L   M   GC  + + Y +LI+   +N  V EA+ L  EM   G +P V T+N +
Sbjct: 217 DSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDV 276

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK------------------- 238
             GL +  ++  A KL + M   D  AD       + GLC+                   
Sbjct: 277 IHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNT 336

Query: 239 -------NGYIV-----EAVE-LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
                  NGY+V     EA + L++ + I   E D   +N +IDGLCK G L  ALE   
Sbjct: 337 VLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLD 396

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            + ++    +V+TY I+I G C  G  ++A  +   M    ++ N + +  LI    +  
Sbjct: 397 EMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDG 456

Query: 346 KPSKVIELLHKMKEKKVMPD 365
           K    +++  +M  K   PD
Sbjct: 457 KIQDALQMYGEMSSKGCKPD 476



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 148/305 (48%), Gaps = 14/305 (4%)

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           + +G   S   + +++D+L   G+     +LL  M           +  +M  +   G  
Sbjct: 86  LQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLP 145

Query: 138 NRAEELFGSMESMGC-----KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +A  L   M  + C     K  +V   IL+ G C     + A +++ +M+S+GI PTV 
Sbjct: 146 GQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCP----KVAPNVFYDMLSRGISPTVY 201

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+  +      +++V+ A  L  +M +     ++  Y   I  L +N  + EA++L   +
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            ++ CE D+Q +N +I GLCK+GR+  A +L   +  R   AD +    ++HGLC  G++
Sbjct: 262 FLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKV 321

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK-MKEKKVMPDASIVSM 371
           D+A  +   +      PN +++ TLI+G+V   +  +  +LL+K M      PDA   ++
Sbjct: 322 DEARAMLSKIPN----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNI 377

Query: 372 VVDLL 376
           ++D L
Sbjct: 378 MIDGL 382



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 93/167 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  + +TYN +I  LCK G  +K   L  QM GE I P + + N LI+  C     N+A 
Sbjct: 543 CPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDAL 602

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +   +M+ +G+ P +VT+N +++ LCK G+  EA  L + +  + + P+A TY+TL+  +
Sbjct: 603 QFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRY 662

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           C  G  N A +L     S G   ++++++ILIN + KN    E  ++
Sbjct: 663 CYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQFTI 709


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 119/324 (36%), Positives = 181/324 (55%), Gaps = 3/324 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDK---AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           PN VTYNT++DG CK G   K   A+A   +M    I P+ VT+N+LI G C   +   A
Sbjct: 233 PNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAA 292

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           K+ F EM  QG++P++VT+N +++ LC NGK++EA  L D MV   ++PN  TY+ L++G
Sbjct: 293 KKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALING 352

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC    +  A ++F  +       + +++N +I+ YCK   +EE  SL   M+ +GI P 
Sbjct: 353 FCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPN 412

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V TYN L  GL     ++ A +L  EM+   +  D  TYN  IDGLCKN     A +L  
Sbjct: 413 VSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLN 472

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +  L  + +   YN L+DG C  G+L+ AL +   + +     +VVTYN++I G C   
Sbjct: 473 EMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKIN 532

Query: 311 QMDKAHDLFLDMEENAVAPNVIIF 334
           +++ A+ L  +M E  + PN   +
Sbjct: 533 KLEAANGLLNEMLEKGLNPNRTTY 556



 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 119/360 (33%), Positives = 201/360 (55%), Gaps = 9/360 (2%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N ++  L KE  +   + ++ +M    I+ ++ T+N  I+GLC A   N+A+    +M  
Sbjct: 169 NPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKA 228

Query: 80  QGVQPSVVTFNVIMDELCKNG---KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
            G+ P+VVT+N ++D  CK G   KM +A   +  M+   + PN  T++TL+DGFC    
Sbjct: 229 WGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDEN 288

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +  A++ F  M+  G K + V+YN LING C N ++EEA+ L+ +MV  G+KP +VTYN 
Sbjct: 289 VAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNA 348

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---G 253
           L  G  +   ++ A K+F+++ + ++  +  T+NT ID  CK G + E   L  ++   G
Sbjct: 349 LINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEG 408

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           IL    ++  YNCLI GLC+   L+ A EL   +  + L  DVVTYNI+I GLC + +  
Sbjct: 409 ILP---NVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSR 465

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L  +M    + PN + + TL+ G+    K    + +  +M++++  P+    ++++
Sbjct: 466 NAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLI 525



 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 200/361 (55%), Gaps = 3/361 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH---ANDWNEAK 71
           N  T+N  I+GLC+ G ++KA+     MK   I+P+VVTYN+L+ G C    A    +A+
Sbjct: 199 NLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAE 258

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
               EM+   + P+ VTFN ++D  CK+  +  A +  + M ++ ++PN  TY++L++G 
Sbjct: 259 AFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGL 318

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+  A +L+  M  +G K + V+YN LING+CK K ++EA  ++ ++  + + P V
Sbjct: 319 CNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNV 378

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +T+NT+     +   +E    L   M  + +  + STYN  I GLC+   +  A EL   
Sbjct: 379 ITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNE 438

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D+  YN LIDGLCK+ +   A +L   +    L  + VTYN ++ G C +G+
Sbjct: 439 MENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGK 498

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +  A ++   ME+    PNV+ +  LI G+ +INK      LL++M EK + P+ +   +
Sbjct: 499 LKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDI 558

Query: 372 V 372
           V
Sbjct: 559 V 559



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/289 (35%), Positives = 168/289 (58%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VT+NT+IDG CK+  V  AK  F +M+ + + P++VTYNSLI+GLC+     EA  L
Sbjct: 271 PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDL 330

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +M+  G++P++VT+N +++  CK   M EA+++ D + ++++ PN  T++T++D +C 
Sbjct: 331 WDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCK 390

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +     L  SM   G   +  +YN LI G C+ ++++ A  L  EM +KG+K  VVT
Sbjct: 391 EGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVT 450

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  GL +  +  +A KL  EM    +  +  TYNT +DG C  G +  A+ +   + 
Sbjct: 451 YNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRME 510

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
             + + ++  YN LI G CK  +LE A  L   +  + L  +  TY+I+
Sbjct: 511 KERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 169/310 (54%), Gaps = 3/310 (0%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A   F    D G + S+ + N ++  L K  K+ +   +   M++R +  N  T++  ++
Sbjct: 149 AYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFIN 208

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN---KEVEEALSLYREMVSKG 186
           G C  GK+N+AE+    M++ G   + V+YN L++GYCK     ++ +A +  +EM++  
Sbjct: 209 GLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK 268

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I P  VT+NTL  G  +   V  A K FEEMQ+  +  +  TYN+ I+GLC NG + EA+
Sbjct: 269 ICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAI 328

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +L+  +  L  + +I  YN LI+G CK   ++ A ++F  + ++ LV +V+T+N MI   
Sbjct: 329 DLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAY 388

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C +G M++   L   M +  + PNV  +  LI G  R        ELL++M+ K +  D 
Sbjct: 389 CKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDV 448

Query: 367 SIVSMVVDLL 376
              ++++D L
Sbjct: 449 VTYNILIDGL 458



 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/242 (39%), Positives = 140/242 (57%), Gaps = 7/242 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTYN++I+GLC  G +++A  L+ +M G  + P++VTYN+LI+G C      EA +
Sbjct: 305 KPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATK 364

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F ++  Q + P+V+TFN ++D  CK G M+E   L   M+   + PN  TY+ L+ G C
Sbjct: 365 VFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLC 424

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +  A+EL   ME+ G K D V+YNILI+G CKN +   A  L  EM + G+KP  V
Sbjct: 425 RKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHV 484

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK-------NGYIVEA 245
           TYNTL  G     +++ AL +   M+++    +  TYN  I G CK       NG + E 
Sbjct: 485 TYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEM 544

Query: 246 VE 247
           +E
Sbjct: 545 LE 546



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 82/190 (43%), Positives = 118/190 (62%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +T+NT+ID  CKEG +++  +L   M  E I P+V TYN LI GLC   D   AK L
Sbjct: 376 PNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKEL 435

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM ++G++  VVT+N+++D LCKN K   A +LL+ M    ++PN  TY+TLMDG+C+
Sbjct: 436 LNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCM 495

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A  +   ME    + + V+YN+LI GYCK  ++E A  L  EM+ KG+ P   T
Sbjct: 496 EGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTT 555

Query: 194 YNTLFLGLFE 203
           Y+ + L + E
Sbjct: 556 YDIVRLEMLE 565



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 145/292 (49%), Gaps = 14/292 (4%)

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRP--NAFTYSTLMDGFCLTGKINRAEELFGSMES 149
            +D   KN K   +S    L++    RP   A     L+  +    +++ A E F   + 
Sbjct: 100 FLDSFVKNEKHTVSSVFHSLLLDGG-RPGATALIIDMLVLAYVKNLELHCAYEAFTRAKD 158

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
            G K    S N L++   K  ++ +   +Y+EM+ + I   + T+N    GL    ++  
Sbjct: 159 YGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNK 218

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK-------CELDIQ 262
           A    E+M+   ++ +  TYNT +DG CK G    A ++++    +K       C  ++ 
Sbjct: 219 AEDAIEDMKAWGISPNVVTYNTLVDGYCKRG---SAGKMYKAEAFMKEMLANKICPNEV- 274

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
            +N LIDG CK   +  A + F  + ++ L  ++VTYN +I+GLCN+G++++A DL+  M
Sbjct: 275 TFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKM 334

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
               + PN++ +  LI+GF +     +  ++   + +++++P+    + ++D
Sbjct: 335 VGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMID 386



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 54/88 (61%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTYNT++DG C EG +  A  +  +M+ E   P+VVTYN LI G C  N    A  
Sbjct: 480 KPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANG 539

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNG 100
           L  EM+++G+ P+  T++++  E+ + G
Sbjct: 540 LLNEMLEKGLNPNRTTYDIVRLEMLEKG 567


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/362 (34%), Positives = 183/362 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K ++ TYN +I  L + GFV KA+AL ++M+ E I P VVTYN++IHGL        A+ 
Sbjct: 305 KASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQV 364

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM   G+ P V+T+N +++  CK G + EA  LL  + +  + P   TY+TL+DG+C
Sbjct: 365 KFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYC 424

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  L   M   GC  D  +Y IL+NG  K + +  A   + EM+SKG++P   
Sbjct: 425 RLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCF 484

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YNT       +     A +L E M    +  DT TYN  IDGLCK G + +A  L   +
Sbjct: 485 AYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKM 544

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D   Y CLI   C+ G L  A +L   +    L   VVTY I++H  C  G +
Sbjct: 545 VSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNL 604

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A+  F  M +  + PN I +  LIH      +        H+M E+ + P+    +++
Sbjct: 605 YSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLL 664

Query: 373 VD 374
           +D
Sbjct: 665 ID 666



 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 168/363 (46%), Gaps = 35/363 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTYN II GL K    + A+  F +M+   + PDV+TYNSL++  C A +  EA  L
Sbjct: 341 PTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWL 400

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++   G+ P+V+T+N ++D  C+ G + EA RL + MV++   P+  TY+ LM+G   
Sbjct: 401 LGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRK 460

Query: 134 TGKINRAEELFGSMESMGCKHD-----------------------------------DVS 158
              +  A E F  M S G + D                                    V+
Sbjct: 461 VRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVT 520

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN++I+G CK   +++A  L  +MVS G++P  +TY  L     E   +  A KL   M 
Sbjct: 521 YNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMV 580

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
            D +     TY   +   C+ G +  A   FR +  +  E +   YN LI  LC +GR  
Sbjct: 581 SDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTP 640

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           +A   F  +  R L  +  TY ++I G C +G    A  L+ +M +N + P+      L 
Sbjct: 641 LAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALF 700

Query: 339 HGF 341
            GF
Sbjct: 701 KGF 703



 Score =  148 bits (373), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 182/397 (45%), Gaps = 38/397 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+    N ++  L      D  +A++ +M    + P +VTYN+L+         +EA  L
Sbjct: 200 PDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASML 259

Query: 74  FFEMMDQGVQPSV--VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             EM  QG   S+  VTFNV++  L + G ++ A +L+D M +   + ++FTY+ L+   
Sbjct: 260 LKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM-RLSKKASSFTYNPLITAL 318

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G + +AE L   ME+ G     V+YN +I+G  K ++ E A   + EM + G+ P V
Sbjct: 319 LERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDV 378

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYN+L     +   ++ AL L  +++R  +A    TYNT IDG C+ G + EA  L   
Sbjct: 379 ITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEE 438

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELF-------------------------RS 286
           +    C  D+  Y  L++G  K   L +A E F                          S
Sbjct: 439 MVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSS 498

Query: 287 LP-----RRVLV-----ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
            P     R V++      D VTYN++I GLC  G +  A  L   M  + + P+ I +  
Sbjct: 499 TPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTC 558

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           LIH         +  +LL+ M    + P     +++V
Sbjct: 559 LIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILV 595



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 163/342 (47%), Gaps = 3/342 (0%)

Query: 37  ALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
           A F  +    + PDV   N ++  L  A  W++ + ++ EM+   V+P++VT+N ++D  
Sbjct: 188 AAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSF 247

Query: 97  CKNGKMDEASRLLDLMVQR--DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            K G+ DEAS LL  M  +      N  T++ ++      G +  A +L  SM  +  K 
Sbjct: 248 LKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMR-LSKKA 306

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
              +YN LI    +   V +A +L  EM ++GI PTVVTYN +  GL +  Q E A   F
Sbjct: 307 SSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKF 366

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
            EM+   +  D  TYN+ ++  CK G + EA+ L   L        +  YN LIDG C+ 
Sbjct: 367 AEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRL 426

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G L  A  L   +  +    DV TY I+++G      +  A + F +M    + P+   +
Sbjct: 427 GDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAY 486

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            T I   + ++      +L   M  K + PD    ++++D L
Sbjct: 487 NTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGL 528



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 110/204 (53%), Gaps = 1/204 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVTYN IIDGLCK G +  AK L  +M  + + PD +TY  LIH  C      EA++L
Sbjct: 516 PDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKL 575

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+  G+QPSVVT+ +++   C+ G +  A      M+   + PN  TY+ L+   C+
Sbjct: 576 LNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCM 635

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG+   A   F  M   G   +  +Y +LI+G C+     +A+ LY EM   GI P   T
Sbjct: 636 TGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCT 695

Query: 194 YNTLFLGLFEIHQVEHALKLFEEM 217
           +N LF G  E H + HA++  E +
Sbjct: 696 HNALFKGFDEGH-MYHAIEYMENI 718



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 126/260 (48%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TY  +++G  K   +  A+  F +M  + + PD   YN+ I      +    A 
Sbjct: 444 CFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAF 503

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   MM +G+ P  VT+NVI+D LCK G + +A RL   MV   ++P+  TY+ L+   
Sbjct: 504 QLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAH 563

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A +L   M S G +   V+Y IL++  C+   +  A   +R+M+  GI+P  
Sbjct: 564 CERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNE 623

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYN L   L    +   A + F EM    +A +  TY   IDG C+ G   +A+ L+  
Sbjct: 624 ITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFE 683

Query: 252 LGILKCELDIQAYNCLIDGL 271
           +       D   +N L  G 
Sbjct: 684 MHQNGIPPDYCTHNALFKGF 703



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 67/127 (52%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           NG +    +P+ VTY  ++   C+ G +  A   F +M    I P+ +TYN LIH LC  
Sbjct: 577 NGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMT 636

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
                A R F EM+++G+ P+  T+ +++D  C+ G   +A RL   M Q  + P+  T+
Sbjct: 637 GRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTH 696

Query: 125 STLMDGF 131
           + L  GF
Sbjct: 697 NALFKGF 703



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 3/192 (1%)

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
           L+ +R +   G+ P V   N +   L +  + +    ++ EM +  V     TYNT +D 
Sbjct: 187 LAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDS 246

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQ--AYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
             K G   EA  L + +        +    +N +I  L + G LE A++L  S+ R    
Sbjct: 247 FLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM-RLSKK 305

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
           A   TYN +I  L   G + KA  L ++ME   + P V+ +  +IHG ++  +       
Sbjct: 306 ASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVK 365

Query: 354 LHKMKEKKVMPD 365
             +M+   ++PD
Sbjct: 366 FAEMRAMGLLPD 377


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 206/402 (51%), Gaps = 36/402 (8%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
            C+PN V+Y  ++  LC +   D+A  L   M+   +  DVVTY +LI GLC A + ++A
Sbjct: 110 ACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKA 169

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             L  EM + G++P+VV ++ ++   CK+G+ ++  ++   M ++ + P+   Y+ L+D 
Sbjct: 170 VELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDS 229

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  GK  +A  +   M   G + + V+YN+LIN  CK   V+EA+ + ++M  KG+ P 
Sbjct: 230 LCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPD 289

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDD--VAADTSTYNTFIDGLCKNGYIVEAVEL 248
           VVTYNTL  GL ++ +++ A+ L EEM R    V  +  T+N+ I GLC  G + +A ++
Sbjct: 290 VVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV 349

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +    C +++  YN LI GL +  ++  A+EL   +    L  D  TY+I+I G C 
Sbjct: 350 RAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCK 409

Query: 309 DGQMDKAHDLFLDMEENAVAP----------------------------------NVIIF 334
             Q+D+A DL   M +  + P                                  +V+ +
Sbjct: 410 MWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAY 469

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            T+IHG  +        ELL  + ++ + PDA   S+V+++ 
Sbjct: 470 STMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMF 511



 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/429 (31%), Positives = 206/429 (48%), Gaps = 71/429 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + + VTY T+I GLC    VDKA  L  +M    I P+VV Y+SL+ G C +  W +  +
Sbjct: 147 RADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGK 206

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM ++G++P VV +  ++D LCK GK  +A  ++D+MV+R + PN  TY+ L++  C
Sbjct: 207 VFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMC 266

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG--IKPT 190
             G +  A  +   M   G   D V+YN LI G     E++EA+ L  EMV     +KP 
Sbjct: 267 KEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPN 326

Query: 191 VVT-----------------------------------YNTLFLGLFEIHQVEHALKLFE 215
           VVT                                   YN L  GL  +H+V  A++L +
Sbjct: 327 VVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMD 386

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT---------------LGILKCE-- 258
           EM    +  D+ TY+  I G CK   +  A +L  T               L +  CE  
Sbjct: 387 EMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQG 446

Query: 259 -----------------LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
                            LD+ AY+ +I G CK+G L+ A EL +S+    L  D VTY+I
Sbjct: 447 MMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSI 506

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +I+     G M+ A+ +   M  +   P+V +F +LI G+    + +KV+EL+ +M  K 
Sbjct: 507 VINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKN 566

Query: 362 VMPDASIVS 370
           +  D+ I+S
Sbjct: 567 IALDSKIIS 575



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/344 (32%), Positives = 182/344 (52%), Gaps = 3/344 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTYN +I+ +CKEG V +A  +  +M  + + PDVVTYN+LI GL    + +EA  
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311

Query: 73  LFFEMMDQG--VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           L  EM+     V+P+VVTFN ++  LC  G+M +A ++  +M +     N  TY+ L+ G
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG 371

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
                K+ +A EL   M S+G + D  +Y+ILI G+CK  +V+ A  L   M  +GI+P 
Sbjct: 372 LLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           +  Y  L + + E   +E A  LF EM  ++   D   Y+T I G CK G +  A EL +
Sbjct: 432 LFHYIPLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLK 490

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
           ++       D   Y+ +I+   KSG +E A  + + +     + DV  ++ +I G    G
Sbjct: 491 SIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKG 550

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           +++K  +L  +M    +A +  I  TL    V  N+   +++ L
Sbjct: 551 EINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSL 594



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 172/329 (52%), Gaps = 5/329 (1%)

Query: 50  DVVTYNSLIHGLCHANDWNEAKRLFFEMM---DQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           D V+YN+++  LC     + A  L   M        +P+ V++ V+M  LC +   D+A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
            LL  M    VR +  TY TL+ G C   ++++A EL G M   G + + V Y+ L+ GY
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           CK+   E+   ++ EM  KGI+P VV Y  L   L ++ + + A  + + M R  +  + 
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            TYN  I+ +CK G + EA+ + + +       D+  YN LI GL     ++ A+ L   
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 287 LPR--RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
           + R   ++  +VVT+N +I GLC+ G+M +A  +   MEE     N++ +  LI G +R+
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +K  K +EL+ +M    + PD+   S+++
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILI 404



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 147/272 (54%), Gaps = 6/272 (2%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSME---SMGCKHDDVS 158
           + EA+ LLD +    VR +A +Y+T++   C  G  +RA  L  +M       C+ + VS
Sbjct: 61  LGEATSLLDALPS--VR-DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y +L+   C ++  ++A+ L R M S G++  VVTY TL  GL +  +V+ A++L  EM 
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  +   Y++ + G CK+G   +  ++F  +     E D+  Y  LID LCK G+ +
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A  +   + RR L  +VVTYN++I+ +C +G + +A  +   M E  VAP+V+ + TLI
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            G   + +  + + LL +M   K +   ++V+
Sbjct: 298 KGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVT 329



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 136/278 (48%), Gaps = 4/278 (1%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           + KPN VT+N++I GLC  G + +A  +   M+      ++VTYN LI GL   +   +A
Sbjct: 322 IVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKA 381

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             L  EM   G++P   T+++++   CK  ++D A  LL  M  R + P  F Y  L+  
Sbjct: 382 MELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVA 441

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  G + RA  LF  M++     D V+Y+ +I+G CK  +++ A  L + +V +G+ P 
Sbjct: 442 MCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPD 500

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            VTY+ +     +   +E A  + ++M       D + +++ I G    G I + +EL R
Sbjct: 501 AVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIR 560

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
            +      LD +  + L   L  S        L +SLP
Sbjct: 561 EMITKNIALDSKIISTLSTSLVASNE---GKALLQSLP 595



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 85/155 (54%), Gaps = 3/155 (1%)

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGI---LKCELDIQAYNCLIDGLCKSGRLEIAL 281
           D  +YNT +  LC+ G+   A  L R + +     C  +  +Y  L+  LC     + A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            L RS+    + ADVVTY  +I GLC+  ++DKA +L  +M E+ + PNV+++ +L+ G+
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +  +   V ++  +M EK + PD  + + ++D L
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSL 230


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/369 (34%), Positives = 203/369 (55%), Gaps = 5/369 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN-INPDVVTYNSLIHGLCHANDWNEA 70
           C P+ VTYN +I+  C  G   KA  LF  MK E  + PD  TYN+LI GLC + +   A
Sbjct: 41  CVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGA 100

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           ++L  EM D+ +  +V T++ I+  L K  K +E+ ++L+ M+     P+ F ++ +M G
Sbjct: 101 RKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQG 160

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV--SKGIK 188
           F  +  + +A E++  M   G K D+VSY+ILI+G  K  +++E+L +  EM   + G  
Sbjct: 161 FARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYV 220

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P V+T++TL  GL    ++E AL++F  M       +  TY T I GLC+   +++A EL
Sbjct: 221 PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQAREL 280

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV-LVADVVTYNIMIHGLC 307
           F  +       D  AYN LI G CK G ++ A +L+R +     L   +VT+N +I G C
Sbjct: 281 FEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFC 340

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA- 366
             G++ +A++L  +M    +A +   +  LI G  R  K  + +E+  +M+EKK + D  
Sbjct: 341 KLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPV 400

Query: 367 SIVSMVVDL 375
           S VS V  L
Sbjct: 401 SCVSFVGGL 409



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 198/360 (55%), Gaps = 4/360 (1%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
            Y+ ++  L K G + +A  +F  MK E+  P +VTYN LI+  C+A ++ +A  LF  M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 78  -MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
             ++ V+P   T+N ++  LC +G  + A +LL  M  +++  N FTYS+++       K
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
              + ++   M + GC  D  ++N ++ G+ ++  +E+A  +Y+ MV  G KP  V+Y+ 
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 197 LFLGLFEIHQVEHALKLFEE--MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           L  GL +I +++ +LK+  E  M+      +  T++T I GLC+ G + +A+E+F ++  
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C+ +   Y  LI GLC++ ++  A ELF  + +  +  D V YN +I G C  G MD+
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 315 AHDLFLDMEENA-VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A  L+ +M   A + P ++ F TLI GF ++ K  +  EL+ +M  K +  D     +++
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 193/388 (49%), Gaps = 38/388 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENI------------------------- 47
           +P+  TYNT+I GLC  G  + A+ L  +M+ +NI                         
Sbjct: 78  EPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYK 137

Query: 48  ----------NPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
                     NPDV  +N ++ G   +N+  +A+ ++  M++ G +P  V++++++  L 
Sbjct: 138 VLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLA 197

Query: 98  KNGKMDEASRLLDLMVQRDVR--PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHD 155
           K GK+DE+ ++L  M  R     PN  T+STL+ G C TG++ +A E+FGSM   GCK +
Sbjct: 198 KIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPN 257

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
             +Y  LI G C+ ++V +A  L+ +M    I P  V YN+L  G  +   ++ A KL+ 
Sbjct: 258 KYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYR 317

Query: 216 EMQRDDVAADT-STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           EM        T  T+NT IDG CK G +  A EL   +G      D   Y  LI GL ++
Sbjct: 318 EMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRA 377

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            +L+ ALE+++ +  +  + D V+    + GLC  G +D+A+ +F    ++   PN   F
Sbjct: 378 TKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETF 437

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKV 362
             L    +++ +     +L+   K + +
Sbjct: 438 RILSESLIKLGRVEDAQKLMEPAKARDI 465



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 171/310 (55%), Gaps = 3/310 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+   +N ++ G  +   ++KA+ ++  M      PD V+Y+ LIHGL      +E+ 
Sbjct: 147 CNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESL 206

Query: 72  RLFFEMM--DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           ++  EM     G  P+V+TF+ ++  LC+ G++++A  +   M++   +PN +TY+TL+ 
Sbjct: 207 KILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIA 266

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIK 188
           G C   K+ +A ELF  M       D V+YN LI GYCK   ++EA  LYREM    G++
Sbjct: 267 GLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQ 326

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           PT+VT+NTL  G  ++ ++  A +L  EM    +AADT TY   I GL +   + EA+E+
Sbjct: 327 PTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEV 386

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           ++ +   K  LD  +    + GLCK+G ++ A  +F +  +   V +  T+ I+   L  
Sbjct: 387 YKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIK 446

Query: 309 DGQMDKAHDL 318
            G+++ A  L
Sbjct: 447 LGRVEDAQKL 456



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 113/215 (52%), Gaps = 1/215 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN  TY T+I GLC+   V +A+ LF +M    I PD V YNSLI G C     +EA+
Sbjct: 254 CKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAE 313

Query: 72  RLFFEMMD-QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           +L+ EM    G+QP++VTFN ++D  CK GK+  A+ L+  M  + +  +  TY  L+ G
Sbjct: 314 KLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAG 373

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
                K++ A E++  M       D VS    + G CK   +++A +++      G  P 
Sbjct: 374 LSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPN 433

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
             T+  L   L ++ +VE A KL E  +  D+ A 
Sbjct: 434 PETFRILSESLIKLGRVEDAQKLMEPAKARDITAQ 468



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 114/257 (44%), Gaps = 38/257 (14%)

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M    C     +Y+ ++    K   + +AL ++  M S+   P++VTYN L        +
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 207 VEHALKLFEEMQRDD-VAADTSTYNTFIDGLCKNGYIVEAVEL-------------FRTL 252
              AL LF+ M+R+  V  D  TYNT I GLC +G    A +L             F   
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 253 GILK----------------------CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
            I+K                      C  D+ A+N ++ G  +S  +E A E+++ +   
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVA--PNVIIFVTLIHGFVRINKPS 348
               D V+Y+I+IHGL   G++D++  +  +M   A    PNVI F TLIHG  R  +  
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELE 240

Query: 349 KVIELLHKMKEKKVMPD 365
           K +E+   M E    P+
Sbjct: 241 KALEVFGSMLEAGCKPN 257



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 67/135 (49%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G   +P  VT+NT+IDG CK G + +A  L  +M  + +  D  TY  LI GL  A   +
Sbjct: 322 GAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLD 381

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  ++ +M ++      V+    +  LCK G +D+A  + +   +    PN  T+  L 
Sbjct: 382 EALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILS 441

Query: 129 DGFCLTGKINRAEEL 143
           +     G++  A++L
Sbjct: 442 ESLIKLGRVEDAQKL 456



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 1/122 (0%)

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
           KC +   AY+ ++  L K+G L  ALE+F ++     V  +VTYN++I+  CN G+  KA
Sbjct: 5   KCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKA 64

Query: 316 HDLFLDME-ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            DLF  M+ E  V P+   + TLI G           +LL +M++K +  +    S ++ 
Sbjct: 65  LDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIK 124

Query: 375 LL 376
            L
Sbjct: 125 SL 126


>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
 gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
          Length = 319

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 111/295 (37%), Positives = 177/295 (60%), Gaps = 5/295 (1%)

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
           + P  VTFN+++D LCK GK+ EA  ++  M+++ V PN  TYS+LM+G+ L  ++  A 
Sbjct: 6   IMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEAR 65

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
           ++F +M + GC  D +SYNILING CK + ++EA  ++ EM  +G+ P   TYNTL  G 
Sbjct: 66  KVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGF 125

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
           +     +  ++LF++M     + D  TY+ F+ GL K GY+ +A+ELFR +       D+
Sbjct: 126 W-----KQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDL 180

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
             YN LID +CKSG+LE A ELF  L  + L+ DV ++  +I GLC +G +D+A+  F  
Sbjct: 181 VIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQ 240

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           ME +   P+   +  ++ GF++ N  S+  +L  +M ++    DA   ++  DLL
Sbjct: 241 MERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAADLL 295



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 166/296 (56%), Gaps = 5/296 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+N ++D LCK+G + +A+ +   M  + + P+ VTY+SL++G    N   EA+++
Sbjct: 8   PDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKV 67

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+ +G  P V+++N++++  CK  ++DEA ++ D M  R + PN  TY+TL+ GF  
Sbjct: 68  FNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGF-- 125

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
                +  +LF  M + GC  D V+Y+I ++G  K   +++AL L+REM +  + P +V 
Sbjct: 126 ---WKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVI 182

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L   + +  ++E A +LF ++    +  D  ++ + I GLC+ G + EA + FR + 
Sbjct: 183 YNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQME 242

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
              C  D  +YN ++ G  ++     A +LF+ +  R   AD +T  +    L  D
Sbjct: 243 RDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAADLLSKD 298



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 128/253 (50%), Gaps = 9/253 (3%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N  I   C P+ ++YN +I+G CK   +D+AK +F +M    + P+  TYN+L+ G    
Sbjct: 69  NAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGF--- 125

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
             W +  +LF +M  QG  P +VT+++ +  L K G +D+A  L   M    + P+   Y
Sbjct: 126 --WKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIY 183

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + L+D  C +GK+  A ELF  +   G   D  S+  +I+G C+   ++EA   +R+M  
Sbjct: 184 NILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMER 243

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
            G  P   +YN +  G  + +    A +LF+EM     +AD  T     D L K+    +
Sbjct: 244 DGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAADLLSKD----D 299

Query: 245 AVELFRTLGILKC 257
            + L R LG  +C
Sbjct: 300 NLGLKRLLGESEC 312



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 30/225 (13%)

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M S  I P  VT+N L   L +  ++  A  + + M    V  +T TY++ ++G      
Sbjct: 1   MTSFIIMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNR 60

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV-------- 293
           + EA ++F  +    C  D+ +YN LI+G CK+ R++ A ++F  +  R L+        
Sbjct: 61  VFEARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNT 120

Query: 294 ----------------------ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
                                  D+VTY+I +HGL   G +D+A +LF +M+ N + P++
Sbjct: 121 LLGGFWKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDL 180

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +I+  LI    +  K     EL  K+  K ++PD    + ++  L
Sbjct: 181 VIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGL 225


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 119/349 (34%), Positives = 193/349 (55%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTYNT+I   C+EG +++A  +   M  + + P + TYN++I+GLC    +  AK +  E
Sbjct: 154 VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 213

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M++ G+ P   T+N ++ E C+     EA  +   M+++ V P+  ++S+L+  F     
Sbjct: 214 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRH 273

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +++A   F  M+  G   D+V Y +L++GYC+N  + EAL +  EM+ +G    V+ YNT
Sbjct: 274 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 333

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  GL +   +  A KLF+EM       D  T+ T I G C++G + +A+ LF T+    
Sbjct: 334 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 393

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            + DI AYN LIDG CK G +E A EL+  +  R +  + +TY I+I+  C+ G + +A 
Sbjct: 394 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 453

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            L+  M E  + P ++   T+I G+ R    SK  E L +M  K V PD
Sbjct: 454 RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPD 502



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 197/362 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TYN II+GLCK+G   +AK + ++M    ++PD  TYN+L+   C  ++++EAK 
Sbjct: 185 KPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKE 244

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM+ QGV P +V+F+ ++    +N  +D+A      M +  + P+   Y+ LM G+C
Sbjct: 245 IFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYC 304

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A ++   M   GC  D ++YN ++NG CK K + +A  L+ EMV +G  P   
Sbjct: 305 RNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFY 364

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+ TL  G  +   +  AL LF  M + ++  D   YNT IDG CK G + +A EL+  +
Sbjct: 365 TFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGM 424

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K   +   Y  LI+  C  G +  A  L+  +  + +   +VT N +I G C  G  
Sbjct: 425 ISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDS 484

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            KA +    M    VAP+ I + TLI+GFVR +   K    ++KM+++ ++PD    ++V
Sbjct: 485 SKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVV 544

Query: 373 VD 374
           ++
Sbjct: 545 MN 546



 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 188/346 (54%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N+++ GL K  +V+ A  +  ++    I  +V T N +++ LC    +++ K    EM  
Sbjct: 87  NSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEG 146

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
            G+   +VT+N ++   C+ G ++EA  +++ M  + ++P+ FTY+ +++G C  G+  R
Sbjct: 147 NGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYAR 206

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A+ +   M ++G   D  +YN L+   C+     EA  ++ EM+ +G+ P +V++++L  
Sbjct: 207 AKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIA 266

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
                  ++ AL  F +M++  +  D   Y   + G C+NG ++EA+++   +    C L
Sbjct: 267 VFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL 326

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           D+ AYN +++GLCK   L  A +LF  +  R  + D  T+  +IHG C DG M KA  LF
Sbjct: 327 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 386

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             M +  + P+++ + TLI GF ++ +  K  EL   M  +K+ P+
Sbjct: 387 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPN 432



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 187/357 (52%), Gaps = 2/357 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GVV  P+ V+++++I    +   +D+A   F  MK   + PD V Y  L+HG C   +  
Sbjct: 253 GVV--PDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNML 310

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA ++  EM++QG    V+ +N I++ LCK   + +A +L D MV+R   P+ +T++TL+
Sbjct: 311 EALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLI 370

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C  G + +A  LFG+M     K D V+YN LI+G+CK  E+E+A  L+  M+S+ I 
Sbjct: 371 HGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIF 430

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  +TY  L      +  V  A +L++ M    +     T NT I G C++G   +A E 
Sbjct: 431 PNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEF 490

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +       D  +YN LI+G  +   ++ A      + +  L+ D++TYN++++G C 
Sbjct: 491 LGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCR 550

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            G+M +A  +   M E  + P+   +  LI+G V  +  ++      +M ++   PD
Sbjct: 551 QGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 145/286 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  + + YNTI++GLCKE  +  A  LF +M      PD  T+ +LIHG C   +  +A 
Sbjct: 324 CVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKAL 383

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M  + ++P +V +N ++D  CK G+M++AS L D M+ R + PN  TY  L++ +
Sbjct: 384 SLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAY 443

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G ++ A  L+  M   G K   V+ N +I GYC++ +  +A      M++KG+ P  
Sbjct: 444 CSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDH 503

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++YNTL  G      ++ A     +M+++ +  D  TYN  ++G C+ G + EA  + R 
Sbjct: 504 ISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRK 563

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           +       D   Y  LI+G      L  A      + +R    D V
Sbjct: 564 MIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 160/334 (47%), Gaps = 1/334 (0%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           V+  +AL   M G N   + + ++ LI     A    E    F  +  +G   S+   N 
Sbjct: 30  VEVVEALVSSMCG-NCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNS 88

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           ++  L K   ++ A  +   +V+  +  N +T + +++  C  GK +  +     ME  G
Sbjct: 89  LLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNG 148

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
              D V+YN LI  YC+   +EEA  +   M  KG+KP++ TYN +  GL +  +   A 
Sbjct: 149 IYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAK 208

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            +  EM    ++ DT+TYNT +   C+     EA E+F  +       D+ +++ LI   
Sbjct: 209 GILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVF 268

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
            ++  L+ AL  FR + +  LV D V Y +++HG C +G M +A  +  +M E     +V
Sbjct: 269 SRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDV 328

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           I + T+++G  +    +   +L  +M E+  +PD
Sbjct: 329 IAYNTILNGLCKEKMLTDADKLFDEMVERGALPD 362


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/354 (33%), Positives = 194/354 (54%), Gaps = 1/354 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY ++IDGLC EG  ++A ALF +  G+ I P+V+ YN+LI GL +     EA +L
Sbjct: 354 PDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQL 413

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM ++G+ P V TFN++++ LCK G + +A  L+ +M+ +   P+ FT++ L+ G+  
Sbjct: 414 ASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+  A E+   M   G   D  +YN L+NG CK  + E+ +  Y+ MV KG  P + T
Sbjct: 474 QLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFT 533

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L   L   H+++ AL L EEM+   V  D  T+ T IDG CKNG +  A  LFR + 
Sbjct: 534 FNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME 593

Query: 254 -ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +         YN +I    +   + +A +LF+ +  R L  D  TY +M+ G C  G +
Sbjct: 594 EVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNV 653

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           D  +   L+M EN   P++     +I+     ++  +   ++H+M +K ++P+A
Sbjct: 654 DLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 121/357 (33%), Positives = 189/357 (52%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T+N ++  LCK+G V + + L  ++    + P++ TYN  I GLC   + + A R+   +
Sbjct: 218 TFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRL 277

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +DQG +P VVT+N ++  LCKN K  EA   L  +V   + P++FTY+TL+ G+C  G +
Sbjct: 278 IDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMV 337

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             AE +  +    G   D+ +Y  LI+G C   E   AL+L+ E + KGIKP V+ YNTL
Sbjct: 338 QLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL     +  A +L  EM    +  +  T+N  ++GLCK G + +A  L + +     
Sbjct: 398 IKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             DI  +N LI G     ++E ALE+   +    +  DV TYN +++GLC   + +   +
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVME 517

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +  M E   APN+  F  L+    R +K  K + LL +MK K V PDA     ++D
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLID 574



 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 200/397 (50%), Gaps = 36/397 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN  I GLC++G +D A  +  ++  +   PDVVTYN LI+GLC  + + EA+  
Sbjct: 249 PNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVY 308

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++++G++P   T+N ++   CK G +  A R+L   V     P+ FTY +L+DG C 
Sbjct: 309 LGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCH 368

Query: 134 TGKINRAEELFGSMESMGCKHDDV-----------------------------------S 158
            G+ NRA  LF      G K + +                                   +
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQT 428

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +NIL+NG CK   V +A  L + M+SKG  P + T+N L  G     ++E+AL++ + M 
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMM 488

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
            + V  D  TYN+ ++GLCK     + +E ++T+    C  ++  +N L++ LC+  +L+
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLD 548

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE-NAVAPNVIIFVTL 337
            AL L   +  + +  D VT+  +I G C +G +D A+ LF  MEE   V+ +   +  +
Sbjct: 549 KALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNII 608

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           IH F      +   +L  +M ++ + PD     ++VD
Sbjct: 609 IHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVD 645



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 185/389 (47%), Gaps = 35/389 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDV-------------------- 51
           C+P   +YN I+  L   G+ D+A  ++++M+   I PDV                    
Sbjct: 107 CEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAAL 166

Query: 52  ---------------VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
                          V Y +++ G    N  +E   LF +M+  GV   + TFN ++  L
Sbjct: 167 RLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVL 226

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           CK G + E  +LLD +++R V PN FTY+  + G C  G+++ A  + G +   G K D 
Sbjct: 227 CKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDV 286

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           V+YN LI G CKN + +EA     ++V++G++P   TYNTL  G  +   V+ A ++   
Sbjct: 287 VTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVN 346

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
              +    D  TY + IDGLC  G    A+ LF        + ++  YN LI GL   G 
Sbjct: 347 AVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGL 406

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +  A +L   +  + L+ +V T+NI+++GLC  G +  A  L   M      P++  F  
Sbjct: 407 ILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LIHG+    K    +E+L  M +  V PD
Sbjct: 467 LIHGYSTQLKMENALEILDVMMDNGVDPD 495



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 175/349 (50%)

Query: 28  KEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVV 87
           ++G V +A  +F +M   +  P V +YN+++  L  +  +++A +++  M D+G+ P V 
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVY 147

Query: 88  TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
           +F + M   C+  +   A RLL+ M  +    N   Y T++ GF      +   ELFG M
Sbjct: 148 SFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKM 207

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
            + G      ++N L++  CK  +V+E   L  +++ +G+ P + TYN    GL +  ++
Sbjct: 208 LASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGEL 267

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
           + A+++   +       D  TYN  I GLCKN    EA      L     E D   YN L
Sbjct: 268 DAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTL 327

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           I G CK G +++A  +  +      V D  TY  +I GLC++G+ ++A  LF +     +
Sbjct: 328 IAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGI 387

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            PNVI++ TLI G        +  +L  +M EK ++P+    +++V+ L
Sbjct: 388 KPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGL 436



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 178/353 (50%), Gaps = 2/353 (0%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N  +G   KPN + YNT+I GL  +G + +A  L  +M  + + P+V T+N L++GLC  
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKM 439

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
              ++A  L   M+ +G  P + TFN+++       KM+ A  +LD+M+   V P+ +TY
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTY 499

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           ++L++G C T K     E + +M   GC  +  ++NIL+   C+  ++++AL L  EM +
Sbjct: 500 NSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKN 559

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD-VAADTSTYNTFIDGLCKNGYIV 243
           K + P  VT+ TL  G  +   ++ A  LF +M+    V+  T TYN  I    +   + 
Sbjct: 560 KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVT 619

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
            A +LF+ +       D   Y  ++DG CK+G +++  +    +     +  + T   +I
Sbjct: 620 MAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVI 679

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           + LC + ++ +A  +   M +  + P  +  +   H    +  P  V+E L K
Sbjct: 680 NCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTI-FDHDKKEVAAPKLVLEDLLK 731



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 135/308 (43%), Gaps = 12/308 (3%)

Query: 66  DWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF-- 122
           D  +A  +F  M  + G + ++ T+  I+++L   GK +    +L      D+R N    
Sbjct: 19  DPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVL-----VDMRQNVGNH 73

Query: 123 ----TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
                Y   M  +   GK+  A  +F  M+   C+    SYN +++    +   ++A  +
Sbjct: 74  MLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKV 133

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
           Y  M  +GI P V ++           +   AL+L   M       +   Y T + G  +
Sbjct: 134 YMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYE 193

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
             +  E  ELF  +      L +  +N L+  LCK G ++   +L   + +R ++ ++ T
Sbjct: 194 ENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFT 253

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           YN  I GLC  G++D A  +   + +    P+V+ +  LI+G  + +K  +    L K+ 
Sbjct: 254 YNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLV 313

Query: 359 EKKVMPDA 366
            + + PD+
Sbjct: 314 NEGLEPDS 321


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 194/387 (50%), Gaps = 32/387 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  T+N +I GLCK   +  A  L  +M      PD +TY  L+HGLC     NEA+
Sbjct: 284 CMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEAR 343

Query: 72  RLFFE--------------------------------MMDQGVQPSVVTFNVIMDELCKN 99
           ++  +                                M++ G QP + T+N++M  LCK 
Sbjct: 344 KILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKE 403

Query: 100 GKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
           G +  A  L++ M +R   PN  TY+ L++G C  G +  A  +   M + G   + V Y
Sbjct: 404 GSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIY 463

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           N LI   C+ ++V  AL+L  EM +KG KP + TYN+L  GL ++ +++ A +LF  M  
Sbjct: 464 NCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLL 523

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
           D   A+  TYNT I  L + G   +A+ L   +    C LD   YN LI   CK G +E 
Sbjct: 524 DGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEK 583

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
            LEL+  +    L AD ++ NIMI+GLC  G++D A +   D       P+++ + ++++
Sbjct: 584 GLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLN 643

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDA 366
           G  ++ +  + + L  +++ + V PDA
Sbjct: 644 GLCKVGRIKEALNLFDRLQVEGVRPDA 670



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 177/331 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TYN ++ GLCKEG +  A+ L  +M      P+V+TY  L++GLC A    EA  
Sbjct: 387 QPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGL 446

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM  +G+  + V +N ++  LC+  K+  A  LL  M  +  +P+ FTY++L+ G C
Sbjct: 447 VLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLC 506

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +I+ A  LF +M   G   ++V+YN LI+   +    ++AL+L  +M+ +G     +
Sbjct: 507 KVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKI 566

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L     ++  +E  L+L+E+M  D + ADT + N  I+GLCK G +  A E  R  
Sbjct: 567 TYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDA 626

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  DI  YN +++GLCK GR++ AL LF  L    +  D  TYN  I   C +G +
Sbjct: 627 INRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMV 686

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           + A   F    EN   P+ + +  L++  ++
Sbjct: 687 NDACSFFYRGIENGFVPSNLTWNVLVYTLLK 717



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/326 (34%), Positives = 171/326 (52%), Gaps = 1/326 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQ-MKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           PN    NT+I+G    G + +A++   + M      PD+ TYN L+HGLC     + A+ 
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARD 411

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  +G +P+V+T+ ++++ LCK G ++EA  +L  M  R +  N+  Y+ L+   C
Sbjct: 412 LVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALC 471

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K++ A  L   M + GCK D  +YN LI G CK   ++EA  L+  M+  G     V
Sbjct: 472 RKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNV 531

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL   L      + AL L  +M       D  TYN  I   CK G I + +EL+  +
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +     D  + N +I+GLCK G+++ A E  R    R  V D+VTYN +++GLC  G++
Sbjct: 592 IMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRI 651

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLI 338
            +A +LF  ++   V P+   + T I
Sbjct: 652 KEALNLFDRLQVEGVRPDAFTYNTFI 677



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/345 (32%), Positives = 177/345 (51%), Gaps = 5/345 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   T+  ++  LC    VD A +L   M      P+ + Y +LIH L   N  +EA +L
Sbjct: 216 PTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKL 275

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G  P V TFN ++  LCK  K+ +A++L+D M+ R   P+  TY  L+ G C 
Sbjct: 276 LEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCR 335

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE-MVSKGIKPTVV 192
            GK+N A ++   +  + C ++ +  N LINGY  + +++EA S   E M++ G +P + 
Sbjct: 336 IGKLNEARKI---LIKIPCPNNAI-LNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIF 391

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L  GL +   +  A  L  EM R     +  TY   ++GLCK G + EA  +   +
Sbjct: 392 TYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEM 451

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 ++   YNCLI  LC+  ++ +AL L   +  +    D+ TYN +I+GLC   ++
Sbjct: 452 SARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRI 511

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           D+A  LF +M  +    N + + TLIH  +R     K + L++ M
Sbjct: 512 DEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDM 556



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 155/309 (50%), Gaps = 2/309 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN +TY  +++GLCK G +++A  +  +M    +  + V YN LI  LC     + A 
Sbjct: 421 CEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVAL 480

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM  +G +P + T+N ++  LCK  ++DEA RL   M+      N  TY+TL+   
Sbjct: 481 NLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHAL 540

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G   +A  L   M   GC  D ++YN LI  +CK   +E+ L LY +M+  G+    
Sbjct: 541 LRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADT 600

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++ N +  GL ++ +V++A +   +        D  TYN+ ++GLCK G I EA+ LF  
Sbjct: 601 ISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDR 660

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L +     D   YN  I   CK G +  A   F        V   +T+N++++ L    Q
Sbjct: 661 LQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLK--Q 718

Query: 312 MDKAHDLFL 320
            ++ ++ F+
Sbjct: 719 SNQENNFFV 727



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 166/340 (48%), Gaps = 6/340 (1%)

Query: 28  KEGFVDKAKALFLQMKGENI-NPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           K G   +A  L L M+   +  P   +Y+ ++  L   N    A  +F++M+ +GV P+V
Sbjct: 159 KAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTV 218

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
            TF ++M  LC   ++D A  LL  M +    PN+  Y TL+       +++ A +L   
Sbjct: 219 FTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEE 278

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M  MGC  D  ++N +I+G CK  ++ +A  L   M+ +G  P  +TY  L  GL  I +
Sbjct: 279 MFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGK 338

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF-RTLGILKCELDIQAYN 265
           +  A K+  ++       + +  NT I+G   +G + EA      T+     + DI  YN
Sbjct: 339 LNEARKILIKIP----CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYN 394

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
            L+ GLCK G L  A +L   + RR    +V+TY I+++GLC  G +++A  +  +M   
Sbjct: 395 ILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSAR 454

Query: 326 AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +  N +I+  LI    R  K    + LL +M  K   PD
Sbjct: 455 GLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPD 494



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 156/357 (43%), Gaps = 41/357 (11%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL---- 109
           Y   I+ L     +    +L  +M ++G+      F +IM    K G+  +A RLL    
Sbjct: 115 YYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMR 174

Query: 110 ------------DL--------------------MVQRDVRPNAFTYSTLMDGFCLTGKI 137
                       DL                    M+ + V P  FT+  +M   C+  ++
Sbjct: 175 AVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEV 234

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  L   M   GC  + + Y  LI+   +  +V EAL L  EM   G  P V T+N +
Sbjct: 235 DSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDV 294

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL +++++  A KL + M       D  TY   + GLC+ G + EA ++   L  + C
Sbjct: 295 IHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI---LIKIPC 351

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELF-RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
             +    N LI+G   SG+L+ A      ++       D+ TYNI++HGLC +G +  A 
Sbjct: 352 P-NNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFAR 410

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           DL  +M      PNVI +  L++G  +     +   +LH+M  + +  ++ I + ++
Sbjct: 411 DLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLI 467



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 101/203 (49%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N VTYNT+I  L + G   KA  L   M       D +TYN LI   C   +  +   L+
Sbjct: 529 NNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELY 588

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M+  G+    ++ N++++ LCK GK+D A   L   + R   P+  TY+++++G C  
Sbjct: 589 EQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKV 648

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+I  A  LF  ++  G + D  +YN  I+  CK   V +A S +   +  G  P+ +T+
Sbjct: 649 GRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTW 708

Query: 195 NTLFLGLFEIHQVEHALKLFEEM 217
           N L   L +    E+   + +E+
Sbjct: 709 NVLVYTLLKQSNQENNFFVLDEL 731



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 88/171 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  + +TYN +I   CK G ++K   L+ QM  + +  D ++ N +I+GLC     + A 
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAF 620

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
               + +++G  P +VT+N +++ LCK G++ EA  L D +    VRP+AFTY+T +   
Sbjct: 621 EFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQ 680

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           C  G +N A   F      G    ++++N+L+    K    E    +  E+
Sbjct: 681 CKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 1/191 (0%)

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
            KG   T   Y      L  I + +   KL  +M+ + +    S +   +    K G   
Sbjct: 105 QKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPG 164

Query: 244 EAVELFRTL-GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
           +A+ L   +  +  CE   ++Y+ +++ L      ++A  +F  +  + +   V T+ I+
Sbjct: 165 QAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIV 224

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           +  LC   ++D A  L  DM ++   PN I++ TLIH   + N+ S+ ++LL +M     
Sbjct: 225 MKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGC 284

Query: 363 MPDASIVSMVV 373
           MPD    + V+
Sbjct: 285 MPDVQTFNDVI 295


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 194/387 (50%), Gaps = 32/387 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  T+N +I GLCK   +  A  L  +M      PD +TY  L+HGLC     NEA+
Sbjct: 284 CMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEAR 343

Query: 72  RLFFE--------------------------------MMDQGVQPSVVTFNVIMDELCKN 99
           ++  +                                M++ G QP + T+N++M  LCK 
Sbjct: 344 KILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKE 403

Query: 100 GKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
           G +  A  L++ M +R   PN  TY+ L++G C  G +  A  +   M + G   + V Y
Sbjct: 404 GSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIY 463

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           N LI   C+ ++V  AL+L  EM +KG KP + TYN+L  GL ++ +++ A +LF  M  
Sbjct: 464 NCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLL 523

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
           D   A+  TYNT I  L + G   +A+ L   +    C LD   YN LI   CK G +E 
Sbjct: 524 DGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEK 583

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
            LEL+  +    L AD ++ NIMI+GLC  G++D A +   D       P+++ + ++++
Sbjct: 584 GLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLN 643

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDA 366
           G  ++ +  + + L  +++ + V PDA
Sbjct: 644 GLCKVGRIKEALNLFDRLQVEGVRPDA 670



 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/326 (34%), Positives = 171/326 (52%), Gaps = 1/326 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQ-MKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           PN    NT+I+G    G + +A++   + M      PD+ TYN L+HGLC     + A+ 
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARD 411

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  +G +P+V+T+ ++++ LCK G ++EA  +L  M  R +  N+  Y+ L+   C
Sbjct: 412 LVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALC 471

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K++ A  L   M + GCK D  +YN LI G CK   ++EA  L+  M+  G     V
Sbjct: 472 RKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNV 531

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL   L      + AL L  +M       D  TYN  I   CK G I + +EL+  +
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +     D  + N +I+GLCK G+++ A E  R    R  V D+VTYN +++GLC  G++
Sbjct: 592 IMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRI 651

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLI 338
            +A +LF  ++   V P+   + T I
Sbjct: 652 KEALNLFDRLQVEGVRPDAFTYNTFI 677



 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 177/331 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TYN ++ GLCKEG +  A+ L  +M      P+V+TY  L++GLC A    EA  
Sbjct: 387 QPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGL 446

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM  +G+  + V +N ++  LC+  K+  A  LL  M  +  +P+ FTY++L+ G C
Sbjct: 447 VLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLC 506

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +I+ A  LF +M   G   ++V+YN LI+   +    ++AL+L  +M+ +G     +
Sbjct: 507 KVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKI 566

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L     ++  +E  L+L+E+M  D + ADT + N  I+GLCK G +  A E  R  
Sbjct: 567 TYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDA 626

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  DI  YN +++GLCK GR++ AL LF  L    +  D  TYN  I   C +G +
Sbjct: 627 INRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMV 686

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           + A   F    EN   P+ + +  L++  ++
Sbjct: 687 NDACLFFYRGIENGFVPSNLTWNVLVYTLLK 717



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/346 (32%), Positives = 177/346 (51%), Gaps = 5/346 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P   T+  ++  LC    VD A +L   M      P+ + Y +LIH L   N  +EA +
Sbjct: 215 SPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALK 274

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM   G  P V TFN ++  LCK  K+ +A++L+D M+ R   P+  TY  L+ G C
Sbjct: 275 LLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLC 334

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE-MVSKGIKPTV 191
             GK+N A ++   +  + C ++ +  N LINGY  + +++EA S   E M++ G +P +
Sbjct: 335 RIGKLNEARKI---LIKIPCPNNAI-LNTLINGYVMSGQLKEAQSFLNETMINFGFQPDI 390

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN L  GL +   +  A  L  EM R     +  TY   ++GLCK G + EA  +   
Sbjct: 391 FTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHE 450

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +      ++   YNCLI  LC+  ++ +AL L   +  +    D+ TYN +I+GLC   +
Sbjct: 451 MSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDR 510

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           +D+A  LF +M  +    N + + TLIH  +R     K + L++ M
Sbjct: 511 IDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDM 556



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 155/309 (50%), Gaps = 2/309 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN +TY  +++GLCK G +++A  +  +M    +  + V YN LI  LC     + A 
Sbjct: 421 CEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVAL 480

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM  +G +P + T+N ++  LCK  ++DEA RL   M+      N  TY+TL+   
Sbjct: 481 NLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHAL 540

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G   +A  L   M   GC  D ++YN LI  +CK   +E+ L LY +M+  G+    
Sbjct: 541 LRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADT 600

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++ N +  GL ++ +V++A +   +        D  TYN+ ++GLCK G I EA+ LF  
Sbjct: 601 ISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDR 660

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L +     D   YN  I   CK G +  A   F        V   +T+N++++ L    Q
Sbjct: 661 LQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLK--Q 718

Query: 312 MDKAHDLFL 320
            ++ ++ F+
Sbjct: 719 SNQENNFFV 727



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 166/340 (48%), Gaps = 6/340 (1%)

Query: 28  KEGFVDKAKALFLQMKGENI-NPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           K G   +A  L L M+   +  P   +Y+ ++  L   N    A  +F++M+ +GV P+V
Sbjct: 159 KAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTV 218

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
            TF ++M  LC   ++D A  LL  M +    PN+  Y TL+       +++ A +L   
Sbjct: 219 FTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEE 278

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M  MGC  D  ++N +I+G CK  ++ +A  L   M+ +G  P  +TY  L  GL  I +
Sbjct: 279 MFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGK 338

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF-RTLGILKCELDIQAYN 265
           +  A K+  ++       + +  NT I+G   +G + EA      T+     + DI  YN
Sbjct: 339 LNEARKILIKIP----CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYN 394

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
            L+ GLCK G L  A +L   + RR    +V+TY I+++GLC  G +++A  +  +M   
Sbjct: 395 ILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSAR 454

Query: 326 AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +  N +I+  LI    R  K    + LL +M  K   PD
Sbjct: 455 GLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPD 494



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 156/357 (43%), Gaps = 41/357 (11%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL---- 109
           Y   I+ L     +    +L  +M ++G+      F +IM    K G+  +A RLL    
Sbjct: 115 YYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMR 174

Query: 110 ------------DL--------------------MVQRDVRPNAFTYSTLMDGFCLTGKI 137
                       DL                    M+ + V P  FT+  +M   C+  ++
Sbjct: 175 AVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEV 234

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  L   M   GC  + + Y  LI+   +  +V EAL L  EM   G  P V T+N +
Sbjct: 235 DSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDV 294

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL +++++  A KL + M       D  TY   + GLC+ G + EA ++   L  + C
Sbjct: 295 IHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI---LIKIPC 351

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELF-RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
             +    N LI+G   SG+L+ A      ++       D+ TYNI++HGLC +G +  A 
Sbjct: 352 P-NNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFAR 410

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           DL  +M      PNVI +  L++G  +     +   +LH+M  + +  ++ I + ++
Sbjct: 411 DLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLI 467



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 100/203 (49%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N VTYNT+I  L + G   KA  L   M       D +TYN LI   C   +  +   L+
Sbjct: 529 NNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELY 588

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M+  G+    ++ N++++ LCK GK+D A   L   + R   P+  TY+++++G C  
Sbjct: 589 EQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKV 648

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+I  A  LF  ++  G + D  +YN  I+  CK   V +A   +   +  G  P+ +T+
Sbjct: 649 GRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTW 708

Query: 195 NTLFLGLFEIHQVEHALKLFEEM 217
           N L   L +    E+   + +E+
Sbjct: 709 NVLVYTLLKQSNQENNFFVLDEL 731



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 88/171 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  + +TYN +I   CK G ++K   L+ QM  + +  D ++ N +I+GLC     + A 
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAF 620

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
               + +++G  P +VT+N +++ LCK G++ EA  L D +    VRP+AFTY+T +   
Sbjct: 621 EFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQ 680

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           C  G +N A   F      G    ++++N+L+    K    E    +  E+
Sbjct: 681 CKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 1/191 (0%)

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
            KG   T   Y      L  I + +   KL  +M+ + +    S +   +    K G   
Sbjct: 105 QKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPG 164

Query: 244 EAVELFRTL-GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
           +A+ L   +  +  CE   ++Y+ +++ L      ++A  +F  +  + +   V T+ I+
Sbjct: 165 QAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIV 224

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           +  LC   ++D A  L  DM ++   PN I++ TLIH   + N+ S+ ++LL +M     
Sbjct: 225 MKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGC 284

Query: 363 MPDASIVSMVV 373
           MPD    + V+
Sbjct: 285 MPDVQTFNDVI 295


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/387 (34%), Positives = 200/387 (51%), Gaps = 35/387 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTYNT++D  CK+G V +A  L  QM+    +P+ VTYN L++GL H+ +  +AK L
Sbjct: 200 PTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKEL 259

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+  G++ SV T++ ++   C+ G+++EASRL + M+ R   P   TY+T+M G C 
Sbjct: 260 IQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCK 319

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A +L   M +     D VSYN LI GY +   + EA  L+ E+  + + P+VVT
Sbjct: 320 WGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVT 379

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF---- 249
           YNTL  GL  +  ++ A++L +EM +     D  T+ TF+ G CK G +  A ELF    
Sbjct: 380 YNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEML 439

Query: 250 -------------RTLGILKC------------------ELDIQAYNCLIDGLCKSGRLE 278
                        R +G LK                     D+  YN  IDGL K G L+
Sbjct: 440 NRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLK 499

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A EL + +    LV D VTY  +IH     G + KA  LFL+M    + P+V+ +  LI
Sbjct: 500 EASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLI 559

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPD 365
           H +    +    I    +M EK V P+
Sbjct: 560 HSYAVRGRLKLAILHFFEMHEKGVHPN 586



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 194/353 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTYNTI+ GLCK G V  A+ L   M  +N+ PD+V+YN+LI+G     +  EA  L
Sbjct: 305 PTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLL 364

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E+  + + PSVVT+N ++D LC+ G +D A RL D M++    P+ FT++T + GFC 
Sbjct: 365 FAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCK 424

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A+ELF  M + G + D  +Y   I G  K  +  +A  +  EM+++G  P ++T
Sbjct: 425 MGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLIT 484

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN    GL ++  ++ A +L ++M  + +  D  TY + I      G++ +A  LF  + 
Sbjct: 485 YNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEML 544

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  +  Y  LI      GRL++A+  F  +  + +  +V+TYN +I+GLC   +MD
Sbjct: 545 SKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMD 604

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +A++ F +M+   ++PN   +  LI+    +    + + L   M ++++ PD+
Sbjct: 605 QAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDS 657



 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 114/348 (32%), Positives = 187/348 (53%), Gaps = 1/348 (0%)

Query: 28  KEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC-HANDWNEAKRLFFEMMDQGVQPSV 86
           K+  ++K   +F +M  + + PDV   N ++  L    N+ + A+ ++  M++ G+ P+V
Sbjct: 143 KKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTV 202

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
           VT+N ++D  CK G + EA +LL  M      PN  TY+ L++G   +G++ +A+EL   
Sbjct: 203 VTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQD 262

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M  +G +    +Y+ LI GYC+  ++EEA  L  EM+S+G  PTVVTYNT+  GL +  +
Sbjct: 263 MLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGR 322

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           V  A KL + M   ++  D  +YNT I G  + G I EA  LF  L        +  YN 
Sbjct: 323 VSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNT 382

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LIDGLC+ G L++A+ L   + +     DV T+   + G C  G +  A +LF +M    
Sbjct: 383 LIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRG 442

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + P+   ++T I G +++  PSK   +  +M  +   PD    ++ +D
Sbjct: 443 LQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFID 490



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 149/305 (48%), Gaps = 35/305 (11%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+IDGLC+ G +D A  L  +M     +PDV T+ + + G C   +   AK L
Sbjct: 375 PSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKEL 434

Query: 74  FFEMMDQGVQPS-----------------------------------VVTFNVIMDELCK 98
           F EM+++G+QP                                    ++T+NV +D L K
Sbjct: 435 FDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHK 494

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
            G + EAS L+  M+   + P+  TY++++    + G + +A  LF  M S G     V+
Sbjct: 495 LGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVT 554

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y +LI+ Y     ++ A+  + EM  KG+ P V+TYN L  GL ++ +++ A   F EMQ
Sbjct: 555 YTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQ 614

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              ++ +  TY   I+  C  G+  EA+ L++ +   + + D   +  L+  L K  +L 
Sbjct: 615 AKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLH 674

Query: 279 IALEL 283
           +   L
Sbjct: 675 VVRHL 679



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 145/295 (49%), Gaps = 23/295 (7%)

Query: 74  FFEMMDQ--GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           FF   ++  G + S ++++VI+D L +NG M  A  +++ +V           S  M+  
Sbjct: 67  FFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVV-----------SVKME-- 113

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G I+       SM S+    D     +L+  Y K   +E+ L ++ +MVSKG+ P V
Sbjct: 114 --NGVIDVVSSSEVSMPSVKLILD-----LLLWIYVKKSLLEKCLLVFYKMVSKGLLPDV 166

Query: 192 VTYNTLFLGLFEI-HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
              N +   L +  + ++ A +++  M    +     TYNT +D  CK G + EA++L  
Sbjct: 167 KNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLF 226

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +  + C  +   YN L++GL  SG +E A EL + + R  L   V TY+ +I G C  G
Sbjct: 227 QMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKG 286

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           Q+++A  L  +M      P V+ + T+++G  +  + S   +LL  M  K +MPD
Sbjct: 287 QIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPD 341


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 212/395 (53%), Gaps = 35/395 (8%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  TYN+++  LCKEG + +A +++ +M  + + P VV+YN++I G C   D + A  +F
Sbjct: 432 NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVF 491

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+++G++P+++T++V+MD   K G  + A  L D M   ++ P+ FT + +++G C  
Sbjct: 492 VEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKA 551

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+ + +++    +   G     ++YN +I+G+ K   V  AL++Y EM   G+ P V TY
Sbjct: 552 GRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTY 611

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL------ 248
             L  G  + + ++ ALK+ +EM+   +  D + Y   IDG C+ G +V A +L      
Sbjct: 612 TNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQE 671

Query: 249 ----------------FRTLGILKCEL-------------DIQAYNCLIDGLCKSGRLEI 279
                           FR L  ++  L             D+Q Y  LI GL K G+L  
Sbjct: 672 VGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLF 731

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A EL+  +  + ++ D++TY+++IHGLCN GQ++ A  +  DM+   + P V I+ TLI 
Sbjct: 732 ASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLIT 791

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           G  +     +   L ++M +K ++PD +   ++V+
Sbjct: 792 GHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVN 826



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 180/331 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN +TY+ ++DG  K+G  + A  L+ +M+GENI P   T N +I+GLC A   +E++ 
Sbjct: 500 KPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQD 559

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +++ +G  P+ +T+N I+D   K G ++ A  +   M +  V PN FTY+ L++GFC
Sbjct: 560 RLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFC 619

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +  ++ A ++   M++ G + D   Y  LI+G+C+  ++  A  L  E+   G+ P  V
Sbjct: 620 KSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKV 679

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+++  G  ++  +E AL L + M  + +  D   Y T I GL K G ++ A EL+  +
Sbjct: 680 VYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEM 739

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D+  Y+ LI GLC  G+LE A ++   + R+ +   V  YN +I G   +G +
Sbjct: 740 LAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNL 799

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            +A  L  +M +  + P+   +  L++G V+
Sbjct: 800 QEAFRLHNEMLDKGLVPDDTTYDILVNGKVK 830



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 179/362 (49%), Gaps = 1/362 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +  T + +I    +EG +++A+  F + K + +  D   Y+ +I  +C   D   A  
Sbjct: 221 KGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALG 280

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM D+G  P  V F  ++    K GKM EA ++   M+      N    +TLM G+C
Sbjct: 281 LLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYC 340

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A ELF  M   G   ++V+Y ++I   CKN  +++A  +Y +M +K I PTV 
Sbjct: 341 KQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVF 400

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
             N+L  G  +    E A KLF+E     + A+  TYN+ +  LCK G + EA  ++  +
Sbjct: 401 NVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKM 459

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   + +YN +I G C+ G ++ A  +F  +  + L  +++TY++++ G    G  
Sbjct: 460 VRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDT 519

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A  L+  M    +AP+      +I+G  +  + S+  + L K+ ++  +P     + +
Sbjct: 520 EYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCI 579

Query: 373 VD 374
           +D
Sbjct: 580 ID 581



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 176/365 (48%), Gaps = 5/365 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P     N  +  L K   + +A+ ++ +M  + +  D  T + +I          EA+  
Sbjct: 187 PCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGW 246

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E  ++GV+     ++++++ +CK      A  LL  M  +   P+   ++ ++ G C+
Sbjct: 247 FREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVI-GVCM 305

Query: 134 -TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A ++ G M S G   + V    L+ GYCK  +++ AL L+ +M   GI P  V
Sbjct: 306 KQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNV 365

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  +     +   ++ A +++ +M+  D++      N+ I G  K     EA +LF   
Sbjct: 366 TYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDE- 424

Query: 253 GILKCEL-DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
             + C + ++  YN L+  LCK G++  A  ++  + R+ +   VV+YN MI G C  G 
Sbjct: 425 -AVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGD 483

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           MD A+ +F++M E  + PN+I +  L+ G+ +         L  +M+ + + P     ++
Sbjct: 484 MDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNI 543

Query: 372 VVDLL 376
           +++ L
Sbjct: 544 IINGL 548



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 121/234 (51%), Gaps = 2/234 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           +IGV   PN  TY  +I+G CK   +D A  +  +MK + I  DV  Y +LI G C   D
Sbjct: 601 KIGV--SPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGD 658

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
              A +L  E+ + G+ P+ V ++ ++    K   M+ A  L   M+   +  +   Y+T
Sbjct: 659 MVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTT 718

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ G    GK+  A EL+  M + G   D ++Y++LI+G C   ++E A  +  +M  K 
Sbjct: 719 LISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKC 778

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           + PTV  YNTL  G F+   ++ A +L  EM    +  D +TY+  ++G  K+G
Sbjct: 779 MTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDG 832



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 133/315 (42%), Gaps = 52/315 (16%)

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
           F   D G  PSVV   +I           E+SR LD   + D R   F Y  L++ +  T
Sbjct: 125 FASDDWGPVPSVVVARLI-----------ESSRRLDF--ESDSR--VFNY--LLNSYVKT 167

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            +IN A + F S+            NI ++   KN  + EA  +Y +M SKG+K    T 
Sbjct: 168 KRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATI 227

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK---------------- 238
           + +        ++E A   F E +   V  D   Y+  I+ +CK                
Sbjct: 228 SVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRD 287

Query: 239 NGYIVEAVELFRTLGI-----------------LKC--ELDIQAYNCLIDGLCKSGRLEI 279
            G++   V   R +G+                 L C   +++     L+ G CK G L+ 
Sbjct: 288 KGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDS 347

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           ALELF  +    +  + VTY ++I   C +G MDKA++++  M+   ++P V    +LI 
Sbjct: 348 ALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIR 407

Query: 340 GFVRINKPSKVIELL 354
           G+++   P +  +L 
Sbjct: 408 GYLKARSPEEASKLF 422



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 103/258 (39%), Gaps = 35/258 (13%)

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
            L  S   +  + D   +N L+N Y K K + +A+  +  ++ K I P +   N     L
Sbjct: 140 RLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSEL 199

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
            + + +  A  ++ +M    V  D +T +  I    + G + EA   FR       ELD 
Sbjct: 200 VKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDA 259

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSL------PRRVLVA--------------------- 294
           +AY+ +I+ +CK      AL L R +      P  V+                       
Sbjct: 260 RAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGE 319

Query: 295 --------DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
                   +VV    ++ G C  G +D A +LF  M EN + PN + +  +I    +   
Sbjct: 320 MLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGN 379

Query: 347 PSKVIELLHKMKEKKVMP 364
             K  E+ ++MK K + P
Sbjct: 380 MDKAYEIYNQMKNKDISP 397



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 53/89 (59%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TY+ +I GLC +G ++ A+ +   M  + + P V  YN+LI G     +  EA RL
Sbjct: 746 PDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRL 805

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKM 102
             EM+D+G+ P   T++++++   K+G +
Sbjct: 806 HNEMLDKGLVPDDTTYDILVNGKVKDGNL 834


>gi|357442909|ref|XP_003591732.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480780|gb|AES61983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 344

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/357 (34%), Positives = 199/357 (55%), Gaps = 22/357 (6%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G +   + V YNTIIDGLCK+  V+ A  L+ +M  E I+PDV T+NSLI+G C      
Sbjct: 10  GKLVNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLK 69

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  LF +M+ + + PSV TF +++D LCK GKM EA  ++ +M++  V PN  TY+++M
Sbjct: 70  DAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIM 129

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +G+CL  ++N+ + +F ++  MG   +  SYNI+ING+CK K V EAL L++EM  +GI 
Sbjct: 130 EGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIV 189

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  VTY++L  GL +   +   L     M    +   T  Y   ID LCK+ ++ +A+ L
Sbjct: 190 PITVTYSSLIDGLCKSTMLGSLLMRCMLMVNHLIYPLTVLY---IDALCKSNHLDKAIAL 246

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            + +                      GRL+ A ++F+ L  +    ++ TYNIMI+GLC 
Sbjct: 247 VKKIK-------------------DQGRLKNAQDVFQDLLIKGYSLNIQTYNIMINGLCK 287

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +G  D+A  L   M++  + P+ + + T I      ++  K  +L  KM  + ++ +
Sbjct: 288 EGLFDEAEALLSKMDDYGIIPDAVTYETNIRALFHKDENEKAEKLFRKMIARGLLKE 344



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 164/342 (47%), Gaps = 54/342 (15%)

Query: 41  QMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
           Q++G+ +N DVV YN++I GLC     N+A  L+ EM+ + + P V TFN ++   C  G
Sbjct: 7   QIEGKLVNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIG 66

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           ++ +A  L   MV +++ P+ +T++ L+DG C  GK+  A+ +   M   G   + V+Y 
Sbjct: 67  QLKDAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYT 126

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            ++ GYC   EV +   ++R +   G+ P   +YN +  G  +I  V  AL LF+EM   
Sbjct: 127 SIMEGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCR 186

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS------ 274
            +   T TY++ IDGLCK+  +     L R + ++   L        ID LCKS      
Sbjct: 187 GIVPITVTYSSLIDGLCKSTML--GSLLMRCMLMVN-HLIYPLTVLYIDALCKSNHLDKA 243

Query: 275 ----------GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
                     GRL+ A ++F+ L  +    ++ TYNIMI+GLC +G  D+A         
Sbjct: 244 IALVKKIKDQGRLKNAQDVFQDLLIKGYSLNIQTYNIMINGLCKEGLFDEAE-------- 295

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
                                       LL KM +  ++PDA
Sbjct: 296 ---------------------------ALLSKMDDYGIIPDA 310



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 99/190 (52%)

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           K +   VV YNT+  GL +   V  A +L+ EM  + ++ D +T+N+ I G C  G + +
Sbjct: 11  KLVNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLKD 70

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A  LF  + +      +  +  L+DGLCK G+++ A  +   + +  ++ +VVTY  ++ 
Sbjct: 71  AFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIME 130

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G C   +++K   +F  +    VAPN   +  +I+GF +I   ++ + L  +M  + ++P
Sbjct: 131 GYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIVP 190

Query: 365 DASIVSMVVD 374
                S ++D
Sbjct: 191 ITVTYSSLID 200


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 122/362 (33%), Positives = 192/362 (53%), Gaps = 1/362 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V Y+T+I G   EG +++A+ L   M    + PD+  YN++I  L  A    EA  
Sbjct: 381 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 440

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              E+  +G++P  VTF   +    K GKM EA++  D M+   + PN   Y+ L++G  
Sbjct: 441 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 500

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  +F  + ++G   D  + +  I+G  KN  V+EAL ++ E+  KG+ P V 
Sbjct: 501 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 560

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY++L  G  +  +VE A +L +EM    +A +   YN  +DGLCK+G I  A +LF  +
Sbjct: 561 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 620

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                E D   Y+ +IDG CKS  +  A  LF  +P + +      YN ++HG C +G M
Sbjct: 621 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 680

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +KA +LF +M +   A   + F TLI G+ +  K  +  +L  +M  K++MPD    + V
Sbjct: 681 EKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTV 739

Query: 373 VD 374
           +D
Sbjct: 740 ID 741



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/402 (31%), Positives = 203/402 (50%), Gaps = 35/402 (8%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G I + CKPN+ T+  +I+G C+E  + +A  L  +M+  N+ P  V+Y ++I+GLCH  
Sbjct: 304 GMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCK 363

Query: 66  DWN-----------------------------------EAKRLFFEMMDQGVQPSVVTFN 90
           D +                                   EA+RL   M   GV P +  +N
Sbjct: 364 DLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYN 423

Query: 91  VIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
            I+  L K GKM+EAS  L  +  R ++P+A T+   + G+  TGK+  A + F  M   
Sbjct: 424 AIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDH 483

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G   ++  Y +LING+ K   + EALS++R + + G+ P V T +    GL +  +V+ A
Sbjct: 484 GLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEA 543

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           LK+F E++   +  D  TY++ I G CK G + +A EL   + +     +I  YN L+DG
Sbjct: 544 LKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDG 603

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LCKSG ++ A +LF  +P + L  D VTY+ MI G C    + +A  LF +M    V P+
Sbjct: 604 LCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPH 663

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             ++  L+HG  +     K + L  +M +K      S  +++
Sbjct: 664 SFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLI 705



 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 121/363 (33%), Positives = 200/363 (55%), Gaps = 1/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   Y  +I+G  K G + +A ++F  +    + PDV T ++ IHGL       EA ++
Sbjct: 487 PNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKV 546

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E+ ++G+ P V T++ ++   CK G++++A  L D M  + + PN F Y+ L+DG C 
Sbjct: 547 FSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK 606

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G I RA +LF  M   G + D V+Y+ +I+GYCK++ V EA SL+ EM SKG++P    
Sbjct: 607 SGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFV 666

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +   +E A+ LF EM +   A  T ++NT IDG CK+  I EA +LF+ + 
Sbjct: 667 YNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMI 725

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +   D   Y  +ID  CK+G++E A  LF+ +  R L+ D VTY  +++G    GQ  
Sbjct: 726 AKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSS 785

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +   LF  M    V P+ + +  +I+   + +   +  +L  ++  K ++   +I  +++
Sbjct: 786 EVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLI 845

Query: 374 DLL 376
             L
Sbjct: 846 TAL 848



 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 188/360 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N +TYN +I GLCK G ++KA  +   M      P+  T+  LI G C  ++   A  L 
Sbjct: 278 NLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL 337

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM  + + PS V++  +++ LC    +  A++LL+ M    ++PN   YSTL+ G+   
Sbjct: 338 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASE 397

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+I  A  L   M   G   D   YN +I+   K  ++EEA +   E+  +G+KP  VT+
Sbjct: 398 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 457

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
               LG  +  ++  A K F+EM    +  +   Y   I+G  K G ++EA+ +FR L  
Sbjct: 458 GAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHA 517

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L    D+Q  +  I GL K+GR++ AL++F  L  + LV DV TY+ +I G C  G+++K
Sbjct: 518 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEK 577

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A +L  +M    +APN+ I+  L+ G  +     +  +L   M EK + PD+   S ++D
Sbjct: 578 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 637



 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 199/406 (49%), Gaps = 37/406 (9%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE G+V  PNT TY  I  GLC+   +++AK  F +M+   + PD    ++LI G     
Sbjct: 201 GEKGLV--PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG 258

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
           D +E  R+   M+  G+  +++T+NV++  LCK GKM++A+ +L  M+    +PN+ T+ 
Sbjct: 259 DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFC 318

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L++G+C    + RA EL   ME        VSY  +ING C  K++  A  L  +M   
Sbjct: 319 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 378

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN--------------- 230
           G+KP VV Y+TL +G     ++E A +L + M    VA D   YN               
Sbjct: 379 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 438

Query: 231 --------------------TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
                                FI G  K G + EA + F  +       +   Y  LI+G
Sbjct: 439 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 498

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
             K+G L  AL +FR L    ++ DV T +  IHGL  +G++ +A  +F +++E  + P+
Sbjct: 499 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 558

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           V  + +LI GF +  +  K  EL  +M  K + P+  I + +VD L
Sbjct: 559 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 604



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 193/363 (53%), Gaps = 3/363 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E G+V  P+  TY+++I G CK+G V+KA  L  +M  + I P++  YN+L+ GLC + D
Sbjct: 552 EKGLV--PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGD 609

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
              A++LF  M ++G++P  VT++ ++D  CK+  + EA  L   M  + V+P++F Y+ 
Sbjct: 610 IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNA 669

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ G C  G + +A  LF  M   G     +S+N LI+GYCK+ +++EA  L++EM++K 
Sbjct: 670 LVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQ 728

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I P  VTY T+     +  ++E A  LF+EMQ  ++  DT TY + + G  K G   E  
Sbjct: 729 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVF 788

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            LF  +     + D   Y  +I   CK   L  A +L   +  + ++     ++++I  L
Sbjct: 789 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 848

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C    + +A  L  +M E  + P++    TL+  F    K  +   +   +K   ++PD 
Sbjct: 849 CKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDT 908

Query: 367 SIV 369
           + +
Sbjct: 909 TTL 911



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 175/377 (46%), Gaps = 18/377 (4%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENI------------------NPDVVTYNS 56
           + V ++ +ID   + G +D+A  +F   K ++I                   P+  TY  
Sbjct: 155 SPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTI 214

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
           +  GLC A   NEAK  F EM   G++P     + ++D   + G +DE  R+ D+MV   
Sbjct: 215 ITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCG 274

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           +  N  TY+ L+ G C  GK+ +A E+   M ++GCK +  ++ +LI GYC+   +  AL
Sbjct: 275 IPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRAL 334

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            L  EM  + + P+ V+Y  +  GL     +  A KL E+M    +  +   Y+T I G 
Sbjct: 335 ELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGY 394

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
              G I EA  L   +       DI  YN +I  L K+G++E A      +  R L  D 
Sbjct: 395 ASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDA 454

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           VT+   I G    G+M +A   F +M ++ + PN  ++  LI+G  +     + + +   
Sbjct: 455 VTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRH 514

Query: 357 MKEKKVMPDASIVSMVV 373
           +    V+PD    S  +
Sbjct: 515 LHALGVLPDVQTCSAFI 531



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 168/328 (51%), Gaps = 3/328 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   YN ++DGLCK G + +A+ LF  M  + + PD VTY+++I G C + +  EA  L
Sbjct: 592 PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 651

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM  +GVQP    +N ++   CK G M++A  L   M+Q+       +++TL+DG+C 
Sbjct: 652 FHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCK 710

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           + KI  A +LF  M +     D V+Y  +I+ +CK  ++EEA  L++EM  + +    VT
Sbjct: 711 SCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVT 770

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +L  G  ++ Q      LFE+M    V  D  TY   I   CK   +VEA +L R   
Sbjct: 771 YTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL-RDEV 829

Query: 254 ILKCELDIQA-YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           + K  L     ++ LI  LCK   L  A +L   +    L   +   + ++      G+M
Sbjct: 830 VGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKM 889

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           D+A  +F  ++   + P+    + L++G
Sbjct: 890 DEATRVFEGVKSLGLVPDTTTLIDLVNG 917



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 165/306 (53%), Gaps = 1/306 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P++VTY+T+IDG CK   V +A +LF +M  + + P    YN+L+HG C   D  +A  
Sbjct: 626 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMN 685

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM+ +G   + ++FN ++D  CK+ K+ EAS+L   M+ + + P+  TY+T++D  C
Sbjct: 686 LFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHC 744

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A  LF  M+      D V+Y  L+ GY K  +  E  +L+ +MV+KG+KP  V
Sbjct: 745 KAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEV 804

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  +     +   +  A KL +E+    +    + ++  I  LCK   + EA +L   +
Sbjct: 805 TYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEM 864

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           G L  +  + A + L+    ++G+++ A  +F  +    LV D  T   +++G  ND   
Sbjct: 865 GELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDS 924

Query: 313 DKAHDL 318
           + A +L
Sbjct: 925 EDARNL 930



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 162/369 (43%), Gaps = 45/369 (12%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRL----FFEMMDQGVQPSVVTFNVIMDELCKNGKM 102
           +NPDV      I  + H N   + KRL    ++     GV   + +F+++  +LC +   
Sbjct: 67  LNPDV------IRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELF 120

Query: 103 DEASRLLDLMVQRDVRPNAF-----------------TYSTLMDGFCLTGKINRAEELF- 144
             A+ +L  M++     ++                   +  L+D +   G ++ A  +F 
Sbjct: 121 GLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFF 180

Query: 145 --------------GSMESMGCK---HDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
                          S+ SMG K    +  +Y I+  G C+ K + EA   + EM   G+
Sbjct: 181 VAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGL 240

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP     + L  G      ++  L++ + M    +  +  TYN  I GLCK G + +A E
Sbjct: 241 KPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAE 300

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           + + +  L C+ + + +  LI+G C+   +  ALEL   + +R LV   V+Y  MI+GLC
Sbjct: 301 ILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLC 360

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           +   +  A+ L   M  + + PNV+++ TLI G+    +  +   LL  M    V PD  
Sbjct: 361 HCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIF 420

Query: 368 IVSMVVDLL 376
             + ++  L
Sbjct: 421 CYNAIISCL 429



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 95/169 (56%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +TVTY +++ G  K G   +  ALF +M  + + PD VTY  +I+  C  ++  EA +L 
Sbjct: 767 DTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLR 826

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            E++ +G+       ++++  LCK   + EAS+LLD M +  ++P+    STL+  F   
Sbjct: 827 DEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEA 886

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           GK++ A  +F  ++S+G   D  +   L+NG   + + E+A +L +++V
Sbjct: 887 GKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 196/361 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYN +I   C  G +D A  +F ++  +N  P V+TY  LI         + A +L
Sbjct: 171 PDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKL 230

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+ +G++P  +T+N I+  +CK   +D+A  LL  +  R  +P+  TY+ L+     
Sbjct: 231 LDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLS 290

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK +  E+L   M S+GCK + V+++ILI   C++ +VEEA++L R M  KG+KP    
Sbjct: 291 RGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYC 350

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  G     +++ A +  E M  D    D   YNT + GLC+ G   +A+E+F  L 
Sbjct: 351 YDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLD 410

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            + C  ++ +YN L   L  SG    ALE+   L  + +  D +TYN +I  LC DG +D
Sbjct: 411 EVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVD 470

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A +L +DM+     PNV+ +  ++ G  ++N+ +  IE+L  M EK   P+ +   +++
Sbjct: 471 EAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLI 530

Query: 374 D 374
           +
Sbjct: 531 E 531



 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 176/306 (57%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+T+TYN II G+CKE  VDKA  L   +      PD++TYN L+  L     W+E ++
Sbjct: 240 EPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEK 299

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+  G +P+VVT ++++  LC++GK++EA  LL  M ++ ++P+A+ Y  L+ GFC
Sbjct: 300 LISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFC 359

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ A E    M S GC  D V+YN ++ G C+  + ++AL ++ ++   G  P V 
Sbjct: 360 REGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVS 419

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNTLF  L+       AL++  ++    +  D  TYN+ I  LC++G + EA+EL   +
Sbjct: 420 SYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDM 479

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   ++ +YN ++ GLCK  R   A+E+  ++  +    +  TY ++I G+   G  
Sbjct: 480 QSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLR 539

Query: 313 DKAHDL 318
            +A +L
Sbjct: 540 AEAMEL 545



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 176/349 (50%), Gaps = 3/349 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P  +TY  +I+    +G +D A  L  +M  + + PD +TYN++I G+C     ++A 
Sbjct: 204 CEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAF 263

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   +  +G +P ++T+N+++  L   GK  E  +L+  M+    +PN  T+S L+   
Sbjct: 264 ELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTL 323

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+  A  L  SM+  G K D   Y+ LI G+C+   ++ A      M+S G  P +
Sbjct: 324 CRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDI 383

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YNT+  GL    + + AL++FE++       + S+YNT    L  +G    A+E+   
Sbjct: 384 VNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILK 443

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L     + D   YN LI  LC+ G ++ A+EL   +       +VV+YNI++ GLC   +
Sbjct: 444 LLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNR 503

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL---LHKM 357
            + A ++   M E    PN   ++ LI G       ++ +EL   LH M
Sbjct: 504 ANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGM 552



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 173/341 (50%), Gaps = 1/341 (0%)

Query: 27  CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           C+ G  +++      M  +   PDV+    LI G  ++ +  +A R+  E++++  +P V
Sbjct: 80  CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVM-EILERYGKPDV 138

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
             +N ++    K  +++ A+R+LD M  R   P+  TY+ ++  FC  GK++ A E+F  
Sbjct: 139 FAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEE 198

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           +    C+   ++Y ILI     +  ++ A+ L  EM+SKG++P  +TYN +  G+ +   
Sbjct: 199 LLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMM 258

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           V+ A +L   +       D  TYN  +  L   G   E  +L   +  + C+ ++  ++ 
Sbjct: 259 VDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSI 318

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LI  LC+ G++E A+ L RS+  + L  D   Y+ +I G C +G++D A +    M  + 
Sbjct: 319 LIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDG 378

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             P+++ + T++ G  R  K  + +E+  K+ E    P+ S
Sbjct: 379 CLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVS 419



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 79/245 (32%), Positives = 132/245 (53%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           I + CKPN VT++ +I  LC++G V++A  L   MK + + PD   Y+ LI G C     
Sbjct: 305 ISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRL 364

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           + A      M+  G  P +V +N IM  LC+ GK D+A  + + + +    PN  +Y+TL
Sbjct: 365 DLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTL 424

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
                 +G   RA E+   + + G   D+++YN LI+  C++  V+EA+ L  +M S   
Sbjct: 425 FSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRY 484

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P VV+YN + LGL ++++   A+++   M       + +TY   I+G+  +G   EA+E
Sbjct: 485 RPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAME 544

Query: 248 LFRTL 252
           L  +L
Sbjct: 545 LANSL 549



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 1/250 (0%)

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L++  C  GK N +      M   G   D +    LI G+  ++ + +A  +  E++ + 
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVM-EILERY 133

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            KP V  YN L  G  + +Q+E+A ++ + M+      D  TYN  I   C  G +  A+
Sbjct: 134 GKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           E+F  L    CE  +  Y  LI+     G +++A++L   +  + L  D +TYN +I G+
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C +  +DKA +L   +      P++I +  L+   +   K S+  +L+ +M      P+ 
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNV 313

Query: 367 SIVSMVVDLL 376
              S+++  L
Sbjct: 314 VTHSILIGTL 323



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 1/153 (0%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           V C PN  +YNT+   L   G   +A  + L++  + I+PD +TYNSLI  LC     +E
Sbjct: 412 VGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDE 471

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  L  +M     +P+VV++N+I+  LCK  + ++A  +L  M ++  +PN  TY  L++
Sbjct: 472 AIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIE 531

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
           G   +G    A EL  S+  M    +D S+N L
Sbjct: 532 GIGFSGLRAEAMELANSLHGMNAISED-SFNRL 563


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 122/362 (33%), Positives = 192/362 (53%), Gaps = 1/362 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V Y+T+I G   EG +++A+ L   M    + PD+  YN++I  L  A    EA  
Sbjct: 182 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 241

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              E+  +G++P  VTF   +    K GKM EA++  D M+   + PN   Y+ L++G  
Sbjct: 242 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 301

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  +F  + ++G   D  + +  I+G  KN  V+EAL ++ E+  KG+ P V 
Sbjct: 302 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 361

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY++L  G  +  +VE A +L +EM    +A +   YN  +DGLCK+G I  A +LF  +
Sbjct: 362 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 421

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                E D   Y+ +IDG CKS  +  A  LF  +P + +      YN ++HG C +G M
Sbjct: 422 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 481

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +KA +LF +M +   A   + F TLI G+ +  K  +  +L  +M  K++MPD    + V
Sbjct: 482 EKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTV 540

Query: 373 VD 374
           +D
Sbjct: 541 ID 542



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/402 (31%), Positives = 203/402 (50%), Gaps = 35/402 (8%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G I + CKPN+ T+  +I+G C+E  + +A  L  +M+  N+ P  V+Y ++I+GLCH  
Sbjct: 105 GMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCK 164

Query: 66  DWN-----------------------------------EAKRLFFEMMDQGVQPSVVTFN 90
           D +                                   EA+RL   M   GV P +  +N
Sbjct: 165 DLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYN 224

Query: 91  VIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
            I+  L K GKM+EAS  L  +  R ++P+A T+   + G+  TGK+  A + F  M   
Sbjct: 225 AIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDH 284

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G   ++  Y +LING+ K   + EALS++R + + G+ P V T +    GL +  +V+ A
Sbjct: 285 GLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEA 344

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           LK+F E++   +  D  TY++ I G CK G + +A EL   + +     +I  YN L+DG
Sbjct: 345 LKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDG 404

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LCKSG ++ A +LF  +P + L  D VTY+ MI G C    + +A  LF +M    V P+
Sbjct: 405 LCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPH 464

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             ++  L+HG  +     K + L  +M +K      S  +++
Sbjct: 465 SFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLI 506



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 188/360 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N +TYN +I GLCK G ++KA  +   M      P+  T+  LI G C  ++   A  L 
Sbjct: 79  NLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL 138

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM  + + PS V++  +++ LC    +  A++LL+ M    ++PN   YSTL+ G+   
Sbjct: 139 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASE 198

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+I  A  L   M   G   D   YN +I+   K  ++EEA +   E+  +G+KP  VT+
Sbjct: 199 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 258

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
               LG  +  ++  A K F+EM    +  +   Y   I+G  K G ++EA+ +FR L  
Sbjct: 259 GAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHA 318

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L    D+Q  +  I GL K+GR++ AL++F  L  + LV DV TY+ +I G C  G+++K
Sbjct: 319 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEK 378

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A +L  +M    +APN+ I+  L+ G  +     +  +L   M EK + PD+   S ++D
Sbjct: 379 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 438



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 198/408 (48%), Gaps = 53/408 (12%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   Y  +I+G  K G + +A ++F  +    + PDV T ++ IHGL       EA ++
Sbjct: 288 PNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKV 347

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E+ ++G+ P V T++ ++   CK G++++A  L D M  + + PN F Y+ L+DG C 
Sbjct: 348 FSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK 407

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G I RA +LF  M   G + D V+Y+ +I+GYCK++ V EA SL+ EM SKG++P    
Sbjct: 408 SGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFV 467

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +   +E A+ LF EM +   A  T ++NT IDG CK+  I EA +LF+ + 
Sbjct: 468 YNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMI 526

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV---------------- 297
             +   D   Y  +ID  CK+G++E A  LF+ +  R L+ D V                
Sbjct: 527 AKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDE 586

Query: 298 -TY-----------------------------------NIMIHGLCNDGQMDKAHDLFLD 321
            TY                                   +++I  LC    + +A  L  +
Sbjct: 587 VTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDE 646

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           M E  + P++    TL+  F    K  +   +   +K   ++PD + +
Sbjct: 647 MGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTL 694



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 199/406 (49%), Gaps = 37/406 (9%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE G+V  PNT TY  I  GLC+   +++AK  F +M+   + PD    ++LI G     
Sbjct: 2   GEKGLV--PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG 59

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
           D +E  R+   M+  G+  +++T+NV++  LCK GKM++A+ +L  M+    +PN+ T+ 
Sbjct: 60  DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFC 119

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L++G+C    + RA EL   ME        VSY  +ING C  K++  A  L  +M   
Sbjct: 120 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 179

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN--------------- 230
           G+KP VV Y+TL +G     ++E A +L + M    VA D   YN               
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239

Query: 231 --------------------TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
                                FI G  K G + EA + F  +       +   Y  LI+G
Sbjct: 240 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 299

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
             K+G L  AL +FR L    ++ DV T +  IHGL  +G++ +A  +F +++E  + P+
Sbjct: 300 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 359

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           V  + +LI GF +  +  K  EL  +M  K + P+  I + +VD L
Sbjct: 360 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 405



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 189/395 (47%), Gaps = 54/395 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   YN II  L K G +++A    L+++G  + PD VT+ + I G        EA + 
Sbjct: 218 PDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKY 277

Query: 74  FFEMMDQG-----------------------------------VQPSVVTFNVIMDELCK 98
           F EM+D G                                   V P V T +  +  L K
Sbjct: 278 FDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLK 337

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           NG++ EA ++   + ++ + P+ FTYS+L+ GFC  G++ +A EL   M   G   +   
Sbjct: 338 NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFI 397

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN L++G CK+ +++ A  L+  M  KG++P  VTY+T+  G  +   V  A  LF EM 
Sbjct: 398 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 457

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              V   +  YN  + G CK G + +A+ LFR + + K      ++N LIDG CKS +++
Sbjct: 458 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM-LQKGFATTLSFNTLIDGYCKSCKIQ 516

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +LF+ +  + ++ D VTY  +I   C  G+M++A+ LF +M+E     N+I+     
Sbjct: 517 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQER----NLIV----- 567

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
                      V  L  KM  K V PD     +V+
Sbjct: 568 ---------DTVFALFEKMVAKGVKPDEVTYGLVI 593



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 186/379 (49%), Gaps = 53/379 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T +  I GL K G V +A  +F ++K + + PDV TY+SLI G C   +  +A  L
Sbjct: 323 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL 382

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G+ P++  +N ++D LCK+G +  A +L D M ++ + P++ TYST++DG+C 
Sbjct: 383 HDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCK 442

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +  +  A  LF  M S G +     YN L++G CK  ++E+A++L+REM+ KG   T ++
Sbjct: 443 SENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLS 501

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR--- 250
           +NTL  G  +  +++ A +LF+EM    +  D  TY T ID  CK G + EA  LF+   
Sbjct: 502 FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 561

Query: 251 --------------------------TLGIL---KCELD--IQAY--------------- 264
                                     T G++    C+ D  ++A+               
Sbjct: 562 ERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKG 621

Query: 265 ---NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
              + LI  LCK   L  A +L   +    L   +   + ++      G+MD+A  +F  
Sbjct: 622 TIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEG 681

Query: 322 MEENAVAPNVIIFVTLIHG 340
           ++   + P+    + L++G
Sbjct: 682 VKSLGLVPDTTTLIDLVNG 700



 Score =  170 bits (431), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 159/332 (47%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           M  + + P+  TY  +  GLC A   NEAK  F EM   G++P     + ++D   + G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +DE  R+ D+MV   +  N  TY+ L+ G C  GK+ +A E+   M ++GCK +  ++ +
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LI GYC+   +  AL L  EM  + + P+ V+Y  +  GL     +  A KL E+M    
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           +  +   Y+T I G    G I EA  L   +       DI  YN +I  L K+G++E A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
                +  R L  D VT+   I G    G+M +A   F +M ++ + PN  ++  LI+G 
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            +     + + +   +    V+PD    S  +
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFI 332



 Score =  167 bits (422), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 165/322 (51%), Gaps = 18/322 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   YN ++DGLCK G + +A+ LF  M  + + PD VTY+++I G C + +  EA  L
Sbjct: 393 PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 452

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM  +GVQP    +N ++   CK G M++A  L   M+Q+       +++TL+DG+C 
Sbjct: 453 FHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCK 511

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA-----------------L 176
           + KI  A +LF  M +     D V+Y  +I+ +CK  ++EEA                  
Sbjct: 512 SCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVF 571

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           +L+ +MV+KG+KP  VTY  +     +   +  A KL +E+    +    + ++  I  L
Sbjct: 572 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 631

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           CK   + EA +L   +G L  +  + A + L+    ++G+++ A  +F  +    LV D 
Sbjct: 632 CKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDT 691

Query: 297 VTYNIMIHGLCNDGQMDKAHDL 318
            T   +++G  ND   + A +L
Sbjct: 692 TTLIDLVNGNLNDTDSEDARNL 713



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 152/298 (51%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M ++G+ P+  T+ +I   LC+  +M+EA    + M +  ++P+    S L+DGF   G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           I+    +   M S G   + ++YN+LI+G CK  ++E+A  + + M++ G KP   T+  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G    H +  AL+L +EM++ ++     +Y   I+GLC    +  A +L   +    
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            + ++  Y+ LI G    GR+E A  L   +    +  D+  YN +I  L   G+M++A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
              L+++   + P+ + F   I G+ +  K ++  +   +M +  +MP+  + +++++
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN 298



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 111/230 (48%)

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M   G   +  +Y I+  G C+ K + EA   + EM   G+KP     + L  G      
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           ++  L++ + M    +  +  TYN  I GLCK G + +A E+ + +  L C+ + + +  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LI+G C+   +  ALEL   + +R LV   V+Y  MI+GLC+   +  A+ L   M  + 
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + PNV+++ TLI G+    +  +   LL  M    V PD    + ++  L
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCL 230



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 17/187 (9%)

Query: 14  PNTVTYNTIIDGLCKEG-----------------FVDKAKALFLQMKGENINPDVVTYNS 56
           P+ VTY T+ID  CK G                  VD   ALF +M  + + PD VTY  
Sbjct: 532 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGL 591

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
           +I+  C  ++  EA +L  E++ +G+       ++++  LCK   + EAS+LLD M +  
Sbjct: 592 VIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELG 651

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           ++P+    STL+  F   GK++ A  +F  ++S+G   D  +   L+NG   + + E+A 
Sbjct: 652 LKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDAR 711

Query: 177 SLYREMV 183
           +L +++V
Sbjct: 712 NLIKQLV 718



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 63/118 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY  +I   CKE  + +A  L  ++ G+ +      ++ LI  LC   D  EA +
Sbjct: 583 KPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASK 642

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           L  EM + G++PS+   + ++    + GKMDEA+R+ + +    + P+  T   L++G
Sbjct: 643 LLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 700


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 121/380 (31%), Positives = 200/380 (52%), Gaps = 8/380 (2%)

Query: 5   NGEIGVVCK--------PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNS 56
            GEIG   +        P+ VTYNTI+  LC  G + +A  +  +       PDV+TY  
Sbjct: 193 TGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTI 252

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
           LI   C  +   +A +L  EM D+G +P VVT+NV+++ +CK G++DEA R L+ M    
Sbjct: 253 LIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYG 312

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
            +PN  T++ ++   C TG+   AE+    M   GC    V++NILIN  C+   +  A+
Sbjct: 313 CQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAI 372

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            +  +M   G  P  ++YN L   L +  ++E A++  + M       D  TYNT +  L
Sbjct: 373 DVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTAL 432

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           CK+G +  AVE+   LG   C   +  YN +IDGL K G+ + A++L   +  + L  D+
Sbjct: 433 CKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDI 492

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           +TY+ ++ GL  +G++D+A   F D+EE  V PN I + +++ G  +  +  + I+ L  
Sbjct: 493 ITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAY 552

Query: 357 MKEKKVMPDASIVSMVVDLL 376
           M  +   P  +   ++++ L
Sbjct: 553 MVARGCKPTETSYMILIEGL 572



 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 122/367 (33%), Positives = 192/367 (52%), Gaps = 6/367 (1%)

Query: 10  VVCK---PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           +VC+   P+ +   ++I GLCK G   KA  +   ++     PDV+TYN LI G C   +
Sbjct: 136 MVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGE 195

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
              A +L   M    V P VVT+N I+  LC +GK+ EA  +LD  +QR+  P+  TY+ 
Sbjct: 196 IGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTI 252

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L++  C    + +A +L   M   GCK D V+YN+LING CK   ++EA+     M S G
Sbjct: 253 LIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYG 312

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            +P V+T+N +   +    +   A K   EM R   +    T+N  I+ LC+ G I  A+
Sbjct: 313 CQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAI 372

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           ++   +    C  +  +YN L+  LCK  ++E A+E    +  R    D+VTYN ++  L
Sbjct: 373 DVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTAL 432

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C DG++D A ++   +     +P +I + T+I G  ++ K    I+LL +MK K + PD 
Sbjct: 433 CKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDI 492

Query: 367 SIVSMVV 373
              S +V
Sbjct: 493 ITYSTLV 499



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 194/364 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY  +I+  CKE  V +A  L  +M+ +   PDVVTYN LI+G+C     +EA 
Sbjct: 243 CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAI 302

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R    M   G QP+V+T N+I+  +C  G+  +A + L  M+++   P+  T++ L++  
Sbjct: 303 RFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFL 362

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I RA ++   M   GC  + +SYN L++  CK+K++E A+     MVS+G  P +
Sbjct: 363 CRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDI 422

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL   L +  +V+ A+++  ++     +    TYNT IDGL K G   +A++L   
Sbjct: 423 VTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDE 482

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DI  Y+ L+ GL + G+++ A+  F  L    +  + +TYN ++ GLC   Q
Sbjct: 483 MKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQ 542

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
             +A D    M      P    ++ LI G        + +ELL+++  + V+  +S   +
Sbjct: 543 TVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQV 602

Query: 372 VVDL 375
           VV +
Sbjct: 603 VVKI 606



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 114/239 (47%), Gaps = 6/239 (2%)

Query: 141 EELFGSMESMGCK---HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           EE F  +E M C+    D ++   LI G CK  +  +A  +   +   G  P V+TYN L
Sbjct: 127 EEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVL 186

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G  +  ++  AL+L + M    V+ D  TYNT +  LC +G + EA+E+       +C
Sbjct: 187 ISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQREC 243

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D+  Y  LI+  CK   +  A++L   +  +    DVVTYN++I+G+C +G++D+A  
Sbjct: 244 YPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIR 303

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               M      PNVI    ++       +     + L +M  K   P     +++++ L
Sbjct: 304 FLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFL 362



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 3/198 (1%)

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           +N E+EE      +MV +G  P ++   +L  GL +  +   A ++ E ++      D  
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           TYN  I G CK G I  A++L   + +     D+  YN ++  LC SG+L+ A+E+    
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRMSV---SPDVVTYNTILRTLCDSGKLKEAMEVLDRQ 238

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
            +R    DV+TY I+I   C +  + +A  L  +M +    P+V+ +  LI+G  +  + 
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 298

Query: 348 SKVIELLHKMKEKKVMPD 365
            + I  L+ M      P+
Sbjct: 299 DEAIRFLNHMPSYGCQPN 316


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 195/364 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY  +I+  C E  V +A  L  +M      PDVVTYN L++G+C     +EA 
Sbjct: 12  CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAI 71

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +    M   G QP+V+T N+I+  +C  G+  +A +LL  MV++   P+  T++ L++  
Sbjct: 72  KFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFL 131

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + RA ++   M + GC  + +SYN L++G+CK K+++ A+     MVS+G  P +
Sbjct: 132 CRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDI 191

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNT+   L +  +V+ A++L  ++     +    TYNT IDGL K G   +AVEL   
Sbjct: 192 VTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHE 251

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D+  Y+ LI GL + G++E A++ F  +    +  +  TYN ++ GLC   Q
Sbjct: 252 MRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQ 311

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D+A D    M      P  + +  LI G        + +ELL+++  + V+  +S   +
Sbjct: 312 TDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQV 371

Query: 372 VVDL 375
           VV L
Sbjct: 372 VVRL 375



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 143/266 (53%)

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
           +LD  ++++  P+  TY+ L++  C    + +A +L   M S GCK D V+YN+L+NG C
Sbjct: 3   VLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMC 62

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           K   ++EA+     M S G +P V+T+N +   +    +   A KL  EM R   +    
Sbjct: 63  KEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVV 122

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           T+N  I+ LC+ G +  A+++   +    C  +  +YN L+ G CK  +++ A++    +
Sbjct: 123 TFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIM 182

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
             R    D+VTYN M+  LC DG++D A +L   +     +P +I + T+I G  ++ K 
Sbjct: 183 VSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKT 242

Query: 348 SKVIELLHKMKEKKVMPDASIVSMVV 373
            + +ELLH+M+ K + PD    S ++
Sbjct: 243 DQAVELLHEMRGKGLKPDVITYSSLI 268



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 155/296 (52%), Gaps = 4/296 (1%)

Query: 75  FEMMDQGVQ----PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            E++D+ ++    P V+T+ ++++  C    + +A +LLD M  R  +P+  TY+ L++G
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  G+++ A +   SM S G + + +++NI++   C      +A  L  EMV KG  P+
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVT+N L   L     +  A+ + E+M       ++ +YN  + G CK   +  A++   
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C  DI  YN ++  LCK G+++ A+EL   L  +     ++TYN +I GL   G
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           + D+A +L  +M    + P+VI + +LI G  R  K  + I+  H ++   V P+A
Sbjct: 241 KTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNA 296



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 57/121 (47%)

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
           +C  D+  Y  LI+  C    +  A++L   +  R    DVVTYN++++G+C +G++D+A
Sbjct: 11  ECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEA 70

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
                 M      PNVI    ++       +     +LL +M  K   P     +++++ 
Sbjct: 71  IKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINF 130

Query: 376 L 376
           L
Sbjct: 131 L 131



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 36/74 (48%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G   KPN  TYN+I+ GLCK    D+A      M  +   P  V+Y  LI G+ +     
Sbjct: 289 GFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAK 348

Query: 69  EAKRLFFEMMDQGV 82
           EA  L  E+  +GV
Sbjct: 349 EALELLNELCSRGV 362


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/356 (35%), Positives = 198/356 (55%), Gaps = 2/356 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+  TY T++DGLCKE  +D+A  L  +M+ E   P  VT+N LI+GLC   D     
Sbjct: 219 CEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVT 278

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M  +G  P+ VT+N I++ LC  GK+D+A  LLD MV     PN  TY TL++G 
Sbjct: 279 KLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGL 338

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+      L  S+E  G   ++ +Y+ LI+G  K ++ EEA+ L+++MV KG +P +
Sbjct: 339 VKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNI 398

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V Y+ L  GL    +++ A ++  EM       +  TY++ I G  K G   +A+ +++ 
Sbjct: 399 VVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKE 458

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  +   Y+ LI GLC+ G+L  A+ ++  +  R L  DVV Y+ MIHGLCN G 
Sbjct: 459 MAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGS 518

Query: 312 MDKAHDLFLDM--EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++    LF +M  +E+   P+V+ +  L+    + N  S  I+LL+ M ++   PD
Sbjct: 519 VEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPD 574



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 194/354 (54%), Gaps = 2/354 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +++N +I  +CK G VD+A  +F +M  +   PDV TY +L+ GLC  +  +EA  L
Sbjct: 186 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 245

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G  PS VTFNV+++ LCK G M   ++L+D M  +   PN  TY+T+++G CL
Sbjct: 246 LDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCL 305

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+++A  L   M +  C  +DV+Y  LING  K     + + L   +  +G       
Sbjct: 306 KGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYA 365

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+TL  GLF+  + E A+ L+++M       +   Y+  IDGLC+ G + EA E+   + 
Sbjct: 366 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 425

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  +   Y+ LI G  K+G  + A+ +++ + +   V + + Y+++IHGLC DG++ 
Sbjct: 426 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLR 485

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM--KEKKVMPD 365
           +A  ++  M    + P+V+ + ++IHG          ++L ++M  +E    PD
Sbjct: 486 EAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPD 539



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 188/364 (51%), Gaps = 2/364 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKG--ENINPDVVTYNSLIHGLCHANDWNE 69
           C+    ++N++++ + +EG   +A   +    G   NI+P+V+++N +I  +C     + 
Sbjct: 147 CRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDR 206

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +F EM  Q  +P V T+  +MD LCK  ++DEA  LLD M      P++ T++ L++
Sbjct: 207 AIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLIN 266

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C  G + R  +L  +M   GC  ++V+YN +ING C   ++++A+SL   MV+    P
Sbjct: 267 GLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVP 326

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             VTY TL  GL +  +    + L   ++     A+   Y+T I GL K     EA+ L+
Sbjct: 327 NDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLW 386

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + +    C+ +I  Y+ LIDGLC+ G+L+ A E+   +  +    +  TY+ +I G    
Sbjct: 387 KKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKT 446

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G   KA  ++ +M +N   PN I +  LIHG     K  + + +   M  + + PD    
Sbjct: 447 GNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAY 506

Query: 370 SMVV 373
           S ++
Sbjct: 507 SSMI 510



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 126/250 (50%), Gaps = 23/250 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN V Y+ +IDGLC+EG +D+AK +  +M  +   P+  TY+SLI G     +  +A 
Sbjct: 394 CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAI 453

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R++ EM      P+ + ++V++  LC++GK+ EA  +   M+ R +RP+   YS+++ G 
Sbjct: 454 RVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGL 513

Query: 132 CLTGKINRAEELFGSM--ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           C  G +    +LF  M  +    + D V+YNIL+   CK   +  A+ L   M+ +G  P
Sbjct: 514 CNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNP 573

Query: 190 TVVTYNTLFLGLFE------------------IHQVEH---ALKLFEEMQRDDVAADTST 228
            ++T N     L E                  +H+ +    A K+ E M +  +  + ST
Sbjct: 574 DLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNAST 633

Query: 229 YNTFIDGLCK 238
           +   I  LCK
Sbjct: 634 WERIIPELCK 643



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 23/154 (14%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVTYNSLIHGLCHAN 65
           +G   +P+ V Y+++I GLC  G V+    LF +M  +  +  PDVVTYN L+  LC  N
Sbjct: 495 LGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQN 554

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL------CKNGK--MDE------------- 104
             + A  L   M+D+G  P ++T N+ ++ L       ++G+  +DE             
Sbjct: 555 SISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVG 614

Query: 105 ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           A++++++M+Q+ + PNA T+  ++   C   K+ 
Sbjct: 615 AAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 648


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 187/341 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY T+IDG C++G   KA  LF +M  + I P VV Y  LI GLC  +  +EA+ +
Sbjct: 191 PNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESM 250

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M + G+ P++ T+N +MD  CK   + +A  L   M+   + PN  T+  L+DG C 
Sbjct: 251 FRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCK 310

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           T ++  A +    M S G   +   YN LI+GYCK   + EALSL+ E+    I P V T
Sbjct: 311 TDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFT 370

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  GL  + ++E A  L +EM++     +  TYNT IDG CK G + +A+E+   + 
Sbjct: 371 YSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMT 430

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E +I  ++ LIDG CK+G++E A+ L+  +  + L+ DVV Y  +I G   DG   
Sbjct: 431 EKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTK 490

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           +A  L  +M+E  + PNV     LI G  +  + S  I+L 
Sbjct: 491 EAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 190/363 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P     N ++DGL K+G  D    ++  M     +P+VVTY +LI G C   D+ +A RL
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+++ + P+VV + +++  LC   ++ EA  +   M    + PN +TY+T+MDG+C 
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              + +A EL+  M   G   + V++ ILI+G CK  E+  A     +M S G+ P +  
Sbjct: 276 IAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +   +  AL L  E+++ ++  D  TY+  I GLC    + EA  L + + 
Sbjct: 336 YNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMK 395

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +   YN LIDG CK G +E A+E+   +  + +  +++T++ +I G C  G+M+
Sbjct: 396 KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKME 455

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L+ +M    + P+V+ +  LI G  +     +   L  +M+E  + P+   +S ++
Sbjct: 456 AAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515

Query: 374 DLL 376
           D L
Sbjct: 516 DGL 518



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 194/361 (53%), Gaps = 5/361 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   +  +I    + G V++A  ++ +M   ++ P +   N ++ GL     ++   ++
Sbjct: 126 PNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKV 180

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +M+ +G  P+VVT+  ++D  C+ G   +A RL D M+++ + P    Y+ L+ G C 
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG 240

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +I+ AE +F +M + G   +  +YN +++GYCK   V++AL LY+EM+  G+ P VVT
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVT 300

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  GL +  ++  A K   +M    V  +   YN  IDG CK G + EA+ L   + 
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +   D+  Y+ LI GLC   R+E A  L + + ++  + + VTYN +I G C +G M+
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA ++   M E  + PN+I F TLI G+ +  K    + L  +M  K ++PD    + ++
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480

Query: 374 D 374
           D
Sbjct: 481 D 481



 Score =  193 bits (491), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 109/307 (35%), Positives = 165/307 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  V Y  +I GLC E  + +A+++F  M+   + P++ TYN+++ G C      +A  L
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + EM+  G+ P+VVTF +++D LCK  +M  A + L  M    V PN F Y+ L+DG+C 
Sbjct: 286 YQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A  L   +E      D  +Y+ILI G C    +EEA  L +EM  KG  P  VT
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G  +   +E A+++  +M    +  +  T++T IDG CK G +  A+ L+  + 
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           I     D+ AY  LIDG  K G  + A  L + +    L  +V T + +I GLC DG++ 
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRIS 525

Query: 314 KAHDLFL 320
            A  LFL
Sbjct: 526 DAIKLFL 532



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +T++T+IDG CK G ++ A  L+ +M  + + PDVV Y +LI G     +  EA R
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
           L  EM + G+ P+V T + ++D LCK+G++ +A +L 
Sbjct: 495 LHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 10/121 (8%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM- 78
           N++I+   K G +  A+   L +      P+ VT+  ++    HA    E K+ F  M  
Sbjct: 771 NSLINMYSKCGEIGTARRFSLVL------PNDVTFMGVLMACSHAGLVEEGKQHFRSMKE 824

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           D  ++P +  F  ++D LC+ G + EA    + +++  VRPNA  + TL+    L G  +
Sbjct: 825 DYSLRPRISHFGCMVDLLCRAGLLTEA---YEFILKMPVRPNAVVWRTLLGACSLQGMWD 881

Query: 139 R 139
           +
Sbjct: 882 K 882



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 70/173 (40%), Gaps = 7/173 (4%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M D+    +++++  ++     N + ++A +L   M   DV+P+  T +  +      G 
Sbjct: 688 MFDEIPSKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGA 747

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           ++  E +   +   G   D    N LIN Y K  E+  A           + P  VT+  
Sbjct: 748 LDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRF------SLVLPNDVTFMG 801

Query: 197 LFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           + +       VE   + F  M+ D  +    S +   +D LC+ G + EA E 
Sbjct: 802 VLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEF 854



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 35/185 (18%), Positives = 77/185 (41%), Gaps = 10/185 (5%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N +++ ++I         +KA  LF QM+ +++ PD+VT    +         +  + + 
Sbjct: 696 NLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIH 755

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             +  +G+   +   N +++   K G++  A R         V PN  T+  ++      
Sbjct: 756 AYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRF------SLVLPNDVTFMGVLMACSHA 809

Query: 135 GKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           G +   ++ F SM E    +     +  +++  C+   + EA   Y  ++   ++P  V 
Sbjct: 810 GLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEA---YEFILKMPVRPNAVV 866

Query: 194 YNTLF 198
           + TL 
Sbjct: 867 WRTLL 871


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/356 (35%), Positives = 198/356 (55%), Gaps = 2/356 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+  TY T++DGLCKE  +D+A  L  +M+ E   P  VT+N LI+GLC   D     
Sbjct: 203 CEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVT 262

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M  +G  P+ VT+N I++ LC  GK+D+A  LLD MV     PN  TY TL++G 
Sbjct: 263 KLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGL 322

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+      L  S+E  G   ++ +Y+ LI+G  K ++ EEA+ L+++MV KG +P +
Sbjct: 323 VKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNI 382

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V Y+ L  GL    +++ A ++  EM       +  TY++ I G  K G   +A+ +++ 
Sbjct: 383 VVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKE 442

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  +   Y+ LI GLC+ G+L  A+ ++  +  R L  DVV Y+ MIHGLCN G 
Sbjct: 443 MAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGS 502

Query: 312 MDKAHDLFLDM--EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++    LF +M  +E+   P+V+ +  L+    + N  S  I+LL+ M ++   PD
Sbjct: 503 VEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPD 558



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 199/365 (54%), Gaps = 2/365 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +++N +I  +CK G VD+A  +F +M  +   PDV TY +L+ GLC  +  +EA  L
Sbjct: 170 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 229

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G  PS VTFNV+++ LCK G M   ++L+D M  +   PN  TY+T+++G CL
Sbjct: 230 LDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCL 289

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+++A  L   M +  C  +DV+Y  LING  K     + + L   +  +G       
Sbjct: 290 KGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYA 349

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+TL  GLF+  + E A+ L+++M       +   Y+  IDGLC+ G + EA E+   + 
Sbjct: 350 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 409

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  +   Y+ LI G  K+G  + A+ +++ + +   V + + Y+++IHGLC DG++ 
Sbjct: 410 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLR 469

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM--KEKKVMPDASIVSM 371
           +A  ++  M    + P+V+ + ++IHG          ++L ++M  +E    PD    ++
Sbjct: 470 EAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNI 529

Query: 372 VVDLL 376
           ++  L
Sbjct: 530 LLRAL 534



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 188/364 (51%), Gaps = 2/364 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKG--ENINPDVVTYNSLIHGLCHANDWNE 69
           C+    ++N++++ + +EG   +A   +    G   NI+P+V+++N +I  +C     + 
Sbjct: 131 CRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDR 190

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +F EM  Q  +P V T+  +MD LCK  ++DEA  LLD M      P++ T++ L++
Sbjct: 191 AIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLIN 250

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C  G + R  +L  +M   GC  ++V+YN +ING C   ++++A+SL   MV+    P
Sbjct: 251 GLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVP 310

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             VTY TL  GL +  +    + L   ++     A+   Y+T I GL K     EA+ L+
Sbjct: 311 NDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLW 370

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + +    C+ +I  Y+ LIDGLC+ G+L+ A E+   +  +    +  TY+ +I G    
Sbjct: 371 KKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKT 430

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G   KA  ++ +M +N   PN I +  LIHG     K  + + +   M  + + PD    
Sbjct: 431 GNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAY 490

Query: 370 SMVV 373
           S ++
Sbjct: 491 SSMI 494



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 126/250 (50%), Gaps = 23/250 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN V Y+ +IDGLC+EG +D+AK +  +M  +   P+  TY+SLI G     +  +A 
Sbjct: 378 CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAI 437

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R++ EM      P+ + ++V++  LC++GK+ EA  +   M+ R +RP+   YS+++ G 
Sbjct: 438 RVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGL 497

Query: 132 CLTGKINRAEELFGSM--ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           C  G +    +LF  M  +    + D V+YNIL+   CK   +  A+ L   M+ +G  P
Sbjct: 498 CNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNP 557

Query: 190 TVVTYNTLFLGLFE------------------IHQVEH---ALKLFEEMQRDDVAADTST 228
            ++T N     L E                  +H+ +    A K+ E M +  +  + ST
Sbjct: 558 DLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNAST 617

Query: 229 YNTFIDGLCK 238
           +   I  LCK
Sbjct: 618 WERIIPELCK 627



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 23/154 (14%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVTYNSLIHGLCHAN 65
           +G   +P+ V Y+++I GLC  G V+    LF +M  +  +  PDVVTYN L+  LC  N
Sbjct: 479 LGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQN 538

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL------CKNGK--MDE------------- 104
             + A  L   M+D+G  P ++T N+ ++ L       ++G+  +DE             
Sbjct: 539 SISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVG 598

Query: 105 ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           A++++++M+Q+ + PNA T+  ++   C   K+ 
Sbjct: 599 AAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 632


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 122/323 (37%), Positives = 185/323 (57%), Gaps = 1/323 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G+  +PN V YNTIID LC++G V+ A  +   MK   I PDVVTYNSLI  L H+  W
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             + R+  +MM  G+ P V+TF+ ++D   K G++ EA +  + M+QR V PN  TY++L
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++G C+ G ++ A+++   + S G   + V+YN LINGYCK K V++ + +   M   G+
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
                TYNTL+ G  +  +   A K+   M    V  D  T+N  +DGLC +G I +A+ 
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
               L   K  + I  YN +I GLCK+ ++E A  LF SL  + +  DV+TY  M+ GL 
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLR 475

Query: 308 NDGQMDKAHDLFLDME-ENAVAP 329
                 +AH+L+  M+ E+ + P
Sbjct: 476 RKRLWREAHELYRKMQKEDGLMP 498



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 187/353 (52%), Gaps = 1/353 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT+ ++++G C      +A +L  Q+ G    P+VV YN++I  LC     N A  
Sbjct: 146 EPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALD 205

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M   G++P VVT+N ++  L  +G    ++R+L  M++  + P+  T+S L+D + 
Sbjct: 206 VLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYG 265

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A++ +  M       + V+YN LING C +  ++EA  +   +VSKG  P  V
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  +  +V+  +K+   M RD V  DT TYNT   G C+ G    A ++   +
Sbjct: 326 TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D+  +N L+DGLC  G++  AL     L +   V  ++TYNI+I GLC   ++
Sbjct: 386 VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKV 445

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM-KEKKVMP 364
           + A  LF  +    V+P+VI ++T++ G  R     +  EL  KM KE  +MP
Sbjct: 446 EDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 162/340 (47%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
           A  LF  M   +  P +V ++ L+  +   N +     LF  +   G+   + +F  ++D
Sbjct: 63  ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
             C+  ++  A   L  M++    P+  T+ +L++GFC   +   A  L   +  +G + 
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           + V YN +I+  C+  +V  AL + + M   GI+P VVTYN+L   LF       + ++ 
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
            +M R  ++ D  T++  ID   K G ++EA + +  +       +I  YN LI+GLC  
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G L+ A ++   L  +    + VTYN +I+G C   ++D    +   M  + V  +   +
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            TL  G+ +  K S   ++L +M    V PD    ++++D
Sbjct: 363 NTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLD 402



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 168/353 (47%), Gaps = 8/353 (2%)

Query: 22  IIDGLCKEGFVDK--------AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           I+  L  +GF+ +          AL L++           Y   +    H+  +N+A  L
Sbjct: 7   IVIALTAKGFLHRHLLEKGNLVTALSLRICNSRAFSGRSDYRERLRSGLHSIKFNDALTL 66

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M +    PS+V F+ ++  + K  K +    L   +    +  + ++++TL+D FC 
Sbjct: 67  FCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCR 126

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +++ A    G M  +G +   V++  L+NG+C      EA+SL  ++V  G +P VV 
Sbjct: 127 CARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVI 186

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+   L E  QV  AL + + M++  +  D  TYN+ I  L  +G    +  +   + 
Sbjct: 187 YNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM 246

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +    D+  ++ LID   K G+L  A + +  + +R +  ++VTYN +I+GLC  G +D
Sbjct: 247 RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLD 306

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +A  +   +      PN + + TLI+G+ +  +    +++L  M    V  D 
Sbjct: 307 EAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 194/352 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+I     +G +++A  L   M G+  +P V TYN++I+GLC    +  AK +
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+  G+ P   T+  ++ E CK G + E  ++   M  RDV P+   +S++M  F  
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G +++A   F S++  G   D+V Y ILI GYC+   +  A++L  EM+ +G    VVT
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+  GL +   +  A KLF EM    +  D+ T    IDG CK G +  A+ELF+ + 
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +  LD+  YN L+DG  K G ++ A E++  +  + ++   ++Y+I+++ LC+ G + 
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLA 567

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A  ++ +M    + P V+I  ++I G+ R    S     L KM  +  +PD
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD 619



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 194/398 (48%), Gaps = 37/398 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TYNT+I+GLCK G  ++AK +F +M    ++PD  TY SL+   C   D  E +++
Sbjct: 303 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKV 362

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M  + V P +V F+ +M    ++G +D+A    + + +  + P+   Y+ L+ G+C 
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYN--------------------------------- 160
            G I+ A  L   M   GC  D V+YN                                 
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482

Query: 161 --ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
             ILI+G+CK   ++ A+ L+++M  K I+  VVTYNTL  G  ++  ++ A +++ +M 
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
             ++     +Y+  ++ LC  G++ EA  ++  +     +  +   N +I G C+SG   
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 602

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE--NAVAPNVIIFVT 336
                   +     V D ++YN +I+G   +  M KA  L   MEE    + P+V  + +
Sbjct: 603 DGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           ++HGF R N+  +   +L KM E+ V PD S  + +++
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 178/359 (49%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T N +++ LCK+G ++K      Q++ + + PD+VTYN+LI          EA  L 
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M  +G  P V T+N +++ LCK+GK + A  +   M++  + P++ TY +L+   C  
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +   E++F  M S     D V ++ +++ + ++  +++AL  +  +   G+ P  V Y
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  G      +  A+ L  EM +   A D  TYNT + GLCK   + EA +LF  +  
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D      LIDG CK G L+ A+ELF+ +  + +  DVVTYN ++ G    G +D 
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDT 533

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A +++ DM    + P  I +  L++        ++   +  +M  K + P   I + ++
Sbjct: 534 AKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 176/357 (49%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N +I  L + G+V+ A  ++ ++    +  +V T N +++ LC      +      ++ +
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
           +GV P +VT+N ++      G M+EA  L++ M  +   P  +TY+T+++G C  GK  R
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A+E+F  M   G   D  +Y  L+   CK  +V E   ++ +M S+ + P +V ++++  
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
                  ++ AL  F  ++   +  D   Y   I G C+ G I  A+ L   +    C +
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           D+  YN ++ GLCK   L  A +LF  +  R L  D  T  I+I G C  G +  A +LF
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             M+E  +  +V+ + TL+ GF ++       E+   M  K+++P     S++V+ L
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 177/354 (50%), Gaps = 2/354 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +++++    + G +DKA   F  +K   + PD V Y  LI G C     + A  L
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+ QG    VVT+N I+  LCK   + EA +L + M +R + P+++T + L+DG C 
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A ELF  M+    + D V+YN L++G+ K  +++ A  ++ +MVSK I PT ++
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L   L     +  A ++++EM   ++       N+ I G C++G   +       + 
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV--LVADVVTYNIMIHGLCNDGQ 311
                 D  +YN LI G  +   +  A  L + +      LV DV TYN ++HG C   Q
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           M +A  +   M E  V P+   +  +I+GFV  +  ++   +  +M ++   PD
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 179/364 (49%), Gaps = 2/364 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE-A 70
           C  N   ++ +I    +   + +A   F  ++ +     +   N+LI  L     W E A
Sbjct: 161 CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIG-WVELA 219

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             ++ E+   GV  +V T N++++ LCK+GKM++    L  + ++ V P+  TY+TL+  
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G +  A EL  +M   G      +YN +ING CK+ + E A  ++ EM+  G+ P 
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             TY +L +   +   V    K+F +M+  DV  D   +++ +    ++G + +A+  F 
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
           ++       D   Y  LI G C+ G + +A+ L   + ++    DVVTYN ++HGLC   
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            + +A  LF +M E A+ P+      LI G  ++      +EL  KMKEK++  D    +
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519

Query: 371 MVVD 374
            ++D
Sbjct: 520 TLLD 523



 Score =  144 bits (363), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 136/286 (47%), Gaps = 2/286 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  + VTYNTI+ GLCK   + +A  LF +M    + PD  T   LI G C   +   A 
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAM 500

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF +M ++ ++  VVT+N ++D   K G +D A  +   MV +++ P   +YS L++  
Sbjct: 501 ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A  ++  M S   K   +  N +I GYC++    +  S   +M+S+G  P  
Sbjct: 561 CSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDC 620

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDD--VAADTSTYNTFIDGLCKNGYIVEAVELF 249
           ++YNTL  G      +  A  L ++M+ +   +  D  TYN+ + G C+   + EA  + 
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL 680

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           R +       D   Y C+I+G      L  A  +   + +R    D
Sbjct: 681 RKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 2/146 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  +  N++I G C+ G     ++   +M  E   PD ++YN+LI+G     + ++A  
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641

Query: 73  LFFEMMDQ--GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           L  +M ++  G+ P V T+N I+   C+  +M EA  +L  M++R V P+  TY+ +++G
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701

Query: 131 FCLTGKINRAEELFGSMESMGCKHDD 156
           F     +  A  +   M   G   DD
Sbjct: 702 FVSQDNLTEAFRIHDEMLQRGFSPDD 727


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 194/352 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+I     +G +++A  L   M  +  +P V TYN++I+GLC    +  AK +
Sbjct: 258 PDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEV 317

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+  G+ P   T+  ++ E CK G   E   +   M  RDV P+   +S++M  F  
Sbjct: 318 FAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTR 377

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G +++A   F S++  G   D+V Y ILI GYC+   + EA++L  EM+ +G    VVT
Sbjct: 378 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVT 437

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+  GL +   +  A KLF EM    +  D+ T    IDG CK G +  A+ELF+ + 
Sbjct: 438 YNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMK 497

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             + +LD+  YN L+DG  K G ++ A E++  +  + ++   ++++I+++ LC+ G + 
Sbjct: 498 EKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLS 557

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A  ++ +M   ++ P V+I  ++I G+ R    S     L KM  +  +PD
Sbjct: 558 EAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPD 609



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 191/398 (47%), Gaps = 37/398 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TYNT+I+GLCK G  ++AK +F +M    ++PD  TY SL+   C   D  E + +
Sbjct: 293 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENI 352

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M  + V P +V F+ +M    ++G +D+A    + + +  + P+   Y+ L+ G+C 
Sbjct: 353 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 412

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT--- 190
            G I+ A  L   M   GC  D V+YN +++G CK K + EA  L+ EM  +G+ P    
Sbjct: 413 KGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYT 472

Query: 191 --------------------------------VVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
                                           VVTYNTL  G  ++  ++ A +++ +M 
Sbjct: 473 LTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 532

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
             ++     +++  ++ LC  G++ EA  ++  +     +  +   N +I G C+SG   
Sbjct: 533 SKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNAS 592

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN--AVAPNVIIFVT 336
                   +     V D ++YN +I+G   +  M KA  L   MEE    + P+V  + +
Sbjct: 593 DGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNS 652

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           ++HGF R N+  +   +L KM E+ V PD S  + +++
Sbjct: 653 ILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLIN 690



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 184/355 (51%), Gaps = 4/355 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V +++++    + G +DKA   F  +K   + PD V Y  LI G C     +EA  L
Sbjct: 363 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNL 422

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+ QG    VVT+N I+  LCK   + EA +L + M +R + P+++T + L+DG C 
Sbjct: 423 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCK 482

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A ELF  M+    K D V+YN L++G+ K  +++ A  ++ +MVSK I PT ++
Sbjct: 483 LGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 542

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           ++ L   L     +  A ++++EM    +       N+ I G C++G   +  E+F    
Sbjct: 543 FSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDG-EIFLEKM 601

Query: 254 ILKCEL-DIQAYNCLIDGLCKSGRLEIALELFRSLPRRV--LVADVVTYNIMIHGLCNDG 310
           I +  + D  +YN LI G  K   +  A  L + +  +   LV DV TYN ++HG C + 
Sbjct: 602 ISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCREN 661

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           QM +A  +   M E  V P+   + +LI+GFV  +  ++      +M ++   PD
Sbjct: 662 QMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 176/357 (49%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N +I  L + G+V+ A  ++ ++    +  +V T N +++ LC      +      E+ +
Sbjct: 194 NALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQE 253

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
           +GV P +VT+N ++      G M+EA  L+  M  +   P  +TY+T+++G C  GK  R
Sbjct: 254 KGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYER 313

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A+E+F  M   G   D  +Y  L+   CK  +  E  +++ +M S+ + P +V ++++  
Sbjct: 314 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMS 373

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
                  ++ AL  F  ++   +  D   Y   I G C+ G I EA+ L   +    C +
Sbjct: 374 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAM 433

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           D+  YN ++ GLCK   L  A +LF  +  R L  D  T  I+I G C  G +  A +LF
Sbjct: 434 DVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELF 493

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             M+E  +  +V+ + TL+ GF ++       E+   M  K+++P     S++V+ L
Sbjct: 494 KKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNAL 550



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 177/364 (48%), Gaps = 2/364 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE-A 70
           C  N   ++ +I    +   + +A   F  ++ +     +   N+LI  L     W E A
Sbjct: 151 CGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIG-WVELA 209

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            R++ E+   GV  +V T N++++ LCK+GKM++    L  + ++ V P+  TY+TL+  
Sbjct: 210 WRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISA 269

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G +  A EL  +M S G      +YN +ING CK+ + E A  ++ EM+  G+ P 
Sbjct: 270 YSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 329

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             TY +L +   +         +F +M+  DV  D   +++ +    ++G + +A+  F 
Sbjct: 330 STTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 389

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
           ++       D   Y  LI G C+ G +  A+ L   + ++    DVVTYN ++HGLC   
Sbjct: 390 SVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 449

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            + +A  LF +M E  + P+      LI G  ++      +EL  KMKEK++  D    +
Sbjct: 450 MLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYN 509

Query: 371 MVVD 374
            ++D
Sbjct: 510 TLLD 513



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 135/286 (47%), Gaps = 2/286 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  + VTYNTI+ GLCK   + +A  LF +M    + PD  T   LI G C   +   A 
Sbjct: 431 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAM 490

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF +M ++ ++  VVT+N ++D   K G +D A  +   MV +++ P   ++S L++  
Sbjct: 491 ELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNAL 550

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G ++ A  ++  M S   K   +  N +I GYC++    +      +M+S+G  P  
Sbjct: 551 CSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDC 610

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQ--RDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           ++YNTL  G  +   +  A  L ++M+  +  +  D  TYN+ + G C+   + EA  + 
Sbjct: 611 ISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVL 670

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           R +       D   Y  LI+G      L  A      + +R    D
Sbjct: 671 RKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 2/146 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  +  N++I G C+ G     +    +M  E   PD ++YN+LI+G     + ++A  
Sbjct: 572 KPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFG 631

Query: 73  LFFEMMDQ--GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           L  +M ++  G+ P V T+N I+   C+  +M EA  +L  M++R V P+  TY++L++G
Sbjct: 632 LVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLING 691

Query: 131 FCLTGKINRAEELFGSMESMGCKHDD 156
           F     +  A      M   G   DD
Sbjct: 692 FVSQDNLTEAFRFHDEMLQRGFSPDD 717


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 119/318 (37%), Positives = 184/318 (57%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G+  +PN V YNTIID LC+   VD A  +   M+   I PDV+TYNSLI  L H+  W
Sbjct: 170 VGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKW 229

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             + R+  +MM  G+ P V+TF+ ++D   K G++ EA +  D M+QR V PN  TY++L
Sbjct: 230 GVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSL 289

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++G C+ G ++ A+++   M S G   + V+YN L+NGYCK+K V++A+ +   M   G+
Sbjct: 290 INGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGV 349

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
                TYNTL+ G  +  Q   A K+   M    V  D  T+N  +DGLC++G I +A+ 
Sbjct: 350 DGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALV 409

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
               L   +  + I  YN +I G+CK+ ++E A  LF SL  + +  DV+TY  M+ GL 
Sbjct: 410 KLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLR 469

Query: 308 NDGQMDKAHDLFLDMEEN 325
                 +AH+L+  M+++
Sbjct: 470 RKRLWLEAHELYRKMKKD 487



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 190/353 (53%), Gaps = 1/353 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT+ ++++G C    + +A +L  Q+ G    P+VV YN++I  LC     + A  
Sbjct: 140 EPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALD 199

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M   G++P V+T+N ++  L  +GK   ++R+L  M++  + P+  T+S ++D F 
Sbjct: 200 VLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFG 259

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A++ +  M       + V+YN LING C +  ++EA  +   MVSKG  P  V
Sbjct: 260 KEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAV 319

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  +  +V+ A+K+   M  D V  DT TYNT   G C+ G    A ++   +
Sbjct: 320 TYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARM 379

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  DI  +N L+DGLC+ G++E AL     L +   V  ++TYNI+I G+C   ++
Sbjct: 380 VSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKV 439

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM-KEKKVMP 364
           + A  LF  +    V+P+VI + T++ G  R     +  EL  KM K+  +MP
Sbjct: 440 EDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKDDGLMP 492



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 168/342 (49%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
           + A  LF  M      P +V ++ L+  +     +     LF  +   G+   + +F+ +
Sbjct: 55  NDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTL 114

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           +D  C+  ++  A   L  M++    P+  T+ +L++GFC   +I  A  L   +  +G 
Sbjct: 115 IDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGY 174

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
           + + V YN +I+  C+N++V+ AL +   M   GI+P V+TYN+L   LF   +   + +
Sbjct: 175 EPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSAR 234

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           +  +M R  +  D  T++  ID   K G ++EA + +  +     + +I  YN LI+GLC
Sbjct: 235 ILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLC 294

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
             G L+ A ++   +  +    + VTYN +++G C   ++D A  +   M  + V  +  
Sbjct: 295 IHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTF 354

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            + TL  G+ +  + +   ++L +M    V+PD    +M++D
Sbjct: 355 TYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLD 396



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 174/350 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V ++ ++  + K    +   +LF  ++   I+ D+ ++++LI   C  +  + A   
Sbjct: 71  PSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSC 130

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +MM  G +PS+VTF  +++  C   ++ EA  L+D +V     PN   Y+T++D  C 
Sbjct: 131 LGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 190

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +++ A ++   ME MG + D ++YN LI     + +   +  +  +M+  GI P V+T
Sbjct: 191 NRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVIT 250

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           ++ +     +  Q+  A K ++EM +  V  +  TYN+ I+GLC +G + EA ++   + 
Sbjct: 251 FSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMV 310

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +   YN L++G CKS R++ A+++   +    +  D  TYN +  G C  GQ +
Sbjct: 311 SKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFN 370

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            A  +   M    V P++  F  L+ G     K  K +  L  +++ + +
Sbjct: 371 AAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETV 420



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 157/313 (50%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           Y   +    H+  +N+A  LF +M +    PS+V F+ ++  + K  K +    L   + 
Sbjct: 41  YRERLRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIE 100

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
              +  + +++STL+D FC   +++ A    G M  +G +   V++  L+NG+C    ++
Sbjct: 101 ILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQ 160

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           EA+SL  ++V  G +P VV YNT+   L E  QV+ AL +   M++  +  D  TYN+ I
Sbjct: 161 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLI 220

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
             L  +G    +  +   +  +    D+  ++ +ID   K G+L  A + +  + +R + 
Sbjct: 221 TRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVD 280

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            ++VTYN +I+GLC  G +D+A  +   M      PN + + TL++G+ +  +    +++
Sbjct: 281 PNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKI 340

Query: 354 LHKMKEKKVMPDA 366
           L  M    V  D 
Sbjct: 341 LCVMSHDGVDGDT 353



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 137/274 (50%)

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K ++A  L   M +    P+   +S L+       K      LF  +E +G  HD  S++
Sbjct: 53  KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFS 112

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            LI+ +C+   +  ALS   +M+  G +P++VT+ +L  G   +++++ A+ L +++   
Sbjct: 113 TLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGL 172

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
               +   YNT ID LC+N  +  A+++   +  +    D+  YN LI  L  SG+  ++
Sbjct: 173 GYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVS 232

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
             +   + R  +  DV+T++ MI     +GQ+ +A   + +M + +V PN++ + +LI+G
Sbjct: 233 ARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLING 292

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
                   +  ++L+ M  K   P+A   + +V+
Sbjct: 293 LCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVN 326



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 97/203 (47%)

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           +AL+L+ +M      P++V ++ L + + ++ + E  + LF  ++   ++ D  +++T I
Sbjct: 56  DALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLI 115

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
           D  C+   +  A+     +  L  E  I  +  L++G C   R++ A+ L   +      
Sbjct: 116 DCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYE 175

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            +VV YN +I  LC + Q+D A D+   ME+  + P+VI + +LI       K      +
Sbjct: 176 PNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARI 235

Query: 354 LHKMKEKKVMPDASIVSMVVDLL 376
           L  M    + PD    S ++D+ 
Sbjct: 236 LSDMMRMGIHPDVITFSAMIDVF 258



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 14/202 (6%)

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFE------------IHQVEH--ALKLFEEMQRDDVA 223
           L+R ++ KG   T ++ N    G F             +H ++   AL LF +M      
Sbjct: 11  LHRHLLEKGNPVTALSLNVCNFGAFSGGSDYRERLRSGLHSIKFNDALTLFCDMAESRPL 70

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL 283
                ++  +  + K       + LFR + IL    D+ +++ LID  C+  RL +AL  
Sbjct: 71  PSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSC 130

Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
              + +      +VT+  +++G C+  ++ +A  L   +      PNV+I+ T+I     
Sbjct: 131 LGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 190

Query: 344 INKPSKVIELLHKMKEKKVMPD 365
             +    +++L+ M++  + PD
Sbjct: 191 NRQVDTALDVLNHMEKMGIRPD 212


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 114/361 (31%), Positives = 197/361 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNTI+  LC  G + +A  +  +   +   PDV+TY  LI   C  +   +A +L
Sbjct: 157 PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKL 216

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM ++G +P VVT+NV+++ +CK G++DEA + L+ M     +PN  T++ ++   C 
Sbjct: 217 LDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCS 276

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG+   AE+L   M   GC    V++NILIN  C+   +  A+ +  +M   G  P  ++
Sbjct: 277 TGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS 336

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +  +++ A++  + M       D  TYNT +  LCK+G +  AVE+   L 
Sbjct: 337 YNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS 396

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C   +  YN +IDGL K G+ E A++L   + R+ L  D++TY+ ++ GL  +G++D
Sbjct: 397 SKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVD 456

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A   F D+E   + PN I + +++ G  +  +  + I+ L  M  K+  P  +  ++++
Sbjct: 457 EAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILI 516

Query: 374 D 374
           +
Sbjct: 517 E 517



 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 107/307 (34%), Positives = 178/307 (57%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTYN +I+G+CKEG +D+A      M      P+V+T+N ++  +C    W +A++
Sbjct: 226 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEK 285

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ +G  PSVVTFN++++ LC+ G +  A  +L+ M      PN+ +Y+ L+ GFC
Sbjct: 286 LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFC 345

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K++RA E    M S GC  D V+YN L+   CK+ +V+ A+ +  ++ SKG  P ++
Sbjct: 346 KEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLI 405

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNT+  GL ++ + E A+KL +EM+R  +  D  TY++ + GL + G + EA++ F  L
Sbjct: 406 TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 465

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             L    +   YN ++ GLCKS + + A++    +  +       TY I+I G+  +G  
Sbjct: 466 EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLA 525

Query: 313 DKAHDLF 319
            +A DL 
Sbjct: 526 KEALDLL 532



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 193/363 (53%), Gaps = 3/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +   ++I G C+ G   KA  +   ++     PDV+TYN LI G C + + + A ++
Sbjct: 90  PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 149

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M    V P VVT+N I+  LC +GK+ +A  +LD  +Q++  P+  TY+ L++  C 
Sbjct: 150 LDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCK 206

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              + +A +L   M + G K D V+YN+LING CK   ++EA+     M S G +P V+T
Sbjct: 207 ESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVIT 266

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N +   +    +   A KL  +M R   +    T+N  I+ LC+ G +  A+++   + 
Sbjct: 267 HNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMP 326

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +  C  +  +YN L+ G CK  +++ A+E    +  R    D+VTYN ++  LC DG++D
Sbjct: 327 MHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD 386

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A ++   +     +P +I + T+I G  ++ K  + I+LL +M+ K + PD    S +V
Sbjct: 387 VAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 446

Query: 374 DLL 376
             L
Sbjct: 447 SGL 449



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 195/364 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY  +I+  CKE  V +A  L  +M+ +   PDVVTYN LI+G+C     +EA 
Sbjct: 190 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAI 249

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +    M   G QP+V+T N+I+  +C  G+  +A +LL  M+++   P+  T++ L++  
Sbjct: 250 KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL 309

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + RA ++   M   GC  + +SYN L++G+CK K+++ A+     MVS+G  P +
Sbjct: 310 CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDI 369

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL   L +  +V+ A+++  ++     +    TYNT IDGL K G    A++L   
Sbjct: 370 VTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDE 429

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DI  Y+ L+ GL + G+++ A++ F  L    +  + +TYN ++ GLC   Q
Sbjct: 430 MRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQ 489

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D+A D    M      P    +  LI G        + ++LL+++  + ++  +S   +
Sbjct: 490 TDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQV 549

Query: 372 VVDL 375
            V +
Sbjct: 550 AVKM 553



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 148/274 (54%), Gaps = 3/274 (1%)

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           +  L +NG++++  + L+ MV R   P+    ++L+ GFC  GK  +A  +   +E  G 
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
             D ++YN+LI+GYCK+ E++ AL +   M    + P VVTYNT+   L +  +++ A++
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 180

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           + +   + +   D  TY   I+  CK   + +A++L   +     + D+  YN LI+G+C
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           K GRL+ A++   ++P      +V+T+NI++  +C+ G+   A  L  DM     +P+V+
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 300

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            F  LI+   R     + I++L KM      P++
Sbjct: 301 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 334



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 153/293 (52%), Gaps = 4/293 (1%)

Query: 74  FFE-MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           F E M+ +G  P ++    ++   C+ GK  +A+ +++++ Q    P+  TY+ L+ G+C
Sbjct: 79  FLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYC 138

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G+I+ A ++   ++ M    D V+YN ++   C + ++++A+ +    + K   P V+
Sbjct: 139 KSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVI 195

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L     +   V  A+KL +EM+      D  TYN  I+G+CK G + EA++    +
Sbjct: 196 TYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 255

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C+ ++  +N ++  +C +GR   A +L   + R+     VVT+NI+I+ LC  G +
Sbjct: 256 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLL 315

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +A D+   M  +   PN + +  L+HGF +  K  + IE L  M  +   PD
Sbjct: 316 GRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPD 368



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 119/239 (49%), Gaps = 6/239 (2%)

Query: 141 EELFGSMESM---GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           E+ F  +ESM   G   D +    LI G+C+  + ++A  +   +   G  P V+TYN L
Sbjct: 74  EDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVL 133

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G  +  ++++AL++ + M   +VA D  TYNT +  LC +G + +A+E+       +C
Sbjct: 134 ISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKEC 190

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D+  Y  LI+  CK   +  A++L   +  +    DVVTYN++I+G+C +G++D+A  
Sbjct: 191 YPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIK 250

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              +M      PNVI    ++       +     +LL  M  K   P     +++++ L
Sbjct: 251 FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL 309



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G+  +PN +TYN+I+ GLCK    D+A      M  +   P   TY  LI G+ +     
Sbjct: 467 GLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAK 526

Query: 69  EAKRLFFEMMDQGV 82
           EA  L  E+  +G+
Sbjct: 527 EALDLLNELCSRGL 540


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 206/406 (50%), Gaps = 35/406 (8%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA- 64
            E G VC P+ V Y T+ID   KEG V+KA  LF +M    I PD+VTY+S++H LC A 
Sbjct: 213 AEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKAR 272

Query: 65  ----------------------------------NDWNEAKRLFFEMMDQGVQPSVVTFN 90
                                               W EA R+F EM    + P VVT N
Sbjct: 273 AMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLN 332

Query: 91  VIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
           ++M  LCK GK+ EA  + D M  +   P+ F+Y  +++G+   G +    +LF  M   
Sbjct: 333 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGD 392

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G   D  ++++LI  Y     +++A+ ++ EM   G+KP VVTY T+   L  I +++ A
Sbjct: 393 GIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDA 452

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           ++ F +M    VA D   Y+  I G C +G +++A EL   +      LDI  ++ +I+ 
Sbjct: 453 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINN 512

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LCK GR+  A  +F          D V Y++++ G C  G+M+KA  +F  M    + PN
Sbjct: 513 LCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 572

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           V+++ TL++G+ +I +  + + L  +M +K + P   + ++++D L
Sbjct: 573 VVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 618



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 114/286 (39%), Positives = 166/286 (58%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY T+I  LC+ G +D A   F QM  + + PD   Y+ LI G C      +AK 
Sbjct: 430 KPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKE 489

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  E+M+ G++  +V F+ I++ LCK G++ +A  + DL V     P+A  YS LMDG+C
Sbjct: 490 LILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYC 549

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK+ +A  +F +M S G + + V Y  L+NGYCK   ++E LSL+REM+ KGIKP+ +
Sbjct: 550 LVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTI 609

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN +  GLF   +   A   F EM    +A +  TYN  + G  KN    EA+ LF+ L
Sbjct: 610 LYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKEL 669

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
             +  ++DI   N +I G+ ++ R+E A +LF S+ R  LV  VVT
Sbjct: 670 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 185/358 (51%), Gaps = 3/358 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           V  P + TY  ++D   +    + A A F Q+    +  D++  N L+ G C A   +EA
Sbjct: 110 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEA 169

Query: 71  KRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV--RPNAFTYSTL 127
             +      + G  P V ++++++  LC  GK  +A  LL +M +      P+   Y+T+
Sbjct: 170 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTV 229

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D F   G +N+A +LF  M   G   D V+Y+ +++  CK + + +A +  R+MV+KG+
Sbjct: 230 IDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGV 289

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P   TYN L  G     Q + A+++F+EM+R  +  D  T N  +  LCK G I EA +
Sbjct: 290 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARD 349

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +F T+ +     D+ +Y  +++G    G L    +LF  +    +  D+ T++++I    
Sbjct: 350 VFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYA 409

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           N G +DKA  +F +M ++ V P+V+ + T+I    RI K    +E  ++M ++ V PD
Sbjct: 410 NCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 467



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 178/351 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +Y  +++G   +G +     LF  M G+ I PD+ T++ LI    +    ++A  +
Sbjct: 361 PDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMII 420

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM D GV+P VVT+  ++  LC+ GKMD+A    + M+ + V P+ + Y  L+ GFC 
Sbjct: 421 FNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCT 480

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G + +A+EL   + + G + D V ++ +IN  CK   + +A +++   V+ G  P  V 
Sbjct: 481 HGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVV 540

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  G   + ++E AL++F+ M    +  +   Y T ++G CK G I E + LFR + 
Sbjct: 541 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREML 600

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +     YN +IDGL  +GR   A   F  +    +  +  TYNI++ G   +   D
Sbjct: 601 QKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFD 660

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           +A  LF ++    V  ++I   T+I G  +  +  +  +L   +    ++P
Sbjct: 661 EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 711



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 178/352 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT N ++  LCK G + +A+ +F  M  +  NPDV +Y  +++G        +   L
Sbjct: 326 PDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDL 385

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+  G+ P + TF+V++      G +D+A  + + M    V+P+  TY+T++   C 
Sbjct: 386 FDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCR 445

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A E F  M   G   D  +Y+ LI G+C +  + +A  L  E+++ G++  +V 
Sbjct: 446 IGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVF 505

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           ++++   L ++ ++  A  +F+         D   Y+  +DG C  G + +A+ +F  + 
Sbjct: 506 FSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMV 565

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E ++  Y  L++G CK GR++  L LFR + ++ +    + YNI+I GL   G+  
Sbjct: 566 SAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTV 625

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            A   F +M E+ +A N   +  ++ GF +     + I L  +++   V  D
Sbjct: 626 PAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKID 677



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 44/300 (14%)

Query: 115 RDVRPNAFTYSTLMD-----------------------------------GFCLTGKINR 139
           R + P + TY+ LMD                                   GFC   + + 
Sbjct: 109 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 168

Query: 140 AEE-LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI--KPTVVTYNT 196
           A + L      +GC  D  SY+IL+   C   +  +A  L R M   G    P VV Y T
Sbjct: 169 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTT 228

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---G 253
           +    F+   V  A  LF+EM +  +  D  TY++ +  LCK   + +A    R +   G
Sbjct: 229 VIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKG 288

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +L    D   YN LI G   +G+ + A+ +F+ + R  ++ DVVT N+++  LC  G++ 
Sbjct: 289 VLP---DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIK 345

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A D+F  M      P+V  +  +++G+        + +L   M    + PD    S+++
Sbjct: 346 EARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLI 405


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 116/333 (34%), Positives = 197/333 (59%), Gaps = 2/333 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN-EA 70
           C+ N V+Y TII GLC+ G +D+  +LF +M+ ++  P V TY  +IH L   ND N E 
Sbjct: 280 CRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHAL-FGNDRNLEG 338

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             LF EM ++  +P+V T+ V++D +CK  K+DE+ R+L+ M+++ + P+  TY+ L+ G
Sbjct: 339 MDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRG 398

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +C  G+I  A E+ G MES  C+ ++ +YN LI G+ K K V +A++L  +M+   + P+
Sbjct: 399 YCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPS 458

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           +VTYN+L     +    + A KL + ++ + +  D  TY+ FID LCK+  + EA +LF 
Sbjct: 459 LVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFN 518

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
           +L     + +   Y  LIDG CK+G+++ A+ L   +     + +  TYN +I+G+C +G
Sbjct: 519 SLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEG 578

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           ++ +   +  +M +  V P V  +  LI   +R
Sbjct: 579 KVQEGLSMVENMSKMGVKPTVATYTILIEEMLR 611



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 187/360 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T NT+++   K G + +A     ++    ++PD  TY SLI G C  ND N A ++
Sbjct: 212 PNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKV 271

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M ++G + + V++  I+  LC+ G++DE   L   M + D  P   TY+ ++     
Sbjct: 272 FNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFG 331

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +     +LF  M    C+ +  +Y ++++  CK ++++E+  +  EM+ KG+ P+VVT
Sbjct: 332 NDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVT 391

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  E  ++E AL++   M+ ++   +  TYN  I G  K  ++ +A+ L   + 
Sbjct: 392 YNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKML 451

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K    +  YN LI   CK+G  + A +L   L    LV D  TY++ I  LC   +M+
Sbjct: 452 ESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRME 511

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A DLF  ++E  +  N +++  LI G  +  K  + I LL +M  +  +P++S  + ++
Sbjct: 512 EACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLI 571



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 175/361 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P++ TY ++I G C+   V+ A  +F  M  +    + V+Y ++IHGLC A   +E   L
Sbjct: 247 PDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISL 306

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M +    P+V T+ VI+  L  N +  E   L + M +R   PN  TY+ ++D  C 
Sbjct: 307 FKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCK 366

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K++ +  +   M   G     V+YN LI GYC+   +E AL +   M S   +P   T
Sbjct: 367 ERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERT 426

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +   V  A+ L  +M    +     TYN+ I   CK G+   A +L   L 
Sbjct: 427 YNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLK 486

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D   Y+  ID LCKS R+E A +LF SL  + + A+ V Y  +I G C  G++D
Sbjct: 487 ENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKID 546

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  L   M      PN   + +LI+G  +  K  + + ++  M +  V P  +  ++++
Sbjct: 547 EAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILI 606

Query: 374 D 374
           +
Sbjct: 607 E 607



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 170/332 (51%), Gaps = 2/332 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E G+V  P+ VTYN +I G C+EG ++ A  +   M+  N  P+  TYN LI G      
Sbjct: 382 EKGLV--PSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKH 439

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            ++A  L  +M++  + PS+VT+N ++   CK G  D A +LLDL+ +  + P+ +TYS 
Sbjct: 440 VHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSV 499

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
            +D  C + ++  A +LF S++  G K ++V Y  LI+G+CK  +++EA+SL   M S+ 
Sbjct: 500 FIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSED 559

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
             P   TYN+L  G+ +  +V+  L + E M +  V    +TY   I+ + + G    A 
Sbjct: 560 CLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHAN 619

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            +F  +     + D+  Y   I   C SG ++ A  +   +    ++ D +TY ++I   
Sbjct: 620 RVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAY 679

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
              G    A ++   M +    P+  I+  LI
Sbjct: 680 ERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 166/327 (50%)

Query: 50  DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
            V +YN L+  L      +E KR++ EM++  + P++ T N +++   K G + EA+  +
Sbjct: 178 SVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYV 237

Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
             + Q  + P++FTY++L+ G+C    +N A ++F  M + GC+ ++VSY  +I+G C+ 
Sbjct: 238 SKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEA 297

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
             ++E +SL+++M      PTV TY  +   LF   +    + LF EM+      +  TY
Sbjct: 298 GRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTY 357

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
              +D +CK   + E+  +   +        +  YN LI G C+ GR+E ALE+   +  
Sbjct: 358 TVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMES 417

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
                +  TYN +I G      + KA  L   M E+ + P+++ + +LIH   +      
Sbjct: 418 NNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDS 477

Query: 350 VIELLHKMKEKKVMPDASIVSMVVDLL 376
             +LL  +KE  ++PD    S+ +D L
Sbjct: 478 AYKLLDLLKENGLVPDQWTYSVFIDTL 504



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 93/190 (48%)

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            K +V +YN L + L     ++   +++ EM  D +  +  T NT ++   K G IVEA 
Sbjct: 175 FKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEAN 234

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
                +       D   Y  LI G C++  +  A ++F  +P +    + V+Y  +IHGL
Sbjct: 235 LYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGL 294

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C  G++D+   LF  M E+   P V  +  +IH     ++  + ++L ++M+E+   P+ 
Sbjct: 295 CEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNV 354

Query: 367 SIVSMVVDLL 376
              +++VD +
Sbjct: 355 HTYTVMVDAM 364


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 114/361 (31%), Positives = 197/361 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNTI+  LC  G + +A  +  +   +   PDV+TY  LI   C  +   +A +L
Sbjct: 214 PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKL 273

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM ++G +P VVT+NV+++ +CK G++DEA + L+ M     +PN  T++ ++   C 
Sbjct: 274 LDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCS 333

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG+   AE+L   M   GC    V++NILIN  C+   +  A+ +  +M   G  P  ++
Sbjct: 334 TGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS 393

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +  +++ A++  + M       D  TYNT +  LCK+G +  AVE+   L 
Sbjct: 394 YNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS 453

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C   +  YN +IDGL K G+ E A++L   + R+ L  D++TY+ ++ GL  +G++D
Sbjct: 454 SKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVD 513

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A   F D+E   + PN I + +++ G  +  +  + I+ L  M  K+  P  +  ++++
Sbjct: 514 EAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILI 573

Query: 374 D 374
           +
Sbjct: 574 E 574



 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 107/307 (34%), Positives = 178/307 (57%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTYN +I+G+CKEG +D+A      M      P+V+T+N ++  +C    W +A++
Sbjct: 283 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEK 342

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ +G  PSVVTFN++++ LC+ G +  A  +L+ M      PN+ +Y+ L+ GFC
Sbjct: 343 LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFC 402

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K++RA E    M S GC  D V+YN L+   CK+ +V+ A+ +  ++ SKG  P ++
Sbjct: 403 KEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLI 462

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNT+  GL ++ + E A+KL +EM+R  +  D  TY++ + GL + G + EA++ F  L
Sbjct: 463 TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 522

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             L    +   YN ++ GLCKS + + A++    +  +       TY I+I G+  +G  
Sbjct: 523 EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLA 582

Query: 313 DKAHDLF 319
            +A DL 
Sbjct: 583 KEALDLL 589



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 193/363 (53%), Gaps = 3/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +   ++I G C+ G   KA  +   ++     PDV+TYN LI G C + + + A ++
Sbjct: 147 PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 206

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M    V P VVT+N I+  LC +GK+ +A  +LD  +Q++  P+  TY+ L++  C 
Sbjct: 207 LDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCK 263

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              + +A +L   M + G K D V+YN+LING CK   ++EA+     M S G +P V+T
Sbjct: 264 ESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVIT 323

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N +   +    +   A KL  +M R   +    T+N  I+ LC+ G +  A+++   + 
Sbjct: 324 HNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMP 383

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +  C  +  +YN L+ G CK  +++ A+E    +  R    D+VTYN ++  LC DG++D
Sbjct: 384 MHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD 443

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A ++   +     +P +I + T+I G  ++ K  + I+LL +M+ K + PD    S +V
Sbjct: 444 VAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 503

Query: 374 DLL 376
             L
Sbjct: 504 SGL 506



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 195/364 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY  +I+  CKE  V +A  L  +M+ +   PDVVTYN LI+G+C     +EA 
Sbjct: 247 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAI 306

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +    M   G QP+V+T N+I+  +C  G+  +A +LL  M+++   P+  T++ L++  
Sbjct: 307 KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL 366

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + RA ++   M   GC  + +SYN L++G+CK K+++ A+     MVS+G  P +
Sbjct: 367 CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDI 426

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL   L +  +V+ A+++  ++     +    TYNT IDGL K G    A++L   
Sbjct: 427 VTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDE 486

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DI  Y+ L+ GL + G+++ A++ F  L    +  + +TYN ++ GLC   Q
Sbjct: 487 MRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQ 546

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D+A D    M      P    +  LI G        + ++LL+++  + ++  +S   +
Sbjct: 547 TDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQV 606

Query: 372 VVDL 375
            V +
Sbjct: 607 AVKM 610



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 148/274 (54%), Gaps = 3/274 (1%)

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           +  L +NG++++  + L+ MV R   P+    ++L+ GFC  GK  +A  +   +E  G 
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
             D ++YN+LI+GYCK+ E++ AL +   M    + P VVTYNT+   L +  +++ A++
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 237

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           + +   + +   D  TY   I+  CK   + +A++L   +     + D+  YN LI+G+C
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           K GRL+ A++   ++P      +V+T+NI++  +C+ G+   A  L  DM     +P+V+
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 357

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            F  LI+   R     + I++L KM      P++
Sbjct: 358 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 391



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 153/293 (52%), Gaps = 4/293 (1%)

Query: 74  FFE-MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           F E M+ +G  P ++    ++   C+ GK  +A+ +++++ Q    P+  TY+ L+ G+C
Sbjct: 136 FLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYC 195

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G+I+ A ++   ++ M    D V+YN ++   C + ++++A+ +    + K   P V+
Sbjct: 196 KSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVI 252

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L     +   V  A+KL +EM+      D  TYN  I+G+CK G + EA++    +
Sbjct: 253 TYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 312

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C+ ++  +N ++  +C +GR   A +L   + R+     VVT+NI+I+ LC  G +
Sbjct: 313 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLL 372

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +A D+   M  +   PN + +  L+HGF +  K  + IE L  M  +   PD
Sbjct: 373 GRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPD 425



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 119/239 (49%), Gaps = 6/239 (2%)

Query: 141 EELFGSMESM---GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           E+ F  +ESM   G   D +    LI G+C+  + ++A  +   +   G  P V+TYN L
Sbjct: 131 EDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVL 190

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G  +  ++++AL++ + M   +VA D  TYNT +  LC +G + +A+E+       +C
Sbjct: 191 ISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKEC 247

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D+  Y  LI+  CK   +  A++L   +  +    DVVTYN++I+G+C +G++D+A  
Sbjct: 248 YPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIK 307

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              +M      PNVI    ++       +     +LL  M  K   P     +++++ L
Sbjct: 308 FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL 366



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G+  +PN +TYN+I+ GLCK    D+A      M  +   P   TY  LI G+ +     
Sbjct: 524 GLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAK 583

Query: 69  EAKRLFFEMMDQGV 82
           EA  L  E+  +G+
Sbjct: 584 EALDLLNELCSRGL 597


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 207/403 (51%), Gaps = 37/403 (9%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
            E+GV    NTV+YN I+  LC+ G V +A +L +QM+     PDVV+Y+ ++ G C   
Sbjct: 244 SEVGVCW--NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVE 301

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS------------------- 106
              +  +L  E+  +G++P+  T+N I+  LCK G++ EA                    
Sbjct: 302 QLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYT 361

Query: 107 ----------------RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
                           +L D M ++ + P+  TY++++ G C  GK+  A +LF  M S 
Sbjct: 362 TLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSK 421

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G K D+V+Y  LI+GYCK  E++EA SL+ +MV KG+ P VVTY  L  GL +  +V+ A
Sbjct: 422 GLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIA 481

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
            +L  EM    +  +  TYN  I+GLCK G I +AV+L   + +     D   Y  ++D 
Sbjct: 482 NELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDA 541

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
            CK G +  A EL R +  + L   +VT+N++++G C  G ++    L   M +  + PN
Sbjct: 542 YCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPN 601

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
              F +L+  +   N     IE+   M  + V+PD +  ++++
Sbjct: 602 ATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILI 644



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/398 (31%), Positives = 196/398 (49%), Gaps = 35/398 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN  TYN+II  LCK G V +A+ +   MK + I PD V Y +LI G   + + +   +
Sbjct: 319 KPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYK 378

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  + + P  VT+  ++  LC+ GK+ EA +L   M+ + ++P+  TY+ L+DG+C
Sbjct: 379 LFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYC 438

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A  L   M   G   + V+Y  L++G CK  EV+ A  L  EM  KG++P V 
Sbjct: 439 KAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVC 498

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L  GL ++  +E A+KL EEM       DT TY T +D  CK G + +A EL R +
Sbjct: 499 TYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIM 558

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLE---------------------------------- 278
                +  I  +N L++G C SG LE                                  
Sbjct: 559 LDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNM 618

Query: 279 -IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
              +E+++ +  + +V D  TYNI+I G C    M +A  L  +M E   +     + +L
Sbjct: 619 RATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSL 678

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
           I GF +  K  +  +L  +M+    + +  I  + VD+
Sbjct: 679 IKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDV 716



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 168/306 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY  +IDG CK G + +A +L  QM  + + P+VVTY +L+ GLC   + + A  
Sbjct: 424 KPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANE 483

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM ++G+QP+V T+N +++ LCK G +++A +L++ M      P+  TY+T+MD +C
Sbjct: 484 LLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYC 543

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++ +A EL   M   G +   V++N+L+NG+C +  +E+   L + M+ KGI P   
Sbjct: 544 KMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNAT 603

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N+L       + +   +++++ M    V  DT+TYN  I G CK   + EA  L + +
Sbjct: 604 TFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEM 663

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 L   +YN LI G  K  + E A +LF  +     +A+   Y+I +     +G  
Sbjct: 664 VEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNW 723

Query: 313 DKAHDL 318
           +   +L
Sbjct: 724 ENTLEL 729



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 187/361 (51%), Gaps = 1/361 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW-NEAKRL 73
           + + ++     L + G + +A  LF ++    +   V + N  +  L ++ D    A R+
Sbjct: 180 HPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRV 239

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E  + GV  + V++N+I+  LC+ GK+ EA  LL  M  R   P+  +YS ++DG+C 
Sbjct: 240 FREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQ 299

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++ +  +L   ++  G K +  +YN +I+  CK   V EA  + R M ++ I P  V 
Sbjct: 300 VEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVV 359

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G  +   V    KLF+EM+R  +  D  TY + I GLC+ G +VEA +LF  + 
Sbjct: 360 YTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEML 419

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D   Y  LIDG CK+G ++ A  L   +  + L  +VVTY  ++ GLC  G++D
Sbjct: 420 SKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVD 479

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A++L  +M E  + PNV  +  LI+G  ++    + ++L+ +M      PD    + ++
Sbjct: 480 IANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIM 539

Query: 374 D 374
           D
Sbjct: 540 D 540



 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 83/173 (47%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VT+N +++G C  G ++  + L   M  + I P+  T+NSL+   C  N+      
Sbjct: 564 QPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIE 623

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++  M  QGV P   T+N+++   CK   M EA  L   MV++     A +Y++L+ GF 
Sbjct: 624 IYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFY 683

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
              K   A +LF  M + G   +   Y+I ++   +    E  L L  E + K
Sbjct: 684 KRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEK 736



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 81/163 (49%), Gaps = 13/163 (7%)

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GIL----KCELDIQAYNCLIDGLCK 273
           D  A    ++ F   L + G ++EA +LF  L   G+L     C L +   +   DG+  
Sbjct: 176 DWGAHPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGI-- 233

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
                 A  +FR      +  + V+YNI++H LC  G++ +AH L + ME     P+V+ 
Sbjct: 234 ----RTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVS 289

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +  ++ G+ ++ +  KV++L+ +++ K + P+    + ++  L
Sbjct: 290 YSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFL 332


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 103/268 (38%), Positives = 170/268 (63%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + N V Y+T+ID LCK    D A  LF +M+ + + P+V+TY+SLI  LC+   W++A R
Sbjct: 250 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASR 309

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+++ + P++VTF+ ++D   K GK+ +A +L + M++R + PN FTYS+L++GFC
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  ++  A+++   M    C  + V+YN LING+CK K V++ + L+REM  +G+    V
Sbjct: 370 MLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  G F+    ++A  +F++M    V  +  TYN  +DGLCKNG + +A+ +F  L
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIA 280
                E DI  YN +I+G+CK+G+ ++ 
Sbjct: 490 QRSTMEPDIYTYNIMIEGMCKAGKWKMG 517



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 111/300 (37%), Positives = 174/300 (58%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ VTY  +++GLCK G  D A  L  +M+   I  +VV Y+++I  LC     ++A 
Sbjct: 214 CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 273

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM ++GV+P+V+T++ ++  LC  G+  +ASRLL  M++R + PN  T+S L+D F
Sbjct: 274 NLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF 333

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GK+ +AE+L+  M       +  +Y+ LING+C    + EA  +   M+ K   P V
Sbjct: 334 VKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNV 393

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  G  +  +V+  ++LF EM +  +  +T TY T I G  +      A  +F+ 
Sbjct: 394 VTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 453

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +    +I  YN L+DGLCK+G+L  A+ +F  L R  +  D+ TYNIMI G+C  G+
Sbjct: 454 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 189/362 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT N++++G C    +  A AL  QM      PD VT+ +LIHGL   N  +EA  
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+ +G QP +VT+  +++ LCK G  D A  LL+ M    +  N   YST++D  C
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                + A  LF  ME+ G + + ++Y+ LI+  C      +A  L  +M+ + I P +V
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++ L     +  ++  A KL+EEM +  +  +  TY++ I+G C    + EA ++   +
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  ++  YN LI+G CK+ R++  +ELFR + +R LV + VTY  +IHG       
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  +F  M    V PN++ +  L+ G  +  K +K + +   ++   + PD    +++
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504

Query: 373 VD 374
           ++
Sbjct: 505 IE 506



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 194/362 (53%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  TYN +I+  C+   +  A AL  +M      PD+VT NSL++G CH N  ++A  L 
Sbjct: 112 NLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALV 171

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M++ G +P  VTF  ++  L  + K  EA  L+D MVQR  +P+  TY  +++G C  
Sbjct: 172 DQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKR 231

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G  + A  L   ME+   + + V Y+ +I+  CK +  ++AL+L+ EM +KG++P V+TY
Sbjct: 232 GDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 291

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           ++L   L    +   A +L  +M    +  +  T++  ID   K G +V+A +L+  +  
Sbjct: 292 SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK 351

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + +I  Y+ LI+G C   RL  A ++   + R+  + +VVTYN +I+G C   ++DK
Sbjct: 352 RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDK 411

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +LF +M +  +  N + + TLIHGF +         +  +M    V P+    ++++D
Sbjct: 412 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 471

Query: 375 LL 376
            L
Sbjct: 472 GL 473



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 158/309 (51%)

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
           + ++A  LF  M      PS++ F+ ++  + K  K D      + M    +  N +TY+
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L++ FC   +++ A  L G M  +G + D V+ N L+NG+C    + +A++L  +MV  
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G KP  VT+ TL  GLF  ++   A+ L + M +     D  TY   ++GLCK G    A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           + L   +   K E ++  Y+ +ID LCK    + AL LF  +  + +  +V+TY+ +I  
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LCN G+   A  L  DM E  + PN++ F  LI  FV+  K  K  +L  +M ++ + P+
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357

Query: 366 ASIVSMVVD 374
               S +++
Sbjct: 358 IFTYSSLIN 366



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 171/334 (51%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +D A  LF  M      P ++ ++ L+  +   N ++       +M   G+  ++ T+N+
Sbjct: 59  LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +++  C+  ++  A  LL  M++    P+  T ++L++GFC   +I+ A  L   M  MG
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            K D V++  LI+G   + +  EA++L   MV +G +P +VTY  +  GL +    + AL
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            L  +M+   + A+   Y+T ID LCK  +  +A+ LF  +       ++  Y+ LI  L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C  GR   A  L   +  R +  ++VT++ +I      G++ KA  L+ +M + ++ PN+
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             + +LI+GF  +++  +  ++L  M  K  +P+
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 392



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 119/276 (43%), Gaps = 35/276 (12%)

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           ++D+A  L  +M Q    P+   +S L+       K +        ME +G  H+  +YN
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           ILIN +C+   +  AL+L  +M+  G +P +VT N+L  G    +++  A+ L ++M   
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
               DT T+ T I GL  +    EAV                    LID + + G     
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAV-------------------ALIDRMVQRG----- 213

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
                         D+VTY  +++GLC  G  D A +L   ME   +  NV+I+ T+I  
Sbjct: 214 -----------CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +       + L  +M+ K V P+    S ++  L
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 37/60 (61%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V   PN +TYN ++DGLCK G + KA  +F  ++   + PD+ TYN +I G+C A  W
Sbjct: 455 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 201/362 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V+Y TIIDG C  G + K   L  +M+ + + P++ TY+S+I  LC +    E +
Sbjct: 141 CIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGE 200

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++  EMM +GV P  V +  ++D  CK G    A +L   M  R++ P++  +S L+ G 
Sbjct: 201 KVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGL 260

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
             +GK+  A++LF  M   G + D+V+Y  LI+GYCK  E+++A  L+ +MV  G+ P V
Sbjct: 261 SGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNV 320

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY  L  GL +  +++ A +L  EM R  +  + STYNT ++GLCK G I++AV+L   
Sbjct: 321 VTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEE 380

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D   Y  L+D   K+G +  A EL R +  R L   VVT+N++++GLC  G+
Sbjct: 381 MKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGK 440

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           ++    L   M E  + PN   + +++  +   N      E+   M  + V+PD++  ++
Sbjct: 441 LEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNI 500

Query: 372 VV 373
           ++
Sbjct: 501 LI 502



 Score =  200 bits (508), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 190/365 (52%), Gaps = 6/365 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V Y T+IDG CK G    A  LF +M+   I PD + +++LI GL  +    EA +L
Sbjct: 213 PDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKL 272

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+ +G +P  VT+  ++D  CK G+M +A  L + MVQ  + PN  TY+ L DG C 
Sbjct: 273 FNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCK 332

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G+++ A EL   M   G + +  +YN ++NG CK   + +A+ L  EM   G+ P  +T
Sbjct: 333 SGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTIT 392

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           Y TL    ++  ++  A +L  EM    +     T+N  ++GLC +G + +   L + + 
Sbjct: 393 YTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWML 452

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             GI+    +   YN ++   C    + I+ E++R +  + +V D  TYNI+I G C   
Sbjct: 453 EKGIMP---NAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKAR 509

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            M +A  L  +M E         +  LI GF +  K  +  +L  +M+ + ++  A I +
Sbjct: 510 NMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYN 569

Query: 371 MVVDL 375
           + VD+
Sbjct: 570 LFVDM 574



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 95/246 (38%), Positives = 151/246 (61%), Gaps = 1/246 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  TYNTI++GLCK G + +A  L  +MK   ++PD +TY +L+       +  +A+ L 
Sbjct: 354 NISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELL 413

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+D+G+QP+VVTFNV+M+ LC +GK+++  RLL  M+++ + PNA TY+++M  +C+ 
Sbjct: 414 REMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIR 473

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
             +  + E++  M + G   D  +YNILI G+CK + ++EA  L++EMV K    T  +Y
Sbjct: 474 NNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSY 533

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L  G F+  ++  A +LFEEM+R+ + A    YN F+D   + G +   +EL     I
Sbjct: 534 NALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDE-AI 592

Query: 255 LKCELD 260
            KC LD
Sbjct: 593 EKCLLD 598



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 167/306 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTY  +IDG CK G + KA  L  QM    + P+VVTY +L  GLC + + + A  
Sbjct: 282 EPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANE 341

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  +G+Q ++ T+N I++ LCK G + +A +L++ M +  + P+  TY+TLMD + 
Sbjct: 342 LLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYY 401

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            TG++ +A EL   M   G +   V++N+L+NG C + ++E+   L + M+ KGI P   
Sbjct: 402 KTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAA 461

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN++       + +  + +++  M    V  D++TYN  I G CK   + EA  L + +
Sbjct: 462 TYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEM 521

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +  L   +YN LI G  K  +L  A +LF  + R  LVA    YN+ +     +G M
Sbjct: 522 VEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNM 581

Query: 313 DKAHDL 318
           +   +L
Sbjct: 582 ETTLEL 587



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 164/303 (54%)

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++F E    GV  +  ++N++M+ L + GK+ EA  LL  M  +   P+  +Y+T++DG+
Sbjct: 96  KVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGY 155

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++ +  +L   M+  G K +  +Y+ +I   CK+ +V E   + REM+ +G+ P  
Sbjct: 156 CHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDH 215

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V Y TL  G  ++   + A KLF EM+  ++  D+  ++  I GL  +G +VEA +LF  
Sbjct: 216 VIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNE 275

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     E D   Y  LIDG CK G ++ A  L   + +  L  +VVTY  +  GLC  G+
Sbjct: 276 MIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGE 335

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D A++L  +M    +  N+  + T+++G  +     + ++L+ +MKE  + PD    + 
Sbjct: 336 LDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTT 395

Query: 372 VVD 374
           ++D
Sbjct: 396 LMD 398



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 84/173 (48%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VT+N +++GLC  G ++  + L   M  + I P+  TYNS++   C  N+   +  
Sbjct: 422 QPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTE 481

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++  M  QGV P   T+N+++   CK   M EA  L   MV++     A +Y+ L+ GF 
Sbjct: 482 IYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFF 541

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
              K+  A +LF  M   G       YN+ ++   +   +E  L L  E + K
Sbjct: 542 KRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEK 594



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 83/159 (52%), Gaps = 5/159 (3%)

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR---L 277
           D  +D   ++ F   L + G + EA + F  L  L   + + A +C +   C S +   L
Sbjct: 34  DWGSDPHVFDVFFQVLVEAGLLNEARKFFDKL--LNYGVALSAGSCNLYLTCLSSKRDML 91

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
            + L++F   P+  +  +  +YNI+++ L   G++ +AH L + ME     P+V+ + T+
Sbjct: 92  GMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTI 151

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           I G+  + +  KV++L+ +M+ K + P+    S ++ LL
Sbjct: 152 IDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLL 190


>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
 gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
          Length = 413

 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 131/366 (35%), Positives = 195/366 (53%), Gaps = 1/366 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEA 70
           C P+ V YNT+I G CK G  D+A  +F ++K E +  P+ V++++L+  LC  +   +A
Sbjct: 7   CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA 66

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             +F EM+  G+Q  V   N ++   C+ G + +A RLL  M       + FTYS LMD 
Sbjct: 67  LAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDA 126

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               G+  +A E+F +M+  GC  D V YN+LI+   K  +V+EAL L  +M  KGI P 
Sbjct: 127 LGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPD 186

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             TYN +   L    + E A   F  M+R   + D  TYNT ++GL K     EA +LF 
Sbjct: 187 CRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFD 246

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +   KC  D+  +  LID L K+GR+E ALE    L +   V +   YN +I G C  G
Sbjct: 247 EMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSG 306

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           Q+DK ++LF DM E +  P+ I +  L+ GF R    S  +ELL +M  +   P  +  +
Sbjct: 307 QVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYN 366

Query: 371 MVVDLL 376
           +++  L
Sbjct: 367 VLIRSL 372



 Score =  164 bits (414), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 174/375 (46%), Gaps = 39/375 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN V+++T++  LCK      A A+F +M G  +  DV   N+LIH  C      +A+
Sbjct: 43  CKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQAR 102

Query: 72  RL-----------------------------------FFEMMDQGVQPSVVTFNVIMDEL 96
           RL                                   F  M   G  P  V +NV++  L
Sbjct: 103 RLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCL 162

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
            K GK+DEA  LL+ M ++ + P+  TY+ ++D     G+  +A   FG M+      D 
Sbjct: 163 GKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDV 222

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           V+YN L+NG  K +  +EA  L+ EM +    P + T+ TL   L +  ++E AL+    
Sbjct: 223 VTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSAR 282

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           + +     ++  YN  I G C++G + +  ELF+ +    C  D   Y  L+ G  + G 
Sbjct: 283 LVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGH 342

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
             +A+EL + + R      + TYN++I  L   GQ++ A+ LF +M      P++  +  
Sbjct: 343 TSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSA 402

Query: 337 LIHGFVRINKPSKVI 351
           L +    ++ P+K +
Sbjct: 403 LPN----LSTPNKSV 413



 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 139/262 (53%), Gaps = 1/262 (0%)

Query: 116 DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEE 174
           D  P+   Y+TL+ G+C  G  +RA ++F  ++  G CK + VS++ L+   CK     +
Sbjct: 6   DCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATD 65

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           AL++++EM+  G++  V   NTL      +  +  A +L   M       D  TY+  +D
Sbjct: 66  ALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMD 125

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
            L K G   +A+E+F  +    C  D   YN LI  L K G+++ ALEL   + R+ ++ 
Sbjct: 126 ALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMP 185

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           D  TYNI+I  L + G+ +KA+  F  M+    +P+V+ + TL++G  ++ +  +  +L 
Sbjct: 186 DCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLF 245

Query: 355 HKMKEKKVMPDASIVSMVVDLL 376
            +M+  K MPD +    ++D L
Sbjct: 246 DEMQANKCMPDLTTFGTLIDTL 267


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 123/362 (33%), Positives = 185/362 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K ++ TYN +I  L + GFV K +AL ++M+ E I P +VTYN++IHGL  +     A+ 
Sbjct: 311 KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQL 370

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM   G+ P ++T+N +++  CK G + EA  LL  + +  + P   TY+TL+DG+C
Sbjct: 371 KFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYC 430

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  L   M   GC  D  +Y IL+NG  K + +  A   + EM+SKG++P   
Sbjct: 431 RLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCF 490

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YNT       +     A +L E M    +  DT TYN  IDGLCK G + +A +L   +
Sbjct: 491 AYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKM 550

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D   Y CLI   C+ G L  A +L   +    L   VVTY I+IH  C  G +
Sbjct: 551 VSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNL 610

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A+  F  M +  + PN I +  LIH   R  +        H+M E+ + P+    +++
Sbjct: 611 YSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLL 670

Query: 373 VD 374
           +D
Sbjct: 671 ID 672



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 172/363 (47%), Gaps = 35/363 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTYN II GL K   V+ A+  F +M+   + PD++TYNS+++G C A +  EA  L
Sbjct: 347 PTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWL 406

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++   G+ P+V+T+N ++D  C+ G ++EA RL + MV++   P+  TY+ LM+G   
Sbjct: 407 LGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHK 466

Query: 134 TGKINRAEELFGSMESMGCKHD-----------------------------------DVS 158
              +  A E F  M S G + D                                    V+
Sbjct: 467 VRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVT 526

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN++I+G CK   +++A  L  +MVS G++P  +TY  L     E   +  A KL   M 
Sbjct: 527 YNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMV 586

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
            D +     TY   I   C+ G +  A   FR +  +  E +   YN LI  LC++GR  
Sbjct: 587 SDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTL 646

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           +A   F  +  R L  +  TY ++I G C +G    A  L+ +M +N + P+      L 
Sbjct: 647 LAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALF 706

Query: 339 HGF 341
            GF
Sbjct: 707 KGF 709



 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 175/368 (47%), Gaps = 1/368 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C  N VTYN +I  L +EG ++ A  L   M+         TYN LI  L       
Sbjct: 273 GGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSK-KASSFTYNPLITALLERGFVQ 331

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           + + L  EM ++G+ P++VT+N I+  L K+ +++ A      M    + P+  TY++++
Sbjct: 332 KVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSML 391

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +G+C  G +  A  L G +   G     ++YN LI+GYC+   +EEA  L  EMV +G  
Sbjct: 392 NGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCF 451

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P V TY  L  G  ++  +  A + F+EM    +  D   YNT I      G   +A +L
Sbjct: 452 PDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQL 511

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              + +     D   YN +IDGLCK+G L+ A +L   +    L  D +TY  +IH  C 
Sbjct: 512 REVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCE 571

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G + +A  L   M  + + P+V+ +  LIH   R            KM +  + P+   
Sbjct: 572 RGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEIT 631

Query: 369 VSMVVDLL 376
            ++++  L
Sbjct: 632 YNVLIHAL 639



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 166/342 (48%), Gaps = 3/342 (0%)

Query: 37  ALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
           A F  +    + PDV   N ++  L  A  W++ + ++ EM+   ++P++VT+N ++D  
Sbjct: 194 AAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSF 253

Query: 97  CKNGKMDEASRLLDLMVQR--DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            K G+ DEAS LL  M  +      N  TY+ ++      G +  A +L  SM  +  K 
Sbjct: 254 LKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMR-LSKKA 312

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
              +YN LI    +   V++  +L  EM ++GI PT+VTYN +  GL +  QVE A   F
Sbjct: 313 SSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKF 372

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
            EM+   +  D  TYN+ ++G CK G + EA+ L   L        +  YN LIDG C+ 
Sbjct: 373 AEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRL 432

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G LE A  L   +  +    DV TY I+++G      +  A + F +M    + P+   +
Sbjct: 433 GGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAY 492

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            T I   + +    K  +L   M  K + PD    ++++D L
Sbjct: 493 NTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGL 534



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 187/397 (47%), Gaps = 38/397 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+    N ++  L      D  +A++ +M    I P +VTYN+L+         +EA  L
Sbjct: 206 PDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASML 265

Query: 74  FFEMMDQGVQPSV--VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             EM  QG    +  VT+NV++  L + G ++ A++L+D M +   + ++FTY+ L+   
Sbjct: 266 LKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-RLSKKASSFTYNPLITAL 324

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G + + E L   ME+ G     V+YN +I+G  K+++VE A   + EM + G+ P +
Sbjct: 325 LERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDL 384

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYN++  G  +   ++ AL L  +++R  +A    TYNT IDG C+ G + EA  L   
Sbjct: 385 ITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEE 444

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL------P----------------- 288
           +    C  D+  Y  L++G  K   L +A E F  +      P                 
Sbjct: 445 MVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGD 504

Query: 289 -------RRVLV-----ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
                  R V++      D VTYN++I GLC  G +  A DL + M  + + P+ I +  
Sbjct: 505 THKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTC 564

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           LIH        S+  +LL+ M    + P     ++++
Sbjct: 565 LIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILI 601



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 111/204 (54%), Gaps = 1/204 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVTYN IIDGLCK G +  AK L ++M  + + PD +TY  LIH  C     +EA++L
Sbjct: 522 PDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKL 581

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+  G+QPSVVT+ +++   C+ G +  A      M+   + PN  TY+ L+   C 
Sbjct: 582 LNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCR 641

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG+   A   F  M   G   +  +Y +LI+G C+     +A+ LY EM   GI P   T
Sbjct: 642 TGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCT 701

Query: 194 YNTLFLGLFEIHQVEHALKLFEEM 217
           +N LF G F+   + HA++  E +
Sbjct: 702 HNALFKG-FDKGHMYHAIEYLENI 724



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 142/309 (45%), Gaps = 36/309 (11%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  +TYNT+IDG C+ G +++A+ L  +M  +   PDV TY  L++G     +   A+  
Sbjct: 417 PTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREF 476

Query: 74  FFEMMDQGVQPS-----------------------------------VVTFNVIMDELCK 98
           F EM+ +G+QP                                     VT+NVI+D LCK
Sbjct: 477 FDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCK 536

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
            G + +A  L   MV   ++P+  TY+ L+   C  G ++ A +L   M S G +   V+
Sbjct: 537 TGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVT 596

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y ILI+  C+   +  A   +R+M+  GI+P  +TYN L   L    +   A   F EM 
Sbjct: 597 YTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEML 656

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +A +  TY   IDG C+ G   +A+ L+  +       D   +N L  G  K G + 
Sbjct: 657 ERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDK-GHMY 715

Query: 279 IALELFRSL 287
            A+E   ++
Sbjct: 716 HAIEYLENI 724



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 66/127 (51%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           NG +    +P+ VTY  +I   C+ G +  A   F +M    I P+ +TYN LIH LC  
Sbjct: 583 NGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRT 642

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
                A   F EM+++G+ P+  T+ +++D  C+ G   +A RL   M Q  + P+  T+
Sbjct: 643 GRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTH 702

Query: 125 STLMDGF 131
           + L  GF
Sbjct: 703 NALFKGF 709



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 3/192 (1%)

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
           L+ +R +   G+ P V   N +   L +  + +    ++ EM + ++     TYNT +D 
Sbjct: 193 LAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDS 252

Query: 236 LCKNGYIVEAVELFRTLGIL--KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
             K G   EA  L + +      C L+   YN +I  L + G LE A +L  S+ R    
Sbjct: 253 FLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-RLSKK 311

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
           A   TYN +I  L   G + K   L ++ME   + P ++ +  +IHG ++  +       
Sbjct: 312 ASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLK 371

Query: 354 LHKMKEKKVMPD 365
             +M+   ++PD
Sbjct: 372 FAEMRAMGLLPD 383


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 114/329 (34%), Positives = 181/329 (55%), Gaps = 2/329 (0%)

Query: 50  DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
           DV++Y+  I+GLC      EA  +F EM ++G  P   T+N++++ LCK+ +++    L+
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
           D M  R   P   TY+TL+ GFC  G+++ A ++   ME  G   + V+Y  LI G C  
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 170 KEVEEALSLYREMVSKGIK--PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
            EVE A+ + +EM  +G +  P VVTY  L  GL +    E  ++  +EM       + +
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           TY   I GLC+ G  +EA  L   +  + CELD+  YN LIDGLCK G L+ A E+   +
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILM 329

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
             + +  DV TY  +I GLC+ G +D+A  L  +M    + PN + + TLI+GF + ++ 
Sbjct: 330 VEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRT 389

Query: 348 SKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              ++L+++MK   +MP   I  ++   L
Sbjct: 390 DHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 163/329 (49%), Gaps = 10/329 (3%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + ++Y+  I+GLCK+G + +A  +F +M+ +   PD  TYN LI+GLC          L 
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM  +G  P+VVT+  ++   C  G++D A  +LD M  R + PN  TY+ L+ G C  
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 135 GKINRAEELFGSMESMG--CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           G++ RA  +   M+  G  C  + V+Y  LI+G C+    E  +    EM+  G  P   
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L  GL +      A  L  EM       D   YN+ IDGLCK G     ++  R +
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMG----ELDFAREM 325

Query: 253 GILKCE----LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            IL  E     D+  Y  LI GLC +G L+ AL L + +  + +V + VTY  +I+G   
Sbjct: 326 QILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQ 385

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             + D A  L  +M+ N + P   I+  L
Sbjct: 386 ADRTDHALQLVNEMKSNGLMPAGDIYKIL 414



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 150/295 (50%), Gaps = 2/295 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P++ TYN +I+GLCK+  ++   +L  +M+    +P VVTY +LIHG C A   + A  +
Sbjct: 124 PDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDI 183

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR--DVRPNAFTYSTLMDGF 131
             EM  +G+ P+ VT+  ++  LC  G+++ A  +L  M  R  +  PN  TY+ L+ G 
Sbjct: 184 LDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGL 243

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G      E    M   GC  ++ +Y  LI+G C+     EA  L  EMV+ G +  V
Sbjct: 244 CQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDV 303

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YN+L  GL ++ +++ A ++   M    VA D  TY + I GLC  G + EA+ L + 
Sbjct: 304 VIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQE 363

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +       +   Y  LI+G  ++ R + AL+L   +    L+     Y I+   L
Sbjct: 364 MRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 104/194 (53%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C PN VTY  +I GLC++G  +       +M      P+  TY +LIHGLC    + 
Sbjct: 226 GNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFL 285

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  L  EM+  G +  VV +N ++D LCK G++D A  +  LMV++ V P+ FTY++L+
Sbjct: 286 EAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLI 345

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C  G ++ A  L   M + G   + V+Y  LING+ +    + AL L  EM S G+ 
Sbjct: 346 QGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLM 405

Query: 189 PTVVTYNTLFLGLF 202
           P    Y  LF  L+
Sbjct: 406 PAGDIYKILFKSLY 419



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 80/152 (52%)

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           +  +L+++     +    D  +Y+  I+GLCK G I EA+E+FR +       D   YN 
Sbjct: 72  IPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNI 131

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LI+GLCK  +LE+ + L   +  R     VVTY  +IHG C  G++D A D+  +ME   
Sbjct: 132 LINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRG 191

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           + PN + +  LI G     +  + I +L +MK
Sbjct: 192 ITPNTVTYTALIQGLCDCGEVERAILVLKEMK 223



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 2/208 (0%)

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           + + +  +L +YR  +       V++Y+    GL +  Q+  A+++F EM+    A D+ 
Sbjct: 68  RRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSF 127

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           TYN  I+GLCK+  +   V L   +        +  Y  LI G C +GR++ A+++   +
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME--ENAVAPNVIIFVTLIHGFVRIN 345
             R +  + VTY  +I GLC+ G++++A  +  +M+   N   PNV+ +  LIHG  +  
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKG 247

Query: 346 KPSKVIELLHKMKEKKVMPDASIVSMVV 373
                +E L +M      P+ +  + ++
Sbjct: 248 LFEMGMEFLDEMIISGCFPNNATYTALI 275



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 69/123 (56%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N  + + C+ + V YN++IDGLCK G +D A+ + + M  + + PDV TY SLI GLC A
Sbjct: 292 NEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDA 351

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
              +EA  L  EM  +G+ P+ VT+  +++   +  + D A +L++ M    + P    Y
Sbjct: 352 GLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIY 411

Query: 125 STL 127
             L
Sbjct: 412 KIL 414


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/401 (32%), Positives = 211/401 (52%), Gaps = 37/401 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +TYN II  LCK G +D+A   F +M  +N NPDV TY++L++GLC     +EA  
Sbjct: 171 QPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVF 230

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  +G  P+ VTFNV++D L KNG +  A++L+D M  +   PN  TY+TL+ G C
Sbjct: 231 LLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLC 290

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK+++A  L   M S  C  + V+Y  +ING  K +  E+ + +   M  +G K    
Sbjct: 291 LKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEY 350

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y++L  GLF+  + E+A++L++EM       +   Y  FIDGLC++    EA ++ + +
Sbjct: 351 IYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEM 410

Query: 253 -----------------GILK------------------CELDIQAYNCLIDGLCKSGRL 277
                            G  K                     ++   + L++GLC+SGRL
Sbjct: 411 LSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRL 470

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM--EENAVAPNVIIFV 335
             AL ++  +    L  DVV Y+ MI GLC+ G +DK   LF +M  +E    P+V+ + 
Sbjct: 471 REALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYN 530

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            L +   R +  ++ I+LL+ M ++   PD+   ++ ++ L
Sbjct: 531 ILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 571



 Score =  173 bits (439), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 196/405 (48%), Gaps = 40/405 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN---INPDVVTYNSLIHGLCHANDWN 68
           CK    ++N++++ + +EG    A   +L + G N     P+++TYN +I  LC     +
Sbjct: 132 CKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQID 191

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A   F EM  +   P V T++ +M+ LCK  ++DEA  LLD M      PN  T++ L+
Sbjct: 192 RAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLI 251

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           D     G ++RA +L  +M   GC  ++V+YN LI+G C   ++++ALSL  +MVS    
Sbjct: 252 DALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCV 311

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  VTY T+  GL +  + E  + +   M+     A+   Y++ I GL K G    AV L
Sbjct: 312 PNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRL 371

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY--------- 299
           ++ +    C+ ++  Y   IDGLC+  + + A ++ + +  +  + +  TY         
Sbjct: 372 WKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFK 431

Query: 300 --------------------------NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
                                     +++++GLC  G++ +A  ++  M    + P+V+ 
Sbjct: 432 KGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVA 491

Query: 334 FVTLIHGFVRINKPSKVIELLHKM--KEKKVMPDASIVSMVVDLL 376
           + ++I G   +    K ++L ++M  +E K  PD    +++ + L
Sbjct: 492 YSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNAL 536



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 130/259 (50%), Gaps = 23/259 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN V Y   IDGLC++   D+A+ +  +M  +   P+  TY+SL+ G     D  +A 
Sbjct: 380 CKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAI 439

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            ++ EMM Q ++ +VV  +V+++ LC++G++ EA  +   M+   ++P+   YS+++ G 
Sbjct: 440 LVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGL 499

Query: 132 CLTGKINRAEELFGSMESMGCKH--DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           C  G +++  +LF  M+    K   D V+YNIL N  C+   +  A+ L   M+ +G  P
Sbjct: 500 CDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDP 559

Query: 190 TVVTYN----------------TLFLG-----LFEIHQVEHALKLFEEMQRDDVAADTST 228
             +T N                 LFL      L +  +   AL++ EEM    +  + ST
Sbjct: 560 DSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPST 619

Query: 229 YNTFIDGLCKNGYIVEAVE 247
           ++  I   CK   I E ++
Sbjct: 620 WSRVIQRTCKPKRIRETID 638



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 23/153 (15%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE--NINPDVVTYNSLIHGLCHAN 65
           +G   KP+ V Y+++I GLC  G VDK   LF +M+ +     PDVVTYN L + LC  +
Sbjct: 481 LGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQD 540

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL------CKNGK--MDE------------- 104
           +   A  L   M+D+G  P  +T N+ ++ L       ++G+  +DE             
Sbjct: 541 NLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLS 600

Query: 105 ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           A R+++ M+ R + P   T+S ++   C   +I
Sbjct: 601 ALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRI 633


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/323 (37%), Positives = 181/323 (56%), Gaps = 21/323 (6%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + +P+ V YNTIIDGLCK+  V+ A  L+ +M  + I P VVTYN+LI GLC      
Sbjct: 145 GKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLK 204

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  L  +M+ + + P+V TF++++D  CK GKM EA  +  +M++ DV+PN  TY++LM
Sbjct: 205 DAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLM 264

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG  L   + +A+ +F +M  M                     V+EA++L+ EM  K I 
Sbjct: 265 DGHHLVNVVKKAKSIFNTMIKM---------------------VDEAMNLFEEMHFKQIY 303

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P +V YN+L  GL +  +  +ALK   EM       D  TYN+ +D LCKN ++ +A+EL
Sbjct: 304 PDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIEL 363

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              L     +  +  YN LI+GLCKSGRL+ A ++F  L  +    DV TYN MI G C 
Sbjct: 364 LTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCK 423

Query: 309 DGQMDKAHDLFLDMEENAVAPNV 331
            G  D+   +   M+++  +P+ 
Sbjct: 424 KGLFDETLAMVSKMKDSGCSPDA 446



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 194/376 (51%), Gaps = 14/376 (3%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + +T+ T+I GLC +G + KA     ++  +    + V+Y +LI+GLC       A    
Sbjct: 81  DAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFL 140

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             +  + VQP VV +N I+D LCK+  +++A  L   MV + + P+  TY+TL+ G C+ 
Sbjct: 141 RRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIM 200

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            ++  A  L   M          +++ILI+ +CK  +++EA +++  M+ + +KP +VTY
Sbjct: 201 AQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTY 260

Query: 195 NTLFLG------------LFE--IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           N+L  G            +F   I  V+ A+ LFEEM    +  D   YN+ IDGLCK+G
Sbjct: 261 NSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSG 320

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
               A++    +       DI  YN L+D LCK+  ++ A+EL   L  + +   V TYN
Sbjct: 321 RTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYN 380

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           I+I+GLC  G++  A  +F D+       +V  +  +I GF +     + + ++ KMK+ 
Sbjct: 381 ILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDS 440

Query: 361 KVMPDASIVSMVVDLL 376
              PDA    +++  L
Sbjct: 441 GCSPDAKNCEIIIRSL 456



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 184/377 (48%), Gaps = 14/377 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   +  I+  L K        +L  QM+   +  ++VT + LI+          +  +
Sbjct: 10  PSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSV 69

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  ++ +G     +TF  ++  LC  G++ +A    D +V +  + N  +Y TL++G C 
Sbjct: 70  FANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCK 129

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A E    ++    + D V YN +I+G CK+K V +A +LY EMV+K I P+VVT
Sbjct: 130 VGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVT 189

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL  + Q++ A+ L  +M  +D+     T++  ID  CK G + EA  +F  + 
Sbjct: 190 YNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMM 249

Query: 254 ILKCELDIQAYNCLIDG-----LCKSGR---------LEIALELFRSLPRRVLVADVVTY 299
               + +I  YN L+DG     + K  +         ++ A+ LF  +  + +  D+V Y
Sbjct: 250 KEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIY 309

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           N +I GLC  G+   A     +M      P++  + +L+    +     K IELL K+K+
Sbjct: 310 NSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKD 369

Query: 360 KKVMPDASIVSMVVDLL 376
           + + P     +++++ L
Sbjct: 370 QGIQPSVCTYNILINGL 386



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 119/264 (45%)

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
           L+  ++  P+ F +  ++         +    L   ME  G   + V+ +ILIN Y +  
Sbjct: 2   LLHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLG 61

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
           +   + S++  ++ KG     +T+ TL  GL    ++  AL   +++       +  +Y 
Sbjct: 62  QNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYG 121

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           T I+GLCK G    A+E  R +     + D+  YN +IDGLCK   +  A  L+  +  +
Sbjct: 122 TLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAK 181

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
            +   VVTYN +I GLC   Q+  A  L   M    + P V  F  LI  F +  K  + 
Sbjct: 182 RICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEA 241

Query: 351 IELLHKMKEKKVMPDASIVSMVVD 374
             +   M ++ V P+    + ++D
Sbjct: 242 KNVFAVMMKEDVKPNIVTYNSLMD 265


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 196/363 (53%), Gaps = 2/363 (0%)

Query: 14  PNTVTYNTIIDGLCK-EGFVD-KAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           P  ++YN+++D + +  G V   A+ ++ +M    ++P+V TYN LI G C   +  +  
Sbjct: 175 PGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGL 234

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             F EM   G  P+VVT+N ++D  CK G++DEA  LL  M  + ++PN  +Y+ +++G 
Sbjct: 235 GCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGL 294

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A E+   M   G   D+V+YN L+NGYCK     +AL ++ EMV  G+ P+V
Sbjct: 295 CREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSV 354

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY  L   + +   +  A++ F++M+   +  +  TY T IDG  + G + EA  +   
Sbjct: 355 VTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNE 414

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +        +  YN  I G C   R+E AL + + +  + L  DVV+Y+ +I G C  G+
Sbjct: 415 MTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE 474

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A  +  +M E  V+P+ + + +LI G   + + ++  +L  +M +  + PD    + 
Sbjct: 475 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTT 534

Query: 372 VVD 374
           +++
Sbjct: 535 LIN 537



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/362 (33%), Positives = 197/362 (54%), Gaps = 3/362 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN ++YN II+GLC+EG + +A  +  +M  +   PD VTYN+L++G C   ++++A  
Sbjct: 281 QPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALV 340

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM+  GV PSVVT+  +++ +CK   ++ A    D M  R +RPN  TY+TL+DGF 
Sbjct: 341 IHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFS 400

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +N A  +   M   G     V+YN  I+G+C  + +EEAL + +EMV KG+ P VV
Sbjct: 401 RQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVV 460

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y+T+  G     +++ A ++ +EM    V+ D  TY++ I GLC+   + EA +L + +
Sbjct: 461 SYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEM 520

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +    D   Y  LI+  C  G L  AL L   +  +  + D VTY+++I+GL    + 
Sbjct: 521 LDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQART 580

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV--S 370
            +A  L   +      P+ + + TLI     I   S V+ L+     K +M +A  V  S
Sbjct: 581 REAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKS-VVALIKGFCMKGLMHEADRVFES 639

Query: 371 MV 372
           MV
Sbjct: 640 MV 641



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 183/354 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYNT+ID  CK G +D+A  L   M  + + P++++YN +I+GLC      EA 
Sbjct: 245 CLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAW 304

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  EM  +G  P  VT+N +++  CK G   +A  +   MV+  V P+  TY+ L++  
Sbjct: 305 EILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSM 364

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    +NRA E F  M   G + ++ +Y  LI+G+ +   + EA  +  EM   G  P+V
Sbjct: 365 CKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSV 424

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN    G   + ++E AL + +EM    +A D  +Y+T I G C+ G +  A ++ + 
Sbjct: 425 VTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQE 484

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D   Y+ LI GLC+  RL  A +L + +    L  D  TY  +I+  C +G 
Sbjct: 485 MVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGD 544

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++KA  L  +M      P+ + +  LI+G  +  +  +   LL K+  ++ +P 
Sbjct: 545 LNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPS 598



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 189/363 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN +I G C  G + K    F +M+     P+VVTYN+LI   C     +EA  L
Sbjct: 212 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 271

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +G+QP+++++NVI++ LC+ G M EA  +L+ M  +   P+  TY+TL++G+C 
Sbjct: 272 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 331

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  ++A  +   M   G     V+Y  LIN  CK + +  A+  + +M  +G++P   T
Sbjct: 332 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 391

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G      +  A ++  EM     +    TYN FI G C    + EA+ + + + 
Sbjct: 392 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 451

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+ +Y+ +I G C+ G L+ A ++ + +  + +  D VTY+ +I GLC   ++ 
Sbjct: 452 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 511

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A DL  +M +  + P+   + TLI+ +      +K + L  +M  K  +PDA   S+++
Sbjct: 512 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 571

Query: 374 DLL 376
           + L
Sbjct: 572 NGL 574



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 171/331 (51%), Gaps = 20/331 (6%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TY T+IDG  ++G +++A  +  +M     +P VVTYN+ IHG C      EA  
Sbjct: 386 RPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALG 445

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM+++G+ P VV+++ I+   C+ G++D A ++   MV++ V P+A TYS+L+ G C
Sbjct: 446 VVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLC 505

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++  A +L   M  MG   D+ +Y  LIN YC   ++ +AL L+ EM+ KG  P  V
Sbjct: 506 EMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAV 565

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L  GL +  +   A +L  ++  ++      TY+T I+  C N             
Sbjct: 566 TYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIEN-CSN------------- 611

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 ++ ++   LI G C  G +  A  +F S+  R        YN++IHG C  G +
Sbjct: 612 ------IEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNL 665

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            KA +L+ +M  +   P+ +  +TLI    +
Sbjct: 666 PKAFNLYKEMIHSGFVPHTVTVITLIKALFK 696



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 183/368 (49%), Gaps = 2/368 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE- 69
           V   ++  ++ ++        +D+A       K     P V++YNS++  +  +    + 
Sbjct: 137 VYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKL 196

Query: 70  -AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A+ ++ EM+   V P+V T+N+++   C  G++ +       M +    PN  TY+TL+
Sbjct: 197 SAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLI 256

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           D +C  G+I+ A  L  SM S G + + +SYN++ING C+   ++EA  +  EM  KG  
Sbjct: 257 DAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFT 316

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  VTYNTL  G  +      AL +  EM R+ V+    TY   I+ +CK   +  A+E 
Sbjct: 317 PDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEF 376

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  + I     + + Y  LIDG  + G L  A  +   +        VVTYN  IHG C 
Sbjct: 377 FDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCV 436

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
             +M++A  +  +M E  +AP+V+ + T+I GF R  +  +  ++  +M EK V PDA  
Sbjct: 437 LERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVT 496

Query: 369 VSMVVDLL 376
            S ++  L
Sbjct: 497 YSSLIQGL 504



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 15/111 (13%)

Query: 14  PNTVTYNTIID---------------GLCKEGFVDKAKALFLQMKGENINPDVVTYNSLI 58
           P+ VTY+T+I+               G C +G + +A  +F  M   N  P    YN +I
Sbjct: 597 PSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVII 656

Query: 59  HGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
           HG C   +  +A  L+ EM+  G  P  VT   ++  L K G  +E S ++
Sbjct: 657 HGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVI 707


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/401 (32%), Positives = 211/401 (52%), Gaps = 37/401 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +TYN II  LCK G +D+A   F +M  +N NPDV TY++L++GLC     +EA  
Sbjct: 195 QPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVF 254

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  +G  P+ VTFNV++D L KNG +  A++L+D M  +   PN  TY+TL+ G C
Sbjct: 255 LLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLC 314

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK+++A  L   M S  C  + V+Y  +ING  K +  E+ + +   M  +G K    
Sbjct: 315 LKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEY 374

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y++L  GLF+  + E+A++L++EM       +   Y  FIDGLC++    EA ++ + +
Sbjct: 375 IYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEM 434

Query: 253 -----------------GILK------------------CELDIQAYNCLIDGLCKSGRL 277
                            G  K                     ++   + L++GLC+SGRL
Sbjct: 435 LSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRL 494

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM--EENAVAPNVIIFV 335
             AL ++  +    L  DVV Y+ MI GLC+ G +DK   LF +M  +E    P+V+ + 
Sbjct: 495 REALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYN 554

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            L +   R +  ++ I+LL+ M ++   PD+   ++ ++ L
Sbjct: 555 ILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 595



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 196/405 (48%), Gaps = 40/405 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN---INPDVVTYNSLIHGLCHANDWN 68
           CK    ++N++++ + +EG    A   +L + G N     P+++TYN +I  LC     +
Sbjct: 156 CKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQID 215

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A   F EM  +   P V T++ +M+ LCK  ++DEA  LLD M      PN  T++ L+
Sbjct: 216 RAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLI 275

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           D     G ++RA +L  +M   GC  ++V+YN LI+G C   ++++ALSL  +MVS    
Sbjct: 276 DALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCV 335

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  VTY T+  GL +  + E  + +   M+     A+   Y++ I GL K G    AV L
Sbjct: 336 PNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRL 395

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY--------- 299
           ++ +    C+ ++  Y   IDGLC+  + + A ++ + +  +  + +  TY         
Sbjct: 396 WKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFK 455

Query: 300 --------------------------NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
                                     +++++GLC  G++ +A  ++  M    + P+V+ 
Sbjct: 456 KGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVA 515

Query: 334 FVTLIHGFVRINKPSKVIELLHKM--KEKKVMPDASIVSMVVDLL 376
           + ++I G   +    K ++L ++M  +E K  PD    +++ + L
Sbjct: 516 YSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNAL 560



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 130/259 (50%), Gaps = 23/259 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN V Y   IDGLC++   D+A+ +  +M  +   P+  TY+SL+ G     D  +A 
Sbjct: 404 CKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAI 463

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            ++ EMM Q ++ +VV  +V+++ LC++G++ EA  +   M+   ++P+   YS+++ G 
Sbjct: 464 LVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGL 523

Query: 132 CLTGKINRAEELFGSMESMGCKH--DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           C  G +++  +LF  M+    K   D V+YNIL N  C+   +  A+ L   M+ +G  P
Sbjct: 524 CDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDP 583

Query: 190 TVVTYN----------------TLFLG-----LFEIHQVEHALKLFEEMQRDDVAADTST 228
             +T N                 LFL      L +  +   AL++ EEM    +  + ST
Sbjct: 584 DSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPST 643

Query: 229 YNTFIDGLCKNGYIVEAVE 247
           ++  I   CK   I E ++
Sbjct: 644 WSRVIQRTCKPKRIRETID 662



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 23/153 (15%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE--NINPDVVTYNSLIHGLCHAN 65
           +G   KP+ V Y+++I GLC  G VDK   LF +M+ +     PDVVTYN L + LC  +
Sbjct: 505 LGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQD 564

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL------CKNGK--MDE------------- 104
           +   A  L   M+D+G  P  +T N+ ++ L       ++G+  +DE             
Sbjct: 565 NLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLS 624

Query: 105 ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           A R+++ M+ R + P   T+S ++   C   +I
Sbjct: 625 ALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRI 657


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 196/364 (53%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN +++ LCK G +++AK +  QM      PD+ T+N+LI  LC  N   EA  L
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++  +GV P V TFN++++ LCK G    A RL + M      P+  TY+TL+D  C 
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+ +A +L   MES GC    ++YN +I+G CK   +EEA  ++ +M  +GI    +T
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +NTL  GL +  +++ A +L  +M  + +  +  TYN+ +   CK G I +A ++  T+ 
Sbjct: 499 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 558

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E+D+  Y  LI+GLCK+GR ++AL++ R +  + +      YN ++  L     + 
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIR 618

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK-VIELLHKMKEKKVMPDASIVSMV 372
            A  LF +M E    P+ + +  +  G  R   P K   + + +M +K  +P+ S   M+
Sbjct: 619 DALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRML 678

Query: 373 VDLL 376
            + L
Sbjct: 679 AEGL 682



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 191/365 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C    VT N +I+G CK G V+ A     Q   +   PD +TYN+ ++GLC  +    A 
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++   M+ +G  P V T+N++++ LCKNG+++EA  +L+ MV R   P+  T++TL+   
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++  A +L   +   G   D  ++NILIN  CK  +   AL L+ EM + G  P  
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL   L  + ++  AL L ++M+       T TYNT IDGLCK   I EA E+F  
Sbjct: 427 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +     +   +N LIDGLCK  +++ A EL   +    L  + +TYN ++   C  G 
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 546

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + KA D+   M  N    +V+ + TLI+G  +  +    +++L  M+ K + P     + 
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 606

Query: 372 VVDLL 376
           V+  L
Sbjct: 607 VLQSL 611



 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 184/350 (52%), Gaps = 1/350 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  T+NT+I  LC    +++A  L  Q+  + ++PDV T+N LI+ LC   D + A 
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RLF EM + G  P  VT+N ++D LC  GK+ +A  LL  M       +  TY+T++DG 
Sbjct: 412 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 471

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +I  AEE+F  M+  G   + +++N LI+G CK+K++++A  L  +M+S+G++P  
Sbjct: 472 CKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNN 531

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYN++     +   ++ A  + E M  +    D  TY T I+GLCK G    A+++ R 
Sbjct: 532 ITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRG 591

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC-NDG 310
           + I       +AYN ++  L +   +  AL LFR +       D +TY I+  GLC   G
Sbjct: 592 MRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGG 651

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            + +A D  L+M +    P    F  L  G + +      I  +  + EK
Sbjct: 652 PIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEK 701



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 191/366 (52%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           EI    +P+ +TYNT ++GLC+   V  A  +   M  E  +PDV TYN +++ LC    
Sbjct: 277 EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 336

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             EAK +  +M+D+G  P + TFN ++  LC   +++EA  L   +  + V P+ +T++ 
Sbjct: 337 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L++  C  G  + A  LF  M++ GC  D+V+YN LI+  C   ++ +AL L ++M S G
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
              + +TYNT+  GL +  ++E A ++F++M    ++ +  T+NT IDGLCK+  I +A 
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           EL   +     + +   YN ++   CK G ++ A ++  ++       DVVTY  +I+GL
Sbjct: 517 ELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C  G+   A  +   M    + P    +  ++    R N     + L  +M E    PDA
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636

Query: 367 SIVSMV 372
               +V
Sbjct: 637 LTYKIV 642



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/323 (35%), Positives = 173/323 (53%), Gaps = 1/323 (0%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           I  D V YN L++ L   +     + ++ EM  +G++P VVTFN +M  LC+  ++  A 
Sbjct: 142 IQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 201

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
            +L+ M  R V P+  T++TLM GF   G I  A  +   M  MGC    V+ N+LINGY
Sbjct: 202 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 261

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           CK   VE+AL   ++ ++ G +P  +TYNT   GL +   V HALK+ + M ++    D 
Sbjct: 262 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 321

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            TYN  ++ LCKNG + EA  +   +    C  DI  +N LI  LC   RLE AL+L R 
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQ 381

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +  + +  DV T+NI+I+ LC  G    A  LF +M+ +   P+ + + TLI     + K
Sbjct: 382 VTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441

Query: 347 PSKVIELLHKMKEKKVMPDASIV 369
             K ++LL  M E    P ++I 
Sbjct: 442 LGKALDLLKDM-ESTGCPRSTIT 463



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 180/344 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+ T++ G  +EG ++ A  +  +M     +   VT N LI+G C      +A   
Sbjct: 214 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGY 273

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             + +  G +P  +T+N  ++ LC+N  +  A +++D+MVQ    P+ FTY+ +++  C 
Sbjct: 274 IQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK 333

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A+ +   M   GC  D  ++N LI   C    +EEAL L R++  KG+ P V T
Sbjct: 334 NGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYT 393

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L   L ++     AL+LFEEM+      D  TYNT ID LC  G + +A++L + + 
Sbjct: 394 FNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDME 453

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C      YN +IDGLCK  R+E A E+F  +  + +  + +T+N +I GLC D ++D
Sbjct: 454 STGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKID 513

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            A +L   M    + PN I + +++  + +     K  ++L  M
Sbjct: 514 DAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557



 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 182/353 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VT+NT++  LC+   V  A  +  +M    + PD  T+ +L+ G         A R
Sbjct: 178 KPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALR 237

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M++ G   + VT NV+++  CK G++++A   +   +     P+  TY+T ++G C
Sbjct: 238 VKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLC 297

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +  A ++   M   G   D  +YNI++N  CKN ++EEA  +  +MV +G  P + 
Sbjct: 298 QNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDIT 357

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL   L   +++E AL L  ++    V+ D  T+N  I+ LCK G    A+ LF  +
Sbjct: 358 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D   YN LID LC  G+L  AL+L + +         +TYN +I GLC   ++
Sbjct: 418 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 477

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++A ++F  M+   ++ N I F TLI G  +  K     EL+++M  + + P+
Sbjct: 478 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPN 530



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 186/367 (50%), Gaps = 6/367 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + +TV YN +++ L +   +   ++++ +M    I PDVVT+N+L+  LC A+    A  
Sbjct: 143 QADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVL 202

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM  +GV P   TF  +M    + G ++ A R+   M++        T + L++G+C
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262

Query: 133 LTGKINRAEELFGSME---SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
              K+ R E+  G ++   + G + D ++YN  +NG C+N  V  AL +   MV +G  P
Sbjct: 263 ---KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V TYN +   L +  Q+E A  +  +M       D +T+NT I  LC    + EA++L 
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           R + +     D+  +N LI+ LCK G   +AL LF  +       D VTYN +I  LC+ 
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++ KA DL  DME      + I + T+I G  +  +  +  E+  +M  + +  +A   
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499

Query: 370 SMVVDLL 376
           + ++D L
Sbjct: 500 NTLIDGL 506



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 172/363 (47%), Gaps = 2/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    Y  II  L   G +D  K L  +M+ E     +   +S +        +++A  L
Sbjct: 72  PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131

Query: 74  FFEMMDQ--GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
               +    G+Q   V +N +++ L +  KM     +   M  R ++P+  T++TLM   
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++  A  +   M S G   D+ ++  L+ G+ +   +E AL +   M+  G   T 
Sbjct: 192 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT N L  G  ++ +VE AL   ++   D    D  TYNTF++GLC+N ++  A+++   
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D+  YN +++ LCK+G+LE A  +   +  R  + D+ T+N +I  LC   +
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A DL   +    V+P+V  F  LI+   ++  P   + L  +MK     PD    + 
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431

Query: 372 VVD 374
           ++D
Sbjct: 432 LID 434


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 196/364 (53%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN +++ LCK G +++AK +  QM      PD+ T+N+LI  LC  N   EA  L
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++  +GV P V TFN++++ LCK G    A RL + M      P+  TY+TL+D  C 
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+ +A +L   MES GC    ++YN +I+G CK   +EEA  ++ +M  +GI    +T
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +NTL  GL +  +++ A +L  +M  + +  +  TYN+ +   CK G I +A ++  T+ 
Sbjct: 499 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 558

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E+D+  Y  LI+GLCK+GR ++AL++ R +  + +      YN ++  L     + 
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIR 618

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK-VIELLHKMKEKKVMPDASIVSMV 372
            A  LF +M E    P+ + +  +  G  R   P K   + + +M +K  +P+ S   M+
Sbjct: 619 DALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRML 678

Query: 373 VDLL 376
            + L
Sbjct: 679 AEGL 682



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 191/365 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C    VT N +I+G CK G V+ A     Q   +   PD +TYN+ ++GLC  +    A 
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++   M+ +G  P V T+N++++ LCKNG+++EA  +L+ MV R   P+  T++TL+   
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++  A +L   +   G   D  ++NILIN  CK  +   AL L+ EM + G  P  
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL   L  + ++  AL L ++M+       T TYNT IDGLCK   I EA E+F  
Sbjct: 427 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +     +   +N LIDGLCK  +++ A EL   +    L  + +TYN ++   C  G 
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 546

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + KA D+   M  N    +V+ + TLI+G  +  +    +++L  M+ K + P     + 
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 606

Query: 372 VVDLL 376
           V+  L
Sbjct: 607 VLQSL 611



 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 184/350 (52%), Gaps = 1/350 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  T+NT+I  LC    +++A  L  Q+  + ++PDV T+N LI+ LC   D + A 
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RLF EM + G  P  VT+N ++D LC  GK+ +A  LL  M       +  TY+T++DG 
Sbjct: 412 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 471

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +I  AEE+F  M+  G   + +++N LI+G CK+K++++A  L  +M+S+G++P  
Sbjct: 472 CKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNN 531

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYN++     +   ++ A  + E M  +    D  TY T I+GLCK G    A+++ R 
Sbjct: 532 ITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRG 591

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC-NDG 310
           + I       +AYN ++  L +   +  AL LFR +       D +TY I+  GLC   G
Sbjct: 592 MRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGG 651

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            + +A D  L+M +    P    F  L  G + +      I  +  + EK
Sbjct: 652 PIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEK 701



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 191/366 (52%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           EI    +P+ +TYNT ++GLC+   V  A  +   M  E  +PDV TYN +++ LC    
Sbjct: 277 EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 336

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             EAK +  +M+D+G  P + TFN ++  LC   +++EA  L   +  + V P+ +T++ 
Sbjct: 337 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L++  C  G  + A  LF  M++ GC  D+V+YN LI+  C   ++ +AL L ++M S G
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
              + +TYNT+  GL +  ++E A ++F++M    ++ +  T+NT IDGLCK+  I +A 
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           EL   +     + +   YN ++   CK G ++ A ++  ++       DVVTY  +I+GL
Sbjct: 517 ELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C  G+   A  +   M    + P    +  ++    R N     + L  +M E    PDA
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636

Query: 367 SIVSMV 372
               +V
Sbjct: 637 LTYKIV 642



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/323 (35%), Positives = 173/323 (53%), Gaps = 1/323 (0%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           I  D V YN L++ L   +     + ++ EM  +G++P VVTFN +M  LC+  ++  A 
Sbjct: 142 IQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 201

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
            +L+ M  R V P+  T++TLM GF   G I  A  +   M  MGC    V+ N+LINGY
Sbjct: 202 IMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 261

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           CK   VE+AL   ++ ++ G +P  +TYNT   GL +   V HALK+ + M ++    D 
Sbjct: 262 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 321

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            TYN  ++ LCKNG + EA  +   +    C  DI  +N LI  LC   RLE AL+L R 
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQ 381

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +  + +  DV T+NI+I+ LC  G    A  LF +M+ +   P+ + + TLI     + K
Sbjct: 382 VTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441

Query: 347 PSKVIELLHKMKEKKVMPDASIV 369
             K ++LL  M E    P ++I 
Sbjct: 442 LGKALDLLKDM-ESTGCPRSTIT 463



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 180/344 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+ T++ G  +EG ++ A  +  +M     +   VT N LI+G C      +A   
Sbjct: 214 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGY 273

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             + +  G +P  +T+N  ++ LC+N  +  A +++D+MVQ    P+ FTY+ +++  C 
Sbjct: 274 IQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK 333

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A+ +   M   GC  D  ++N LI   C    +EEAL L R++  KG+ P V T
Sbjct: 334 NGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYT 393

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L   L ++     AL+LFEEM+      D  TYNT ID LC  G + +A++L + + 
Sbjct: 394 FNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDME 453

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C      YN +IDGLCK  R+E A E+F  +  + +  + +T+N +I GLC D ++D
Sbjct: 454 STGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKID 513

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            A +L   M    + PN I + +++  + +     K  ++L  M
Sbjct: 514 DAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 182/353 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VT+NT++  LC+   V  A  +  +M    + PD  T+ +L+ G         A R
Sbjct: 178 KPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALR 237

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M++ G   + VT NV+++  CK G++++A   +   +     P+  TY+T ++G C
Sbjct: 238 VKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLC 297

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +  A ++   M   G   D  +YNI++N  CKN ++EEA  +  +MV +G  P + 
Sbjct: 298 QNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDIT 357

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL   L   +++E AL L  ++    V+ D  T+N  I+ LCK G    A+ LF  +
Sbjct: 358 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D   YN LID LC  G+L  AL+L + +         +TYN +I GLC   ++
Sbjct: 418 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 477

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++A ++F  M+   ++ N I F TLI G  +  K     EL+++M  + + P+
Sbjct: 478 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPN 530



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 186/367 (50%), Gaps = 6/367 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + +TV YN +++ L +   +   ++++ +M    I PDVVT+N+L+  LC A+    A  
Sbjct: 143 QADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVI 202

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM  +GV P   TF  +M    + G ++ A R+   M++        T + L++G+C
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262

Query: 133 LTGKINRAEELFGSME---SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
              K+ R E+  G ++   + G + D ++YN  +NG C+N  V  AL +   MV +G  P
Sbjct: 263 ---KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V TYN +   L +  Q+E A  +  +M       D +T+NT I  LC    + EA++L 
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           R + +     D+  +N LI+ LCK G   +AL LF  +       D VTYN +I  LC+ 
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++ KA DL  DME      + I + T+I G  +  +  +  E+  +M  + +  +A   
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499

Query: 370 SMVVDLL 376
           + ++D L
Sbjct: 500 NTLIDGL 506



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 172/363 (47%), Gaps = 2/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    Y  II  L   G +D  K L  +M+ E     +   +S +        +++A  L
Sbjct: 72  PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131

Query: 74  FFEMMDQ--GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
               +    G+Q   V +N +++ L +  KM     +   M  R ++P+  T++TLM   
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++  A  +   M S G   D+ ++  L+ G+ +   +E AL +   M+  G   T 
Sbjct: 192 CRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT N L  G  ++ +VE AL   ++   D    D  TYNTF++GLC+N ++  A+++   
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D+  YN +++ LCK+G+LE A  +   +  R  + D+ T+N +I  LC   +
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A DL   +    V+P+V  F  LI+   ++  P   + L  +MK     PD    + 
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431

Query: 372 VVD 374
           ++D
Sbjct: 432 LID 434


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 196/364 (53%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN +++ LCK G +++AK +  QM      PD+ T+N+LI  LC  N   EA  L
Sbjct: 227 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 286

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++  +GV P V TFN++++ LCK G    A RL + M      P+  TY+TL+D  C 
Sbjct: 287 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 346

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+ +A +L   MES GC    ++YN +I+G CK   +EEA  ++ +M  +GI    +T
Sbjct: 347 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 406

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +NTL  GL +  +++ A +L  +M  + +  +  TYN+ +   CK G I +A ++  T+ 
Sbjct: 407 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 466

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E+D+  Y  LI+GLCK+GR ++AL++ R +  + +      YN ++  L     + 
Sbjct: 467 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIR 526

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK-VIELLHKMKEKKVMPDASIVSMV 372
            A  LF +M E    P+ + +  +  G  R   P K   + + +M +K  +P+ S   M+
Sbjct: 527 DALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRML 586

Query: 373 VDLL 376
            + L
Sbjct: 587 AEGL 590



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 191/365 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C    VT N +I+G CK G V+ A     Q   +   PD +TYN+ ++GLC  +    A 
Sbjct: 155 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 214

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++   M+ +G  P V T+N++++ LCKNG+++EA  +L+ MV R   P+  T++TL+   
Sbjct: 215 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 274

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++  A +L   +   G   D  ++NILIN  CK  +   AL L+ EM + G  P  
Sbjct: 275 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 334

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL   L  + ++  AL L ++M+       T TYNT IDGLCK   I EA E+F  
Sbjct: 335 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 394

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +     +   +N LIDGLCK  +++ A EL   +    L  + +TYN ++   C  G 
Sbjct: 395 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 454

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + KA D+   M  N    +V+ + TLI+G  +  +    +++L  M+ K + P     + 
Sbjct: 455 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 514

Query: 372 VVDLL 376
           V+  L
Sbjct: 515 VLQSL 519



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 184/350 (52%), Gaps = 1/350 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  T+NT+I  LC    +++A  L  Q+  + ++PDV T+N LI+ LC   D + A 
Sbjct: 260 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 319

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RLF EM + G  P  VT+N ++D LC  GK+ +A  LL  M       +  TY+T++DG 
Sbjct: 320 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 379

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +I  AEE+F  M+  G   + +++N LI+G CK+K++++A  L  +M+S+G++P  
Sbjct: 380 CKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNN 439

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYN++     +   ++ A  + E M  +    D  TY T I+GLCK G    A+++ R 
Sbjct: 440 ITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRG 499

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC-NDG 310
           + I       +AYN ++  L +   +  AL LFR +       D +TY I+  GLC   G
Sbjct: 500 MRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGG 559

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            + +A D  L+M +    P    F  L  G + +      I  +  + EK
Sbjct: 560 PIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEK 609



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 191/366 (52%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           EI    +P+ +TYNT ++GLC+   V  A  +   M  E  +PDV TYN +++ LC    
Sbjct: 185 EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 244

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             EAK +  +M+D+G  P + TFN ++  LC   +++EA  L   +  + V P+ +T++ 
Sbjct: 245 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 304

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L++  C  G  + A  LF  M++ GC  D+V+YN LI+  C   ++ +AL L ++M S G
Sbjct: 305 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 364

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
              + +TYNT+  GL +  ++E A ++F++M    ++ +  T+NT IDGLCK+  I +A 
Sbjct: 365 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 424

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           EL   +     + +   YN ++   CK G ++ A ++  ++       DVVTY  +I+GL
Sbjct: 425 ELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 484

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C  G+   A  +   M    + P    +  ++    R N     + L  +M E    PDA
Sbjct: 485 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 544

Query: 367 SIVSMV 372
               +V
Sbjct: 545 LTYKIV 550



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/323 (35%), Positives = 173/323 (53%), Gaps = 1/323 (0%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           I  D V YN L++ L   +     + ++ EM  +G++P VVTFN +M  LC+  ++  A 
Sbjct: 50  IQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 109

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
            +L+ M  R V P+  T++TLM GF   G I  A  +   M  MGC    V+ N+LINGY
Sbjct: 110 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 169

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           CK   VE+AL   ++ ++ G +P  +TYNT   GL +   V HALK+ + M ++    D 
Sbjct: 170 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 229

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            TYN  ++ LCKNG + EA  +   +    C  DI  +N LI  LC   RLE AL+L R 
Sbjct: 230 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQ 289

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +  + +  DV T+NI+I+ LC  G    A  LF +M+ +   P+ + + TLI     + K
Sbjct: 290 VTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 349

Query: 347 PSKVIELLHKMKEKKVMPDASIV 369
             K ++LL  M E    P ++I 
Sbjct: 350 LGKALDLLKDM-ESTGCPRSTIT 371



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 180/344 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+ T++ G  +EG ++ A  +  +M     +   VT N LI+G C      +A   
Sbjct: 122 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGY 181

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             + +  G +P  +T+N  ++ LC+N  +  A +++D+MVQ    P+ FTY+ +++  C 
Sbjct: 182 IQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK 241

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A+ +   M   GC  D  ++N LI   C    +EEAL L R++  KG+ P V T
Sbjct: 242 NGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYT 301

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L   L ++     AL+LFEEM+      D  TYNT ID LC  G + +A++L + + 
Sbjct: 302 FNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDME 361

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C      YN +IDGLCK  R+E A E+F  +  + +  + +T+N +I GLC D ++D
Sbjct: 362 STGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKID 421

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            A +L   M    + PN I + +++  + +     K  ++L  M
Sbjct: 422 DAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 465



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 182/353 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VT+NT++  LC+   V  A  +  +M    + PD  T+ +L+ G         A R
Sbjct: 86  KPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALR 145

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M++ G   + VT NV+++  CK G++++A   +   +     P+  TY+T ++G C
Sbjct: 146 VKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLC 205

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +  A ++   M   G   D  +YNI++N  CKN ++EEA  +  +MV +G  P + 
Sbjct: 206 QNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDIT 265

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL   L   +++E AL L  ++    V+ D  T+N  I+ LCK G    A+ LF  +
Sbjct: 266 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 325

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D   YN LID LC  G+L  AL+L + +         +TYN +I GLC   ++
Sbjct: 326 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 385

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++A ++F  M+   ++ N I F TLI G  +  K     EL+++M  + + P+
Sbjct: 386 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPN 438



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 186/367 (50%), Gaps = 6/367 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + +TV YN +++ L +   +   ++++ +M    I PDVVT+N+L+  LC A+    A  
Sbjct: 51  QADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVL 110

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM  +GV P   TF  +M    + G ++ A R+   M++        T + L++G+C
Sbjct: 111 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 170

Query: 133 LTGKINRAEELFGSME---SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
              K+ R E+  G ++   + G + D ++YN  +NG C+N  V  AL +   MV +G  P
Sbjct: 171 ---KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 227

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V TYN +   L +  Q+E A  +  +M       D +T+NT I  LC    + EA++L 
Sbjct: 228 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 287

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           R + +     D+  +N LI+ LCK G   +AL LF  +       D VTYN +I  LC+ 
Sbjct: 288 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 347

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++ KA DL  DME      + I + T+I G  +  +  +  E+  +M  + +  +A   
Sbjct: 348 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 407

Query: 370 SMVVDLL 376
           + ++D L
Sbjct: 408 NTLIDGL 414



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 161/325 (49%), Gaps = 10/325 (3%)

Query: 60  GLCHAN-DWNEAKRLFFEMMDQ---------GVQPSVVTFNVIMDELCKNGKMDEASRLL 109
           G+ H+  D  E ++LF + +D          G+Q   V +N +++ L +  KM     + 
Sbjct: 18  GVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVY 77

Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
             M  R ++P+  T++TLM   C   ++  A  +   M S G   D+ ++  L+ G+ + 
Sbjct: 78  SEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEE 137

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
             +E AL +   M+  G   T VT N L  G  ++ +VE AL   ++   D    D  TY
Sbjct: 138 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 197

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           NTF++GLC+N ++  A+++   +     + D+  YN +++ LCK+G+LE A  +   +  
Sbjct: 198 NTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVD 257

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
           R  + D+ T+N +I  LC   ++++A DL   +    V+P+V  F  LI+   ++  P  
Sbjct: 258 RGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHL 317

Query: 350 VIELLHKMKEKKVMPDASIVSMVVD 374
            + L  +MK     PD    + ++D
Sbjct: 318 ALRLFEEMKNSGCTPDEVTYNTLID 342


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 200/364 (54%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVT+ T+I  LC+ G +D A   F  M    + P    Y  LI G C+  +  +AK L
Sbjct: 379 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKEL 438

Query: 74  FFEMMDQGVQPSVVT-FNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             EMM++ + P  V  F+ I++ LCK G++ E   ++D+MVQ   RPN  T+++LM+G+C
Sbjct: 439 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYC 498

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G +  A  L  +M S+G + +   Y  L++GYCKN  +++AL+++R+M+ KG+KPT V
Sbjct: 499 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 558

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ +  GLF+  +   A K+F EM          TY   + GLC+N    EA  L   L
Sbjct: 559 LYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 618

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  + DI  +N +I  + K GR + A ELF ++    LV ++ TY++MI  L  +   
Sbjct: 619 FAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESY 678

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A +LF+ +E++  A +  +   ++   +   + +K    L  + E  +  +AS +S++
Sbjct: 679 EEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLL 738

Query: 373 VDLL 376
             L 
Sbjct: 739 ASLF 742



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 198/399 (49%), Gaps = 39/399 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +Y ++I G  K+G VDKA  LFL+M  + + P ++  NS+I  LC   + ++A+ +
Sbjct: 133 PDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI 191

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+D G+ P + T+++I+D LCK+  MD+A R+L+ MV+   RPN+ TY++L+ G+ +
Sbjct: 192 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 251

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G  N +  +F  M S G      + N  I+   K+    EA  ++  MV KG KP +++
Sbjct: 252 SGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIIS 311

Query: 194 YNTLFLG--------LFEIHQV-----------------------------EHALKLFEE 216
           Y+T+  G        L ++H +                             + A+ +FE+
Sbjct: 312 YSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 371

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           MQ   +  DT T+ T I  LC+ G + +A+  F  +  +        Y CLI G C  G 
Sbjct: 372 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE 431

Query: 277 LEIALELFRSLPRRVLVADVVTY-NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           L  A EL   +  + +    V Y + +I+ LC +G++ +  D+   M +    PNV+ F 
Sbjct: 432 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 491

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +L+ G+  +    +   LL  M    + P+  I   +VD
Sbjct: 492 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 530



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 174/351 (49%), Gaps = 3/351 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN++TYN++I G    G  +++  +F QM    + P V   NS IH L      NEAK 
Sbjct: 236 RPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKC 295

Query: 73  LFFEMMDQGVQPSVVTFNVIMD--ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           +F  M+ +G +P +++++ ++       +  + +   + +LM+ + + PN   ++ L++ 
Sbjct: 296 IFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINA 355

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G +++A  +F  M++ G   D V++  +I+  C+   +++AL  +  MV  G+ P+
Sbjct: 356 YARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPS 415

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY-NTFIDGLCKNGYIVEAVELF 249
              Y  L  G     ++  A +L  EM   D+      Y ++ I+ LCK G + E  ++ 
Sbjct: 416 EAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIM 475

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +       ++  +N L++G C  G +E A  L  ++    +  +   Y  ++ G C +
Sbjct: 476 DMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 535

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           G++D A  +F DM    V P  +++  ++HG  +  + +   ++ H+M E 
Sbjct: 536 GRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 586



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 159/320 (49%), Gaps = 3/320 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTY-NSLIHGLCHAN 65
           +IGV   P+   Y  +I G C  G + KAK L  +M  ++I P  V Y +S+I+ LC   
Sbjct: 409 DIGV--PPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEG 466

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
              E K +   M+  G +P+VVTFN +M+  C  G M+EA  LLD M    + PN + Y 
Sbjct: 467 RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 526

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+DG+C  G+I+ A  +F  M   G K   V Y+I+++G  + +    A  ++ EM+  
Sbjct: 527 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 586

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G   ++ TY  +  GL   +  + A  L E++   +V  D  T+N  I  + K G   EA
Sbjct: 587 GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 646

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            ELF  +       +IQ Y+ +I  L K    E A  LF S+ +    +D    N ++  
Sbjct: 647 KELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRM 706

Query: 306 LCNDGQMDKAHDLFLDMEEN 325
           L N  ++ KA +    + EN
Sbjct: 707 LLNKAEVAKASNYLSIIGEN 726



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 148/295 (50%), Gaps = 3/295 (1%)

Query: 84  PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEEL 143
           P++ T+N+++D   +  + D    ++  +++  + P+ F+YS L+ GF   G++++A  L
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 156

Query: 144 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 203
           F  M   G     +  N +I   CK KE+++A S+ ++MV  GI P + TY+ +  GL +
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216

Query: 204 IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQA 263
              ++ A ++ E+M       ++ TYN+ I G   +G   E+V +F+ +        +  
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN--DGQMDKAHDLFLD 321
            N  I  L K GR   A  +F S+  +    D+++Y+ M+HG     D  +   H++F  
Sbjct: 277 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 336

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           M    +APN  +F  LI+ + R     K + +   M+ K ++PD    + V+  L
Sbjct: 337 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 391



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 131/276 (47%), Gaps = 3/276 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VT+N++++G C  G +++A AL   M    I P+   Y +L+ G C     ++A  
Sbjct: 484 RPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALT 543

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +M+ +GV+P+ V +++I+  L +  +   A ++   M++     +  TY  ++ G C
Sbjct: 544 VFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLC 603

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                + A  L   + +M  K D +++NI+I+   K    +EA  L+  + + G+ P + 
Sbjct: 604 RNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQ 663

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ +   L +    E A  LF  +++   A+D+   N  +  L     + +A      +
Sbjct: 664 TYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSII 723

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           G     L+    + L     + G ++    LF + P
Sbjct: 724 GENNLTLEASTISLLASLFSREGMIK---GLFGTAP 756


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 114/318 (35%), Positives = 180/318 (56%), Gaps = 1/318 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+  TY+T+I  LC+ G +  A   F QM G  + P+ V Y+SLI G C   D  +AK 
Sbjct: 323 SPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKE 382

Query: 73  LFFEMMDQGV-QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           L +EMM+ G+ +P++  FN I+  +CK G++ +A  + DL+     R +   ++TL+DG+
Sbjct: 383 LVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGY 442

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           CL G++ +A  +  +M S G   D  +YN L+NGY K+  +++ L+L+REM  K IKPT 
Sbjct: 443 CLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTT 502

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN +  GLF   +   A K+  EM          TYN  + GLC+N    EA+ +F+ 
Sbjct: 503 VTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQK 562

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L  +  + +I   N +I+ +    R E A +LF ++    LV +  TY IMI  L  +G 
Sbjct: 563 LCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGS 622

Query: 312 MDKAHDLFLDMEENAVAP 329
           +++A ++F  ME++  AP
Sbjct: 623 VEEADNMFSSMEKSGCAP 640



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 200/404 (49%), Gaps = 40/404 (9%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA------ 64
           VC P+ VTYNT+I G  KEG + KA  L+ +M  +   PDVVT+NS+I+ LC A      
Sbjct: 111 VCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNA 170

Query: 65  -----------------------------NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDE 95
                                          W EA ++F EM  +G+ P +V++N  MD 
Sbjct: 171 ELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDS 230

Query: 96  LCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHD 155
           LCK+G+  EA+ +   M  +  RPN  TY  L+ G+   G        F +M+  G   +
Sbjct: 231 LCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVAN 290

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
            + + ILI+ Y K   ++EA+ +  EM  +G+ P V TY+TL   L  + ++  A+  F 
Sbjct: 291 CLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFN 350

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLC 272
           +M    V  +T  Y++ I G C +G +V+A EL   +   GI +   +I  +N ++  +C
Sbjct: 351 QMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPR--PNIAFFNSIVHSIC 408

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           K GR+  A  +F  +      +D++ +N +I G C  G+M KA  +   M    + P+  
Sbjct: 409 KEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTF 468

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            + TL++G+ +  +    + L  +M +KK+ P     ++++D L
Sbjct: 469 TYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGL 512



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 189/363 (52%), Gaps = 1/363 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N + +  +ID   K G +D+A  +  +M+G+ ++PDV TY++LI  LC      +A   F
Sbjct: 290 NCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKF 349

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV-RPNAFTYSTLMDGFCL 133
            +M+  GVQP+ V ++ ++   C +G + +A  L+  M+   + RPN   +++++   C 
Sbjct: 350 NQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICK 409

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A  +F  ++ +G + D + +N LI+GYC   E+ +A S+   M+S GI P   T
Sbjct: 410 EGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFT 469

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G F+  +++  L LF EM    +   T TYN  +DGL + G  V A ++   + 
Sbjct: 470 YNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMI 529

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                + +  YN ++ GLC++   + A+ +F+ L    +  ++ T N MI+ +    + +
Sbjct: 530 GCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRRE 589

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A DLF  + ++ + PN   +  +I   ++     +   +   M++    P + +++  +
Sbjct: 590 EAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTI 649

Query: 374 DLL 376
             L
Sbjct: 650 RTL 652



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 177/361 (49%), Gaps = 3/361 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           V  P   TY  +++G C+    +   A F ++    +  D    N+++  LC     ++A
Sbjct: 3   VAPPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDA 62

Query: 71  -KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD--VRPNAFTYSTL 127
            K L   M + G  P   ++ +++  LC + +  +A  LL +M + +    P+  TY+T+
Sbjct: 63  VKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTV 122

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + GF   GKI +A  L+  M   G   D V++N +IN  CK + V+ A  L R+MV  G+
Sbjct: 123 IHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGV 182

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P  VTY ++  G   + + E A K+F EM    +  D  ++N+F+D LCK+G   EA E
Sbjct: 183 PPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAE 242

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +F ++       +I  Y  L+ G    G     +  F ++    +VA+ + + I+I    
Sbjct: 243 IFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYA 302

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G MD+A  +  +M+   ++P+V  + TLI    R+ + +  ++  ++M    V P+  
Sbjct: 303 KRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTV 362

Query: 368 I 368
           +
Sbjct: 363 V 363



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 164/331 (49%), Gaps = 3/331 (0%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR- 107
           P + TY  +++G C A         F  ++  G++      N ++  LC   + D+A + 
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM--ESMGCKHDDVSYNILING 165
           LL  M +    P+AF+Y+ ++   C   +  +A +L   M  E   C  D V+YN +I+G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
           + K  ++ +A +LY EM+ +G  P VVT+N++   L +   V++A  L  +M  + V  +
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
             TY + I G    G   EA ++FR +       DI ++N  +D LCK GR + A E+F 
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
           S+  +    ++VTY I++HG   +G        F  M+ + +  N ++F  LI  + +  
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 346 KPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              + + +L +M+ + + PD    S ++  L
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISAL 336



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 145/309 (46%), Gaps = 36/309 (11%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENI-NPDVVTYNSLIHGLCH 63
           N  IG   +PNTV Y+++I G C  G + KAK L  +M    I  P++  +NS++H +C 
Sbjct: 350 NQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICK 409

Query: 64  ANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
                +A  +F  + D G +  ++ FN ++D  C  G+M +A  +LD M+   + P+ FT
Sbjct: 410 EGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFT 469

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILIN------------------- 164
           Y+TL++G+  +G+I+    LF  M     K   V+YNI+++                   
Sbjct: 470 YNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMI 529

Query: 165 ----------------GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 208
                           G C+N   +EA+ +++++ +  +K  + T NT+   ++ + + E
Sbjct: 530 GCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRRE 589

Query: 209 HALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLI 268
            A  LF  +    +  + STY   I  L K G + EA  +F ++    C    +  N  I
Sbjct: 590 EAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTI 649

Query: 269 DGLCKSGRL 277
             L + G +
Sbjct: 650 RTLLEKGEI 658



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 116/233 (49%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + + + +NT+IDG C  G + KA ++   M    I PD  TYN+L++G   +   ++   
Sbjct: 429 RSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLN 488

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM D+ ++P+ VT+N+I+D L + G+   A ++L  M+      +  TY+ ++ G C
Sbjct: 489 LFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLC 548

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                + A  +F  + +M  K +  + N +IN     +  EEA  L+  +   G+ P   
Sbjct: 549 RNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNAS 608

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           TY  +   L +   VE A  +F  M++   A  +   N  I  L + G IV+A
Sbjct: 609 TYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKA 661


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/357 (34%), Positives = 199/357 (55%), Gaps = 10/357 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC--------H- 63
           KPN V  N +I+  C+ G +  A ++  ++      P+ +T N+LI GLC        H 
Sbjct: 94  KPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHC 153

Query: 64  -ANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
                 +A  LF +M+ + + P V TF +++D  CK G++ EA  +L +M+ + ++P   
Sbjct: 154 IVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVV 213

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TY++LMDG+ L  ++N+A+ +F +M  +G   D  SY+ILING+CK K ++EA+ L +EM
Sbjct: 214 TYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEM 273

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
             K I P VVTY++L  GL +  ++ +ALKL +EM       +  TY++ +D LCKN  +
Sbjct: 274 HHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQV 333

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
             A+ L   +     + ++  Y  LI GLC+SG+LE A ++F  L  +    +V TY +M
Sbjct: 334 DNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVM 393

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           I G C+ G  D+A  L   ME+N   PN   +  +I    + ++     +LL +M E
Sbjct: 394 IQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIE 450



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 190/370 (51%), Gaps = 10/370 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  + +N I+  L K         L  +M+   I P++V  N LI+  C       A  +
Sbjct: 60  PPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSV 119

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGK----------MDEASRLLDLMVQRDVRPNAFT 123
             +++  G +P+ +T N ++  LC NGK          + +A  L + M+  ++ P+ +T
Sbjct: 120 LTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYT 179

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           ++ L+DGFC  G++  A+ +   M   G K   V+YN L++GY   K+V +A S++  M 
Sbjct: 180 FTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMA 239

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
             G+ P + +Y+ L  G  +I  ++ A++L +EM    +  +  TY++ IDGLCK+G I 
Sbjct: 240 QLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKIS 299

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
            A++L   +       +I  Y+ ++D LCK+ +++ A+ L   +  + +  ++ TY I+I
Sbjct: 300 YALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILI 359

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            GLC  G+++ A  +F D+       NV  +  +I GF       + + LL KM++   +
Sbjct: 360 KGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCI 419

Query: 364 PDASIVSMVV 373
           P+A    +++
Sbjct: 420 PNAKTYEIII 429



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 173/352 (49%), Gaps = 45/352 (12%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           VD A +LF ++  +N  P  + +N ++  L  +  ++    L  +M  +G++P++V  N+
Sbjct: 43  VDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 102

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL----------TGKINRAE 141
           +++  C+ G +  A  +L  +++   +PN  T +TL+ G CL           GK+  A 
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
           +LF  M       D  ++ IL++G+CK   V+EA ++   M+ +GIKP VVTY       
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTY------- 215

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
                                       N+ +DG      + +A  +F T+  L    DI
Sbjct: 216 ----------------------------NSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDI 247

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
           Q+Y+ LI+G CK   ++ A+EL + +  + ++ +VVTY+ +I GLC  G++  A  L  +
Sbjct: 248 QSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDE 307

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           M +    PN++ + +++    + ++    I LL +MK + + P+    ++++
Sbjct: 308 MHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILI 359



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 131/238 (55%), Gaps = 2/238 (0%)

Query: 3   NGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC 62
           N   ++GV   P+  +Y+ +I+G CK   +D+A  L  +M  + I P+VVTY+SLI GLC
Sbjct: 236 NTMAQLGV--SPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLC 293

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
            +   + A +L  EM D+G  P++VT++ I+D LCKN ++D A  LL  M  + ++PN +
Sbjct: 294 KSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMY 353

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TY+ L+ G C +GK+  A ++F  +   G   +  +Y ++I G+C     +EAL+L  +M
Sbjct: 354 TYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKM 413

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
              G  P   TY  + L LF+  + E A KL  EM   +     +  N  I  +   G
Sbjct: 414 EDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVTG 471



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 146/288 (50%), Gaps = 10/288 (3%)

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           N  +D+A  L + ++Q++  P    ++ ++     +   +    L   ME  G K + V+
Sbjct: 40  NNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVN 99

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF---EIH-------QVE 208
            NILIN +C+   +  A S+  +++  G KP  +T NTL  GL    +IH       +++
Sbjct: 100 CNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLK 159

Query: 209 HALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLI 268
            A+ LF +M  +++  D  T+   +DG CK G + EA  +   + I   +  +  YN L+
Sbjct: 160 DAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLM 219

Query: 269 DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVA 328
           DG     ++  A  +F ++ +  +  D+ +Y+I+I+G C    MD+A +L  +M    + 
Sbjct: 220 DGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQII 279

Query: 329 PNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           PNV+ + +LI G  +  K S  ++L+ +M ++   P+    S ++D L
Sbjct: 280 PNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDAL 327


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/357 (33%), Positives = 197/357 (55%), Gaps = 1/357 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +TYN +I+GLC+ G +++   +  +M  +   PD VTYN+L++G C   ++++A  
Sbjct: 270 EPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALV 329

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+  G+ P VVT+  +++ +CK G ++ A    D M  R +RPN  TY++L++GF 
Sbjct: 330 LHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFS 389

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A  ++  M   G     V+YN L+NG+C +  +EEA+ L R M  KG+ P VV
Sbjct: 390 QKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVV 449

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y+T+  G     +++ A ++  EM    V+ D  TY++ I GLC+   + EA +LF+ +
Sbjct: 450 SYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEM 509

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D   Y  LI+G CK G L  AL L   + ++  + D VTYN++I+GL    + 
Sbjct: 510 LNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQART 569

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            +A  L L +  +   PN I + TLI     I   S V+ L+     K +M +A  V
Sbjct: 570 REAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKS-VVALIKGFCMKGLMNEADQV 625



 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 126/381 (33%), Positives = 198/381 (51%), Gaps = 22/381 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+++G CK G   +A  L  +M    + PDVVTY SLI+ +C A + N A   
Sbjct: 306 PDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEF 365

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M  +G++P+ VT+  +++   + G MDEA R+ D M++    P   TY+ L++G C+
Sbjct: 366 FDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCV 425

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G++  A  L   ME  G   D VSY+ +I G+C+ +E++ A  +  EMV KG+ P  +T
Sbjct: 426 SGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAIT 485

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           Y++L  GL E  ++  A  LF+EM    +  D  TY + I+G CK G + EA+ L   + 
Sbjct: 486 YSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMI 545

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH------ 304
             G L    D   YN LI+GL K  R   A  L   L     + + +TY+ +I       
Sbjct: 546 KKGFLP---DTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIE 602

Query: 305 ---------GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
                    G C  G M++A  +F  M +    PN  ++  +IHG  R     K  +L  
Sbjct: 603 FKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYK 662

Query: 356 KMKEKKVMPDA-SIVSMVVDL 375
           +M +   +P   +I+++V  L
Sbjct: 663 EMVDFGFIPHTVTIIALVKAL 683



 Score =  200 bits (509), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 200/362 (55%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  +YN +I G C  G ++     F +M+     P+VVTYN++I   C     +EA +L 
Sbjct: 202 NVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLL 261

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M  +G++P+++T+N++++ LC+ G+++E S +L  M ++   P+  TY+TL++G+C  
Sbjct: 262 RSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKV 321

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G  ++A  L   M   G   D V+Y  LIN  CK   +  A+  + +M  +G++P  VTY
Sbjct: 322 GNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTY 381

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            +L  G  +   ++ A ++++EM R        TYN  ++G C +G + EA+ L R +  
Sbjct: 382 TSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEG 441

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D+ +Y+ +I G C+   L+ A ++   +  + +  D +TY+ +I GLC   ++++
Sbjct: 442 KGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNE 501

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A DLF +M   ++ P+   + +LI+G+ +    ++ + L  +M +K  +PD    +++++
Sbjct: 502 ACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLIN 561

Query: 375 LL 376
            L
Sbjct: 562 GL 563



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 189/367 (51%), Gaps = 1/367 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN-E 69
           +C  ++  ++ ++       F++KA  +    K     P V++YN+++  +         
Sbjct: 127 MCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIF 186

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A++++ EM+  GV  +V ++N+++   C  G ++   R  + M +    PN  TY+T++ 
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIG 246

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            +C   +I+ A +L  SM   G + + ++YN++ING C+   +EE   +  EM  KG  P
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAP 306

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             VTYNTL  G  ++     AL L  EM R+ +  D  TY + I+ +CK G +  A+E F
Sbjct: 307 DGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFF 366

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             + +     +   Y  LI+G  + G ++ A  ++  + R      +VTYN +++G C  
Sbjct: 367 DQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVS 426

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G+M++A  L   ME   ++P+V+ + T+I GF R  +  +  ++  +M EK V PDA   
Sbjct: 427 GRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITY 486

Query: 370 SMVVDLL 376
           S ++  L
Sbjct: 487 SSLIQGL 493



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 175/323 (54%), Gaps = 16/323 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY ++I+G  ++GF+D+A  ++ +M      P +VTYN+L++G C +    EA  
Sbjct: 375 RPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIG 434

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M  +G+ P VV+++ I+   C+  ++D A ++   MV++ V P+A TYS+L+ G C
Sbjct: 435 LLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLC 494

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++N A +LF  M +     D+ +Y  LINGYCK  ++ EAL+L+ EM+ KG  P  V
Sbjct: 495 EQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTV 554

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID---------------GLC 237
           TYN L  GL +  +   A +L  ++  D+   +  TY+T I+               G C
Sbjct: 555 TYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFC 614

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
             G + EA ++F ++     + +   YN +I G C+ G +  A +L++ +     +   V
Sbjct: 615 MKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTV 674

Query: 298 TYNIMIHGLCNDGQMDKAHDLFL 320
           T   ++  L ++G MD+  +L +
Sbjct: 675 TIIALVKALYSEG-MDEQLNLVI 696


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 115/324 (35%), Positives = 183/324 (56%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N ++YN++I+GLC +G + +   L  +M+G+ + PD VTYN+L++G C   + ++   L 
Sbjct: 276 NLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLL 335

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ +G+ P+VVT+  +++ +CK G +  A  + D M  R +RPN  TY+TL+DGFC  
Sbjct: 336 SEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQK 395

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +N A ++   M   G     V+YN L++GYC    V+EA+ + R MV +G+ P VV+Y
Sbjct: 396 GLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSY 455

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           +T+  G     ++  A ++ EEM    V  DT TY++ I GLC    +VEA +LFR +  
Sbjct: 456 STVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMR 515

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D   Y  LI+  C  G L  AL L   + +R  + D VTY+++I+GL    +   
Sbjct: 516 RGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKV 575

Query: 315 AHDLFLDMEENAVAPNVIIFVTLI 338
           A  L L +      P+ + + TLI
Sbjct: 576 AKRLLLKLFYEESVPDDVTYNTLI 599



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 189/357 (52%), Gaps = 5/357 (1%)

Query: 14  PNTVTYNTIIDGLCKEGF-----VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           P  ++YN ++D L +         D A+ +F  M    ++P+V TYN +I G+    D  
Sbjct: 165 PTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLE 224

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +      +M  +G+ P+VVT+N ++D  CK  K+ EA  LL  M    V  N  +Y++++
Sbjct: 225 KGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVI 284

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +G C  G+++   EL   M   G   D+V+YN L+NG+CK   + + L L  EMV KG+ 
Sbjct: 285 NGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLS 344

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTY TL   + +   +  A+++F++M+   +  +  TY T IDG C+ G + EA ++
Sbjct: 345 PNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKV 404

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              + +      +  YN L+ G C  GR++ A+ + R +  R L  DVV+Y+ +I G C 
Sbjct: 405 LSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCR 464

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + ++ KA  +  +M E  V P+ + + +LI G     K  +  +L  +M  + + PD
Sbjct: 465 ERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPD 521



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 190/363 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN II G+  +G ++K      +M+ E I+P+VVTYN+LI   C      EA  L
Sbjct: 205 PNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMAL 264

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   GV  +++++N +++ LC  G+M E   L++ M  + + P+  TY+TL++GFC 
Sbjct: 265 LRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCK 324

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +++   L   M   G   + V+Y  LIN  CK   +  A+ ++ +M  +G++P   T
Sbjct: 325 EGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERT 384

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G  +   +  A K+  EM     +    TYN  + G C  G + EAV + R + 
Sbjct: 385 YTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMV 444

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+ +Y+ +I G C+   L  A ++   +  + ++ D VTY+ +I GLC   ++ 
Sbjct: 445 ERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLV 504

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A DLF +M    + P+ + + +LI+ +    + SK + L  +M ++  +PD    S+++
Sbjct: 505 EAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLI 564

Query: 374 DLL 376
           + L
Sbjct: 565 NGL 567



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 187/367 (50%), Gaps = 5/367 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN-----DWNE 69
           ++  ++ ++  L + GFV KA  L          P V++YN+++  L   +     D+++
Sbjct: 131 SSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDD 190

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+R+F +M+  GV P+V T+NVI+  +   G +++    +  M +  + PN  TY+TL+D
Sbjct: 191 AERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLID 250

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             C   K+  A  L  +M   G   + +SYN +ING C    + E   L  EM  KG+ P
Sbjct: 251 ASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVP 310

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             VTYNTL  G  +   +   L L  EM    ++ +  TY T I+ +CK G +  AVE+F
Sbjct: 311 DEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIF 370

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             + +     + + Y  LIDG C+ G +  A ++   +        VVTYN ++HG C  
Sbjct: 371 DQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFL 430

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++ +A  +   M E  + P+V+ + T+I GF R  +  K  ++  +M EK V+PD    
Sbjct: 431 GRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTY 490

Query: 370 SMVVDLL 376
           S ++  L
Sbjct: 491 SSLIQGL 497



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 196/383 (51%), Gaps = 15/383 (3%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G    PN VTY T+I+ +CK G + +A  +F QM+   + P+  TY +LI G C     
Sbjct: 339 VGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLM 398

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           NEA ++  EM+  G  PSVVT+N ++   C  G++ EA  +L  MV+R + P+  +YST+
Sbjct: 399 NEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTV 458

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + GFC   ++ +A ++   M   G   D V+Y+ LI G C  +++ EA  L+REM+ +G+
Sbjct: 459 IAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGL 518

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P  VTY +L        ++  AL+L +EM +     D  TY+  I+GL K      A  
Sbjct: 519 PPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKR 578

Query: 248 LFRTLGILKCELDIQAYNCLID---------------GLCKSGRLEIALELFRSLPRRVL 292
           L   L   +   D   YN LI+               G C  G +  A  +F+++ +R  
Sbjct: 579 LLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNH 638

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
             +   YN+MIHG    G + KA++L++++E ++ A + +  + L+    R     ++  
Sbjct: 639 KPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSR 698

Query: 353 LLHKMKEKKVMPDASIVSMVVDL 375
           LL  +     + DA +  ++V++
Sbjct: 699 LLQNILRSCRLNDAKVAKVLVEV 721


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 202/363 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TY  +I   C+ G +D A   F  M  + + P+   Y  LI G C   D  +A+ L
Sbjct: 419 PDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEEL 478

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            +E+ ++G+ P +++F  +++ LCK G++ EA R+ D++++   + +   +++L+DG+CL
Sbjct: 479 VYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCL 538

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A  +  +M S+G + D V+Y  L+NG CKN  +++ L L+RE++ KG+KPT  T
Sbjct: 539 IGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFT 598

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  +  GLF   +   A ++F+EM    +A    TY+  + GLC+N    EA+ +F+ L 
Sbjct: 599 YGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLC 658

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  + DI   N +I  + K+ R E A  LF S+P   LV  V TY IM+  L  +G ++
Sbjct: 659 AMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVE 718

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  +F  M ++ ++P       ++   +   +  K    + ++  K ++ +AS  SM++
Sbjct: 719 EAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLL 778

Query: 374 DLL 376
            L 
Sbjct: 779 SLF 781



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 202/431 (46%), Gaps = 70/431 (16%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTYN++I  LCK   VDKA+ +  QM G  + PD VTYN+LIHG      W +A R+
Sbjct: 244 PNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRM 303

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA---------------------------- 105
           F EM  +GV P+ VT +  +  LCK+G+++EA                            
Sbjct: 304 FKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYAT 363

Query: 106 -------SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
                  S L +LMV+  + PN   ++ L++G+   G +  A  +F  M+  G   D ++
Sbjct: 364 AGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLT 423

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG-------------LFEIH 205
           Y  +I+ +C+   +++A+  +  M+ KG++P    Y  L  G             ++EI 
Sbjct: 424 YLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIR 483

Query: 206 ----------------------QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
                                 +V  A ++F+ + R    AD + + + IDG C  G + 
Sbjct: 484 NKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMS 543

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           EA  +   +  +  E DI  Y  L++G CK+GR++  L LFR L  + +     TY I++
Sbjct: 544 EAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIIL 603

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            GL + G+   A ++F +M E+ +A  +  +  L+ G  R N   + I +  K+    V 
Sbjct: 604 DGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVK 663

Query: 364 PDASIVSMVVD 374
            D  I+++++ 
Sbjct: 664 FDIVILNIMIS 674



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/354 (32%), Positives = 183/354 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N V Y+T++ GL KEG V +A  LF +M  + + P+VVTYNS+IH LC A   ++A+
Sbjct: 207 CPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQ 266

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  +M+  GVQP  VT+N ++      G+  +A R+   M  R V PN  T ST +   
Sbjct: 267 GILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFL 326

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+I  A E F SM + G K + +SY+ L++GY     + +  +L+  MV  GI P  
Sbjct: 327 CKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQ 386

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             +N L  G  +   V  A+ +FE+MQ+  +  D  TY   I   C+ G + +A++ F  
Sbjct: 387 HVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNH 446

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     E +   Y CLI G C  G L  A EL   +  + L   ++++  +I+ LC +G+
Sbjct: 447 MIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGR 506

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + +A  +F  +       +V IF +LI G+  I K S+   +   M    + PD
Sbjct: 507 VFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPD 560



 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 201/377 (53%), Gaps = 5/377 (1%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M+ G G    V  P   TY+ +ID  C+   +D A A F  +  + +  DV+  +SL+ G
Sbjct: 90  MSTGTGP--RVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRG 147

Query: 61  LCHANDWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD--V 117
           LC A   +EA  + F  M + G  P  ++++ ++  +C +G+   A  +L + V++    
Sbjct: 148 LCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGC 207

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
             N   YST++ G    GK+  A +LF  M   G   + V+YN +I+  CK + V++A  
Sbjct: 208 PCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQG 267

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           + R+MV  G++P  VTYNTL  G   + Q + A+++F+EM    V  +T T +TF+  LC
Sbjct: 268 ILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLC 327

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           K+G I EA E F ++     +L+I +Y+ L+ G   +G L     LF  + R  +V +  
Sbjct: 328 KHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQH 387

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            +NI+++G    G + +A  +F DM++  + P+V+ ++ +IH F R+      ++  + M
Sbjct: 388 VFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHM 447

Query: 358 KEKKVMPDASIVSMVVD 374
            +K V P+ ++   ++ 
Sbjct: 448 IDKGVEPNFAVYQCLIQ 464



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 119/223 (53%), Gaps = 5/223 (2%)

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK-LFEE 216
           +Y+ILI+  C+ + ++ A + +  ++ +G+K  V+  ++L  GL +  + + A+  LF  
Sbjct: 105 TYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHR 164

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK---CELDIQAYNCLIDGLCK 273
           M       D  +Y+T +  +C +G    A+++ R + + +   C  ++  Y+ ++ GL K
Sbjct: 165 MPELGCVPDAISYSTVLKSVCDDGRSQWALDILR-MAVKQGGGCPCNVVVYSTVVHGLFK 223

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
            G++  A +LF  + ++ +  +VVTYN +IH LC    +DKA  +   M  N V P+ + 
Sbjct: 224 EGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVT 283

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + TLIHG+  + +  + + +  +M  + V+P+    S  V  L
Sbjct: 284 YNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFL 326



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 113/253 (44%), Gaps = 42/253 (16%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V  +P+ VTY T+++G CK G +D    LF ++  + + P   TY  ++ GL HA   
Sbjct: 553 VSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRT 612

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             AK +F EM++ G+  ++ T+++++  LC+N   +EA                      
Sbjct: 613 AAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAI--------------------- 651

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
                          +F  + +M  K D V  NI+I+   K +  EEA  L+  +   G+
Sbjct: 652 --------------TVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGL 697

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            PTV TY  +   L +   VE A  +F  M +  ++  +   N  +  L + G IV+A  
Sbjct: 698 VPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKA-- 755

Query: 248 LFRTLGILKCELD 260
                GI  C +D
Sbjct: 756 -----GIYMCRVD 763



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 57/124 (45%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V  N +I  + K    ++A+ LF  +    + P V TY  ++  L       EA+ 
Sbjct: 663 KFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEG 722

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  M+  G+ P+    NVI+  L + G++ +A   +  +  + +   A T S L+  F 
Sbjct: 723 VFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFS 782

Query: 133 LTGK 136
             GK
Sbjct: 783 CKGK 786


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 200/364 (54%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVT+ T+I  LC+ G +D A   F  M    + P    Y  LI G C+  +  +AK L
Sbjct: 456 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKEL 515

Query: 74  FFEMMDQGVQPSVVT-FNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             EMM++ + P  V  F+ I++ LCK G++ E   ++D+MVQ   RPN  T+++LM+G+C
Sbjct: 516 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYC 575

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G +  A  L  +M S+G + +   Y  L++GYCKN  +++AL+++R+M+ KG+KPT V
Sbjct: 576 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 635

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ +  GLF+  +   A K+F EM          TY   + GLC+N    EA  L   L
Sbjct: 636 LYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 695

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  + DI  +N +I  + K GR + A ELF ++    LV ++ TY++MI  L  +   
Sbjct: 696 FAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESY 755

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A +LF+ +E++  A +  +   ++   +   + +K    L  + E  +  +AS +S++
Sbjct: 756 EEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLL 815

Query: 373 VDLL 376
             L 
Sbjct: 816 ASLF 819



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 197/400 (49%), Gaps = 40/400 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +Y ++I G  K+G VDKA  LFL+M  + + P ++  NS+I  LC   + ++A+ +
Sbjct: 209 PDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI 267

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+D G+ P + T+++I+D LCK+  MD+A R+L+ MV+   RPN+ TY++L+ G+ +
Sbjct: 268 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 327

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G  N +  +F  M S G      + N  I+   K+    EA  ++  MV KG KP +++
Sbjct: 328 SGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIIS 387

Query: 194 YNT---------------LFLGLFEI-----------------------HQVEHALKLFE 215
           Y+T               ++  +F +                         ++ A+ +FE
Sbjct: 388 YSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFE 447

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
           +MQ   +  DT T+ T I  LC+ G + +A+  F  +  +        Y CLI G C  G
Sbjct: 448 DMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHG 507

Query: 276 RLEIALELFRSLPRRVLVADVVTY-NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            L  A EL   +  + +    V Y + +I+ LC +G++ +  D+   M +    PNV+ F
Sbjct: 508 ELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTF 567

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +L+ G+  +    +   LL  M    + P+  I   +VD
Sbjct: 568 NSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 607



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 169/349 (48%), Gaps = 3/349 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTY-NSLIHGLCHAN 65
           +IGV   P+   Y  +I G C  G + KAK L  +M  ++I P  V Y +S+I+ LC   
Sbjct: 486 DIGV--PPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEG 543

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
              E K +   M+  G +P+VVTFN +M+  C  G M+EA  LLD M    + PN + Y 
Sbjct: 544 RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 603

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+DG+C  G+I+ A  +F  M   G K   V Y+I+++G  + +    A  ++ EM+  
Sbjct: 604 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 663

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G   ++ TY  +  GL   +  + A  L E++   +V  D  T+N  I  + K G   EA
Sbjct: 664 GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 723

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            ELF  +       +IQ Y+ +I  L K    E A  LF S+ +    +D    N ++  
Sbjct: 724 KELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRM 783

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           L N  ++ KA +    + EN +         L   F R  K  + I+LL
Sbjct: 784 LLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 832



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 171/352 (48%), Gaps = 4/352 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN++TYN++I G    G  +++  +F QM    + P V   NS IH L      NEAK 
Sbjct: 312 RPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKC 371

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCK---NGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           +F  M+ +G +P +++++     +C             + +LM+ + + PN   ++ L++
Sbjct: 372 IFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILIN 431

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            +   G +++A  +F  M++ G   D V++  +I+  C+   +++AL  +  MV  G+ P
Sbjct: 432 AYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPP 491

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY-NTFIDGLCKNGYIVEAVEL 248
           +   Y  L  G     ++  A +L  EM   D+      Y ++ I+ LCK G + E  ++
Sbjct: 492 SEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDI 551

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +       ++  +N L++G C  G +E A  L  ++    +  +   Y  ++ G C 
Sbjct: 552 MDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCK 611

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +G++D A  +F DM    V P  +++  ++HG  +  + +   ++ H+M E 
Sbjct: 612 NGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 663



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 149/311 (47%), Gaps = 9/311 (2%)

Query: 74  FFEMMDQGV-----QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            F+ MD+        P++ T+N+++D   +  + D    ++  +++  + P+ F+YS L+
Sbjct: 159 LFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LI 217

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            GF   G++++A  LF  M   G     +  N +I   CK KE+++A S+ ++MV  GI 
Sbjct: 218 YGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIA 277

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P + TY+ +  GL +   ++ A ++ E+M       ++ TYN+ I G   +G   E+V +
Sbjct: 278 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 337

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F+ +        +   N  I  L K GR   A  +F S+  +    D+++Y+     +C 
Sbjct: 338 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCY 397

Query: 309 ---DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
                     H++F  M    +APN  +F  LI+ + R     K + +   M+ K ++PD
Sbjct: 398 WYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPD 457

Query: 366 ASIVSMVVDLL 376
               + V+  L
Sbjct: 458 TVTFATVISSL 468



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 5/136 (3%)

Query: 245 AVELFRTLGILKCELD----IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
           A+ELF+ +    C       I  YN LID   +  R ++ L +   L +  L  D  +Y+
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 215

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +I+G   DG++DKAH LFL+M E  V P ++I  ++I    ++ +  K   ++ KM + 
Sbjct: 216 -LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274

Query: 361 KVMPDASIVSMVVDLL 376
            + PD    S+++D L
Sbjct: 275 GIAPDLFTYSLIIDGL 290


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 200/364 (54%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVT+ T+I  LC+ G +D A   F  M    + P    Y  LI G C+  +  +AK L
Sbjct: 293 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKEL 352

Query: 74  FFEMMDQGVQPSVVT-FNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             EMM++ + P  V  F+ I++ LCK G++ E   ++D+MVQ   RPN  T+++LM+G+C
Sbjct: 353 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYC 412

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G +  A  L  +M S+G + +   Y  L++GYCKN  +++AL+++R+M+ KG+KPT V
Sbjct: 413 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 472

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ +  GLF+  +   A K+F EM          TY   + GLC+N    EA  L   L
Sbjct: 473 LYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 532

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  + DI  +N +I  + K GR + A ELF ++    LV ++ TY++MI  L  +   
Sbjct: 533 FAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESY 592

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A +LF+ +E++  A +  +   ++   +   + +K    L  + E  +  +AS +S++
Sbjct: 593 EEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLL 652

Query: 373 VDLL 376
             L 
Sbjct: 653 ASLF 656



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 198/399 (49%), Gaps = 39/399 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +Y ++I G  K+G VDKA  LFL+M  + + P ++  NS+I  LC   + ++A+ +
Sbjct: 47  PDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI 105

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+D G+ P + T+++I+D LCK+  MD+A R+L+ MV+   RPN+ TY++L+ G+ +
Sbjct: 106 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 165

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G  N +  +F  M S G      + N  I+   K+    EA  ++  MV KG KP +++
Sbjct: 166 SGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIIS 225

Query: 194 YNTLFLG--------LFEIHQV-----------------------------EHALKLFEE 216
           Y+T+  G        L ++H +                             + A+ +FE+
Sbjct: 226 YSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 285

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           MQ   +  DT T+ T I  LC+ G + +A+  F  +  +        Y CLI G C  G 
Sbjct: 286 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE 345

Query: 277 LEIALELFRSLPRRVLVADVVTY-NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           L  A EL   +  + +    V Y + +I+ LC +G++ +  D+   M +    PNV+ F 
Sbjct: 346 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 405

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +L+ G+  +    +   LL  M    + P+  I   +VD
Sbjct: 406 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 444



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 174/351 (49%), Gaps = 3/351 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN++TYN++I G    G  +++  +F QM    + P V   NS IH L      NEAK 
Sbjct: 150 RPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKC 209

Query: 73  LFFEMMDQGVQPSVVTFNVIMD--ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           +F  M+ +G +P +++++ ++       +  + +   + +LM+ + + PN   ++ L++ 
Sbjct: 210 IFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINA 269

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G +++A  +F  M++ G   D V++  +I+  C+   +++AL  +  MV  G+ P+
Sbjct: 270 YARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPS 329

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY-NTFIDGLCKNGYIVEAVELF 249
              Y  L  G     ++  A +L  EM   D+      Y ++ I+ LCK G + E  ++ 
Sbjct: 330 EAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIM 389

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +       ++  +N L++G C  G +E A  L  ++    +  +   Y  ++ G C +
Sbjct: 390 DMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 449

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           G++D A  +F DM    V P  +++  ++HG  +  + +   ++ H+M E 
Sbjct: 450 GRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 500



 Score =  157 bits (397), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 169/349 (48%), Gaps = 3/349 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTY-NSLIHGLCHAN 65
           +IGV   P+   Y  +I G C  G + KAK L  +M  ++I P  V Y +S+I+ LC   
Sbjct: 323 DIGV--PPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEG 380

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
              E K +   M+  G +P+VVTFN +M+  C  G M+EA  LLD M    + PN + Y 
Sbjct: 381 RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 440

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+DG+C  G+I+ A  +F  M   G K   V Y+I+++G  + +    A  ++ EM+  
Sbjct: 441 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 500

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G   ++ TY  +  GL   +  + A  L E++   +V  D  T+N  I  + K G   EA
Sbjct: 501 GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 560

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            ELF  +       +IQ Y+ +I  L K    E A  LF S+ +    +D    N ++  
Sbjct: 561 KELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRM 620

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           L N  ++ KA +    + EN +         L   F R  K  + I+LL
Sbjct: 621 LLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 669



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 148/295 (50%), Gaps = 3/295 (1%)

Query: 84  PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEEL 143
           P++ T+N+++D   +  + D    ++  +++  + P+ F+YS L+ GF   G++++A  L
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 70

Query: 144 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 203
           F  M   G     +  N +I   CK KE+++A S+ ++MV  GI P + TY+ +  GL +
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130

Query: 204 IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQA 263
              ++ A ++ E+M       ++ TYN+ I G   +G   E+V +F+ +        +  
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN--DGQMDKAHDLFLD 321
            N  I  L K GR   A  +F S+  +    D+++Y+ M+HG     D  +   H++F  
Sbjct: 191 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 250

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           M    +APN  +F  LI+ + R     K + +   M+ K ++PD    + V+  L
Sbjct: 251 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 305



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 157/322 (48%), Gaps = 3/322 (0%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P + TYN LI      +  +    +   ++  G+ P   ++++I     K+G++D+A  L
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG-FVKDGEVDKAHCL 70

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
              M+++ V P     ++++   C   ++++AE +   M   G   D  +Y+++I+G CK
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
           +K +++A  +  +MV  G +P  +TYN+L  G         ++++F++M    V      
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA--LELFRS 286
            N+FI  L K+G   EA  +F ++ +   + DI +Y+ ++ G   +    +A    +F  
Sbjct: 191 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 250

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +  + +  +   +NI+I+     G MDKA  +F DM+   + P+ + F T+I    RI +
Sbjct: 251 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 310

Query: 347 PSKVIELLHKMKEKKVMPDASI 368
               +   + M +  V P  ++
Sbjct: 311 LDDALHKFNHMVDIGVPPSEAV 332


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 200/364 (54%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVT+ T+I  LC+ G +D A   F  M    + P    Y  LI G C+  +  +AK L
Sbjct: 455 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKEL 514

Query: 74  FFEMMDQGVQPSVVT-FNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             EMM++ + P  V  F+ I++ LCK G++ E   ++D+MVQ   RPN  T+++LM+G+C
Sbjct: 515 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYC 574

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G +  A  L  +M S+G + +   Y  L++GYCKN  +++AL+++R+M+ KG+KPT V
Sbjct: 575 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 634

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ +  GLF+  +   A K+F EM          TY   + GLC+N    EA  L   L
Sbjct: 635 LYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 694

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  + DI  +N +I  + K GR + A ELF ++    LV ++ TY++MI  L  +   
Sbjct: 695 FAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESY 754

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A +LF+ +E++  A +  +   ++   +   + +K    L  + E  +  +AS +S++
Sbjct: 755 EEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLL 814

Query: 373 VDLL 376
             L 
Sbjct: 815 ASLF 818



 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 198/399 (49%), Gaps = 39/399 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +Y ++I G  K+G VDKA  LFL+M  + + P ++  NS+I  LC   + ++A+ +
Sbjct: 209 PDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI 267

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+D G+ P + T+++I+D LCK+  MD+A R+L+ MV+   RPN+ TY++L+ G+ +
Sbjct: 268 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 327

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G  N +  +F  M S G      + N  I+   K+    EA  ++  MV KG KP +++
Sbjct: 328 SGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIIS 387

Query: 194 YNTLFLG--------LFEIHQV-----------------------------EHALKLFEE 216
           Y+T+  G        L ++H +                             + A+ +FE+
Sbjct: 388 YSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 447

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           MQ   +  DT T+ T I  LC+ G + +A+  F  +  +        Y CLI G C  G 
Sbjct: 448 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE 507

Query: 277 LEIALELFRSLPRRVLVADVVTY-NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           L  A EL   +  + +    V Y + +I+ LC +G++ +  D+   M +    PNV+ F 
Sbjct: 508 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 567

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +L+ G+  +    +   LL  M    + P+  I   +VD
Sbjct: 568 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 606



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 174/351 (49%), Gaps = 3/351 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN++TYN++I G    G  +++  +F QM    + P V   NS IH L      NEAK 
Sbjct: 312 RPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKC 371

Query: 73  LFFEMMDQGVQPSVVTFNVIMD--ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           +F  M+ +G +P +++++ ++       +  + +   + +LM+ + + PN   ++ L++ 
Sbjct: 372 IFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINA 431

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G +++A  +F  M++ G   D V++  +I+  C+   +++AL  +  MV  G+ P+
Sbjct: 432 YARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPS 491

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY-NTFIDGLCKNGYIVEAVELF 249
              Y  L  G     ++  A +L  EM   D+      Y ++ I+ LCK G + E  ++ 
Sbjct: 492 EAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIM 551

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +       ++  +N L++G C  G +E A  L  ++    +  +   Y  ++ G C +
Sbjct: 552 DMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 611

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           G++D A  +F DM    V P  +++  ++HG  +  + +   ++ H+M E 
Sbjct: 612 GRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 662



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 169/349 (48%), Gaps = 3/349 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTY-NSLIHGLCHAN 65
           +IGV   P+   Y  +I G C  G + KAK L  +M  ++I P  V Y +S+I+ LC   
Sbjct: 485 DIGV--PPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEG 542

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
              E K +   M+  G +P+VVTFN +M+  C  G M+EA  LLD M    + PN + Y 
Sbjct: 543 RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 602

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+DG+C  G+I+ A  +F  M   G K   V Y+I+++G  + +    A  ++ EM+  
Sbjct: 603 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 662

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G   ++ TY  +  GL   +  + A  L E++   +V  D  T+N  I  + K G   EA
Sbjct: 663 GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 722

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            ELF  +       +IQ Y+ +I  L K    E A  LF S+ +    +D    N ++  
Sbjct: 723 KELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRM 782

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           L N  ++ KA +    + EN +         L   F R  K  + I+LL
Sbjct: 783 LLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 831



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 153/310 (49%), Gaps = 8/310 (2%)

Query: 74  FFEMMDQGV-----QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            F+ MD+        P++ T+N+++D   +  + D    ++  +++  + P+ F+YS L+
Sbjct: 159 LFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LI 217

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            GF   G++++A  LF  M   G     +  N +I   CK KE+++A S+ ++MV  GI 
Sbjct: 218 YGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIA 277

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P + TY+ +  GL +   ++ A ++ E+M       ++ TYN+ I G   +G   E+V +
Sbjct: 278 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 337

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F+ +        +   N  I  L K GR   A  +F S+  +    D+++Y+ M+HG   
Sbjct: 338 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT 397

Query: 309 --DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             D  +   H++F  M    +APN  +F  LI+ + R     K + +   M+ K ++PD 
Sbjct: 398 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 457

Query: 367 SIVSMVVDLL 376
              + V+  L
Sbjct: 458 VTFATVISSL 467



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 5/136 (3%)

Query: 245 AVELFRTLGILKCELD----IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
           A+ELF+ +    C       I  YN LID   +  R ++ L +   L +  L  D  +Y+
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 215

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +I+G   DG++DKAH LFL+M E  V P ++I  ++I    ++ +  K   ++ KM + 
Sbjct: 216 -LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274

Query: 361 KVMPDASIVSMVVDLL 376
            + PD    S+++D L
Sbjct: 275 GIAPDLFTYSLIIDGL 290


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 200/364 (54%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVT+ T+I  LC+ G +D A   F  M    + P    Y  LI G C+  +  +AK L
Sbjct: 435 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKEL 494

Query: 74  FFEMMDQGVQPSVVT-FNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             EMM++ + P  V  F+ I++ LCK G++ E   ++D+MVQ   RPN  T+++LM+G+C
Sbjct: 495 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYC 554

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G +  A  L  +M S+G + +   Y  L++GYCKN  +++AL+++R+M+ KG+KPT V
Sbjct: 555 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 614

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ +  GLF+  +   A K+F EM          TY   + GLC+N    EA  L   L
Sbjct: 615 LYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 674

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  + DI  +N +I  + K GR + A ELF ++    LV ++ TY++MI  L  +   
Sbjct: 675 FAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESY 734

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A +LF+ +E++  A +  +   ++   +   + +K    L  + E  +  +AS +S++
Sbjct: 735 EEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLL 794

Query: 373 VDLL 376
             L 
Sbjct: 795 ASLF 798



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 198/399 (49%), Gaps = 39/399 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +Y ++I G  K+G VDKA  LFL+M  + + P ++  NS+I  LC   + ++A+ +
Sbjct: 189 PDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI 247

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+D G+ P + T+++I+D LCK+  MD+A R+L+ MV+   RPN+ TY++L+ G+ +
Sbjct: 248 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 307

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G  N +  +F  M S G      + N  I+   K+    EA  ++  MV KG KP +++
Sbjct: 308 SGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIIS 367

Query: 194 YNTLFLG--------LFEIHQV-----------------------------EHALKLFEE 216
           Y+T+  G        L ++H +                             + A+ +FE+
Sbjct: 368 YSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 427

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           MQ   +  DT T+ T I  LC+ G + +A+  F  +  +        Y CLI G C  G 
Sbjct: 428 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE 487

Query: 277 LEIALELFRSLPRRVLVADVVTY-NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           L  A EL   +  + +    V Y + +I+ LC +G++ +  D+   M +    PNV+ F 
Sbjct: 488 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 547

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +L+ G+  +    +   LL  M    + P+  I   +VD
Sbjct: 548 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 586



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 174/351 (49%), Gaps = 3/351 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN++TYN++I G    G  +++  +F QM    + P V   NS IH L      NEAK 
Sbjct: 292 RPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKC 351

Query: 73  LFFEMMDQGVQPSVVTFNVIMD--ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           +F  M+ +G +P +++++ ++       +  + +   + +LM+ + + PN   ++ L++ 
Sbjct: 352 IFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINA 411

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G +++A  +F  M++ G   D V++  +I+  C+   +++AL  +  MV  G+ P+
Sbjct: 412 YARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPS 471

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY-NTFIDGLCKNGYIVEAVELF 249
              Y  L  G     ++  A +L  EM   D+      Y ++ I+ LCK G + E  ++ 
Sbjct: 472 EAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIM 531

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +       ++  +N L++G C  G +E A  L  ++    +  +   Y  ++ G C +
Sbjct: 532 DMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 591

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           G++D A  +F DM    V P  +++  ++HG  +  + +   ++ H+M E 
Sbjct: 592 GRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 642



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 159/320 (49%), Gaps = 3/320 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTY-NSLIHGLCHAN 65
           +IGV   P+   Y  +I G C  G + KAK L  +M  ++I P  V Y +S+I+ LC   
Sbjct: 465 DIGV--PPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEG 522

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
              E K +   M+  G +P+VVTFN +M+  C  G M+EA  LLD M    + PN + Y 
Sbjct: 523 RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 582

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+DG+C  G+I+ A  +F  M   G K   V Y+I+++G  + +    A  ++ EM+  
Sbjct: 583 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 642

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G   ++ TY  +  GL   +  + A  L E++   +V  D  T+N  I  + K G   EA
Sbjct: 643 GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 702

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            ELF  +       +IQ Y+ +I  L K    E A  LF S+ +    +D    N ++  
Sbjct: 703 KELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRM 762

Query: 306 LCNDGQMDKAHDLFLDMEEN 325
           L N  ++ KA +    + EN
Sbjct: 763 LLNKAEVAKASNYLSIIGEN 782



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 153/310 (49%), Gaps = 8/310 (2%)

Query: 74  FFEMMDQGV-----QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            F+ MD+        P++ T+N+++D   +  + D    ++  +++  + P+ F+YS L+
Sbjct: 139 LFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LI 197

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            GF   G++++A  LF  M   G     +  N +I   CK KE+++A S+ ++MV  GI 
Sbjct: 198 YGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIA 257

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P + TY+ +  GL +   ++ A ++ E+M       ++ TYN+ I G   +G   E+V +
Sbjct: 258 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 317

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F+ +        +   N  I  L K GR   A  +F S+  +    D+++Y+ M+HG   
Sbjct: 318 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT 377

Query: 309 --DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             D  +   H++F  M    +APN  +F  LI+ + R     K + +   M+ K ++PD 
Sbjct: 378 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 437

Query: 367 SIVSMVVDLL 376
              + V+  L
Sbjct: 438 VTFATVISSL 447



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 131/276 (47%), Gaps = 3/276 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VT+N++++G C  G +++A AL   M    I P+   Y +L+ G C     ++A  
Sbjct: 540 RPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALT 599

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +M+ +GV+P+ V +++I+  L +  +   A ++   M++     +  TY  ++ G C
Sbjct: 600 VFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLC 659

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                + A  L   + +M  K D +++NI+I+   K    +EA  L+  + + G+ P + 
Sbjct: 660 RNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQ 719

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ +   L +    E A  LF  +++   A+D+   N  +  L     + +A      +
Sbjct: 720 TYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSII 779

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           G     L+    + L     + G ++    LF + P
Sbjct: 780 GENNLTLEASTISLLASLFSREGMIK---GLFGTAP 812



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 5/136 (3%)

Query: 245 AVELFRTLGILKCELD----IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
           A+ELF+ +    C       I  YN LID   +  R ++ L +   L +  L  D  +Y+
Sbjct: 136 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 195

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +I+G   DG++DKAH LFL+M E  V P ++I  ++I    ++ +  K   ++ KM + 
Sbjct: 196 -LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 254

Query: 361 KVMPDASIVSMVVDLL 376
            + PD    S+++D L
Sbjct: 255 GIAPDLFTYSLIIDGL 270


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/352 (34%), Positives = 197/352 (55%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           NT +YN II  LC+ G V +A  L +QM   +  PDVV+Y+++I G CH  +  +A +L 
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLM 316

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M  +G++P+  T+N I+  LCK GK  EA ++L  M+ + + P+   Y+TL+ GF   
Sbjct: 317 DDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKL 376

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +  A + F  M S     D ++Y  LI G+ +  +V E  +L+ EM+S+G+KP  VTY
Sbjct: 377 GHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTY 436

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            TL     +  ++ +A  L  EM +  +  +  TY   IDGLCK+G +  A EL   +  
Sbjct: 437 TTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRK 496

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              +L++  YN +++G+CK+G +E A++L + +    +  D +TY  +I   C  G +DK
Sbjct: 497 KGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDK 556

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           AH L  +M +  + P V+ F  L++GF  +        LL  M EK ++PDA
Sbjct: 557 AHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDA 608



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 200/360 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+Y+T+IDG C  G + KA  L   M+ + + P+  TYNS+I  LC      EA+++
Sbjct: 291 PDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKV 350

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EMM Q + P  V +  ++    K G +  A++  D M+ + + P+  TY+TL+ GF  
Sbjct: 351 LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQ 410

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+   + LF  M S G K D+V+Y  LI+ YCK  E+  A SL+ EMV  G+ P +VT
Sbjct: 411 GGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVT 470

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +  +++ A +L +EM++  +  +   YN+ ++G+CK G I +A++L + + 
Sbjct: 471 YGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEME 530

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   + D   Y  +ID  C+ G ++ A +L + +  R L   VVT+N++++G C  G ++
Sbjct: 531 VAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLE 590

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
               L   M E  + P+ I + TL+      N  +   ++  +M+ + V PD++  ++++
Sbjct: 591 DGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 180/365 (49%), Gaps = 6/365 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V Y T+I G  K G V  A   F +M  + I+PD +TY +LI G        E + L
Sbjct: 361 PDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNL 420

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+ +G++P  VT+  ++D  CK G+M  A  L + MVQ  + PN  TY  L+DG C 
Sbjct: 421 FHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCK 480

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A EL   M   G + +   YN ++NG CK   +E+A+ L +EM   GI P  +T
Sbjct: 481 HGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAIT 540

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           Y T+      +  ++ A KL +EM    +     T+N  ++G C  G + +   L   + 
Sbjct: 541 YTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWML 600

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             GI+    D   YN L+   C    +    ++++ +  + +  D  TYNI+I G C   
Sbjct: 601 EKGIVP---DAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKAR 657

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            + +A  L+ +M E    P V  +  LI  F +  K  +  EL  +M+   ++ D  I +
Sbjct: 658 NLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYN 717

Query: 371 MVVDL 375
             VD+
Sbjct: 718 FFVDM 722



 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 179/355 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN  TYN+II  LCK G   +A+ +  +M  + I PD V Y +LIHG         A +
Sbjct: 325 KPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANK 384

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM+ + + P  +T+  ++    + GK+ E   L   M+ R ++P+  TY+TL+D +C
Sbjct: 385 WFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYC 444

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A  L   M  MG   + V+Y  LI+G CK+ E++ A  L  EM  KG++  V 
Sbjct: 445 KAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN++  G+ +   +E A+KL +EM+   +  D  TY T ID  C+ G I +A +L + +
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM 564

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +  +  +N L++G C  G LE    L   +  + +V D +TYN ++   C    M
Sbjct: 565 LDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSM 624

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           +    ++  M    VAP+   +  LI G  +     +   L  +M EK  +P  +
Sbjct: 625 NTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVT 679



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 168/318 (52%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           I+ +  +YN +I+ LC      EA RL  +M  +   P VV+++ ++D  C  G++ +A 
Sbjct: 254 ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKAL 313

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
           +L+D M  + ++PN +TY++++   C  GK   AE++   M S     D+V Y  LI+G+
Sbjct: 314 KLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGF 373

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
            K   V  A   + EM+SK I P  +TY TL  G  +  +V     LF EM    +  D 
Sbjct: 374 FKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDE 433

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            TY T ID  CK G +V A  L   +  +    +I  Y  LIDGLCK G L+ A EL   
Sbjct: 434 VTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDE 493

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           + ++ L  +V  YN M++G+C  G +++A  L  +ME   + P+ I + T+I  + R+  
Sbjct: 494 MRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGD 553

Query: 347 PSKVIELLHKMKEKKVMP 364
             K  +LL +M ++ + P
Sbjct: 554 IDKAHKLLQEMLDRGLQP 571



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 191/362 (52%), Gaps = 4/362 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE-AKR 72
           PN + ++     L + G + +A+ L  ++    +   V + N+ +  + + ++  E A +
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F E    G+  +  ++N+I+  LC+ GK+ EA RLL  M  R   P+  +YST++DG+C
Sbjct: 248 VFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++ +A +L   M+  G K +  +YN +I   CK  +  EA  + REM+S+ I P  V
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y TL  G F++  V  A K F+EM    ++ D  TY T I G  + G ++E   LF  +
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D   Y  LID  CK+G +  A  L   + +  +  ++VTY  +I GLC  G++
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A++L  +M +  +  NV I+ ++++G  +     + I+L+ +M+   + PDA   + V
Sbjct: 485 DTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544

Query: 373 VD 374
           +D
Sbjct: 545 ID 546



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 163/301 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY T+ID  CK G +  A +L  +M    + P++VTY +LI GLC   + + A  
Sbjct: 430 KPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANE 489

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  +G+Q +V  +N +++ +CK G +++A +L+  M    + P+A TY+T++D +C
Sbjct: 490 LLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYC 549

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G I++A +L   M   G +   V++N+L+NG+C    +E+   L   M+ KGI P  +
Sbjct: 550 RLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAI 609

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL       + +    K+++ M+   VA D++TYN  I G CK   + EA  L++ +
Sbjct: 610 TYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEM 669

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   + +YN LI    K  ++  A ELF  +    LVAD   YN  +     +G +
Sbjct: 670 IEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDV 729

Query: 313 D 313
           +
Sbjct: 730 E 730



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 101/203 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TY T+ID  C+ G +DKA  L  +M    + P VVT+N L++G C      +  RL
Sbjct: 536 PDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRL 595

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+++G+ P  +T+N +M + C    M+  +++   M  + V P++ TY+ L+ G C 
Sbjct: 596 LGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCK 655

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +  A  L+  M   G      SYN LI  + K K++ EA  L+ EM   G+      
Sbjct: 656 ARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEI 715

Query: 194 YNTLFLGLFEIHQVEHALKLFEE 216
           YN      +E   VE  L L +E
Sbjct: 716 YNFFVDMCYEEGDVEITLNLCDE 738



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 10/261 (3%)

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE-VEEALS 177
           PN   +          G ++ A +L   + S G      S N  ++    N E +E A+ 
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           ++ E    GI     +YN +   L  + +V+ A +L  +M       D  +Y+T IDG C
Sbjct: 248 VFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
             G + +A++L   + I   + +   YN +I  LCK G+   A ++ R +  + ++ D V
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE---LL 354
            Y  +IHG    G +  A+  F +M    ++P+ I + TLI GF    +  KVIE   L 
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGF---GQGGKVIEPQNLF 421

Query: 355 HKMKEKKVMPDASIVSMVVDL 375
           H+M  + + PD    + ++D+
Sbjct: 422 HEMISRGLKPDEVTYTTLIDV 442



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 85/173 (49%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VT+N +++G C  G ++    L   M  + I PD +TYN+L+   C  N  N   +
Sbjct: 570 QPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTK 629

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++  M +QGV P   T+N+++   CK   + EA  L   M+++   P   +Y+ L+  F 
Sbjct: 630 IYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFY 689

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
              KI  A ELF  M   G   D   YN  ++   +  +VE  L+L  E + K
Sbjct: 690 KKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 78/150 (52%), Gaps = 4/150 (2%)

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR-LEIALELFRS 286
            ++ F   L + G++ EA +L   L      + + + N  +  +  +   +E+A+++F  
Sbjct: 192 AFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCE 251

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
                +  +  +YNI+I+ LC  G++ +AH L + M+  +  P+V+ + T+I G+  + +
Sbjct: 252 YG---ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGE 308

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             K ++L+  M+ K + P+    + ++ LL
Sbjct: 309 LKKALKLMDDMQIKGLKPNRYTYNSIILLL 338


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 195/364 (53%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN +++ LCK G +++AK +  QM      PD+ T+N+LI  LC  N   EA  L
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++  +GV P V TFN++++ LCK G    A RL + M      P+  TY+TL+D  C 
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+ +A +L   MES GC    ++YN +I+G CK   +EEA  ++ +M  +GI    +T
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +NTL  GL +  +++ A  L  +M  + +  +  TYN+ +   CK G I +A ++  T+ 
Sbjct: 499 FNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 558

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E+D+  Y  LI+GLCK+GR ++AL++ R +  + +      YN ++  L     + 
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIR 618

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK-VIELLHKMKEKKVMPDASIVSMV 372
            A  LF +M E    P+ + +  +  G  R   P K   + + +M +K  +P+ S   M+
Sbjct: 619 DALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRML 678

Query: 373 VDLL 376
            + L
Sbjct: 679 AEGL 682



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 190/365 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C    VT N +I+G CK G V+ A     Q   +   PD +TYN+ ++GLC  +    A 
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++   M+ +G  P V T+N++++ LCKNG+++EA  +L+ MV R   P+  T++TL+   
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++  A +L   +   G   D  ++NILIN  CK  +   AL L+ EM + G  P  
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL   L  + ++  AL L ++M+       T TYNT IDGLCK   I EA E+F  
Sbjct: 427 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +     +   +N LIDGLCK  +++ A  L   +    L  + +TYN ++   C  G 
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGD 546

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + KA D+   M  N    +V+ + TLI+G  +  +    +++L  M+ K + P     + 
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 606

Query: 372 VVDLL 376
           V+  L
Sbjct: 607 VLQSL 611



 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 184/350 (52%), Gaps = 1/350 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  T+NT+I  LC    +++A  L  Q+  + ++PDV T+N LI+ LC   D + A 
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RLF EM + G  P  VT+N ++D LC  GK+ +A  LL  M       +  TY+T++DG 
Sbjct: 412 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 471

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +I  AEE+F  M+  G   + +++N LI+G CK+K++++A  L  +M+S+G++P  
Sbjct: 472 CKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNN 531

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYN++     +   ++ A  + E M  +    D  TY T I+GLCK G    A+++ R 
Sbjct: 532 ITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRG 591

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC-NDG 310
           + I       +AYN ++  L +   +  AL LFR +       D +TY I+  GLC   G
Sbjct: 592 MRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGG 651

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            + +A D  L+M +    P    F  L  G + +      I  +  + EK
Sbjct: 652 PIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEK 701



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/323 (35%), Positives = 173/323 (53%), Gaps = 1/323 (0%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           I  D V YN L++ L   +     + ++ EM  +G++P VVTFN +M  LC+  ++  A 
Sbjct: 142 IQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 201

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
            +L+ M  R V P+  T++TLM GF   G I  A  +   M  MGC    V+ N+LINGY
Sbjct: 202 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 261

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           CK   VE+AL   ++ ++ G +P  +TYNT   GL +   V HALK+ + M ++    D 
Sbjct: 262 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 321

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            TYN  ++ LCKNG + EA  +   +    C  DI  +N LI  LC   RLE AL+L R 
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQ 381

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +  + +  DV T+NI+I+ LC  G    A  LF +M+ +   P+ + + TLI     + K
Sbjct: 382 VTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441

Query: 347 PSKVIELLHKMKEKKVMPDASIV 369
             K ++LL  M E    P ++I 
Sbjct: 442 LGKALDLLKDM-ESTGCPRSTIT 463



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 179/344 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+ T++ G  +EG ++ A  +  +M     +   VT N LI+G C      +A   
Sbjct: 214 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGY 273

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             + +  G +P  +T+N  ++ LC+N  +  A +++D+MVQ    P+ FTY+ +++  C 
Sbjct: 274 IQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK 333

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A+ +   M   GC  D  ++N LI   C    +EEAL L R++  KG+ P V T
Sbjct: 334 NGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYT 393

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L   L ++     AL+LFEEM+      D  TYNT ID LC  G + +A++L + + 
Sbjct: 394 FNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDME 453

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C      YN +IDGLCK  R+E A E+F  +  + +  + +T+N +I GLC D ++D
Sbjct: 454 STGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKID 513

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            A  L   M    + PN I + +++  + +     K  ++L  M
Sbjct: 514 DAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 181/353 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VT+NT++  LC+   V  A  +  +M    + PD  T+ +L+ G         A R
Sbjct: 178 KPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALR 237

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M++ G   + VT NV+++  CK G++++A   +   +     P+  TY+T ++G C
Sbjct: 238 VKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLC 297

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +  A ++   M   G   D  +YNI++N  CKN ++EEA  +  +MV +G  P + 
Sbjct: 298 QNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDIT 357

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL   L   +++E AL L  ++    V+ D  T+N  I+ LCK G    A+ LF  +
Sbjct: 358 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D   YN LID LC  G+L  AL+L + +         +TYN +I GLC   ++
Sbjct: 418 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 477

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++A ++F  M+   ++ N I F TLI G  +  K      L+++M  + + P+
Sbjct: 478 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPN 530



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 186/367 (50%), Gaps = 6/367 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + +TV YN +++ L +   +   ++++ +M    I PDVVT+N+L+  LC A+    A  
Sbjct: 143 QADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVL 202

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM  +GV P   TF  +M    + G ++ A R+   M++        T + L++G+C
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262

Query: 133 LTGKINRAEELFGSME---SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
              K+ R E+  G ++   + G + D ++YN  +NG C+N  V  AL +   MV +G  P
Sbjct: 263 ---KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V TYN +   L +  Q+E A  +  +M       D +T+NT I  LC    + EA++L 
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           R + +     D+  +N LI+ LCK G   +AL LF  +       D VTYN +I  LC+ 
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++ KA DL  DME      + I + T+I G  +  +  +  E+  +M  + +  +A   
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499

Query: 370 SMVVDLL 376
           + ++D L
Sbjct: 500 NTLIDGL 506



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 172/363 (47%), Gaps = 2/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    Y  II  L   G +D  K L  +M+ E     +   +S +        +++A  L
Sbjct: 72  PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131

Query: 74  FFEMMDQ--GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
               +    G+Q   V +N +++ L +  KM     +   M  R ++P+  T++TLM   
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++  A  +   M S G   D+ ++  L+ G+ +   +E AL +   M+  G   T 
Sbjct: 192 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT N L  G  ++ +VE AL   ++   D    D  TYNTF++GLC+N ++  A+++   
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D+  YN +++ LCK+G+LE A  +   +  R  + D+ T+N +I  LC   +
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A DL   +    V+P+V  F  LI+   ++  P   + L  +MK     PD    + 
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431

Query: 372 VVD 374
           ++D
Sbjct: 432 LID 434


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 121/337 (35%), Positives = 193/337 (57%), Gaps = 9/337 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + ++ N ++ GL KE      + ++ +M    I  +V+++N +++GLC     N A  
Sbjct: 117 KLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGD 176

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKN---GKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           +  +M   GV P+V+T+N ++D  CK    GKM +A  +L  MV + + PN  TY+ L+D
Sbjct: 177 VIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILID 236

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GFC    ++ A  +FG M+  G + + V+YNILING C + +V+EA++L  +MVS  ++P
Sbjct: 237 GFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEP 296

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VVT+N L  G  +   V  A+ LF +M++  V  +  TY T ID  CK+G + +A  L+
Sbjct: 297 NVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALY 356

Query: 250 RTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
             +   GI     ++  YNCLI GLC+ G ++ A  L   +  + L ADVVTYNI+I  L
Sbjct: 357 NMMIDRGIFP---EVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSL 413

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           C  G+  KA  L  +M E  + P+ + + TL+ G+ R
Sbjct: 414 CKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCR 450



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 118/361 (32%), Positives = 197/361 (54%), Gaps = 3/361 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC---HANDWNEAK 71
           N +++N +++GLCK G +++A  +   MK   ++P+V+TYN+LI G C         +A 
Sbjct: 154 NVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKAD 213

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  EM+ +G+ P+ VT+N+++D  CK+  +  A R+   M ++ +RPN  TY+ L++G 
Sbjct: 214 AILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGL 273

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK++ A  L   M S   + + V++N+LING+CKNK V EA++L+ +M  +G+ P  
Sbjct: 274 CSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNA 333

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY TL     +  ++E A  L+  M    +  + STYN  I GLC+ G +  A  L   
Sbjct: 334 MTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNE 393

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   K   D+  YN LID LCK G    A++L   +  + L    VTYN ++ G C +G 
Sbjct: 394 MVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGN 453

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +  A  +   ME      NV+    LI GF    +      LL++M E+ ++P+ +   +
Sbjct: 454 LRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEI 513

Query: 372 V 372
           +
Sbjct: 514 I 514



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 188/327 (57%), Gaps = 3/327 (0%)

Query: 51  VVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD 110
           +++ N L+ GL   ++  + + ++ EM+ + ++ +V++FN++++ LCK GK++ A  +++
Sbjct: 120 LISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIE 179

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINR---AEELFGSMESMGCKHDDVSYNILINGYC 167
            M    V PN  TY+TL+DG+C  G+I +   A+ +   M + G   ++V+YNILI+G+C
Sbjct: 180 DMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFC 239

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           K++ V  A+ ++ EM  +G++P VVTYN L  GL    +V+ A+ L ++M   D+  +  
Sbjct: 240 KDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVV 299

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           T+N  I+G CKN  + EA+ LF  +     + +   Y  LID  CK GR+E A  L+  +
Sbjct: 300 THNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMM 359

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
             R +  +V TYN +I GLC  G +  A  L  +M    ++ +V+ +  LI    +  + 
Sbjct: 360 IDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGES 419

Query: 348 SKVIELLHKMKEKKVMPDASIVSMVVD 374
            K ++LL +M EK + P     + ++D
Sbjct: 420 RKAVKLLDEMFEKGLNPSHVTYNTLMD 446



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/289 (38%), Positives = 164/289 (56%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTYN +IDG CK+  V  A  +F +M+ + + P+VVTYN LI+GLC     +EA  L
Sbjct: 226 PNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVAL 285

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+   ++P+VVT NV+++  CKN  ++EA  L + M ++ V PNA TY+TL+D +C 
Sbjct: 286 RDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCK 345

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A  L+  M   G   +  +YN LI G C+  +V+ A SL  EMVSK +   VVT
Sbjct: 346 DGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVT 405

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L   L +  +   A+KL +EM    +     TYNT +DG C+ G +  A+ +   + 
Sbjct: 406 YNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRME 465

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
               + ++  +N LI G C  GRLE A  L   +  R LV +  TY I+
Sbjct: 466 RKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEII 514



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/233 (40%), Positives = 134/233 (57%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTYN +I+GLC +G VD+A AL  QM   ++ P+VVT+N LI+G C     NEA  
Sbjct: 260 RPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAIN 319

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF +M  QGV P+ +T+  ++D  CK+G+M++A  L ++M+ R + P   TY+ L+ G C
Sbjct: 320 LFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLC 379

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  L   M S     D V+YNILI+  CK  E  +A+ L  EM  KG+ P+ V
Sbjct: 380 RKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHV 439

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           TYNTL  G      +  AL +   M+R    A+  T+N  I G C  G + +A
Sbjct: 440 TYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDA 492



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 163/306 (53%), Gaps = 3/306 (0%)

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F    D G + S+++ N ++  L K  +  +   +   M++R +  N  +++ +++G C 
Sbjct: 108 FKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCK 167

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE---ALSLYREMVSKGIKPT 190
            GK+NRA ++   M+  G   + ++YN LI+GYCK   + +   A ++ +EMV+KGI P 
Sbjct: 168 VGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPN 227

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            VTYN L  G  +   V  A+++F EMQR  +  +  TYN  I+GLC +G + EAV L  
Sbjct: 228 EVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRD 287

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +     E ++  +N LI+G CK+  +  A+ LF  + ++ +  + +TY  +I   C DG
Sbjct: 288 QMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDG 347

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +M+ A  L+  M +  + P V  +  LI G  R         L+++M  KK+  D    +
Sbjct: 348 RMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYN 407

Query: 371 MVVDLL 376
           +++D L
Sbjct: 408 ILIDSL 413



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 94/179 (52%), Gaps = 13/179 (7%)

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
           + +  + HA+     M  D    ++   +  +    +N  I+   E F+  G    +L +
Sbjct: 65  YSVSAIFHAI----SMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSL 120

Query: 262 QAYNCLIDGLCK---SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            + N L+ GL K   +G +E    ++R + +R +  +V+++NI+++GLC  G++++A D+
Sbjct: 121 ISCNPLLSGLVKESENGDMEF---VYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDV 177

Query: 319 FLDMEENAVAPNVIIFVTLIHGFV---RINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             DM+   V+PNVI + TLI G+    RI K  K   +L +M  K + P+    ++++D
Sbjct: 178 IEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILID 236


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 124/357 (34%), Positives = 189/357 (52%), Gaps = 2/357 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  VT N +I+G CK G V+ A     Q       PD +TYN+ ++GLC       A 
Sbjct: 251 CSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHAL 310

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++   M+ +G  P V T+N++++ LCKNG+++EA  +L+ MV+R   P+  T++TL+   
Sbjct: 311 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVAL 370

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++  A +L   +   G   D  ++NILIN  CK  + + AL L+ EM S G  P  
Sbjct: 371 CSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDE 430

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL   L  + ++  AL L +EM+       T TYNT IDGLCK   I EA E+F  
Sbjct: 431 VTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQ 490

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +     +   +N LIDGLCK  R++ A +L   +    L  + +TYN ++   C  G 
Sbjct: 491 MDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGD 550

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK--KVMPDA 366
           + KA D+   M  N    +V+ + TLI+G  +  +    ++LL  M+ K  +  P A
Sbjct: 551 IKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKA 607



 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 196/364 (53%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN +++ LCK G +++AK +  QM      PD+ T+N+LI  LC  N   EA  L
Sbjct: 323 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDL 382

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++  +G+ P V TFN++++ LCK G    A RL + M      P+  TY+TL+D  C 
Sbjct: 383 ARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCS 442

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+ +A +L   MES GC    V+YN +I+G CK   +EEA  ++ +M  +GI    +T
Sbjct: 443 LGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 502

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +NTL  GL +  +++ A +L  +M  + +  +  TYN+ +   CK G I +A ++ +T+ 
Sbjct: 503 FNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMT 562

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E+D+  Y  LI+GLCK+GR ++AL+L R +  + + A    YN +I  L       
Sbjct: 563 ANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTR 622

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP-SKVIELLHKMKEKKVMPDASIVSMV 372
            A +LF +M E    P+   +  +  G  R      +  + L +M +K  +P+ S   M+
Sbjct: 623 DAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRML 682

Query: 373 VDLL 376
            + L
Sbjct: 683 AEGL 686



 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 182/344 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+ T++ G  +EG +  A  +  +M     +P  VT N LI+G C      +A   
Sbjct: 218 PDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGY 277

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             + +  G +P  +T+N  ++ LC+NG +  A +++D+MVQ    P+ FTY+ +++  C 
Sbjct: 278 IQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK 337

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A+ +   M   GC  D  ++N LI   C    +EEAL L R++  KG+ P V T
Sbjct: 338 NGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYT 397

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L   L ++   + AL+LFEEM+      D  TYNT ID LC  G + +A++L + + 
Sbjct: 398 FNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEME 457

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C      YN +IDGLCK  R+E A E+F  +  + +  + +T+N +I GLC D ++D
Sbjct: 458 SAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRID 517

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            A+ L   M    + PN I + +++  + +     K  ++L  M
Sbjct: 518 DANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTM 561



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 185/361 (51%), Gaps = 1/361 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  T+NT+I  LC    +++A  L  Q+  + ++PDV T+N LI+ LC   D   A 
Sbjct: 356 CLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLAL 415

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RLF EM   G  P  VT+N ++D LC  GK+ +A  LL  M       +  TY+T++DG 
Sbjct: 416 RLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGL 475

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +I  AEE+F  M+  G   + +++N LI+G CK+K +++A  L  +M+S+G++P  
Sbjct: 476 CKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNN 535

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYN++     +   ++ A  + + M  +    D  TY T I+GLCK G    A++L R 
Sbjct: 536 ITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRG 595

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC-NDG 310
           + I       +AYN +I  L +      A+ LFR +       D  TY I+  GLC   G
Sbjct: 596 MRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGG 655

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            + +A D  L+M +    P    F  L  G + +      I  +  + EK  + D+ + +
Sbjct: 656 SIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIIEKADLGDSDVSA 715

Query: 371 M 371
           +
Sbjct: 716 I 716



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 188/360 (52%), Gaps = 2/360 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE G+  KP+ VT+NT++  LC+   V  A  +  +M    + PD  T+ +L+ G     
Sbjct: 177 GERGI--KPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEG 234

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
               A R+   M++ G  P+ VT NV+++  CK G++++A   +   +     P+  TY+
Sbjct: 235 SIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYN 294

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           T ++G C  G +  A ++   M   G   D  +YNI++N  CKN ++EEA  +  +MV +
Sbjct: 295 TFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVER 354

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G  P + T+NTL + L   +++E AL L  ++    ++ D  T+N  I+ LCK G    A
Sbjct: 355 GCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLA 414

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           + LF  +    C  D   YN LID LC  G+L  AL+L + +         VTYN +I G
Sbjct: 415 LRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDG 474

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC   ++++A ++F  M+   ++ N I F TLI G  +  +     +L+ +M  + + P+
Sbjct: 475 LCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPN 534



 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 113/312 (36%), Positives = 170/312 (54%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           I  D V YN L++ L   +     + ++ EM ++G++P VVTFN +M  LC+  ++  A 
Sbjct: 146 IQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAV 205

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
            +L+ M    V P+  T++TLM GF   G I  A  +   M  MGC    V+ N+LINGY
Sbjct: 206 LMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGY 265

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           CK   VE+AL   ++ ++ G +P  +TYNT   GL +   V HALK+ + M ++    D 
Sbjct: 266 CKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDV 325

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            TYN  ++ LCKNG + EA  +   +    C  DI  +N LI  LC   RLE AL+L R 
Sbjct: 326 FTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQ 385

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +  + L  DV T+NI+I+ LC  G    A  LF +M+ +   P+ + + TLI     + K
Sbjct: 386 VTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGK 445

Query: 347 PSKVIELLHKMK 358
             K ++LL +M+
Sbjct: 446 LGKALDLLKEME 457



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 185/367 (50%), Gaps = 6/367 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + +TV YN +++ L +   +   + ++ +M    I PDVVT+N+L+  LC A+    A  
Sbjct: 147 QADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVL 206

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM   GV P   TF  +M    + G +  A R+   M++    P   T + L++G+C
Sbjct: 207 MLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYC 266

Query: 133 LTGKINRAEELFGSME---SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
              K+ R E+  G ++   + G + D ++YN  +NG C+N  V  AL +   MV +G  P
Sbjct: 267 ---KLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDP 323

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V TYN +   L +  Q+E A  +  +M       D +T+NT I  LC    + EA++L 
Sbjct: 324 DVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLA 383

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           R + +     D+  +N LI+ LCK G  ++AL LF  +       D VTYN +I  LC+ 
Sbjct: 384 RQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSL 443

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++ KA DL  +ME      + + + T+I G  +  +  +  E+  +M  + +  +A   
Sbjct: 444 GKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 503

Query: 370 SMVVDLL 376
           + ++D L
Sbjct: 504 NTLIDGL 510



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 174/364 (47%), Gaps = 3/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFV-DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           P    Y  II  L       D  K L  +M+ E     V   +S +        + +A  
Sbjct: 75  PGPEVYEEIIRKLGAAAGAADLMKVLVTEMRREGHQVRVGVVHSFLESYARQQLFVDAVD 134

Query: 73  LFFEMMDQ--GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           L    +D   G+Q   V +N +++ L +  KM     +   M +R ++P+  T++TLM  
Sbjct: 135 LVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKA 194

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C   ++  A  +   M S G   D+ ++  L+ G+ +   ++ AL +   M+  G  PT
Sbjct: 195 LCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPT 254

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            VT N L  G  ++ +VE AL   ++   +    D  TYNTF++GLC+NG++  A+++  
Sbjct: 255 KVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMD 314

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +     + D+  YN +++ LCK+G+LE A  +   +  R  + D+ T+N +I  LC+  
Sbjct: 315 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGN 374

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++++A DL   +    ++P+V  F  LI+   ++  P   + L  +MK     PD    +
Sbjct: 375 RLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYN 434

Query: 371 MVVD 374
            ++D
Sbjct: 435 TLID 438


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/359 (33%), Positives = 199/359 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y T+IDG CK+G ++KAK LF +M    +  +  TY  LI+GL       +   +
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +M + GV P++ T+N +M++LCK+G+  +A ++ D M +R V  N  TY+TL+ G C 
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+N A ++   M+S G   + ++YN LI+G+C   ++ +ALSL R++ S+G+ P++VT
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G         A K+ +EM+   +     TY   ID   ++  + +A++L  ++ 
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            L    D+  Y+ LI G C  G++  A  LF+S+  +    + V YN MI G C +G   
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY 495

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +A  L  +MEE  +APNV  +  +I    +  K  +   L+ KM +  + P  SI+S++
Sbjct: 496 RALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 195/359 (54%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++  +I G C+ G ++K+  L +++     +P+VV Y +LI G C   +  +AK LFFEM
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
              G+  +  T+ V+++ L KNG   +   + + M +  V PN +TY+ +M+  C  G+ 
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A ++F  M   G   + V+YN LI G C+  ++ EA  +  +M S GI P ++TYNTL
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G   + ++  AL L  +++   ++    TYN  + G C+ G    A ++ + +     
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           +     Y  LID   +S  +E A++L  S+    LV DV TY+++IHG C  GQM++A  
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           LF  M E    PN +I+ T+I G+ +     + ++LL +M+EK++ P+ +    ++++L
Sbjct: 465 LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVL 523



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 168/353 (47%), Gaps = 1/353 (0%)

Query: 22  IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG 81
           +I G     F   +  L    + E        Y  +I+    +   N +   F EM+D G
Sbjct: 65  VISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNG 124

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
             P    FN ++  +  +   ++     +   +  V  + +++  L+ G C  G+I ++ 
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFN-ENKSKVVLDVYSFGILIKGCCEAGEIEKSF 183

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
           +L   +   G   + V Y  LI+G CK  E+E+A  L+ EM   G+     TY  L  GL
Sbjct: 184 DLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGL 243

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
           F+    +   +++E+MQ D V  +  TYN  ++ LCK+G   +A ++F  +       +I
Sbjct: 244 FKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNI 303

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
             YN LI GLC+  +L  A ++   +    +  +++TYN +I G C  G++ KA  L  D
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD 363

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           ++   ++P+++ +  L+ GF R    S   +++ +M+E+ + P     ++++D
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 73/135 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY  +ID   +   ++KA  L L M+   + PDV TY+ LIHG C     NEA R
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M+++  +P+ V +N ++   CK G    A +LL  M ++++ PN  +Y  +++  C
Sbjct: 465 LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC 524

Query: 133 LTGKINRAEELFGSM 147
              K   AE L   M
Sbjct: 525 KERKSKEAERLVEKM 539



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 36/218 (16%)

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y ++IN Y +++ +  ++S + EMV  G  P    +N L                     
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLL-------------------- 136

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                  +S++N +     +N                K  LD+ ++  LI G C++G +E
Sbjct: 137 --TFVVGSSSFNQWWSFFNENKS--------------KVVLDVYSFGILIKGCCEAGEIE 180

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            + +L   L       +VV Y  +I G C  G+++KA DLF +M +  +  N   +  LI
Sbjct: 181 KSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLI 240

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +G  +     +  E+  KM+E  V P+    + V++ L
Sbjct: 241 NGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 48/81 (59%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN V YNT+I G CKEG   +A  L  +M+ + + P+V +Y  +I  LC      EA+
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533

Query: 72  RLFFEMMDQGVQPSVVTFNVI 92
           RL  +M+D G+ PS    ++I
Sbjct: 534 RLVEKMIDSGIDPSTSILSLI 554


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/352 (34%), Positives = 197/352 (55%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           NT +YN II  LC+ G V +A  L +QM   +  PDVV+Y+++I G CH  +  +A +L 
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLM 316

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M  +G++P+  T+N I+  LCK GK  EA ++L  M+ + + P+   Y+TL+ GF   
Sbjct: 317 DDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKL 376

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +  A + F  M S     D ++Y  LI G+ +  +V E  +L+ EM+S+G+KP  VTY
Sbjct: 377 GHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTY 436

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            TL     +  ++ +A  L  EM +  +  +  TY   IDGLCK+G +  A EL   +  
Sbjct: 437 TTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRK 496

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              +L++  YN +++G+CK+G +E A++L + +    +  D +TY  +I   C  G +DK
Sbjct: 497 KGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDK 556

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           AH L  +M +  + P V+ F  L++GF  +        LL  M EK ++PDA
Sbjct: 557 AHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDA 608



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 200/360 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+Y+T+IDG C  G + KA  L   M+ + + P+  TYNS+I  LC      EA+++
Sbjct: 291 PDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKV 350

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EMM Q + P  V +  ++    K G +  A++  D M+ + + P+  TY+TL+ GF  
Sbjct: 351 LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQ 410

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+   + LF  M S G K D+V+Y  LI+ YCK  E+  A SL+ EMV  G+ P +VT
Sbjct: 411 GGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVT 470

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +  +++ A +L +EM++  +  +   YN+ ++G+CK G I +A++L + + 
Sbjct: 471 YGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEME 530

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   + D   Y  +ID  C+ G ++ A +L + +  R L   VVT+N++++G C  G ++
Sbjct: 531 VAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLE 590

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
               L   M E  + P+ I + TL+      N  +   ++  +M+ + V PD++  ++++
Sbjct: 591 DGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 180/365 (49%), Gaps = 6/365 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V Y T+I G  K G V  A   F +M  + I+PD +TY +LI G        E + L
Sbjct: 361 PDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNL 420

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+ +G++P  VT+  ++D  CK G+M  A  L + MVQ  + PN  TY  L+DG C 
Sbjct: 421 FHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCK 480

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A EL   M   G + +   YN ++NG CK   +E+A+ L +EM   GI P  +T
Sbjct: 481 HGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAIT 540

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           Y T+      +  ++ A KL +EM    +     T+N  ++G C  G + +   L   + 
Sbjct: 541 YTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWML 600

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             GI+    D   YN L+   C    +    ++++ +  + +  D  TYNI+I G C   
Sbjct: 601 EKGIVP---DAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKAR 657

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            + +A  L+ +M E    P V  +  LI  F +  K  +  EL  +M+   ++ D  I +
Sbjct: 658 NLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYN 717

Query: 371 MVVDL 375
             VD+
Sbjct: 718 FFVDM 722



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 179/355 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN  TYN+II  LCK G   +A+ +  +M  + I PD V Y +LIHG         A +
Sbjct: 325 KPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANK 384

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM+ + + P  +T+  ++    + GK+ E   L   M+ R ++P+  TY+TL+D +C
Sbjct: 385 WFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYC 444

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A  L   M  MG   + V+Y  LI+G CK+ E++ A  L  EM  KG++  V 
Sbjct: 445 KAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN++  G+ +   +E A+KL +EM+   +  D  TY T ID  C+ G I +A +L + +
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM 564

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +  +  +N L++G C  G LE    L   +  + +V D +TYN ++   C    M
Sbjct: 565 LDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSM 624

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           +    ++  M    VAP+   +  LI G  +     +   L  +M EK  +P  +
Sbjct: 625 NTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVT 679



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 168/318 (52%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           I+ +  +YN +I+ LC      EA RL  +M  +   P VV+++ ++D  C  G++ +A 
Sbjct: 254 ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKAL 313

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
           +L+D M  + ++PN +TY++++   C  GK   AE++   M S     D+V Y  LI+G+
Sbjct: 314 KLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGF 373

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
            K   V  A   + EM+SK I P  +TY TL  G  +  +V     LF EM    +  D 
Sbjct: 374 FKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDE 433

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            TY T ID  CK G +V A  L   +  +    +I  Y  LIDGLCK G L+ A EL   
Sbjct: 434 VTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDE 493

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           + ++ L  +V  YN M++G+C  G +++A  L  +ME   + P+ I + T+I  + R+  
Sbjct: 494 MRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGD 553

Query: 347 PSKVIELLHKMKEKKVMP 364
             K  +LL +M ++ + P
Sbjct: 554 IDKAHKLLQEMLDRGLQP 571



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 191/362 (52%), Gaps = 4/362 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE-AKR 72
           PN + ++     L + G + +A+ L  ++    +   V + N+ +  + + ++  E A +
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F E    G+  +  ++N+I+  LC+ GK+ EA RLL  M  R   P+  +YST++DG+C
Sbjct: 248 VFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++ +A +L   M+  G K +  +YN +I   CK  +  EA  + REM+S+ I P  V
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y TL  G F++  V  A K F+EM    ++ D  TY T I G  + G ++E   LF  +
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D   Y  LID  CK+G +  A  L   + +  +  ++VTY  +I GLC  G++
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A++L  +M +  +  NV I+ ++++G  +     + I+L+ +M+   + PDA   + V
Sbjct: 485 DTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544

Query: 373 VD 374
           +D
Sbjct: 545 ID 546



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 162/301 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY T+ID  CK G +  A +L  +M    + P++VTY +LI GLC   + + A  
Sbjct: 430 KPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANE 489

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  +G+Q +V  +N +++ +CK G +++A +L+  M    + P+A TY+T++D +C
Sbjct: 490 LLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYC 549

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G I++A +L   M   G +   V++N+L+NG+C    +E+   L   M+ KGI P  +
Sbjct: 550 RLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAI 609

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL       + +    K+++ M+   VA D++TYN  I G CK   + EA  L++ +
Sbjct: 610 TYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEM 669

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   + +YN LI    K  +   A ELF  +    LVAD   YN  +     +G +
Sbjct: 670 IEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDV 729

Query: 313 D 313
           +
Sbjct: 730 E 730



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 100/203 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TY T+ID  C+ G +DKA  L  +M    + P VVT+N L++G C      +  RL
Sbjct: 536 PDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRL 595

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+++G+ P  +T+N +M + C    M+  +++   M  + V P++ TY+ L+ G C 
Sbjct: 596 LGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCK 655

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +  A  L+  M   G      SYN LI  + K ++  EA  L+ EM   G+      
Sbjct: 656 ARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEI 715

Query: 194 YNTLFLGLFEIHQVEHALKLFEE 216
           YN      +E   VE  L L +E
Sbjct: 716 YNFFVDMCYEEGDVEITLNLCDE 738



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 10/261 (3%)

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE-VEEALS 177
           PN   +          G ++ A +L   + S G      S N  ++    N E +E A+ 
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           ++ E    GI     +YN +   L  + +V+ A +L  +M       D  +Y+T IDG C
Sbjct: 248 VFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
             G + +A++L   + I   + +   YN +I  LCK G+   A ++ R +  + ++ D V
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE---LL 354
            Y  +IHG    G +  A+  F +M    ++P+ I + TLI GF    +  KVIE   L 
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGF---GQGGKVIEPQNLF 421

Query: 355 HKMKEKKVMPDASIVSMVVDL 375
           H+M  + + PD    + ++D+
Sbjct: 422 HEMISRGLKPDEVTYTTLIDV 442



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 84/173 (48%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VT+N +++G C  G ++    L   M  + I PD +TYN+L+   C  N  N   +
Sbjct: 570 QPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTK 629

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++  M +QGV P   T+N+++   CK   + EA  L   M+++   P   +Y+ L+  F 
Sbjct: 630 IYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFY 689

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
              K   A ELF  M   G   D   YN  ++   +  +VE  L+L  E + K
Sbjct: 690 KKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 78/150 (52%), Gaps = 4/150 (2%)

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR-LEIALELFRS 286
            ++ F   L + G++ EA +L   L      + + + N  +  +  +   +E+A+++F  
Sbjct: 192 AFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCE 251

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
                +  +  +YNI+I+ LC  G++ +AH L + M+  +  P+V+ + T+I G+  + +
Sbjct: 252 YG---ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGE 308

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             K ++L+  M+ K + P+    + ++ LL
Sbjct: 309 LKKALKLMDDMQIKGLKPNRYTYNSIILLL 338


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 203/402 (50%), Gaps = 35/402 (8%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G + + CKPN+ T+  +I+G C+E  + +A  L  +M+  N+ P  V+Y ++I+GLCH  
Sbjct: 393 GMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCK 452

Query: 66  DWN-----------------------------------EAKRLFFEMMDQGVQPSVVTFN 90
           D +                                   EA+RL   M   GV P +  +N
Sbjct: 453 DLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYN 512

Query: 91  VIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
            I+  L K GKM+EAS  L  +  R ++P+A T+   + G+  TGK+  A + F  M   
Sbjct: 513 AIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDH 572

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G   ++  Y +LING+ K   + EALS++R + + G+ P V T +    GL +  +V+ A
Sbjct: 573 GLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEA 632

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           LK+F E++   +  D  TY++ I G CK G + +A EL   + +     +I  YN L+DG
Sbjct: 633 LKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDG 692

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LCKSG ++ A +LF  +P + L  D VTY+ MI G C    + +A  LF +M    V P+
Sbjct: 693 LCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPH 752

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             ++  L+HG  +     K + L  +M +K      S  +++
Sbjct: 753 SFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLI 794



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 121/363 (33%), Positives = 201/363 (55%), Gaps = 1/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   Y  +I+G  K G + +A ++F ++    + PDV T ++ IHGL       EA ++
Sbjct: 576 PNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKV 635

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E+ ++G+ P V T++ ++   CK G++++A  L D M  + + PN F Y+ L+DG C 
Sbjct: 636 FSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK 695

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G I RA +LF  M   G + D V+Y+ +I+GYCK++ V EA SL+ EM SKG++P    
Sbjct: 696 SGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFV 755

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +   +E A+ LF EM +   A  T ++NT IDG CK+  I EA +LF+ + 
Sbjct: 756 YNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMI 814

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +   D   Y  +ID  CK+G++E A  LF+ +  R L+ D VTY  +++G    GQ  
Sbjct: 815 AKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSS 874

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +   LF  M    V P+ + +  +I+   + +   +  +L  ++  K ++   +I  +++
Sbjct: 875 EVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLI 934

Query: 374 DLL 376
             L
Sbjct: 935 TAL 937



 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 120/362 (33%), Positives = 190/362 (52%), Gaps = 1/362 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V Y+ +I     EG +++A+ L   M    + PD+  YN++I  L  A    EA  
Sbjct: 470 KPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 529

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              E+  +G++P  VTF   +    K GKM EA++  D M+   + PN   Y+ L++G  
Sbjct: 530 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 589

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  +F  + ++G   D  + +  I+G  KN  V+EAL ++ E+  KG+ P V 
Sbjct: 590 KAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 649

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY++L  G  +  +VE A +L +EM    +A +   YN  +DGLCK+G I  A +LF  +
Sbjct: 650 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 709

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                E D   Y+ +IDG CKS  +  A  LF  +P + +      YN ++HG C +G M
Sbjct: 710 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 769

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +KA +LF +M +   A   + F TLI G+ +  K  +  +L  +M  K++MPD    + V
Sbjct: 770 EKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTV 828

Query: 373 VD 374
           +D
Sbjct: 829 ID 830



 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 186/360 (51%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N +TYN +I GLCK G ++KA  +   M      P+  T+  LI G C  ++   A  L 
Sbjct: 367 NLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELL 426

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM  + + PS V++  +++ LC    +  A++LL+ M    ++PN   YS L+  +   
Sbjct: 427 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASE 486

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+I  A  L   M   G   D   YN +I+   K  ++EEA +   E+  +G+KP  VT+
Sbjct: 487 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 546

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
               LG  +  ++  A K F+EM    +  +   Y   I+G  K G ++EA+ +FR L  
Sbjct: 547 GAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHA 606

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L    D+Q  +  I GL K+GR++ AL++F  L  + LV DV TY+ +I G C  G+++K
Sbjct: 607 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEK 666

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A +L  +M    +APN+ I+  L+ G  +     +  +L   M EK + PD+   S ++D
Sbjct: 667 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 726



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 193/363 (53%), Gaps = 3/363 (0%)

Query: 7    EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            E G+V  P+  TY+++I G CK+G V+KA  L  +M  + I P++  YN+L+ GLC + D
Sbjct: 641  EKGLV--PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGD 698

Query: 67   WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
               A++LF  M ++G++P  VT++ ++D  CK+  + EA  L   M  + V+P++F Y+ 
Sbjct: 699  IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNA 758

Query: 127  LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
            L+ G C  G + +A  LF  M   G     +S+N LI+GYCK+ +++EA  L++EM++K 
Sbjct: 759  LVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQ 817

Query: 187  IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            I P  VTY T+     +  ++E A  LF+EMQ  ++  DT TY + + G  K G   E  
Sbjct: 818  IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVF 877

Query: 247  ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
             LF  +     + D   Y  +I   CK   L  A +L   +  + ++     ++++I  L
Sbjct: 878  ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 937

Query: 307  CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            C    + +A  L  +M E  + P++    TL+  F    K  +   +   +K   ++PD 
Sbjct: 938  CKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDT 997

Query: 367  SIV 369
            + +
Sbjct: 998  TTL 1000



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 175/360 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   Y+ +I+G+C+ G +D+A  L   M  + + P+  TY  +  GLC A   NEAK  
Sbjct: 261 PNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLT 320

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM   G++P     + ++D   + G +DE  R+ D+MV   +  N  TY+ L+ G C 
Sbjct: 321 FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCK 380

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+ +A E+   M ++GCK +  ++ +LI GYC+   +  AL L  EM  + + P+ V+
Sbjct: 381 FGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 440

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  +  GL     +  A KL E+M    +  +   Y+  I      G I EA  L   + 
Sbjct: 441 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMS 500

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 DI  YN +I  L K+G++E A      +  R L  D VT+   I G    G+M 
Sbjct: 501 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 560

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A   F +M ++ + PN  ++  LI+G  +     + + +  ++    V+PD    S  +
Sbjct: 561 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFI 620



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/328 (32%), Positives = 168/328 (51%), Gaps = 3/328 (0%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            PN   YN ++DGLCK G + +A+ LF  M  + + PD VTY+++I G C + +  EA  L
Sbjct: 681  PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 740

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            F EM  +GVQP    +N ++   CK G M++A  L   M+Q+       +++TL+DG+C 
Sbjct: 741  FHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCK 799

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            + KI  A +LF  M +     D V+Y  +I+ +CK  ++EEA  L++EM  + +    VT
Sbjct: 800  SCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVT 859

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            Y +L  G  ++ Q      LFE+M    V  D  TY   I   CK   +VEA +L R   
Sbjct: 860  YTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL-RDEV 918

Query: 254  ILKCELDIQA-YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            + K  L     ++ LI  LCK   L  A +L   +    L   +   N ++      G+M
Sbjct: 919  VGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKM 978

Query: 313  DKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            D+A  +F  ++   + P+    + L++G
Sbjct: 979  DEATRVFEGVKSLGLVPDTTTLIDLVNG 1006



 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 165/306 (53%), Gaps = 1/306 (0%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            +P++VTY+T+IDG CK   V +A +LF +M  + + P    YN+L+HG C   D  +A  
Sbjct: 715  EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMN 774

Query: 73   LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            LF EM+ +G   + ++FN ++D  CK+ K+ EAS+L   M+ + + P+  TY+T++D  C
Sbjct: 775  LFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHC 833

Query: 133  LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              GK+  A  LF  M+      D V+Y  L+ GY K  +  E  +L+ +MV+KG+KP  V
Sbjct: 834  KAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEV 893

Query: 193  TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            TY  +     +   +  A KL +E+    +    + ++  I  LCK   + EA +L   +
Sbjct: 894  TYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEM 953

Query: 253  GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            G L  +  + A N L+    ++G+++ A  +F  +    LV D  T   +++G  ND   
Sbjct: 954  GELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDS 1013

Query: 313  DKAHDL 318
            + A +L
Sbjct: 1014 EDARNL 1019



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 187/370 (50%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           NG +      +  TY  ++  LCK G +  AK + ++M  + +NP+   Y+ +I G+C  
Sbjct: 217 NGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQV 276

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
            D +EA  L   M ++G+ P+  T+ +I   LC+  +M+EA    + M +  ++P+    
Sbjct: 277 GDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNAC 336

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           S L+DGF   G I+    +   M S G   + ++YN+LI+G CK  ++E+A  + + MV+
Sbjct: 337 SALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVT 396

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
            G KP   T+  L  G    H +  AL+L +EM++ ++     +Y   I+GLC    +  
Sbjct: 397 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSL 456

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A +L   +     + ++  Y+ LI      GR+E A  L   +    +  D+  YN +I 
Sbjct: 457 ANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 516

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            L   G+M++A    L+++   + P+ + F   I G+ +  K ++  +   +M +  +MP
Sbjct: 517 CLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMP 576

Query: 365 DASIVSMVVD 374
           +  + +++++
Sbjct: 577 NNPLYTVLIN 586



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 177/362 (48%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + V ++ +ID   + G +D+A  +F   K ++I   ++  NSL+  L          +++
Sbjct: 157 SPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVY 216

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M+D  +   V T+  ++  LCK G +  A R+L  M ++ + PN F YS +++G C  
Sbjct: 217 NGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQV 276

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G I+ A EL  SM   G   +  +Y I+  G C+ K + EA   + EM   G+KP     
Sbjct: 277 GDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNAC 336

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + L  G      ++  L++ + M    +  +  TYN  I GLCK G + +A E+ + +  
Sbjct: 337 SALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVT 396

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L C+ + + +  LI+G C+   +  ALEL   + +R LV   V+Y  MI+GLC+   +  
Sbjct: 397 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSL 456

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A+ L   M  + + PNV+++  LI  +    +  +   LL  M    V PD    + ++ 
Sbjct: 457 ANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 516

Query: 375 LL 376
            L
Sbjct: 517 CL 518



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 95/169 (56%)

Query: 15   NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
            +TVTY +++ G  K G   +  ALF +M  + + PD VTY  +I+  C  ++  EA +L 
Sbjct: 856  DTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLR 915

Query: 75   FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             E++ +G+       ++++  LCK   + EAS+LLD M +  ++P+    +TL+  F   
Sbjct: 916  DEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEA 975

Query: 135  GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
            GK++ A  +F  ++S+G   D  +   L+NG   + + E+A +L +++V
Sbjct: 976  GKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 119/354 (33%), Positives = 193/354 (54%), Gaps = 1/354 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY ++IDGLC EG  ++A ALF +  G+ I P+V+ YN+LI GL +     EA +L
Sbjct: 354 PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM ++G+ P V TFN++++ LCK G + +A  L+ +M+ +   P+ FT++ L+ G+  
Sbjct: 414 ANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+  A E+   M   G   D  +YN L+NG CK  + E+ +  Y+ MV KG  P + T
Sbjct: 474 QLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFT 533

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L   L    +++ AL L EEM+   V  D  T+ T IDG CKNG +  A  LFR + 
Sbjct: 534 FNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME 593

Query: 254 -ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K       YN +I    +   + +A +LF+ +  R L  D  TY +M+ G C  G +
Sbjct: 594 EAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNV 653

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +  +   L+M EN   P++     +I+     ++  +   ++H+M +K ++P+A
Sbjct: 654 NLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 199/397 (50%), Gaps = 36/397 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN  I GLC+ G +D A  +   +  +   PDV+TYN+LI+GLC  + + EA+  
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVY 308

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+++G++P   T+N ++   CK G +  A R++   V     P+ FTY +L+DG C 
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH 368

Query: 134 TGKINRAEELFGSMESMGCKHDDV-----------------------------------S 158
            G+ NRA  LF      G K + +                                   +
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +NIL+NG CK   V +A  L + M+SKG  P + T+N L  G     ++E+AL++ + M 
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
            + V  D  TYN+ ++GLCK     + +E ++T+    C  ++  +N L++ LC+  +L+
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD 548

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN-AVAPNVIIFVTL 337
            AL L   +  + +  D VT+  +I G C +G +D A+ LF  MEE   V+ +   +  +
Sbjct: 549 EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNII 608

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           IH F      +   +L  +M ++ + PD     ++VD
Sbjct: 609 IHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVD 645



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 191/398 (47%), Gaps = 35/398 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N V Y T++ G  +E F  +   LF +M    ++  + T+N L+  LC   D  E +
Sbjct: 177 CEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECE 236

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  +++ +GV P++ T+N+ +  LC+ G++D A R++  ++++  +P+  TY+ L+ G 
Sbjct: 237 KLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL 296

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN---------------------- 169
           C   K   AE   G M + G + D  +YN LI GYCK                       
Sbjct: 297 CKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356

Query: 170 -------------KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
                         E   AL+L+ E + KGIKP V+ YNTL  GL     +  A +L  E
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 416

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M    +  +  T+N  ++GLCK G + +A  L + +       DI  +N LI G     +
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +E ALE+   +    +  DV TYN +++GLC   + +   + +  M E   APN+  F  
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           L+    R  K  + + LL +MK K V PDA     ++D
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 188/365 (51%), Gaps = 1/365 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P++ TYNT+I G CK G V  A+ +          PD  TY SLI GLCH  + N A  
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF E + +G++P+V+ +N ++  L   G + EA++L + M ++ + P   T++ L++G C
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A+ L   M S G   D  ++NILI+GY    ++E AL +   M+  G+ P V 
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  GL +  + E  ++ ++ M     A +  T+N  ++ LC+   + EA+ L   +
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV-TYNIMIHGLCNDGQ 311
                  D   +  LIDG CK+G L+ A  LFR +     V+    TYNI+IH       
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLN 617

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +  A  LF +M +  + P+   +  ++ GF +    +   + L +M E   +P  + +  
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGR 677

Query: 372 VVDLL 376
           V++ L
Sbjct: 678 VINCL 682



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 185/389 (47%), Gaps = 35/389 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDV-------------------- 51
           C+P   +YN I+  L   G+ D+A  ++++M+   I PDV                    
Sbjct: 107 CEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAAL 166

Query: 52  ---------------VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
                          V Y +++ G    N   E   LF +M+  GV   + TFN ++  L
Sbjct: 167 RLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVL 226

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           CK G + E  +LLD +++R V PN FTY+  + G C  G+++ A  + G +   G K D 
Sbjct: 227 CKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDV 286

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           ++YN LI G CKN + +EA     +MV++G++P   TYNTL  G  +   V+ A ++  +
Sbjct: 287 ITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD 346

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
              +    D  TY + IDGLC  G    A+ LF        + ++  YN LI GL   G 
Sbjct: 347 AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGM 406

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +  A +L   +  + L+ +V T+NI+++GLC  G +  A  L   M      P++  F  
Sbjct: 407 ILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LIHG+    K    +E+L  M +  V PD
Sbjct: 467 LIHGYSTQLKMENALEILDVMLDNGVDPD 495



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 173/330 (52%), Gaps = 3/330 (0%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N  +G   KPN + YNT+I GL  +G + +A  L  +M  + + P+V T+N L++GLC  
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
              ++A  L   M+ +G  P + TFN+++       KM+ A  +LD+M+   V P+ +TY
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           ++L++G C T K     E + +M   GC  +  ++NIL+   C+ ++++EAL L  EM +
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKN 559

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTFIDGLCKNGYIV 243
           K + P  VT+ TL  G  +   ++ A  LF +M+    V++ T TYN  I    +   + 
Sbjct: 560 KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVT 619

Query: 244 EAVELFRTLGILKC-ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            A +LF+ + + +C   D   Y  ++DG CK+G + +  +    +     +  + T   +
Sbjct: 620 MAEKLFQEM-VDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRV 678

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           I+ LC + ++ +A  +   M +  + P  +
Sbjct: 679 INCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 182/396 (45%), Gaps = 38/396 (9%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVV--TYNSLIHGLCHANDWNEAKRLFF 75
           TY ++I+ L   G  +  + + + M+ EN+   ++   Y   +          EA  +F 
Sbjct: 42  TYRSVIEKLGYYGKFEAMEEVLVDMR-ENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFE 100

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
            M     +P+V ++N IM  L  +G  D+A ++   M  R + P+ ++++  M  FC T 
Sbjct: 101 RMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTS 160

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           + + A  L  +M S GC+ + V+Y  ++ G+ +     E   L+ +M++ G+   + T+N
Sbjct: 161 RPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFN 220

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL--- 252
            L   L +   V+   KL +++ +  V  +  TYN FI GLC+ G +  AV +   L   
Sbjct: 221 KLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ 280

Query: 253 --------------GILK------------------CELDIQAYNCLIDGLCKSGRLEIA 280
                         G+ K                   E D   YN LI G CK G +++A
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA 340

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
             +         V D  TY  +I GLC++G+ ++A  LF +     + PNVI++ TLI G
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                   +  +L ++M EK ++P+    +++V+ L
Sbjct: 401 LSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGL 436


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 192/364 (52%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYNT+I+ L K G +D+AK +  QM      PD  T+N+LI  LC  N   EA  L
Sbjct: 333 PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDL 392

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             E+  +G+ P V TFN++++ LCK G      RL + M      P+  TY+ L+D  C 
Sbjct: 393 ARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCS 452

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A +L   MES GC    V+YN +I+  CK   +EEA  ++ +M + GI  + VT
Sbjct: 453 MGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVT 512

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +NTL  GL +  +++ A +L E+M ++ +     TYN+ +   CK G + +A ++  T+ 
Sbjct: 513 FNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMT 572

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E+D+  Y  LI+GLCK+GR ++AL+L R +  + +      YN +I  L     + 
Sbjct: 573 ANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLR 632

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK-VIELLHKMKEKKVMPDASIVSMV 372
            A  LF +M E    P+ + +  +  G  R   P K   + L +M  K  MP+ S   M+
Sbjct: 633 DALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRML 692

Query: 373 VDLL 376
            + L
Sbjct: 693 AEGL 696



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 187/365 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  VT N +I+G CK G V+ A     +   +   PD VTYN+ +H LC     + A 
Sbjct: 261 CSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHAL 320

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++   M+ +G  P V T+N +++ L KNG++DEA  +++ MV R   P+  T++TL+   
Sbjct: 321 KVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 380

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++  A +L   +   G   D  ++NILIN  CK  +    + L+ EM S G  P  
Sbjct: 381 CSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDE 440

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN L   L  + ++ +AL L +EM+ +     T TYNT ID LCK   I EA E+F  
Sbjct: 441 VTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQ 500

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +           +N LIDGLCK+ R++ A EL   + +  L    +TYN ++   C  G 
Sbjct: 501 MDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGD 560

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + KA D+   M  N    +V+ + TLI+G  +  +    ++LL  M+ K + P     + 
Sbjct: 561 LKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNP 620

Query: 372 VVDLL 376
           V+  L
Sbjct: 621 VIQSL 625



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 186/361 (51%), Gaps = 1/361 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+T T+NT+I  LC +  +++A  L  ++  + ++PDV T+N LI+ LC   D +   
Sbjct: 366 CLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGI 425

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RLF EM   G  P  VT+N+++D LC  GK+  A  LL  M       +  TY+T++D  
Sbjct: 426 RLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDAL 485

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +I  AEE+F  M++ G     V++N LI+G CK K +++A  L  +MV +G++P+ 
Sbjct: 486 CKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSN 545

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYN++     +   ++ A  + E M  +    D  TY T I+GLCK G    A++L R 
Sbjct: 546 ITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRG 605

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN-DG 310
           + I       +AYN +I  L +   L  AL LFR +       D +TY I+  GLC   G
Sbjct: 606 MRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGG 665

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            + +A D  ++M      P    F  L  G + +     +I  +  + EK    ++ + +
Sbjct: 666 PIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKAKFRESDVSA 725

Query: 371 M 371
           +
Sbjct: 726 I 726



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 186/366 (50%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           EI    +P+ VTYNT +  LC+ G V  A  +   M  E  +PDV TYN++I+ L    +
Sbjct: 291 EIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGE 350

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            +EAK +  +M+D+G  P   TFN ++  LC   +++EA  L   +  + + P+ +T++ 
Sbjct: 351 LDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNI 410

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L++  C  G  +    LF  M+S GC  D+V+YNILI+  C   ++  AL L +EM S G
Sbjct: 411 LINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNG 470

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
              + VTYNT+   L +  ++E A ++F++M    ++    T+NT IDGLCK   I +A 
Sbjct: 471 CPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDAT 530

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           EL   +     +     YN ++   CK G L+ A ++  ++       DVVTY  +I+GL
Sbjct: 531 ELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGL 590

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C  G+   A  L   M    + P    +  +I    R N     + L  +M E    PDA
Sbjct: 591 CKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDA 650

Query: 367 SIVSMV 372
               +V
Sbjct: 651 LTYKIV 656



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 178/344 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+ T++ G  +EG ++ A  +  +M     +P  VT N LI+G C      +A   
Sbjct: 228 PDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGY 287

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             + +  G +P  VT+N  +  LC+NG +  A +++DLM+Q    P+ FTY+T+++    
Sbjct: 288 IQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSK 347

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A+ +   M   GC  D  ++N LI   C    +EEAL L RE+  KG+ P V T
Sbjct: 348 NGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYT 407

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L   L ++      ++LFEEM+    A D  TYN  ID LC  G +V A++L + + 
Sbjct: 408 FNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEME 467

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C      YN +ID LCK  R+E A E+F  +    +    VT+N +I GLC   ++D
Sbjct: 468 SNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRID 527

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            A +L   M +  + P+ I + +++  + +     K  ++L  M
Sbjct: 528 DATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETM 571



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 179/352 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT NT+I  LC+   V  A  +  +M    + PD  T+ +L+ G         A R
Sbjct: 192 QPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALR 251

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +MM+ G  P+ VT NV+++  CK G++++A   +   +     P+  TY+T +   C
Sbjct: 252 VKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLC 311

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A ++   M   G   D  +YN +IN   KN E++EA  +  +MV +G  P   
Sbjct: 312 QNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTT 371

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL + L   +++E AL L  E+    ++ D  T+N  I+ LCK G     + LF  +
Sbjct: 372 TFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM 431

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D   YN LID LC  G+L  AL+L + +         VTYN +I  LC   ++
Sbjct: 432 KSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRI 491

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           ++A ++F  M+ + ++ + + F TLI G  +  +     EL+ +M ++ + P
Sbjct: 492 EEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQP 543



 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/336 (33%), Positives = 170/336 (50%)

Query: 41  QMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
           Q+    +  D   YN L++ L   +     + ++ EM D+G+QP VVT N ++  LC+  
Sbjct: 150 QLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAH 209

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           ++  A  +L+ M    V P+  T++TLM GF   G I  A  +   M   GC    V+ N
Sbjct: 210 QVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVN 269

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           +LINGYCK   VE+AL   ++ ++ G +P  VTYNT    L +   V HALK+ + M ++
Sbjct: 270 VLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQE 329

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
               D  TYNT I+ L KNG + EA  +   +    C  D   +N LI  LC   RLE A
Sbjct: 330 GHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEA 389

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           L+L R L  + L  DV T+NI+I+ LC  G       LF +M+ +  AP+ + +  LI  
Sbjct: 390 LDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDH 449

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              + K    ++LL +M+           + ++D L
Sbjct: 450 LCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDAL 485



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 2/215 (0%)

Query: 162 LINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           L+    +  + E AL +    +++    P+   Y  +   L      +    L  EM+R+
Sbjct: 59  LLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRRE 118

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRT-LGILKCELDIQAYNCLIDGLCKSGRLEI 279
              A      +F++   +     +AV+L R  L     + D   YN L++ L +  R+++
Sbjct: 119 GHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKL 178

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
              ++  +  R +  DVVT N +I  LC   Q+  A  +  +M  +AVAP+   F TL+ 
Sbjct: 179 LESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQ 238

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           GF+        + +  KM E    P    V+++++
Sbjct: 239 GFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLIN 273


>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 562

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 115/328 (35%), Positives = 188/328 (57%), Gaps = 16/328 (4%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + +PN V YNTIID +CK+   + A  L+ +M  + I PDV TYN+LI+G C      
Sbjct: 234 GKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLK 293

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  LF +M  + + P V TFN+++D  CK G++ EA   L +M+++ ++P+  TY++LM
Sbjct: 294 DAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLM 353

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           D +CL  ++N+A+ +F +M   G   +  SY+I+IN +CK K V++A+ L++EM  K I 
Sbjct: 354 DRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIF 413

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEM----QRDDVAADTS------------TYNTF 232
           P V+TY++L  GL +  ++ +AL+L +EM    Q+ D+   T             TY   
Sbjct: 414 PNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTIL 473

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           IDGLCK G + +A  +F  L +    + +  Y  +I G C  G  + A+ L   +     
Sbjct: 474 IDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCC 533

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           + + VTY I+I  L ++ + DKA + F+
Sbjct: 534 IPNAVTYEIIIRSLFDNDENDKAENFFV 561



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 168/320 (52%), Gaps = 16/320 (5%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           L  ++ G+ + P++V YN++I  +C     N+A  L+ EM+ + + P V T+N +++  C
Sbjct: 228 LLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFC 287

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
             GK+ +A  L + M   ++ P+ +T++ L+D FC  G++  A+     M   G K D V
Sbjct: 288 IVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVV 347

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +YN L++ YC   EV +A S++  M  +G+   V +Y+ +     +I  V+ A+KLF+EM
Sbjct: 348 TYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEM 407

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVE----------------LFRTLGILKCELDI 261
               +  +  TY++ IDGLCK+G I  A+E                L R L       ++
Sbjct: 408 HHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNM 467

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
             Y  LIDGLCK GRLE A  +F  L  +     V TY +MIHG CN G  D+A  L   
Sbjct: 468 FTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSK 527

Query: 322 MEENAVAPNVIIFVTLIHGF 341
           M++N   PN + +  +I   
Sbjct: 528 MKDNCCIPNAVTYEIIIRSL 547



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 166/308 (53%), Gaps = 16/308 (5%)

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
           +QP++V +N I+D +CK+   ++A  L   MV + + P+  TY+ L++GFC+ GK+  A 
Sbjct: 237 LQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAI 296

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
            LF  M S     D  ++NIL++ +CK   V+EA +    M+ +GIKP VVTYN+L    
Sbjct: 297 GLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRY 356

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
             +++V  A  +F  M    V A+  +Y+  I+  CK   + +A++LF+ +   +   ++
Sbjct: 357 CLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNV 416

Query: 262 QAYNCLIDGLCKSGRLEIALEL----------------FRSLPRRVLVADVVTYNIMIHG 305
             Y+ LIDGLCKSGR+  ALEL                 R L  + +  ++ TY I+I G
Sbjct: 417 ITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDG 476

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC  G+++ A ++F D+        V  +  +IHGF       + + LL KMK+   +P+
Sbjct: 477 LCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPN 536

Query: 366 ASIVSMVV 373
           A    +++
Sbjct: 537 AVTYEIII 544



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 100/202 (49%)

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
            L L R +  K ++P +V YNT+   + +      A  L+ EM    +  D +TYN  I+
Sbjct: 225 PLQLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALIN 284

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
           G C  G + +A+ LF  +       D+  +N L+D  CK GR++ A      + ++ +  
Sbjct: 285 GFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKP 344

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           DVVTYN ++   C   +++KA  +F  M    V  NV  +  +I+ F +I    + ++L 
Sbjct: 345 DVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLF 404

Query: 355 HKMKEKKVMPDASIVSMVVDLL 376
            +M  K++ P+    S ++D L
Sbjct: 405 KEMHHKQIFPNVITYSSLIDGL 426


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 129/390 (33%), Positives = 201/390 (51%), Gaps = 41/390 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN +I+GLC EG +++A  L  +M+   + PDVV+YN+LI+G    +  +EA +L
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM ++GV+P+ VT N+++   CK GKMD+AS  +  M +    P+  TY+TL++G+C 
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430

Query: 134 TGKINRAEELFGSMESMGCKH--------------------------------------D 155
            G +  A   F +M+ MG K+                                      D
Sbjct: 431 AGNMGEA---FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFID 487

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
           +VSY  LI GY K+  V+ AL L+ EM  K I P+ VTYN +  GL +  + E A+    
Sbjct: 488 EVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLN 547

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
           E+    +  D +TYNT + G C+ G + +A +    +     + D+   N L+ GLC  G
Sbjct: 548 ELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEG 607

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
            LE AL+LF +   +    D VTYN +I  LC +G++D A +L  +MEE  + P+   + 
Sbjct: 608 VLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYN 667

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +I       +  +  E + KM EK  +PD
Sbjct: 668 AIITALTDSGRIREAEEFMSKMLEKGNLPD 697



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 197/367 (53%), Gaps = 2/367 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           ++G+V  PN  T+N +I G C E     A      M   N +PD VTYN+++  LC    
Sbjct: 201 KLGIV--PNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGR 258

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A+ L  +M  +G+ P+  T+N+++   CK G + EA+ +++LM Q ++ P+ +TY+ 
Sbjct: 259 LGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNM 318

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L++G C  G+I  A +L   ME++    D VSYN LING  +  ++ EA  L  EM  KG
Sbjct: 319 LINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKG 378

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +KP  VT+N +     +  +++ A     +M+    + D  TYNT I+G CK G + EA 
Sbjct: 379 VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAF 438

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
                +G    ++D    N ++  LC+  +LE A +L  S  +R    D V+Y  +I G 
Sbjct: 439 RTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGY 498

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             DG +D+A  L+ +M+E  + P+ + +  +I G  +  K  + I  L+++ E  ++PD 
Sbjct: 499 FKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDE 558

Query: 367 SIVSMVV 373
           +  + ++
Sbjct: 559 TTYNTIL 565



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 190/354 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYNTI+D LCK+G +  A+ L + MK   + P+  TYN L++G C      EA 
Sbjct: 239 CSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAA 298

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   M    + P V T+N++++ LC  G+++EA +L D M    + P+  +Y+TL++G 
Sbjct: 299 NVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGC 358

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               KI+ A +L   M   G K + V++NI++  YCK  ++++A +   +M   G  P  
Sbjct: 359 LEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDC 418

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  G  +   +  A +  +EM R ++  D+ T NT +  LC+   + EA +L  +
Sbjct: 419 VTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSS 478

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                  +D  +Y  LI G  K G ++ AL+L+  +  + ++   VTYN +I GLC  G+
Sbjct: 479 ARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGK 538

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            ++A     ++ E+ + P+   + T++HG+ R     K  +  +KM E    PD
Sbjct: 539 TEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPD 592



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/328 (33%), Positives = 169/328 (51%), Gaps = 2/328 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
            E GV  KPN VT+N ++   CKEG +D A     +M+    +PD VTYN+LI+G C A 
Sbjct: 375 SEKGV--KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
           +  EA R   EM  + ++   VT N I+  LC+  K++EA +LL    +R    +  +Y 
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYG 492

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+ G+   G ++RA +L+  M+        V+YN +I G C+  + E+A+S   E++  
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES 552

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G+ P   TYNT+  G      VE A +   +M  +    D  T N  + GLC  G + +A
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKA 612

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           ++LF T       +D   YN LI  LCK GRL+ A  L   +  + L  D  TYN +I  
Sbjct: 613 LKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITA 672

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVII 333
           L + G++ +A +    M E    P+ ++
Sbjct: 673 LTDSGRIREAEEFMSKMLEKGNLPDQVL 700



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 167/332 (50%), Gaps = 3/332 (0%)

Query: 48  NPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS- 106
           +P     ++ I     +   + A ++F +M    ++P+++T N +++ L +       S 
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191

Query: 107 --RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
                +  ++  + PN  T++ ++ G+CL  K   A E    M    C  D+V+YN +++
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD 251

Query: 165 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAA 224
             CK   + +A  L  +M S+G+ P   TYN L  G  ++  ++ A  + E M ++++  
Sbjct: 252 TLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLP 311

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           D  TYN  I+GLC  G I EA +L   +  LK   D+ +YN LI+G  +  ++  A +L 
Sbjct: 312 DVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLL 371

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
             +  + +  + VT+NIM+   C +G+MD A +    MEE+  +P+ + + TLI+G+ + 
Sbjct: 372 EEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKA 431

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               +    + +M  K +  D+  ++ ++  L
Sbjct: 432 GNMGEAFRTMDEMGRKNMKMDSVTLNTILRTL 463



 Score =  111 bits (278), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 117/248 (47%), Gaps = 23/248 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVTYN II GLC+ G  ++A +   ++    + PD  TYN+++HG C   D  +A + 
Sbjct: 521 PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M++   +P V T N+++  LC  G +++A +L +  V +    +  TY+TL+   C 
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP---- 189
            G+++ A  L   ME      D  +YN +I     +  + EA     +M+ KG  P    
Sbjct: 641 EGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVL 700

Query: 190 -------------------TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
                              + V Y+     L    + + A+++F E ++  +  D STY 
Sbjct: 701 QLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYI 760

Query: 231 TFIDGLCK 238
             +DGL K
Sbjct: 761 NLMDGLIK 768



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 23/182 (12%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  T N ++ GLC EG ++KA  LF     +    D VTYN+LI  LC     ++A  
Sbjct: 590 KPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFN 649

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF---------- 122
           L  EM ++ + P   T+N I+  L  +G++ EA   +  M+++   P+            
Sbjct: 650 LLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVV 709

Query: 123 -------------TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
                         YS  +   C  GK   A  +FG  +  G   D  +Y  L++G  K 
Sbjct: 710 TSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKR 769

Query: 170 KE 171
           ++
Sbjct: 770 RK 771


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 119/352 (33%), Positives = 185/352 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+   Y TIIDG+CKEG ++ A  +  +M    + P+VV YN+++ GLC A  W EA+
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM  +      VTFN+++D  C+NG +D    LL+ M+     P+  TY+T+++GF
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I+ A  L  SM S GCK + VSY I++ G C      +A  L  +M+ +G  P  
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NTL   L +   VE A++L ++M  +  + D  +Y+T IDGL K G   EA+EL   
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       +   Y+ +   L + GR+   +++F ++    + +D V YN +I  LC   +
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            D+A D F  M  N   PN   +  LI G        +  ELL ++  +  +
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 193/366 (52%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V C PN VT+NT+I  LC+ G  ++   +  QM      PD+  Y ++I G+C     
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A  +   M   G++P+VV +N ++  LC   +  EA  LL  M Q+D   +  T++ L
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D FC  G ++R  EL   M S GC  D ++Y  +ING+CK   ++EA+ L + M S G 
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP  V+Y  +  GL    +   A +L  +M +     +  T+NT I+ LCK G + +A+E
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L + + +  C  D+ +Y+ +IDGL K+G+ E ALEL   +  + +  + + Y+ +   L 
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            +G+++K   +F ++++  +  + +++  +I    +  +  + I+    M     MP+ S
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602

Query: 368 IVSMVV 373
             +M++
Sbjct: 603 TYTMLI 608



 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 189/362 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +T   N +++ +C++G VD+A  L  ++       D+V+YN+++ GLC A  W + +
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+     P++VTFN ++  LC+NG  +    +L  M +    P+   Y+T++DG 
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A E+   M S G K + V YN ++ G C  +  +EA  L  EM  K      
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD 356

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+N L     +   V+  ++L E+M       D  TY T I+G CK G I EAV L ++
Sbjct: 357 VTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ +  +Y  ++ GLC +GR   A EL   + ++    + VT+N +I+ LC  G 
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A +L   M  N  +P++I + T+I G  +  K  + +ELL+ M  K + P+  I S 
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536

Query: 372 VV 373
           + 
Sbjct: 537 IA 538



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 190/365 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ + V+YN ++ GLC        + L  +M   +  P++VT+N+LI  LC    +    
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVH 271

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  +M + G  P +  +  I+D +CK G ++ A+ +L+ M    ++PN   Y+T++ G 
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +   AEEL   M    C  DDV++NIL++ +C+N  V+  + L  +M+S G  P V
Sbjct: 332 CSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV 391

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY T+  G  +   ++ A+ L + M       +T +Y   + GLC  G  V+A EL   
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQ 451

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  +   +N LI+ LCK G +E A+EL + +       D+++Y+ +I GL   G+
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 511

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            ++A +L   M    ++PN II+ ++     R  + +KVI++   +K+  +  DA + + 
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNA 571

Query: 372 VVDLL 376
           V+  L
Sbjct: 572 VISSL 576



 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 173/365 (47%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P    Y+ I++  C+ G    +  +   M  +    D    N +++ +C     +EA 
Sbjct: 142 CAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAV 201

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  ++   G +  +V++N ++  LC   +  +   L+D MV+ D  PN  T++TL+   
Sbjct: 202 GLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G   R  E+   M   GC  D   Y  +I+G CK   +E A  +   M S G+KP V
Sbjct: 262 CRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNV 321

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YNT+  GL    + + A +L  EM + D   D  T+N  +D  C+NG +   +EL   
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ 381

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  D+  Y  +I+G CK G ++ A+ L +S+       + V+Y I++ GLC+ G+
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGR 441

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
              A +L   M +    PN + F TLI+   +     + IELL +M      PD    S 
Sbjct: 442 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 501

Query: 372 VVDLL 376
           V+D L
Sbjct: 502 VIDGL 506



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 159/324 (49%), Gaps = 3/324 (0%)

Query: 51  VVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD 110
           VV YN+++ G C A    +            V P+  TF  ++  LC  G++ +A  +LD
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
            M  +   P    Y  +++  C +G    +  +  +M + GC  D  + N+++N  C+  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
            V+EA+ L R++   G +  +V+YN +  GL    +     +L +EM R D A +  T+N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           T I  LC+NG      E+   +    C  DI+ Y  +IDG+CK G LE+A E+   +P  
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
            L  +VV YN ++ GLC+  +  +A +L  +M +     + + F  L+  F +     +V
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 351 IELLHKMKEKKVMPDASIVSMVVD 374
           IELL +M     MPD    + V++
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVIN 399



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 164/363 (45%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T+  ++ GLC  G +  A  +  +M  +   P    Y+ ++   C +  +  + R+
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +G        N++++ +C+ G +DEA  LL  +       +  +Y+ ++ G C+
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +    EEL   M  + C  + V++N LI   C+N   E    +  +M   G  P +  
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y T+  G+ +   +E A ++   M    +  +   YNT + GLC      EA EL   + 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C LD   +N L+D  C++G ++  +EL   +     + DV+TY  +I+G C +G +D
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  L   M      PN + +  ++ G     +     EL+ +M ++   P+    + ++
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 374 DLL 376
           + L
Sbjct: 469 NFL 471



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 169/357 (47%), Gaps = 3/357 (0%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V YN ++ G C+ G +  A+ L   +    + P+  T+  ++ GLC      +A  +  E
Sbjct: 80  VAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDE 136

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M  +G  P    ++VI++  C++G    + R+L+ M  +    +    + +++  C  G 
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           ++ A  L   +   GC+ D VSYN ++ G C  K   +   L  EMV     P +VT+NT
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L   L      E   ++  +M       D   Y T IDG+CK G++  A E+   +    
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            + ++  YN ++ GLC + R + A EL   + ++    D VT+NI++   C +G +D+  
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +L   M  +   P+VI + T+I+GF +     + + LL  M      P+    ++V+
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 119/352 (33%), Positives = 185/352 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+   Y TIIDG+CKEG ++ A  +  +M    + P+VV YN+++ GLC A  W EA+
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM  +      VTFN+++D  C+NG +D    LL+ M+     P+  TY+T+++GF
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I+ A  L  SM S GCK + VSY I++ G C      +A  L  +M+ +G  P  
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NTL   L +   VE A++L ++M  +  + D  +Y+T IDGL K G   EA+EL   
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       +   Y+ +   L + GR+   +++F ++    + +D V YN +I  LC   +
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            D+A D F  M  N   PN   +  LI G        +  ELL ++  +  +
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 193/366 (52%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V C PN VT+NT+I  LC+ G  ++   +  QM      PD+  Y ++I G+C     
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A  +   M   G++P+VV +N ++  LC   +  EA  LL  M Q+D   +  T++ L
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D FC  G ++R  EL   M S GC  D ++Y  +ING+CK   ++EA+ L + M S G 
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP  V+Y  +  GL    +   A +L  +M +     +  T+NT I+ LCK G + +A+E
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L + + +  C  D+ +Y+ +IDGL K+G+ E ALEL   +  + +  + + Y+ +   L 
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            +G+++K   +F ++++  +  + +++  +I    +  +  + I+    M     MP+ S
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602

Query: 368 IVSMVV 373
             +M++
Sbjct: 603 TYTMLI 608



 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 189/362 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +T   N +++ +C++G VD+A  L  ++       D+V+YN+++ GLC A  W + +
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+     P++VTFN ++  LC+NG  +    +L  M +    P+   Y+T++DG 
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A E+   M S G K + V YN ++ G C  +  +EA  L  EM  K      
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD 356

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+N L     +   V+  ++L E+M       D  TY T I+G CK G I EAV L ++
Sbjct: 357 VTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ +  +Y  ++ GLC +GR   A EL   + ++    + VT+N +I+ LC  G 
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A +L   M  N  +P++I + T+I G  +  K  + +ELL+ M  K + P+  I S 
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536

Query: 372 VV 373
           + 
Sbjct: 537 IA 538



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 190/365 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ + V+YN ++ GLC        + L  +M   +  P++VT+N+LI  LC    +    
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVH 271

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  +M + G  P +  +  I+D +CK G ++ A+ +L+ M    ++PN   Y+T++ G 
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +   AEEL   M    C  DDV++NIL++ +C+N  V+  + L  +M+S G  P V
Sbjct: 332 CSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV 391

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY T+  G  +   ++ A+ L + M       +T +Y   + GLC  G  V+A EL   
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQ 451

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  +   +N LI+ LCK G +E A+EL + +       D+++Y+ +I GL   G+
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 511

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            ++A +L   M    ++PN II+ ++     R  + +KVI++   +K+  +  DA + + 
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNA 571

Query: 372 VVDLL 376
           V+  L
Sbjct: 572 VISSL 576



 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 173/365 (47%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P    Y+ I++  C+ G    +  +   M  +    D    N +++ +C     +EA 
Sbjct: 142 CAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAV 201

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  ++   G +  +V++N ++  LC   +  +   L+D MV+ D  PN  T++TL+   
Sbjct: 202 GLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G   R  E+   M   GC  D   Y  +I+G CK   +E A  +   M S G+KP V
Sbjct: 262 CRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNV 321

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YNT+  GL    + + A +L  EM + D   D  T+N  +D  C+NG +   +EL   
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ 381

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  D+  Y  +I+G CK G ++ A+ L +S+       + V+Y I++ GLC+ G+
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGR 441

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
              A +L   M +    PN + F TLI+   +     + IELL +M      PD    S 
Sbjct: 442 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 501

Query: 372 VVDLL 376
           V+D L
Sbjct: 502 VIDGL 506



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 159/324 (49%), Gaps = 3/324 (0%)

Query: 51  VVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD 110
           VV YN+++ G C A    +            V P+  TF  ++  LC  G++ +A  +LD
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
            M  +   P    Y  +++  C +G    +  +  +M + GC  D  + N+++N  C+  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
            V+EA+ L R++   G +  +V+YN +  GL    +     +L +EM R D A +  T+N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           T I  LC+NG      E+   +    C  DI+ Y  +IDG+CK G LE+A E+   +P  
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
            L  +VV YN ++ GLC+  +  +A +L  +M +     + + F  L+  F +     +V
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 351 IELLHKMKEKKVMPDASIVSMVVD 374
           IELL +M     MPD    + V++
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVIN 399



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 164/363 (45%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T+  ++ GLC  G +  A  +  +M  +   P    Y+ ++   C +  +  + R+
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +G        N++++ +C+ G +DEA  LL  +       +  +Y+ ++ G C+
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +    EEL   M  + C  + V++N LI   C+N   E    +  +M   G  P +  
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y T+  G+ +   +E A ++   M    +  +   YNT + GLC      EA EL   + 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C LD   +N L+D  C++G ++  +EL   +     + DV+TY  +I+G C +G +D
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  L   M      PN + +  ++ G     +     EL+ +M ++   P+    + ++
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 374 DLL 376
           + L
Sbjct: 469 NFL 471



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 169/357 (47%), Gaps = 3/357 (0%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V YN ++ G C+ G +  A+ L   +    + P+  T+  ++ GLC      +A  +  E
Sbjct: 80  VAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDE 136

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M  +G  P    ++VI++  C++G    + R+L+ M  +    +    + +++  C  G 
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           ++ A  L   +   GC+ D VSYN ++ G C  K   +   L  EMV     P +VT+NT
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L   L      E   ++  +M       D   Y T IDG+CK G++  A E+   +    
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            + ++  YN ++ GLC + R + A EL   + ++    D VT+NI++   C +G +D+  
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +L   M  +   P+VI + T+I+GF +     + + LL  M      P+    ++V+
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 122/360 (33%), Positives = 202/360 (56%), Gaps = 3/360 (0%)

Query: 9   GVVC---KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GV C   + N V+Y  +I GLC+ G + +A   + +M+ +   P V TY  L+  LC + 
Sbjct: 245 GVFCVMPRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESG 304

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
              EA  LF EM ++G +P+V T+ V++D LCK G+MDEA ++L+ MV++ V P+   ++
Sbjct: 305 RELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFN 364

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+  +C  G +  A  + G MES     +  +YN LI G+C+ K ++ A++L  +MV  
Sbjct: 365 ALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVES 424

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            + P VVTYNTL  GL E+  V+ A +LF  M RD  + D  T+N F+  LC+ G + EA
Sbjct: 425 KLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEA 484

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            ++  +L     + +  AY  LIDG CK+G++E A  LF+ +     + + +T+N+MI G
Sbjct: 485 HQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDG 544

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           L  +G++  A  L  DM +  V P +  +  L+   ++     +  E+L+++      P+
Sbjct: 545 LRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPN 604



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 191/363 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P   TY  ++  LC+ G   +A +LF +M+     P+V TY  LI  LC     +EA 
Sbjct: 286 CFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEAL 345

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++  EM+++GV PSVV FN ++   CK G M++A  +L LM  + V PN  TY+ L+ GF
Sbjct: 346 KMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGF 405

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    ++RA  L   M       D V+YN LI+G C+   V+ A  L+R M+  G  P  
Sbjct: 406 CRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQ 465

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+N   + L  + +V  A ++ E ++   V A+   Y   IDG CK G I  A  LF+ 
Sbjct: 466 WTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKR 525

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +C  +   +N +IDGL K G+++ A+ L   + +  +   + TYNI++  +  +  
Sbjct: 526 MLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYD 585

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D+A+++   +  +   PNV+ +   I  +    +  +  E++ K+K + V+ D+ I ++
Sbjct: 586 FDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNL 645

Query: 372 VVD 374
           +++
Sbjct: 646 LIN 648



 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 180/361 (49%), Gaps = 4/361 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +T NT+++  CK G +  A+  F+++      PD+ TY SL+ G C  +D   A  +
Sbjct: 187 PNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGV 246

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M  +    + V++  ++  LC+ GK+ EA      M +    P   TY+ L+   C 
Sbjct: 247 FCVMPRR----NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCE 302

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G+   A  LFG M   GC+ +  +Y +LI+  CK   ++EAL +  EMV KG+ P+VV 
Sbjct: 303 SGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVP 362

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L     +   +E A+ +   M+   V  +  TYN  I G C+   +  A+ L   + 
Sbjct: 363 FNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMV 422

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K   D+  YN LI GLC+ G ++ A  LFR + R     D  T+N  +  LC  G++ 
Sbjct: 423 ESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVG 482

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +AH +   ++E  V  N   +  LI G+ +  K      L  +M  ++ +P++   ++++
Sbjct: 483 EAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMI 542

Query: 374 D 374
           D
Sbjct: 543 D 543



 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 190/413 (46%), Gaps = 65/413 (15%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC PN  TYN +I G C+   +D+A AL  +M    ++PDVVTYN+LIHGLC     + A
Sbjct: 391 VC-PNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSA 449

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            RLF  M+  G  P   TFN  M  LC+ G++ EA ++L+ + ++ V+ N   Y+ L+DG
Sbjct: 450 SRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDG 509

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +C  GKI  A  LF  M +  C  + +++N++I+G  K  +V++A+ L  +M    +KPT
Sbjct: 510 YCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPT 569

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF- 249
           + TYN L   + + +  + A ++   +       +  TY  FI   C  G + EA E+  
Sbjct: 570 LHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVI 629

Query: 250 ----------------------------RTLGILK------CELDIQAYNCLIDGLC--- 272
                                          G+L+      CE     Y+ L+  L    
Sbjct: 630 KIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEK 689

Query: 273 --KSGRLEIALE------------------------LFRSLPRRVLVADVVTYNIMIHGL 306
             K G   + L+                        LF  +     V ++ TY+ +I+GL
Sbjct: 690 HKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGL 749

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           C  G+++ A  L+  M E  ++P+ II  +L+    ++    + + LL  M E
Sbjct: 750 CKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMME 802



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 183/374 (48%), Gaps = 10/374 (2%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M N   E GV   P+ V +N +I   CK G ++ A  +   M+ + + P+V TYN LI G
Sbjct: 347 MLNEMVEKGVA--PSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICG 404

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
            C     + A  L  +M++  + P VVT+N ++  LC+ G +D ASRL  LM++    P+
Sbjct: 405 FCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPD 464

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
            +T++  M   C  G++  A ++  S++    K ++ +Y  LI+GYCK  ++E A SL++
Sbjct: 465 QWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFK 524

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            M+++   P  +T+N +  GL +  +V+ A+ L E+M + DV     TYN  ++ + K  
Sbjct: 525 RMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEY 584

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
               A E+   L     + ++  Y   I   C  GRLE A E+   +    ++ D   YN
Sbjct: 585 DFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYN 644

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           ++I+     G +D A  +   M      P+ + +  L+           VIE   K    
Sbjct: 645 LLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHL--------VIEKHKKEGSN 696

Query: 361 KVMPDASIVSMVVD 374
            V  D S+ ++ VD
Sbjct: 697 PVGLDVSLTNISVD 710



 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 182/365 (49%), Gaps = 7/365 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQM---KGENINPDVVTYNSLIHGLCHANDWNE 69
           K +  +YN ++  L +   VD+  +L+ +M    G ++ P+++T N++++  C   +   
Sbjct: 148 KLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAV 207

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+  F  ++     P + T+  ++   C+N  ++ A  +  +M +R    NA +Y+ L+ 
Sbjct: 208 ARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR----NAVSYTNLIH 263

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C  GK++ A E +  M   GC     +Y +L+   C++    EALSL+ EM  +G +P
Sbjct: 264 GLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEP 323

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V TY  L   L +  +++ ALK+  EM    VA     +N  I   CK G + +AV + 
Sbjct: 324 NVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVL 383

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +   K   +++ YN LI G C+   ++ A+ L   +    L  DVVTYN +IHGLC  
Sbjct: 384 GLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEV 443

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G +D A  LF  M  +  +P+   F   +    R+ +  +  ++L  +KEK V  +    
Sbjct: 444 GVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAY 503

Query: 370 SMVVD 374
           + ++D
Sbjct: 504 TALID 508



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 168/336 (50%), Gaps = 9/336 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N   Y  +IDG CK G ++ A +LF +M  E   P+ +T+N +I GL       +A  
Sbjct: 497 KANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAML 556

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M    V+P++ T+N++++E+ K    D A+ +L+ ++    +PN  TY+  +  +C
Sbjct: 557 LVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYC 616

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  AEE+   +++ G   D   YN+LIN Y     ++ A  + R M   G +P+ +
Sbjct: 617 SQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYL 676

Query: 193 TYNTLFLGL-FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           TY+ L   L  E H+ E +  +  ++   +++ D +   + ID      + +  V LF  
Sbjct: 677 TYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKID------FGITTV-LFEK 729

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  ++  Y+ LI+GLCK GRL +A  L+  +    +    + +N ++   C  G 
Sbjct: 730 MAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGM 789

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHG-FVRINK 346
             +A  L   M E +   ++  +  LI G F ++NK
Sbjct: 790 FGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNK 825



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 157/344 (45%), Gaps = 29/344 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN++T+N +IDGL KEG V  A  L   M   ++ P + TYN L+  +    D++ A 
Sbjct: 531 CLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRAN 590

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   ++  G QP+VVT+   +   C  G+++EA  ++  +    V  ++F Y+ L++ +
Sbjct: 591 EILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAY 650

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS-------------- 177
              G ++ A  +   M   GC+   ++Y+IL+      K  +E  +              
Sbjct: 651 GCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVD 710

Query: 178 ---------------LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
                          L+ +M   G  P + TY+ L  GL ++ ++  A  L+  M+   +
Sbjct: 711 NTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGI 770

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
           +     +N+ +   CK G   EAV L  ++        +++Y  LI GL +    E A  
Sbjct: 771 SPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEA 830

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           +F SL R     D V + ++I GL   G +D+  +L   ME+N 
Sbjct: 831 VFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNG 874



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 121/288 (42%), Gaps = 29/288 (10%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY   I   C +G +++A+ + +++K E +  D   YN LI+        + A  
Sbjct: 602 QPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFG 661

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR------------------------- 107
           +   M   G +PS +T++++M  L       E S                          
Sbjct: 662 VLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFG 721

Query: 108 ----LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILI 163
               L + M +    PN  TYS L++G C  G++N A  L+  M   G    ++ +N L+
Sbjct: 722 ITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLL 781

Query: 164 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVA 223
           +  CK     EA++L   M+       + +Y  L  GLFE    E A  +F  + R    
Sbjct: 782 SSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYN 841

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            D   +   IDGL K GY+ +  EL   +    C L  + Y+ L+  L
Sbjct: 842 YDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQEL 889



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 138/319 (43%), Gaps = 47/319 (14%)

Query: 85  SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELF 144
           S+ T + ++  L ++  +  A  + + M++    P+  T+  L++   L  ++N A    
Sbjct: 85  SLATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDATF--LLN---LLRRMNTAAAAA 139

Query: 145 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG------------------ 186
                +  K    SYN L+    +   V+E +SLY+EM++                    
Sbjct: 140 DHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSY 199

Query: 187 --------------------IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
                                 P + TY +L LG      VE A  +F  M R +     
Sbjct: 200 CKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAV--- 256

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            +Y   I GLC+ G + EA+E +  +    C   ++ Y  L+  LC+SGR   AL LF  
Sbjct: 257 -SYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGE 315

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +  R    +V TY ++I  LC +G+MD+A  +  +M E  VAP+V+ F  LI  + +   
Sbjct: 316 MRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGM 375

Query: 347 PSKVIELLHKMKEKKVMPD 365
               + +L  M+ KKV P+
Sbjct: 376 MEDAVGVLGLMESKKVCPN 394



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 11/196 (5%)

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD---VAADTSTYNTFIDGLCKNGYI 242
             K ++ +YN L + L     V+  + L++EM  D+   V  +  T NT ++  CK G +
Sbjct: 146 AFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNM 205

Query: 243 VEAVELFRTLGILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
             A   F  + IL+CE   D+  Y  L+ G C++  +E A  +F  +PRR    + V+Y 
Sbjct: 206 AVARLFF--VRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR----NAVSYT 259

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +IHGLC  G++ +A + +  M E+   P V  +  L+       +  + + L  +M+E+
Sbjct: 260 NLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRER 319

Query: 361 KVMPDASIVSMVVDLL 376
              P+    ++++D L
Sbjct: 320 GCEPNVYTYTVLIDYL 335



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 78/153 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TY+ +I+GLCK G ++ A +L+  M+   I+P  + +NSL+   C    + EA 
Sbjct: 735 CVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAV 794

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   MM+      + ++ +++  L +    ++A  +   +++     +   +  L+DG 
Sbjct: 795 TLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGL 854

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
             TG +++  EL   ME  GC+    +Y++L+ 
Sbjct: 855 AKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQ 887


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/362 (33%), Positives = 195/362 (53%), Gaps = 3/362 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC---HANDWNEA 70
           PN +T+NT+I+GLCK G ++KA  +   MK     P+VVTYN+LI G C         +A
Sbjct: 228 PNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKA 287

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             +  EM++  V P+ VTFNV++D  CK+  +  A ++ + M  + ++P   TY++L++G
Sbjct: 288 DAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNG 347

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  GK+N A+ L   M S   K + ++YN LINGYCK K +EEA  L+  +  +G+ P 
Sbjct: 348 LCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPN 407

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V+T+NTL  G  +  ++E A  L + M       + STYN  I G C+ G + E   L  
Sbjct: 408 VITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLN 467

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +     + D   YN LI   C+    + A  L   +  + L    +TYNI+++G C +G
Sbjct: 468 EMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEG 527

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            +  A +L   ME+     NV+ +  LI G+ R  K      LL++M EK ++P+ +   
Sbjct: 528 NLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYE 587

Query: 371 MV 372
           ++
Sbjct: 588 II 589



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 96/233 (41%), Positives = 146/233 (62%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VTYN++++GLC EG +++AK L  +M   N+ P+V+TYN+LI+G C      EA+ 
Sbjct: 335 KPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARE 394

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  +  QG+ P+V+TFN ++   CK GKM+EA  L  +M+++   PNA TY+ L+ GFC
Sbjct: 395 LFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFC 454

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+   + L   M+  G K D V+YNILI+ +C+ KE ++A  L  EM+ KG+KP+ +
Sbjct: 455 REGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHL 514

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           TYN L  G      +  AL L ++M+++   A+  TYN  I G C+ G + +A
Sbjct: 515 TYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDA 567



 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 194/354 (54%), Gaps = 8/354 (2%)

Query: 20  NTIIDGLCKEGFVDKAKAL-----FLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N+II  +    +V+ +K +     F +         V++ N L+  L   N++   + ++
Sbjct: 159 NSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVY 218

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC-- 132
            EM+ + + P+++TFN +++ LCK GK+++A  ++D M      PN  TY+TL+DG+C  
Sbjct: 219 KEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKM 278

Query: 133 -LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GK+ +A+ +   M       + V++N+LI+G+CK++ +  AL ++ EM S+G+KPTV
Sbjct: 279 GRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTV 338

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN+L  GL    ++  A  L +EM   ++  +  TYN  I+G CK   + EA ELF  
Sbjct: 339 VTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDN 398

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +G      ++  +N L+ G CK G++E A  L + +  +  + +  TYN +I G C +G+
Sbjct: 399 IGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGK 458

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           M++  +L  +M+   V  + + +  LI  +    +P K   L+ +M +K + P 
Sbjct: 459 MEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPS 512



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 163/304 (53%), Gaps = 3/304 (0%)

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F    D   + SV++ N ++  L K  +      +   M++R + PN  T++T+++G C 
Sbjct: 183 FKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCK 242

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV---EEALSLYREMVSKGIKPT 190
            GK+N+A ++   M+  G   + V+YN LI+GYCK   V    +A ++ +EMV   + P 
Sbjct: 243 VGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPN 302

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            VT+N L  G  +   +  ALK+FEEMQ   +     TYN+ ++GLC  G + EA  L  
Sbjct: 303 SVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLD 362

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +     + ++  YN LI+G CK   LE A ELF ++ ++ L  +V+T+N ++HG C  G
Sbjct: 363 EMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFG 422

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +M++A  L   M E    PN   +  LI GF R  K  +V  LL++M+ + V  D    +
Sbjct: 423 KMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYN 482

Query: 371 MVVD 374
           +++ 
Sbjct: 483 ILIS 486



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 148/308 (48%), Gaps = 13/308 (4%)

Query: 76  EMMDQG-VQPSVVT--FNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++M  G V P +V   FN    EL  N  ++   RLL+L+      P      +++D F 
Sbjct: 78  QLMGSGDVDPLLVLRYFNWSRRELNVNYSIELICRLLNLLANAKHYPKI---RSILDSF- 133

Query: 133 LTGKINRAEEL-FGSMESMGCKH--DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           + G+ N +  L F S+     +   + +  ++L+  Y +N +    L  ++       K 
Sbjct: 134 VKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKL 193

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           +V++ N L   L + ++      +++EM R  ++ +  T+NT I+GLCK G + +A ++ 
Sbjct: 194 SVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVV 253

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGR---LEIALELFRSLPRRVLVADVVTYNIMIHGL 306
             + +     ++  YN LIDG CK GR   +  A  + + +    +  + VT+N++I G 
Sbjct: 254 DDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGF 313

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C D  +  A  +F +M+   + P V+ + +L++G     K ++   LL +M    + P+ 
Sbjct: 314 CKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNV 373

Query: 367 SIVSMVVD 374
              + +++
Sbjct: 374 ITYNALIN 381


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 119/352 (33%), Positives = 185/352 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+   Y TIIDG+CKEG ++ A  +  +M    + P+VV YN+++ GLC A  W EA+
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM  +      VTFN+++D  C+NG +D    LL+ M+     P+  TY+T+++GF
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I+ A  L  SM S GCK + VSY I++ G C      +A  L  +M+ +G  P  
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NTL   L +   VE A++L ++M  +  + D  +Y+T IDGL K G   EA+EL   
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       +   Y+ +   L + GR+   +++F ++    + +D V YN +I  LC   +
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            D+A D F  M  N   PN   +  LI G        +  ELL ++  +  +
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 193/366 (52%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V C PN VT+NT+I  LC+ G  ++   +  QM      PD+  Y ++I G+C     
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A  +   M   G++P+VV +N ++  LC   +  EA  LL  M Q+D   +  T++ L
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D FC  G ++R  EL   M S GC  D ++Y  +ING+CK   ++EA+ L + M S G 
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP  V+Y  +  GL    +   A +L  +M +     +  T+NT I+ LCK G + +A+E
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L + + +  C  D+ +Y+ +IDGL K+G+ E ALEL   +  + +  + + Y+ +   L 
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            +G+++K   +F ++++  +  + +++  +I    +  +  + I+    M     MP+ S
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602

Query: 368 IVSMVV 373
             +M++
Sbjct: 603 TYTMLI 608



 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 189/362 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +T   N +++ +C++G VD+A  L  ++       D+V+YN+++ GLC A  W + +
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+     P++VTFN ++  LC+NG  +    +L  M +    P+   Y+T++DG 
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A E+   M S G K + V YN ++ G C  +  +EA  L  EM  K      
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD 356

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+N L     +   V+  ++L E+M       D  TY T I+G CK G I EAV L ++
Sbjct: 357 VTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ +  +Y  ++ GLC +GR   A EL   + ++    + VT+N +I+ LC  G 
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A +L   M  N  +P++I + T+I G  +  K  + +ELL+ M  K + P+  I S 
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536

Query: 372 VV 373
           + 
Sbjct: 537 IA 538



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 190/365 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ + V+YN ++ GLC        + L  +M   +  P++VT+N+LI  LC    +    
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVH 271

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  +M + G  P +  +  I+D +CK G ++ A+ +L+ M    ++PN   Y+T++ G 
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +   AEEL   M    C  DDV++NIL++ +C+N  V+  + L  +M+S G  P V
Sbjct: 332 CSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV 391

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY T+  G  +   ++ A+ L + M       +T +Y   + GLC  G  V+A EL   
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQ 451

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  +   +N LI+ LCK G +E A+EL + +       D+++Y+ +I GL   G+
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 511

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            ++A +L   M    ++PN II+ ++     R  + +KVI++   +K+  +  DA + + 
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNA 571

Query: 372 VVDLL 376
           V+  L
Sbjct: 572 VISSL 576



 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 173/365 (47%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P    Y+ I++  C+ G    +  +   M  +    D    N +++ +C     +EA 
Sbjct: 142 CAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAV 201

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  ++   G +  +V++N ++  LC   +  +   L+D MV+ D  PN  T++TL+   
Sbjct: 202 GLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G   R  E+   M   GC  D   Y  +I+G CK   +E A  +   M S G+KP V
Sbjct: 262 CRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNV 321

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YNT+  GL    + + A +L  EM + D   D  T+N  +D  C+NG +   +EL   
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ 381

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  D+  Y  +I+G CK G ++ A+ L +S+       + V+Y I++ GLC+ G+
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGR 441

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
              A +L   M +    PN + F TLI+   +     + IELL +M      PD    S 
Sbjct: 442 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 501

Query: 372 VVDLL 376
           V+D L
Sbjct: 502 VIDGL 506



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 159/324 (49%), Gaps = 3/324 (0%)

Query: 51  VVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD 110
           VV YN+++ G C A    +            V P+  TF  ++  LC  G++ +A  +LD
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
            M  +   P    Y  +++  C +G    +  +  +M + GC  D  + N+++N  C+  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
            V+EA+ L R++   G +  +V+YN +  GL    +     +L +EM R D A +  T+N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           T I  LC+NG      E+   +    C  DI+ Y  +IDG+CK G LE+A E+   +P  
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
            L  +VV YN ++ GLC+  +  +A +L  +M +     + + F  L+  F +     +V
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 351 IELLHKMKEKKVMPDASIVSMVVD 374
           IELL +M     MPD    + V++
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVIN 399



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 164/363 (45%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T+  ++ GLC  G +  A  +  +M  +   P    Y+ ++   C +  +  + R+
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +G        N++++ +C+ G +DEA  LL  +       +  +Y+ ++ G C+
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +    EEL   M  + C  + V++N LI   C+N   E    +  +M   G  P +  
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y T+  G+ +   +E A ++   M    +  +   YNT + GLC      EA EL   + 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C LD   +N L+D  C++G ++  +EL   +     + DV+TY  +I+G C +G +D
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  L   M      PN + +  ++ G     +     EL+ +M ++   P+    + ++
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 374 DLL 376
           + L
Sbjct: 469 NFL 471



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 169/357 (47%), Gaps = 3/357 (0%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V YN ++ G C+ G +  A+ L   +    + P+  T+  ++ GLC      +A  +  E
Sbjct: 80  VAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDE 136

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M  +G  P    ++VI++  C++G    + R+L+ M  +    +    + +++  C  G 
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           ++ A  L   +   GC+ D VSYN ++ G C  K   +   L  EMV     P +VT+NT
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L   L      E   ++  +M       D   Y T IDG+CK G++  A E+   +    
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            + ++  YN ++ GLC + R + A EL   + ++    D VT+NI++   C +G +D+  
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +L   M  +   P+VI + T+I+GF +     + + LL  M      P+    ++V+
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 119/352 (33%), Positives = 185/352 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+   Y TIIDG+CKEG ++ A  +  +M    + P+VV YN+++ GLC A  W EA+
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM  +      VTFN+++D  C+NG +D    LL+ M+     P+  TY+T+++GF
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I+ A  L  SM S GCK + VSY I++ G C      +A  L  +M+ +G  P  
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NTL   L +   VE A++L ++M  +  + D  +Y+T IDGL K G   EA+EL   
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       +   Y+ +   L + GR+   +++F ++    + +D V YN +I  LC   +
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            D+A D F  M  N   PN   +  LI G        +  ELL ++  +  +
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score =  210 bits (534), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 193/366 (52%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V C PN VT+NT+I  LC+ G  ++   +  QM      PD+  Y ++I G+C     
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A  +   M   G++P+VV +N ++  LC   +  EA  LL  M Q+D   +  T++ L
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D FC  G ++R  EL   M S GC  D ++Y  +ING+CK   ++EA+ L + M S G 
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP  V+Y  +  GL    +   A +L  +M +     +  T+NT I+ LCK G + +A+E
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L + + +  C  D+ +Y+ +IDGL K+G+ E ALEL   +  + +  + + Y+ +   L 
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            +G+++K   +F ++++  +  + +++  +I    +  +  + I+    M     MP+ S
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602

Query: 368 IVSMVV 373
             +M++
Sbjct: 603 TYTMLI 608



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 189/362 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +T   N +++ +C++G VD+A  L  ++       D+V+YN+++ GLC A  W + +
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+     P++VTFN ++  LC+NG  +    +L  M +    P+   Y+T++DG 
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A E+   M S G K + V YN ++ G C  +  +EA  L  EM  K      
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD 356

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+N L     +   V+  ++L E+M       D  TY T I+G CK G I EAV L ++
Sbjct: 357 VTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ +  +Y  ++ GLC +GR   A EL   + ++    + VT+N +I+ LC  G 
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A +L   M  N  +P++I + T+I G  +  K  + +ELL+ M  K + P+  I S 
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536

Query: 372 VV 373
           + 
Sbjct: 537 IA 538



 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 190/365 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ + V+YN ++ GLC        + L  +M   +  P++VT+N+LI  LC    +    
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVH 271

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  +M + G  P +  +  I+D +CK G ++ A+ +L+ M    ++PN   Y+T++ G 
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +   AEEL   M    C  DDV++NIL++ +C+N  V+  + L  +M+S G  P V
Sbjct: 332 CSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV 391

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY T+  G  +   ++ A+ L + M       +T +Y   + GLC  G  V+A EL   
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQ 451

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  +   +N LI+ LCK G +E A+EL + +       D+++Y+ +I GL   G+
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 511

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            ++A +L   M    ++PN II+ ++     R  + +KVI++   +K+  +  DA + + 
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNA 571

Query: 372 VVDLL 376
           V+  L
Sbjct: 572 VISSL 576



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 173/365 (47%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P    Y+ I++  C+ G    +  +   M  +    D    N +++ +C     +EA 
Sbjct: 142 CAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAV 201

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  ++   G +  +V++N ++  LC   +  +   L+D MV+ D  PN  T++TL+   
Sbjct: 202 GLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G   R  E+   M   GC  D   Y  +I+G CK   +E A  +   M S G+KP V
Sbjct: 262 CRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNV 321

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YNT+  GL    + + A +L  EM + D   D  T+N  +D  C+NG +   +EL   
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ 381

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  D+  Y  +I+G CK G ++ A+ L +S+       + V+Y I++ GLC+ G+
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGR 441

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
              A +L   M +    PN + F TLI+   +     + IELL +M      PD    S 
Sbjct: 442 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 501

Query: 372 VVDLL 376
           V+D L
Sbjct: 502 VIDGL 506



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 159/324 (49%), Gaps = 3/324 (0%)

Query: 51  VVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD 110
           VV YN+++ G C A    +            V P+  TF  ++  LC  G++ +A  +LD
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
            M  +   P    Y  +++  C +G    +  +  +M + GC  D  + N+++N  C+  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
            V+EA+ L R++   G +  +V+YN +  GL    +     +L +EM R D A +  T+N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           T I  LC+NG      E+   +    C  DI+ Y  +IDG+CK G LE+A E+   +P  
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
            L  +VV YN ++ GLC+  +  +A +L  +M +     + + F  L+  F +     +V
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 351 IELLHKMKEKKVMPDASIVSMVVD 374
           IELL +M     MPD    + V++
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVIN 399



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 164/363 (45%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T+  ++ GLC  G +  A  +  +M  +   P    Y+ ++   C +  +  + R+
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +G        N++++ +C+ G +DEA  LL  +       +  +Y+ ++ G C+
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +    EEL   M  + C  + V++N LI   C+N   E    +  +M   G  P +  
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y T+  G+ +   +E A ++   M    +  +   YNT + GLC      EA EL   + 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C LD   +N L+D  C++G ++  +EL   +     + DV+TY  +I+G C +G +D
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  L   M      PN + +  ++ G     +     EL+ +M ++   P+    + ++
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 374 DLL 376
           + L
Sbjct: 469 NFL 471



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 169/357 (47%), Gaps = 3/357 (0%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V YN ++ G C+ G +  A+ L   +    + P+  T+  ++ GLC      +A  +  E
Sbjct: 80  VAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDE 136

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M  +G  P    ++VI++  C++G    + R+L+ M  +    +    + +++  C  G 
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           ++ A  L   +   GC+ D VSYN ++ G C  K   +   L  EMV     P +VT+NT
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L   L      E   ++  +M       D   Y T IDG+CK G++  A E+   +    
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            + ++  YN ++ GLC + R + A EL   + ++    D VT+NI++   C +G +D+  
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +L   M  +   P+VI + T+I+GF +     + + LL  M      P+    ++V+
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 115/348 (33%), Positives = 195/348 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ +TYN++I+  CK   + +A      MK   + P+VVTY++LI   C A    EA 
Sbjct: 317 CEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEAN 376

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           + F +M+  G+QP+  T+  ++D  CK G ++EA +L   M Q  V  N  TY+ L+DG 
Sbjct: 377 KFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGL 436

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++  AEELFG++   G   +   Y  L +GY K K +E+A+ +  EM  K +KP +
Sbjct: 437 CEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDL 496

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           + Y T   GL   +++E ++ +  EM    + A++  Y T ID   K G   EAV L + 
Sbjct: 497 LLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQE 556

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  L  ++ +  Y  LIDGLCK G ++ A+  F  + R  L  +++ Y  +I GLC +  
Sbjct: 557 MQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDC 616

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           +++A +LF +M +  ++P+ +++ +LI G ++   P + + L ++M E
Sbjct: 617 LEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVE 664



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 197/399 (49%), Gaps = 39/399 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+  TYN +I  L +EG ++ A++LF +MK + + PD+VTYNSLI G         A  
Sbjct: 248 SPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVS 307

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM D G +P V+T+N +++  CK  ++ +A   L  M QR ++PN  TYSTL+D FC
Sbjct: 308 VFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFC 367

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A + F  M  +G + ++ +Y  LI+  CK  ++ EA  L  EM   G+   +V
Sbjct: 368 KAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIV 427

Query: 193 T-----------------------------------YNTLFLGLFEIHQVEHALKLFEEM 217
           T                                   Y +LF G  +   +E A+ + EEM
Sbjct: 428 TYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEM 487

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQA--YNCLIDGLCKSG 275
            + ++  D   Y T I GLC+   I +++ + R +  + C L   +  Y  LID   K G
Sbjct: 488 NKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREM--MDCGLTANSYIYTTLIDAYFKVG 545

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           +   A+ L + +    +   VVTY ++I GLC  G + +A   F  M  N + PN++I+ 
Sbjct: 546 KTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYT 605

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            LI G  + +   +   L ++M +K + PD  + + ++D
Sbjct: 606 ALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLID 644



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 193/364 (53%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC+P    ++T+ + L   G +++A+  F +M    + P V + N L+H L  ++    A
Sbjct: 176 VCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLA 235

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
              F +M+  G+ PSV T+N+++  L + G ++ A  L + M  + +RP+  TY++L+DG
Sbjct: 236 LSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDG 295

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G +  A  +F  M+  GC+ D ++YN LIN +CK + + +A      M  +G++P 
Sbjct: 296 YGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPN 355

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY+TL     +   +  A K F +M R  +  +  TY + ID  CK G + EA +L  
Sbjct: 356 VVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLES 415

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +      L+I  Y  L+DGLC+ GR+  A ELF +L +     +   Y  + HG     
Sbjct: 416 EMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAK 475

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            M+KA D+  +M +  + P+++++ T I G  R N+    + ++ +M +  +  ++ I +
Sbjct: 476 MMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYT 535

Query: 371 MVVD 374
            ++D
Sbjct: 536 TLID 539



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 177/353 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY+T+ID  CK G + +A   F+ M    + P+  TY SLI   C   D NEA +
Sbjct: 353 QPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFK 412

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM   GV  ++VT+  ++D LC++G+M EA  L   +++     N   Y++L  G+ 
Sbjct: 413 LESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYI 472

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               + +A ++   M     K D + Y   I G C+  E+E+++++ REM+  G+     
Sbjct: 473 KAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSY 532

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y TL    F++ +   A+ L +EMQ   +     TY   IDGLCK G + +AV  F  +
Sbjct: 533 IYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHM 592

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + +I  Y  LIDGLCK+  LE A  LF  +  + +  D + Y  +I G    G  
Sbjct: 593 TRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNP 652

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +A  L   M E  +  ++  + +LI GF R  +      LL +M  K ++PD
Sbjct: 653 GEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPD 705



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 94/175 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K   VTY  +IDGLCK G V +A   F  M    + P+++ Y +LI GLC  +   EAK 
Sbjct: 563 KITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKN 622

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM+D+G+ P  + +  ++D   K+G   EA  L + MV+  +  +   Y++L+ GF 
Sbjct: 623 LFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFS 682

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
             G++  A+ L   M   G   D V    L+  Y +  ++ EAL+L+ +M  +G+
Sbjct: 683 RYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGL 737


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 199/388 (51%), Gaps = 35/388 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VTYNT++D  CK+G V +A  L LQM+     P+ VTYN L++GL H+ +  +AK 
Sbjct: 187 RPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKE 246

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+  G++ S  T++ ++   C+ G++DEASRL + M+ R   P   TY+T+M G C
Sbjct: 247 LIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLC 306

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ A +L   M +     D VSYN LI GY +   + EA  L+ E+  +G+ P+VV
Sbjct: 307 KWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVV 366

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF--- 249
           TYNTL  GL  +  ++ A++L +EM +     D  T+   + G CK G +  A ELF   
Sbjct: 367 TYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEM 426

Query: 250 --------------RTLGILKC------------------ELDIQAYNCLIDGLCKSGRL 277
                         R +G LK                     D+  YN  IDGL K G L
Sbjct: 427 LNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNL 486

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A EL + +    LV D VTY  +IH     G + KA  +FL+M    + P+V+ +  L
Sbjct: 487 KEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVL 546

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPD 365
           IH +    +    I    +M EK V P+
Sbjct: 547 IHSYAVRGRLKLAILHFFEMHEKGVHPN 574



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 194/353 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTYNTI+ GLCK G V  A+ L   M  +N+ PD+V+YN+LI+G     +  EA  L
Sbjct: 293 PTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLL 352

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E+  +G+ PSVVT+N ++D LC+ G +D A RL D M++    P+ FT++ L+ GFC 
Sbjct: 353 FAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCK 412

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A+ELF  M + G + D  +Y   I G  K  +  +A  +  EM+++G  P ++T
Sbjct: 413 LGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLIT 472

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN    GL ++  ++ A +L ++M  + +  D  TY + I      G++ +A  +F  + 
Sbjct: 473 YNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEML 532

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  +  Y  LI      GRL++A+  F  +  + +  +V+TYN +I+GLC   +MD
Sbjct: 533 SKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMD 592

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +A+  F +M+   ++PN   +  LI+    +    + + L   M ++++ PD+
Sbjct: 593 QAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDS 645



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 191/349 (54%), Gaps = 1/349 (0%)

Query: 27  CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC-HANDWNEAKRLFFEMMDQGVQPS 85
            K+  ++K   +F +M  + + PD+   N ++  L    +  + A+ ++  M++ G++P+
Sbjct: 130 AKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPT 189

Query: 86  VVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFG 145
           VVT+N ++D  CK GK+ EA +LL  M +    PN  TY+ L++G   +G++ +A+EL  
Sbjct: 190 VVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQ 249

Query: 146 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 205
            M  +G +    +Y+ LI GYC+  +++EA  L  EM+S+G  PT+VTYNT+  GL +  
Sbjct: 250 EMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWG 309

Query: 206 QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYN 265
           +V  A KL + M   ++  D  +YNT I G  + G I EA  LF  L        +  YN
Sbjct: 310 RVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYN 369

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
            LIDGLC+ G L++A+ L   + +     DV T+ I++ G C  G +  A +LF +M   
Sbjct: 370 TLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNR 429

Query: 326 AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            + P+   ++T I G +++  PSK   +  +M  +   PD    ++ +D
Sbjct: 430 GLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFID 478



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 146/295 (49%), Gaps = 39/295 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+IDGLC+ G +D A  L  +M     +PDV T+  L+ G C   +   AK L
Sbjct: 363 PSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKEL 422

Query: 74  FFEMMDQGVQ-----------------------------------PSVVTFNVIMDELCK 98
           F EM+++G+Q                                   P ++T+NV +D L K
Sbjct: 423 FDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHK 482

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
            G + EAS L+  M+   + P+  TY++++    + G + +A  +F  M S G     V+
Sbjct: 483 LGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVT 542

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y +LI+ Y     ++ A+  + EM  KG+ P V+TYN L  GL ++ +++ A K F EMQ
Sbjct: 543 YTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQ 602

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
              ++ +  TY   I+  C  G+  EA+ L++ +     + +IQ  +C    L K
Sbjct: 603 AKGISPNKYTYTILINENCNLGHWQEALRLYKDM----LDREIQPDSCTHSALLK 653



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 155/307 (50%), Gaps = 6/307 (1%)

Query: 74  FFEMMDQ--GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           FF   ++  G + S +T+ VI+D L +NG M  A  +++ +V   +         L    
Sbjct: 67  FFRWAERQTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLL 126

Query: 132 CLTGKINRAEE---LFGSMESMGCKHDDVSYNILINGYC-KNKEVEEALSLYREMVSKGI 187
            +  K +  E+   +F  M S G   D  + N ++     ++  ++ A  +Y  MV  GI
Sbjct: 127 WIYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGI 186

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +PTVVTYNT+     +  +V+ AL+L  +MQ+     +  TYN  ++GL  +G + +A E
Sbjct: 187 RPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKE 246

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L + +  L  E+    Y+ LI G C+ G+L+ A  L   +  R  V  +VTYN +++GLC
Sbjct: 247 LIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLC 306

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G++  A  L   M    + P+++ + TLI+G+ R+    +   L  +++ + ++P   
Sbjct: 307 KWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVV 366

Query: 368 IVSMVVD 374
             + ++D
Sbjct: 367 TYNTLID 373



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 55/88 (62%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +TYN +I+GLCK   +D+A   F +M+ + I+P+  TY  LI+  C+   W EA RL
Sbjct: 573 PNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRL 632

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           + +M+D+ +QP   T + ++  L K+ K
Sbjct: 633 YKDMLDREIQPDSCTHSALLKHLNKDYK 660


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 196/398 (49%), Gaps = 35/398 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN--- 68
           C  N V YN +IDGLCK+  V +A  +   + G+++ PDVVTY +L++GLC   ++    
Sbjct: 258 CDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGL 317

Query: 69  --------------------------------EAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
                                           EA  L   ++D GV P++  +N ++D L
Sbjct: 318 EMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSL 377

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           CK  K  EA  L D M +  +RPN  TYS L+D FC  GK++ A    G M   G K   
Sbjct: 378 CKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV 437

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
             YN LING+CK  ++  A     EM++K ++PTVVTY +L  G     ++  AL+L+ E
Sbjct: 438 YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M    +A    T+ T + GL + G I +AV+LF  +     + +   YN +I+G C+ G 
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +  A E  + +  + +V D  +Y  +IHGLC  GQ  +A      + +     N I +  
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           L+HGF R  K  + + +  +M ++ V  D     +++D
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID 655



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 204/423 (48%), Gaps = 70/423 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VTY +++ G C +G ++KA  L+ +M G+ I P + T+ +L+ GL  A    +A +
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM +  V+P+ VT+NV+++  C+ G M +A   L  M ++ + P+ ++Y  L+ G C
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           LTG+ + A+     +    C+ +++ Y  L++G+C+  ++EEALS+ +EMV +G+   +V
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648

Query: 193 TYNTL------------FLGLF-EIHQ----------------------VEHALKLFEEM 217
            Y  L            F GL  E+H                        + A  +++ M
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG-----------------ILKCELD 260
             +    +  TY   I+GLCK G++ EA  L   +                  + K E+D
Sbjct: 709 INEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVD 768

Query: 261 IQ------------------AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
           +Q                   YN LI G C+ GR+E A EL   +    +  D +TY  M
Sbjct: 769 MQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTM 828

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I+ LC    + KA +L+  M E  + P+ + + TLIHG     +  K  EL ++M  + +
Sbjct: 829 INELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888

Query: 363 MPD 365
           +P+
Sbjct: 889 IPN 891



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 181/371 (48%), Gaps = 2/371 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G+IG+  +PN VTY+ +ID  C+ G +D A +   +M    +   V  YNSLI+G C   
Sbjct: 394 GKIGL--RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFG 451

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
           D + A+    EM+++ ++P+VVT+  +M   C  GK+++A RL   M  + + P+ +T++
Sbjct: 452 DISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+ G    G I  A +LF  M     K + V+YN++I GYC+  ++ +A    +EM  K
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           GI P   +Y  L  GL    Q   A    + + + +   +   Y   + G C+ G + EA
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           + + + +     +LD+  Y  LIDG  K    ++   L + +  R L  D V Y  MI  
Sbjct: 632 LSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDA 691

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
               G   +A  ++  M      PN + +  +I+G  +    ++   L  KM+    +P+
Sbjct: 692 KSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPN 751

Query: 366 ASIVSMVVDLL 376
                  +D+L
Sbjct: 752 QVTYGCFLDIL 762



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 174/361 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   T + ++ GL K      A  LF  M    I PDV  Y  +I  LC   D + AK +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   G   ++V +NV++D LCK  K+ EA  +   +  +D++P+  TY TL+ G C 
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +     E+   M  +     + + + L+ G  K  ++EEAL+L + +V  G+ P +  
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L   L +  +   A  LF+ M +  +  +  TY+  ID  C+ G +  A+     + 
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +L +  YN LI+G CK G +  A      +  + L   VVTY  ++ G C+ G+++
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA  L+ +M    +AP++  F TL+ G  R       ++L ++M E  V P+    ++++
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549

Query: 374 D 374
           +
Sbjct: 550 E 550



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 150/289 (51%), Gaps = 10/289 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N + Y  ++ G C+EG +++A ++  +M    ++ D+V Y  LI G     D    +
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD----R 663

Query: 72  RLFF----EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +LFF    EM D+G++P  V +  ++D   K G   EA  + DLM+     PN  TY+ +
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK-EVEEALSLYREMVSKG 186
           ++G C  G +N AE L   M+ +    + V+Y   ++   K + ++++A+ L+  ++ KG
Sbjct: 724 INGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KG 782

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +     TYN L  G     ++E A +L   M  D V+ D  TY T I+ LC+   + +A+
Sbjct: 783 LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAI 842

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           EL+ ++       D  AYN LI G C +G +  A EL   + R+ L+ +
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 114/220 (51%), Gaps = 2/220 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V Y ++ID   K G   +A  ++  M  E   P+ VTY ++I+GLC A   NEA+ 
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEV 738

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMD-EASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           L  +M      P+ VT+   +D L K G++D + +  L   + + +  N  TY+ L+ GF
Sbjct: 739 LCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATYNMLIRGF 797

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+I  A EL   M   G   D ++Y  +IN  C+  +V++A+ L+  M  KGI+P  
Sbjct: 798 CRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDR 857

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           V YNTL  G     ++  A +L  EM R  +  +  T  T
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 112/219 (51%), Gaps = 1/219 (0%)

Query: 159 YNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +++LI  Y +++ V + + +++ M++K  + P V T + L  GL +      A++LF +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
               +  D   Y   I  LC+   +  A E+   +    C+++I  YN LIDGLCK  ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A+ + + L  + L  DVVTY  +++GLC   + +   ++  +M     +P+     +L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + G  +  K  + + L+ ++ +  V P+  + + ++D L
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSL 377



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           IG    P+ +TY T+I+ LC+   V KA  L+  M  + I PD V YN+LIHG C A + 
Sbjct: 814 IGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEM 873

Query: 68  NEAKRLFFEMMDQGVQPS 85
            +A  L  EM+ QG+ P+
Sbjct: 874 GKATELRNEMLRQGLIPN 891


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 124/362 (34%), Positives = 194/362 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY  +ID LC  G ++ AK LF++MK     PD V Y +L+       D +  K
Sbjct: 293 CGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFK 352

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             + +M   G  P VVTF +++D LCK    DEA    D+M ++ + PN  TY+TL+ G 
Sbjct: 353 EFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGL 412

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+I  A +L G+MES+G +    +YNI I+ + K+ E  +A+  + +M +KGI P +
Sbjct: 413 LRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNI 472

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V  N     L E+ ++  A  +F  ++ + +A D+ TYN  +    K G + EAV L   
Sbjct: 473 VACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSE 532

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    CE D+   N LID L K+GR++ A ++F  +    L   VVTYN ++ GL  +G+
Sbjct: 533 MIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGR 592

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + KA +LF  M E   +PN I F TL+  F + ++    +++  KM      PD    + 
Sbjct: 593 VQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNT 652

Query: 372 VV 373
           V+
Sbjct: 653 VI 654



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 190/353 (53%), Gaps = 1/353 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V Y T++D     G +D  K  + QM+ +   PDVVT+  L+  LC A D++EA  
Sbjct: 329 KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFA 388

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F  M  QG+ P++ T+N ++  L + G++++A +LL  M    V+P A+TY+  +D F 
Sbjct: 389 TFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFG 448

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G+  +A E F  M++ G   + V+ N  +    +   + EA +++  +   G+ P  V
Sbjct: 449 KSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSV 508

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN +     ++ QV+ A+ L  EM R+    D    N+ ID L K G + EA ++F  +
Sbjct: 509 TYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRM 568

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +K    +  YN L+ GL K GR++ A+ELF S+  +    + +++N ++   C + ++
Sbjct: 569 KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEV 628

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + A  +F  M      P+V+ + T+I+G ++ NK +      H++K K + PD
Sbjct: 629 ELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPD 680



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 188/340 (55%), Gaps = 1/340 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+  ++D LCK    D+A A F  M+ + I P++ TYN+LI GL  A    +A +L
Sbjct: 365 PDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKL 424

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   GVQP+  T+N+ +D   K+G+  +A    + M  + + PN    +  +     
Sbjct: 425 LGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAE 484

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A+ +F  +   G   D V+YN+++  Y K  +V+EA++L  EM+  G +P V+ 
Sbjct: 485 MGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIV 544

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            N+L   L++  +V+ A ++F+ M+   ++    TYNT + GL K G + +A+ELF ++ 
Sbjct: 545 VNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMI 604

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             KC  +  ++N L+D  CK+  +E+AL++F  +       DV+TYN +I+GL  + +++
Sbjct: 605 EKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVN 664

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            A   F  +++ ++ P+ +   TL+ G V+  +    I +
Sbjct: 665 HAFWFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISI 703



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 180/352 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY+ ++  L K+   +    L  +M+   + P+V T+   I  L  A   +EA  
Sbjct: 224 KPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYE 283

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  M D+G  P +VT+ V++D LC  G+++ A  L   M     +P+   Y TL+D F 
Sbjct: 284 IFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFN 343

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++  +E +  ME+ G   D V++ IL++  CK ++ +EA + +  M  +GI P + 
Sbjct: 344 DFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLH 403

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GL    ++E ALKL   M+   V     TYN FID   K+G   +AVE F  +
Sbjct: 404 TYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKM 463

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +I A N  +  L + GRL  A  +F  L    L  D VTYN+M+      GQ+
Sbjct: 464 KAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQV 523

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           D+A +L  +M  N   P+VI+  +LI    +  +  +  ++  +MK+ K+ P
Sbjct: 524 DEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSP 575



 Score =  177 bits (449), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 183/367 (49%), Gaps = 3/367 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNT+++NT++D  CK   V+ A  +F +M   +  PDV+TYN++I+GL   N  N A 
Sbjct: 608 CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHA- 666

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA-SRLLDLMVQRDVRPNAFTYSTLMDG 130
             FF  + + + P  VT   ++  L K G++ +A S   D M Q   R N   +  LM G
Sbjct: 667 FWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGG 726

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKP 189
             +  ++++A      +   G   +D     L+   CK+K    A  ++ +   K GI P
Sbjct: 727 TLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISP 786

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           T+ +YN L   L E+H  E A  LF++M+    A D  T+N  +    K+G I E  EL+
Sbjct: 787 TLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELY 846

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + +   +C+ D   YN +I  L KS  L+ AL+ F  L          TY  +I GL   
Sbjct: 847 KEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKV 906

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++++A  LF +M +    PN  IF  LI+G+ +I       +L  +M  + + PD    
Sbjct: 907 GRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSY 966

Query: 370 SMVVDLL 376
           +++VD L
Sbjct: 967 TILVDCL 973



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 184/362 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  +YN +I  L + GF  +A  ++ +M  E + P + TY++L+  L    D      L 
Sbjct: 191 NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLL 250

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM D G++P+V TF + +  L + GK+DEA  +   M      P+  TY+ L+D  C  
Sbjct: 251 KEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNA 310

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G++  A+ELF  M++ G K D V Y  L++ +    +++     + +M + G  P VVT+
Sbjct: 311 GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTF 370

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L   L +    + A   F+ M++  +  +  TYNT I GL + G I +A++L  T+  
Sbjct: 371 TILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMES 430

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           +  +     YN  ID   KSG    A+E F  +  + +V ++V  N  ++ L   G++ +
Sbjct: 431 VGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLRE 490

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  +F  + EN +AP+ + +  ++  + ++ +  + + LL +M      PD  +V+ ++D
Sbjct: 491 AKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID 550

Query: 375 LL 376
            L
Sbjct: 551 SL 552



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 90/253 (35%), Positives = 137/253 (54%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            CKP+ +TYN +I  L K   +DKA   F  +   +  P   TY  LI GL       EA 
Sbjct: 854  CKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAM 913

Query: 72   RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            RLF EM D G +P+   FN++++   K G  + A +L   MV   +RP+  +Y+ L+D  
Sbjct: 914  RLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCL 973

Query: 132  CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            CL G+++ A   F  ++S G   D ++YN +ING  K++ +EEAL+LY EM ++GI P +
Sbjct: 974  CLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDL 1033

Query: 192  VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             TYN+L L L     VE A +++EE+Q   +  D  TYN  I G   +     A  +++ 
Sbjct: 1034 YTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKN 1093

Query: 252  LGILKCELDIQAY 264
            + +  C  +I  Y
Sbjct: 1094 MMVDGCNPNIGTY 1106



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 163/327 (49%), Gaps = 6/327 (1%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P   +YN +I  L +  + +KA  LF  MK     PD  T+N L+     +    E   L
Sbjct: 786  PTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFEL 845

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            + EM+ +  +P  +T+N+++  L K+  +D+A      +V  D RP   TY  L+DG   
Sbjct: 846  YKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAK 905

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             G++  A  LF  M   GCK +   +NILINGY K  + E A  L++ MV++GI+P + +
Sbjct: 906  VGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKS 965

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF---R 250
            Y  L   L    +V+ AL  F E++   +  D   YN  I+GL K+  + EA+ L+   R
Sbjct: 966  YTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMR 1025

Query: 251  TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
              GI+    D+  YN L+  L  +G +E A  ++  L    L  DV TYN +I G     
Sbjct: 1026 NRGIVP---DLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSE 1082

Query: 311  QMDKAHDLFLDMEENAVAPNVIIFVTL 337
              + A+ ++ +M  +   PN+  +  L
Sbjct: 1083 NPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 198/391 (50%), Gaps = 38/391 (9%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA- 70
            CKP+ +TYNT+I GL KE  V+ A   F Q+K ++++PD VT  +L+ GL       +A 
Sbjct: 643  CKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAI 701

Query: 71   --------------KRLFFEMMDQG--VQPSVVTFNVIMDELCKNGKMDEASRLLDLMV- 113
                           R F+E +  G  V+  +    +  +EL  NG   E S L+ L+  
Sbjct: 702  SIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRV 761

Query: 114  ----QRDVRP----NAFT-----YSTLMDGFCLTGKI------NRAEELFGSMESMGCKH 154
                +R++      + FT       TL    CL G++       +A +LF  M+++GC  
Sbjct: 762  LCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAP 821

Query: 155  DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
            D  ++N+L+  + K+ ++ E   LY+EM+S+  KP  +TYN +   L + + ++ AL  F
Sbjct: 822  DAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF 881

Query: 215  EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
             ++   D      TY   IDGL K G + EA+ LF  +    C+ +   +N LI+G  K 
Sbjct: 882  YDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKI 941

Query: 275  GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            G  E A +LF+ +    +  D+ +Y I++  LC  G++D+A   F +++   + P+ I +
Sbjct: 942  GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001

Query: 335  VTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
              +I+G  +  +  + + L ++M+ + ++PD
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEMRNRGIVPD 1032



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 156/311 (50%)

Query: 47   INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
            I+P + +YN LI  L   +   +A  LF +M + G  P   TFN+++    K+GK+ E  
Sbjct: 784  ISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELF 843

Query: 107  RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
             L   M+ R  +P+A TY+ ++     +  +++A + F  + S   +    +Y  LI+G 
Sbjct: 844  ELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGL 903

Query: 167  CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
             K   +EEA+ L+ EM   G KP    +N L  G  +I   E A +LF+ M  + +  D 
Sbjct: 904  AKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDL 963

Query: 227  STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
             +Y   +D LC  G + EA+  F  L     + D  AYN +I+GL KS R+E AL L+  
Sbjct: 964  KSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNE 1023

Query: 287  LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
            +  R +V D+ TYN ++  L   G +++A  ++ +++   + P+V  +  LI G+     
Sbjct: 1024 MRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSEN 1083

Query: 347  PSKVIELLHKM 357
            P     +   M
Sbjct: 1084 PEHAYTVYKNM 1094



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 172/359 (47%), Gaps = 6/359 (1%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY TI   L   G + +   +  +M+      +  +YN LIH L  +    EA  ++  M
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRM 218

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           + +G++PS+ T++ +M  L K    +    LL  M    +RPN +T++  +      GKI
Sbjct: 219 VSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKI 278

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A E+F  M+  GC  D V+Y +LI+  C   ++E A  L+ +M + G KP  V Y TL
Sbjct: 279 DEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITL 338

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF---RTLGI 254
                +   ++   + + +M+ D    D  T+   +D LCK     EA   F   R  GI
Sbjct: 339 LDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGI 398

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L    ++  YN LI GL ++GR+E AL+L  ++    +     TYNI I      G+  K
Sbjct: 399 LP---NLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGK 455

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A + F  M+   + PN++     ++    + +  +   + + ++E  + PD+   +M++
Sbjct: 456 AVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMM 514



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 192/403 (47%), Gaps = 44/403 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ +  N++ID L K G VD+A  +F +MK   ++P VVTYN+L+ GL       +A 
Sbjct: 538 CEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAI 597

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M+++   P+ ++FN ++D  CKN +++ A ++   M   D +P+  TY+T++ G 
Sbjct: 598 ELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGL 657

Query: 132 CLTGKINRAEELFGSM-ESMGCKH-----------------------DDVSYNI------ 161
               K+N A   F  + +SM   H                        D  Y +      
Sbjct: 658 IKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNR 717

Query: 162 -----LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI---HQVE-HALK 212
                L+ G     E+++A+    E+V  GI       ++  + L  +   H+ E +A +
Sbjct: 718 SFWEDLMGGTLVEAEMDKAIIFAEELVLNGI----CREDSFLIPLVRVLCKHKRELYAYQ 773

Query: 213 LFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           +F++  +   ++   ++YN  I  L +  Y  +A +LF+ +  + C  D   +N L+   
Sbjct: 774 IFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVH 833

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
            KSG++    EL++ +  R    D +TYNI+I  L     +DKA D F D+  +   P  
Sbjct: 834 GKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +  LI G  ++ +  + + L  +M +    P+ +I +++++
Sbjct: 894 RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILIN 936



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 145/278 (52%)

Query: 10   VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
            V C P+  T+N ++    K G + +   L+ +M      PD +TYN +I  L  +N+ ++
Sbjct: 817  VGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDK 876

Query: 70   AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
            A   F++++    +P+  T+  ++D L K G+++EA RL + M     +PN   ++ L++
Sbjct: 877  ALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILIN 936

Query: 130  GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            G+   G    A +LF  M + G + D  SY IL++  C    V+EAL  + E+ S G+ P
Sbjct: 937  GYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDP 996

Query: 190  TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
              + YN +  GL +  ++E AL L+ EM+   +  D  TYN+ +  L   G + +A  ++
Sbjct: 997  DFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMY 1056

Query: 250  RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
              L +   E D+  YN LI G   S   E A  +++++
Sbjct: 1057 EELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNM 1094



 Score =  140 bits (353), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 151/283 (53%), Gaps = 1/283 (0%)

Query: 57   LIHGLCHANDWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
            L+  LC       A ++F +   + G+ P++ ++N ++ EL +    ++A  L   M   
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 116  DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
               P+AFT++ L+     +GKI    EL+  M S  CK D ++YNI+I+   K+  +++A
Sbjct: 818  GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKA 877

Query: 176  LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
            L  + ++VS   +PT  TY  L  GL ++ ++E A++LFEEM       + + +N  I+G
Sbjct: 878  LDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILING 937

Query: 236  LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
              K G    A +LF+ +       D+++Y  L+D LC +GR++ AL  F  L    L  D
Sbjct: 938  YGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPD 997

Query: 296  VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
             + YN +I+GL    +M++A  L+ +M    + P++  + +L+
Sbjct: 998  FIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM 1040



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 151/322 (46%), Gaps = 35/322 (10%)

Query: 88  TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
           T N +++ L  + K+++ + + + M ++ +R +  TY T+     + G + +   +   M
Sbjct: 124 TCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKM 183

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
              G   +  SYN LI+   ++    EAL +YR MVS+G+KP++ TY+ L + L +    
Sbjct: 184 RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDS 243

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
           E  + L +EM+   +  +  T+   I  L + G I EA E+FR +    C  D+  Y  L
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVL 303

Query: 268 IDGLCKSGRLEIALELFRSL------PRRVL----------------------------- 292
           ID LC +G+LE A ELF  +      P +V+                             
Sbjct: 304 IDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY 363

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
           + DVVT+ I++  LC     D+A   F  M +  + PN+  + TLI G +R  +    ++
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423

Query: 353 LLHKMKEKKVMPDASIVSMVVD 374
           LL  M+   V P A   ++ +D
Sbjct: 424 LLGTMESVGVQPTAYTYNIFID 445



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 103/186 (55%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            CKPN   +N +I+G  K G  + A  LF +M  E I PD+ +Y  L+  LC A   +EA 
Sbjct: 924  CKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEAL 983

Query: 72   RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
              F E+   G+ P  + +N I++ L K+ +M+EA  L + M  R + P+ +TY++LM   
Sbjct: 984  YYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNL 1043

Query: 132  CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
             L G + +A+ ++  ++  G + D  +YN LI GY  ++  E A ++Y+ M+  G  P +
Sbjct: 1044 GLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNI 1103

Query: 192  VTYNTL 197
             TY  L
Sbjct: 1104 GTYAQL 1109



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 92/178 (51%), Gaps = 14/178 (7%)

Query: 1    MANGNGEIG---VVC-----------KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN 46
            + NG G+IG     C           +P+  +Y  ++D LC  G VD+A   F ++K   
Sbjct: 934  LINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTG 993

Query: 47   INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
            ++PD + YN +I+GL  +    EA  L+ EM ++G+ P + T+N +M  L   G +++A 
Sbjct: 994  LDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAK 1053

Query: 107  RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
            R+ + +    + P+ FTY+ L+ G+ L+     A  ++ +M   GC  +  +Y  L N
Sbjct: 1054 RMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 35/241 (14%)

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
           +VE+  +++  M  K I+  + TY T+F  L     +     +  +M++     +  +YN
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK----------------- 273
             I  L ++G+  EA+E++R +     +  ++ Y+ L+  L K                 
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 274 ------------------SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
                             +G+++ A E+FR +       D+VTY ++I  LCN GQ++ A
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
            +LF+ M+ N   P+ +I++TL+  F          E   +M+    MPD    +++VD+
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDV 376

Query: 376 L 376
           L
Sbjct: 377 L 377



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 4/192 (2%)

Query: 189 PTVV-TYNT--LFLGLFEIH-QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           PTV+ T  T    L    +H +VE    +FE MQ+  +  D  TY T    L   G + +
Sbjct: 116 PTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQ 175

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
              +   +      L+  +YN LI  L +SG    ALE++R +    L   + TY+ ++ 
Sbjct: 176 MTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMV 235

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            L      +    L  +ME+  + PNV  F   I    R  K  +  E+  +M ++   P
Sbjct: 236 ALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGP 295

Query: 365 DASIVSMVVDLL 376
           D    ++++D L
Sbjct: 296 DLVTYTVLIDAL 307


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 128/389 (32%), Positives = 200/389 (51%), Gaps = 41/389 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN +I+GLC EG +++A  L  +M+   + PDVV+YN+LI+G    +  +EA +L
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM ++GV+P+ VT N+++   CK GKMD+AS  +  M +    P+  TY+TL++G+C 
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430

Query: 134 TGKINRAEELFGSMESMGCKH--------------------------------------D 155
            G +  A   F +M+ MG K+                                      D
Sbjct: 431 AGNMGEA---FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFID 487

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
           +VSY  LI GY K+  V+ AL L+ EM  K I P+ VTYN +  GL +  + E A+    
Sbjct: 488 EVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLN 547

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
           E+    +  D +TYNT + G C+ G + +A +    +     + D+   N L+ GLC  G
Sbjct: 548 ELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEG 607

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
            LE AL+LF +   +    D VTYN +I  LC +G++D A +L  +MEE  + P+   + 
Sbjct: 608 MLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYN 667

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            +I       +  +  E + KM EK  +P
Sbjct: 668 AIITALTDSGRIREAEEFMSKMLEKGXLP 696



 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 197/367 (53%), Gaps = 2/367 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           ++G+V  PN  T+N +I G C E     A      M   N +PD VTYN+++  LC    
Sbjct: 201 KLGIV--PNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGR 258

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A+ L  +M  +G+ P+  T+N+++   CK G + EA+ +++LM Q ++ P+ +TY+ 
Sbjct: 259 LGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNM 318

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L++G C  G+I  A +L   ME++    D VSYN LING  +  ++ EA  L  EM  KG
Sbjct: 319 LINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKG 378

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +KP  VT+N +     +  +++ A     +M+    + D  TYNT I+G CK G + EA 
Sbjct: 379 VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAF 438

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
                +G    ++D    N ++  LC+  +LE A +L  S  +R    D V+Y  +I G 
Sbjct: 439 RTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGY 498

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             DG +D+A  L+ +M+E  + P+ + +  +I G  +  K  + I  L+++ E  ++PD 
Sbjct: 499 FKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDE 558

Query: 367 SIVSMVV 373
           +  + ++
Sbjct: 559 TTYNTIL 565



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 190/354 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYNTI+D LCK+G +  A+ L + MK   + P+  TYN L++G C      EA 
Sbjct: 239 CSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAA 298

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   M    + P V T+N++++ LC  G+++EA +L D M    + P+  +Y+TL++G 
Sbjct: 299 NVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGC 358

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               KI+ A +L   M   G K + V++NI++  YCK  ++++A +   +M   G  P  
Sbjct: 359 LEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDC 418

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  G  +   +  A +  +EM R ++  D+ T NT +  LC+   + EA +L  +
Sbjct: 419 VTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSS 478

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                  +D  +Y  LI G  K G ++ AL+L+  +  + ++   VTYN +I GLC  G+
Sbjct: 479 ARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGK 538

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            ++A     ++ E+ + P+   + T++HG+ R     K  +  +KM E    PD
Sbjct: 539 TEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPD 592



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/328 (33%), Positives = 168/328 (51%), Gaps = 2/328 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
            E GV  KPN VT+N ++   CKEG +D A     +M+    +PD VTYN+LI+G C A 
Sbjct: 375 SEKGV--KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
           +  EA R   EM  + ++   VT N I+  LC+  K++EA +LL    +R    +  +Y 
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYG 492

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+ G+   G ++RA +L+  M+        V+YN +I G C+  + E+A+S   E++  
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES 552

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G+ P   TYNT+  G      VE A +   +M  +    D  T N  + GLC  G + +A
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKA 612

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           ++LF T       +D   YN LI  LCK GRL+ A  L   +  + L  D  TYN +I  
Sbjct: 613 LKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITA 672

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVII 333
           L + G++ +A +    M E    P  ++
Sbjct: 673 LTDSGRIREAEEFMSKMLEKGXLPXQVL 700



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 167/332 (50%), Gaps = 3/332 (0%)

Query: 48  NPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS- 106
           +P     ++ I     +   + A ++F +M    ++P+++T N +++ L +       S 
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191

Query: 107 --RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
                +  ++  + PN  T++ ++ G+CL  K   A E    M    C  D+V+YN +++
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD 251

Query: 165 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAA 224
             CK   + +A  L  +M S+G+ P   TYN L  G  ++  ++ A  + E M ++++  
Sbjct: 252 ALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLP 311

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           D  TYN  I+GLC  G I EA +L   +  LK   D+ +YN LI+G  +  ++  A +L 
Sbjct: 312 DVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLL 371

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
             +  + +  + VT+NIM+   C +G+MD A +    MEE+  +P+ + + TLI+G+ + 
Sbjct: 372 EEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKA 431

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               +    + +M  K +  D+  ++ ++  L
Sbjct: 432 GNMGEAFRTMDEMGRKNMKMDSVTLNTILRTL 463



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 116/248 (46%), Gaps = 23/248 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVTYN II GLC+ G  ++A +   ++    + PD  TYN+++HG C   D  +A + 
Sbjct: 521 PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M++   +P V T N+++  LC  G +++A +L +  V +    +  TY+TL+   C 
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT--- 190
            G+++ A  L   ME      D  +YN +I     +  + EA     +M+ KG  P    
Sbjct: 641 EGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVL 700

Query: 191 --------------------VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
                                V Y+     L    + + A+++F E ++  +  D STY 
Sbjct: 701 QLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYI 760

Query: 231 TFIDGLCK 238
             +DGL K
Sbjct: 761 NLMDGLIK 768



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 23/182 (12%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  T N ++ GLC EG ++KA  LF     +    D VTYN+LI  LC     ++A  
Sbjct: 590 KPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFN 649

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF---------- 122
           L  EM ++ + P   T+N I+  L  +G++ EA   +  M+++   P             
Sbjct: 650 LLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVV 709

Query: 123 -------------TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
                         YS  +   C  GK   A  +FG  +  G   D  +Y  L++G  K 
Sbjct: 710 TSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKR 769

Query: 170 KE 171
           ++
Sbjct: 770 RK 771


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  217 bits (552), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 202/388 (52%), Gaps = 34/388 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V Y ++I G CKEG +  A  L+ +M G+ I+P+  T+ +LI GLCHAN   EA +
Sbjct: 457 KPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANK 516

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM++  V P+ VT+NV+++  CK G    A  LLD MV++ + P+ +TY  L+ G C
Sbjct: 517 LFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLC 576

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            TG+++ A E    ++    K +++ ++ L++GYCK   +++AL   REM+ +G+   +V
Sbjct: 577 STGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLV 636

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ L  G+         + L ++M    +  D   Y T ID   K G +  A  L+  +
Sbjct: 637 CYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIM 696

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFR------SLPRR---------------- 290
               C  ++  Y  LI+GLCK G ++ A  L R      SLP +                
Sbjct: 697 VSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNI 756

Query: 291 ------------VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
                         +A+ VTYNI+I G C  G++ +A ++ ++M ++ ++P+ I + T+I
Sbjct: 757 EKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTII 816

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDA 366
           + + R     + I+L   M  + V PD 
Sbjct: 817 YEYCRRGDLKEAIKLWESMLNRGVNPDT 844



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 195/433 (45%), Gaps = 70/433 (16%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +  TYN  I GLCK   V +A  +   +  + +  DV TY +L+ GLC   ++   +
Sbjct: 246 CDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGE 305

Query: 72  RLFFEMMD-----------------------------------QGVQPSVVTFNVIMDEL 96
            +  EM++                                    GV PS+  +N +++ +
Sbjct: 306 EMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSM 365

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN------------------ 138
           CK+GK+DEA  L + M  + + PN  TYS L+D FC  GK++                  
Sbjct: 366 CKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATV 425

Query: 139 -----------------RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 181
                             A+ LF  M + G K + V Y  LI+GYCK  E+  A  LY E
Sbjct: 426 YPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHE 485

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M  KGI P   T+  L  GL   +++  A KLF EM   +V  +  TYN  I+G CK G 
Sbjct: 486 MTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGN 545

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
            V A EL   +       D   Y  LI GLC +GR+  A E    L       + + ++ 
Sbjct: 546 TVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSA 605

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           ++HG C +G++D A D   +M    VA +++ +  LI+G +R      +I+LL +M ++ 
Sbjct: 606 LLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQG 665

Query: 362 VMPDASIVSMVVD 374
           + PD  + + ++D
Sbjct: 666 LRPDNVLYTTMID 678



 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 196/411 (47%), Gaps = 37/411 (9%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M N   E G V  P+    + ++DGL K+G +  A  L  ++K   + P +  YN+LI+ 
Sbjct: 307 MMNEMIEFGFV--PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINS 364

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           +C     +EA+ LF  M  +G+ P+ VT+++++D  CK GK+D A   L  M +  ++  
Sbjct: 365 MCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKAT 424

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
            + YS+L+ G C  GK+  A+ LF  M + G K + V Y  LI+GYCK  E+  A  LY 
Sbjct: 425 VYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYH 484

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           EM  KGI P   T+  L  GL   +++  A KLF EM   +V  +  TYN  I+G CK G
Sbjct: 485 EMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEG 544

Query: 241 YIVEAVEL---------------FRTLGILKCEL-----------DIQA---------YN 265
             V A EL               +R L    C             D+Q          ++
Sbjct: 545 NTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFS 604

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
            L+ G CK GRL+ AL+  R +  R +  D+V Y+++I+G+          DL   M + 
Sbjct: 605 ALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQ 664

Query: 326 AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            + P+ +++ T+I    +         L   M  +  +P+    + +++ L
Sbjct: 665 GLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGL 715



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 173/363 (47%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY+ +ID  CK G +D A     +M    I   V  Y+SLI G C       AK L
Sbjct: 388 PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSL 447

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+  G++P+VV +  ++   CK G++  A RL   M  + + PN +T++ L+ G C 
Sbjct: 448 FDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCH 507

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++  A +LFG M       ++V+YN+LI G+CK      A  L  EMV KG+ P   T
Sbjct: 508 ANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYT 567

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL    +V  A +   ++Q +    +   ++  + G CK G + +A++  R + 
Sbjct: 568 YRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREML 627

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                +D+  Y+ LI G+ +       ++L + +  + L  D V Y  MI      G + 
Sbjct: 628 GRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLK 687

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L+  M      PNV+ +  LI+G  +I    K   L  +M     +P+ +  +  +
Sbjct: 688 MAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFL 747

Query: 374 DLL 376
           D L
Sbjct: 748 DYL 750



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 172/361 (47%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   T + +++GL +      A  LF ++    + PDV  Y +++  LC   D+  A+ +
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   G   SV T+NV +  LCKN ++ EA  + +L+  + +R +  TY TL+ G C 
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +    EE+   M   G    + + + L++G  K   +  A  L  ++   G+ P++  
Sbjct: 298 VEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFV 357

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L   + +  +++ A  LF  M    +  +  TY+  ID  CK G +  A+     + 
Sbjct: 358 YNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMT 417

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  +  +  Y+ LI G CK G+L  A  LF  +    L  +VV Y  +I G C +G++ 
Sbjct: 418 EVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELH 477

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L+ +M    ++PN   F  LI G    N+ ++  +L  +M E  V+P+    ++++
Sbjct: 478 NAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLI 537

Query: 374 D 374
           +
Sbjct: 538 E 538



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 156/335 (46%), Gaps = 35/335 (10%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           MMD G+ P + T + +++ L +  +   A  L D +V   +RP+ + Y+ ++   C    
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
             RA E+ G MES GC     +YN+ I G CKN+ V EA+ +   +  KG++  V TY T
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 197 LFLGLFEIHQVEHALKLFEEM-----------------------------------QRDD 221
           L LGL ++ + E   ++  EM                                   ++  
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           VA     YN  I+ +CK+G + EA  LF  +G      +   Y+ LID  CK G+L++AL
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
                +    + A V  Y+ +I G C  G++  A  LF +M  N + PNV+I+ +LI G+
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +  +      L H+M  K + P+    + ++  L
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGL 505



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 151/295 (51%), Gaps = 1/295 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N + ++ ++ G CKEG +D A     +M G  +  D+V Y+ LI+G+    D      
Sbjct: 597 KLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIID 656

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M DQG++P  V +  ++D   K G +  A  L D+MV     PN  TY+ L++G C
Sbjct: 657 LLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLC 716

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +++AE L   M +     +  +Y   ++       +E+A+ L+ +++ +G     V
Sbjct: 717 KIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLH-DVLLEGFLANTV 775

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L  G  ++ +++ A ++   M    ++ D  +Y+T I   C+ G + EA++L+ ++
Sbjct: 776 TYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESM 835

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
                  D  AYN LI G C +G L  A EL   + RR +  +  TYN +IHG C
Sbjct: 836 LNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 108/189 (57%), Gaps = 1/189 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY  +I+GLCK G +DKA+ L  +M   N  P+  TY   +  L    +  +A 
Sbjct: 701 CLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAI 760

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  +++ +G   + VT+N+++   CK G++ EA+ +L  M+   + P+  +YST++  +
Sbjct: 761 QLH-DVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEY 819

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A +L+ SM + G   D V+YN LI G C   E+ +A  L  +M+ +G+KP  
Sbjct: 820 CRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNR 879

Query: 192 VTYNTLFLG 200
            TYN+L  G
Sbjct: 880 ATYNSLIHG 888



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 77/128 (60%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           NTVTYN +I G CK G + +A  + + M    I+PD ++Y+++I+  C   D  EA +L+
Sbjct: 773 NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLW 832

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M+++GV P  V +N ++   C  G++ +A  L D M++R V+PN  TY++L+ G CL 
Sbjct: 833 ESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLM 892

Query: 135 GKINRAEE 142
             ++   +
Sbjct: 893 SSVSSTAD 900



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 105/218 (48%)

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           + +++LI  Y +N+   + L + R M+  GI P + T + +  GL  I Q   AL LF+E
Sbjct: 146 LGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDE 205

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           +    +  D   Y   +  LC+    + A E+   +    C+L +  YN  I GLCK+ R
Sbjct: 206 IVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQR 265

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +  A+E+   L  + L ADV TY  ++ GLC   + +   ++  +M E    P+      
Sbjct: 266 VWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSN 325

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           L+ G  +        +L++K+K+  V P   + + +++
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALIN 363


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 206/383 (53%), Gaps = 20/383 (5%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +GV   P+  TY  +ID  CK G +++A+ LF +M+    +P VVTY +LIH    A   
Sbjct: 317 VGVT--PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 374

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV-------------- 113
            +A  +F  M+D G +P+ VT+  ++D LCK G + +A  +   ++              
Sbjct: 375 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC 434

Query: 114 --QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
             +  + PN  TY  L+DG C   K++ A EL  +M S GC+ + + Y+ LI+G+CK  +
Sbjct: 435 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           ++ A  ++ +M   G  P+V TY +L   +F+  +++ A+K+  +M +D    +  TY  
Sbjct: 495 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTA 554

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            IDGLC+ G   +A++L   +    C  ++  Y  LIDGL K+G+++++L+LF  + R+ 
Sbjct: 555 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
              + VTY ++I+ LC  G +DKA  L  +M++      +  +   I GF +    S  +
Sbjct: 615 CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIAS--L 672

Query: 352 ELLHKMKEKKVMPDASIVSMVVD 374
            +L +M+    +P A +  M++D
Sbjct: 673 GILEEMESYGTVPIAPVYGMLID 695



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 191/387 (49%), Gaps = 22/387 (5%)

Query: 12  CKPNTVTYNTIIDGLCKE------GFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           C P  V YN  I  +C +        +D A+ ++ +M   N   + V   +    LC   
Sbjct: 208 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 267

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            +++A +L  EMM +G  P   T++ ++  LC   K+++A  L   M    V P+ +TY+
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+D FC  G I +A+ LF  M S+GC    V+Y  LI+ Y K K+V +A  ++  MV  
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM----------------QRDDVAADTSTY 229
           G +P  VTY  L  GL +   +  A +++ ++                 R  +A +  TY
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
              +DGLCK   +  A EL   +    CE +   Y+ LIDG CK+G+++ A E+F  + +
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
              +  V TY  +I  +  DG++D A  +   M +++  PNV+ +  +I G  RI +  K
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567

Query: 350 VIELLHKMKEKKVMPDASIVSMVVDLL 376
            ++LL  M+EK   P+    + ++D L
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGL 594



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 114/349 (32%), Positives = 176/349 (50%), Gaps = 14/349 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  ++DGLCK   VD A  L   M      P+ + Y++LI G C A   + A+ +
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M   G  PSV T+  ++D + K+G++D A ++L  M++    PN  TY+ ++DG C 
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+  +A +L   ME  GC  + V+Y  LI+G  K  +++ +L L+ +M  KG  P  VT
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY----IVEAVELF 249
           Y  L   L     ++ A  L  EM++         Y   I G  K+      I+E +E +
Sbjct: 622 YRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESY 681

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL---PRRVLVADVVTYNIMIHGL 306
            T+ I         Y  LID   K+GRLEIA+EL + +   P  V   D   Y  +I  L
Sbjct: 682 GTVPI------APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKT-DNDMYASLIQAL 734

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           C   Q+++A  L+ +M      P + +FV LI G V + K  + ++L +
Sbjct: 735 CLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCY 783



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 178/419 (42%), Gaps = 57/419 (13%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +TV    +I GL +  + D+A +   +M+  +  P+VVTY +L+ G          KR
Sbjct: 104 KLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKR 163

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   MM +G  P+   FN ++   C       A +LL+ M      P    Y+  +   C
Sbjct: 164 IINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSIC 223

Query: 133 LTGK------INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
              K      ++ AE+++G M +  C  + V+        C   + ++A  L +EM+ KG
Sbjct: 224 GQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKG 283

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
             P   TY+ +   L    +VE A  LF+EM+   V  D  TY   ID  CK G I +A 
Sbjct: 284 FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQ 343

Query: 247 ELF---RTLGI--------------LKCELDIQA------------------YNCLIDGL 271
            LF   R++G               LK +   QA                  Y  L+DGL
Sbjct: 344 WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGL 403

Query: 272 CKSGRLEIALELFRSL----------------PRRVLVADVVTYNIMIHGLCNDGQMDKA 315
           CK+G +  A E++  L                 R  L  +VVTY  ++ GLC   ++D A
Sbjct: 404 CKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHA 463

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           H+L   M  +   PN I++  LI GF +  K     E+  +M +   +P     + ++D
Sbjct: 464 HELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLID 522



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 152/309 (49%), Gaps = 4/309 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN + Y+ +IDG CK G +D A+ +FLQM      P V TY SLI  +      + A 
Sbjct: 475 CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 534

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++  +M+     P+VVT+  ++D LC+ G+ ++A +LL LM ++   PN  TY+ L+DG 
Sbjct: 535 KVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 594

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GKI+ + +LF  M   GC  + V+Y +LIN  C    +++A  L  EM        +
Sbjct: 595 GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYL 654

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y     G  +      +L + EEM+          Y   ID   K G +  A+EL + 
Sbjct: 655 QGYRCAIQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKE 712

Query: 252 LGILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           +  +   +  D   Y  LI  LC + ++E A  L+  + RR  V ++  +  +I GL   
Sbjct: 713 MMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEV 772

Query: 310 GQMDKAHDL 318
            + D+A  L
Sbjct: 773 KKWDEALQL 781



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/390 (24%), Positives = 146/390 (37%), Gaps = 75/390 (19%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           +K     P  VTYN+L+  L  A   +   R+  EM + G      T       LCK G+
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 102 --------------------------------MDEASRLLDLMVQRDVRPNAFTYSTLMD 129
                                            DEA   L  M      PN  TY TL+ 
Sbjct: 91  WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GF    ++   + +   M + GC  +   +N L++ YC  K+   A  L   M + G  P
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210

Query: 190 TVVTYNTLFLG------------------------------------------LFEIHQV 207
             V YN +F+G                                          L  + + 
Sbjct: 211 GYVVYN-IFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 269

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
           + A +L +EM R     DTSTY+  I  LC    + +A  LF+ + ++    D+  Y  L
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           ID  CK+G +E A  LF  +        VVTY  +IH      Q+ +A+D+F  M +   
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 389

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            PN + +  L+ G  +    SK  E+  K+
Sbjct: 390 RPNDVTYGALVDGLCKAGNISKAFEVYAKL 419



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 37/76 (48%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+    K +   Y ++I  LC    V++A  L+ +M      P++  +  LI GL     
Sbjct: 715 EVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKK 774

Query: 67  WNEAKRLFFEMMDQGV 82
           W+EA +L + +  +GV
Sbjct: 775 WDEALQLCYGICHEGV 790


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 122/364 (33%), Positives = 193/364 (53%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYNT+I+ L K G +D+AK +  QM      PD  T+N+LI  L   N   EA  L
Sbjct: 335 PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDL 394

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             E+  +G+ P V TFN++++ LCK G      RL + M      P+  TY+ L+D  C 
Sbjct: 395 ARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCS 454

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A +L   MES GC    V+YN +I+  CK   +EEA  ++ +M ++GI  + VT
Sbjct: 455 MGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVT 514

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +NTL  GL +  +++ A +L E+M ++ +  +  TYN+ +   CK G I +A ++  T+ 
Sbjct: 515 FNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMT 574

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E+D+  Y  LI+GLCK+GR ++AL+L R +  + +      YN +I  L     + 
Sbjct: 575 ANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLR 634

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK-VIELLHKMKEKKVMPDASIVSMV 372
            A +LF +M E    P+ + +  +     R   P K   + L +M  K  MP+ S   M+
Sbjct: 635 DALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRML 694

Query: 373 VDLL 376
            + L
Sbjct: 695 AEGL 698



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 187/365 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  VT N +I+G CK G V+ A     Q   +   PD VTYN+ +HGLC     + A 
Sbjct: 263 CSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHAL 322

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++   M+ +G  P V T+N +++ L KNG++DEA  +++ MV R   P+  T++TL+   
Sbjct: 323 KVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 382

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               ++  A +L   +   G   D  ++NILIN  CK  +    + L+ EM S G  P  
Sbjct: 383 SSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDE 442

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN L   L  + ++ +AL L  EM+ +     T TYNT ID LCK   I EA E+F  
Sbjct: 443 VTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQ 502

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +           +N LIDGLCK+ R++ A EL   + +  L  + +TYN ++   C  G 
Sbjct: 503 MDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGN 562

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + KA D+   M  N    +V+ + TLI+G  +  +    ++LL  M+ K + P     + 
Sbjct: 563 IKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNP 622

Query: 372 VVDLL 376
           V+  L
Sbjct: 623 VIQSL 627



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 186/366 (50%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           EI    +P+ VTYNT + GLC+ G V  A  +   M  E  +PDV TYN++I+ L    +
Sbjct: 293 EIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGE 352

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            +EAK +  +M+D+G  P   TFN ++  L    +++EA  L   +  + + P+ +T++ 
Sbjct: 353 LDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNI 412

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L++  C  G  +    LF  M+S GC  D+V+YNILI+  C   ++  AL L  EM S G
Sbjct: 413 LINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNG 472

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
              + VTYNT+   L +  ++E A ++F++M    ++    T+NT IDGLCK   I +A 
Sbjct: 473 CPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDAT 532

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           EL   +     + +   YN ++   CK G ++ A ++  ++       DVVTY  +I+GL
Sbjct: 533 ELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGL 592

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C  G+   A  L   M    + P    +  +I    R N     + L  +M E    PDA
Sbjct: 593 CKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDA 652

Query: 367 SIVSMV 372
               +V
Sbjct: 653 LTYKIV 658



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 179/350 (51%), Gaps = 1/350 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+T T+NT+I  L  +  +++A  L  ++  + ++PDV T+N LI+ LC   D +   
Sbjct: 368 CLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGI 427

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RLF EM   G  P  VT+N+++D LC  GK+  A  LL+ M       +  TY+T++D  
Sbjct: 428 RLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDAL 487

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +I  AEE+F  M++ G     V++N LI+G CK K +++A  L  +MV +G++P  
Sbjct: 488 CKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNN 547

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYN++     +   ++ A  + E M  +    D  TY T I+GLCK G    A++L R 
Sbjct: 548 ITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRG 607

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN-DG 310
           + I       +AYN +I  L +   L  AL LFR +       D +TY I+   LC   G
Sbjct: 608 MRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGG 667

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            + +A D  ++M      P    F  L  G + +     +I  +  + EK
Sbjct: 668 PIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEK 717



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 175/344 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+ T++ G  +EG ++ A  +  +M     +P  VT N LI+G C      +A   
Sbjct: 230 PDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGY 289

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             + +  G +P  VT+N  +  LC+NG +  A +++DLM+Q    P+ FTY+T+++    
Sbjct: 290 IQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSK 349

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A+ +   M   GC  D  ++N LI        +EEAL L RE+  KG+ P V T
Sbjct: 350 NGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYT 409

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L   L ++      ++LFEEM+      D  TYN  ID LC  G +  A++L   + 
Sbjct: 410 FNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEME 469

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C      YN +ID LCK  R+E A E+F  +  + +    VT+N +I GLC   ++D
Sbjct: 470 SNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRID 529

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            A +L   M +  + PN I + +++  + +     K  ++L  M
Sbjct: 530 DATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETM 573



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 181/361 (50%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N   G   +P+ VT NT+I  LC+   V  A  +  +M    + PD  T+ +L+ G    
Sbjct: 186 NEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEE 245

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
                A R+  +MM+ G  P+ VT NV+++  CK G++++A   +   +     P+  TY
Sbjct: 246 GSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTY 305

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           +T + G C  G ++ A ++   M   G   D  +YN +IN   KN E++EA  +  +MV 
Sbjct: 306 NTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVD 365

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           +G  P   T+NTL + L   +++E AL L  E+    ++ D  T+N  I+ LCK G    
Sbjct: 366 RGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHL 425

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
            + LF  +    C  D   YN LID LC  G+L  AL+L   +         VTYN +I 
Sbjct: 426 GIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIID 485

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            LC   ++++A ++F  M+   ++ + + F TLI G  +  +     EL+ +M ++ + P
Sbjct: 486 ALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQP 545

Query: 365 D 365
           +
Sbjct: 546 N 546



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 168/330 (50%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           +  D V +N L++ L   +     + ++ EM  +G+QP VVT N ++  LC+  ++  A 
Sbjct: 158 VQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAV 217

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
            +L+ M    V P+  T++TLM GF   G I  A  +   M   GC    V+ N+LINGY
Sbjct: 218 LMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGY 277

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           CK   VE+AL   ++ ++ G +P  VTYNT   GL +   V HALK+ + M ++    D 
Sbjct: 278 CKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDV 337

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            TYNT I+ L KNG + EA  +   +    C  D   +N LI  L    RLE AL+L R 
Sbjct: 338 FTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARE 397

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           L  + L  DV T+NI+I+ LC  G       LF +M+ +   P+ + +  LI     + K
Sbjct: 398 LTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGK 457

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               ++LL++M+           + ++D L
Sbjct: 458 LGNALDLLNEMESNGCPRSTVTYNTIIDAL 487



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 188/375 (50%), Gaps = 8/375 (2%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N   GV  + +TV +N +++ L +   +   ++++ +M G  I PDVVT N+LI  LC A
Sbjct: 153 NDTFGV--QADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRA 210

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
           +    A  +  EM   GV P   TF  +M    + G ++ A R+   M++    P   T 
Sbjct: 211 HQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTV 270

Query: 125 STLMDGFCLTGKINRAEELFGSME---SMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 181
           + L++G+C   K+ R E+  G ++   + G + D V+YN  ++G C+N  V  AL +   
Sbjct: 271 NVLINGYC---KMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDL 327

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M+ +G  P V TYNT+   L +  +++ A  +  +M       DT+T+NT I  L     
Sbjct: 328 MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNR 387

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           + EA++L R L +     D+  +N LI+ LCK G   + + LF  +       D VTYNI
Sbjct: 388 LEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNI 447

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +I  LC+ G++  A DL  +ME N    + + + T+I    +  +  +  E+  +M  + 
Sbjct: 448 LIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQG 507

Query: 362 VMPDASIVSMVVDLL 376
           +   A   + ++D L
Sbjct: 508 ISRSAVTFNTLIDGL 522


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 118/358 (32%), Positives = 198/358 (55%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           + + +I+  C    VD   ++  ++    + P +VT+ +L++GLC     ++   L+ +M
Sbjct: 99  SLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDM 158

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           + +G+QP+V T+NVI++ L K+GK +EA   L  M +    PN   YSTL+DG+CL G++
Sbjct: 159 LVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQM 218

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  +F  M S GC  +  +Y  L+NGYCK + +EEA+ L  E + KG+ P +VT+ T+
Sbjct: 219 DEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTI 278

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL    +   A +LF  +       +  TY   +DGLCK+G + EA  LF+ +     
Sbjct: 279 ISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTV 338

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           + ++  Y  LID LCK G+++   ELF  L    L  +V TY  ++  LC +G + +AH 
Sbjct: 339 KPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHK 398

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
           LF  MEE+   P+   +  +I GF++   PS   +L+ +M  +    DA+  +++ D 
Sbjct: 399 LFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALLNDF 456



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 193/361 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  V ++ +   + + G  +    L  +++   I  D+ + + LI+  CH +  +    +
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G++PS+VTF  +++ LC  GKMD+   L D M+ R ++PN +TY+ +++    
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +GK N A      ME +GC  + V+Y+ LI+GYC   +++EA S++  MVSKG  P V T
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYT 239

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +L  G  +I ++E A++L +E  R  +  D  T+ T I GLC+ G  + A +LFR + 
Sbjct: 240 YTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYIC 299

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +I  Y  L+DGLCK G LE A  LF+ + R  +  ++V Y I+I  LC  G++ 
Sbjct: 300 AHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIK 359

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
              +LF  + +  + PNV  +  L+    +     +  +L  KM+E    PD    ++++
Sbjct: 360 DGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVII 419

Query: 374 D 374
            
Sbjct: 420 Q 420



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 159/310 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT+ T+++GLC EG +D+   L+  M    + P+V TYN +I+ L  +   NEA  
Sbjct: 129 EPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALG 188

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +M   G  P+VV ++ ++D  C  G+MDEA  + DLMV +   PN +TY++LM+G+C
Sbjct: 189 FLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYC 248

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +I  A +L       G   D V++  +I+G C+      A  L+R + + G  P ++
Sbjct: 249 KIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIM 308

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L  GL +   +E A  LF+EMQR  V  +   Y   ID LCK G I +  ELF  L
Sbjct: 309 TYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRL 368

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + ++  Y  L+  LCK G +  A +LFR +       D   YN++I G       
Sbjct: 369 IDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDP 428

Query: 313 DKAHDLFLDM 322
             A  L  +M
Sbjct: 429 SMARQLVEEM 438



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 159/290 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TYN II+ L K G  ++A     QM+     P+VV Y++LI G C     +EA+ 
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  M+ +G  P+V T+  +M+  CK  +++EA +LLD  +++ + P+  T++T++ G C
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLC 283

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+   A++LF  + + G   + ++Y +L++G CK+  +EEA +L++EM    +KP +V
Sbjct: 284 RAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLV 343

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y  L   L +  +++   +LF  +  + +  +  TY   +  LCK G I+EA +LFR +
Sbjct: 344 IYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKM 403

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
               C  D  AYN +I G  +     +A +L   +  R   AD  T  ++
Sbjct: 404 EEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/230 (34%), Positives = 121/230 (52%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           V C PN V Y+T+IDG C  G +D+A+++F  M  +   P+V TY SL++G C      E
Sbjct: 196 VGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEE 255

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A +L  E + +G+ P +VTF  I+  LC+ G+   A +L   +      PN  TY  L+D
Sbjct: 256 AVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLD 315

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C  G +  A  LF  M+    K + V Y ILI+  CK  ++++   L+  ++ +G+KP
Sbjct: 316 GLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKP 375

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            V TY  L   L +   +  A KLF +M+ D    D   YN  I G  ++
Sbjct: 376 NVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQH 425



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 115/217 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TY ++++G CK   +++A  L  +   + + PD+VT+ ++I GLC A     A+
Sbjct: 233 CTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQ 292

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +LF  +   G  P+++T+ V++D LCK+G ++EA  L   M +  V+PN   Y+ L+D  
Sbjct: 293 QLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSL 352

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GKI   +ELF  +   G K +  +Y  L+   CK   + EA  L+R+M   G  P  
Sbjct: 353 CKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDK 412

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             YN +  G  +      A +L EEM     +AD +T
Sbjct: 413 CAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 152/312 (48%)

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
            D ++A   F  M+ +   P +V F+ +   + + G  +    L   +    +  +  + 
Sbjct: 41  KDKDDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSL 100

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           S L++ FC   +++    +   +  +G +   V++  L+NG C   ++++ + LY +M+ 
Sbjct: 101 SILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLV 160

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           +G++P V TYN +   L +  +   AL   ++M++     +   Y+T IDG C  G + E
Sbjct: 161 RGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDE 220

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A  +F  +    C  ++  Y  L++G CK  R+E A++L     R+ LV D+VT+  +I 
Sbjct: 221 ARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIIS 280

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           GLC  G+   A  LF  +  +   PN++ +  L+ G  +     +   L  +M+   V P
Sbjct: 281 GLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKP 340

Query: 365 DASIVSMVVDLL 376
           +  I ++++D L
Sbjct: 341 NLVIYTILIDSL 352


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 186/360 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ ++Y+T+++G C+ G +DK   L   MK + + P+   Y S+I  LC      EA+  
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+ QG+ P  V +  ++D  CK G +  AS+    M  RD+ P+  TY+ ++ GFC 
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A +LF  M   G + D V++  LINGYCK   +++A  ++  M+  G  P VVT
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  GL +   ++ A +L  EM +  +  +  TYN+ ++GLCK+G I EAV+L     
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D   Y  L+D  CKSG ++ A E+ + +  + L   +VT+N++++G C  G ++
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
               L   M    +APN   F +L+  +   N       +   M  + V PD      +V
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 186/361 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TV Y T+IDG CK G +  A   F +M   +I PDV+TY ++I G C   D  EA +L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM  +G++P  VTF  +++  CK G M +A R+ + M+Q    PN  TY+TL+DG C 
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A EL   M  +G + +  +YN ++NG CK+  +EEA+ L  E  + G+    VT
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL     +  +++ A ++ +EM    +     T+N  ++G C +G + +  +L   + 
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +   +N L+   C    L+ A  +++ +  R +  D  TY  ++ G C    M 
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  LF +M+    + +V  +  LI GF++  K  +  E+  +M+ + +  D  I     
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFS 708

Query: 374 D 374
           D
Sbjct: 709 D 709



 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 198/367 (53%), Gaps = 2/367 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+GV    N  +YN +I  +C+ G + +A  L L M+ +   PDV++Y+++++G C   +
Sbjct: 239 EVGVCW--NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            ++  +L   M  +G++P+   +  I+  LC+  K+ EA      M+++ + P+   Y+T
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+DGFC  G I  A + F  M S     D ++Y  +I+G+C+  ++ EA  L+ EM  KG
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           ++P  VT+  L  G  +   ++ A ++   M +   + +  TY T IDGLCK G +  A 
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           EL   +  +  + +I  YN +++GLCKSG +E A++L        L AD VTY  ++   
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C  G+MDKA ++  +M    + P ++ F  L++GF          +LL+ M  K + P+A
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596

Query: 367 SIVSMVV 373
           +  + +V
Sbjct: 597 TTFNSLV 603



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 182/361 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN+  Y +II  LC+   + +A+  F +M  + I PD V Y +LI G C   D   A +
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F+EM  + + P V+T+  I+   C+ G M EA +L   M  + + P++ T++ L++G+C
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  +   M   GC  + V+Y  LI+G CK  +++ A  L  EM   G++P + 
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN++  GL +   +E A+KL  E +   + ADT TY T +D  CK+G + +A E+ + +
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +  I  +N L++G C  G LE   +L   +  + +  +  T+N ++   C    +
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A  ++ DM    V P+   +  L+ G  +     +   L  +MK K      S  S++
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672

Query: 373 V 373
           +
Sbjct: 673 I 673



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 138/245 (56%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N  I   C PN VTY T+IDGLCKEG +D A  L  +M    + P++ TYNS+++GLC +
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
            +  EA +L  E    G+    VT+  +MD  CK+G+MD+A  +L  M+ + ++P   T+
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + LM+GFCL G +   E+L   M + G   +  ++N L+  YC    ++ A ++Y++M S
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           +G+ P   TY  L  G  +   ++ A  LF+EM+    +   STY+  I G  K    +E
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684

Query: 245 AVELF 249
           A E+F
Sbjct: 685 AREVF 689



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 155/283 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P++VT+  +I+G CK G +  A  +   M     +P+VVTY +LI GLC   D + A  
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM   G+QP++ T+N I++ LCK+G ++EA +L+       +  +  TY+TLMD +C
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G++++A+E+   M   G +   V++N+L+NG+C +  +E+   L   M++KGI P   
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N+L       + ++ A  ++++M    V  D  TY   + G CK   + EA  LF+ +
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
                 + +  Y+ LI G  K  +   A E+F  + R  L AD
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 138/222 (62%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TYN+I++GLCK G +++A  L  + +   +N D VTY +L+   C + + ++A+ 
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM+ +G+QP++VTFNV+M+  C +G +++  +LL+ M+ + + PNA T+++L+  +C
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +   +  A  ++  M S G   D  +Y  L+ G+CK + ++EA  L++EM  KG   +V 
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           TY+ L  G  +  +   A ++F++M+R+ +AAD   ++ F D
Sbjct: 668 TYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 160/302 (52%)

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F E  + GV  +V ++N+++  +C+ G++ EA  LL LM  +   P+  +YST+++G+C
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++++  +L   M+  G K +   Y  +I   C+  ++ EA   + EM+ +GI P  V
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y TL  G  +   +  A K F EM   D+  D  TY   I G C+ G +VEA +LF  +
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                E D   +  LI+G CK+G ++ A  +   + +     +VVTY  +I GLC +G +
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A++L  +M +  + PN+  + ++++G  +     + ++L+ + +   +  D    + +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532

Query: 373 VD 374
           +D
Sbjct: 533 MD 534



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 112/241 (46%), Gaps = 1/241 (0%)

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKN-KEVEEALSLYREMVSKGIKPTVVT 193
           G +  A  +F  M + G      S N+ +    K+  +   A+ ++RE    G+   V +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +   + ++ +++ A  L   M+      D  +Y+T ++G C+ G + +  +L   + 
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + +   Y  +I  LC+  +L  A E F  + R+ ++ D V Y  +I G C  G + 
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A   F +M    + P+V+ +  +I GF +I    +  +L H+M  K + PD+   + ++
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428

Query: 374 D 374
           +
Sbjct: 429 N 429



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 1/157 (0%)

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG-RLEI 279
           D  +D   ++ F   L   G + EA  +F  +      L + + N  +  L K   +   
Sbjct: 170 DWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 229

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A+ +FR  P   +  +V +YNI+IH +C  G++ +AH L L ME     P+VI + T+++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           G+ R  +  KV +L+  MK K + P++ I   ++ LL
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLL 326



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G   +P  VT+N +++G C  G ++  + L   M  + I P+  T+NSL+   C  N+ 
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A  ++ +M  +GV P   T+  ++   CK   M EA  L   M  +    +  TYS L
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           + GF    K   A E+F  M   G   D   ++   +   K K 
Sbjct: 673 IKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 716



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 94/190 (49%), Gaps = 3/190 (1%)

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY-IVE 244
           G  P V  ++  F  L +   +  A ++FE+M    +     + N ++  L K+ Y    
Sbjct: 172 GSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 229

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A+ +FR    +    ++ +YN +I  +C+ GR++ A  L   +  +    DV++Y+ +++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G C  G++DK   L   M+   + PN  I+ ++I    RI K ++  E   +M  + ++P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349

Query: 365 DASIVSMVVD 374
           D  + + ++D
Sbjct: 350 DTVVYTTLID 359



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 49/101 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY  ++ G CK   + +A  LF +MKG+  +  V TY+ LI G      + EA+ +
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
           F +M  +G+      F+   D   K  + D     +D +++
Sbjct: 689 FDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 203/377 (53%), Gaps = 18/377 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY  +ID  CK G +++A+ LF +M+    +P VVTY +LIH    A    +A  +
Sbjct: 256 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 315

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV----------------QRDV 117
           F  M+D G +P+ VT+  ++D LCK G + +A  +   ++                +  +
Sbjct: 316 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 375

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
            PN  TY  L+DG C   K++ A EL  +M S GC+ + + Y+ LI+G+CK  +++ A  
Sbjct: 376 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 435

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           ++ +M   G  P+V TY +L   +F+  +++ A+K+  +M +D    +  TY   IDGLC
Sbjct: 436 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 495

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           + G   +A++L   +    C  ++  Y  LIDGL K+G+++++L+LF  + R+    + V
Sbjct: 496 RIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYV 555

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           TY ++I+ LC  G +DKA  L  +M++      +  +   I GF +    S  + +L +M
Sbjct: 556 TYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIAS--LGILEEM 613

Query: 358 KEKKVMPDASIVSMVVD 374
           +    +P A +  M++D
Sbjct: 614 ESYGTVPIAPVYGMLID 630



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 191/387 (49%), Gaps = 22/387 (5%)

Query: 12  CKPNTVTYNTIIDGLCKE------GFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           C P  V YN  I  +C +        +D A+ ++ +M   N   + V   +    LC   
Sbjct: 143 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 202

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            +++A +L  EMM +G  P   T++ ++  LC   K+++A  L   M    V P+ +TY+
Sbjct: 203 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 262

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+D FC  G I +A+ LF  M S+GC    V+Y  LI+ Y K K+V +A  ++  MV  
Sbjct: 263 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 322

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM----------------QRDDVAADTSTY 229
           G +P  VTY  L  GL +   +  A +++ ++                 R  +A +  TY
Sbjct: 323 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 382

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
              +DGLCK   +  A EL   +    CE +   Y+ LIDG CK+G+++ A E+F  + +
Sbjct: 383 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 442

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
              +  V TY  +I  +  DG++D A  +   M +++  PNV+ +  +I G  RI +  K
Sbjct: 443 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 502

Query: 350 VIELLHKMKEKKVMPDASIVSMVVDLL 376
            ++LL  M+EK   P+    + ++D L
Sbjct: 503 ALKLLSLMEEKGCSPNVVTYTALIDGL 529



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 114/349 (32%), Positives = 176/349 (50%), Gaps = 14/349 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  ++DGLCK   VD A  L   M      P+ + Y++LI G C A   + A+ +
Sbjct: 377 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 436

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M   G  PSV T+  ++D + K+G++D A ++L  M++    PN  TY+ ++DG C 
Sbjct: 437 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 496

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+  +A +L   ME  GC  + V+Y  LI+G  K  +++ +L L+ +M  KG  P  VT
Sbjct: 497 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 556

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY----IVEAVELF 249
           Y  L   L     ++ A  L  EM++         Y   I G  K+      I+E +E +
Sbjct: 557 YRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESY 616

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL---PRRVLVADVVTYNIMIHGL 306
            T+ I         Y  LID   K+GRLEIA+EL + +   P  V   D   Y  +I  L
Sbjct: 617 GTVPI------APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSV-KTDNDMYASLIQAL 669

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           C   Q+++A  L+ +M      P + +FV LI G V + K  + ++L +
Sbjct: 670 CLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCY 718



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 178/419 (42%), Gaps = 57/419 (13%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +TV    +I GL +  + D+A +   +M+  +  P+VVTY +L+ G          KR
Sbjct: 39  KLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKR 98

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   MM +G  P+   FN ++   C       A +LL+ M      P    Y+  +   C
Sbjct: 99  IINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSIC 158

Query: 133 LTGK------INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
              K      ++ AE+++G M +  C  + V+        C   + ++A  L +EM+ KG
Sbjct: 159 GQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKG 218

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
             P   TY+ +   L    +VE A  LF+EM+   V  D  TY   ID  CK G I +A 
Sbjct: 219 FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQ 278

Query: 247 ELF---RTLGI--------------LKCELDIQA------------------YNCLIDGL 271
            LF   R++G               LK +   QA                  Y  L+DGL
Sbjct: 279 WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGL 338

Query: 272 CKSGRLEIALELFRSL----------------PRRVLVADVVTYNIMIHGLCNDGQMDKA 315
           CK+G +  A E++  L                 R  L  +VVTY  ++ GLC   ++D A
Sbjct: 339 CKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHA 398

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           H+L   M  +   PN I++  LI GF +  K     E+  +M +   +P     + ++D
Sbjct: 399 HELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLID 457



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 152/309 (49%), Gaps = 4/309 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN + Y+ +IDG CK G +D A+ +FLQM      P V TY SLI  +      + A 
Sbjct: 410 CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 469

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++  +M+     P+VVT+  ++D LC+ G+ ++A +LL LM ++   PN  TY+ L+DG 
Sbjct: 470 KVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 529

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GKI+ + +LF  M   GC  + V+Y +LIN  C    +++A  L  EM        +
Sbjct: 530 GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYL 589

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y     G  +      +L + EEM+          Y   ID   K G +  A+EL + 
Sbjct: 590 QGYRCAIQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKE 647

Query: 252 LGILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           +  +   +  D   Y  LI  LC + ++E A  L+  + RR  V ++  +  +I GL   
Sbjct: 648 MMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEV 707

Query: 310 GQMDKAHDL 318
            + D+A  L
Sbjct: 708 KKWDEALQL 716



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 3/109 (2%)

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
            C    LCK GR   AL++   + R     D V    MI GL      D+A      M  
Sbjct: 14  GCFAHALCKEGRWADALDM---IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRC 70

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           N+  PNV+ + TL+ GF++  +      +++ M  +   P+ S+ + +V
Sbjct: 71  NSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLV 119



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 60/157 (38%), Gaps = 3/157 (1%)

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M       D  T   F   LCK G   +A+++         +LD      +I GL ++  
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDF---KLDTVLCTHMISGLMEASY 57

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
            + A+     +     + +VVTY  ++ G     Q+     +   M      PN  +F +
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           L+H +      +   +LL++M      P   + ++ +
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFI 154



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 37/76 (48%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+    K +   Y ++I  LC    V++A  L+ +M      P++  +  LI GL     
Sbjct: 650 EVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKK 709

Query: 67  WNEAKRLFFEMMDQGV 82
           W+EA +L + +  +GV
Sbjct: 710 WDEALQLCYGICHEGV 725


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 103/238 (43%), Positives = 148/238 (62%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y T+IDGLCK G +D A   F QM  + + P+VV Y SLIH LC  + W +A+ L
Sbjct: 215 PNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEEL 274

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            FE++DQG+ P++V FN I+D LCK G++ E+ +L DL+    V P+  TYSTL+DG+CL
Sbjct: 275 IFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCL 334

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A +L   M S+G K D V+Y+ LINGYCK   +E+AL+L++EM S G+ P ++T
Sbjct: 335 AGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIIT 394

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           YN +  GLF   +   A +L+  +       + STYN  +    K   ++     FRT
Sbjct: 395 YNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSLMMHFGCFRT 452



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 197/364 (54%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           V+  PN  TYN+I+ G C  G  +KA  +F +M  + I PDVVTYNSL+  LC      E
Sbjct: 71  VMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTE 130

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+++F  M+ +G++P + T+  ++      G + E   LL LMVQ  ++ +   ++ L+ 
Sbjct: 131 ARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILIC 190

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            +    K++    +F  M   G   + V+Y  +I+G CK   +++A+  + +M+ KG+ P
Sbjct: 191 AYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTP 250

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VV Y +L   L    + E A +L  E+    +  +   +NT +D LCK G ++E+ +LF
Sbjct: 251 NVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLF 310

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             LG +    D+  Y+ LIDG C +G+++ A++L   +    L  D VTY+ +I+G C  
Sbjct: 311 DLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKI 370

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            +M+ A  LF +ME N V P++I +  ++HG  R  + +   EL  ++ E     + S  
Sbjct: 371 NRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTY 430

Query: 370 SMVV 373
           ++++
Sbjct: 431 NIIL 434



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 197/436 (45%), Gaps = 101/436 (23%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLI------------- 58
           C P+ V+YNTIIDGL KEG VDKA   + +M    ++PD VTYNS+I             
Sbjct: 7   CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66

Query: 59  ------------------HGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
                             HG C +    +A  +F +M   G++P VVT+N +MD LCKNG
Sbjct: 67  EVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNG 126

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K  EA ++ D MV+R ++P+  TY TL+ G+   G +    +L   M   G + D   +N
Sbjct: 127 KCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFN 186

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           ILI  Y K ++V+E + ++ +M  +G+ P  V Y T+  GL ++ +++ A+  FE+M   
Sbjct: 187 ILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDK 246

Query: 221 DVAADTSTY-----------------------------------NTFIDGLCKNGYIVEA 245
            +  +   Y                                   NT +D LCK G ++E+
Sbjct: 247 GLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIES 306

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSG------------------------------ 275
            +LF  LG +    D+  Y+ LIDG C +G                              
Sbjct: 307 KKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLING 366

Query: 276 -----RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
                R+E AL LF+ +    +  D++TYNI++HGL    +   A +L+  + E+     
Sbjct: 367 YCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLE 426

Query: 331 VIIFVTLIHGFVRINK 346
           +  +  ++  F + N 
Sbjct: 427 LSTYNIILMDFAKTNS 442



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 151/268 (56%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           +N +I    K+  VD+   +F +M+ + + P+ V Y ++I GLC     ++A   F +M+
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI 244

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           D+G+ P+VV +  ++  LC   K ++A  L+  ++ + + PN   ++T++D  C  G++ 
Sbjct: 245 DKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVI 304

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            +++LF  +  +G   D ++Y+ LI+GYC   +++ A+ L   MVS G+KP  VTY+TL 
Sbjct: 305 ESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLI 364

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            G  +I+++E AL LF+EM+ + V  D  TYN  + GL +      A EL+  +     +
Sbjct: 365 NGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQ 424

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRS 286
           L++  YN ++    K+  L +    FR+
Sbjct: 425 LELSTYNIILMDFAKTNSLMMHFGCFRT 452



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 160/301 (53%), Gaps = 5/301 (1%)

Query: 77  MMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
           M D G   P VV++N I+D L K G +D+A      M+ R V P+A TY++++       
Sbjct: 1   MADDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQ 60

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
            ++RA E+   M    C     +YN +++GYC + + E+A+ ++R+M S GI+P VVTYN
Sbjct: 61  AMDRAMEVLTVMVMPNC----FTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYN 116

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           +L   L +  +   A K+F+ M +  +  D +TY T + G    G +VE  +L   +   
Sbjct: 117 SLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQN 176

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
             +LD   +N LI    K  +++  + +F  + ++ L  + V Y  +I GLC  G++D A
Sbjct: 177 GMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDA 236

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
              F  M +  + PNV+++ +LIH     +K  K  EL+ ++ ++ + P+    + ++D 
Sbjct: 237 MLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDS 296

Query: 376 L 376
           L
Sbjct: 297 L 297



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 94/170 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V +NTI+D LCKEG V ++K LF  +    +NPDV+TY++LI G C A   + A +L
Sbjct: 285 PNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKL 344

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+  G++P  VT++ +++  CK  +M++A  L   M    V P+  TY+ ++ G   
Sbjct: 345 LTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFR 404

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           T +   A+EL+  +   G + +  +YNI++  + K   +      +R  V
Sbjct: 405 TRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSLMMHFGCFRTYV 454



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 59/98 (60%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
            G + V  KP++VTY+T+I+G CK   ++ A ALF +M+   +NPD++TYN ++HGL   
Sbjct: 346 TGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRT 405

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKM 102
                AK L+  + + G Q  + T+N+I+ +  K   +
Sbjct: 406 RRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSL 443


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 107/307 (34%), Positives = 178/307 (57%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTYN +I+G+CKEG +D+A      M      P+V+T+N ++  +C    W +A++
Sbjct: 114 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEK 173

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ +G  PSVVTFN++++ LC+ G +  A  +L+ M      PN+ +Y+ L+ GFC
Sbjct: 174 LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFC 233

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K++RA E    M S GC  D V+YN L+   CK+ +V+ A+ +  ++ SKG  P ++
Sbjct: 234 KEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLI 293

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNT+  GL ++ + E A+KL +EM+R  +  D  TY++ + GL + G + EA++ F  L
Sbjct: 294 TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 353

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             L    +   YN ++ GLCKS + + A++    +  +       TY I+I G+  +G  
Sbjct: 354 EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLA 413

Query: 313 DKAHDLF 319
            +A DL 
Sbjct: 414 KEALDLL 420



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 189/358 (52%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           ++  +   CKE  V +A  L  +M+ +   PDVVTYN LI+G+C     +EA +    M 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
             G QP+V+T N+I+  +C  G+  +A +LL  M+++   P+  T++ L++  C  G + 
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
           RA ++   M   GC  + +SYN L++G+CK K+++ A+     MVS+G  P +VTYNTL 
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 264

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
             L +  +V+ A+++  ++     +    TYNT IDGL K G    A++L   +     +
Sbjct: 265 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 324

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            DI  Y+ L+ GL + G+++ A++ F  L    +  + +TYN ++ GLC   Q D+A D 
Sbjct: 325 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 384

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              M      P    +  LI G        + ++LL+++  + ++  +S   +   +L
Sbjct: 385 LAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAAPVL 442



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 146/282 (51%)

Query: 85  SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELF 144
           S+  F+  +   CK   + +A +LLD M  +  +P+  TY+ L++G C  G+++ A +  
Sbjct: 81  SLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 140

Query: 145 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 204
            +M S GC+ + +++NI++   C      +A  L  +M+ KG  P+VVT+N L   L   
Sbjct: 141 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQ 200

Query: 205 HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
             +  A+ + E+M       ++ +YN  + G CK   +  A+E    +    C  DI  Y
Sbjct: 201 GLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTY 260

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
           N L+  LCK G++++A+E+   L  +     ++TYN +I GL   G+ ++A  L  +M  
Sbjct: 261 NTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR 320

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             + P++I + +L+ G  R  K  + I+  H ++   + P+A
Sbjct: 321 KGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNA 362



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/118 (22%), Positives = 54/118 (45%)

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
             +  ++  +   CK   +  A++L   +  +    DVVTYN++I+G+C +G++D+A   
Sbjct: 80  FSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 139

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +M      PNVI    ++       +     +LL  M  K   P     +++++ L
Sbjct: 140 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL 197



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G+  +PN +TYN+I+ GLCK    D+A      M  +   P   TY  LI G+ +     
Sbjct: 355 GLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAK 414

Query: 69  EAKRLFFEMMDQGV 82
           EA  L  E+  +G+
Sbjct: 415 EALDLLNELCSRGL 428


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 203/377 (53%), Gaps = 18/377 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY  +ID  CK G +++A+ LF +M+    +P VVTY +LIH    A    +A  +
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 380

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV----------------QRDV 117
           F  M+D G +P+ VT+  ++D LCK G + +A  +   ++                +  +
Sbjct: 381 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 440

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
            PN  TY  L+DG C   K++ A EL  +M S GC+ + + Y+ LI+G+CK  +++ A  
Sbjct: 441 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 500

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           ++ +M   G  P+V TY +L   +F+  +++ A+K+  +M +D    +  TY   IDGLC
Sbjct: 501 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 560

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           + G   +A++L   +    C  ++  Y  LIDGL K+G+++++L+LF  + R+    + V
Sbjct: 561 RIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYV 620

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           TY ++I+ LC  G +DKA  L  +M++      +  +   I GF +    S  + +L +M
Sbjct: 621 TYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIAS--LGILEEM 678

Query: 358 KEKKVMPDASIVSMVVD 374
           +    +P A +  M++D
Sbjct: 679 ESYGTVPIAPVYGMLID 695



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 191/387 (49%), Gaps = 22/387 (5%)

Query: 12  CKPNTVTYNTIIDGLCKE------GFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           C P  V YN  I  +C +        +D A+ ++ +M   N   + V   +    LC   
Sbjct: 208 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 267

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            +++A +L  EMM +G  P   T++ ++  LC   K+++A  L   M    V P+ +TY+
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+D FC  G I +A+ LF  M S+GC    V+Y  LI+ Y K K+V +A  ++  MV  
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM----------------QRDDVAADTSTY 229
           G +P  VTY  L  GL +   +  A +++ ++                 R  +A +  TY
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
              +DGLCK   +  A EL   +    CE +   Y+ LIDG CK+G+++ A E+F  + +
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
              +  V TY  +I  +  DG++D A  +   M +++  PNV+ +  +I G  RI +  K
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567

Query: 350 VIELLHKMKEKKVMPDASIVSMVVDLL 376
            ++LL  M+EK   P+    + ++D L
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGL 594



 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 114/349 (32%), Positives = 176/349 (50%), Gaps = 14/349 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  ++DGLCK   VD A  L   M      P+ + Y++LI G C A   + A+ +
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M   G  PSV T+  ++D + K+G++D A ++L  M++    PN  TY+ ++DG C 
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+  +A +L   ME  GC  + V+Y  LI+G  K  +++ +L L+ +M  KG  P  VT
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY----IVEAVELF 249
           Y  L   L     ++ A  L  EM++         Y   I G  K+      I+E +E +
Sbjct: 622 YRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESY 681

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL---PRRVLVADVVTYNIMIHGL 306
            T+ I         Y  LID   K+GRLEIA+EL + +   P  V   D   Y  +I  L
Sbjct: 682 GTVPI------APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSV-KTDNDMYASLIQAL 734

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           C   Q+++A  L+ +M      P + +FV LI G V + K  + ++L +
Sbjct: 735 CLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCY 783



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 152/309 (49%), Gaps = 4/309 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN + Y+ +IDG CK G +D A+ +FLQM      P V TY SLI  +      + A 
Sbjct: 475 CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 534

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++  +M+     P+VVT+  ++D LC+ G+ ++A +LL LM ++   PN  TY+ L+DG 
Sbjct: 535 KVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 594

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GKI+ + +LF  M   GC  + V+Y +LIN  C    +++A  L  EM        +
Sbjct: 595 GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYL 654

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y     G  +      +L + EEM+          Y   ID   K G +  A+EL + 
Sbjct: 655 QGYRCAIQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKE 712

Query: 252 LGILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           +  +   +  D   Y  LI  LC + ++E A  L+  + RR  V ++  +  +I GL   
Sbjct: 713 MMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEV 772

Query: 310 GQMDKAHDL 318
            + D+A  L
Sbjct: 773 KKWDEALQL 781



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 178/449 (39%), Gaps = 95/449 (21%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T       LCKEG    A AL + ++ E+   D V    +I GL  A+ ++EA      M
Sbjct: 77  TVGCFAHALCKEG--RWADALDM-IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRM 133

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
                 P+VVT+  ++    K  ++    R++++M+     PN   +++L+  +C     
Sbjct: 134 RCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDY 193

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV------------------------- 172
             A +L   M + GC    V YNI I   C  +++                         
Sbjct: 194 AYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNK 253

Query: 173 ----------------EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
                           ++A  L +EM+ KG  P   TY+ +   L    +VE A  LF+E
Sbjct: 254 VNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQE 313

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF---RTLGI--------------LKCEL 259
           M+   V  D  TY   ID  CK G I +A  LF   R++G               LK + 
Sbjct: 314 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 373

Query: 260 DIQA------------------YNCLIDGLCKSGRLEIALELFRSL-------------- 287
             QA                  Y  L+DGLCK+G +  A E++  L              
Sbjct: 374 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP 433

Query: 288 --PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
              R  L  +VVTY  ++ GLC   ++D AH+L   M  +   PN I++  LI GF +  
Sbjct: 434 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 493

Query: 346 KPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           K     E+  +M +   +P     + ++D
Sbjct: 494 KIDSAQEVFLQMTKCGYLPSVHTYTSLID 522



 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/390 (24%), Positives = 146/390 (37%), Gaps = 75/390 (19%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           +K     P  VTYN+L+  L  A   +   R+  EM + G      T       LCK G+
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 102 --------------------------------MDEASRLLDLMVQRDVRPNAFTYSTLMD 129
                                            DEA   L  M      PN  TY TL+ 
Sbjct: 91  WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GF    ++   + +   M + GC  +   +N L++ YC  K+   A  L   M + G  P
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210

Query: 190 TVVTYNTLFLG------------------------------------------LFEIHQV 207
             V YN +F+G                                          L  + + 
Sbjct: 211 GYVVYN-IFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 269

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
           + A +L +EM R     DTSTY+  I  LC    + +A  LF+ + ++    D+  Y  L
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           ID  CK+G +E A  LF  +        VVTY  +IH      Q+ +A+D+F  M +   
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 389

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            PN + +  L+ G  +    SK  E+  K+
Sbjct: 390 RPNDVTYGALVDGLCKAGNISKAFEVYAKL 419


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 184/353 (52%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P+ ++Y+T+I+G C+ G +DK   L  +MK + + P+  TY S+I  LC      EA+  
Sbjct: 702  PDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEA 761

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            F EM+ QG+ P  + +  ++D  CK G +  AS+    M  RD+ P+  TY+ ++ GFC 
Sbjct: 762  FSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 821

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             G +  A +LF  M   G + D +++  L+NGYCK   +++A  ++  M+  G  P VVT
Sbjct: 822  IGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVT 881

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            Y TL  GL +   ++ A +L  EM +  +  +  TYN+ ++GLCK+G I EAV+L     
Sbjct: 882  YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 941

Query: 254  ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  D   Y  L+D  CKSG ++ A E+   +  + L   +VT+N++++G C  G ++
Sbjct: 942  AAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLE 1001

Query: 314  KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
                L   M    +APN   F  L+  +   N       +   M  + V PD 
Sbjct: 1002 DGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDG 1054



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 189/367 (51%)

Query: 8    IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
            IG    P+T+ Y T++DG CK G +  A   F +M   +I PDV+TY ++I G C   D 
Sbjct: 766  IGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 825

Query: 68   NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             EA +LF EM+ +G++P ++TF  +M+  CK G + +A R+ + M+Q    PN  TY+TL
Sbjct: 826  VEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTL 885

Query: 128  MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
            +DG C  G ++ A EL   M  +G + +  +YN ++NG CK+  +EEA+ L  E  + G+
Sbjct: 886  IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 945

Query: 188  KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
                VTY TL     +  +++ A ++  EM    +     T+N  ++G C +G + +  +
Sbjct: 946  NADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 1005

Query: 248  LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            L   +       +   +NCL+   C    L+ A  +++ +  R +  D  TY  ++ G C
Sbjct: 1006 LLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHC 1065

Query: 308  NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            N   M +A  LF +M+    + +V  +  LI GF +  K  +  E+  +M+   +  D  
Sbjct: 1066 NARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKE 1125

Query: 368  IVSMVVD 374
            I     D
Sbjct: 1126 IFDFFSD 1132



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 202/367 (55%), Gaps = 2/367 (0%)

Query: 7    EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            E+GV    N  +YN +I  +C+ G +++A  L L M+ +   PDV++Y+++I+G C   +
Sbjct: 662  EVGVCW--NVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGE 719

Query: 67   WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             ++  +L  +M  +G++P+  T+  I+  LC+  K+ EA      M+ + + P+   Y+T
Sbjct: 720  LDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTT 779

Query: 127  LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
            L+DGFC  G I  A + F  M S     D ++Y  +I+G+C+  ++ EA  L+ EM+ +G
Sbjct: 780  LVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRG 839

Query: 187  IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            ++P ++T+  L  G  +   ++ A ++   M +   + +  TY T IDGLCK G +  A 
Sbjct: 840  LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 899

Query: 247  ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            EL   +  +  + +I  YN +++GLCKSG +E A++L        L AD VTY  ++   
Sbjct: 900  ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 959

Query: 307  CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            C  G+MDKA ++  +M    + P ++ F  L++GF          +LL+ M  K + P+A
Sbjct: 960  CKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 1019

Query: 367  SIVSMVV 373
            +  + +V
Sbjct: 1020 TTFNCLV 1026



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 89/245 (36%), Positives = 138/245 (56%)

Query: 5    NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
            N  I   C PN VTY T+IDGLCKEG +D A  L  +M    + P++ TYNS+++GLC +
Sbjct: 868  NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 927

Query: 65   NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
             +  EA +L  E    G+    VT+  +MD  CK+G+MD+A  +L  M+ + ++P   T+
Sbjct: 928  GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTF 987

Query: 125  STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
            + LM+GFCL G +   E+L   M + G   +  ++N L+  YC    ++ A ++Y++M S
Sbjct: 988  NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCS 1047

Query: 185  KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
            +G++P   TY  L  G      ++ A  LF+EM+    +   STY+  I G  K    VE
Sbjct: 1048 RGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVE 1107

Query: 245  AVELF 249
            A E+F
Sbjct: 1108 AREIF 1112



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 184/357 (51%), Gaps = 1/357 (0%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH-ANDWNEAKRLFFEM 77
           ++     L + G + +A+ +F +M    +   V + N  +  L    N    A  +F E 
Sbjct: 601 FDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREF 660

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
            + GV  +V ++N+++  +C+ G+++EA  LL LM  +   P+  +YST+++G+C  G++
Sbjct: 661 PEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGEL 720

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           ++  +L   M+  G K +  +Y  +I   C+  ++ EA   + EM+ +GI P  + Y TL
Sbjct: 721 DKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTL 780

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G  +   +  A K F EM   D+  D  TY   I G C+ G +VEA +LF  +     
Sbjct: 781 VDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGL 840

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           E DI  +  L++G CK+G ++ A  +   + +     +VVTY  +I GLC +G +D A++
Sbjct: 841 EPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 900

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           L  +M +  + PN+  + ++++G  +     + ++L+ + +   +  D    + ++D
Sbjct: 901 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 957



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 84/157 (53%), Gaps = 1/157 (0%)

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS-GRLEI 279
           D  +D   ++ F   L + G + EA ++F  +      L + + N  +  L K   +   
Sbjct: 593 DWGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTAT 652

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A+ +FR  P   +  +V +YNI+IH +C  G++++AH L L ME     P+VI + T+I+
Sbjct: 653 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVIN 712

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           G+ R  +  KV +L+ KMK+K + P++     ++ LL
Sbjct: 713 GYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLL 749



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 73/164 (44%)

Query: 8    IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
            +G   +P  VT+N +++G C  G ++  + L   M  + I P+  T+N L+   C  N+ 
Sbjct: 976  LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNL 1035

Query: 68   NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
              A  ++ +M  +GV+P   T+  ++   C    M EA  L   M  +    +  TYS L
Sbjct: 1036 KAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVL 1095

Query: 128  MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
            + GF    K   A E+F  M   G   D   ++   +   K K 
Sbjct: 1096 IKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKR 1139



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 48/102 (47%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            +P+  TY  ++ G C    + +A  LF +MKG+  +  V TY+ LI G      + EA+ 
Sbjct: 1051 EPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEARE 1110

Query: 73   LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
            +F +M   G+      F+   D   K  + D     +D +++
Sbjct: 1111 IFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 1152


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/375 (33%), Positives = 205/375 (54%), Gaps = 15/375 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   +N +I GL K+G  D+A  LF  M+   +NPD+ TYN++I GLC + +  +A+ L
Sbjct: 95  PDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKAREL 154

Query: 74  FFEMMDQGVQ--PSVVTFNVIMDE-LCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             EM+ +G +  P +VT+N +++  +CK+G ++EA  +LD M      P+  TY++++  
Sbjct: 155 LEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHA 214

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C+ G++  A E+   +++M C  D V++N L++G+CK   +  AL +  EM  + I P 
Sbjct: 215 LCVAGRVVEAAEI---LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPD 271

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V+TY  L  GL  + QV+ A  L EE+ R     D   Y + +DGLCK+G I EA +L +
Sbjct: 272 VITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVK 331

Query: 251 TLG---ILKCELDIQ------AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
            +    IL   + I        YN ++ GL K G +  A+ L   L  R  V DVVTYN 
Sbjct: 332 EMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNT 391

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +I GLC   ++ +A DL  +M      PN +   +++ G  R+ +      L+ +M  K+
Sbjct: 392 LIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKR 451

Query: 362 VMPDASIVSMVVDLL 376
             P+  + + ++D L
Sbjct: 452 HAPNVVVYTSLIDGL 466



 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 123/377 (32%), Positives = 198/377 (52%), Gaps = 16/377 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VT+  +I G CK G   +A      +   ++ PDV  +N LIHGL    + ++A 
Sbjct: 58  CSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAV 117

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR--PNAFTYSTLMD 129
           +LF  M    V P + T+N ++  LCK+G +++A  LL+ M++R  +  P+  TY+TL++
Sbjct: 118 KLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLIN 177

Query: 130 -GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C  G +  A E+   M+  G   D ++YN +I+  C    V EA  + + M      
Sbjct: 178 AGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCS 234

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P +VT+NTL  G  +   +  AL++ EEM R+++  D  TY   ++GLC+ G +  A  L
Sbjct: 235 PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYL 294

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV---------TY 299
              +       D+ AY  L+DGLCKSG +E A +L + +  R ++A++V         TY
Sbjct: 295 LEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTY 354

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           NI++ GL  DG + KA  L  D+      P+V+ + TLI G  + N+  +  +L  +M  
Sbjct: 355 NIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMAS 414

Query: 360 KKVMP-DASIVSMVVDL 375
               P D ++ S+V  L
Sbjct: 415 LGCFPNDVTLGSVVFGL 431



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 186/364 (51%), Gaps = 13/364 (3%)

Query: 14  PNTVTYNTIID-GLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           P+ VTYNT+I+ G+CK+G V++A  +   MK     PDV+TYNS+IH LC A    EA  
Sbjct: 167 PDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAE 226

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M      P +VTFN ++D  CK G +  A  +L+ M + ++ P+  TY+ L++G C
Sbjct: 227 ILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLC 283

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM---------V 183
             G++  A  L   +   G   D ++Y  L++G CK+ E+EEA  L +EM         V
Sbjct: 284 RVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMV 343

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
           S  + P + TYN +  GL +   +  A+ L  ++       D  TYNT IDGLCK   + 
Sbjct: 344 SINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVR 403

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           EA +L   +  L C  +      ++ GLC+ GR++ A  L   + R+    +VV Y  +I
Sbjct: 404 EACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLI 463

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            GLC   +MD A  +   M    VA +   +  LI   +   + ++ + +  +M  +  +
Sbjct: 464 DGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFL 523

Query: 364 PDAS 367
           PD S
Sbjct: 524 PDGS 527



 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 189/376 (50%), Gaps = 15/376 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +  +YN ++D L K G   +   ++  +     +P++VT+  LI G C A     A  
Sbjct: 24  KHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALE 83

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
               + +  V P V  FN ++  L K+G  D+A +L + M    V P+ FTY+T++ G C
Sbjct: 84  FLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLC 143

Query: 133 LTGKINRAEELFGSMESMGCKH--DDVSYNILIN-GYCKNKEVEEALSLYREMVSKGIKP 189
            +G + +A EL   M   G K   D V+YN LIN G CK+ +VEEAL +   M   G  P
Sbjct: 144 KSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAP 203

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V+TYN++   L    +V  A ++ + M     + D  T+NT +DG CK G +  A+E+ 
Sbjct: 204 DVITYNSIIHALCVAGRVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVL 260

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +       D+  Y  L++GLC+ G++++A  L   + R+  + DV+ Y  ++ GLC  
Sbjct: 261 EEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKS 320

Query: 310 GQMDKAHDLFLDMEENAV---------APNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           G++++AH L  +M    +          P +  +  ++ G ++    SK + L+  +  +
Sbjct: 321 GEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVAR 380

Query: 361 KVMPDASIVSMVVDLL 376
             +PD    + ++D L
Sbjct: 381 GYVPDVVTYNTLIDGL 396



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 185/343 (53%), Gaps = 8/343 (2%)

Query: 39  FLQMKGEN--INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
           F    GE      DV +YN L+  L  +       +++ +++  G  P++VTF +++   
Sbjct: 13  FFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGN 72

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           CK G+   A   L  + +  V P+ + ++ L+ G    G  ++A +LF +MES     D 
Sbjct: 73  CKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDI 132

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIK--PTVVTYNTLF-LGLFEIHQVEHALKL 213
            +YN +I+G CK+  +E+A  L  EM+ +G K  P +VTYNTL   G+ +   VE AL++
Sbjct: 133 FTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEI 192

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
            + M+    A D  TYN+ I  LC  G +VEA E+ +T+    C  D+  +N L+DG CK
Sbjct: 193 LDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCK 249

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           +G L  ALE+   + R  ++ DV+TY I+++GLC  GQ+  A  L  ++      P+VI 
Sbjct: 250 AGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIA 309

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + +L+ G  +  +  +  +L+ +M  ++++ +   ++MV  L 
Sbjct: 310 YTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLF 352



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 167/329 (50%), Gaps = 14/329 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT+NT++DG CK G + +A  +  +M  ENI PDV+TY  L++GLC       A 
Sbjct: 233 CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAF 292

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR---------PNAF 122
            L  E++ QG  P V+ +  ++D LCK+G+++EA +L+  M  R++          P  F
Sbjct: 293 YLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLF 352

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TY+ ++ G    G I++A  L   + + G   D V+YN LI+G CK   V EA  L  EM
Sbjct: 353 TYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEM 412

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
            S G  P  VT  ++  GL  + +V+ A  L  EM R   A +   Y + IDGLCK+  +
Sbjct: 413 ASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRM 472

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            +A  +   +      LD  AY  LI  +   GR+  A+ ++  +  R  + D  T   +
Sbjct: 473 DDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
                 +  M  +   + ++EENA +  V
Sbjct: 533 -----EEAAMSNSVFEWTNLEENASSDRV 556



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 151/285 (52%), Gaps = 11/285 (3%)

Query: 98  KNGKMDEASRLLDLMVQRD-VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           ++ + D A +  D   ++D  + +  +Y+ L+D    +G   R  +++  +   GC  + 
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNL 62

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           V++ ILI G CK  +   AL   R +    + P V  +N L  GLF+    + A+KLFE 
Sbjct: 63  VTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFEN 122

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF----RTLGILKCELDIQAYNCLID-GL 271
           M+   V  D  TYNT I GLCK+G + +A EL     R  G  K   DI  YN LI+ G+
Sbjct: 123 MESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGG--KSAPDIVTYNTLINAGI 180

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           CK G +E ALE+   +       DV+TYN +IH LC  G++ +A ++   M   + +P++
Sbjct: 181 CKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDL 237

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + F TL+ GF +     + +E+L +M  + ++PD    +++V+ L
Sbjct: 238 VTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGL 282


>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
 gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g31400, chloroplastic; Flags: Precursor
 gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
 gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
          Length = 918

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 117/306 (38%), Positives = 170/306 (55%), Gaps = 1/306 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFL-QMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           +PN VTYN +ID   K G   K  A F  +M+   + PD +T+NSL+        W  A+
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAAR 359

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM ++ ++  V ++N ++D +CK G+MD A  +L  M  + + PN  +YST++DGF
Sbjct: 360 NLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGF 419

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+ + A  LFG M  +G   D VSYN L++ Y K    EEAL + REM S GIK  V
Sbjct: 420 AKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDV 479

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN L  G  +  + +   K+F EM+R+ V  +  TY+T IDG  K G   EA+E+FR 
Sbjct: 480 VTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFRE 539

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                   D+  Y+ LID LCK+G +  A+ L   + +  +  +VVTYN +I        
Sbjct: 540 FKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSAT 599

Query: 312 MDKAHD 317
           MD++ D
Sbjct: 600 MDRSAD 605



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 175/332 (52%), Gaps = 4/332 (1%)

Query: 15  NTV-TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN-DWNEAKR 72
           NTV  ++ +I    + G  ++A ++F  MK   + P++VTYN++I        ++ +  +
Sbjct: 266 NTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK 325

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR-LLDLMVQRDVRPNAFTYSTLMDGF 131
            F EM   GVQP  +TFN ++  +C  G + EA+R L D M  R +  + F+Y+TL+D  
Sbjct: 326 FFDEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A E+   M       + VSY+ +I+G+ K    +EAL+L+ EM   GI    
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+YNTL     ++ + E AL +  EM    +  D  TYN  + G  K G   E  ++F  
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       ++  Y+ LIDG  K G  + A+E+FR      L ADVV Y+ +I  LC +G 
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           +  A  L  +M +  ++PNV+ + ++I  F R
Sbjct: 565 VGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 177/356 (49%), Gaps = 1/356 (0%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           + +I  L + G V  AK +F           V  +++LI     +    EA  +F  M +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296

Query: 80  QGVQPSVVTFNVIMDELCKNG-KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            G++P++VT+N ++D   K G +  + ++  D M +  V+P+  T+++L+      G   
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A  LF  M +   + D  SYN L++  CK  +++ A  +  +M  K I P VV+Y+T+ 
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            G  +  + + AL LF EM+   +A D  +YNT +    K G   EA+++ R +  +  +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            D+  YN L+ G  K G+ +   ++F  + R  ++ +++TY+ +I G    G   +A ++
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           F + +   +  +V+++  LI    +       + L+ +M ++ + P+    + ++D
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 157/309 (50%), Gaps = 3/309 (0%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           AKR+F      G   +V  F+ ++    ++G  +EA  + + M +  +RPN  TY+ ++D
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311

Query: 130 GFCLTG--KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
             C  G  +  +  + F  M+  G + D +++N L+    +    E A +L+ EM ++ I
Sbjct: 312 A-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRI 370

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +  V +YNTL   + +  Q++ A ++  +M    +  +  +Y+T IDG  K G   EA+ 
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           LF  +  L   LD  +YN L+    K GR E AL++ R +    +  DVVTYN ++ G  
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G+ D+   +F +M+   V PN++ + TLI G+ +     + +E+  + K   +  D  
Sbjct: 491 KQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVV 550

Query: 368 IVSMVVDLL 376
           + S ++D L
Sbjct: 551 LYSALIDAL 559



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 138/301 (45%), Gaps = 33/301 (10%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           V  K + VTYN ++ G  K+G  D+ K +F +MK E++ P+++TY++LI G      + E
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +F E    G++  VV ++ ++D LCKNG +  A  L+D M +  + PN  TY++++D
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592

Query: 130 GFCLTGKINRAEEL-------FGSMESMGCKHDDVSYNILINGYCKN-------KEVEEA 175
            F  +  ++R+ +        F S         + +  I + G           K+ EE 
Sbjct: 593 AFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEG 652

Query: 176 -------LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
                  L ++R+M    IKP VVT++ +       +  E A  L EE++      D   
Sbjct: 653 MQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNKV 708

Query: 229 YNTFIDGLC---KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC----KSGRLEIAL 281
           Y   + GL    +    ++A  LF  +  +        YN L D L     K G   +AL
Sbjct: 709 YGV-VHGLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVAL 767

Query: 282 E 282
           E
Sbjct: 768 E 768


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 184/353 (52%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P+ ++Y+T+++G C+ G +DK   L   MK + + P+   Y S+I  LC      EA+  
Sbjct: 722  PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 781

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            F EM+ QG+ P  V +  ++D  CK G +  AS+    M  RD+ P+  TY+ ++ GFC 
Sbjct: 782  FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 841

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             G +  A +LF  M   G + D V++  LINGYCK   +++A  ++  M+  G  P VVT
Sbjct: 842  IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 901

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            Y TL  GL +   ++ A +L  EM +  +  +  TYN+ ++GLCK+G I EAV+L     
Sbjct: 902  YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 961

Query: 254  ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  D   Y  L+D  CKSG ++ A E+ + +  + L   +VT+N++++G C  G ++
Sbjct: 962  AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 1021

Query: 314  KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
                L   M    +APN   F +L+  +   N       +   M  + V PD 
Sbjct: 1022 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 1074



 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 186/361 (51%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P+TV Y T+IDG CK G +  A   F +M   +I PDV+TY ++I G C   D  EA +L
Sbjct: 792  PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 851

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            F EM  +G++P  VTF  +++  CK G M +A R+ + M+Q    PN  TY+TL+DG C 
Sbjct: 852  FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 911

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             G ++ A EL   M  +G + +  +YN ++NG CK+  +EEA+ L  E  + G+    VT
Sbjct: 912  EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 971

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            Y TL     +  +++ A ++ +EM    +     T+N  ++G C +G + +  +L   + 
Sbjct: 972  YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 1031

Query: 254  ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  +   +N L+   C    L+ A  +++ +  R +  D  TY  ++ G C    M 
Sbjct: 1032 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 1091

Query: 314  KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            +A  LF +M+    + +V  +  LI GF++  K  +  E+  +M+ + +  D  I     
Sbjct: 1092 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFS 1151

Query: 374  D 374
            D
Sbjct: 1152 D 1152



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 198/367 (53%), Gaps = 2/367 (0%)

Query: 7    EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            E+GV    N  +YN +I  +C+ G + +A  L L M+ +   PDV++Y+++++G C   +
Sbjct: 682  EVGVCW--NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 739

Query: 67   WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             ++  +L   M  +G++P+   +  I+  LC+  K+ EA      M+++ + P+   Y+T
Sbjct: 740  LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 799

Query: 127  LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
            L+DGFC  G I  A + F  M S     D ++Y  +I+G+C+  ++ EA  L+ EM  KG
Sbjct: 800  LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 859

Query: 187  IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            ++P  VT+  L  G  +   ++ A ++   M +   + +  TY T IDGLCK G +  A 
Sbjct: 860  LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 919

Query: 247  ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            EL   +  +  + +I  YN +++GLCKSG +E A++L        L AD VTY  ++   
Sbjct: 920  ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 979

Query: 307  CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            C  G+MDKA ++  +M    + P ++ F  L++GF          +LL+ M  K + P+A
Sbjct: 980  CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 1039

Query: 367  SIVSMVV 373
            +  + +V
Sbjct: 1040 TTFNSLV 1046



 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 182/361 (50%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            KPN+  Y +II  LC+   + +A+  F +M  + I PD V Y +LI G C   D   A +
Sbjct: 756  KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 815

Query: 73   LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             F+EM  + + P V+T+  I+   C+ G M EA +L   M  + + P++ T++ L++G+C
Sbjct: 816  FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 875

Query: 133  LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              G +  A  +   M   GC  + V+Y  LI+G CK  +++ A  L  EM   G++P + 
Sbjct: 876  KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 935

Query: 193  TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            TYN++  GL +   +E A+KL  E +   + ADT TY T +D  CK+G + +A E+ + +
Sbjct: 936  TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 995

Query: 253  GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 +  I  +N L++G C  G LE   +L   +  + +  +  T+N ++   C    +
Sbjct: 996  LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 1055

Query: 313  DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
              A  ++ DM    V P+   +  L+ G  +     +   L  +MK K      S  S++
Sbjct: 1056 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 1115

Query: 373  V 373
            +
Sbjct: 1116 I 1116



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 138/245 (56%)

Query: 5    NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
            N  I   C PN VTY T+IDGLCKEG +D A  L  +M    + P++ TYNS+++GLC +
Sbjct: 888  NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 947

Query: 65   NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
             +  EA +L  E    G+    VT+  +MD  CK+G+MD+A  +L  M+ + ++P   T+
Sbjct: 948  GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 1007

Query: 125  STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
            + LM+GFCL G +   E+L   M + G   +  ++N L+  YC    ++ A ++Y++M S
Sbjct: 1008 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 1067

Query: 185  KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
            +G+ P   TY  L  G  +   ++ A  LF+EM+    +   STY+  I G  K    +E
Sbjct: 1068 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 1127

Query: 245  AVELF 249
            A E+F
Sbjct: 1128 AREVF 1132



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 155/283 (54%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            +P++VT+  +I+G CK G +  A  +   M     +P+VVTY +LI GLC   D + A  
Sbjct: 861  EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 920

Query: 73   LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            L  EM   G+QP++ T+N I++ LCK+G ++EA +L+       +  +  TY+TLMD +C
Sbjct: 921  LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 980

Query: 133  LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             +G++++A+E+   M   G +   V++N+L+NG+C +  +E+   L   M++KGI P   
Sbjct: 981  KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 1040

Query: 193  TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            T+N+L       + ++ A  ++++M    V  D  TY   + G CK   + EA  LF+ +
Sbjct: 1041 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 1100

Query: 253  GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
                  + +  Y+ LI G  K  +   A E+F  + R  L AD
Sbjct: 1101 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 1143



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 138/222 (62%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            +PN  TYN+I++GLCK G +++A  L  + +   +N D VTY +L+   C + + ++A+ 
Sbjct: 931  QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 990

Query: 73   LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            +  EM+ +G+QP++VTFNV+M+  C +G +++  +LL+ M+ + + PNA T+++L+  +C
Sbjct: 991  ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 1050

Query: 133  LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +   +  A  ++  M S G   D  +Y  L+ G+CK + ++EA  L++EM  KG   +V 
Sbjct: 1051 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 1110

Query: 193  TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
            TY+ L  G  +  +   A ++F++M+R+ +AAD   ++ F D
Sbjct: 1111 TYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 1152



 Score =  157 bits (397), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 160/302 (52%)

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F E  + GV  +V ++N+++  +C+ G++ EA  LL LM  +   P+  +YST+++G+C
Sbjct: 676 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 735

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++++  +L   M+  G K +   Y  +I   C+  ++ EA   + EM+ +GI P  V
Sbjct: 736 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 795

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y TL  G  +   +  A K F EM   D+  D  TY   I G C+ G +VEA +LF  +
Sbjct: 796 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 855

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                E D   +  LI+G CK+G ++ A  +   + +     +VVTY  +I GLC +G +
Sbjct: 856 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 915

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A++L  +M +  + PN+  + ++++G  +     + ++L+ + +   +  D    + +
Sbjct: 916 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 975

Query: 373 VD 374
           +D
Sbjct: 976 MD 977



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 112/241 (46%), Gaps = 1/241 (0%)

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKN-KEVEEALSLYREMVSKGIKPTVVT 193
           G +  A  +F  M + G      S N+ +    K+  +   A+ ++RE    G+   V +
Sbjct: 632 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 691

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +   + ++ +++ A  L   M+      D  +Y+T ++G C+ G + +  +L   + 
Sbjct: 692 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 751

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + +   Y  +I  LC+  +L  A E F  + R+ ++ D V Y  +I G C  G + 
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A   F +M    + P+V+ +  +I GF +I    +  +L H+M  K + PD+   + ++
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 871

Query: 374 D 374
           +
Sbjct: 872 N 872



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 1/157 (0%)

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS-GRLEI 279
           D  +D   ++ F   L   G + EA  +F  +      L + + N  +  L K   +   
Sbjct: 613 DWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 672

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A+ +FR  P   +  +V +YNI+IH +C  G++ +AH L L ME     P+VI + T+++
Sbjct: 673 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 732

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           G+ R  +  KV +L+  MK K + P++ I   ++ LL
Sbjct: 733 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLL 769



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%)

Query: 8    IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
            +G   +P  VT+N +++G C  G ++  + L   M  + I P+  T+NSL+   C  N+ 
Sbjct: 996  LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 1055

Query: 68   NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
              A  ++ +M  +GV P   T+  ++   CK   M EA  L   M  +    +  TYS L
Sbjct: 1056 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 1115

Query: 128  MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
            + GF    K   A E+F  M   G   D   ++   +   K K 
Sbjct: 1116 IKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 1159



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 94/190 (49%), Gaps = 3/190 (1%)

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY-IVE 244
           G  P V  ++  F  L +   +  A ++FE+M    +     + N ++  L K+ Y    
Sbjct: 615 GSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 672

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A+ +FR    +    ++ +YN +I  +C+ GR++ A  L   +  +    DV++Y+ +++
Sbjct: 673 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 732

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G C  G++DK   L   M+   + PN  I+ ++I    RI K ++  E   +M  + ++P
Sbjct: 733 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 792

Query: 365 DASIVSMVVD 374
           D  + + ++D
Sbjct: 793 DTVVYTTLID 802



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 49/101 (48%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P+  TY  ++ G CK   + +A  LF +MKG+  +  V TY+ LI G      + EA+ +
Sbjct: 1072 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 1131

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
            F +M  +G+      F+   D   K  + D     +D +++
Sbjct: 1132 FDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 1172


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 181/362 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K ++ TYN +I GL   GFV K   L L+M+ E I P VVTYN++IHGL  +     A+ 
Sbjct: 299 KASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQA 358

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM   G+ P V+T+N +++  CK G   EA  L   + +  + P   TY+ L+DG+C
Sbjct: 359 KFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYC 418

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  L   M   GC  D  +Y IL+ G      +      + EM+SKG++P   
Sbjct: 419 RLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCF 478

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YNT       +  +  + +L E +  + +++DT TYN  IDGLCK G + +A EL   +
Sbjct: 479 AYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQM 538

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D   Y CLI   C+ G L  A + F  +    L    VTY ++IH  C  G +
Sbjct: 539 ISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNL 598

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A+  F  M E  V PN I +  LIH   R+ +        ++M E+ ++P+    +++
Sbjct: 599 YSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLL 658

Query: 373 VD 374
           +D
Sbjct: 659 ID 660



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 163/340 (47%), Gaps = 3/340 (0%)

Query: 39  FLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
           F +M    + PDV   N ++  L  A  W++   +  EM+  G++PS+VT+N ++D   K
Sbjct: 184 FREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSK 243

Query: 99  NGKMDEASRLLDLMVQRDVR--PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
            G+ D+   LL  M  R     PN  TY+ ++ G    G +  A EL   M  +  K   
Sbjct: 244 EGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMR-LSKKASS 302

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            +YN LI G      V++   L  EM ++GI PTVVTYN +  GL +  Q+E A   F E
Sbjct: 303 FTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVE 362

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M+   +  D  TYN+ ++G CK G   EA+ LF  L        +  YN LIDG C+ G 
Sbjct: 363 MRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGD 422

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           LE A  L   +  +  + DV TY I++ G  N   +    + F +M    + P+   + T
Sbjct: 423 LEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNT 482

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            I   + +   SK  +L   +  + +  D    ++++D L
Sbjct: 483 RICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGL 522



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 174/372 (46%), Gaps = 43/372 (11%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+    N ++  L      D   A+  +M    I P +VTYN+L+         ++   L
Sbjct: 194 PDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDKIDML 253

Query: 74  FFEMMDQGVQ--PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             EM  +G    P+ VT+NV++  L + G ++EA+ L++ M +   + ++FTY+ L+ G 
Sbjct: 254 LKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEM-RLSKKASSFTYNPLITGL 312

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G + + ++L   ME+ G     V+YN +I+G  ++ ++E A + + EM + G+ P V
Sbjct: 313 LARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDV 372

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYN+L  G  +    + AL LF +++R  +A    TYN  IDG C+ G + EA  L   
Sbjct: 373 ITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEE 432

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELF--------------------------- 284
           +    C  D+  Y  L+ G      L +  E F                           
Sbjct: 433 MVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGD 492

Query: 285 --RSLPRRVLV------ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
             +S   R ++      +D VTYNI+I GLC  G +  A +L + M  N + P+ I +  
Sbjct: 493 ISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTC 552

Query: 337 LIH-----GFVR 343
           LIH     GF+R
Sbjct: 553 LIHAHCERGFLR 564



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 35/257 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  +TYN +IDG C+ G +++A+ L  +M  +   PDV TY  L+ G  +       +  
Sbjct: 405 PTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREF 464

Query: 74  FFEMMDQGVQPS-----------------------------------VVTFNVIMDELCK 98
           F EM+ +G++P                                     VT+N+++D LCK
Sbjct: 465 FDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCK 524

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
            G + +A  L+  M+   ++P+  TY+ L+   C  G +  A + F  M S G     V+
Sbjct: 525 TGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVT 584

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y ++I+ YC+   +  A   +R+M+ +G++P  +TYN L   L  + + + A + F EM 
Sbjct: 585 YTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEML 644

Query: 219 RDDVAADTSTYNTFIDG 235
              +  +  TY   IDG
Sbjct: 645 ERGLVPNKYTYTLLIDG 661



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 38/236 (16%)

Query: 176 LSLYREMVSK-----------------------------------GIKPTVVTYNTLFLG 200
           LS +REM S                                    GI+P++VTYNTL   
Sbjct: 181 LSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDS 240

Query: 201 LFEIHQVEHALKLFEEMQRDDVA--ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
             +  + +    L +EM+    +   +  TYN  I GL + GY+ EA EL   + + K +
Sbjct: 241 FSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSK-K 299

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
                YN LI GL   G ++   +L   +    ++  VVTYN MIHGL   GQ++ A   
Sbjct: 300 ASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAK 359

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           F++M    + P+VI + +L++G+ +     + + L   ++   + P     ++++D
Sbjct: 360 FVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILID 415


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 112/325 (34%), Positives = 182/325 (56%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN ++YN +I+GLC+EG + +   +  +M      PD VT+N+LI+G C+  ++++A  L
Sbjct: 271 PNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVL 330

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+  G+ P+VVT+  +++ +CK G ++ A   LD M  R + PN  TY+TL+DGF  
Sbjct: 331 HAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQ 390

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G + +A ++   M   G     ++YN LING+C    +E+A  L +EM+ +G  P VV+
Sbjct: 391 QGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVS 450

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+T+  G     ++E A +L  EM    ++ D +TY++ I GLCK   + E  +LF+ + 
Sbjct: 451 YSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEML 510

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            L    D   Y  LI+  C  G L+ AL L   + ++    D+VTYN++I+G     +  
Sbjct: 511 SLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTK 570

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLI 338
           +A  L L +      PN I + TLI
Sbjct: 571 EAKRLLLKLLYEESVPNEITYNTLI 595



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 194/362 (53%), Gaps = 1/362 (0%)

Query: 14  PNTVTYNTIIDGLCK-EGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           P  ++YN I+D + + +  V  A+ +F +M    ++P+V TYN LI G C A +      
Sbjct: 165 PGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLX 224

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM   G  P+VVT+N I+D  CK  K+ EA +LL LM  + + PN  +Y+ +++G C
Sbjct: 225 FFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLC 284

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++    E+   M       D V++N LINGYC      +AL L+ EMV  G+ P VV
Sbjct: 285 REGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVV 344

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL   + +   +  A++  ++M+   +  +  TY T IDG  + G++ +A ++ + +
Sbjct: 345 TYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEM 404

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   I  YN LI+G C  GR+E A  L + +  R  + DVV+Y+ +I G C + ++
Sbjct: 405 VENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQEL 464

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +KA  L ++M    ++P+V  + +LI G  +  +  +V +L  +M    + PD    + +
Sbjct: 465 EKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSL 524

Query: 373 VD 374
           ++
Sbjct: 525 IN 526



 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/380 (31%), Positives = 197/380 (51%), Gaps = 9/380 (2%)

Query: 4   GNGEIGVV---------CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTY 54
           GN E+G+          C PN VTYNTIID  CK   + +A  L   M  + +NP++++Y
Sbjct: 217 GNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISY 276

Query: 55  NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
           N +I+GLC      E   +  EM  +   P  VTFN +++  C  G   +A  L   MV+
Sbjct: 277 NVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVK 336

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
             + PN  TY+TL++  C  G +NRA E    M   G   +  +Y  LI+G+ +   +++
Sbjct: 337 NGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQ 396

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           A  + +EMV  G  PT++TYN L  G   + ++E A  L +EM       D  +Y+T I 
Sbjct: 397 AYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIIS 456

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
           G C+N  + +A +L   +       D+  Y+ LI GLCK  RL    +LF+ +    L  
Sbjct: 457 GFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPP 516

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           D VTY  +I+  C +G +DKA  L  +M +   +P+++ +  LI+GF + ++  +   LL
Sbjct: 517 DEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL 576

Query: 355 HKMKEKKVMPDASIVSMVVD 374
            K+  ++ +P+    + ++D
Sbjct: 577 LKLLYEESVPNEITYNTLID 596



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 150/295 (50%), Gaps = 1/295 (0%)

Query: 81  GVQPSVVTFNVIMDELCKNGK-MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
           G  P V+++N I+D + +  + +  A  +   MV+  V PN +TY+ L+ GFC  G +  
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
               FG ME  GC  + V+YN +I+ YCK +++ EA  L R M  KG+ P +++YN +  
Sbjct: 222 GLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVIN 281

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           GL    Q++   ++ EEM +     D  T+NT I+G C  G   +A+ L   +       
Sbjct: 282 GLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSP 341

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           ++  Y  LI+ +CK+G L  A+E    +  R L  +  TY  +I G    G + +A+ + 
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIM 401

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +M EN   P +I +  LI+G   + +      LL +M E+  +PD    S ++ 
Sbjct: 402 KEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIIS 456



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 132/239 (55%), Gaps = 1/239 (0%)

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKE-VEEALSLYREMVSKGIKPTVVTYN 195
           IN+A  +    +S G     +SYN +++   + K+ V+ A  +++EMV  G+ P V TYN
Sbjct: 148 INKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYN 207

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
            L  G      +E  L  F EM+R+    +  TYNT ID  CK   I EA +L R + + 
Sbjct: 208 ILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALK 267

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
               ++ +YN +I+GLC+ G+++   E+   + +R  V D VT+N +I+G CN G   +A
Sbjct: 268 GLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQA 327

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             L  +M +N ++PNV+ + TLI+   +    ++ +E L +M+++ + P+    + ++D
Sbjct: 328 LVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLID 386



 Score =  130 bits (328), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 113/204 (55%), Gaps = 15/204 (7%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY+++I GLCK+  + +   LF +M    + PD VTY SLI+  C   D ++A RL
Sbjct: 481 PDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRL 540

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD---- 129
             EM+ +G  P +VT+NV+++   K  +  EA RLL  ++  +  PN  TY+TL+D    
Sbjct: 541 HDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNN 600

Query: 130 -----------GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
                      GFC+ G +N A+ +  SM   G K ++  YN++I+G+ K   +E+A +L
Sbjct: 601 LEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNL 660

Query: 179 YREMVSKGIKPTVVTYNTLFLGLF 202
           Y+EM+  G  P  VT   L   L+
Sbjct: 661 YKEMLHSGFAPHSVTIMALAKSLY 684


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/385 (32%), Positives = 206/385 (53%), Gaps = 23/385 (5%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN ++Y+T++DGLCK G +D+A  L+ +M  ++  PD+V Y S + GLC AN   EA 
Sbjct: 175 CEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEAC 234

Query: 72  RLFFEMMDQGVQPSVVTF-----------------NVIMDELCKNGKMDEASRLLDLMVQ 114
               +M+ +G +   V F                 N +++ LC++G +DEA +  + M+ 
Sbjct: 235 DCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMIS 294

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG---CKHDDVSYNILINGYCKNKE 171
           R+  P+A  ++TL+   C + ++     LF  M+SM    C  +  +YNI+++  CK K+
Sbjct: 295 RNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQ 354

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           ++EA  L  EM + G+ P VVTY+ L  GL ++ +++ A  L EEM ++ V  D+ T  +
Sbjct: 355 LDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDAS 414

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            ++ L K G +  A+    T+       D+  YN L+DGLCK+GR++ A+     +    
Sbjct: 415 ILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK 474

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
              DV +Y I+I  LC  GQ   AH +F +M +  V P+ +++ +L+ G  R       +
Sbjct: 475 CTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLAL 534

Query: 352 ELLHKMKEKKVMPDASIVSMVVDLL 376
           ELL   K     PD  +  MVVD L
Sbjct: 535 ELL---KTSLCKPDFVMHKMVVDGL 556



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/385 (31%), Positives = 198/385 (51%), Gaps = 23/385 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY+ ++ GLCK G +DKAK L  Q++   +  +V+TY+ +I G C A+  ++A  +
Sbjct: 71  PDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEI 130

Query: 74  FFEM-MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           F  M    G  P VVTFN ++  LC   +M EA  L + M +    PN  +YSTL+DG C
Sbjct: 131 FKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLC 190

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ A  L+  M    C  D V+Y   + G CK   V EA    R+MV+KG K   V
Sbjct: 191 KAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAV 250

Query: 193 TYNTLFLGLF---------EIHQVEH---------ALKLFEEMQRDDVAADTSTYNTFID 234
            ++T+ +G+          +   +EH         A K FEEM   +       +NT I 
Sbjct: 251 AFSTV-IGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIH 309

Query: 235 GLCKNGYIVEAVELFRTLGILK---CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            +CK+  + + V LF+ +  +K   C  +++ YN ++D LCK+ +L+ A EL   +    
Sbjct: 310 AVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYG 369

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           L  DVVTY+ ++ GLC  G++D+A DL  +M +  V P+     ++++   +  K    +
Sbjct: 370 LSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYAL 429

Query: 352 ELLHKMKEKKVMPDASIVSMVVDLL 376
             L  MK +   PD    + ++D L
Sbjct: 430 SHLETMKARGSTPDLVTYNTLLDGL 454



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 170/315 (53%), Gaps = 6/315 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN---INPDVVTYNSLIHGLCHANDWNEA 70
           P+   +NT+I  +CK   +     LF +MK        P++ TYN ++  LC A   +EA
Sbjct: 299 PSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEA 358

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           + L  EM + G+ P VVT++ ++D LCK GK+D A  LL+ M +  V P++FT +++++ 
Sbjct: 359 QELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNA 418

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               GK++ A     +M++ G   D V+YN L++G CK   ++EA++   +MV+    P 
Sbjct: 419 LSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V +Y  +   L    Q   A  +F+EM +  V  DT  Y++ +DGL +NG    A+EL +
Sbjct: 479 VFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK 538

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
           T     C+ D   +  ++DGLCK+G+ E A E+   +      AD  TY  ++ GL   G
Sbjct: 539 TS---LCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLG 595

Query: 311 QMDKAHDLFLDMEEN 325
           ++DKA  L  D  E 
Sbjct: 596 KVDKARQLVDDASET 610



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 184/382 (48%), Gaps = 56/382 (14%)

Query: 51  VVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD 110
           V TYN  +  L  AN    A   F +M  +G  P   T+++++  LCK G++D+A  LL 
Sbjct: 38  VFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLG 97

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES-MGCKHDDVSYNILINGYCKN 169
            + +  V+ N  TYS ++DG C   +++ A E+F +M +  GC  D V++N L+ G C  
Sbjct: 98  QLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSG 157

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
           + + EA  L+  M   G +P V++Y+TL  GL +  +++ A +L+EEM       D   Y
Sbjct: 158 ERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAY 217

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDI-----------------QAYNCLIDGLC 272
            +F+ GLCK   + EA +  R +     + D                  +A N +I+ LC
Sbjct: 218 TSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLC 277

Query: 273 KSGRLEIALELF-------------------------RSLPRRVLV-------------A 294
           +SG L+ A + F                         + LP  VL+              
Sbjct: 278 RSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPP 337

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           ++ TYNIM+  LC   Q+D+A +L  +M    ++P+V+ +  L+ G  ++ K  +  +LL
Sbjct: 338 NLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLL 397

Query: 355 HKMKEKKVMPDASIVSMVVDLL 376
            +M ++ V PD+   + +++ L
Sbjct: 398 EEMSKEGVFPDSFTDASILNAL 419



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 128/252 (50%), Gaps = 2/252 (0%)

Query: 89  FNVIMDELCKNGKMDEASRLLD-LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
           + V+ + L   GK+    RL D L  Q+  + + FTY+  +D          A E F  M
Sbjct: 5   YTVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
           +  G   DD +Y+I++ G CK  E+++A  L  ++   G+K  V+TY+ +  G  +  +V
Sbjct: 65  QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRV 124

Query: 208 EHALKLFEEMQR-DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           + AL++F+ M        D  T+N+ + GLC    + EA  LF  +    CE ++ +Y+ 
Sbjct: 125 DDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYST 184

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           L+DGLCK+GRL+ A  L+  +  +  V D+V Y   + GLC   ++ +A D    M    
Sbjct: 185 LLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKG 244

Query: 327 VAPNVIIFVTLI 338
              + + F T+I
Sbjct: 245 SKADAVAFSTVI 256



 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 5/137 (3%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +   C P+  +Y  II  LC+ G    A A+F +M    + PD V Y+SL+ GL      
Sbjct: 471 VAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLAR---- 526

Query: 68  NEAKRLFFEMMDQGV-QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           N  + L  E++   + +P  V   +++D LCK GK ++A  +++ M       +AFTY  
Sbjct: 527 NGLEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYIN 586

Query: 127 LMDGFCLTGKINRAEEL 143
           ++ G    GK+++A +L
Sbjct: 587 VVRGLRKLGKVDKARQL 603


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/365 (34%), Positives = 192/365 (52%), Gaps = 2/365 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GVV   N VT++T +D  CKEG V +A  LF QM+   + P+  TY SL+ G C A   +
Sbjct: 300 GVVA--NVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLD 357

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  L  EM+ QG+ P+VVT+ V++D LCK GK+ EA  +L LM +  V+ N   Y+TL+
Sbjct: 358 DAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLI 417

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G  +     RA +L   M++ G + D   Y  LI G CK+++V+EA SL  +M   G++
Sbjct: 418 HGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLR 477

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  V Y T+   LF+  +   A+ L  ++       +  TY   IDGLCK G I EA+  
Sbjct: 478 PNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISH 537

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +  L  + ++QAY  LIDG CK G L  A+ L   +  + +  D V Y  +I G   
Sbjct: 538 FNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMK 597

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
              +  A  L   M E+ +  ++  +   I GF  +N   +   +L +M    + PD ++
Sbjct: 598 QANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTV 657

Query: 369 VSMVV 373
            + ++
Sbjct: 658 YNCLI 662



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/396 (33%), Positives = 196/396 (49%), Gaps = 35/396 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T+N +ID LCKEG + +A+ALF++MK    +PDVVTYNSLI G     D  E ++L
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257

Query: 74  -----------------------------------FFEMMDQGVQPSVVTFNVIMDELCK 98
                                              F EM  QGV  +VVTF+  +D  CK
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
            G + EA +L   M  R + PN FTY++L+DG C  G+++ A  L   M   G   + V+
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y ++++G CK  +V EA ++   M   G+K   + Y TL  G F  +  E AL L  +M+
Sbjct: 378 YTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMK 437

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  D S Y T I GLCK+  + EA  L   +       +   Y  ++D L K+G+  
Sbjct: 438 NKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKES 497

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A+ L   +       +VVTY  +I GLC  G + +A   F  M E  + PNV  +  LI
Sbjct: 498 EAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALI 557

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            GF +I   +K + L+++M +K +  D  + + ++D
Sbjct: 558 DGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLID 593



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 187/354 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  + VTYN +I+   K G ++KA + F +MK + +  +VVT+++ +   C      EA 
Sbjct: 266 CAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAM 325

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +LF +M  +G+ P+  T+  ++D  CK G++D+A  LLD MV + + PN  TY+ ++DG 
Sbjct: 326 KLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGL 385

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+  A+ +   ME  G K +++ Y  LI+G+  N   E AL L  +M +KG++  V
Sbjct: 386 CKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDV 445

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y TL  GL +  +V+ A  L  +M    +  +T  Y T +D L K G   EAV L   
Sbjct: 446 SLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHK 505

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + ++  Y  LIDGLCK+G +  A+  F  +    L  +V  Y  +I G C  G 
Sbjct: 506 ILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGS 565

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++KA  L  +M +  ++ + +++ +LI G+++         L  KM E  +  D
Sbjct: 566 LNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLD 619



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 184/396 (46%), Gaps = 41/396 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V  +T++  L   G +D A     +++   + P+  T N ++  L         +RL
Sbjct: 134 PSVV--DTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRL 191

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F    D    P+V TFN+++D LCK G++ EA  L   M      P+  TY++L+DG+  
Sbjct: 192 F----DLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGK 247

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +   E+L   M   GC  D V+YN LIN + K   +E+A S + EM  +G+   VVT
Sbjct: 248 CGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVT 307

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           ++T      +   V+ A+KLF +M+   +  +  TY + +DG CK G + +A+ L   + 
Sbjct: 308 FSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMV 367

Query: 254 ILKCELDIQAYNCLIDGLCKSGRL-----------------------------------E 278
                 ++  Y  ++DGLCK G++                                   E
Sbjct: 368 HQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSE 427

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            AL+L   +  + +  DV  Y  +I GLC D ++D+A  L   M    + PN +I+ T++
Sbjct: 428 RALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIM 487

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
               +  K S+ + LLHK+ +    P+      ++D
Sbjct: 488 DALFKAGKESEAVALLHKILDSGFQPNVVTYCALID 523



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 150/311 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  ++DGLCKEG V +A  +   M+   +  + + Y +LIHG    N+   A  L
Sbjct: 373 PNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDL 432

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M ++G++  V  +  ++  LCK+ K+DEA  LL  M    +RPN   Y+T+MD    
Sbjct: 433 LNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFK 492

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK + A  L   +   G + + V+Y  LI+G CK   + EA+S + +M   G+ P V  
Sbjct: 493 AGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQA 552

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G  +I  +  A+ L  EM    ++ D   Y + IDG  K   + +A  L   + 
Sbjct: 553 YTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMI 612

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +LD+  Y C I G C    ++ A  +   +    +  D   YN +I      G M+
Sbjct: 613 ESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNME 672

Query: 314 KAHDLFLDMEE 324
           +A  L  +ME 
Sbjct: 673 EASSLQNEMES 683



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 108/210 (51%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G   +PNTV Y TI+D L K G   +A AL  ++      P+VVTY +LI GLC A   +
Sbjct: 473 GCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSIS 532

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA   F +M + G+ P+V  +  ++D  CK G +++A  L++ M+ + +  +   Y++L+
Sbjct: 533 EAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLI 592

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+     +  A  L   M   G + D   Y   I+G+C    ++EA  +  EM+  GI 
Sbjct: 593 DGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGIT 652

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           P    YN L     ++  +E A  L  EM+
Sbjct: 653 PDKTVYNCLIRKYQKLGNMEEASSLQNEME 682



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 88/172 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY  +IDGLCK G + +A + F +M+   ++P+V  Y +LI G C     N+A  
Sbjct: 512 QPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMH 571

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+D+G+    V +  ++D   K   + +A  L   M++  ++ + + Y+  + GFC
Sbjct: 572 LMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFC 631

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
               +  A  +   M   G   D   YN LI  Y K   +EEA SL  EM S
Sbjct: 632 NMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMES 683



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 2/147 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   Y  +IDG CK G ++KA  L  +M  + ++ D V Y SLI G     +  +A  L
Sbjct: 548 PNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFAL 607

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M++ G+Q  +  +   +   C    M EA  +L  M+   + P+   Y+ L+  +  
Sbjct: 608 KTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQK 667

Query: 134 TGKINRAEELFGSMESM--GCKHDDVS 158
            G +  A  L   MES+   C  DD +
Sbjct: 668 LGNMEEASSLQNEMESVLSSCTEDDTA 694


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 112/325 (34%), Positives = 182/325 (56%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN ++YN +I+GLC+EG + +   +  +M      PD VT+N+LI+G C+  ++++A  L
Sbjct: 271 PNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVL 330

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+  G+ P+VVT+  +++ +CK G ++ A   LD M  R + PN  TY+TL+DGF  
Sbjct: 331 HAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQ 390

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G + +A ++   M   G     ++YN LING+C    +E+A  L +EM+ +G  P VV+
Sbjct: 391 QGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVS 450

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+T+  G     ++E A +L  EM    ++ D +TY++ I GLCK   + E  +LF+ + 
Sbjct: 451 YSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEML 510

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            L    D   Y  LI+  C  G L+ AL L   + ++    D+VTYN++I+G     +  
Sbjct: 511 SLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTK 570

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLI 338
           +A  L L +      PN I + TLI
Sbjct: 571 EAKRLLLKLLYEESVPNEITYNTLI 595



 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 194/362 (53%), Gaps = 1/362 (0%)

Query: 14  PNTVTYNTIIDGLCK-EGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           P  ++YN I+D + + +  V  A+ +F +M    ++P+V TYN LI G C A +      
Sbjct: 165 PGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLF 224

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM   G  P+VVT+N I+D  CK  K+ EA +LL LM  + + PN  +Y+ +++G C
Sbjct: 225 FFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLC 284

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++    E+   M       D V++N LINGYC      +AL L+ EMV  G+ P VV
Sbjct: 285 REGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVV 344

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL   + +   +  A++  ++M+   +  +  TY T IDG  + G++ +A ++ + +
Sbjct: 345 TYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEM 404

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   I  YN LI+G C  GR+E A  L + +  R  + DVV+Y+ +I G C + ++
Sbjct: 405 VENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQEL 464

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +KA  L ++M    ++P+V  + +LI G  +  +  +V +L  +M    + PD    + +
Sbjct: 465 EKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSL 524

Query: 373 VD 374
           ++
Sbjct: 525 IN 526



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/380 (31%), Positives = 197/380 (51%), Gaps = 9/380 (2%)

Query: 4   GNGEIGVV---------CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTY 54
           GN E+G+          C PN VTYNTIID  CK   + +A  L   M  + +NP++++Y
Sbjct: 217 GNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISY 276

Query: 55  NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
           N +I+GLC      E   +  EM  +   P  VTFN +++  C  G   +A  L   MV+
Sbjct: 277 NVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVK 336

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
             + PN  TY+TL++  C  G +NRA E    M   G   +  +Y  LI+G+ +   +++
Sbjct: 337 NGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQ 396

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           A  + +EMV  G  PT++TYN L  G   + ++E A  L +EM       D  +Y+T I 
Sbjct: 397 AYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIIS 456

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
           G C+N  + +A +L   +       D+  Y+ LI GLCK  RL    +LF+ +    L  
Sbjct: 457 GFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPP 516

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           D VTY  +I+  C +G +DKA  L  +M +   +P+++ +  LI+GF + ++  +   LL
Sbjct: 517 DEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL 576

Query: 355 HKMKEKKVMPDASIVSMVVD 374
            K+  ++ +P+    + ++D
Sbjct: 577 LKLLYEESVPNEITYNTLID 596



 Score =  165 bits (417), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 150/295 (50%), Gaps = 1/295 (0%)

Query: 81  GVQPSVVTFNVIMDELCKNGK-MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
           G  P V+++N I+D + +  + +  A  +   MV+  V PN +TY+ L+ GFC  G +  
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
               FG ME  GC  + V+YN +I+ YCK +++ EA  L R M  KG+ P +++YN +  
Sbjct: 222 GLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVIN 281

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           GL    Q++   ++ EEM +     D  T+NT I+G C  G   +A+ L   +       
Sbjct: 282 GLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSP 341

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           ++  Y  LI+ +CK+G L  A+E    +  R L  +  TY  +I G    G + +A+ + 
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIM 401

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +M EN   P +I +  LI+G   + +      LL +M E+  +PD    S ++ 
Sbjct: 402 KEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIIS 456



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 132/239 (55%), Gaps = 1/239 (0%)

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKE-VEEALSLYREMVSKGIKPTVVTYN 195
           IN+A  +    +S G     +SYN +++   + K+ V+ A  +++EMV  G+ P V TYN
Sbjct: 148 INKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYN 207

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
            L  G      +E  L  F EM+R+    +  TYNT ID  CK   I EA +L R + + 
Sbjct: 208 ILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALK 267

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
               ++ +YN +I+GLC+ G+++   E+   + +R  V D VT+N +I+G CN G   +A
Sbjct: 268 GLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQA 327

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             L  +M +N ++PNV+ + TLI+   +    ++ +E L +M+++ + P+    + ++D
Sbjct: 328 LVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLID 386



 Score =  130 bits (328), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 113/204 (55%), Gaps = 15/204 (7%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY+++I GLCK+  + +   LF +M    + PD VTY SLI+  C   D ++A RL
Sbjct: 481 PDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRL 540

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD---- 129
             EM+ +G  P +VT+NV+++   K  +  EA RLL  ++  +  PN  TY+TL+D    
Sbjct: 541 HDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNN 600

Query: 130 -----------GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
                      GFC+ G +N A+ +  SM   G K ++  YN++I+G+ K   +E+A +L
Sbjct: 601 LEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNL 660

Query: 179 YREMVSKGIKPTVVTYNTLFLGLF 202
           Y+EM+  G  P  VT   L   L+
Sbjct: 661 YKEMLHSGFAPHSVTIMALAKSLY 684


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 192/364 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+T TYNT+I GLC  G  D A A+   M      PDVVTY  L+   C  + + +A +
Sbjct: 149 EPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVK 208

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM D+G  P +VT+NV+++ +C+ G++D+A   L  +      PN  +Y+ ++ G C
Sbjct: 209 LLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLC 268

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +   AE+L   M   G   + V++N+LI+  C+   VE A+ +  ++   G  P  +
Sbjct: 269 TAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSL 328

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YN +     +  +++ A+   E M       D  +YNT +  LC+ G +  AVEL   L
Sbjct: 329 SYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL 388

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C   + +YN +IDGL K+G+ E ALEL   +  + L  D++TY+ +  GLC +G++
Sbjct: 389 KDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRI 448

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A   F  +++  + PN +++  ++ G  +       I+L   M     MP+ S  +++
Sbjct: 449 EEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTIL 508

Query: 373 VDLL 376
           ++ L
Sbjct: 509 IEGL 512



 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 183/338 (54%), Gaps = 3/338 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYN +++G+C+EG VD A      +      P+ V+YN ++ GLC A  W +A+
Sbjct: 218 CAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 277

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  EM  +G  P+VVTFN+++  LC+ G ++ A  +LD + +    PN+ +Y+ ++  F
Sbjct: 278 KLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAF 337

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++RA      M S GC  D VSYN L+   C+  EV+ A+ L  ++  KG  P +
Sbjct: 338 CKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVL 397

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++YNT+  GL +  + E AL+L  EM    +  D  TY+T   GLC+ G I EA++ F  
Sbjct: 398 ISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCK 457

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +    +   YN ++ GLCK      A++LF  +     + +  TY I+I GL  +G 
Sbjct: 458 VQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGL 517

Query: 312 MDKAHDLFLDMEENAVAPNVII---FVTLIHGFVRINK 346
           + +A ++  ++    V    ++    + L+ G +  +K
Sbjct: 518 VKEAREMMAELCSRGVVSKTLVNKGAIRLLDGTMHTSK 555



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 172/331 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY  +++  CK     +A  L  +M+ +   PD+VTYN +++G+C     ++A 
Sbjct: 183 CVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAM 242

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                +   G +P+ V++N+++  LC   + ++A +L+  M ++   PN  T++ L+   
Sbjct: 243 EFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFL 302

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A E+   +   GC  + +SYN +++ +CK K+++ A++    MVS G  P +
Sbjct: 303 CRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDI 362

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+YNTL   L    +V+ A++L  +++         +YNT IDGL K G   EA+EL   
Sbjct: 363 VSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNE 422

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DI  Y+ +  GLC+ GR+E A++ F  +    +  + V YN ++ GLC    
Sbjct: 423 MVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRA 482

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
              A DLF  M  N   PN   +  LI G  
Sbjct: 483 THSAIDLFTYMVSNGCMPNESTYTILIEGLA 513



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 117/272 (43%), Gaps = 12/272 (4%)

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA--EELFGSMESMGCKHDDVS--YNILIN 164
           L+L     V PNA  + +      L   + R   EE    +ESM       +     LI 
Sbjct: 39  LNLAYAGAVAPNAVPHRSAASNDRLRVLVRRGDLEEAIRLVESMAGLEPSAAGPCAALIK 98

Query: 165 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAA 224
             C +    EA       V    +P V++YN +  G     Q+++A +L   M  +    
Sbjct: 99  KLCASGRTAEA-----RRVLASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPME---P 150

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           DT TYNT I GLC  G    A+ +   +    C  D+  Y  L++  CK    + A++L 
Sbjct: 151 DTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLL 210

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
             +  +    D+VTYN++++G+C +G++D A +    +      PN + +  ++ G    
Sbjct: 211 DEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTA 270

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +     +L+ +M  K   P+    +M++  L
Sbjct: 271 ERWEDAEKLMAEMSRKGRPPNVVTFNMLISFL 302


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 205/372 (55%), Gaps = 6/372 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDW 67
           G+ C P+ +T N +I+G C+   +DKA  LF +M K   + P+  TY ++I   C  +  
Sbjct: 63  GIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRL 122

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDVRPNAFTYST 126
           ++A++L  E         V+    +    CK  ++DEA +LL D++ ++  +P+   ++ 
Sbjct: 123 DQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNV 180

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ GFC  G++  A E+  ++ SMGC  + V+Y  LI+G+CK+  + EAL L++ + S+ 
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240

Query: 187 --IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
              +P VVT+N L  GL +  ++EHA +L ++M+  D+ ADT TY T +DGLCK G   E
Sbjct: 241 HHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
              +F  +    C   +  Y  L+   CK+G L+ A ++ RS+  + +  DV TY +++ 
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLE 360

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           GL  +G++  A + F  +      P  +++  L+ G  +     + ++   +M ++++ P
Sbjct: 361 GLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAP 420

Query: 365 DASIVSMVVDLL 376
           D +   ++V++L
Sbjct: 421 DPATCKLLVEML 432



 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 94/266 (35%), Positives = 142/266 (53%), Gaps = 2/266 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V +N II G CK G V +A  +   +      P+ VTY +LI G C + + +EA +
Sbjct: 172 KPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQ 231

Query: 73  LF--FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           LF      D   +P+VVTFN ++  LCK  +++ A  L+  M  RD+R + FTY+TLMDG
Sbjct: 232 LFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDG 291

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  G+ +    +F  M   GC    V+Y  L++ +CK   +++A  + R MV+KGI P 
Sbjct: 292 LCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPD 351

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V TY  L  GLFE  +V  A + FE++ R+        Y+  + G CK   + EAV+ + 
Sbjct: 352 VTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYV 411

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGR 276
            +   +   D      L++ LCK GR
Sbjct: 412 EMLDRRLAPDPATCKLLVEMLCKRGR 437



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 153/305 (50%), Gaps = 3/305 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNEA 70
           C  + +   ++  G CK   VD+A  L L M + ++  PD+V +N +IHG C A    EA
Sbjct: 135 CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREA 194

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD--VRPNAFTYSTLM 128
             +   ++  G  P+ VT+  ++D  CK+G + EA +L  ++  RD    PN  T++ L+
Sbjct: 195 YEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALI 254

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C   ++  A EL   M++   + D  +Y  L++G CK     E   ++ EM+ +G  
Sbjct: 255 SGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCN 314

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P+VVTY TL     +   ++ A ++   M    +  D +TY   ++GL +NG +  A E 
Sbjct: 315 PSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEF 374

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +   +C      Y+ L+ G CK+  ++ A++ +  +  R L  D  T  +++  LC 
Sbjct: 375 FEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCK 434

Query: 309 DGQMD 313
            G+ D
Sbjct: 435 RGRTD 439



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 176/365 (48%), Gaps = 44/365 (12%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P+  T++ LI GLC A    EA   + +M+++   P++   N+++  LC+ G MD+A   
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQA--- 57

Query: 109 LDLMVQRDVR--PNAFTYSTLMDGFCLTGKINRAEELFGSM------------------- 147
             + + R ++  P+  T + L++GFC    +++A ELF  M                   
Sbjct: 58  --MAIFRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115

Query: 148 ---------------ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV-SKGIKPTV 191
                          ES  C  D ++   +  G+CK + V+EA  L  +MV  K  KP +
Sbjct: 116 YCKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V +N +  G  +  +V  A ++ E +       +  TY T IDG CK+G + EA++LF+ 
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235

Query: 252 LGIL--KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           L       E ++  +N LI GLCK+ RLE A EL + +  R L AD  TY  ++ GLC  
Sbjct: 236 LSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQ 295

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G+  +   +F +M      P+V+ + TL+H   +        +++  M  K + PD +  
Sbjct: 296 GRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTY 355

Query: 370 SMVVD 374
           +++++
Sbjct: 356 TVLLE 360



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 126/235 (53%), Gaps = 2/235 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALF--LQMKGENINPDVVTYNSLIHGLCHAN 65
           + + C PN VTY T+IDG CK G + +A  LF  L  +  +  P+VVT+N+LI GLC A+
Sbjct: 202 VSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKAD 261

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
               A  L  +M  + ++    T+  +MD LCK G+  E SR+ + M++    P+  TY+
Sbjct: 262 RLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYT 321

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+   C  G +  A+++  SM + G   D  +Y +L+ G  +N +V  A   + +++ +
Sbjct: 322 TLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRE 381

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
              P  V Y+ L  G  +   V+ A+K + EM    +A D +T    ++ LCK G
Sbjct: 382 RCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRG 436


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 193/366 (52%), Gaps = 1/366 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+  TY+T+I+ LC  G +++AK +  QM      PD  T+N+LI  LC  N   EA 
Sbjct: 332 CEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEAL 391

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  E+  +G+ P+V TFN++++ LCK G    A RL + M      P+  TY+ L+D  
Sbjct: 392 DLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNL 451

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +GK+ +A +L   ME  GC    V+YN +I+G CK + +EEA  ++ +M   GI    
Sbjct: 452 CSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNA 511

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +T+NTL  GL    +++ A +L ++M  + +  +  TYN+ +   CK G I +A ++ +T
Sbjct: 512 ITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQT 571

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     E+D+  Y  LI+GLCK+ R + AL+L R +  + +      YN +I  L     
Sbjct: 572 MTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNN 631

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK-VIELLHKMKEKKVMPDASIVS 370
              A  LF +M E    P+   +  +  G  R   P K   + L +M +   +P+ S   
Sbjct: 632 GRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFR 691

Query: 371 MVVDLL 376
           M+ + L
Sbjct: 692 MLAEGL 697



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 186/344 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+ T+++G  +EG ++ A  L  +M     +P  VT N LI+G C      +A   
Sbjct: 229 PDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGY 288

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             + +  G +P  VTF+  ++ LC+NG +D A ++L LM+Q    P+ +TYST+++  C 
Sbjct: 289 IQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCN 348

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A+ +   M   GC  D  ++N LI   C   ++EEAL L RE+  KG+ P V T
Sbjct: 349 NGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYT 408

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L   L ++     A++LFEEM+      D  TYN  ID LC +G + +A++L + + 
Sbjct: 409 FNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEME 468

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +  C      YN +IDGLCK  R+E A E+F  +    +  + +T+N +I GLCN  ++D
Sbjct: 469 VSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERID 528

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            A +L   M    + PN + + +++  + +    SK  ++L  M
Sbjct: 529 DAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTM 572



 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 188/365 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P +VT N +I+G CK G V  A     Q   +   PD VT+++ ++GLC     + A 
Sbjct: 262 CSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHAL 321

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++   M+ +G +P V T++ +++ LC NG+++EA  +++ MV     P+  T++TL+   
Sbjct: 322 KVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVAL 381

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++  A +L   +   G   +  ++NILIN  CK  +   A+ L+ EM S G  P  
Sbjct: 382 CTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDE 441

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN L   L    ++  AL L +EM+       T TYNT IDGLCK   I EA E+F  
Sbjct: 442 VTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQ 501

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +     +   +N LIDGLC + R++ A EL   +    L  + VTYN ++   C  G 
Sbjct: 502 MDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGN 561

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + KA D+   M  N    +V+ + TLI+G  +  +    ++LL  M+ K + P     + 
Sbjct: 562 ISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNP 621

Query: 372 VVDLL 376
           V+  L
Sbjct: 622 VIQSL 626



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 190/366 (51%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           EI    +P+ VT++T ++GLC+ G VD A  +   M  E   PDV TY+++I+ LC+  +
Sbjct: 292 EIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGE 351

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             EAK +  +M+D G  P   TFN ++  LC   +++EA  L   +  + + PN +T++ 
Sbjct: 352 LEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNI 411

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L++  C  G  + A  LF  M+S GC  D+V+YNILI+  C + ++ +AL L +EM   G
Sbjct: 412 LINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSG 471

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
              + VTYNT+  GL +  ++E A ++F++M    +  +  T+NT IDGLC    I +A 
Sbjct: 472 CPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAA 531

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           EL   +     + +   YN ++   CK G +  A ++ +++       DVVTY  +I+GL
Sbjct: 532 ELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGL 591

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C   +   A  L   M    + P    +  +I    R N     + L  +M E    PDA
Sbjct: 592 CKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDA 651

Query: 367 SIVSMV 372
               +V
Sbjct: 652 FTYKIV 657



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 113/319 (35%), Positives = 169/319 (52%), Gaps = 2/319 (0%)

Query: 40  LQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKN 99
           L M G   N +V  YN L+  L   +     +  + EM  QG++P VVTFN ++D LC+ 
Sbjct: 152 LDMFGVQANTEV--YNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRA 209

Query: 100 GKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
            +   A  +L+ M   DV P+  T++TLM+GF   G I  A  L   M  MGC    V+ 
Sbjct: 210 RQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTV 269

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           N+LINGYCK   V +AL   ++ ++ G +P  VT++T   GL +   V+HALK+   M +
Sbjct: 270 NVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQ 329

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
           +    D  TY+T I+ LC NG + EA  +   +    C  D   +N LI  LC   +LE 
Sbjct: 330 EGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEE 389

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           AL+L R L  + L  +V T+NI+I+ LC  G    A  LF +M+ +   P+ + +  LI 
Sbjct: 390 ALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILID 449

Query: 340 GFVRINKPSKVIELLHKMK 358
                 K +K ++LL +M+
Sbjct: 450 NLCSSGKLAKALDLLKEME 468



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 169/364 (46%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   Y  II  L   G  D  K L  +M+ E     +    S I        +++A  L
Sbjct: 88  PSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDL 147

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
               +D  GVQ +   +N ++  L +  K+         M  + + P+  T++T++D  C
Sbjct: 148 VSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALC 207

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +   A  +   M S     D+ ++  L+ G+ +   +E AL L   M   G  PT V
Sbjct: 208 RARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSV 267

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T N L  G  ++ +V  AL   ++   D    D  T++TF++GLC+NG++  A+++   +
Sbjct: 268 TVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLM 327

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               CE D+  Y+ +I+ LC +G LE A  +   +     + D  T+N +I  LC + Q+
Sbjct: 328 LQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQL 387

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A DL  ++    ++PNV  F  LI+   ++  P   + L  +MK     PD    +++
Sbjct: 388 EEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNIL 447

Query: 373 VDLL 376
           +D L
Sbjct: 448 IDNL 451


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 205/372 (55%), Gaps = 6/372 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDW 67
           G+ C P+ +T N +I+G C+   +DKA  LF +M K   + P+  TY ++I   C  +  
Sbjct: 63  GIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRL 122

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDVRPNAFTYST 126
           ++A++L  E         V+    +    CK  ++DEA +LL D++ ++  +P+   ++ 
Sbjct: 123 DQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNV 180

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ GFC  G++  A E+  ++ SMGC  + V+Y  LI+G+CK+  + EAL L++ + S+ 
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240

Query: 187 --IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
              +P VVT+N L  GL +  ++EHA +L ++M+  D+ ADT TY T +DGLCK G   E
Sbjct: 241 HHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
              +F  +    C   +  Y  L+   CK+G L+ A ++ RS+  + +  DV TY +++ 
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLE 360

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           GL  +G++  A + F  +      P  +++  L+ G  +     + ++   +M ++++ P
Sbjct: 361 GLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAP 420

Query: 365 DASIVSMVVDLL 376
           D +   ++V++L
Sbjct: 421 DPATCKLLVEML 432



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 94/266 (35%), Positives = 142/266 (53%), Gaps = 2/266 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V +N II G CK G V +A  +   +      P+ VTY +LI G C + + +EA +
Sbjct: 172 KPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQ 231

Query: 73  LF--FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           LF      D   +P+VVTFN ++  LCK  +++ A  L+  M  RD+R + FTY+TLMDG
Sbjct: 232 LFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDG 291

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  G+ +    +F  M   GC    V+Y  L++ +CK   +++A  + R MV+KGI P 
Sbjct: 292 LCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPD 351

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V TY  L  GLFE  +V  A + FE++ R+        Y+  + G CK   + EAV+ + 
Sbjct: 352 VTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYV 411

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGR 276
            +   +   D      L++ LCK GR
Sbjct: 412 EMLDRRLAPDPATCKLLVEMLCKRGR 437



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 177/365 (48%), Gaps = 44/365 (12%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P+  T++ LI GLC A    EA   + +M+++   P++   N+++  LC+ GKMD+A   
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQA--- 57

Query: 109 LDLMVQRDVR--PNAFTYSTLMDGFCLTGKINRAEELFGSM------------------- 147
             + + R ++  P+  T + L++GFC    +++A ELF  M                   
Sbjct: 58  --MAIFRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115

Query: 148 ---------------ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV-SKGIKPTV 191
                          ES  C  D ++   +  G+CK + V+EA  L  +MV  K  KP +
Sbjct: 116 YCKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V +N +  G  +  +V  A ++ E +       +  TY T IDG CK+G + EA++LF+ 
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235

Query: 252 LGIL--KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           L       E ++  +N LI GLCK+ RLE A EL + +  R L AD  TY  ++ GLC  
Sbjct: 236 LSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQ 295

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G+  +   +F +M      P+V+ + TL+H   +        +++  M  K + PD +  
Sbjct: 296 GRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTY 355

Query: 370 SMVVD 374
           +++++
Sbjct: 356 TVLLE 360



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 153/305 (50%), Gaps = 3/305 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNEA 70
           C  + +   ++  G CK   VD+A  L L M + ++  PD+V +N +IHG C A    EA
Sbjct: 135 CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREA 194

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD--VRPNAFTYSTLM 128
             +   ++  G  P+ VT+  ++D  CK+G + EA +L  ++  RD    PN  T++ L+
Sbjct: 195 YEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALI 254

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C   ++  A EL   M++   + D  +Y  L++G CK     E   ++ EM+ +G  
Sbjct: 255 SGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCN 314

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P+VVTY TL     +   ++ A ++   M    +  D +TY   ++GL +NG +  A E 
Sbjct: 315 PSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEF 374

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +   +C      Y+ L+ G CK+  ++ A++ +  +  R L  D  T  +++  LC 
Sbjct: 375 FEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCK 434

Query: 309 DGQMD 313
            G+ D
Sbjct: 435 RGRTD 439



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 126/235 (53%), Gaps = 2/235 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALF--LQMKGENINPDVVTYNSLIHGLCHAN 65
           + + C PN VTY T+IDG CK G + +A  LF  L  +  +  P+VVT+N+LI GLC A+
Sbjct: 202 VSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKAD 261

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
               A  L  +M  + ++    T+  +MD LCK G+  E SR+ + M++    P+  TY+
Sbjct: 262 RLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYT 321

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+   C  G +  A+++  SM + G   D  +Y +L+ G  +N +V  A   + +++ +
Sbjct: 322 TLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRE 381

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
              P  V Y+ L  G  +   V+ A+K + EM    +A D +T    ++ LCK G
Sbjct: 382 RCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRG 436


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 194/398 (48%), Gaps = 35/398 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N V+Y  +I G C+   VD+A  LF QM  +N  P V TY  +I  LC      EA 
Sbjct: 270 CLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEAL 329

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F EM ++  QP+V T+ V++  LC++   D+A ++L+ M+++ + P+  TY+ L+DG+
Sbjct: 330 NMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGY 389

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G    A E+   MES  C  +  +YN LI G+C+ K + +A+SL  +M+ + ++P V
Sbjct: 390 CKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNV 449

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN L  G  +   +  A KL   M    +  D  TY+ FID LCK G + EA  LF +
Sbjct: 450 VTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFES 509

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC---- 307
           L     + +   Y+ LIDG CK G++     L   +     V + +TYN +I G C    
Sbjct: 510 LKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKN 569

Query: 308 -------------------------------NDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
                                           D + D+AHD+F  M      P+V I+  
Sbjct: 570 FKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTA 629

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            IH +    +      L+ KM  K +MPD  + ++ +D
Sbjct: 630 FIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFID 667



 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 175/348 (50%), Gaps = 3/348 (0%)

Query: 3   NGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC 62
           NG  E G++  P+ VTYN +IDG CK+G    A  +   M+  N +P+  TYN LI G C
Sbjct: 368 NGMLEKGLI--PSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFC 425

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
              + ++A  L  +M+++ +QP+VVT+N+++   CK G +  A +LL LM +  + P+ +
Sbjct: 426 RGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEW 485

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TYS  +D  C  G +  A  LF S++  G K ++V Y+ LI+GYCK  +V +   L  +M
Sbjct: 486 TYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKM 545

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
           +S G  P  +TYN+L  G  +    + A  L + M + D+     TY   ID L K+   
Sbjct: 546 LSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEF 605

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            +A ++F  +       D+  Y   I   C  GRL+ A  L   +  + ++ D + Y + 
Sbjct: 606 DQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLF 665

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
           I      G +D A  +   M E    P+   +  LI       KP +V
Sbjct: 666 IDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNA-KPKEV 712



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 182/417 (43%), Gaps = 64/417 (15%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TYN +I G C+   + KA +L  +M    + P+VVTYN LIHG C   D   A 
Sbjct: 410 CSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAY 469

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M + G+ P   T++V +D LCK G ++EA  L + + ++ ++ N   YSTL+DG+
Sbjct: 470 KLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGY 529

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK++    L   M S GC  + ++YN LI+GYCK K  +EA  L   M+ + I+P  
Sbjct: 530 CKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAA 589

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF-- 249
            TY  L   L +  + + A  +F++M       D   Y  FI   C +G + +A  L   
Sbjct: 590 DTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICK 649

Query: 250 ---------------------------RTLGILK------CELDIQAYNCLIDGLCKSGR 276
                                         GILK      CE     Y+CLI  L  +  
Sbjct: 650 MNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKP 709

Query: 277 LEI-----------------------------ALELFRSLPRRVLVADVVTYNIMIHGLC 307
            E+                              L+LF  +       +  TY   I GLC
Sbjct: 710 KEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLC 769

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
             G ++ AH LF  M+E   +PN  I+ +L+    ++    + I  L  M E + +P
Sbjct: 770 KVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLP 826



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 184/361 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T NT+++G CK G V +A+    ++    ++ D  TY SLI G C   + + A  +
Sbjct: 202 PNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAI 261

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M ++G   + V++  ++   C+  ++DEA +L   M + +  P   TY+ ++   C 
Sbjct: 262 FLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQ 321

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A  +F  M    C+ +  +Y +LI   C++   ++A  +   M+ KG+ P+VVT
Sbjct: 322 LGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVT 381

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +      AL++   M+ ++ + +  TYN  I G C+   I +A+ L   + 
Sbjct: 382 YNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKML 441

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K + ++  YN LI G CK G L  A +L   +    LV D  TY++ I  LC  G ++
Sbjct: 442 ERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVE 501

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  LF  ++E  +  N +I+ TLI G+ ++ K S    LL KM     +P++   + ++
Sbjct: 502 EARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLI 561

Query: 374 D 374
           D
Sbjct: 562 D 562



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 167/356 (46%), Gaps = 35/356 (9%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           YN L+  L      +E K ++ EM+D  V P++ T N +++  CK G + EA   +  +V
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
           Q  +  + FTY++L+ G+C    ++ A  +F SM + GC  ++VSY  LI+G+C+ + V+
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR-------------- 219
           EAL L+ +M      PTV TY  +   L ++ +   AL +F+EM                
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351

Query: 220 ---------DDVA------------ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
                    DD                  TYN  IDG CK G    A+E+   +    C 
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCS 411

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            + + YN LI G C+   +  A+ L   +  R L  +VVTYNI+IHG C +G +  A+ L
Sbjct: 412 PNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKL 471

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
              M E+ + P+   +   I    +     +   L   +KEK +  +  I S ++D
Sbjct: 472 LSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLID 527



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 163/393 (41%), Gaps = 64/393 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N V Y+T+IDG CK G V   + L  +M      P+ +TYNSLI G C   ++ EA+ 
Sbjct: 516 KANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARL 575

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+ + ++P+  T+ +++D L K+ + D+A  + D M+     P+ F Y+  +  +C
Sbjct: 576 LVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYC 635

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  AE L   M + G   D + Y + I+ Y +   ++ A  + + M   G +P+  
Sbjct: 636 SHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYY 695

Query: 193 TYNTL-----------------------------FLGLFEIHQVEHALKLFEEMQRDDVA 223
           TY+ L                             F   +     E  L LF +M     A
Sbjct: 696 TYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCA 755

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVELFRTL-------------GILKCELDIQAY------ 264
            + +TY  FI GLCK G +  A  LF  +              +L C   +  Y      
Sbjct: 756 PNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRW 815

Query: 265 --------------NC--LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
                         +C  L+ GL   G  E A  +F S  +     D + + ++I GL  
Sbjct: 816 LDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLK 875

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            G  DK  DLF  ME      +   +  LI GF
Sbjct: 876 KGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 96/197 (48%)

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           S+ R + +   K T+  YN L + L     ++    ++ EM  D V  +  T NT ++G 
Sbjct: 155 SMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGY 214

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           CK G +VEA      +      LD   Y  LI G C++  ++ A  +F S+P +  + + 
Sbjct: 215 CKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNE 274

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           V+Y  +IHG C   ++D+A  LF  M E+   P V  +  +I    ++ + ++ + +  +
Sbjct: 275 VSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKE 334

Query: 357 MKEKKVMPDASIVSMVV 373
           M EK   P+    ++++
Sbjct: 335 MTEKHCQPNVHTYTVLI 351



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 82/162 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TY   I GLCK G ++ A  LF  MK +  +P+   YNSL+   C    + EA 
Sbjct: 754 CAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAI 813

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R    M++    P + +  +++  L   G  ++A R+    +Q +   +   +  L+DG 
Sbjct: 814 RWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGL 873

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
              G  ++  +LFG ME+ GC+    +Y++LI G+   +E++
Sbjct: 874 LKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQEID 915



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 80/171 (46%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           LF +M      P+  TY   I GLC       A RLF  M ++G  P+   +N ++   C
Sbjct: 745 LFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSC 804

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           + G   EA R LD+M++    P+  +   L+ G    G   +A+ +F S       +D++
Sbjct: 805 QLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEM 864

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 208
            + +LI+G  K    ++   L+  M ++G +    TY+ L  G   I +++
Sbjct: 865 VWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQEID 915


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 194/360 (53%), Gaps = 3/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    YN +I+  CKEG +  AK +F +++   + P  V++N+LI+GLC + + +E  RL
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M +  + P V T++V++  LCK G++D A +L D M QR +RPN  T++ L+DG C 
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCR 340

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           + +I+ A   +  M +MG K D V YN L+NG CK  +V +A  L  EM   G+KP  +T
Sbjct: 341 SRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKIT 400

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G  +   +E A+++ + M  + V  D   +   I G C++G + +A    R + 
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D   Y  +IDG CK G +++  +L + +        V+TYN++++GLC  GQM 
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMK 520

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A+ L   M    V P+ I +  L+ G     K  K  +LL    EK ++ D +  + +V
Sbjct: 521 NANMLLEAMLNLGVTPDDITYNILLEGHC---KNGKAEDLLKLRNEKGLIVDYAYYTSLV 577



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 179/329 (54%), Gaps = 3/329 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P TV++NT+I+GLCK   +D+   L   M+   I PDV TY+ LIHGLC     + A++
Sbjct: 255 RPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQ 314

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  +G++P+ +TF  ++D  C++ ++D A      M+   V+P+   Y+TL++G C
Sbjct: 315 LFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLC 374

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +N+A +L   M  +G K D ++Y  LI+GYCK  ++E A+ + + M  +G+    V
Sbjct: 375 KVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNV 434

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            +  L  G     +V  A +   EM    +  D +TY   IDG CK G +    +L + +
Sbjct: 435 AFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM 494

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            I   +  +  YN L++GLCK G+++ A  L  ++    +  D +TYNI++ G C +G  
Sbjct: 495 QINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG-- 552

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            KA DL     E  +  +   + +L+  +
Sbjct: 553 -KAEDLLKLRNEKGLIVDYAYYTSLVSEY 580



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 169/340 (49%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           ++ ++      GFV  A   F  ++  N          L+  + ++N        + E++
Sbjct: 156 FDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEIL 215

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           + G  P V  +N+++++ CK G + +A  + + + +R +RP   +++TL++G C +  ++
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
               L  +ME      D  +Y++LI+G CK   ++ A  L+ EM  +G++P  +T+  L 
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            G     +++ A+  + +M    V  D   YNT ++GLCK G + +A +L   + ++  +
Sbjct: 336 DGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMK 395

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            D   Y  LIDG CK G LE A+E+ + +    +V D V +  +I G C DG++  A   
Sbjct: 396 PDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERT 455

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
             +M E  + P+   +  +I G+ +        +LL +M+
Sbjct: 456 LREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQ 495



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 132/256 (51%)

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           P    Y+ L++ FC  G I  A+ +F  +   G +   VS+N LING CK++ ++E   L
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
            + M    I P V TY+ L  GL +  +++ A +LF+EMQ+  +  +  T+   IDG C+
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCR 340

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           +  I  A+  +  +  +  + D+  YN L++GLCK G +  A +L   +    +  D +T
Sbjct: 341 SRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKIT 400

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y  +I G C +G ++ A ++   M E  V  + + F  LI GF R  +       L +M 
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460

Query: 359 EKKVMPDASIVSMVVD 374
           E  + PD +  +MV+D
Sbjct: 461 EAGMKPDDATYTMVID 476



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 151/324 (46%), Gaps = 11/324 (3%)

Query: 51  VVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD 110
           + T+       C   ++  A ++F E        S++ F V      + GK   AS    
Sbjct: 94  IPTFRHTSQSYCAMANFLSAHQMFQECQ------SIIRFLV-----SRKGKDSAASVFAA 142

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
           ++     R + F +  LM  +  +G ++ A + F  + +   +        L++    + 
Sbjct: 143 ILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSN 202

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
                 + Y E++  G  P V  YN L     +   +  A  +F E+++  +   T ++N
Sbjct: 203 SPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFN 262

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           T I+GLCK+  + E   L +T+   +   D+  Y+ LI GLCK GRL++A +LF  + +R
Sbjct: 263 TLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR 322

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
            L  + +T+  +I G C   ++D A + +  M    V P+++++ TL++G  ++   +K 
Sbjct: 323 GLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKA 382

Query: 351 IELLHKMKEKKVMPDASIVSMVVD 374
            +L+ +M+   + PD    + ++D
Sbjct: 383 RKLVDEMRMVGMKPDKITYTTLID 406


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 190/352 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+   Y TIIDG+CKE  ++ A+ +  +M    ++P+VV YN+L+ GLC A+ W EA+
Sbjct: 283 CAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAE 342

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM D+      VTFN+++D LC+NG +D    +L+ M++    P+  TY+T+++GF
Sbjct: 343 GLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGF 402

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I+ A  L  SM + GC+ + VSY I++ G C  +   +A  L  +M+ +G  P  
Sbjct: 403 CKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNP 462

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NTL   L +   VE A++L ++M  +  + D  +Y+T IDGL K G   EA+EL   
Sbjct: 463 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNV 522

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       +   Y+ +   L   GR+   +++F ++    + +D V YN +I  LC  G+
Sbjct: 523 MVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGE 582

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            D+A +    M  +   PN   +  LI G        +  E+L ++  K  +
Sbjct: 583 TDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKGAL 634



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 190/362 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VT++T+I  LC+ G  ++   +  QM      PDV  Y ++I G+C       A+
Sbjct: 248 CPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVAR 307

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   M   G+ P+VV +N ++  LC   + +EA  LL  M  +D   +  T++ L+D  
Sbjct: 308 GILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFL 367

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G ++R  E+   M   GC  D ++Y  +ING+CK   ++EA+ L R M + G +P  
Sbjct: 368 CQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNT 427

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+Y  +  GL    +   A +L  +M +     +  T+NT I+ LCK G + +A+EL + 
Sbjct: 428 VSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 487

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +  C  D+ +Y+ +IDGL K+G  + ALEL   + ++ +  + + Y+ +   L  +G+
Sbjct: 488 MLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGR 547

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           ++K   +F ++++  V  + +++  +I    +  +  + IE L  M     +P+ S  ++
Sbjct: 548 INKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTI 607

Query: 372 VV 373
           ++
Sbjct: 608 LI 609



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 180/358 (50%), Gaps = 1/358 (0%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           N ++  +C +G VD+A  L   +       PDVV+YN+++ GLC A  W   + L  EM+
Sbjct: 185 NLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMV 244

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
             G  P++VTF+ ++  LC+NG  +    +   M +    P+   Y+T++DG C   ++ 
Sbjct: 245 AAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLE 304

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A  +   M S G   + V YN L+ G C     EEA  L  EM  K      VT+N L 
Sbjct: 305 VARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILV 364

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
             L +   V+  +++ E+M       D  TY T I+G CK G I EAV L R++    C 
Sbjct: 365 DFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCR 424

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            +  +Y  ++ GLC + R   A EL   + ++    + VT+N +I+ LC  G +++A +L
Sbjct: 425 PNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIEL 484

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              M  N  +P++I + T+I G  +     + +ELL+ M +K + P+  I S +   L
Sbjct: 485 LKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASAL 542



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 171/399 (42%), Gaps = 36/399 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY  ++  LC  G +  A A+   M      P    Y+  +   C A+ +  A  +
Sbjct: 109 PNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGV 168

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL-DL--------------------- 111
             ++  +G    V   N+++  +C  G +DEA RLL DL                     
Sbjct: 169 LRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLC 228

Query: 112 --------------MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
                         MV     PN  T+STL+   C  G   R  E+   M   GC  D  
Sbjct: 229 MARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVR 288

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            Y  +I+G CK + +E A  +   M S G+ P VV YNTL  GL    + E A  L  EM
Sbjct: 289 MYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEM 348

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
              D   D  T+N  +D LC+NG +   +E+   +    C  D+  Y  +I+G CK G +
Sbjct: 349 FDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLI 408

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A+ L RS+       + V+Y I++ GLC+  +   A +L   M +    PN + F TL
Sbjct: 409 DEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTL 468

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           I+   +     + IELL +M      PD    S V+D L
Sbjct: 469 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 507



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 150/322 (46%), Gaps = 4/322 (1%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           YN+++ G C A    +            V P+  T+  ++  LC  G++ +A  +LD M 
Sbjct: 82  YNAMVAGYCRAG---QLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
           +R   P    Y   ++  C       A  +   +   GC  D  + N+++   C    V+
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 174 EALSLYREMV-SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           EA+ L R+++ S G +P VV+YN +  GL    +  H   L EEM       +  T++T 
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           I  LC+NG      E+   +    C  D++ Y  +IDG+CK  RLE+A  +   +P   L
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
             +VV YN ++ GLC+  + ++A  L  +M +     + + F  L+    +     +VIE
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIE 378

Query: 353 LLHKMKEKKVMPDASIVSMVVD 374
           +L +M E   MPD    + V++
Sbjct: 379 VLEQMLEHGCMPDVITYTTVIN 400


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/363 (34%), Positives = 187/363 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTYN++++ L K G  ++A+ LF ++K     PDVV+Y+ LI+ L  A  W  A  +
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G +P++ T+N ++D L K G+ DEA RLL  M      P+  TY+ L+     
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A  LF  M   GC  D  +YN LI G  K    ++A+ L  EM   G  P V+T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y++L  GL +  +   A KLF+EM+R     D+ T+   +D L K G + +A+EL   + 
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +  +  YN LI G  K G L  A  L   + R     DVVTY+ +I GL    Q+D
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  +   ME+    P+ I + TLI+G  +    +    L  +MK K   PD    S ++
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLI 366

Query: 374 DLL 376
             L
Sbjct: 367 TAL 369



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 122/356 (34%), Positives = 192/356 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TYN +I  L K G + +A  LF +M+     PD  TYNSLI+GL       +A 
Sbjct: 110 CVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAM 169

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM   G  P V+T++ ++  L K+G+  +A +L   M +R  +P++ T++ LMD  
Sbjct: 170 ELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDAL 229

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+++ A EL   M+  G K   V+YN LI G+ K  ++ EA +L  EM   G KP V
Sbjct: 230 GKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDV 289

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+ L  GL +  Q++ A ++ ++M+++    DT TYNT I+GL K G + +A  LF  
Sbjct: 290 VTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDR 349

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  D+  Y+ LI  L K+ R+E A  LF  +    +  D+ TY  +I  L   GQ
Sbjct: 350 MKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQ 409

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           +D A  LF +M    ++P+VI +   ++   R  +  +  ++   MKE  ++PD +
Sbjct: 410 VDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVA 465



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 123/355 (34%), Positives = 192/355 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+T TYN++I GL K G   KA  L  +M+     PDV+TY+SLI GL    +  +A 
Sbjct: 145 CVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAF 204

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +LF EM  +G +P  +TF  +MD L K G++D+A  LLD M +R V+P   TY+ L+ GF
Sbjct: 205 KLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGF 264

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G +  A  L   M+  GCK D V+Y+ LI G  K  +++EA  + ++M  +G  P  
Sbjct: 265 GKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDT 324

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYNTL  GL +   +  A +LF+ M+      D  TY+T I  L K   +  A  LF  
Sbjct: 325 ITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEE 384

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +  + D+  Y  +I  L K+G+++ A  LF  +  + L  DV+TYN  ++ L   G+
Sbjct: 385 MESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGR 444

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             +A  +F DM+E+ + P+V  +  L+ G  +  +      LL ++ E+    D+
Sbjct: 445 FKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDS 499



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/354 (34%), Positives = 186/354 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN  TYNT++D L K G  D+A  L  +M+     PDV TYN LI  L  A   +EA 
Sbjct: 75  CKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAF 134

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM ++G  P   T+N ++  L K G+  +A  LL+ M +    P+  TYS+L+ G 
Sbjct: 135 TLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGL 194

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+  +A +LF  M+  G K D +++  L++   K   V++AL L  EM  +G+KP V
Sbjct: 195 GKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGV 254

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN L  G  ++  +  A  L +EM+R+    D  TY+  I GL K   + EA ++ + 
Sbjct: 255 VTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKK 314

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  D   YN LI+GL K+G L  A  LF  +  +    DVVTY+ +I  L    +
Sbjct: 315 MEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAAR 374

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++ A  LF +ME   + P++  + ++I    +  +      L  +M+ K + PD
Sbjct: 375 VESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPD 428



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 188/365 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY+++I GL K+G   KA  LF +MK     PD +T+ +L+  L  A   ++A 
Sbjct: 180 CPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDAL 239

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM ++GV+P VVT+N ++    K G + EA  LLD M +   +P+  TYS L+ G 
Sbjct: 240 ELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGL 299

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +++ A ++   ME  GC  D ++YN LING  K   + +A  L+  M SKG  P V
Sbjct: 300 IKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDV 359

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+TL   L +  +VE A  LFEEM+   +  D  TY + I  L K G + +A  LF  
Sbjct: 360 VTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSE 419

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D+  YN  ++ L + GR + A ++F  +    L+ DV TY+ ++ GL    +
Sbjct: 420 MRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKE 479

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D A  L  ++ E   A + + F   +          +  ELL     K + P AS  + 
Sbjct: 480 VDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNA 539

Query: 372 VVDLL 376
           ++D L
Sbjct: 540 LIDAL 544



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 187/364 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+++T+  ++D L K G VD A  L  +MK   + P VVTYN+LI G     D  EA  
Sbjct: 216 KPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYN 275

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM   G +P VVT++ ++  L K  ++DEA ++L  M +    P+  TY+TL++G  
Sbjct: 276 LLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLG 335

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +N A  LF  M+S GC  D V+Y+ LI    K   VE A  L+ EM S GI+P + 
Sbjct: 336 KAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLF 395

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY ++   L +  QV+ A +LF EM+   ++ D  TYN F++ L + G   EA ++F  +
Sbjct: 396 TYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDM 455

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D+  Y+ L+ GL K+  ++ A  L + L  +    D + ++  +  L + G +
Sbjct: 456 KESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNV 515

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+AH+L        + P    +  LI    +  + S+    L  +KE+   PD    S +
Sbjct: 516 DEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSL 575

Query: 373 VDLL 376
           +  L
Sbjct: 576 ISAL 579



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/329 (32%), Positives = 184/329 (55%)

Query: 48  NPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR 107
           +P+VVTYNSL++ L  A    EA+ LF E+      P VV+++ +++ L + GK + A  
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
           ++  M  +  +PN +TY+TL+D     G+ + A  L   M   GC  D  +YN LI+   
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           K   + EA +L+ EM  +G  P   TYN+L  GL ++ + + A++L EEM+R     D  
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           TY++ I GL K+G  V+A +LF+ +     + D   +  L+D L K+GR++ ALEL   +
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
             R +   VVTYN +I G    G + +A++L  +M+ N   P+V+ +  LI G ++ ++ 
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQL 305

Query: 348 SKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +  ++L KM+++   PD    + +++ L
Sbjct: 306 DEACQVLKKMEKEGCPPDTITYNTLINGL 334



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 179/348 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VTYN +I G  K G + +A  L  +MK     PDVVTY+ LI GL  A+  +EA +
Sbjct: 251 KPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQ 310

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M  +G  P  +T+N +++ L K G +++A RL D M  +   P+  TYSTL+    
Sbjct: 311 VLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALG 370

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++  A  LF  MES+G + D  +Y  +I    K  +V++A  L+ EM  KG+ P V+
Sbjct: 371 KAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVI 430

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN     L    + + A K+FE+M+   +  D +TY+  + GL K   + +A  L + L
Sbjct: 431 TYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKEL 490

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D   ++  ++ L   G ++ A EL +    + L     +YN +I  L   G++
Sbjct: 491 IEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRV 550

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +A +   D++E    P+++ + +LI    +  +     ELL +M ++
Sbjct: 551 SEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKR 598



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 170/328 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+ VTY+ +I GL K   +D+A  +  +M+ E   PD +TYN+LI+GL  A   N+A 
Sbjct: 285 CKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAG 344

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RLF  M  +G  P VVT++ ++  L K  +++ A  L + M    ++P+ FTY +++   
Sbjct: 345 RLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVL 404

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+++ A+ LF  M   G   D ++YN  +N   +    +EA  ++ +M   G+ P V
Sbjct: 405 GKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDV 464

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY+ L LGL +  +V+ A  L +E+     A D+  ++  ++ L   G + EA EL + 
Sbjct: 465 ATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQF 524

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                      +YN LID L K+GR+  A      L  +    D+V+Y+ +I  L   GQ
Sbjct: 525 ANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQ 584

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           +D A +L  +M +  +  +   +  L+ 
Sbjct: 585 IDTAFELLEEMSKRGLKLSPRSYSNLVR 612



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 44/83 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   +YN +ID L K G V +A      +K +   PD+V+Y+SLI  L      + A  L
Sbjct: 532 PGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFEL 591

Query: 74  FFEMMDQGVQPSVVTFNVIMDEL 96
             EM  +G++ S  +++ ++ +L
Sbjct: 592 LEEMSKRGLKLSPRSYSNLVRKL 614


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/366 (33%), Positives = 212/366 (57%), Gaps = 7/366 (1%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           V +P+ V+YNT+++G  K G V KA ALF +MK   I   + ++N ++ GLC     + A
Sbjct: 132 VFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAV-LRSHNIVLRGLCSGGKISMA 190

Query: 71  KRLFFEMMDQGV-QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
             +F +M   G+  P+++++ +++D LCK+ K+D+A  L   MV + + P+  TY  L+D
Sbjct: 191 WEVFKDM--SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALID 248

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-IK 188
           G     ++  A +LF    + GC    V+YN +I+G CK   +E AL+LY +MV +  +K
Sbjct: 249 GLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLK 308

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P + TY+ L  GL   ++ E A +L+EEM     + D  TYNT +DGLCK+G   +A+E+
Sbjct: 309 PDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEI 368

Query: 249 FRTLGILK-CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           FR +G+   C+ ++  Y  LID  CK  RL  A++L + +  R L+ D VT+  +I  LC
Sbjct: 369 FRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLC 428

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            + ++D+AH+LF  + +    P+ ++F T++ G+ +I +     +L  +M +    P  +
Sbjct: 429 KESRIDEAHELFESIGKTC-KPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLA 487

Query: 368 IVSMVV 373
             + +V
Sbjct: 488 TYTALV 493



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 117/318 (36%), Positives = 177/318 (55%), Gaps = 3/318 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN ++Y  +IDGLCK   VDKA  LF QM  + I PDVVTY +LI GL       EA  L
Sbjct: 203 PNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDL 262

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-VRPNAFTYSTLMDGFC 132
           F E   +G  P+VVT+N ++D LCK G+++ A  L D MV+   ++P+ FTYS L++G  
Sbjct: 263 FEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLN 322

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM-VSKGIKPTV 191
           L+ +  +A EL+  M   GC  D V+YN L++G CK+   ++A+ ++R+M V     P V
Sbjct: 323 LSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNV 382

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY  L     ++ ++  A+KL +EM+   +  D  T+ T I  LCK   I EA ELF +
Sbjct: 383 ITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFES 442

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +G   C+ D   +N ++ G CK  R++ A +L   +        + TY  ++ G C  G+
Sbjct: 443 IG-KTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGR 501

Query: 312 MDKAHDLFLDMEENAVAP 329
              A  ++ +M E    P
Sbjct: 502 YSDALIMYHEMIEMGFPP 519



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/327 (33%), Positives = 175/327 (53%), Gaps = 6/327 (1%)

Query: 53  TYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM 112
           T N+L+     A    +A   F   M    +P  V++N +M+   K G + +A  L   M
Sbjct: 104 TCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEM 163

Query: 113 VQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
               +     +++ ++ G C  GKI+ A E+F  M  +    + +SY I+I+G CK+++V
Sbjct: 164 KDSGI-AVLRSHNIVLRGLCSGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCKSRKV 221

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           ++A++L+++MV K I P VVTY  L  GL +  +V+ A  LFEE +         TYNT 
Sbjct: 222 DKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTM 281

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           IDGLCK G I  A+ L+  + + +  L  D+  Y+ LI+GL  S R E A EL+  +   
Sbjct: 282 IDGLCKCGRIENALTLYDDM-VREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDT 340

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME-ENAVAPNVIIFVTLIHGFVRINKPSK 349
               DVVTYN ++ GLC  G  DKA ++F  M   N   PNVI +  LI  F ++++   
Sbjct: 341 GCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGD 400

Query: 350 VIELLHKMKEKKVMPDASIVSMVVDLL 376
            ++L  +M+ + ++PDA   + V+  L
Sbjct: 401 AVKLAKEMEGRSLLPDAVTFTTVIQKL 427



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 119/225 (52%), Gaps = 5/225 (2%)

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
           H+  + N L++ Y K + VE+A   ++  +    +P  V+YNTL  G F+   V+ AL L
Sbjct: 100 HNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALAL 159

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL-GILKCELDIQAYNCLIDGLC 272
           F EM+   +A    ++N  + GLC  G I  A E+F+ + GI    L   +Y  +IDGLC
Sbjct: 160 FGEMKDSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDMSGIFSPNL--ISYTIMIDGLC 216

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           KS +++ A+ LF+ +  + +  DVVTY  +I GL    ++ +A+DLF +       P V+
Sbjct: 217 KSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVV 276

Query: 333 IFVTLIHGFVRINKPSKVIELLHKM-KEKKVMPDASIVSMVVDLL 376
            + T+I G  +  +    + L   M +E  + PD    S +++ L
Sbjct: 277 TYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGL 321



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 80/144 (55%), Gaps = 1/144 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G VC PN +TY  +ID  CK   +  A  L  +M+G ++ PD VT+ ++I  LC  +  
Sbjct: 374 VGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRI 433

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +EA  L FE + +  +P  V FN ++   CK  ++D+A +L D M+     P   TY+ L
Sbjct: 434 DEAHEL-FESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTAL 492

Query: 128 MDGFCLTGKINRAEELFGSMESMG 151
           + GFC TG+ + A  ++  M  MG
Sbjct: 493 VTGFCRTGRYSDALIMYHEMIEMG 516



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 44/77 (57%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           IG  CKP++V +NT++ G CK   +D AK L  +M      P + TY +L+ G C    +
Sbjct: 443 IGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRY 502

Query: 68  NEAKRLFFEMMDQGVQP 84
           ++A  ++ EM++ G  P
Sbjct: 503 SDALIMYHEMIEMGFPP 519


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 186/362 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N VTYNT+I GLC+ G +++A     +M+   + PD  TY ++I+GLC     ++AK
Sbjct: 274 CSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAK 333

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM   G+ P+VV ++ ++D   + G  DEA +++  M    V+PN  TY  L+ G 
Sbjct: 334 CLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGL 393

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++ RA  +   M  +G   D ++YN++I G+ +    EEA  L  EM   GI P V
Sbjct: 394 CKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNV 453

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY+ +  GL +I + E A  L E+M  D +  +   Y   I G C+ G    A E  + 
Sbjct: 454 YTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKK 513

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D+  YN LI GL   G+++ A+E +  +  +    +  TY  +IHG    G 
Sbjct: 514 MTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGN 573

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           ++KA  L   M  + + PN  I+  ++ G+ + +   KV   L  M EK +MPD  +  +
Sbjct: 574 LEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGI 633

Query: 372 VV 373
           V+
Sbjct: 634 VI 635



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 185/366 (50%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G    P+  TY+T+I+  CK   ++ AK +  +M+    + +VVTYN+LI GLC A    
Sbjct: 236 GAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIE 295

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA     EM D G+ P   T+  I++ LCK G+ D+A  LLD M    + PN   YSTL+
Sbjct: 296 EAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLI 355

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DGF   G  + A ++   M + G + + ++Y+ LI G CK   +  A  + ++M   G  
Sbjct: 356 DGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYM 415

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
              +TYN +  G    H  E A  L  EM++  ++ +  TY+  I+GLC+ G    A  L
Sbjct: 416 ADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGL 475

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +     + +   Y  LI G C+ G   +A E  + + R  L  D+  YN +I GL N
Sbjct: 476 LEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSN 535

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G+MD+A + + +M E    PN   +  LIHG+       K  +LLH+M    + P+  I
Sbjct: 536 VGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFI 595

Query: 369 VSMVVD 374
            + +++
Sbjct: 596 YAQILE 601



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 184/395 (46%), Gaps = 34/395 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PN  TY+ II+GLC+ G  ++A  L  QM  + + P+   Y  LI G C    ++ A  
Sbjct: 450 SPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACE 509

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +M  + + P +  +N ++  L   GKMDEA    D M+++  +PN FTY  L+ G+ 
Sbjct: 510 TLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYS 569

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + G + +AE+L   M + G   +D  Y  ++ GY K+  +E+  S  + M+ KG+ P   
Sbjct: 570 MAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNR 629

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y  +   L     ++ A+ +   ++++ +  D+  Y + I G CK   + +AV L   +
Sbjct: 630 LYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEM 689

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                E  I  YN LIDG CKS  +  A  +F S+  + L  + VTY  +I G C  G +
Sbjct: 690 AKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDI 749

Query: 313 DKAHDLFLDMEENAVAPNVII----------------------------------FVTLI 338
             A DL+ +M    VAP+  +                                  F TL+
Sbjct: 750 RDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLV 809

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           HGF +  K  + ++ LH M +K ++P    V  +V
Sbjct: 810 HGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIV 844



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 176/362 (48%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +TY+ +I GLCK G + +A  +  QM       D +TYN +I G    ++  EA  
Sbjct: 380 QPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFL 439

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM   G+ P+V T+++I++ LC+ G+ + AS LL+ M+   ++PNAF Y+ L+ G+C
Sbjct: 440 LLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYC 499

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  + A E    M       D   YN LI G     +++EA+  Y EM+ KG +P   
Sbjct: 500 REGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDF 559

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L  G      +E A +L  +M    +  +   Y   ++G  K+  + +     +++
Sbjct: 560 TYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSM 619

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D + Y  +I  L  SG ++ A+ +   + +  LV D + Y  +I G C    M
Sbjct: 620 LEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADM 679

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +KA  L  +M +  + P +  +  LI GF + +  S    + + +  K + P+    + +
Sbjct: 680 EKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTL 739

Query: 373 VD 374
           +D
Sbjct: 740 ID 741



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 176/383 (45%), Gaps = 36/383 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN   Y  +I G C+EG    A     +M  EN+ PD+  YNSLI GL +    +EA  
Sbjct: 485 KPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIE 544

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF- 131
            + EM+++G QP+  T+  ++      G +++A +LL  M+   + PN F Y+ +++G+ 
Sbjct: 545 YYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYF 604

Query: 132 ----------------------------------CLTGKINRAEELFGSMESMGCKHDDV 157
                                               +G +  A  +   +E  G   D +
Sbjct: 605 KSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSL 664

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            Y  LI+G+CK  ++E+A+ L  EM  KGI+P +  YN L  G  +   + HA  +F  +
Sbjct: 665 IYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSI 724

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
               +  +  TY T IDG CK G I +A++L+  +       D   Y+ L  G   SG L
Sbjct: 725 ICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDL 784

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + AL +   +  R   A + ++N ++HG C  G++ +       M +  + P+++    +
Sbjct: 785 QQALFITEEMIARG-YAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENI 843

Query: 338 IHGFVRINKPSKVIELLHKMKEK 360
           + G     K S+   +  ++++K
Sbjct: 844 VIGLGEAGKLSEAHTIFVELQQK 866



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 166/352 (47%), Gaps = 6/352 (1%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V  + ++D   K G V     + L MK   + P +   N L+  L  A+  +   ++   
Sbjct: 174 VVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGF 233

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M   G+ P V T++ +++  CK   ++ A ++++ M +     N  TY+TL+ G C  G 
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 137 INRAEELFG---SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           I   EE FG    ME  G   D  +Y  +ING CK    ++A  L  EM   G+ P VV 
Sbjct: 294 I---EEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVV 350

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+TL  G       + A K+ +EM    V  +  TY+  I GLCK G +  A  + + + 
Sbjct: 351 YSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMT 410

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +    D   YN +I+G  +    E A  L   + +  +  +V TY+I+I+GLC  G+ +
Sbjct: 411 KIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESE 470

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A  L   M  + + PN  ++  LI G+ R    S   E L KM  + + PD
Sbjct: 471 RASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPD 522



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 171/381 (44%), Gaps = 22/381 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN----- 68
           P    +  +   LC  G   +A  L  QM      P +V   S +H     +D       
Sbjct: 118 PAPDAFAHLAVSLCAAGLYPQANGLLDQMIRAYPTPPLVL--SSVHRALSGSDQGRRPVV 175

Query: 69  ---------------EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
                          +   +   M D G+ PS+   N ++ +L +   +D   ++   M 
Sbjct: 176 LDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFME 235

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
              + P+ +TYSTL++ +C    +  A+++   M   GC  + V+YN LI G C+   +E
Sbjct: 236 GAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIE 295

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           EA    +EM   G+ P   TY  +  GL +  + + A  L +EM    +  +   Y+T I
Sbjct: 296 EAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLI 355

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
           DG  + G   EA ++ + +     + +   Y+ LI GLCK GR+  A  + + + +   +
Sbjct: 356 DGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYM 415

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
           AD +TYN++I G       ++A  L  +M +  ++PNV  +  +I+G  +I +  +   L
Sbjct: 416 ADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGL 475

Query: 354 LHKMKEKKVMPDASIVSMVVD 374
           L +M    + P+A + + ++ 
Sbjct: 476 LEQMIADGLKPNAFVYAPLIS 496



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 144/276 (52%), Gaps = 21/276 (7%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+++ Y ++I G CK   ++KA  L  +M  + I P +  YN+LI G C ++D + A+ +
Sbjct: 661 PDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNI 720

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  ++ +G+ P+ VT+  ++D  CK G + +A  L + M+   V P+AF YS L  G   
Sbjct: 721 FNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSN 780

Query: 134 TGKINRAEELFGSMESMGCKHDDVS-YNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +G + +A  LF + E +   +  +S +N L++G+CK  +++E +     M+ K I P+++
Sbjct: 781 SGDLQQA--LFITEEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLL 838

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVA-ADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           T   + +GL E  ++  A  +F E+Q+ + +  DT   ++    +   G +         
Sbjct: 839 TVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLV--------- 889

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
                  LD+   + +I   CK G L+ AL L  +L
Sbjct: 890 ------PLDV--IHNMIQSHCKQGYLDKALMLHDAL 917



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 23/199 (11%)

Query: 10  VVCK---PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           ++CK   PN VTY T+IDG CK G +  A  L+ +M  E + PD   Y+ L  G  ++ D
Sbjct: 724 IICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGD 783

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A  +  EM+ +G    + +FN ++   CK GK+ E  + L +M+ +D+ P+  T   
Sbjct: 784 LQQALFITEEMIARGYA-IISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVEN 842

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSY-------------------NILINGYC 167
           ++ G    GK++ A  +F  ++     H D  +                   + +I  +C
Sbjct: 843 IVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHNMIQSHC 902

Query: 168 KNKEVEEALSLYREMVSKG 186
           K   +++AL L+  +V+KG
Sbjct: 903 KQGYLDKALMLHDALVAKG 921


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/354 (36%), Positives = 190/354 (53%), Gaps = 3/354 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   +N ++  LCK G V +A  L  ++    ++ ++ TYN  I GLC A    EA RL
Sbjct: 187 PNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRL 246

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M    V P VVT+N ++  LCK     EA   L  M+ +   P+ FTY+T++DG+C 
Sbjct: 247 VDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCK 305

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +  A EL       G   D V+Y  LING C   +VE AL L+ E  +KGIKP +V 
Sbjct: 306 ISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVV 365

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L  GL     + HAL++  EM  +    D  TYN  I+GLCK G I +A  +     
Sbjct: 366 YNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMND-A 424

Query: 254 ILKCEL-DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           I+K  L D+  +N LIDG CK  +L+ AL+L   +    +  D +TYN +++GLC  G++
Sbjct: 425 IMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKV 484

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           ++ ++ F +M      PN I +  LI  F R NK  +  +++ KM ++ + PDA
Sbjct: 485 NEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDA 538



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 190/359 (52%), Gaps = 1/359 (0%)

Query: 16  TVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFF 75
            V Y T++ GL   G    A+ LF QM   ++ P++  +N ++H LC   D  EA  L  
Sbjct: 154 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLG 213

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
           +++ +G+  ++ T+N+ +  LC+ G++ EA RL+D M    V P+  TY+TL+ G C   
Sbjct: 214 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKS 272

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
               A      M + GC  DD +YN +I+GYCK   V+EA  L ++ V KG  P  VTY 
Sbjct: 273 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 332

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           +L  GL     VE AL+LF E Q   +  D   YN+ + GLC  G I+ A+++   +   
Sbjct: 333 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 392

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
            C  DIQ YN +I+GLCK G +  A  +      +  + DV T+N +I G C   ++D A
Sbjct: 393 GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSA 452

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             L   M E  +AP+ I + ++++G  +  K ++V E   +M  K   P+    +++++
Sbjct: 453 LQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIE 511



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 110/328 (33%), Positives = 178/328 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+I GLCK+    +A     +M  +   PD  TYN++I G C  +   EA  L
Sbjct: 256 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 315

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             + + +G  P  VT+  +++ LC  G ++ A  L +    + ++P+   Y++L+ G CL
Sbjct: 316 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 375

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G I  A ++   M   GC  D  +YNI+ING CK   + +A  +  + + KG  P V T
Sbjct: 376 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 435

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +NTL  G  +  +++ AL+L E M    +A DT TYN+ ++GLCK G + E  E F+ + 
Sbjct: 436 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 495

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +  C  +   YN LI+  C+S ++E A ++   + +  L  D V++N +I+G C +G ++
Sbjct: 496 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 555

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            A+ LF  +EE   +     F TLI  F
Sbjct: 556 GAYLLFQKLEEKGYSATADTFNTLIGAF 583



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/346 (33%), Positives = 177/346 (51%), Gaps = 1/346 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  TYN  I GLC+ G + +A  L   M+   + PDVVTYN+LI GLC  +   EA    
Sbjct: 223 NLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYL 281

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             MM+QG  P   T+N I+D  CK   + EA+ LL   V +   P+  TY +L++G C  
Sbjct: 282 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 341

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G + RA ELF   ++ G K D V YN L+ G C    +  AL +  EM  +G  P + TY
Sbjct: 342 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 401

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N +  GL ++  +  A  +  +        D  T+NT IDG CK   +  A++L   +  
Sbjct: 402 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 461

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D   YN +++GLCK+G++    E F+ +  +    + +TYNI+I   C   +M++
Sbjct: 462 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 521

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           A  + + M +  + P+ + F TLI+GF R         L  K++EK
Sbjct: 522 ASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 567



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 193/352 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY ++I+GLC EG V++A  LF + + + I PD+V YNSL+ GLC       A ++
Sbjct: 326 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQV 385

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM ++G  P + T+N++++ LCK G + +A+ +++  + +   P+ FT++TL+DG+C 
Sbjct: 386 MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 445

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K++ A +L   M   G   D ++YN ++NG CK  +V E    ++EM+ KG  P  +T
Sbjct: 446 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 505

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L       +++E A K+  +M ++ +  D  ++NT I G C+NG +  A  LF+ L 
Sbjct: 506 YNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLE 565

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                     +N LI        + +A ++F  +  +   AD  TY ++I G C    +D
Sbjct: 566 EKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVD 625

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A+   ++M +    P++  F  +I+     ++  + + ++H M +  V+P+
Sbjct: 626 RAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPE 677



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 156/334 (46%), Gaps = 33/334 (9%)

Query: 75  FEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           FE MD     P+   +N IMD L      D+A ++   M+   V P+  T++  +  FCL
Sbjct: 76  FERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCL 135

Query: 134 TGKINRAEELFGSMESMGC---------------KHDD----------------VSYNIL 162
           T + + A  L  ++   G                 HD                  ++N +
Sbjct: 136 TARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKV 195

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           ++  CK  +V EA  L  +++ +G+   + TYN    GL E  ++  A++L + M R   
Sbjct: 196 LHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYA 254

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
             D  TYNT I GLCK     EA+   R +    C  D   YN +IDG CK   ++ A E
Sbjct: 255 VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATE 314

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           L +    +  V D VTY  +I+GLC +G +++A +LF + +   + P+++++ +L+ G  
Sbjct: 315 LLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLC 374

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                   ++++++M E+   PD    ++V++ L
Sbjct: 375 LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 408



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 94/181 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN +TYN +I+  C+   +++A  + ++M  E ++PD V++N+LI+G C   D   A 
Sbjct: 499 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAY 558

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF ++ ++G   +  TFN ++        M  A ++ D M+ +  R +++TY  L+DG 
Sbjct: 559 LLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGS 618

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C T  ++RA      M   G      ++  +IN    N  V +A+ +   MV  G+ P V
Sbjct: 619 CKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 678

Query: 192 V 192
           V
Sbjct: 679 V 679


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/385 (32%), Positives = 206/385 (53%), Gaps = 23/385 (5%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN ++Y+T++DGLCK G +D+A  L+ +M  ++  PD+V Y S + GLC AN   EA 
Sbjct: 175 CEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEAC 234

Query: 72  RLFFEMMDQGVQPSVVTF-----------------NVIMDELCKNGKMDEASRLLDLMVQ 114
               +M+ +G +   V F                 N +++ LC++G +DEA +  + M+ 
Sbjct: 235 DCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMIS 294

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG---CKHDDVSYNILINGYCKNKE 171
           R+  P+A  ++TL+   C + ++     LF  M+SM    C  +  +YNI+++  CK K+
Sbjct: 295 RNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQ 354

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           ++EA  L  EM + G+ P VVTY+ L  GL ++ +++ A  L EEM ++ V  D+ T  +
Sbjct: 355 LDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDAS 414

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            ++ L K G +  A+    T+       D+  YN L+DGLCK+GR++ A+     +    
Sbjct: 415 ILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK 474

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
              DV +Y I+I  LC  GQ   AH +F +M +  V P+ +++ +L+ G  R       +
Sbjct: 475 CTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLAL 534

Query: 352 ELLHKMKEKKVMPDASIVSMVVDLL 376
           ELL   K     PD  +  MV+D L
Sbjct: 535 ELL---KTSLCKPDFVMHKMVLDGL 556



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/385 (31%), Positives = 198/385 (51%), Gaps = 23/385 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY+ ++ GLCK G +DKAK L  Q++   +  +V+TY+ +I G C A+  ++A  +
Sbjct: 71  PDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEI 130

Query: 74  FFEMMD-QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           F  M    G  P VVTFN ++  LC   +M EA  L + M +    PN  +YSTL+DG C
Sbjct: 131 FKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLC 190

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ A  L+  M    C  D V+Y   + G CK   V EA    R+MV+KG K   V
Sbjct: 191 KAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAV 250

Query: 193 TYNTLFLGLF---------EIHQVEH---------ALKLFEEMQRDDVAADTSTYNTFID 234
            ++T+ +G+          +   +EH         A K FEEM   +       +NT I 
Sbjct: 251 AFSTV-IGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIH 309

Query: 235 GLCKNGYIVEAVELFRTLGILK---CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            +CK+  + + V LF+ +  +K   C  +++ YN ++D LCK+ +L+ A EL   +    
Sbjct: 310 AVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYG 369

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           L  DVVTY+ ++ GLC  G++D+A DL  +M +  V P+     ++++   +  K    +
Sbjct: 370 LSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYAL 429

Query: 352 ELLHKMKEKKVMPDASIVSMVVDLL 376
             L  MK +   PD    + ++D L
Sbjct: 430 SHLETMKARGSTPDLVTYNTLLDGL 454



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 170/315 (53%), Gaps = 6/315 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN---INPDVVTYNSLIHGLCHANDWNEA 70
           P+   +NT+I  +CK   +     LF +MK        P++ TYN ++  LC A   +EA
Sbjct: 299 PSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEA 358

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           + L  EM + G+ P VVT++ ++D LCK GK+D A  LL+ M +  V P++FT +++++ 
Sbjct: 359 QELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNA 418

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               GK++ A     +M++ G   D V+YN L++G CK   ++EA++   +MV+    P 
Sbjct: 419 LSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V +Y  +   L    Q   A  +F+EM +  V  DT  Y++ +DGL +NG    A+EL +
Sbjct: 479 VFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK 538

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
           T     C+ D   +  ++DGLCK+G+ E A E+   +      AD  TY  ++ GL   G
Sbjct: 539 TS---LCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLG 595

Query: 311 QMDKAHDLFLDMEEN 325
           ++DKA  L  D  E 
Sbjct: 596 KVDKARQLVDDASET 610



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 184/382 (48%), Gaps = 56/382 (14%)

Query: 51  VVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD 110
           V TYN  +  L  AN    A   F +M  +G  P   T+++++  LCK G++D+A  LL 
Sbjct: 38  VFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLG 97

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES-MGCKHDDVSYNILINGYCKN 169
            + +  V+ N  TYS ++DG C   +++ A E+F +M S  GC  D V++N L+ G C  
Sbjct: 98  QLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSG 157

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
           + + EA  L+  M   G +P V++Y+TL  GL +  +++ A +L+EEM       D   Y
Sbjct: 158 ERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAY 217

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDI-----------------QAYNCLIDGLC 272
            +F+ GLCK   + EA +  R +     + D                  +A N +I+ LC
Sbjct: 218 TSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLC 277

Query: 273 KSGRLEIALELF-------------------------RSLPRRVLV-------------A 294
           +SG L+ A + F                         + LP  VL+              
Sbjct: 278 RSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPP 337

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           ++ TYNIM+  LC   Q+D+A +L  +M    ++P+V+ +  L+ G  ++ K  +  +LL
Sbjct: 338 NLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLL 397

Query: 355 HKMKEKKVMPDASIVSMVVDLL 376
            +M ++ V PD+   + +++ L
Sbjct: 398 EEMSKEGVFPDSFTDASILNAL 419



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 128/252 (50%), Gaps = 2/252 (0%)

Query: 89  FNVIMDELCKNGKMDEASRLLD-LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
           + V+ + L   GK+    RL D L  Q+  + + FTY+  +D          A E F  M
Sbjct: 5   YTVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
           +  G   DD +Y+I++ G CK  E+++A  L  ++   G+K  V+TY+ +  G  +  +V
Sbjct: 65  QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRV 124

Query: 208 EHALKLFEEMQR-DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           + AL++F+ M        D  T+N+ + GLC    + EA  LF  +    CE ++ +Y+ 
Sbjct: 125 DDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYST 184

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           L+DGLCK+GRL+ A  L+  +  +  V D+V Y   + GLC   ++ +A D    M    
Sbjct: 185 LLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKG 244

Query: 327 VAPNVIIFVTLI 338
              + + F T+I
Sbjct: 245 SKADAVAFSTVI 256



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 5/137 (3%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +   C P+  +Y  II  LC+ G    A A+F +M    + PD V Y+SL+ GL      
Sbjct: 471 VAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLAR---- 526

Query: 68  NEAKRLFFEMMDQGV-QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           N  + L  E++   + +P  V   +++D LCK GK ++A  +++ M       +AFTY +
Sbjct: 527 NGLEDLALELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYIS 586

Query: 127 LMDGFCLTGKINRAEEL 143
           ++ G    GK+++A +L
Sbjct: 587 VVSGLRKLGKVDKARQL 603


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/390 (32%), Positives = 201/390 (51%), Gaps = 35/390 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TYN +++G C +G +D+A  +  +M+  N+ PDVVTYN+LI G     D +E   L
Sbjct: 316 PTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSL 375

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +GV+ + VT+N+I+  +CK G M EA+  LD M +  + P+  TY+TL+  +C 
Sbjct: 376 IEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCK 435

Query: 134 TGKINRAEELFGSMESMGCK----------H-------------------------DDVS 158
            GK+ +A  +   M S G K          H                         D+VS
Sbjct: 436 AGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVS 495

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y ILI GY K+++ + AL+L+ EM  + I P+ +TYN++  GL +  +V+ A+    EM 
Sbjct: 496 YGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEML 555

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
            + +  D +TYN  I G C  G + +A +    +     + D+   N L+ GLC+ G LE
Sbjct: 556 ENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLE 615

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            AL+LF +L  +    DVVTYN +I  LC +G+ + A+DL  +ME   + P+   +  +I
Sbjct: 616 KALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVII 675

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASI 368
                  +  +  E   KM E  ++ D ++
Sbjct: 676 AALTDAGRIKEAEEFTLKMVESGIVHDQNL 705



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 186/363 (51%), Gaps = 2/363 (0%)

Query: 3   NGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC 62
           N   E G  C P+TV+YNTI+D L K   + +A+ L L MK + ++P+  TYN L+ G C
Sbjct: 237 NKMSEFG--CVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYC 294

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
                 EA ++   M    + P+V T+N++++  C +GK+DEA R+ D M + +V P+  
Sbjct: 295 RLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVV 354

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TY+TL+DG       +    L   M+  G K + V+YNI++   CK   + EA +   +M
Sbjct: 355 TYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKM 414

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
              G+ P  VTYNTL     +  ++  A ++ +EM    +  DT T NT +  LC    +
Sbjct: 415 EENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKL 474

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            EA  L  +       LD  +Y  LI G  K  + + AL L+  +  R ++   +TYN +
Sbjct: 475 DEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSV 534

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I GLC   ++D+A D   +M EN + P+   +  +IHGF       K  +  ++M E   
Sbjct: 535 IGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLF 594

Query: 363 MPD 365
            PD
Sbjct: 595 KPD 597



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 199/367 (54%), Gaps = 2/367 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           ++GVV  PNT ++N +I G C E  V  A     +M      PD V+YN+++  L     
Sbjct: 206 KLGVV--PNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRL 263

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             EA+ L  +M  +G+ P+  T+N+++   C+ G + EA++++++M + ++ P  +TY+ 
Sbjct: 264 LQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNM 323

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L++GFC  GKI+ A  +   ME M    D V+YN LI+G  + ++  E  SL  EM  KG
Sbjct: 324 LVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKG 383

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +K   VTYN +   + +   +  A    ++M+ + ++ D  TYNT I   CK G + +A 
Sbjct: 384 VKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAF 443

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            +   +     ++D    N ++  LC   +L+ A  L  S  +R  + D V+Y I+I G 
Sbjct: 444 RMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGY 503

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             D + D+A +L+ +M+E  + P+ I + ++I G  +  K  + I+ L++M E  ++PD 
Sbjct: 504 FKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDE 563

Query: 367 SIVSMVV 373
           +  ++++
Sbjct: 564 TTYNIII 570



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 166/319 (52%), Gaps = 2/319 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GV C  N VTYN I+  +CK+G + +A     +M+   ++PD VTYN+LI   C A    
Sbjct: 383 GVKC--NAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMG 440

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A R+  EM  +G++    T N I+  LC   K+DEA  LL    +R    +  +Y  L+
Sbjct: 441 KAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILI 500

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G+    K +RA  L+  M+        ++YN +I G C++++V++A+    EM+  G+ 
Sbjct: 501 LGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLV 560

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P   TYN +  G      VE A +   EM  +    D  T N  + GLC+ G + +A++L
Sbjct: 561 PDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKL 620

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F TL     ++D+  YN +I  LCK G+ E A +L   +  + L  D  TY ++I  L +
Sbjct: 621 FNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTD 680

Query: 309 DGQMDKAHDLFLDMEENAV 327
            G++ +A +  L M E+ +
Sbjct: 681 AGRIKEAEEFTLKMVESGI 699



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 167/377 (44%), Gaps = 38/377 (10%)

Query: 35  AKALFLQMKGENINPDVVTYNS-------------------------------------- 56
           A  +F +MK  N  P+++T N+                                      
Sbjct: 159 ATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNI 218

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
           LI+G C  +   +A     +M + G  P  V++N I+D L K   + EA  LL  M  + 
Sbjct: 219 LIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKG 278

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           + PN  TY+ L+ G+C  G +  A ++   M          +YN+L+NG+C + +++EA 
Sbjct: 279 LSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAF 338

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            +  EM    + P VVTYNTL  G  +         L EEM +  V  +  TYN  +  +
Sbjct: 339 RIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWM 398

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           CK G + EA      +       D   YN LI   CK+G++  A  +   +  + L  D 
Sbjct: 399 CKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDT 458

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
            T N ++H LC + ++D+A++L     +     + + +  LI G+ +  K  + + L  +
Sbjct: 459 WTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDE 518

Query: 357 MKEKKVMPDASIVSMVV 373
           MKE+++MP     + V+
Sbjct: 519 MKERQIMPSTITYNSVI 535



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 154/310 (49%), Gaps = 3/310 (0%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDE---ASRLLDLMVQRDVRPNAFTYST 126
           A ++F +M     +P+++T N +M+ L +         A ++L   ++  V PN  +++ 
Sbjct: 159 ATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNI 218

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ G+CL  K+  A +    M   GC  D VSYN +++   K + ++EA  L  +M SKG
Sbjct: 219 LIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKG 278

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P   TYN L  G   +  ++ A K+ E M R+++     TYN  ++G C +G I EA 
Sbjct: 279 LSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAF 338

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            +   +  +    D+  YN LIDG  +         L   + ++ +  + VTYNI++  +
Sbjct: 339 RIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWM 398

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C  G M +A      MEEN ++P+ + + TLI  + +  K  K   ++ +M  K +  D 
Sbjct: 399 CKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDT 458

Query: 367 SIVSMVVDLL 376
             ++ ++  L
Sbjct: 459 WTLNTILHCL 468


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 114/333 (34%), Positives = 197/333 (59%), Gaps = 3/333 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           +YN++++ LCK   V +A A+F  M  E ++ PDVV+Y+ LI G C  ++   A++L+ +
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQ 182

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+D    P+V T+N  ++ L + G++ +A  + + M+     P+  TYSTL+ GF L  K
Sbjct: 183 MIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARK 242

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
            ++A ELF +M S GC+ + V+YN L++G CK  + +EA  L+R+MV +G  P  VTY T
Sbjct: 243 HDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTT 302

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G   + ++E A+++F+EM       D   YN  + G  + G   EA +LF+ +   +
Sbjct: 303 LLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRE 362

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPR-RVLVADVVTYNIMIHGLCNDGQMDKA 315
           C+ D  ++N +IDGL K+ RL+ A+E+F  + +      D+VTYN +I GLC + ++ +A
Sbjct: 363 CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEA 422

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHG-FVRINKP 347
             +F +++   ++P+   F  L+   +   +KP
Sbjct: 423 MKVFKEIDRLKLSPDPHAFNVLLEAMYAAGHKP 455



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 164/299 (54%), Gaps = 1/299 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+Y+ +IDG CK   + +A+ L+ QM   N  P+V TYN+ ++GL       +A+ +
Sbjct: 155 PDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGV 214

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + EM+  G  P V+T++ ++       K D+A  L + M+ R  RPNA TY+ L+ G C 
Sbjct: 215 YEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCK 274

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K + A ELF  M   GC  D V+Y  L+ G+C   ++E+A+ ++ EMVSKG  P VV 
Sbjct: 275 ESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVA 334

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF-RTL 252
           YN L  G F   +   A +LF+ M   +   DT ++N  IDGL K   + +AVE+F R  
Sbjct: 335 YNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERME 394

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
               C  D+  YN LI GLC   RL  A+++F+ + R  L  D   +N+++  +   G 
Sbjct: 395 QDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 162/269 (60%), Gaps = 1/269 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           I + C PN  TYN  ++GL ++G +  A+ ++ +M     +PDV+TY++LIHG   A   
Sbjct: 184 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKH 243

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  LF  M+ +G +P+ VT+N ++  LCK  K DEA  L   MV+R   P+  TY+TL
Sbjct: 244 DQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTL 303

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + GFC  GKI +A E+F  M S G   D V+YN L+ G+ +  +  EA  L++ MVS+  
Sbjct: 304 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSREC 363

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD-VAADTSTYNTFIDGLCKNGYIVEAV 246
           KP  V++N +  GL +  +++ A+++FE M++D   + D  TYN+ I GLC    + EA+
Sbjct: 364 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAM 423

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSG 275
           ++F+ +  LK   D  A+N L++ +  +G
Sbjct: 424 KVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 179/346 (51%), Gaps = 5/346 (1%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T +++I  LCK G VD A +L   M      PD+ T++ LI+ LC A+   EA+  F + 
Sbjct: 51  TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQE-FLQG 109

Query: 78  MDQGVQ---PSVVTFNVIMDELCKNGKMDEASRLLDLMV-QRDVRPNAFTYSTLMDGFCL 133
           M++ +     S  ++N +++ LCK  K+ +A  +   MV +R V P+  +YS L+DGFC 
Sbjct: 110 MNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCK 169

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++ RAE+L+  M  + C  +  +YN  +NG  +   + +A  +Y EM+S G  P V+T
Sbjct: 170 IDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVIT 229

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+TL  G     + + A +LFE M       +  TYN  + GLCK     EA ELFR + 
Sbjct: 230 YSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 289

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C+ D   Y  L+ G C  G++E A+E+F  +  +    DVV YN ++ G    G+  
Sbjct: 290 ERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPG 349

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           +A  LF  M      P+ +    +I G  +  +    +E+  +M++
Sbjct: 350 EARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQ 395



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 189/369 (51%), Gaps = 8/369 (2%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVV---TYNSLIHGLCHANDWNEAK 71
           N V +   + GLCK G +++A      M+    +       T +S+I  LC A   + A 
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNA---FTYSTLM 128
            L   M+ +G  P + T +++++ELCK  K+ EA   L  M  R +   A   F+Y++L+
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM-NRTISTRASSCFSYNSLL 128

Query: 129 DGFCLTGKINRAEELFGSMES-MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +  C   K+++A  +F +M S      D VSY+ILI+G+CK  E+  A  LY++M+    
Sbjct: 129 NSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNC 188

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P V TYN    GL    ++  A  ++EEM     + D  TY+T I G        +A E
Sbjct: 189 VPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHE 248

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           LF  +    C  +   YNCL+ GLCK  + + A ELFR +  R    D VTY  +++G C
Sbjct: 249 LFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFC 308

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           N G++++A ++F +M      P+V+ +  L+ GF R  KP +  +L   M  ++  PD  
Sbjct: 309 NVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTV 368

Query: 368 IVSMVVDLL 376
             ++++D L
Sbjct: 369 SHNIMIDGL 377



 Score = 44.3 bits (103), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 3/105 (2%)

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV---TYNIMIHGLCNDGQM 312
           K  L+  A+   + GLCKSG++E A E  R++   +  +      T + +I  LC  G++
Sbjct: 6   KAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRV 65

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           D A  L   M +    P++     LI+   + +K  +  E L  M
Sbjct: 66  DSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 121/353 (34%), Positives = 183/353 (51%), Gaps = 3/353 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  +YN ++  LC  G V  A+ LF +M      PDVVTY  LIHG C   +   A +L 
Sbjct: 258 NVCSYNILLKALCDAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLL 314

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+  GV+P+   +  ++  LC  G + +A R+++ MVQR V  +   Y+T++ GFC  
Sbjct: 315 DEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNK 374

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +  A   F  M+  G   D V+Y  +ING C+  E+EEA  L +EM ++ +    VTY
Sbjct: 375 GDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTY 434

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  G  +  ++  A ++   M +  V  +  TY    DGLCK G +  A EL   +  
Sbjct: 435 TVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSN 494

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              EL+   YN LI+GLCK+G LE A+     +    L  DV TY  +I  LC  G +D+
Sbjct: 495 KGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDR 554

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           AH L  +M +  + P ++ +  L++GF    +     +LL  M EK + P+A+
Sbjct: 555 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAA 607



 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 178/357 (49%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           Y T++ G C +G +  A+  F +M+ + +  D VTY ++I+GLC A +  EA++L  EM 
Sbjct: 364 YTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMW 423

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            + +    VT+ V++D  CK GKM EA ++ + MVQR V PN  TY+ L DG C  G + 
Sbjct: 424 ARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQ 483

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A EL   M + G + +  +YN LING CK   +E+A+    +M +  +KP V TY TL 
Sbjct: 484 AANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLI 543

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
             L +   ++ A  L +EM    +     TYN  ++G C +G +    +L   +      
Sbjct: 544 DALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIH 603

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            +   YN L+   C    ++   E+++ +  R +  +  TYNI+I G C    M +A   
Sbjct: 604 PNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYF 663

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
             +M +         +  LI    +  K  +  EL H M+++ +  ++ +    +DL
Sbjct: 664 HDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDL 720



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 139/220 (63%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  TYN++I+GLCK G++++A      M    + PDV TY +LI  LC + D + A  L 
Sbjct: 500 NACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLL 559

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+D+G++P++VT+NV+M+  C +G+++   +LLD M+++++ PNA TY++LM  +C+ 
Sbjct: 560 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIE 619

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
             +    E++  M S     ++ +YNILI G+CK + ++EAL  + EM+ KG + T  +Y
Sbjct: 620 NNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSY 679

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           + L   L +  +   A +LF +M+++ + A++  Y+ +ID
Sbjct: 680 SALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYID 719



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 180/364 (49%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN   Y +++  LC +G++  A  +   M    +  D   Y +++ G C+  D   A+R
Sbjct: 323 EPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARR 382

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM  +G+    VT+  +++ LC+  +++EA +LL  M  R +  +  TY+ L+DG+C
Sbjct: 383 WFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYC 442

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A ++  +M   G   + V+Y  L +G CK  +V+ A  L  EM +KG++    
Sbjct: 443 KRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNAC 502

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  GL +   +E A++   +M    +  D  TY T ID LCK+G +  A  L + +
Sbjct: 503 TYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEM 562

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +  I  YN L++G C SGR+E   +L   +  + +  +  TYN ++   C +  M
Sbjct: 563 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNM 622

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
               +++  M    V PN   +  LI G  +     + +    +M +K     A+  S +
Sbjct: 623 KSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSAL 682

Query: 373 VDLL 376
           + LL
Sbjct: 683 IRLL 686



 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 165/342 (48%), Gaps = 11/342 (3%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
           +  L  +++   I+P     N+++  L      +EA  LF E+  +    +V ++N+++ 
Sbjct: 216 SAPLLRRLRQYGISPSPEACNAVLSRL----PLDEAIELFQELPHK----NVCSYNILLK 267

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            LC  G++ +A +L D M      P+  TY  L+ G C  G++  A +L   M + G + 
Sbjct: 268 ALCDAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEP 324

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           +   Y  ++   C    + +AL +  +MV + +      Y T+  G      +  A + F
Sbjct: 325 NATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWF 384

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           +EMQR  +A D  TY T I+GLC+   + EA +L + +   + ++D   Y  LIDG CK 
Sbjct: 385 DEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKR 444

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G++  A ++  ++ +R +  +VVTY  +  GLC  G +  A++L  +M    +  N   +
Sbjct: 445 GKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTY 504

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +LI+G  +     + +  +  M    + PD    + ++D L
Sbjct: 505 NSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDAL 546



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 83/175 (47%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VTYN +++G C  G V+  K L   M  +NI+P+  TYNSL+   C  N+      
Sbjct: 568 KPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTE 627

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++  M  + V P+  T+N+++   CK   M EA    D M+Q+  R  A +YS L+    
Sbjct: 628 IYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLN 687

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
              K   A ELF  M   G   +   Y+  I+       +E  L+L  E+V   I
Sbjct: 688 KKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVEASI 742


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/354 (36%), Positives = 190/354 (53%), Gaps = 3/354 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   +N ++  LCK G V +A  L  ++    ++ ++ TYN  I GLC A    EA RL
Sbjct: 184 PNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRL 243

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M    V P VVT+N ++  LCK     EA   L  M+ +   P+ FTY+T++DG+C 
Sbjct: 244 VDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCK 302

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +  A EL       G   D V+Y  LING C   +VE AL L+ E  +KGIKP +V 
Sbjct: 303 ISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVV 362

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L  GL     + HAL++  EM  +    D  TYN  I+GLCK G I +A  +     
Sbjct: 363 YNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMND-A 421

Query: 254 ILKCEL-DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           I+K  L D+  +N LIDG CK  +L+ AL+L   +    +  D +TYN +++GLC  G++
Sbjct: 422 IMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKV 481

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           ++ ++ F +M      PN I +  LI  F R NK  +  +++ KM ++ + PDA
Sbjct: 482 NEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDA 535



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 190/359 (52%), Gaps = 1/359 (0%)

Query: 16  TVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFF 75
            V Y T++ GL   G    A+ LF QM   ++ P++  +N ++H LC   D  EA  L  
Sbjct: 151 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLG 210

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
           +++ +G+  ++ T+N+ +  LC+ G++ EA RL+D M    V P+  TY+TL+ G C   
Sbjct: 211 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKS 269

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
               A      M + GC  DD +YN +I+GYCK   V+EA  L ++ V KG  P  VTY 
Sbjct: 270 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 329

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           +L  GL     VE AL+LF E Q   +  D   YN+ + GLC  G I+ A+++   +   
Sbjct: 330 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 389

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
            C  DIQ YN +I+GLCK G +  A  +      +  + DV T+N +I G C   ++D A
Sbjct: 390 GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSA 449

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             L   M E  +AP+ I + ++++G  +  K ++V E   +M  K   P+    +++++
Sbjct: 450 LQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIE 508



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 110/328 (33%), Positives = 178/328 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+I GLCK+    +A     +M  +   PD  TYN++I G C  +   EA  L
Sbjct: 253 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 312

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             + + +G  P  VT+  +++ LC  G ++ A  L +    + ++P+   Y++L+ G CL
Sbjct: 313 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 372

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G I  A ++   M   GC  D  +YNI+ING CK   + +A  +  + + KG  P V T
Sbjct: 373 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 432

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +NTL  G  +  +++ AL+L E M    +A DT TYN+ ++GLCK G + E  E F+ + 
Sbjct: 433 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 492

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +  C  +   YN LI+  C+S ++E A ++   + +  L  D V++N +I+G C +G ++
Sbjct: 493 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 552

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            A+ LF  +EE   +     F TLI  F
Sbjct: 553 GAYLLFQKLEEKGYSATADTFNTLIGAF 580



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/346 (33%), Positives = 177/346 (51%), Gaps = 1/346 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  TYN  I GLC+ G + +A  L   M+   + PDVVTYN+LI GLC  +   EA    
Sbjct: 220 NLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYL 278

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             MM+QG  P   T+N I+D  CK   + EA+ LL   V +   P+  TY +L++G C  
Sbjct: 279 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 338

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G + RA ELF   ++ G K D V YN L+ G C    +  AL +  EM  +G  P + TY
Sbjct: 339 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 398

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N +  GL ++  +  A  +  +        D  T+NT IDG CK   +  A++L   +  
Sbjct: 399 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 458

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D   YN +++GLCK+G++    E F+ +  +    + +TYNI+I   C   +M++
Sbjct: 459 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 518

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           A  + + M +  + P+ + F TLI+GF R         L  K++EK
Sbjct: 519 ASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 564



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 193/352 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY ++I+GLC EG V++A  LF + + + I PD+V YNSL+ GLC       A ++
Sbjct: 323 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQV 382

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM ++G  P + T+N++++ LCK G + +A+ +++  + +   P+ FT++TL+DG+C 
Sbjct: 383 MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 442

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K++ A +L   M   G   D ++YN ++NG CK  +V E    ++EM+ KG  P  +T
Sbjct: 443 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 502

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L       +++E A K+  +M ++ +  D  ++NT I G C+NG +  A  LF+ L 
Sbjct: 503 YNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLE 562

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                     +N LI        + +A ++F  +  +   AD  TY ++I G C    +D
Sbjct: 563 EKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVD 622

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A+   ++M +    P++  F  +I+     ++  + + ++H M +  V+P+
Sbjct: 623 RAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPE 674



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 156/334 (46%), Gaps = 33/334 (9%)

Query: 75  FEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           FE MD     P+   +N IMD L      D+A ++   M+   V P+  T++  +  FCL
Sbjct: 73  FERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCL 132

Query: 134 TGKINRAEELFGSMESMGC---------------KHDD----------------VSYNIL 162
           T + + A  L  ++   G                 HD                  ++N +
Sbjct: 133 TARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKV 192

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           ++  CK  +V EA  L  +++ +G+   + TYN    GL E  ++  A++L + M R   
Sbjct: 193 LHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYA 251

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
             D  TYNT I GLCK     EA+   R +    C  D   YN +IDG CK   ++ A E
Sbjct: 252 VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATE 311

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           L +    +  V D VTY  +I+GLC +G +++A +LF + +   + P+++++ +L+ G  
Sbjct: 312 LLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLC 371

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                   ++++++M E+   PD    ++V++ L
Sbjct: 372 LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 405



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 94/181 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN +TYN +I+  C+   +++A  + ++M  E ++PD V++N+LI+G C   D   A 
Sbjct: 496 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAY 555

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF ++ ++G   +  TFN ++        M  A ++ D M+ +  R +++TY  L+DG 
Sbjct: 556 LLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGS 615

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C T  ++RA      M   G      ++  +IN    N  V +A+ +   MV  G+ P V
Sbjct: 616 CKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 675

Query: 192 V 192
           V
Sbjct: 676 V 676


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 201/398 (50%), Gaps = 35/398 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + N + +NT+++G+CK G ++KA  +  +M  + + PD  TY+ LI G C   +   A  
Sbjct: 352 EANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFE 411

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  + + P+V+T++VI++ LC+ G +   + +L  MV   ++PNA  Y+TLM    
Sbjct: 412 LLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHA 471

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  +  +   M   G   D   YN LI G+CK K +EEA +   EM+ + ++P   
Sbjct: 472 KEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAH 531

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY     G  +  ++E A + F EM    V  +   Y   I+G CK G + EA  +FR +
Sbjct: 532 TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 591

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV------------------- 293
              +   D+Q Y+ LI GL ++G++  A  +F  L  + L+                   
Sbjct: 592 LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV 651

Query: 294 ----------------ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
                            D+VTYNI+I GLC  G++++A +LF D+E   + PN + +  +
Sbjct: 652 DKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAM 711

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
           + G+ +   P+   +LL +M  + V PDA I +++++ 
Sbjct: 712 VDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNF 749



 Score =  210 bits (534), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 191/362 (52%), Gaps = 1/362 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V Y T++    KEG V++++ +  +M+ + I PDV  YNSLI G C A    EA+ 
Sbjct: 457 KPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEART 516

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              EM+++ ++P+  T+   +D   K G+M+ A R  + M+   V PN   Y+ L++G C
Sbjct: 517 YLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHC 576

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  +F  + S     D  +Y++LI+G  +N ++ EA  ++ E+  KG+ P   
Sbjct: 577 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 636

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  G  +   V+ A +L EEM    +  D  TYN  IDGLCK G I  A  LF  +
Sbjct: 637 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 696

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +   Y  ++DG CKS     A +L   +  R +  D   YN++++  C + + 
Sbjct: 697 EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKF 756

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +KA DLF +M E   A + + F TLI G+ +  K  +   LL +M EK+ +P+    + +
Sbjct: 757 EKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSL 815

Query: 373 VD 374
           +D
Sbjct: 816 ID 817



 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 192/362 (53%), Gaps = 1/362 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TY   IDG  K G ++ A   F +M    + P+V  Y +LI G C   +  EA  
Sbjct: 527 RPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFS 586

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  ++ + V   V T++V++  L +NGKM EA  +   + ++ + PNAFTY++L+ G C
Sbjct: 587 VFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSC 646

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +++A +L   M   G   D V+YNILI+G CK  E+E A +L+ ++  +G+ P  V
Sbjct: 647 KQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCV 706

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  +  G  +      A +L EEM    V  D   YN  ++  CK     +A++LF+ +
Sbjct: 707 TYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM 766

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            + K      ++N LI+G CKSG+L+ A  L   +  +  + + VTY  +I   C  G M
Sbjct: 767 -LEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMM 825

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  L+L+M+E  V P    + +L+HG+  I   S+V  L  +M  K + PD     ++
Sbjct: 826 GEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVM 885

Query: 373 VD 374
           +D
Sbjct: 886 ID 887



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 209/441 (47%), Gaps = 72/441 (16%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE G  C PN VTYN II GLC+   +D+A  L   M  + + PD+ TY+ LI+G C   
Sbjct: 242 GEKG--CSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEK 299

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
              EAK +  EM+D G++P  +T+N ++D   + G +++A R+ D MV   +  N   ++
Sbjct: 300 RSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWN 359

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL------- 178
           TL++G C  GK+ +A E+   M   G + D  +Y++LI G+C+ + +  A  L       
Sbjct: 360 TLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR 419

Query: 179 ----------------------------YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
                                        REMV  G+KP  V Y TL     +  +VE +
Sbjct: 420 KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEES 479

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCK-------NGYIVEAVEL-----FRTLG----- 253
             + E M+   +  D   YN+ I G CK         Y++E +E        T G     
Sbjct: 480 RMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDG 539

Query: 254 ----------------ILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
                           +L C +  ++  Y  LI+G CK G +  A  +FR +  R ++ D
Sbjct: 540 YSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 599

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           V TY+++IHGL  +G+M +A  +F +++E  + PN   + +LI G  +     K  +LL 
Sbjct: 600 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 659

Query: 356 KMKEKKVMPDASIVSMVVDLL 376
           +M  K + PD    ++++D L
Sbjct: 660 EMCIKGINPDIVTYNILIDGL 680



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 181/359 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  +TY+ II+GLC+ G +    A+  +M    + P+ V Y +L+          E++ +
Sbjct: 423 PTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMI 482

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M +QG+ P V  +N ++   CK  +M+EA   L  M++R +RPNA TY   +DG+  
Sbjct: 483 LERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSK 542

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A+  F  M S G   +   Y  LI G+CK   V EA S++R ++S+ +   V T
Sbjct: 543 AGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT 602

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  GL    ++  A  +F E+Q   +  +  TYN+ I G CK G + +A +L   + 
Sbjct: 603 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 662

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           I     DI  YN LIDGLCK+G +E A  LF  +  R L  + VTY  M+ G C      
Sbjct: 663 IKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 722

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            A  L  +M    V P+  I+  +++   +  K  K ++L  +M EK      S  +++
Sbjct: 723 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLI 781



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 196/362 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ ++ N+++  L K   V+    +F  M    + PDV TY ++I   C   +  +AKR
Sbjct: 177 RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKR 236

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM ++G  P++VT+NVI+  LC+   +DEA  L   MV + + P+ +TY  L++GFC
Sbjct: 237 VLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFC 296

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  +   A+ +   M  +G K + ++YN LI+G+ +  ++E+A  +  EMV+ GI+  ++
Sbjct: 297 MEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLI 356

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            +NTL  G+ +  ++E AL++ +EM    V  D+ TY+  I+G C+   +  A EL   +
Sbjct: 357 IWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM 416

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K    +  Y+ +I+GLC+ G L+    + R +    L  + V Y  ++     +G++
Sbjct: 417 KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRV 476

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +++  +   M E  + P+V  + +LI GF +  +  +    L +M E+++ P+A      
Sbjct: 477 EESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAF 536

Query: 373 VD 374
           +D
Sbjct: 537 ID 538



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 187/352 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN+V ++ ++D   K GF+ +A  +FL  K     P +++ NSL+  L   N      ++
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M    V P V T+  ++   CK G + +A R+L  M ++   PN  TY+ ++ G C 
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              ++ A EL  SM   G   D  +Y+ILING+C  K   EA  +  EM+  G+KP  +T
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G      +E A ++ +EM    + A+   +NT ++G+CK G + +A+E+ + + 
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E D Q Y+ LI+G C+   +  A EL   + +R L   V+TY+++I+GLC  G + 
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 442

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             + +  +M  N + PN +++ TL+    +  +  +   +L +M+E+ ++PD
Sbjct: 443 GTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPD 494



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 189/361 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY  +I   CK G V  AK + L+M  +  +P++VTYN +I GLC A   +EA  L
Sbjct: 213 PDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIEL 272

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+D+G+ P + T++++++  C   +  EA  +L  M+   ++P   TY+ L+DGF  
Sbjct: 273 KRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMR 332

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G I +A  +   M + G + + + +N L+NG CK  ++E+AL + +EM+ KG++P   T
Sbjct: 333 QGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQT 392

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  G      +  A +L +EM++  +A    TY+  I+GLC+ G +     + R + 
Sbjct: 393 YSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMV 452

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   + +   Y  L+    K GR+E +  +   +  + ++ DV  YN +I G C   +M+
Sbjct: 453 MNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRME 512

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A    ++M E  + PN   +   I G+ +  +        ++M    V+P+  I + ++
Sbjct: 513 EARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALI 572

Query: 374 D 374
           +
Sbjct: 573 E 573



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 172/344 (50%), Gaps = 1/344 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN++I G CK+G VDKA  L  +M  + INPD+VTYN LI GLC A +   AK L
Sbjct: 633 PNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNL 692

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F ++  +G+ P+ VT+  ++D  CK+     A +LL+ M+ R V P+AF Y+ +++  C 
Sbjct: 693 FDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCK 752

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K  +A +LF  M   G     VS+N LI GYCK+ +++EA  L  EM+ K   P  VT
Sbjct: 753 EEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVT 811

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +L     +   +  A +L+ EMQ  +V     TY + + G    G + E   LF  + 
Sbjct: 812 YTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMV 871

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E D   Y  +ID  C+ G +  A +L   +  + +   V  Y+ +I  LC   +  
Sbjct: 872 AKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFF 931

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           +   L  ++ E+     +     +  GF       +  E+L  M
Sbjct: 932 EVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSM 975



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 197/395 (49%), Gaps = 39/395 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   Y  +I+G CKEG V +A ++F  +    +  DV TY+ LIHGL      +EA  +
Sbjct: 563 PNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGI 622

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E+ ++G+ P+  T+N ++   CK G +D+AS+LL+ M  + + P+  TY+ L+DG C 
Sbjct: 623 FSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCK 682

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+I RA+ LF  +E  G   + V+Y  +++GYCK+K    A  L  EM+ +G+ P    
Sbjct: 683 AGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFI 742

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +     +  + E AL LF+EM     A+ T ++NT I+G CK+G + EA  L   + 
Sbjct: 743 YNVILNFCCKEEKFEKALDLFQEMLEKGFAS-TVSFNTLIEGYCKSGKLQEANHLLEEMI 801

Query: 254 ILKCELDIQAYNCLIDGLCKSG------RLEIALE------------------------- 282
             +   +   Y  LID  CK+G      RL + ++                         
Sbjct: 802 EKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMS 861

Query: 283 ----LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
               LF  +  + +  D +TY +MI   C +G + +A  L  ++    +  +V  +  LI
Sbjct: 862 EVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALI 921

Query: 339 HGFVRINKPSKVIELLHKMKEKKV---MPDASIVS 370
               +  +  +V++LL+++ E      +P  S+++
Sbjct: 922 QALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIA 956



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 164/343 (47%), Gaps = 34/343 (9%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P+ VTYN +IDGLCK G +++AK LF  ++G  + P+ VTY +++ G C + +   A +L
Sbjct: 668  PDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQL 727

Query: 74   FFEMMDQGVQP----------------------------------SVVTFNVIMDELCKN 99
              EM+ +GV P                                  S V+FN +++  CK+
Sbjct: 728  LEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKS 787

Query: 100  GKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
            GK+ EA+ LL+ M+++   PN  TY++L+D  C  G +  A+ L+  M+         +Y
Sbjct: 788  GKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTY 847

Query: 160  NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
              L++GY     + E  +L+ EMV+KGI+P  +TY  +         V  A KL +E+  
Sbjct: 848  TSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILV 907

Query: 220  DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
              +    + Y+  I  LCK     E ++L   +G     L +   + +  G   +G ++ 
Sbjct: 908  KGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDE 967

Query: 280  ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
            A E+ RS+ +   V++  +   ++ G  N    + + +L   M
Sbjct: 968  AAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 61/118 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ +TY  +ID  C+EG V +A  L  ++  + +   V  Y++LI  LC   ++ E  +
Sbjct: 876 EPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLK 935

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           L  E+ + G +  + T +VI       G MDEA+ +L  MV+     N  +   L+DG
Sbjct: 936 LLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 993



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/220 (20%), Positives = 100/220 (45%), Gaps = 35/220 (15%)

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           + V +++L++ Y K   + EA++++    +   +P++++ N+L   L + ++VE   K+F
Sbjct: 144 NSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVF 203

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
                              DG+C +                K   D+  Y  +I   CK 
Sbjct: 204 -------------------DGMCAH----------------KVLPDVYTYTNMISAHCKV 228

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G ++ A  +   +  +    ++VTYN++I GLC    +D+A +L   M +  + P++  +
Sbjct: 229 GNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTY 288

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             LI+GF    +  +   +L +M +  + P+    + ++D
Sbjct: 289 DILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALID 328


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/354 (36%), Positives = 190/354 (53%), Gaps = 3/354 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   +N ++  LCK G V +A  L  ++    ++ ++ TYN  I GLC A    EA RL
Sbjct: 185 PNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRL 244

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M    V P VVT+N ++  LCK     EA   L  M+ +   P+ FTY+T++DG+C 
Sbjct: 245 VDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCK 303

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +  A EL       G   D V+Y  LING C   +VE AL L+ E  +KGIKP +V 
Sbjct: 304 ISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVV 363

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L  GL     + HAL++  EM  +    D  TYN  I+GLCK G I +A  +     
Sbjct: 364 YNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMND-A 422

Query: 254 ILKCEL-DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           I+K  L D+  +N LIDG CK  +L+ AL+L   +    +  D +TYN +++GLC  G++
Sbjct: 423 IMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKV 482

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           ++ ++ F +M      PN I +  LI  F R NK  +  +++ KM ++ + PDA
Sbjct: 483 NEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDA 536



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 190/359 (52%), Gaps = 1/359 (0%)

Query: 16  TVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFF 75
            V Y T++ GL   G    A+ LF QM   ++ P++  +N ++H LC   D  EA  L  
Sbjct: 152 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLG 211

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
           +++ +G+  ++ T+N+ +  LC+ G++ EA RL+D M    V P+  TY+TL+ G C   
Sbjct: 212 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKS 270

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
               A      M + GC  DD +YN +I+GYCK   V+EA  L ++ V KG  P  VTY 
Sbjct: 271 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 330

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           +L  GL     VE AL+LF E Q   +  D   YN+ + GLC  G I+ A+++   +   
Sbjct: 331 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 390

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
            C  DIQ YN +I+GLCK G +  A  +      +  + DV T+N +I G C   ++D A
Sbjct: 391 GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSA 450

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             L   M E  +AP+ I + ++++G  +  K ++V E   +M  K   P+    +++++
Sbjct: 451 LQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIE 509



 Score =  203 bits (517), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 110/328 (33%), Positives = 178/328 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+I GLCK+    +A     +M  +   PD  TYN++I G C  +   EA  L
Sbjct: 254 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 313

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             + + +G  P  VT+  +++ LC  G ++ A  L +    + ++P+   Y++L+ G CL
Sbjct: 314 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 373

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G I  A ++   M   GC  D  +YNI+ING CK   + +A  +  + + KG  P V T
Sbjct: 374 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 433

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +NTL  G  +  +++ AL+L E M    +A DT TYN+ ++GLCK G + E  E F+ + 
Sbjct: 434 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 493

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +  C  +   YN LI+  C+S ++E A ++   + +  L  D V++N +I+G C +G ++
Sbjct: 494 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 553

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            A+ LF  +EE   +     F TLI  F
Sbjct: 554 GAYLLFQKLEEKGYSATADTFNTLIGAF 581



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/346 (33%), Positives = 177/346 (51%), Gaps = 1/346 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  TYN  I GLC+ G + +A  L   M+   + PDVVTYN+LI GLC  +   EA    
Sbjct: 221 NLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYL 279

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             MM+QG  P   T+N I+D  CK   + EA+ LL   V +   P+  TY +L++G C  
Sbjct: 280 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 339

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G + RA ELF   ++ G K D V YN L+ G C    +  AL +  EM  +G  P + TY
Sbjct: 340 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 399

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N +  GL ++  +  A  +  +        D  T+NT IDG CK   +  A++L   +  
Sbjct: 400 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 459

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D   YN +++GLCK+G++    E F+ +  +    + +TYNI+I   C   +M++
Sbjct: 460 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 519

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           A  + + M +  + P+ + F TLI+GF R         L  K++EK
Sbjct: 520 ASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 565



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 193/352 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY ++I+GLC EG V++A  LF + + + I PD+V YNSL+ GLC       A ++
Sbjct: 324 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQV 383

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM ++G  P + T+N++++ LCK G + +A+ +++  + +   P+ FT++TL+DG+C 
Sbjct: 384 MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 443

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K++ A +L   M   G   D ++YN ++NG CK  +V E    ++EM+ KG  P  +T
Sbjct: 444 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 503

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L       +++E A K+  +M ++ +  D  ++NT I G C+NG +  A  LF+ L 
Sbjct: 504 YNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLE 563

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                     +N LI        + +A ++F  +  +   AD  TY ++I G C    +D
Sbjct: 564 EKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVD 623

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A+   ++M +    P++  F  +I+     ++  + + ++H M +  V+P+
Sbjct: 624 RAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPE 675



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 156/334 (46%), Gaps = 33/334 (9%)

Query: 75  FEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           FE MD     P+   +N IMD L      D+A ++   M+   V P+  T++  +  FCL
Sbjct: 74  FERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCL 133

Query: 134 TGKINRAEELFGSMESMGC---------------KHDD----------------VSYNIL 162
           T + + A  L  ++   G                 HD                  ++N +
Sbjct: 134 TARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKV 193

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           ++  CK  +V EA  L  +++ +G+   + TYN    GL E  ++  A++L + M R   
Sbjct: 194 LHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYA 252

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
             D  TYNT I GLCK     EA+   R +    C  D   YN +IDG CK   ++ A E
Sbjct: 253 VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATE 312

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           L +    +  V D VTY  +I+GLC +G +++A +LF + +   + P+++++ +L+ G  
Sbjct: 313 LLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLC 372

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                   ++++++M E+   PD    ++V++ L
Sbjct: 373 LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 406



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 94/181 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN +TYN +I+  C+   +++A  + ++M  E ++PD V++N+LI+G C   D   A 
Sbjct: 497 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAY 556

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF ++ ++G   +  TFN ++        M  A ++ D M+ +  R +++TY  L+DG 
Sbjct: 557 LLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGS 616

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C T  ++RA      M   G      ++  +IN    N  V +A+ +   MV  G+ P V
Sbjct: 617 CKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 676

Query: 192 V 192
           V
Sbjct: 677 V 677


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 203/403 (50%), Gaps = 37/403 (9%)

Query: 10  VVC--KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           V C  + N + +NT+++G+CK G ++KA  +  +M  + + PD  TY+ LI G C   + 
Sbjct: 338 VACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNM 397

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A  L  EM  + + P+V+T++VI++ LC+ G +   + +L  MV   ++PNA  Y+TL
Sbjct: 398 ARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTL 457

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           M      G++  +  +   M   G   D   YN LI G+CK K +EEA +   EM+ + +
Sbjct: 458 MTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRL 517

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P   TY     G  +  ++E A + F EM    V  +   Y   I+G CK G + EA  
Sbjct: 518 RPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFS 577

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV-------------- 293
           +FR +   +   D+Q Y+ LI GL ++G++  A  +F  L  + L+              
Sbjct: 578 VFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSC 637

Query: 294 ---------------------ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
                                 D+VTYNI+I GLC  G++++A +LF D+E   + PN +
Sbjct: 638 KQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCV 697

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
            +  ++ G+ +   P+   +LL +M  + V PDA I +++++ 
Sbjct: 698 TYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNF 740



 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 191/362 (52%), Gaps = 1/362 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V Y T++    KEG V++++ +  +M+ + I PDV  YNSLI G C A    EA+ 
Sbjct: 448 KPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEART 507

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              EM+++ ++P+  T+   +D   K G+M+ A R  + M+   V PN   Y+ L++G C
Sbjct: 508 YLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHC 567

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  +F  + S     D  +Y++LI+G  +N ++ EA  ++ E+  KG+ P   
Sbjct: 568 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 627

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  G  +   V+ A +L EEM    +  D  TYN  IDGLCK G I  A  LF  +
Sbjct: 628 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 687

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +   Y  ++DG CKS     A +L   +  R +  D   YN++++  C + + 
Sbjct: 688 EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKF 747

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +KA DLF +M E   A + + F TLI G+ +  K  +   LL +M EK+ +P+    + +
Sbjct: 748 EKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSL 806

Query: 373 VD 374
           +D
Sbjct: 807 ID 808



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 196/371 (52%), Gaps = 4/371 (1%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           I V  KP  +TYN +IDG  ++G +++A  +  +M    I  +++ +N+L++G+C A   
Sbjct: 303 IDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKM 362

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            +A  +  EMM++GV+P   T++++++  C+   M  A  LLD M +R + P   TYS +
Sbjct: 363 EKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVI 422

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++G C  G +     +   M   G K + V Y  L+  + K   VEE+  +   M  +GI
Sbjct: 423 INGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGI 482

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P V  YN+L +G  +  ++E A     EM    +  +  TY  FIDG  K G +  A  
Sbjct: 483 LPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADR 542

Query: 248 LFRTLGILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            F  +  L C +  ++  Y  LI+G CK G +  A  +FR +  R ++ DV TY+++IHG
Sbjct: 543 YFNEM--LSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHG 600

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           L  +G+M +A  +F +++E  + PN   + +LI G  +     K  +LL +M  K + PD
Sbjct: 601 LSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPD 660

Query: 366 ASIVSMVVDLL 376
               ++++D L
Sbjct: 661 IVTYNILIDGL 671



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 192/362 (53%), Gaps = 1/362 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TY   IDG  K G ++ A   F +M    + P+V  Y +LI G C   +  EA  
Sbjct: 518 RPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFS 577

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  ++ + V   V T++V++  L +NGKM EA  +   + ++ + PNAFTY++L+ G C
Sbjct: 578 VFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSC 637

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +++A +L   M   G   D V+YNILI+G CK  E+E A +L+ ++  +G+ P  V
Sbjct: 638 KQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCV 697

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  +  G  +      A +L EEM    V  D   YN  ++  CK     +A++LF+ +
Sbjct: 698 TYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM 757

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            + K      ++N LI+G CKSG+L+ A  L   +  +  + + VTY  +I   C  G M
Sbjct: 758 -LEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMM 816

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  L+L+M+E  V P    + +L+HG+  I   S+V  L  +M  K + PD     ++
Sbjct: 817 GEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVM 876

Query: 373 VD 374
           +D
Sbjct: 877 ID 878



 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 181/359 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  +TY+ II+GLC+ G +    A+  +M    + P+ V Y +L+          E++ +
Sbjct: 414 PTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMI 473

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M +QG+ P V  +N ++   CK  +M+EA   L  M++R +RPNA TY   +DG+  
Sbjct: 474 LERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSK 533

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A+  F  M S G   +   Y  LI G+CK   V EA S++R ++S+ +   V T
Sbjct: 534 AGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT 593

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  GL    ++  A  +F E+Q   +  +  TYN+ I G CK G + +A +L   + 
Sbjct: 594 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 653

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           I     DI  YN LIDGLCK+G +E A  LF  +  R L  + VTY  M+ G C      
Sbjct: 654 IKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 713

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            A  L  +M    V P+  I+  +++   +  K  K ++L  +M EK      S  +++
Sbjct: 714 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLI 772



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 178/330 (53%), Gaps = 1/330 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   Y  +I+G CKEG V +A ++F  +    +  DV TY+ LIHGL      +EA  +
Sbjct: 554 PNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGI 613

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E+ ++G+ P+  T+N ++   CK G +D+AS+LL+ M  + + P+  TY+ L+DG C 
Sbjct: 614 FSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCK 673

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+I RA+ LF  +E  G   + V+Y  +++GYCK+K    A  L  EM+ +G+ P    
Sbjct: 674 AGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFI 733

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +     +  + E AL LF+EM     A+ T ++NT I+G CK+G + EA  L   + 
Sbjct: 734 YNVILNFCCKEEKFEKALDLFQEMLEKGFAS-TVSFNTLIEGYCKSGKLQEANHLLEEMI 792

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +   +   Y  LID  CK+G +  A  L+  +  R ++    TY  ++HG  N G M 
Sbjct: 793 EKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMS 852

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           +   LF +M    + P+ + +  +I  + R
Sbjct: 853 EVSALFEEMVAKGIEPDKMTYYVMIDAYCR 882



 Score =  174 bits (441), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 192/378 (50%), Gaps = 17/378 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN+V ++ ++D   K GF+ +A  +FL  K     P +++ NSL+  L   N      ++
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNG----------KMDEASRLLD-------LMVQRD 116
           F  M    V P V T+  ++   CK G          +M E +RLLD        MV + 
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKG 271

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           + P+ +TY  L++GFC+  +   A+ +   M  +G K + ++YN LI+G+ +  ++E+A 
Sbjct: 272 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAF 331

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            +  EMV+ GI+  ++ +NTL  G+ +  ++E AL++ +EM    V  D+ TY+  I+G 
Sbjct: 332 RIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGH 391

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           C+   +  A EL   +   K    +  Y+ +I+GLC+ G L+    + R +    L  + 
Sbjct: 392 CRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNA 451

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           V Y  ++     +G+++++  +   M E  + P+V  + +LI GF +  +  +    L +
Sbjct: 452 VVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLME 511

Query: 357 MKEKKVMPDASIVSMVVD 374
           M E+++ P+A      +D
Sbjct: 512 MLERRLRPNAHTYGAFID 529



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 187/379 (49%), Gaps = 17/379 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ ++ N+++  L K   V+    +F  M    + PDV TY ++I   C   +  +AKR
Sbjct: 186 RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKR 245

Query: 73  LFFEM-----------------MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           +  EM                 +D+G+ P + T++++++  C   +  EA  +L  M+  
Sbjct: 246 VLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDV 305

Query: 116 DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
            ++P   TY+ L+DGF   G I +A  +   M + G + + + +N L+NG CK  ++E+A
Sbjct: 306 GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKA 365

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
           L + +EM+ KG++P   TY+ L  G      +  A +L +EM++  +A    TY+  I+G
Sbjct: 366 LEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIING 425

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           LC+ G +     + R + +   + +   Y  L+    K GR+E +  +   +  + ++ D
Sbjct: 426 LCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPD 485

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           V  YN +I G C   +M++A    ++M E  + PN   +   I G+ +  +        +
Sbjct: 486 VFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFN 545

Query: 356 KMKEKKVMPDASIVSMVVD 374
           +M    V+P+  I + +++
Sbjct: 546 EMLSCGVLPNVGIYTALIE 564



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 166/357 (46%), Gaps = 56/357 (15%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN++I G CK+G VDKA  L  +M  + INPD+VTYN LI GLC A +   AK L
Sbjct: 624 PNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNL 683

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS-------- 125
           F ++  +G+ P+ VT+  ++D  CK+     A +LL+ M+ R V P+AF Y+        
Sbjct: 684 FDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCK 743

Query: 126 --------------------------TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
                                     TL++G+C +GK+  A  L   M       + V+Y
Sbjct: 744 EEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTY 803

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
             LI+  CK   + EA  L+ EM  + + PT  TY +L  G   I  +     LFEEM  
Sbjct: 804 TSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVA 863

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVEL--------------FRTLGILKCELDIQAYN 265
             +  D  TY   ID  C+ G ++EA +L              FR LG+  C +      
Sbjct: 864 KGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFR-LGLPTCSV------ 916

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
            +  G   +G ++ A E+ RS+ +   V++  +   ++ G  N    + + +L   M
Sbjct: 917 -IARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 170/337 (50%), Gaps = 17/337 (5%)

Query: 46  NINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA 105
           N +P+ V ++ L+          EA  +F    +   +PS+++ N ++ +L K  K++  
Sbjct: 149 NGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELF 208

Query: 106 SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE-----------------ELFGSME 148
            ++ D M    V P+ +TY+ ++   C  G +  A+                 EL  SM 
Sbjct: 209 WKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMV 268

Query: 149 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 208
             G   D  +Y+ILING+C  K   EA  +  EM+  G+KP  +TYN L  G      +E
Sbjct: 269 DKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIE 328

Query: 209 HALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLI 268
            A ++ +EM    + A+   +NT ++G+CK G + +A+E+ + +     E D Q Y+ LI
Sbjct: 329 QAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLI 388

Query: 269 DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVA 328
           +G C+   +  A EL   + +R L   V+TY+++I+GLC  G +   + +  +M  N + 
Sbjct: 389 EGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLK 448

Query: 329 PNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           PN +++ TL+    +  +  +   +L +M+E+ ++PD
Sbjct: 449 PNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPD 485


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 118/362 (32%), Positives = 193/362 (53%), Gaps = 2/362 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  +TYNT+I G CK G + +A  +F  M    + P+V TY  LI GLC      EA +L
Sbjct: 280 PCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+ +  +P+VVT+N+I+++LCK+  + +A  +++LM +R  RP+  TY++L+ G C 
Sbjct: 340 LNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCA 399

Query: 134 TGKINRAEELFGSM--ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            G ++ A +L   M  +S     D +S+N LI+G CK   + +AL +Y  +V K     +
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDI 459

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT N L     +   V  A++L++++    +  ++ TY T IDG CK G +  A  L   
Sbjct: 460 VTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCK 519

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + + +    +  YNCL+  LCK G L+ A  LF  + R     DV+++NIMI G    G 
Sbjct: 520 MRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGD 579

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +  A  L + M    ++P++  +  LI+ F+++    + I    KM +    PDA I   
Sbjct: 580 IKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDS 639

Query: 372 VV 373
           V+
Sbjct: 640 VL 641



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 199/362 (54%), Gaps = 2/362 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N   YN ++ GLC+     KA +L  +M+  ++ PDVV+YN++I G C   +  +A +L 
Sbjct: 141 NVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLA 200

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM   G   S+VT+ +++D  CK GKMDEA  LL  M  + +  +   Y++L+ GFC  
Sbjct: 201 NEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDC 260

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+++R + LF  +   G     ++YN LI G+CK   ++EA  ++  M+ +G++P V TY
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTY 320

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  GL  + + + AL+L   M + D   +  TYN  I+ LCK+  + +A+E+   +  
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKK 380

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA--DVVTYNIMIHGLCNDGQM 312
            +   D   YN L+ GLC  G L+ A +L   + +       DV+++N +IHGLC   ++
Sbjct: 381 RRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRL 440

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A D++  + E   A +++    L++  ++    +K +EL  ++   K++P++   + +
Sbjct: 441 HQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTM 500

Query: 373 VD 374
           +D
Sbjct: 501 ID 502



 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 190/368 (51%), Gaps = 2/368 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C  + VT+  +ID  CK G +D+A  L  +MK + +  D++ Y SLI G C   + +
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELD 264

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
             K LF E++++G  P  +T+N ++   CK G++ EAS + + M++R VRPN +TY+ L+
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLI 324

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C  GK   A +L   M     + + V+YNI+IN  CK+  V +AL +   M  +  +
Sbjct: 325 DGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTR 384

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS--TYNTFIDGLCKNGYIVEAV 246
           P  +TYN+L  GL     ++ A KL   M +D    D    ++N  I GLCK   + +A+
Sbjct: 385 PDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQAL 444

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +++  L       DI   N L++   KSG +  A+EL++ +    +V +  TY  MI G 
Sbjct: 445 DIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGF 504

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C  G ++ A  L   M  + + P+V  +  L+    +     +   L  +M+     PD 
Sbjct: 505 CKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDV 564

Query: 367 SIVSMVVD 374
              ++++D
Sbjct: 565 ISFNIMID 572



 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 115/355 (32%), Positives = 191/355 (53%), Gaps = 6/355 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+YNT+I G C+   ++KA  L  +M+G   +  +VT+  LI   C A   +EA  L
Sbjct: 175 PDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGL 234

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G++  ++ +  ++   C  G++D    L D +++R   P A TY+TL+ GFC 
Sbjct: 235 LKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A E+F  M   G + +  +Y  LI+G C   + +EAL L   M+ K  +P VVT
Sbjct: 295 LGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVT 354

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +   L +   V  AL++ E M++     D  TYN+ + GLC  G + EA +L   + 
Sbjct: 355 YNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLM- 413

Query: 254 ILK----CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
            LK     + D+ ++N LI GLCK  RL  AL+++  L  ++   D+VT NI+++     
Sbjct: 414 -LKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKS 472

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G ++KA +L+  +  + + PN   + T+I GF +    +    LL KM+  ++ P
Sbjct: 473 GDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPP 527



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 158/294 (53%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+ +G   +V  +N+++  LC+N +  +A  LL  M Q  + P+  +Y+T++ GFC   +
Sbjct: 133 MLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKE 192

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           + +A +L   M+  GC    V++ ILI+ +CK  +++EA+ L +EM  KG++  ++ Y +
Sbjct: 193 LEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTS 252

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G  +  +++    LF+E+     +    TYNT I G CK G + EA E+F  +    
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERG 312

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              ++  Y  LIDGLC  G+ + AL+L   + ++    +VVTYNI+I+ LC D  +  A 
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADAL 372

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++   M++    P+ I + +L+ G        +  +LL+ M +     D  ++S
Sbjct: 373 EIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVIS 426



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 148/307 (48%), Gaps = 1/307 (0%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +F + +D G   S    N +M  L ++   + A      M++ D   N  + S L++
Sbjct: 57  AVSVFQQAVDSGGSLSFAG-NNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLE 115

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            F    K   A  +   M   G   +  +YNIL+ G C+N E  +A+SL REM    + P
Sbjct: 116 CFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMP 175

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VV+YNT+  G  E  ++E AL+L  EMQ    +    T+   ID  CK G + EA+ L 
Sbjct: 176 DVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLL 235

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + +     E D+  Y  LI G C  G L+    LF  +  R      +TYN +I G C  
Sbjct: 236 KEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++ +A ++F  M E  V PNV  +  LI G   + K  + ++LL+ M +K   P+    
Sbjct: 296 GRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTY 355

Query: 370 SMVVDLL 376
           +++++ L
Sbjct: 356 NIIINKL 362



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 161/310 (51%), Gaps = 3/310 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKA-KALFLQMKGEN-INPDVVTYNSLIHGLCHANDWNEA 70
           +P+ +TYN+++ GLC +G +D+A K L+L +K  +  +PDV+++N+LIHGLC  N  ++A
Sbjct: 384 RPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQA 443

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             ++  ++++     +VT N++++   K+G +++A  L   +    + PN+ TY+T++DG
Sbjct: 444 LDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDG 503

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC TG +N A+ L   M           YN L++  CK   +++A  L+ EM      P 
Sbjct: 504 FCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPD 563

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V+++N +  G  +   ++ A  L   M    ++ D  TY+  I+   K GY+ EA+  F 
Sbjct: 564 VISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV-VTYNIMIHGLCND 309
            +     E D    + ++      G  +   E  + L  + +V D  +T  +M +   + 
Sbjct: 624 KMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSS 683

Query: 310 GQMDKAHDLF 319
           G MD A  L 
Sbjct: 684 GNMDIAKRLL 693



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 6/314 (1%)

Query: 55  NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
           N+L+  L  + +   A   + +M++     + V+ + +++   +  K   A  +L LM++
Sbjct: 76  NNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLK 135

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
           R    N + Y+ L+ G C   +  +A  L   M       D VSYN +I G+C+ KE+E+
Sbjct: 136 RGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           AL L  EM   G   ++VT+  L     +  +++ A+ L +EM+   + AD   Y + I 
Sbjct: 196 ALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIR 255

Query: 235 GLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
           G C  G +     LF  +   G   C +    YN LI G CK GRL+ A E+F  +  R 
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAI---TYNTLIRGFCKLGRLKEASEIFEFMMERG 312

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           +  +V TY  +I GLC  G+  +A  L   M +    PNV+ +  +I+   + +  +  +
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADAL 372

Query: 352 ELLHKMKEKKVMPD 365
           E++  MK+++  PD
Sbjct: 373 EIVELMKKRRTRPD 386


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 113/338 (33%), Positives = 189/338 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +T+N II+GLC++G + +   + ++M  +   PD VTYN+L++G C   ++++A  
Sbjct: 50  EPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALV 109

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+  G+ P+VVT+  +++ +CK G ++ A    D M  R + PN  TY+T+++GF 
Sbjct: 110 LHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFA 169

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A  +   M   G     V+YN LING+C    +EEA+ L ++MV KG+ P VV
Sbjct: 170 QQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVV 229

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y+T+  G     +++ A ++  EM    V  D  TY++ I GLC+   + EA ++F+ +
Sbjct: 230 SYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEM 289

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +K   D   Y  LI+  CK G L  AL L   + ++  + D VTYN++I+GL    + 
Sbjct: 290 LTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARS 349

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
            +A  L L +  +   P+ + + TLI     I   S V
Sbjct: 350 KEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAV 387



 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 198/412 (48%), Gaps = 50/412 (12%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+++G CKEG   +A  L  +M    ++P+VVTY SLI+ +C A + N A   
Sbjct: 86  PDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEF 145

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M  +G+ P+  T+  I++   + G +DEA R+L+ M +    P+  TY+ L++G C+
Sbjct: 146 FDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCV 205

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A  L   M   G   D VSY+ +I+G+ +N+E++ A  +  EM+ K + P  VT
Sbjct: 206 LGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVT 265

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL----- 248
           Y++L  GL E  ++  A  +F+EM    +  D  TY T I+  CK G + +A+ L     
Sbjct: 266 YSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMI 325

Query: 249 ---------------------------------------------FRTLGILKCELDIQA 263
                                                        + TL    C ++ ++
Sbjct: 326 QKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKS 385

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
              L+ G C  G ++ A ++F S+  +    +   YN++IHG C  G + KA+ L+ +M 
Sbjct: 386 AVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMV 445

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
                P+ +  + L+          ++ E++  +     + DA +  ++V++
Sbjct: 446 HVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEI 497



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 185/342 (54%), Gaps = 6/342 (1%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
            F +M+     P+VVTYN++I G C     +EA      M  +G++P+++TFN+I++ LC
Sbjct: 5   FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           ++G++ E S +L  M ++   P+  TY+TL++G+C  G  ++A  L   M   G   + V
Sbjct: 65  RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y  LIN  CK   +  A+  + +M  +G+ P   TY T+  G  +   ++ A ++  EM
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCKS 274
            R        TYN  I+G C  G + EA+ L + +   G+L    D+ +Y+ +I G  ++
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLP---DVVSYSTIISGFARN 241

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
             L+ A ++   +  + ++ D VTY+ +I GLC   ++ +A D+F +M    + P+   +
Sbjct: 242 QELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTY 301

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            TLI+ + +    +K + L  +M +K  +PDA   +++++ L
Sbjct: 302 TTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGL 343



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 161/303 (53%)

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R F EM   G  P+VVT+N ++D  CK  + DEA   L  M  + + PN  T++ +++G 
Sbjct: 4   RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++    E+   M   G   D+V+YN L+NGYCK     +AL L+ EMV  G+ P V
Sbjct: 64  CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY +L   + +   +  A++ F++M    +  +  TY T I+G  + G + EA  +   
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +        I  YN LI+G C  GR+E A+ L + +  + ++ DVV+Y+ +I G   + +
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQE 243

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A  + ++M   +V P+ + + +LI G     + ++  ++  +M   K+ PD    + 
Sbjct: 244 LDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTT 303

Query: 372 VVD 374
           +++
Sbjct: 304 LIN 306



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 140/301 (46%), Gaps = 17/301 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+Y+TII G  +   +D+A  + ++M G+++ PD VTY+SLI GLC      EA  +
Sbjct: 226 PDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDM 285

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+   + P   T+  +++  CK G +++A  L D M+Q+   P+A TY+ L++G   
Sbjct: 286 FQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNK 345

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILI---------------NGYCKNKEVEEALSL 178
             +   A  L   +         V+YN LI                G+C    ++EA  +
Sbjct: 346 QARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQV 405

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
           +  M++K  KP    YN +  G   I  V  A KL++EM   D    T T    +  L  
Sbjct: 406 FESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFT 465

Query: 239 NGYIVEAVELFRTLGILKCEL-DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
            G   E  E+   + +  C+L D +    L++   K G +++   L   + +  L+    
Sbjct: 466 EGMDGELNEVIGDI-LRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTG 524

Query: 298 T 298
           T
Sbjct: 525 T 525



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 92/165 (55%)

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
            L+ F+EM+R+    +  TYNT IDG CK     EA    R++G+   E ++  +N +I+
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           GLC+ GRL+   E+   + R+  V D VTYN +++G C +G   +A  L  +M  N ++P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           NV+ + +LI+   +    ++ +E   +M  + + P+    + +++
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIIN 166



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 2/196 (1%)

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
            L  ++EM   G  P VVTYNT+  G  ++ + + A      M    +  +  T+N  I+
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
           GLC++G + E  E+   +       D   YN L++G CK G    AL L   + R  L  
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           +VVTY  +I+ +C  G +++A + F  M    + PN   + T+I+GF +     +   +L
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 355 HKMKEKKVMPDASIVS 370
           ++M     +P  SIV+
Sbjct: 182 NEMTRSGFIP--SIVT 195



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 48/96 (50%)

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           + L  F+ + R   + +VVTYN MI G C   + D+A      M    + PN+I F  +I
Sbjct: 1   MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +G  R  +  +  E+L +M  K  +PD    + +V+
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVN 96


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 199/373 (53%), Gaps = 2/373 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G  GV   PN +T+N +I  +CK G VD A  +F  M      PDV TY +L+ GLC A+
Sbjct: 159 GAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKAD 218

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             +EA  L  EM   G  PS VTFNV+++ LCK G +   ++L+D M  +   PN  TY+
Sbjct: 219 RIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYN 278

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+ G CL GK+ +A  L   M S  C  + V+Y  +ING  K     +   +   M  +
Sbjct: 279 TLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEER 338

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G       Y+ L  GLF+  + + A++LF+EM   +   +T  Y+  IDGLC++G   EA
Sbjct: 339 GYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEA 398

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           +E+   +   +C+ +   Y+ L+ G  ++G    A+E+++ + +     + V Y+++IHG
Sbjct: 399 LEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHG 458

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM--KEKKVM 363
           LC DG++ +A  ++  M      P+V+ + ++I+G          ++L ++M  +E    
Sbjct: 459 LCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQ 518

Query: 364 PDASIVSMVVDLL 376
           PD    +++++ L
Sbjct: 519 PDVVTYNILLNAL 531



 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 199/373 (53%), Gaps = 8/373 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT+N +I+GLCK+G + +   L   M  +   P+ VTYN+LIHGLC      +A 
Sbjct: 235 CFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAI 294

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M+     P+VVT+  I++ L K G+  + +R+L LM +R    N + YS L+ G 
Sbjct: 295 SLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGL 354

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GK   A +LF  M    C+ + + Y+ +I+G C++ + +EAL +  EM +   KP  
Sbjct: 355 FKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNA 414

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY++L  G FE      A++++++M + +   +   Y+  I GLCK+G + EA+ ++  
Sbjct: 415 YTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQ 474

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL--PRRVLVADVVTYNIMIHGLCND 309
           +    C+ D+ AY  +I+GL  +G +E AL+L+  +         DVVTYNI+++ LC  
Sbjct: 475 MLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQ 534

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV-RINKPSKVIELL-----HKMKEKKVM 363
             + +A DL   M +    P+++  +  +     +++ P    E L       +K ++V+
Sbjct: 535 SSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLVVRLLKRQRVL 594

Query: 364 PDASIVSMVVDLL 376
             + IV +++  L
Sbjct: 595 GASKIVEVMLQKL 607



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 130/269 (48%), Gaps = 25/269 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ NT+ Y+ +IDGLC++G  D+A  +  +M      P+  TY+SL+ G   A + ++A 
Sbjct: 375 CELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAI 434

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            ++ +M       + V ++V++  LCK+GK+ EA  +   M+ +  +P+   Y ++++G 
Sbjct: 435 EMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGL 494

Query: 132 CLTGKINRAEELFGSM--ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
              G +  A +L+  M  +    + D V+YNIL+N  CK   +  A+ L   M+ +G  P
Sbjct: 495 SNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDP 554

Query: 190 TVVT---------------------YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
            +VT                      + L + L +  +V  A K+ E M +  +    ST
Sbjct: 555 DLVTCIIFLRTLREKLDPPQDGREFLDGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPST 614

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKC 257
           +   ++ LC    +  A++  +   IL C
Sbjct: 615 WTRVVEDLCNPKKVQAAIQ--KCWSILYC 641



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 23/156 (14%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVTYNSLIHGLCHAN 65
           +G  CKP+ V Y ++I+GL   G V+ A  L+ +M  +  +  PDVVTYN L++ LC  +
Sbjct: 476 LGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQS 535

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMD---------------------ELCKNGKMDE 104
             + A  L   M+D+G  P +VT  + +                       L K  ++  
Sbjct: 536 SISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLVVRLLKRQRVLG 595

Query: 105 ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           AS+++++M+Q+ + P   T++ +++  C   K+  A
Sbjct: 596 ASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAA 631


>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 450

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 114/345 (33%), Positives = 195/345 (56%), Gaps = 2/345 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  T N +++  C  G ++   ++  ++      P  +T+ +LI GLC     N+A  
Sbjct: 102 QPDFFTLNILMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALH 161

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +++ QG++   V++  +++ +CK G    A +L+  +  R  +PN   Y+T++D  C
Sbjct: 162 FHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALC 221

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               ++ A  LF  M + G   + VSYNI+I G+CK+K V+EAL+L++EM  K + PT+V
Sbjct: 222 KYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIV 281

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY +L  GL +  ++ +  +L +EM    + AD  TYN+ IDGLCKNG++  A+ LF  +
Sbjct: 282 TYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKM 341

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   D   +  L+DGLCK GRL+ A E+F+ L  +    DV  YN+MI+G C  G +
Sbjct: 342 KDXR--FDRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLL 399

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           ++A  +   ME+N   P+ + F  +I+     ++  K  +LLH+M
Sbjct: 400 EEALTMRSKMEDNGCIPSAVTFEIIINALFEKDENDKAEKLLHEM 444



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 186/363 (51%), Gaps = 2/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  + +N I+D          A +L  +++ + I PD  T N L++  CH    N    +
Sbjct: 68  PPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILMNCFCHMGQINFGFSV 127

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++ +G QP  +TF  ++  LC  G++++A    D ++ + ++ +  +Y TL++G C 
Sbjct: 128 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 187

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G    A +L   ++    K +   YN +I+  CK + V EA  L+ EM +KGI   VV+
Sbjct: 188 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVS 247

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  G  +   V+ AL LF+EM + ++     TY + +DGLCK+G I    EL   + 
Sbjct: 248 YNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMH 307

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+  YN LIDGLCK+G L+ A+ LF  +       D +T+ I++ GLC  G++ 
Sbjct: 308 DRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDXRF--DRLTFTILLDGLCKGGRLK 365

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A ++F D+       +V  +  +I+G+ +     + + +  KM++   +P A    +++
Sbjct: 366 DAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTFEIII 425

Query: 374 DLL 376
           + L
Sbjct: 426 NAL 428



 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 163/312 (52%), Gaps = 2/312 (0%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           VD A + F  M      P V+ +N ++        ++ A  L   +  +G+QP   T N+
Sbjct: 51  VDDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNI 110

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +M+  C  G+++    +L  +++R  +P+  T++TL+ G CL G++N+A      + + G
Sbjct: 111 LMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 170

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            K D VSY  LING CK  +   A+ L R++  +  KP V  YNT+   L +   V  A 
Sbjct: 171 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 230

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            LF EM    ++A+  +YN  I G CK+  + EA+ LF+ +        I  Y  L+DGL
Sbjct: 231 GLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGL 290

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           CKSGR+    EL   +  R + ADV+TYN +I GLC +G +D+A  LF  M++     + 
Sbjct: 291 CKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDXRF--DR 348

Query: 332 IIFVTLIHGFVR 343
           + F  L+ G  +
Sbjct: 349 LTFTILLDGLCK 360



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 124/242 (51%), Gaps = 33/242 (13%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + KPN   YNTIID LCK   V +A  LF +M  + I+ +VV+YN +I G C +   +
Sbjct: 203 GRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVD 262

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  LF EM  + + P++VT+  +MD LCK+G++     L+D M  R +  +  TY++L+
Sbjct: 263 EALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLI 322

Query: 129 DGFCLTGKINRAEELFGSMESMG-------------CKH--------------------D 155
           DG C  G ++RA  LF  M+                CK                     D
Sbjct: 323 DGLCKNGHLDRAIALFNKMKDXRFDRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLD 382

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
              YN++INGYCK   +EEAL++  +M   G  P+ VT+  +   LFE  + + A KL  
Sbjct: 383 VYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTFEIIINALFEKDENDKAEKLLH 442

Query: 216 EM 217
           EM
Sbjct: 443 EM 444



 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 157/323 (48%), Gaps = 3/323 (0%)

Query: 52  VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL 111
           + ++  +H L    +  E + L      Q +  +++   V    +     +D+A    + 
Sbjct: 4   LPFHKFLHWLHAEAEIGENRALISPQQTQSILSNLILTKVKPPSI---QNVDDAVSQFNS 60

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           M+     P    ++ ++D F      + A  L   +E  G + D  + NIL+N +C   +
Sbjct: 61  MLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILMNCFCHMGQ 120

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           +    S+  +++ +G +P  +T+ TL  GL    QV  AL   +++    +  D  +Y T
Sbjct: 121 INFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGT 180

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            I+G+CK G    A++L R +     + +++ YN +ID LCK   +  A  LF  +  + 
Sbjct: 181 LINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKG 240

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           + A+VV+YNIMI G C    +D+A +LF +M +  + P ++ + +L+ G  +  + S V 
Sbjct: 241 ISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVW 300

Query: 352 ELLHKMKEKKVMPDASIVSMVVD 374
           EL+ +M ++ +  D    + ++D
Sbjct: 301 ELIDEMHDRGIPADVITYNSLID 323



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 96/174 (55%), Gaps = 2/174 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTY +++DGLCK G +     L  +M    I  DV+TYNSLI GLC     + A  L
Sbjct: 278 PTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIAL 337

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M D   +   +TF +++D LCK G++ +A  +   ++ ++   + + Y+ +++G+C 
Sbjct: 338 FNKMKD--XRFDRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCK 395

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
            G +  A  +   ME  GC    V++ I+IN   +  E ++A  L  EM+++G+
Sbjct: 396 QGLLEEALTMRSKMEDNGCIPSAVTFEIIINALFEKDENDKAEKLLHEMIARGL 449


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 194/363 (53%), Gaps = 1/363 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C    + Y T++ GL   G    A+ LF +M   ++ PDV T+N+++H LC   D  E+ 
Sbjct: 76  CDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESG 135

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +++ +G+  +  T N+ +  LC+ G+++EA  L++ M    + P+  TY+TLM G 
Sbjct: 136 ALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAPDVVTYNTLMRGL 194

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K+  A +    M + GC  DD +YN +I+GYCK   ++EA  L ++ + KG  P  
Sbjct: 195 CKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDR 254

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY +L  GL     VE AL+LF E Q  D+  D   YN+ + GLC+ G I+ A+++   
Sbjct: 255 VTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNE 314

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  DI  YN +I+GLCK G +  A  +      +  + DV T+N MI G C   +
Sbjct: 315 MVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLK 374

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D A  L   M    +AP+ I + ++++G  +  K  +V E   +M  K   P+A   ++
Sbjct: 375 LDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNI 434

Query: 372 VVD 374
           +++
Sbjct: 435 LIE 437



 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 194/352 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY ++I+GLC EG V++A  LF + + +++ PD+V YNSL+ GLC       A ++
Sbjct: 252 PDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQV 311

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM++ G  P + T+N++++ LCK G + +A+ +++  + +   P+ FT++T++DG+C 
Sbjct: 312 MNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCK 371

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K++ A +L   M   G   D ++YN ++NG CK  + +E    + EM+ KG +P  +T
Sbjct: 372 RLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAIT 431

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L     +I+Q+E A  +   M +D +  DT ++NT I G C+NG +  A  LF+ L 
Sbjct: 432 YNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLD 491

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                     +N LI        +++A ++F  +  +    D+ TY +++ G C    +D
Sbjct: 492 EKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVD 551

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A+    +M      P++  F  +++     ++ S+ + ++H M    V+P+
Sbjct: 552 RAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPE 603



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 183/359 (50%), Gaps = 1/359 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T N  I GLC+ G +++A AL   M    I PDVVTYN+L+ GLC  +   EA +  
Sbjct: 149 NKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYL 207

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             MM+QG  P   T+N I+D  CK   + EA+ LL   + +   P+  TY +L++G C  
Sbjct: 208 RRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAE 267

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G + RA ELF   ++   K D V YN L+ G C+   +  AL +  EMV  G  P + TY
Sbjct: 268 GDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTY 327

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N +  GL ++  +  A  +  +        D  T+NT IDG CK   +  A++L   + +
Sbjct: 328 NIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWM 387

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D   YN +++GLCK+G+ +   E F  +  +    + +TYNI+I   C   Q+++
Sbjct: 388 YGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEE 447

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A  + + M ++ + P+ I F TLIHGF R         L  K+ EK     A   ++++
Sbjct: 448 ASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILI 506



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 114/361 (31%), Positives = 185/361 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT++ GLCK+  V +A     +M  +   PD  TYN++I G C  +   EA  L
Sbjct: 182 PDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATEL 241

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             + + +G  P  VT+  +++ LC  G ++ A  L +    +D++P+   Y++L+ G C 
Sbjct: 242 LKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCR 301

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G I  A ++   M   GC  D  +YNI+ING CK   + +A  +  + + KG  P V T
Sbjct: 302 QGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFT 361

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +NT+  G  +  +++ AL+L E M    +A D  TYN+ ++GLCK G   E  E F  + 
Sbjct: 362 FNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMI 421

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +  C  +   YN LI+  CK  +LE A  +   + +  LV D +++N +IHG C +G +D
Sbjct: 422 LKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLD 481

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A+ LF  ++E   +     F  LI  +          ++  +M  K   PD     ++V
Sbjct: 482 GAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLV 541

Query: 374 D 374
           D
Sbjct: 542 D 542



 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 172/363 (47%), Gaps = 1/363 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P    YN I+D L    + D+A  ++++M    + PD  T+   I   C     + A 
Sbjct: 6   CPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVAL 65

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL   + ++G     + +  ++  L  +G   +A  L D M++RDV P+  T++ ++   
Sbjct: 66  RLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHAL 125

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I  +  L   +   G   +  + NI I G C+   +EEA++L   M +  I P V
Sbjct: 126 CQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDV 184

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  GL +  +V+ A +    M       D  TYNT IDG CK   + EA EL + 
Sbjct: 185 VTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKD 244

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                   D   Y  LI+GLC  G +E ALELF     + L  D+V YN ++ GLC  G 
Sbjct: 245 AIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGL 304

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +  A  +  +M E+   P++  +  +I+G  ++   S    +++    K  +PD    + 
Sbjct: 305 ILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNT 364

Query: 372 VVD 374
           ++D
Sbjct: 365 MID 367



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 166/320 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V YN+++ GLC++G +  A  +  +M  +  +PD+ TYN +I+GLC   + ++A  
Sbjct: 286 KPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAV 345

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  + + +G  P V TFN ++D  CK  K+D A +L++ M    + P+A TY+++++G C
Sbjct: 346 VMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLC 405

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK     E F  M   GC+ + ++YNILI  +CK  ++EEA  +   M   G+ P  +
Sbjct: 406 KAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTI 465

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           ++NTL  G      ++ A  LF+++     +A   T+N  I        +  A ++F  +
Sbjct: 466 SFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEM 525

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D+  Y  L+DG CK+  ++ A      +  +  V  + T+  +++ L  + ++
Sbjct: 526 ISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRV 585

Query: 313 DKAHDLFLDMEENAVAPNVI 332
            +A  +   M    V P V+
Sbjct: 586 SEAVAIIHIMVRMGVVPEVV 605



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 143/293 (48%), Gaps = 1/293 (0%)

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           G  P+   +N IMD L      D+A ++   M+   V P+A T++  +  FC+TG+ + A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
             L  S+   GC    ++Y  ++ G   +    +A  L+ EM+ + + P V T+N +   
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
           L +   +  +  L  ++ +  ++ +  T N +I GLC+ G + EAV L  ++       D
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAP-D 183

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           +  YN L+ GLCK  +++ A +  R +  +  + D  TYN +I G C    + +A +L  
Sbjct: 184 VVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLK 243

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           D       P+ + + +LI+G        + +EL ++ + K + PD  + + +V
Sbjct: 244 DAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLV 296



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 96/181 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN +TYN +I+  CK   +++A  + ++M  + + PD +++N+LIHG C   D + A 
Sbjct: 425 CRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAY 484

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF ++ ++G   +  TFN+++        M  A ++   M+ +  +P+ +TY  L+DG 
Sbjct: 485 LLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGS 544

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    ++RA      M S G      ++  ++N    N  V EA+++   MV  G+ P V
Sbjct: 545 CKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEV 604

Query: 192 V 192
           V
Sbjct: 605 V 605



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 109/256 (42%), Gaps = 40/256 (15%)

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT------------- 193
           M+  GC     +YN +++        ++A  +Y  M+S G+ P   T             
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 194 ----------------------YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
                                 Y T+  GL+       A  LF+EM R DV  D +T+N 
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC--LIDGLCKSGRLEIALELFRSLPR 289
            +  LC+ G I+E+  L     +LK  + +  + C   I GLC+ GRLE A+ L  S+  
Sbjct: 121 VLHALCQKGDIMESGALLAK--VLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDA 178

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
            +   DVVTYN ++ GLC D ++ +A      M      P+   + T+I G+ + +   +
Sbjct: 179 YI-APDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQE 237

Query: 350 VIELLHKMKEKKVMPD 365
             ELL     K  +PD
Sbjct: 238 ATELLKDAIFKGFVPD 253


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 200/407 (49%), Gaps = 39/407 (9%)

Query: 3   NGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC 62
            G  E G    P+ V++N ++ G CK G VD AK+ F  M    + PDV +YN L+HGLC
Sbjct: 261 TGGEEFG----PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLC 316

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL-------------------------- 96
            A    EA     +M + GV+P +VT+N++ +                            
Sbjct: 317 VAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLV 376

Query: 97  ---------CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
                    C+ G ++E+ +L + M+ + ++ +  TY+ L+   C +G+I+ A  L   M
Sbjct: 377 TYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEM 436

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
           E +G K D ++Y++LI+G CK   VEEA+ LY EM SK I P     + +  GLFE   +
Sbjct: 437 EVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAI 496

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
             A   F+ + + DVA +   YN  IDG  K G I EAV  ++ +        I  +N L
Sbjct: 497 SEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSL 556

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           I G CK G+L  A++L  ++    LV   VTY  +++G C +G M    D+  +ME  A+
Sbjct: 557 IYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAI 616

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            P  I +  ++ G  +  +  + ++LL  M  + + PD    + V+ 
Sbjct: 617 KPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQ 663



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 188/352 (53%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T   +IDGLC++  +  A     +  GE   P VV++N+L+ G C     + AK  F
Sbjct: 234 NEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFF 293

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M+  G+ P V ++N+++  LC  G M+EA    + M    V P+  TY+ L +GF + 
Sbjct: 294 CMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRIL 353

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G I+ A ++   M   G   D V+Y ILI G+C+   +EE+  L  +M+S+G+K ++VTY
Sbjct: 354 GLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTY 413

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L   L +  +++ A+ L  EM+   +  D  TY+  I GLCK G + EA+EL+  +  
Sbjct: 414 TVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCS 473

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
            +   +    + +I GL + G +  A   F S+ +  +  +++ YNIMI G    G + +
Sbjct: 474 KRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGE 533

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           A   +  + E  ++P ++ F +LI+GF +  K ++ ++LL  +K   ++P +
Sbjct: 534 AVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTS 585



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 182/351 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN+   + II GL ++G + +A+  F  +   ++  +++ YN +I G     +  EA R 
Sbjct: 478 PNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRS 537

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +++++G+ P++VTFN ++   CK GK+ EA +LLD +    + P + TY+TLM+G+C 
Sbjct: 538 YKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCE 597

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++   ++   ME+   K   ++Y +++ G CK   + E++ L + M ++G+ P  +T
Sbjct: 598 EGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQIT 657

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+     + H ++ A +L  +M +  +     TYN  I+GLC  G + +A  L  TL 
Sbjct: 658 YNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQ 717

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                L   AY  +I   C  G ++ AL  F  +  R     +  Y+ +I+ LC    + 
Sbjct: 718 DQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLIT 777

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            A   F  M  + + P+  I + +++ F R   P+ V E+   M +  ++P
Sbjct: 778 DAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828



 Score =  183 bits (465), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 184/364 (50%), Gaps = 35/364 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTYN + +G    G +  A  +  +M    +NPD+VTY  LI G C   +  E+ +
Sbjct: 337 EPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFK 396

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ QG++ S+VT+ V++  LCK+G++DEA  LL  M    ++P+  TYS L+ G C
Sbjct: 397 LKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLC 456

Query: 133 LTGKINRAEELF-------------------------GSMESMGCKHDDVS--------- 158
             G +  A EL+                         G++       D V+         
Sbjct: 457 KRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEII 516

Query: 159 -YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            YNI+I+GY K   + EA+  Y++++ KGI PT+VT+N+L  G  +  ++  A+KL + +
Sbjct: 517 LYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTI 576

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
           +   +   + TY T ++G C+ G +    ++   +     +     Y  ++ GLCK GRL
Sbjct: 577 KVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRL 636

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             +++L + +  R L  D +TYN +I   C    + KA  L   M ++++ P+ + +  L
Sbjct: 637 HESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVL 696

Query: 338 IHGF 341
           I+G 
Sbjct: 697 INGL 700



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 185/382 (48%), Gaps = 35/382 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY  +I G C+ G ++++  L  +M  + +   +VTY  L+  LC +   +EA  L
Sbjct: 373 PDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVIL 432

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G++P ++T++V++  LCK G ++EA  L + M  + + PN+F  S ++ G   
Sbjct: 433 LHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFE 492

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G I+ A+  F S+       + + YNI+I+GY K   + EA+  Y++++ KGI PT+VT
Sbjct: 493 KGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVT 552

Query: 194 YNTLFLGLFEIHQVEHALKLFE-----------------------------------EMQ 218
           +N+L  G  +  ++  A+KL +                                   EM+
Sbjct: 553 FNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEME 612

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +     TY   + GLCK G + E+V+L + +       D   YN +I   CK+  L+
Sbjct: 613 AKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQ 672

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +L   + +  L    VTYN++I+GLC  G +  A  L + +++ ++    + + T+I
Sbjct: 673 KAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTII 732

Query: 339 HGFVRINKPSKVIELLHKMKEK 360
                       +   H+M E+
Sbjct: 733 KAHCAKGDVQNALVFFHQMVER 754



 Score =  160 bits (405), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 167/328 (50%), Gaps = 5/328 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND-WNEAKRL 73
           N V ++ +     +   V  A  +  +MK  N+   + TYNSL++ L H +  W+    +
Sbjct: 167 NNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWD----V 222

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + E+   GV  +  T  +++D LC+  ++ +A   L      +  P+  +++ LM GFC 
Sbjct: 223 YNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCK 282

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A+  F  M   G   D  SYNIL++G C    +EEAL    +M + G++P +VT
Sbjct: 283 MGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVT 342

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G   +  +  A K+ + M  + +  D  TY   I G C+ G I E+ +L   + 
Sbjct: 343 YNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKML 402

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +L I  Y  L+  LCKSGR++ A+ L   +    L  D++TY+++IHGLC  G ++
Sbjct: 403 SQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVE 462

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           +A +L+ +M    + PN  +   +I G 
Sbjct: 463 EAIELYEEMCSKRIYPNSFVCSAIISGL 490



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 94/177 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  +TY  ++ GLCKEG + ++  L   M    + PD +TYN++I   C A+D  +A +
Sbjct: 617 KPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQ 676

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+   +QPS VT+NV+++ LC  G + +A RLL  +  + +R     Y+T++   C
Sbjct: 677 LHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHC 736

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             G +  A   F  M   G +     Y+ +IN  CK   + +A   +  M++ GI P
Sbjct: 737 AKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPP 793



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 70/139 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTYN +I+GLC  G +  A  L + ++ ++I    V Y ++I   C   D   A  
Sbjct: 687 QPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALV 746

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F +M+++G + S+  ++ +++ LCK   + +A     +M+   + P+      +++ F 
Sbjct: 747 FFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFH 806

Query: 133 LTGKINRAEELFGSMESMG 151
            +G  N   E+F  M   G
Sbjct: 807 RSGDPNSVFEIFAMMIKCG 825


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 193/364 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TYNT+I GLC  G    A A+  +M      PDVVTY  L+   C  + + +A +
Sbjct: 155 EPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMK 214

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM D+G  P +VT+NV+++ +C+ G++D+A   L  +      PN  +Y+ ++ G C
Sbjct: 215 LLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLC 274

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +   AEEL G M   GC  + V++N+LI+  C+   VE AL +  ++   G  P  +
Sbjct: 275 TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSL 334

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YN L     +  +++ A+   + M       D  +YNT +  LC++G +  AVEL   L
Sbjct: 335 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 394

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C   + +YN +IDGL K+G+ + ALEL   +  + L  D++TY+ +  GLC + ++
Sbjct: 395 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 454

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A   F  +++  + PN +++  +I G  +  +    I+L   M     MP+ S  +++
Sbjct: 455 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 514

Query: 373 VDLL 376
           ++ L
Sbjct: 515 IEGL 518



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 190/364 (52%), Gaps = 3/364 (0%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
             C P+ + YN ++ G C  G +D A+ L  +M    + PD  TYN+LI GLC       
Sbjct: 120 AACGPDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTAN 176

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +  EM+ +   P VVT+ ++++  CK     +A +LLD M  +   P+  TY+ +++
Sbjct: 177 ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 236

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C  G+++ A E   ++ S GC+ + VSYNI++ G C  +  E+A  L  EM  KG  P
Sbjct: 237 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 296

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VVT+N L   L     VE AL++ E++ +     ++ +YN  +   CK   + +A+   
Sbjct: 297 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 356

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +    C  DI +YN L+  LC+SG +++A+EL   L  +     +++YN +I GL   
Sbjct: 357 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 416

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G+  +A +L  +M    + P++I + T+  G  R ++    I    K+++  + P+  + 
Sbjct: 417 GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLY 476

Query: 370 SMVV 373
           + ++
Sbjct: 477 NAII 480



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 106/322 (32%), Positives = 174/322 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYN +++G+C+EG VD A      +      P+ V+YN ++ GLC A  W +A+
Sbjct: 224 CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 283

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM  +G  P+VVTFN+++  LC+ G ++ A  +L+ + +    PN+ +Y+ L+  F
Sbjct: 284 ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF 343

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K+++A      M S GC  D VSYN L+   C++ EV+ A+ L  ++  KG  P +
Sbjct: 344 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 403

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++YNT+  GL +  + + AL+L  EM    +  D  TY+T   GLC+   I +A+  F  
Sbjct: 404 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 463

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +    +   YN +I GLCK      A++LF  +     + +  TY I+I GL  +G 
Sbjct: 464 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 523

Query: 312 MDKAHDLFLDMEENAVAPNVII 333
           + +A DL  ++    V    +I
Sbjct: 524 IKEARDLLDELCSRGVVRKSLI 545



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 187/365 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY  +++  CK     +A  L  +M+ +   PD+VTYN +++G+C     ++A 
Sbjct: 189 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAI 248

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                +   G +P+ V++N+++  LC   + ++A  L+  M Q+   PN  T++ L+   
Sbjct: 249 EFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFL 308

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A E+   +   GC  + +SYN L++ +CK K++++A++    MVS+G  P +
Sbjct: 309 CRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDI 368

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+YNTL   L    +V+ A++L  +++    A    +YNT IDGL K G   EA+EL   
Sbjct: 369 VSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNE 428

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DI  Y+ +  GLC+  R+E A+  F  +    +  + V YN +I GLC   +
Sbjct: 429 MVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE 488

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
              A DLF  M  N   PN   +  LI G        +  +LL ++  + V+  + I   
Sbjct: 489 THSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLINKG 548

Query: 372 VVDLL 376
            + LL
Sbjct: 549 AIRLL 553



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 175/352 (49%), Gaps = 14/352 (3%)

Query: 26  LCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPS 85
           L + G +D+A    L++ G    PD  T  +LI  L  +    EA+R+          P 
Sbjct: 75  LVRRGELDEA----LRLVGSARRPDAGTCAALIKKLSASGRTAEARRVL-----AACGPD 125

Query: 86  VVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFG 145
           V+ +N ++   C  G++D A RL+  M    V P+A+TY+TL+ G C  G+   A  +  
Sbjct: 126 VMAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLD 182

Query: 146 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 205
            M    C  D V+Y IL+   CK    ++A+ L  EM  KG  P +VTYN +  G+ +  
Sbjct: 183 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 242

Query: 206 QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYN 265
           +V+ A++  + +       +T +YN  + GLC      +A EL   +G   C  ++  +N
Sbjct: 243 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 302

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD-MEE 324
            LI  LC+ G +E ALE+   +P+     + ++YN ++H  C   +MDKA   FLD M  
Sbjct: 303 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAM-AFLDLMVS 361

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               P+++ + TL+    R  +    +ELLH++K+K   P     + V+D L
Sbjct: 362 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 413


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 123/362 (33%), Positives = 196/362 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY  +ID LC  G ++ AK LFL+MK  +  PD VTY +L+       D +  K
Sbjct: 293 CGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIK 352

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             + EM   G  P VVTF +++D LCK GK+DEA   LD+M ++ V PN  TY+TL+ G 
Sbjct: 353 EFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGL 412

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +++ A ELF SMES+G +    +Y + I+ Y K+ E  +A+  + +M + GI P +
Sbjct: 413 LRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNI 472

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V  N     L E  ++E A + F  +++  +A D  TYN  +    K G + +A++L   
Sbjct: 473 VACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSE 532

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ ++   N LID L K+ R++ A ++F+ +    L   VVTYN ++ GL  +G+
Sbjct: 533 MEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGR 592

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + +A  LF  M  +   PN I F TL+    +  +    +++L +M E    PD    + 
Sbjct: 593 VQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNT 652

Query: 372 VV 373
           V+
Sbjct: 653 VI 654



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 181/352 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY+ ++  L K   ++    L  +M+   + P++ T+   I  L  A   +EA  
Sbjct: 224 KPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYG 283

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M D G  P VVT+ V++D LC  GK++ A  L   M     +P+  TY TL+D F 
Sbjct: 284 ILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFS 343

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++  +E +  ME+ G   D V++ ILI+  CK  +V+EA      M  +G+ P + 
Sbjct: 344 DHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLH 403

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GL  +++++ AL+LF  M+   +     TY  FID   K+G   +A++ F  +
Sbjct: 404 TYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKM 463

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +I A N  +  L + GRLE A E F  L +  L  D +TYNI++      G++
Sbjct: 464 KTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRV 523

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           D A  L  +MEEN   P V+I  +LI    + ++  +  ++  +MKE K+ P
Sbjct: 524 DDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAP 575



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 179/330 (54%), Gaps = 1/330 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+  +ID LCK G VD+A      MK + + P++ TYN+LI GL   N  +EA  L
Sbjct: 365 PDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALEL 424

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   G++ +  T+ + +D   K+G+  +A +  + M    + PN    +  +     
Sbjct: 425 FNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAE 484

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A+E F  ++  G   D ++YNIL+  Y K   V++A+ L  EM   G  P VV 
Sbjct: 485 QGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVI 544

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            N+L   L++  +V+ A K+F+ M+   +A    TYNT + GL K G + EA  LF+ + 
Sbjct: 545 INSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMI 604

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  +  ++N L+D LCK+G +++AL++   +       DV+TYN +I+GL  + +++
Sbjct: 605 ADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVN 664

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            A  LF  M++  + P+ +   TL+ G ++
Sbjct: 665 YAFWLFHQMKK-VIYPDYVTLCTLLPGVIK 693



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 169/324 (52%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P+   YN++IDGL K    + A  LF +MK     PDV TYN  +  L  +    E   L
Sbjct: 786  PSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDL 845

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            + EM+ +G +P+ +T N+++  L K+  +D+A  L   ++  D  P  +TY  L+DG   
Sbjct: 846  YEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLK 905

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             G++  A++ F  M   GC  +   YNIL+NG+ K  +VE A  L+R MV +GI+P + +
Sbjct: 906  LGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKS 965

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            Y+ +   L  + +V+ AL  FEE++   +  D   YN  I+GL ++  + EA+ LF  + 
Sbjct: 966  YSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMR 1025

Query: 254  ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  D+  YN LI  L  +G +E A +++  L  + L  +V TYN +I G    G  D
Sbjct: 1026 NRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPD 1085

Query: 314  KAHDLFLDMEENAVAPNVIIFVTL 337
            +A+ ++  M      PN   F  L
Sbjct: 1086 RAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 182/364 (50%), Gaps = 2/364 (0%)

Query: 10   VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWN 68
             +C+ ++V    ++  LCK G    A  +FL++ K   I P +  YNSLI GL  A    
Sbjct: 747  TICEDDSVLI-PLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTE 805

Query: 69   EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
             A  LF++M + G  P V T+N+ +D L K+GK+ E   L + M+ R  +PN  T++ ++
Sbjct: 806  MAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVI 865

Query: 129  DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
             G   +  +++A +L+  + S        +Y  LI+G  K   +EEA   + EM+  G  
Sbjct: 866  FGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCM 925

Query: 189  PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
            P    YN L  G  +   VE A +LF  M ++ +  D  +Y+  +D LC  G + +A+  
Sbjct: 926  PNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHY 985

Query: 249  FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            F  L +   + D+  YN +I+GL +S R+E AL LF  +  R +  D+ TYN +I  L  
Sbjct: 986  FEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGI 1045

Query: 309  DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
             G +++A  ++ +++   + PNV  +  LI G      P +   +  KM      P+   
Sbjct: 1046 AGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGT 1105

Query: 369  VSMV 372
             + +
Sbjct: 1106 FAQL 1109



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 195/391 (49%), Gaps = 38/391 (9%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            C P+ +TYNT+I GL KE  V+ A  LF QMK + I PD VT  +L+ G+       +A 
Sbjct: 643  CFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK-KVIYPDYVTLCTLLPGVIKDGRIEDAF 701

Query: 72   RL---------------FFEMMDQGV------------QPSVVTFNVIMDE--------- 95
            R+               F+E +  G+              S+V   +  D+         
Sbjct: 702  RVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKF 761

Query: 96   LCKNGK-MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            LCK+GK +D  +  L L     + P+   Y++L+DG         A  LF  M++ GC  
Sbjct: 762  LCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTP 821

Query: 155  DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
            D  +YN+ ++   K+ +++E   LY EM+ +G KP  +T+N +  GL + + ++ A+ L+
Sbjct: 822  DVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLY 881

Query: 215  EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
             ++   D +    TY   IDGL K G + EA + F  +    C  +   YN L++G  K 
Sbjct: 882  YDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQ 941

Query: 275  GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            G +E A ELFR + +  +  D+ +Y+IM+  LC  G++D A   F +++ + + P+++ +
Sbjct: 942  GDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCY 1001

Query: 335  VTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
              +I+G  R  +  + + L  +M+ + + PD
Sbjct: 1002 NLMINGLGRSQRVEEALSLFDEMRNRGITPD 1032



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 193/377 (51%), Gaps = 11/377 (2%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G I   C PNT+++NT++D LCK G VD A  +  +M   N  PDV+TYN++I+GL   N
Sbjct: 602 GMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKEN 661

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR--DVRPNAFT 123
             N A  LF + M + + P  VT   ++  + K+G++++A R+    V    D    +F 
Sbjct: 662 RVNYAFWLFHQ-MKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSF- 719

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCK---HDDVSYNILINGYCKNKEVEEALSLYR 180
           +  LM G  +  +I ++  LF   ES+ C     DD     L+   CK+ +  +A +++ 
Sbjct: 720 WEDLMGGILIEAEIGQS-ILFA--ESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFL 776

Query: 181 EMV-SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
           ++  S  I P++  YN+L  GL +    E A  LF +M+      D  TYN F+D L K+
Sbjct: 777 KLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKS 836

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G I E  +L+  +    C+ +   +N +I GL KS  L+ A++L+  L          TY
Sbjct: 837 GKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTY 896

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
             +I GL   G++++A   F +M +    PN  ++  L++GF +        EL  +M +
Sbjct: 897 GPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVK 956

Query: 360 KKVMPDASIVSMVVDLL 376
           + + PD    S++VD L
Sbjct: 957 EGIRPDLKSYSIMVDCL 973



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 178/367 (48%), Gaps = 3/367 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  V  N++ID L K   VD+A  +F +MK   + P VVTYN+L+ GL       EA 
Sbjct: 538 CDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEAT 597

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M+     P+ ++FN ++D LCKNG++D A ++L  M + +  P+  TY+T++ G 
Sbjct: 598 ALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGL 657

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPT 190
               ++N A  LF  M+ +    D V+   L+ G  K+  +E+A  + +E V   G    
Sbjct: 658 IKENRVNYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHAD 716

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
              +  L  G+    ++  ++   E +  + +  D S     +  LCK+G  V+A  +F 
Sbjct: 717 GSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFL 776

Query: 251 TLGILKC-ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
            L    C    ++AYN LIDGL K+   E+A  LF  +       DV TYN+ +  L   
Sbjct: 777 KLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKS 836

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++ +  DL+ +M      PN I    +I G V+ N   K I+L + +      P     
Sbjct: 837 GKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTY 896

Query: 370 SMVVDLL 376
             ++D L
Sbjct: 897 GPLIDGL 903



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 172/360 (47%), Gaps = 8/360 (2%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           + K +  TY TI   L   G + +A     +M+      +  +Y  LIH L  +    EA
Sbjct: 152 IIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREA 211

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            +++  M+ +G++PS+ T++ +M  L K   ++    LL  M    +RPN +T++  +  
Sbjct: 212 LKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRI 271

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               GKI+ A  +   M+  GC  D V+Y +LI+  C   ++  A  L+ +M +   KP 
Sbjct: 272 LGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPD 331

Query: 191 VVTYNTLFLGLFEIHQVEHALKLF-EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VTY TL L  F  H    A+K F  EM+ D    D  T+   ID LCK G + EA   F
Sbjct: 332 RVTYITL-LDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEA---F 387

Query: 250 RTLGILKCE---LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            TL ++K +    ++  YN LI GL +  RL+ ALELF S+    L     TY + I   
Sbjct: 388 GTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYY 447

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              G+  KA   F  M+ N + PN++     ++      +  +  E  + +K+  + PDA
Sbjct: 448 GKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDA 507



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 148/305 (48%), Gaps = 7/305 (2%)

Query: 65  NDWNEAKRLFFEMMDQGVQPSVV----TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           +D N+A   F  + +    P V+    T N +++ L  + ++++   + +LM ++ ++ +
Sbjct: 100 SDPNQAFSFFNSVAEM---PRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRS 156

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY T+     + G +  A      M  +G   +  SY  LI+   K+    EAL +YR
Sbjct: 157 INTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYR 216

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            MVS+GIKP++ TY+ L + L +   +E  + L +EM+   +  +  T+   I  L + G
Sbjct: 217 RMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAG 276

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            I EA  + + +    C  D+  Y  LID LC +G+L  A ELF  +       D VTY 
Sbjct: 277 KIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYI 336

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            ++    + G +D   + + +ME +   P+V+ F  LI    ++ K  +    L  MK++
Sbjct: 337 TLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQ 396

Query: 361 KVMPD 365
            V P+
Sbjct: 397 GVAPN 401



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 140/302 (46%)

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  M  Q ++ S+ T+  I   L   G + EA   L+ M +     N ++Y  L+    
Sbjct: 144 VFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLL 203

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G    A +++  M S G K    +Y+ L+    K +++E  + L +EM S G++P + 
Sbjct: 204 KSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIY 263

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+      L    +++ A  + + M       D  TY   ID LC  G +  A ELF  +
Sbjct: 264 TFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKM 323

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D   Y  L+D     G L+   E +  +     + DVVT+ I+I  LC  G++
Sbjct: 324 KASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKV 383

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A      M++  VAPN+  + TLI G +R+N+  + +EL + M+   +   A    + 
Sbjct: 384 DEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILF 443

Query: 373 VD 374
           +D
Sbjct: 444 ID 445



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 88/152 (57%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            +P+  +Y+ ++D LC  G VD A   F ++K   ++PD+V YN +I+GL  +    EA  
Sbjct: 960  RPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALS 1019

Query: 73   LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            LF EM ++G+ P + T+N ++  L   G ++EA ++ + +  + + PN FTY+ L+ G  
Sbjct: 1020 LFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHS 1079

Query: 133  LTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
            ++G  +RA  ++  M   GC+ +  ++  L N
Sbjct: 1080 MSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPN 1111



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 6/175 (3%)

Query: 205 HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA---VELFRTLGILKCELDI 261
            +VE  + +F  MQ+  +    +TY T    L   G + EA   +E  R +G +   L+ 
Sbjct: 136 RRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFV---LNG 192

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
            +Y  LI  L KSG    AL+++R +    +   + TY+ ++  L     ++    L  +
Sbjct: 193 YSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQE 252

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           ME   + PN+  F   I    R  K  +   +L +M +    PD    ++++D L
Sbjct: 253 MESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDAL 307


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 182/362 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N VTYN +I GLC+ G V++A     +M    ++PD  TY +L++GLC  +   EAK
Sbjct: 274 CAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAK 333

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM   G++P++V +  ++D   K GK  EA  +L  M+   V+PN   Y  L+ G 
Sbjct: 334 ALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGL 393

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++ RA +L   M  +G + D  +YN L+ G+ +  + + A  L  EM + GI P V
Sbjct: 394 CKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNV 453

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +Y  +  GL +  + + A  L EEM  + +  +   Y   I G  K G I  A E    
Sbjct: 454 YSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEK 513

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D+  YN LI GL   GR+E A E +  + +R LV D  TY+ +IHG C  G 
Sbjct: 514 MTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGN 573

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           ++KA  L   M  + + PN   +  L+ G+ + N   KV  +L  M      PD  I  +
Sbjct: 574 LEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGI 633

Query: 372 VV 373
           V+
Sbjct: 634 VI 635



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 211/470 (44%), Gaps = 104/470 (22%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           I    +PN + Y+ +I GLCK G + +A  L  +M    + PD  TYN L+ G    +D 
Sbjct: 375 ISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDK 434

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS-- 125
           + A  L  EM + G+ P+V ++ ++++ LC+NG+  EA  LL+ M+   ++PNAF Y+  
Sbjct: 435 DGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPL 494

Query: 126 ---------------------------------TLMDGFCLTGKINRAEELFGSMESMGC 152
                                            +L+ G    G++  AEE +  ++  G 
Sbjct: 495 IIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGL 554

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH--- 209
             D+ +Y+ LI+GYCK   +E+A  L R+M++ G+KP   TY  L  G F+ +  E    
Sbjct: 555 VPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSS 614

Query: 210 --------------------------------ALKLFEEMQRDDVAADTSTYNTFIDGLC 237
                                           A  +  E++++ +  D   Y++ I GLC
Sbjct: 615 ILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLC 674

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           K   + +AV L   +     E  I  YN LIDG C+SG +  A  +F S+  + LV + V
Sbjct: 675 KIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCV 734

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP---------------------------- 329
           TY  +I G C +G +  A DL+ +M +  +AP                            
Sbjct: 735 TYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEM 794

Query: 330 ------NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
                 NV +F TL+HGF +  K  +  +LLH M +++++P+A  V  VV
Sbjct: 795 FNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVV 844



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 166/355 (46%), Gaps = 6/355 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T   + ++D   K G V  A  + L M    + P     N L+  L  A+      +L
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKL 230

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   G+ P V T++  ++  CK    D A ++ + M +RD   N  TY+ ++ G C 
Sbjct: 231 KGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 290

Query: 134 TGKINRAEELFGSMESM---GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +G +   EE FG  E M   G   D  +Y  L+NG CK   ++EA +L  EM   G+KP 
Sbjct: 291 SGAV---EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPN 347

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           +V Y TL  G  +  +   A  + +EM    V  +   Y+  I GLCK G +  A +L +
Sbjct: 348 IVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLK 407

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +  +    D   YN L+ G  +    + A EL   +    ++ +V +Y IMI+GLC +G
Sbjct: 408 EMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNG 467

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +  +A +L  +M    + PN  ++  LI G  +    S   E L KM +  V PD
Sbjct: 468 ESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPD 522



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 180/389 (46%), Gaps = 34/389 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN   Y  +I G  KEG +  A     +M   N++PD+  YNSLI GL       EA+ 
Sbjct: 485 KPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEE 544

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            + ++  +G+ P   T++ ++   CK G +++A +LL  M+   ++PNA TY+ L++G+ 
Sbjct: 545 YYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYF 604

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +    +   +  SM   G K D+  Y I+I    +++ +E A  +  E+   G+ P + 
Sbjct: 605 KSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLH 664

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y++L  GL +I  +E A+ L +EM ++ +      YN  IDG C++G I  A  +F ++
Sbjct: 665 IYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI 724

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM---------- 302
                  +   Y  LIDG CK+G +  A +L++ +  R +  D   YN++          
Sbjct: 725 LAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADL 784

Query: 303 ------------------------IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
                                   +HG C  G++ +   L   M +  + PN      ++
Sbjct: 785 EQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVV 844

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             F +  K  +   +  ++++KK    A+
Sbjct: 845 SEFGKAGKLGEAHRVFAELQQKKASQSAT 873



 Score =  147 bits (370), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 170/386 (44%), Gaps = 23/386 (5%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-----------------------KGENI 47
           +  P+   +  +   LC      +A  L  QM                       +  + 
Sbjct: 110 IAPPSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLASIQRAIQDTDHRSRSP 169

Query: 48  NPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR 107
           +P     + L+           A ++   M D G+ P+    N ++ +L +   M+   +
Sbjct: 170 SPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWK 229

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
           L   M    + P+ +TYST ++  C     + A+++F  M    C  ++V+YN++I+G C
Sbjct: 230 LKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLC 289

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           ++  VEEA     EMV  G+ P   TY  L  GL +  +++ A  L +EM    +  +  
Sbjct: 290 RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIV 349

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
            Y T +DG  K G   EA ++ + +     + +   Y+ LI GLCK G+L  A +L + +
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
            +  L  D  TYN ++ G       D A +L  +M  + + PNV  +  +I+G  +  + 
Sbjct: 410 IKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGES 469

Query: 348 SKVIELLHKMKEKKVMPDASIVSMVV 373
            +   LL +M  + + P+A + + ++
Sbjct: 470 KEAGNLLEEMISEGLKPNAFMYAPLI 495


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 192/368 (52%), Gaps = 2/368 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  CKPN+VT++ +IDG CK G V++   L  +M+   +  DV  Y++LI G C   D  
Sbjct: 192 GGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIE 251

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
             K LF EM+ + V P+VVT++ +M+ LCK  K  EA+++LD M    VRP+   Y+ L 
Sbjct: 252 RGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLA 311

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG    G+ + A ++   M   G + ++V+YN +ING CK   V++AL +   M  KG K
Sbjct: 312 DGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKK 371

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD--VAADTSTYNTFIDGLCKNGYIVEAV 246
           P VVTY+TL  GL  + +++ A+ L   +   +  +  D   +N  I  LCK   +  A 
Sbjct: 372 PDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAK 431

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            ++ T+       +I  YN LIDG   +G+L  ALEL++      +  +  TY ++I+GL
Sbjct: 432 RVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGL 491

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C    +  A  LF     +   P V  + TL+    R +   +   L  +M+     PD 
Sbjct: 492 CKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDV 551

Query: 367 SIVSMVVD 374
              ++++D
Sbjct: 552 VSFNIIID 559



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 199/370 (53%), Gaps = 2/370 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G   +P+ V Y  + DGL K G    A  +   M      P+ VTYN++I+GLC     +
Sbjct: 297 GCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVD 356

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD--VRPNAFTYST 126
           +A  +   M  +G +P VVT++ ++  LC  GK+DEA  LL+L++ ++  ++P+ F ++ 
Sbjct: 357 DALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNL 416

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++   C   ++  A+ ++ +M   G   + V+YNILI+GY    ++ +AL L+++ V  G
Sbjct: 417 VIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSG 476

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I P   TY  L  GL ++  +  A  LF + +        S YNT +  LC+   + +A 
Sbjct: 477 ISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQAR 536

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            LF+ +     + D+ ++N +IDG  K+G +E A EL   +    LV D +T++I+I+  
Sbjct: 537 NLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRF 596

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              GQ+D+A  L+  M      P+ ++F +L+ G+    K  KV+ +L +M +K V+ D+
Sbjct: 597 LKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDS 656

Query: 367 SIVSMVVDLL 376
            + S ++  L
Sbjct: 657 KLTSTILACL 666



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 192/365 (52%), Gaps = 2/365 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  + NT+ID L K    D   ++  +M   ++ P   + ++LI    +    + A  +
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              +M +G   +V  FN+++   C++G   +A  L  +M +  + P+  +Y+T+++G C 
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++  A+ELF  M+   CK + V+++ LI+G+CKN +VEE   L  EM   G++  V  
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFV 236

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  G      +E   +LF EM R +V  +  TY+  ++ LCK     EA ++  T+ 
Sbjct: 237 YSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMT 296

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K   D+ AY  L DGL K+GR   A+++   + +R    + VTYN +I+GLC +G++D
Sbjct: 297 GCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVD 356

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM--KEKKVMPDASIVSM 371
            A  +   M +    P+V+ + TL+ G   + K  + ++LL+ +  KE  + PD    ++
Sbjct: 357 DALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNL 416

Query: 372 VVDLL 376
           V+  L
Sbjct: 417 VIQEL 421


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 193/364 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TYNT+I GLC  G    A A+  +M      PDVVTY  L+   C  + + +A +
Sbjct: 29  EPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMK 88

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM D+G  P +VT+NV+++ +C+ G++D+A   L  +      PN  +Y+ ++ G C
Sbjct: 89  LLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLC 148

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +   AEEL G M   GC  + V++N+LI+  C+   VE AL +  ++   G  P  +
Sbjct: 149 TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSL 208

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YN L     +  +++ A+   + M       D  +YNT +  LC++G +  AVEL   L
Sbjct: 209 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 268

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C   + +YN +IDGL K+G+ + ALEL   +  + L  D++TY+ +  GLC + ++
Sbjct: 269 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 328

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A   F  +++  + PN +++  +I G  +  +    I+L   M     MP+ S  +++
Sbjct: 329 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 388

Query: 373 VDLL 376
           ++ L
Sbjct: 389 IEGL 392



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/308 (33%), Positives = 169/308 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYN +++G+C+EG VD A      +      P+ V+YN ++ GLC A  W +A+
Sbjct: 98  CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 157

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM  +G  P+VVTFN+++  LC+ G ++ A  +L+ + +    PN+ +Y+ L+  F
Sbjct: 158 ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF 217

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K+++A      M S GC  D VSYN L+   C++ EV+ A+ L  ++  KG  P +
Sbjct: 218 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 277

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++YNT+  GL +  + + AL+L  EM    +  D  TY+T   GLC+   I +A+  F  
Sbjct: 278 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 337

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +    +   YN +I GLCK      A++LF  +     + +  TY I+I GL  +G 
Sbjct: 338 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 397

Query: 312 MDKAHDLF 319
           + +A DL 
Sbjct: 398 IKEARDLL 405



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 187/357 (52%), Gaps = 3/357 (0%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           + YN ++ G C  G +D A+ L  +M    + PD  TYN+LI GLC       A  +  E
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+ +   P VVT+ ++++  CK     +A +LLD M  +   P+  TY+ +++G C  G+
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           ++ A E   ++ S GC+ + VSYNI++ G C  +  E+A  L  EM  KG  P VVT+N 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L   L     VE AL++ E++ +     ++ +YN  +   CK   + +A+     +    
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
           C  DI +YN L+  LC+SG +++A+EL   L  +     +++YN +I GL   G+  +A 
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +L  +M    + P++I + T+  G  R ++    I    K+++  + P+  + + ++
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 354



 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 173/331 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY  +++  CK     +A  L  +M+ +   PD+VTYN +++G+C     ++A 
Sbjct: 63  CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAI 122

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                +   G +P+ V++N+++  LC   + ++A  L+  M Q+   PN  T++ L+   
Sbjct: 123 EFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFL 182

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A E+   +   GC  + +SYN L++ +CK K++++A++    MVS+G  P +
Sbjct: 183 CRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDI 242

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+YNTL   L    +V+ A++L  +++    A    +YNT IDGL K G   EA+EL   
Sbjct: 243 VSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNE 302

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DI  Y+ +  GLC+  R+E A+  F  +    +  + V YN +I GLC   +
Sbjct: 303 MVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE 362

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
              A DLF  M  N   PN   +  LI G  
Sbjct: 363 THSAIDLFAYMIGNGCMPNESTYTILIEGLA 393



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 146/290 (50%), Gaps = 3/290 (1%)

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
           + +N ++   C  G++D A RL+  M    V P+A+TY+TL+ G C  G+   A  +   
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M    C  D V+Y IL+   CK    ++A+ L  EM  KG  P +VTYN +  G+ +  +
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           V+ A++  + +       +T +YN  + GLC      +A EL   +G   C  ++  +N 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LI  LC+ G +E ALE+   +P+     + ++YN ++H  C   +MDKA      M    
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             P+++ + TL+    R  +    +ELLH++K+K   P     + V+D L
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 287


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 190/365 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ +   YN +I    + G +D A  +F +MK +   PD  TY  L++ L  A    EA+
Sbjct: 96  CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             F  M+++G+ P++ T+N++MD   K G++D A  L   M +R  +P+  TY+ L+D  
Sbjct: 156 SFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDAL 215

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++  A +LF  M   GC  D  +Y+ L+NG  K+  VEEA  ++REMV +G+   +
Sbjct: 216 CSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDL 275

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YN+L   L +   ++   KL +EM R     D  ++NT +D L K      A E+F  
Sbjct: 276 VNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFAR 335

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ D+ +YN LID   + G    A ++   +     + +  TYN +IH L  DGQ
Sbjct: 336 MVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQ 395

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A  +  +ME     P+V+ +  L+    +  +  +   L  +MK+K V PD    ++
Sbjct: 396 VDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAV 455

Query: 372 VVDLL 376
            +D L
Sbjct: 456 RIDGL 460



 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 107/298 (35%), Positives = 157/298 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTYN ++D LC  G V  A+ LF +M G+  +PD  TY++L++GL  +    EA +
Sbjct: 202 QPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHK 261

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM+D+GV   +V +N ++  L K G MD   +L+  M ++   P+AF+++T+MD   
Sbjct: 262 VFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALG 321

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K + A E+F  M   GCK D +SYNILI+ Y +  +  +A  +  EMV  G  P   
Sbjct: 322 KANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETK 381

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L   L    QV+ A  + EEM+      D  TYN  +D L K G    A  LF+ +
Sbjct: 382 TYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQM 441

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
                E D  +Y   IDGL    RL+ AL LF+ +       D   Y I+I      G
Sbjct: 442 KDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAG 499



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 169/351 (48%), Gaps = 3/351 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN ++D   K G +D A  LF +MK     P VVTYN L+  LC A     A++L
Sbjct: 168 PNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKL 227

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M   G  P   T++ +++ L K+G+++EA ++   MV R V  +   Y++L+     
Sbjct: 228 FHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAK 287

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++R  +L   M   G   D  S+N +++   K  + + A  ++  MV  G KP +++
Sbjct: 288 AGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLIS 347

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L            A ++ EEM       +T TYN+ I  L  +G + EA  +   + 
Sbjct: 348 YNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEME 407

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D+  YN L+D L K G  + A  LF+ +  + +  D ++Y + I GL  D ++D
Sbjct: 408 TAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLD 467

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           +A  LF DM+      +  ++  LI    R        +L H   E + MP
Sbjct: 468 EALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKH---ESQFMP 515



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 173/351 (49%), Gaps = 4/351 (1%)

Query: 26  LCKEGFVDKAKALFLQM--KGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQ 83
           L   G +D  + L  +M  +G  + P+ +    LI      N   +A  LF +       
Sbjct: 5   LASWGILDPLETLLKEMVAEGRPLRPNTLV--KLITAYGRGNKSGDAFDLFNQAESFACS 62

Query: 84  PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEEL 143
           P+V  F  ++D L  +G+ + A  +   +VQ+  + + F Y+ L+  F  +G+++ A E+
Sbjct: 63  PTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEM 122

Query: 144 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 203
           F  M+  G + D+ +Y  L+N   K   V+EA S +  M+ +G+ P + TYN L     +
Sbjct: 123 FREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRK 182

Query: 204 IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQA 263
           + Q++ AL LF EM+R        TYN  +D LC  G +  A +LF  +    C  D   
Sbjct: 183 VGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYT 242

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
           Y+ L++GL KSGR+E A ++FR +  R +  D+V YN ++  L   G MD+   L  +M 
Sbjct: 243 YSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMS 302

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
                P+   F T++    + NKP    E+  +M E    PD    ++++D
Sbjct: 303 RKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILID 353



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 187/368 (50%), Gaps = 2/368 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G   +PNT+    +I    +      A  LF Q +    +P V  +  LI  L ++ ++ 
Sbjct: 25  GRPLRPNTLV--KLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFE 82

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A+ ++ +++ +G Q     +NV++    ++G++D A  +   M  +   P+ +TY  L+
Sbjct: 83  RAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLV 142

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +     G++  A   F +M   G   +  +YN+L++ + K  +++ AL L+ EM  +G +
Sbjct: 143 NALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQ 202

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P+VVTYN L   L    +V  A KLF +M  D  + D+ TY+T ++GL K+G + EA ++
Sbjct: 203 PSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKV 262

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           FR +      +D+  YN L+  L K+G ++   +L + + R+    D  ++N ++  L  
Sbjct: 263 FREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGK 322

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
             + D A ++F  M E+   P++I +  LI  + R    ++  ++L +M E   +P+   
Sbjct: 323 ANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKT 382

Query: 369 VSMVVDLL 376
            + ++  L
Sbjct: 383 YNSLIHWL 390



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 87/170 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+ ++YN +ID   + G   +A+ +  +M      P+  TYNSLIH L      +EA 
Sbjct: 341 CKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAF 400

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  EM   G +P VVT+N +MD L K G+   A+RL   M  + V P+  +Y+  +DG 
Sbjct: 401 AVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGL 460

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 181
               +++ A  LF  M+++GC  D   Y ILI    +  + E    L  E
Sbjct: 461 AFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHE 510



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 92/200 (46%)

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           +L +EMV++G      T   L       ++   A  LF + +    +     +   ID L
Sbjct: 16  TLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDIL 75

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
             +G    A  +++ L    C+LD  AYN LI    +SG+L+ A+E+FR +  +    D 
Sbjct: 76  VNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDE 135

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
            TY  +++ L   G++ +A   F  M E  + PN+  +  L+  F ++ +    + L  +
Sbjct: 136 YTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAE 195

Query: 357 MKEKKVMPDASIVSMVVDLL 376
           MK +   P     ++++D L
Sbjct: 196 MKRRGFQPSVVTYNILLDAL 215


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 196/364 (53%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT + ++DGLC++G   +A ALF +M    + P+ VTY + I  L      NE+  L
Sbjct: 292 PDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGL 351

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+ +GV   +V +  +MD L K GK++EA  +L   +  ++ PN  TY+ L+D  C 
Sbjct: 352 LGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCR 411

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G I+ AE++   ME      + V+++ ++NG  K   + +A    R+M   GI P VVT
Sbjct: 412 AGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVT 471

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G F+    E AL ++ +M  + V A+    ++ ++GL KNG I EA  LF+ +G
Sbjct: 472 YGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMG 531

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                LD   Y  L+DGL K+G +  AL++ + L  R L  D V YN+ I+ LC  G+  
Sbjct: 532 ERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFS 591

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD-ASIVSMV 372
           +A     +M    + P+   + T+I    R    SK ++LL++MK   + P+  +  ++V
Sbjct: 592 EAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLV 651

Query: 373 VDLL 376
           V LL
Sbjct: 652 VGLL 655



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 183/360 (50%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V Y T++D L KEG +++AK +      +NI P+ VTY  L+   C A + + A+++  +
Sbjct: 365 VMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQ 424

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M ++ V P+VVTF+ I++ L K G + +A+  +  M    + PN  TY TL+DGF     
Sbjct: 425 MEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQG 484

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
              A +++  M   G + ++   + L+NG  KN  +EEA +L+++M  +G+    V Y T
Sbjct: 485 QEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYAT 544

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  GLF+   +  ALK+ +E+   +++ D   YN FI+ LC+ G   EA    + +    
Sbjct: 545 LMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTG 604

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            E D   YN +I   C+ G    AL+L   +    +  +++TY  ++ GL   G ++KA 
Sbjct: 605 LEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAK 664

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            L  +M      P  + +  ++        P  ++E+   M    +  D ++ + +V +L
Sbjct: 665 YLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVL 724



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 184/363 (50%), Gaps = 4/363 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +TV+YN  + GL ++G    A  +  +M    +  D VT ++ + GL       EA  L 
Sbjct: 116 DTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALA 175

Query: 75  FEMMDQGVQP---SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            EM+ +G       VV +N ++D  CK   M  A  +++ M  + +  +   Y+TL+ GF
Sbjct: 176 -EMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGF 234

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
             +G  + A E+   M++ G +   V++  LI  YCK K +EEA +LY  MV  G+ P V
Sbjct: 235 FYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDV 294

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT + L  GL    +   A  LF EM +  VA +  TY TFID L K   + E++ L   
Sbjct: 295 VTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGE 354

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +      +D+  Y  ++D L K G++E A ++ R      +  + VTY +++   C  G 
Sbjct: 355 MVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGN 414

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D A  + L MEE +V+PNV+ F ++++G V+    +K    + KMK+  + P+      
Sbjct: 415 IDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGT 474

Query: 372 VVD 374
           ++D
Sbjct: 475 LID 477



 Score =  174 bits (441), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 179/358 (50%), Gaps = 2/358 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           +IGV   PN VTY T ID L K   V+++  L  +M    +  D+V Y +++  L     
Sbjct: 322 KIGVA--PNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGK 379

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             EAK +    +   + P+ VT+ V++D  C+ G +D A ++L  M ++ V PN  T+S+
Sbjct: 380 IEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSS 439

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           +++G    G I +A      M+  G   + V+Y  LI+G+ K +  E AL +YR+M+ +G
Sbjct: 440 ILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEG 499

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           ++      ++L  GL +   +E A  LF++M    +  D   Y T +DGL K G +  A+
Sbjct: 500 VEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAAL 559

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           ++ + L       D   YN  I+ LC+ G+   A    + +    L  D  TYN MI   
Sbjct: 560 KVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQ 619

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           C +G   KA  L  +M+ +++ PN+I + TL+ G +      K   LL++M      P
Sbjct: 620 CREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTP 677



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 190/395 (48%), Gaps = 35/395 (8%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V +N +IDG CK   +  A A+  +M  + ++ DVV YN+L+ G  ++ D + A  +   
Sbjct: 190 VGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAER 249

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M   GV+PSVVT   ++ E CK  +++EA  L + MV+  V P+  T S L+DG C  G+
Sbjct: 250 MKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGR 309

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG---------- 186
            + A  LF  M+ +G   + V+Y   I+   K + V E+L L  EMVS+G          
Sbjct: 310 FSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTT 369

Query: 187 -------------------------IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
                                    I P  VTY  L         ++ A ++  +M+   
Sbjct: 370 VMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKS 429

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           V+ +  T+++ ++GL K G I +A    R +       ++  Y  LIDG  K    E AL
Sbjct: 430 VSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAAL 489

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           +++R +    + A+    + +++GL  +G +++A  LF DM E  +  + + + TL+ G 
Sbjct: 490 DVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGL 549

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +       +++  ++ E+ + PDA + ++ ++ L
Sbjct: 550 FKTGNMPAALKVGQELMERNLSPDAVVYNVFINCL 584



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 186/400 (46%), Gaps = 37/400 (9%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE G++   + V Y T++DGL K G +  A  +  ++   N++PD V YN  I+ LC   
Sbjct: 531 GERGLLL--DHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLG 588

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            ++EAK    EM + G++P   T+N ++   C+ G   +A +LL+ M    ++PN  TY+
Sbjct: 589 KFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYT 648

Query: 126 TLMDGFCLTGKINRAEELFGSMESMG--------------CK------------------ 153
           TL+ G    G + +A+ L   M S G              C                   
Sbjct: 649 TLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGA 708

Query: 154 --HDDVS-YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
             H D++ YN L++  C +    +A  +  EM+ +GI P  +T+N L LG  +   +++A
Sbjct: 709 GLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNA 768

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
              + +M    ++ + +T+NT + GL   G I EA  +   +  +  E +   Y+ L+ G
Sbjct: 769 FATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTG 828

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
             K      AL L+  +  +  +    TYN +I      G M++A +LF +M+   V   
Sbjct: 829 YAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHT 888

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
              +  L++G+ ++   ++V  LL  MKE    P    +S
Sbjct: 889 SSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTIS 928



 Score =  160 bits (405), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 180/425 (42%), Gaps = 76/425 (17%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  ++D  C+ G +D A+ + LQM+ ++++P+VVT++S+++GL       +A   
Sbjct: 397 PNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGY 456

Query: 74  FFEMMDQGVQPSVVTFNVIMD-----------------------------------ELCK 98
             +M D G+ P+VVT+  ++D                                    L K
Sbjct: 457 MRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRK 516

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG---------------------------- 130
           NG ++EA  L   M +R +  +   Y+TLMDG                            
Sbjct: 517 NGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVV 576

Query: 131 -------FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
                   C  GK + A+     M + G + D  +YN +I+  C+     +AL L  EM 
Sbjct: 577 YNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMK 636

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL--CKNGY 241
              IKP ++TY TL +GL E   VE A  L  EM          TY   +      ++ Y
Sbjct: 637 WSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPY 696

Query: 242 IV-EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
           ++ E  EL    G+     DI  YN L+  LC  G    A  +   +  R +  D +T+N
Sbjct: 697 VILEVHELMMGAGL---HADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFN 753

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +I G C    +D A   +  M    ++PN+  F TL+ G     +  +   ++ +MK+ 
Sbjct: 754 ALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKM 813

Query: 361 KVMPD 365
            + P+
Sbjct: 814 GLEPN 818



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 161/370 (43%), Gaps = 51/370 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P       +I  L   G V  A + F  + G     D +T NS+I   C  +    A  L
Sbjct: 49  PPARLLRRLIPALASSGLV-AAASRFRPVPG-----DPLTLNSIILSYCSLHALRPALSL 102

Query: 74  FFEMMDQGVQPSV----VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
                  G QP V    V++N+ +  L + G    A  +L  M +R V  +  T ST + 
Sbjct: 103 LRS--SSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALV 160

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDD---VSYNILINGYCKNKEVEEALSLYREMVSKG 186
           G   TG +  A  L   M   G   D    V +N LI+GYCK +++  AL++   M ++G
Sbjct: 161 GLSRTGLVGEAAAL-AEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQG 219

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +   VV YNTL  G F     + A ++ E M+ D V     T+ T               
Sbjct: 220 LSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTT--------------- 264

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
                               LI   CK  R+E A  L+  + R  ++ DVVT + ++ GL
Sbjct: 265 --------------------LIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGL 304

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C DG+  +A+ LF +M++  VAPN + + T I    ++ + ++ + LL +M  + V  D 
Sbjct: 305 CRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDL 364

Query: 367 SIVSMVVDLL 376
            + + V+D L
Sbjct: 365 VMYTTVMDRL 374



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 113/210 (53%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G    P+T+T+N +I G CK   +D A A + QM  + ++P++ T+N+L+ GL  A   
Sbjct: 741 LGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRI 800

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA  +  EM   G++P+ +T+++++    K     EA RL   MV +   P A TY++L
Sbjct: 801 GEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSL 860

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +  F   G +N+A+ELF  M+  G  H   +Y+IL+NG+ K +   E   L ++M   G 
Sbjct: 861 ISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGF 920

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           KP+  T +++     +      A +L + +
Sbjct: 921 KPSKGTISSMSRAFSKPGMTWEARRLLKTL 950



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 115/245 (46%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G     +   YNT++  LC  G   KA  +  +M G  I PD +T+N+LI G C ++  
Sbjct: 706 MGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHL 765

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           + A   + +M+ QG+ P++ TFN ++  L   G++ EA  ++  M +  + PN  TY  L
Sbjct: 766 DNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDIL 825

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G+        A  L+  M S G      +YN LI+ + K   + +A  L+ EM  +G+
Sbjct: 826 VTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGV 885

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
             T  TY+ L  G  ++        L ++M+         T ++      K G   EA  
Sbjct: 886 LHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARR 945

Query: 248 LFRTL 252
           L +TL
Sbjct: 946 LLKTL 950


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 191/362 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  NTVTYN +I GLC+ G V++A      M+   + PD  TY +LI+GLC +   NEAK
Sbjct: 253 CGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAK 312

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM    ++P+VV +  ++D   + G  DEA +++  MV   V+PN  TY  L+ G 
Sbjct: 313 ALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGL 372

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++RA  L   M     + D ++YN++I G+ ++   ++A  L  EM + GI P V
Sbjct: 373 CKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNV 432

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY+ +  GL +  + E A  L EEM    +  +   Y   I G C+ G +  A E+F  
Sbjct: 433 YTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDK 492

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +    D+  YN LI GL K GR+E + + F  +  R L+ +  TY+ +IHG   +G 
Sbjct: 493 MTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGD 552

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           ++ A  L   M +  + PN +I++ L+  + + +   KV      M ++ VM D  I  +
Sbjct: 553 LESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGI 612

Query: 372 VV 373
           ++
Sbjct: 613 LI 614



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 197/399 (49%), Gaps = 41/399 (10%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +TY+ ++ GLCK G +D+A  L  QM  ++  PD +TYN +I G    +   +A R
Sbjct: 359 QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFR 418

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM + G+ P+V T+++++  LC++G+ ++AS LL+ M  + ++PNAF Y+ L+ G+C
Sbjct: 419 LLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 478

Query: 133 LTG--------------------------------KINRAEE---LFGSMESMGCKHDDV 157
             G                                K+ R EE    F  M+  G   ++ 
Sbjct: 479 REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEF 538

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y+ LI+GY KN ++E A  L + M+  G+KP  V Y  L    F+   +E     F+ M
Sbjct: 539 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 598

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL-GILK--CELDIQAYNCLIDGLCKS 274
               V  D   Y   I  L  +G +  A   FR L GI K     D+  Y+ LI GLCK+
Sbjct: 599 LDQGVMLDNRIYGILIHNLSSSGNMEAA---FRVLSGIEKNGSVPDVHVYSSLISGLCKT 655

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
              E A  +   + ++ +  ++V YN +I GLC  G +  A ++F  +    + PN + +
Sbjct: 656 ADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTY 715

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            +LI G  ++   S    L ++M    + PDA + S++ 
Sbjct: 716 TSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 754



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 187/358 (52%), Gaps = 3/358 (0%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           + + ++  CK    D AK + ++M+      + VTYN LI GLC +    EA     +M 
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           D G+ P   T+  +++ LCK+ + +EA  LLD M   +++PN   Y+ L+DGF   G  +
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A ++   M + G + + ++Y+ L+ G CK  +++ A  L ++MV    +P  +TYN + 
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            G F  H  + A +L  EM+   ++ +  TY+  I GLC++G   +A +L   +     +
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 464

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            +   Y  LI G C+ G + +A E+F  + +  ++ D+  YN +I GL   G+++++   
Sbjct: 465 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 524

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           F  M+E  + PN   +  LIHG+++        +L+ +M +  + P+  I    +DLL
Sbjct: 525 FAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI---YIDLL 579



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 172/369 (46%), Gaps = 25/369 (6%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V Y  +++   K   ++K  + F  M  + +  D   Y  LIH L  + +   A R
Sbjct: 569 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 628

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   +   G  P V  ++ ++  LCK    ++A  +LD M ++ V PN   Y+ L+DG C
Sbjct: 629 VLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 688

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G I+ A  +F S+ + G   + V+Y  LI+G CK  ++  A  LY EM++ GI P   
Sbjct: 689 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 748

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ L  G      +E A+ L EEM      A  S++N  +DG CK G + E ++L   +
Sbjct: 749 VYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVI 807

Query: 253 ---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV----------LVADVVTY 299
              G++   L I+    +I GL ++G+L     +F  L ++           L  D++  
Sbjct: 808 MGRGLVPNALTIEN---IISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQ 864

Query: 300 --------NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
                   + MI   C +G +DKA  L   +   +       ++ ++    R  K S+ +
Sbjct: 865 GKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEAL 924

Query: 352 ELLHKMKEK 360
            LL +M ++
Sbjct: 925 NLLKEMDKR 933



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 20/153 (13%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE-------- 69
           ++N ++DG CK G + +   L   + G  + P+ +T  ++I GL  A   +E        
Sbjct: 783 SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVEL 842

Query: 70  -------AKR----LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR 118
                  A R    LF +M++QG  P  V  ++I D  CK G +D+A  L D++V +   
Sbjct: 843 QQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDH-CKEGNLDKALMLRDVIVAKSAP 901

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
               +Y  ++D  C  GK++ A  L   M+  G
Sbjct: 902 MGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 934


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  214 bits (544), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 191/362 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  NTVTYN +I GLC+ G V++A      M+   + PD  TY +LI+GLC +   NEAK
Sbjct: 275 CGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAK 334

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM    ++P+VV +  ++D   + G  DEA +++  MV   V+PN  TY  L+ G 
Sbjct: 335 ALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGL 394

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++RA  L   M     + D ++YN++I G+ ++   ++A  L  EM + GI P V
Sbjct: 395 CKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNV 454

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY+ +  GL +  + E A  L EEM    +  +   Y   I G C+ G +  A E+F  
Sbjct: 455 YTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDK 514

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +    D+  YN LI GL K GR+E + + F  +  R L+ +  TY+ +IHG   +G 
Sbjct: 515 MTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGD 574

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           ++ A  L   M +  + PN +I++ L+  + + +   KV      M ++ VM D  I  +
Sbjct: 575 LESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGI 634

Query: 372 VV 373
           ++
Sbjct: 635 LI 636



 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 194/369 (52%), Gaps = 3/369 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G    P+  TY+T+I+  CK    D AK + ++M+      + VTYN LI GLC +   
Sbjct: 236 VGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAV 295

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA     +M D G+ P   T+  +++ LCK+ + +EA  LLD M   +++PN   Y+ L
Sbjct: 296 EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL 355

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DGF   G  + A ++   M + G + + ++Y+ L+ G CK  +++ A  L ++MV    
Sbjct: 356 IDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 415

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P  +TYN +  G F  H  + A +L  EM+   ++ +  TY+  I GLC++G   +A +
Sbjct: 416 RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 475

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +     + +   Y  LI G C+ G + +A E+F  + +  ++ D+  YN +I GL 
Sbjct: 476 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 535

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G+++++   F  M+E  + PN   +  LIHG+++        +L+ +M +  + P+  
Sbjct: 536 KVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDV 595

Query: 368 IVSMVVDLL 376
           I    +DLL
Sbjct: 596 I---YIDLL 601



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 193/396 (48%), Gaps = 35/396 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +TY+ ++ GLCK G +D+A  L  QM  ++  PD +TYN +I G    +   +A R
Sbjct: 381 QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFR 440

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM + G+ P+V T+++++  LC++G+ ++AS LL+ M  + ++PNAF Y+ L+ G+C
Sbjct: 441 LLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 500

Query: 133 LTG--------------------------------KINRAEE---LFGSMESMGCKHDDV 157
             G                                K+ R EE    F  M+  G   ++ 
Sbjct: 501 REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEF 560

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y+ LI+GY KN ++E A  L + M+  G+KP  V Y  L    F+   +E     F+ M
Sbjct: 561 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 620

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
               V  D   Y   I  L  +G +  A  +   +       D+  Y+ LI GLCK+   
Sbjct: 621 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADR 680

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           E A  +   + ++ +  ++V YN +I GLC  G +  A ++F  +    + PN + + +L
Sbjct: 681 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 740

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           I G  ++   S    L ++M    + PDA + S++ 
Sbjct: 741 IDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 776



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 175/324 (54%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           M G  I+PDV TY++LI   C   +++ AK++  EM ++G   + VT+NV++  LC++G 
Sbjct: 235 MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 294

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           ++EA      M    + P+ FTY  L++G C + + N A+ L   M     K + V Y  
Sbjct: 295 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN 354

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LI+G+ +    +EA  + +EMV+ G++P  +TY+ L  GL ++ Q++ A  L ++M RD 
Sbjct: 355 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 414

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              DT TYN  I+G  ++    +A  L   +       ++  Y+ +I GLC+SG  E A 
Sbjct: 415 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 474

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           +L   +  + L  +   Y  +I G C +G +  A ++F  M +  V P++  + +LI G 
Sbjct: 475 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 534

Query: 342 VRINKPSKVIELLHKMKEKKVMPD 365
            ++ +  +  +   +M+E+ ++P+
Sbjct: 535 SKVGRVEESTKYFAQMQERGLLPN 558



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 167/349 (47%), Gaps = 6/349 (1%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           + ++D   K G V  A  + L M+   + P +   N+L+  L  A+      ++   M+ 
Sbjct: 178 DVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVG 237

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
            G+ P V T++ +++  CK  + D A ++L  M +R    N  TY+ L+ G C +G +  
Sbjct: 238 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAV-- 295

Query: 140 AEELFG---SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
            EE FG    ME  G   D  +Y  LING CK++   EA +L  EM    +KP VV Y  
Sbjct: 296 -EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN 354

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G       + A K+ +EM    V  +  TY+  + GLCK G +  A  L + +    
Sbjct: 355 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 414

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              D   YN +I+G  +    + A  L   +    +  +V TY+IMIHGLC  G+ +KA 
Sbjct: 415 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 474

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           DL  +M    + PN  ++  LI G+ R    S   E+  KM +  V+PD
Sbjct: 475 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 523



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 155/306 (50%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            +A  +   M D+G+ PS+   N ++ +L +   M    ++ + MV   + P+ +TYSTL
Sbjct: 191 QDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTL 250

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++ +C   + + A+++   M   GC  + V+YN+LI G C++  VEEA    ++M   G+
Sbjct: 251 IEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 310

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P   TY  L  GL +  +   A  L +EM   ++  +   Y   IDG  + G   EA +
Sbjct: 311 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 370

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           + + +     + +   Y+ L+ GLCK G+++ A  L + + R     D +TYN++I G  
Sbjct: 371 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 430

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
                  A  L  +ME   ++PNV  +  +IHG  +  +P K  +LL +M  K + P+A 
Sbjct: 431 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 490

Query: 368 IVSMVV 373
           + + ++
Sbjct: 491 VYAPLI 496



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 175/373 (46%), Gaps = 25/373 (6%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V Y  +++   K   ++K  + F  M  + +  D   Y  LIH L  + +   A R
Sbjct: 591 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 650

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   +   G  P V  ++ ++  LCK    ++A  +LD M ++ V PN   Y+ L+DG C
Sbjct: 651 VLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 710

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G I+ A  +F S+ + G   + V+Y  LI+G CK  ++  A  LY EM++ GI P   
Sbjct: 711 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 770

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ L  G      +E A+ L EEM     A+  S++N  +DG CK G + E ++L   +
Sbjct: 771 VYSVLTTGCSSAGDLEQAMFLIEEMFLRGHAS-ISSFNNLVDGFCKRGKMQETLKLLHVI 829

Query: 253 ---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV----------LVADVVTY 299
              G++   L I+    +I GL ++G+L     +F  L ++           L  D++  
Sbjct: 830 MGRGLVPNALTIEN---IISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQ 886

Query: 300 --------NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
                   + MI   C +G +DKA  L   +   +       ++ ++    R  K S+ +
Sbjct: 887 GKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEAL 946

Query: 352 ELLHKMKEKKVMP 364
            LL +M ++ + P
Sbjct: 947 NLLKEMDKRGICP 959



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 163/327 (49%), Gaps = 22/327 (6%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   Y+++I GLCK    +KA  +  +M  + ++P++V YN+LI GLC + D + A+ +
Sbjct: 662 PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNV 721

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  ++ +G+ P+ VT+  ++D  CK G +  A  L + M+   + P+AF YS L  G   
Sbjct: 722 FNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSS 781

Query: 134 TGKINRAEELFGSMESMGCKHDDVS-YNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            G + +A  L   M   G  H  +S +N L++G+CK  +++E L L   ++ +G+ P  +
Sbjct: 782 AGDLEQAMFLIEEMFLRG--HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 839

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT-FIDGL--------------- 236
           T   +  GL E  ++     +F E+Q+    +    +++ F+D +               
Sbjct: 840 TIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIR 899

Query: 237 --CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
             CK G + +A+ L   +      +   +Y  ++D LC+ G+L  AL L + + +R +  
Sbjct: 900 DHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICP 959

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLD 321
                 I++  L   G + + H+  LD
Sbjct: 960 SENQCLILLTNLHTSGYIQE-HNTVLD 985


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  213 bits (543), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 192/362 (53%), Gaps = 2/362 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  +TYNT+I G CK G + +A  +F  M    + P+V TY  LI GLC      EA +L
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+++  +P+ VT+N+I+++LCK+G + +A  +++LM +R  RP+  TY+ L+ G C 
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399

Query: 134 TGKINRAEELFGSM--ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            G ++ A +L   M  +S     D +SYN LI+G CK   + +AL +Y  +V K      
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR 459

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT N L     +   V  A++L++++    +  ++ TY   IDG CK G +  A  L   
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK 519

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + + + +  +  YNCL+  LCK G L+ A  LF  + R     DVV++NIMI G    G 
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +  A  L + M    ++P++  +  LI+ F+++    + I    KM +    PDA I   
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639

Query: 372 VV 373
           V+
Sbjct: 640 VL 641



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 192/403 (47%), Gaps = 37/403 (9%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C  + VT+  +ID  CK G +D+A     +MK   +  D+V Y SLI G C   + +
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
             K LF E++++G  P  +T+N ++   CK G++ EAS + + M++R VRPN +TY+ L+
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C  GK   A +L   M     + + V+YNI+IN  CK+  V +A+ +   M  +  +
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS--TYNTFIDGLCKN------- 239
           P  +TYN L  GL     ++ A KL   M +D    D    +YN  I GLCK        
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444

Query: 240 ----------------------------GYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
                                       G + +A+EL++ +   K   +   Y  +IDG 
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           CK+G L +A  L   +    L   V  YN ++  LC +G +D+A  LF +M+ +   P+V
Sbjct: 505 CKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDV 564

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + F  +I G ++         LL  M    + PD    S +++
Sbjct: 565 VSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 196/362 (54%), Gaps = 2/362 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N   +N ++ GLC+     KA +L  +M+  ++ PDV +YN++I G C   +  +A  L 
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM   G   S+VT+ +++D  CK GKMDEA   L  M    +  +   Y++L+ GFC  
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+++R + LF  +   G     ++YN LI G+CK  +++EA  ++  M+ +G++P V TY
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  GL  + + + AL+L   M   D   +  TYN  I+ LCK+G + +AVE+   +  
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA--DVVTYNIMIHGLCNDGQM 312
            +   D   YN L+ GLC  G L+ A +L   + +       DV++YN +IHGLC + ++
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A D++  + E   A + +    L++  ++    +K +EL  ++ + K++ ++   + +
Sbjct: 441 HQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAM 500

Query: 373 VD 374
           +D
Sbjct: 501 ID 502



 Score =  183 bits (465), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 184/355 (51%), Gaps = 6/355 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +YNT+I G C+   ++KA  L  +MKG   +  +VT+  LI   C A   +EA   
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G++  +V +  ++   C  G++D    L D +++R   P A TY+TL+ GFC 
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A E+F  M   G + +  +Y  LI+G C   + +EAL L   M+ K  +P  VT
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVT 354

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +   L +   V  A+++ E M++     D  TYN  + GLC  G + EA +L   + 
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM- 413

Query: 254 ILK----CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
            LK     + D+ +YN LI GLCK  RL  AL+++  L  ++   D VT NI+++     
Sbjct: 414 -LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G ++KA +L+  + ++ +  N   +  +I GF +    +    LL KM+  ++ P
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527



 Score =  148 bits (373), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 154/294 (52%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+ +G   +V   N+++  LC+N +  +A  LL  M +  + P+ F+Y+T++ GFC   +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           + +A EL   M+  GC    V++ ILI+ +CK  +++EA+   +EM   G++  +V Y +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G  +  +++    LF+E+     +    TYNT I G CK G + EA E+F  +    
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              ++  Y  LIDGLC  G+ + AL+L   +  +    + VTYNI+I+ LC DG +  A 
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++   M++    P+ I +  L+ G        +  +LL+ M +     D  ++S
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVIS 426



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 149/307 (48%), Gaps = 1/307 (0%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +F + +D G   +    N +M +L ++   + A      M++ D   N  + S L++
Sbjct: 57  AVSVFQQAVDSGSSLAFAG-NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLE 115

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            +    K   A  +   M   G   +  ++NIL+ G C+N E  +A+SL REM    + P
Sbjct: 116 CYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMP 175

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V +YNT+  G  E  ++E AL+L  EM+    +    T+   ID  CK G + EA+   
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + +  +  E D+  Y  LI G C  G L+    LF  +  R      +TYN +I G C  
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           GQ+ +A ++F  M E  V PNV  +  LI G   + K  + ++LL+ M EK   P+A   
Sbjct: 296 GQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTY 355

Query: 370 SMVVDLL 376
           +++++ L
Sbjct: 356 NIIINKL 362



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 157/310 (50%), Gaps = 3/310 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKA-KALFLQMKGEN-INPDVVTYNSLIHGLCHANDWNEA 70
           +P+ +TYN ++ GLC +G +D+A K L+L +K  +  +PDV++YN+LIHGLC  N  ++A
Sbjct: 384 RPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQA 443

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             ++  ++++      VT N++++   K G +++A  L   +    +  N+ TY+ ++DG
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC TG +N A+ L   M     +     YN L++  CK   +++A  L+ EM      P 
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VV++N +  G  +   ++ A  L   M R  ++ D  TY+  I+   K GY+ EA+  F 
Sbjct: 564 VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN-D 309
            +     E D    + ++      G  +   EL + L  + +V D      ++  +CN  
Sbjct: 624 KMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSS 683

Query: 310 GQMDKAHDLF 319
             MD A  L 
Sbjct: 684 ANMDLAKRLL 693



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 150/314 (47%), Gaps = 6/314 (1%)

Query: 55  NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
           N+L+  L  + +   A   + +M++     + V+ + +++   +  K   A  +L LM++
Sbjct: 76  NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
           R    N + ++ L+ G C   +  +A  L   M       D  SYN +I G+C+ KE+E+
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           AL L  EM   G   ++VT+  L     +  +++ A+   +EM+   + AD   Y + I 
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255

Query: 235 GLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
           G C  G +     LF  +   G   C +    YN LI G CK G+L+ A E+F  +  R 
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAI---TYNTLIRGFCKLGQLKEASEIFEFMIERG 312

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           +  +V TY  +I GLC  G+  +A  L   M E    PN + +  +I+   +    +  +
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372

Query: 352 ELLHKMKEKKVMPD 365
           E++  MK+++  PD
Sbjct: 373 EIVELMKKRRTRPD 386


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  213 bits (543), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 192/365 (52%), Gaps = 2/365 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P++VTY  I+DGL K G  D     + +M      P ++TY  L+ GLC A+    A  +
Sbjct: 104 PDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDV 163

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+ +G +P ++ ++ ++D L K G++DEA +L+DLM+ R   P A  Y++++ G C 
Sbjct: 164 FEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCK 223

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+I  A +    M     +    +Y+ ++ GY    +VEEA ++  EM  +   P  ++
Sbjct: 224 CGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTIS 283

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y      L+ I + E A K+FE M       D  TY   ID  CK G +  A  + R + 
Sbjct: 284 YTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMD 343

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + +   Y  ++DG  KS RLE ALEL++ + +  ++   VTYN +I+ LC   +MD
Sbjct: 344 KAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMD 403

Query: 314 KAHDLFLDME--ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +A +L  +M+  +  + P+++ +  +IHG  ++    +  +LL +M +  V+PD    + 
Sbjct: 404 EALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTS 463

Query: 372 VVDLL 376
           ++  L
Sbjct: 464 LIQTL 468



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 181/369 (49%), Gaps = 37/369 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P  +TY  ++DGLCK   V++A  +F +M  +   PD++ Y+SLI GL  A   +EA+
Sbjct: 137 CEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEAR 196

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR------------------------ 107
           +L   M+ +G  P+ V +  I+  LCK G++ EA +                        
Sbjct: 197 KLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGY 256

Query: 108 -----------LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
                      +++ M  RD  P+  +Y+  ++     G+   AE++F +M   GCK D 
Sbjct: 257 IGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDM 316

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            +Y I+I+ +CK   +  A  + R M    +KP    Y  +  G  +  ++E AL+L++ 
Sbjct: 317 HTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQR 376

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD--IQAYNCLIDGLCKS 274
           + +D +   T TYNT I+ LCK   + EA+EL R +   K EL+  I  Y+ +I GL K 
Sbjct: 377 ILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKV 436

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G  E A +L   +    ++ D  TY  +I  L   G++ +A +L  +M +  + P+   +
Sbjct: 437 GMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTY 496

Query: 335 VTLIHGFVR 343
            TL+    R
Sbjct: 497 GTLVQILCR 505



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 179/373 (47%), Gaps = 7/373 (1%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           + +PN  ++N ++ G       +   AL  +MK   I  +  T+  ++  LC   D ++A
Sbjct: 24  ISEPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKA 83

Query: 71  KRLFFEMMDQGVQ-------PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
              F    ++  +       P  VT+  I+D L K G  D      + MV     P   T
Sbjct: 84  VSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLT 143

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           Y+ L+DG C   K+ RA ++F  M   G K D ++Y+ LI+G  K   V+EA  L   M+
Sbjct: 144 YTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMI 203

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
           ++G  PT V Y ++  GL +  +++ A+K  +EM+R  +     TY+  + G    G + 
Sbjct: 204 ARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVE 263

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           EA  +   +    C  D  +Y   I+ L   GR E A ++F ++  +    D+ TY I+I
Sbjct: 264 EAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIII 323

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
              C +G M  A  +   M++ AV PN  I+  ++ GFV+ ++  + +EL  ++ +  ++
Sbjct: 324 DNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGIL 383

Query: 364 PDASIVSMVVDLL 376
           P     + V++ L
Sbjct: 384 PSTVTYNTVINAL 396



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 171/362 (47%), Gaps = 44/362 (12%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ + Y+++IDGL K G VD+A+ L   M      P  V Y S++ GLC      EA +
Sbjct: 173 KPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVK 232

Query: 73  -----------------------------------LFFEMMDQGVQPSVVTFNVIMDELC 97
                                              +  EM D+   P  +++ + ++ L 
Sbjct: 233 TIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALY 292

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
             G+ +EA ++ + MV++  +P+  TY  ++D FC  G +  A  +   M+    K +  
Sbjct: 293 SIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRY 352

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            Y ++++G+ K+  +EEAL LY+ ++  GI P+ VTYNT+   L ++ +++ AL+L  EM
Sbjct: 353 IYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREM 412

Query: 218 QR--DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLC 272
           QR  +++     TY+  I GL K G    A +L   +   G++    D   Y  LI  L 
Sbjct: 413 QRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIP---DCFTYTSLIQTLA 469

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
            +G++  A+EL   + +  +  D  TY  ++  LC    +D A DL  +M  N   PN  
Sbjct: 470 GAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNGHTPNEF 528

Query: 333 IF 334
            F
Sbjct: 529 TF 530



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 101/187 (54%), Gaps = 3/187 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN   Y  I+DG  K   +++A  L+ ++  + I P  VTYN++I+ LC     +EA  
Sbjct: 348 KPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALE 407

Query: 73  LFFEMM--DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           L  EM    + ++PS+VT+++I+  L K G  + A  LL  M+   V P+ FTY++L+  
Sbjct: 408 LLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQT 467

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               GK++RA EL   M   G   DD +Y  L+   C++ +V+ A  L +EM+  G  P 
Sbjct: 468 LAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPN 526

Query: 191 VVTYNTL 197
             T+  +
Sbjct: 527 EFTFKAV 533


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  213 bits (543), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 195/359 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y T+IDG CK G ++KAK LF +M    +  +  TY  LIHGL       +   +
Sbjct: 196 PNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEM 255

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +M + GV P++ T+N +M++ CK+G+  +A +L D M +R V  N  TY+TL+ G C 
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCR 315

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K N A ++   M+S G   + ++YN LI+G+C   ++ +ALSL R++ S+G+ P++VT
Sbjct: 316 EMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +      A K+ +EM+   +     TY   ID   +   + +A++L   + 
Sbjct: 376 YNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPME 435

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            L    D+  Y+ LI G C  G++  A  LF+ +  + L  + V YN M+ G C +G   
Sbjct: 436 ELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSY 495

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +A  LF +MEE  + PNV  +  +I    +  K  +   L+ KM +  + P  SI++++
Sbjct: 496 RALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLI 554



 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 189/359 (52%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++  +I G C+ G ++K+  L ++++    +P+VV Y +LI G C   +  +AK LFFEM
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEM 224

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
              G+  +  T+ V++  L KNG   +   + + M +  V PN +TY+ +M+  C  G+ 
Sbjct: 225 GKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRT 284

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A +LF  M   G   + V+YN LI G C+  +  EA  +  +M S GI P ++TYNTL
Sbjct: 285 KDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTL 344

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G   + ++  AL L  +++   ++    TYN  + G CK G    A ++ + +     
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGI 404

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           +     Y  LID   +   +E A++L   +    L  DV TY+++IHG C  GQM++A  
Sbjct: 405 KPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASR 464

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           LF  M    + PN +I+ T++ G+ +     + + L  +M+EK++ P+ +    ++++L
Sbjct: 465 LFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVL 523



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 183/355 (51%), Gaps = 1/355 (0%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           Y  +I+   +   +D + + F +M  +   P    +N+L+  +  ++ +N+  R F E  
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            + V   V +F +++   C+ G+++++  LL  + +    PN   Y+TL+DG C  G+I 
Sbjct: 157 IK-VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIE 215

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
           +A++LF  M   G   ++ +Y +LI+G  KN   ++   +Y +M   G+ P + TYN + 
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
               +  + + A KLF+EM+   V+ +  TYNT I GLC+     EA ++   +      
Sbjct: 276 NQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGIN 335

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            ++  YN LIDG C  G+L  AL L R L  R L   +VTYNI++ G C  G    A  +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
             +MEE  + P+ I +  LI  F R++   K I+L   M+E  + PD    S+++
Sbjct: 396 VKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLI 450



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 76/150 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ +TY  +ID   +   ++KA  L   M+   + PDV TY+ LIHG C     NEA R
Sbjct: 405 KPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASR 464

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M+ + ++P+ V +N ++   CK G    A RL   M ++++ PN  +Y  +++  C
Sbjct: 465 LFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLC 524

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNIL 162
              K   AE L   M   G    D   N++
Sbjct: 525 KERKSKEAEGLVEKMIDTGIDPSDSILNLI 554


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 124/336 (36%), Positives = 185/336 (55%), Gaps = 9/336 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V Y ++I G CKEG +  A  L+ +M G+ I+P+  T+ +LI GLCHAN   EA +
Sbjct: 457 KPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANK 516

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM++  V P+ VT+NV+++  CK G    A  LLD MV++ + P+ +TY  L+ G C
Sbjct: 517 LFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLC 576

Query: 133 LTGKINRAEELFGSM--------ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
            TG+++ A E    +        E  GC  + V+Y  LING CK   +++A  L REM++
Sbjct: 577 STGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLA 636

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
               P   TY      L     +E A++L  ++  +   A+T TYN  I G CK G I E
Sbjct: 637 SNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRIQE 695

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A E+   +       D  +Y+ +I   C+ G L+ A++L+ S+  R +  D V YN +I+
Sbjct: 696 AAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIY 755

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           G C  G++ KA +L  DM    V PN   + +LIHG
Sbjct: 756 GCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791



 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 194/408 (47%), Gaps = 43/408 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +  TYN  I GLCK   V +A  +   +  + +  DV TY +L+ GLC   ++   +
Sbjct: 246 CDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGE 305

Query: 72  RLFFEMMDQG-----------------------------------VQPSVVTFNVIMDEL 96
            +  EM++ G                                   V PS+  +N +++ +
Sbjct: 306 EMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSM 365

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           CK+GK+DEA  L + M  + + PN  TYS L+D FC  GK++ A    G M  +G K   
Sbjct: 366 CKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATV 425

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
             Y+ LI+G+CK  ++  A SL+ EM++ G+KP VV Y +L  G  +  ++ +A +L+ E
Sbjct: 426 YPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHE 485

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M    ++ +T T+   I GLC    + EA +LF  +       +   YN LI+G CK G 
Sbjct: 486 MTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGN 545

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM--------EENAVA 328
              A EL   +  + LV D  TY  +I GLC+ G++ +A +   D+        E     
Sbjct: 546 TVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCL 605

Query: 329 PNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           PNV+ +  LI+G  +I    K   L  +M     +P+ +  +  +D L
Sbjct: 606 PNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYL 653



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 188/377 (49%), Gaps = 15/377 (3%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+G+  K     Y+++I G CK G +  AK+LF +M    + P+VV Y SLI G C   +
Sbjct: 418 EVGI--KATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGE 475

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            + A RL+ EM  +G+ P+  TF  ++  LC   +M EA++L   MV+ +V PN  TY+ 
Sbjct: 476 LHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNV 535

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK- 185
           L++G C  G   RA EL   M   G   D  +Y  LI+G C    V EA     ++  + 
Sbjct: 536 LIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQ 595

Query: 186 -------GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
                  G  P VVTY  L  GL +I  ++ A  L  EM   +   + +TY  F+D L  
Sbjct: 596 QKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTS 655

Query: 239 NGYIVEAVELFRTL--GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
            G I +A++L   L  G L    +   YN LI G CK GR++ A E+  ++    +  D 
Sbjct: 656 EGNIEKAIQLHDVLLEGFLA---NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDC 712

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           ++Y+ +I+  C  G + +A  L+  M    V P+ + +  LI+G     + +K  EL   
Sbjct: 713 ISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDD 772

Query: 357 MKEKKVMPDASIVSMVV 373
           M  + V P+ +  + ++
Sbjct: 773 MMRRGVKPNRATYNSLI 789



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 172/361 (47%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   T + +++GL +      A  LF ++    + PDV  Y +++  LC   D+  A+ +
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   G   SV T+NV +  LCKN ++ EA  + +L+  + +R +  TY TL+ G C 
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +    EE+   M   G    + + + L++G  K   +  A  L  ++   G+ P++  
Sbjct: 298 VEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFV 357

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L   + +  +++ A  LF  M    +  +  TY+  ID  CK G +  A+     + 
Sbjct: 358 YNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMT 417

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  +  +  Y+ LI G CK G+L  A  LF  +    L  +VV Y  +I G C +G++ 
Sbjct: 418 EVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELH 477

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L+ +M    ++PN   F  LI G    N+ ++  +L  +M E  V+P+    ++++
Sbjct: 478 NAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLI 537

Query: 374 D 374
           +
Sbjct: 538 E 538



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 156/335 (46%), Gaps = 35/335 (10%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           MMD G+ P + T + +++ L +  +   A  L D +V   +RP+ + Y+ ++   C    
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
             RA E+ G MES GC     +YN+ I G CKN+ V EA+ +   +  KG++  V TY T
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 197 LFLGLFEIHQVEHALKLFEEM-----------------------------------QRDD 221
           L LGL ++ + E   ++  EM                                   ++  
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           VA     YN  I+ +CK+G + EA  LF  +G      +   Y+ LID  CK G+L++AL
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
                +    + A V  Y+ +I G C  G++  A  LF +M  N + PNV+I+ +LI G+
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +  +      L H+M  K + P+    + ++  L
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGL 505



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 133/251 (52%), Gaps = 11/251 (4%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN--------PDVVTYNSLI 58
           E G+V  P+T TY  +I GLC  G V +A+     ++GE           P+VVTY +LI
Sbjct: 558 EKGLV--PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALI 615

Query: 59  HGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR 118
           +GLC     ++A+ L  EM+     P+  T+   +D L   G +++A +L D++++    
Sbjct: 616 NGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFL 674

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
            N  TY+ L+ GFC  G+I  A E+  +M   G   D +SY+ +I  YC+  +++EA+ L
Sbjct: 675 ANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKL 734

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
           +  M+++G+ P  V YN L  G     ++  A +L ++M R  V  + +TYN+ I G C 
Sbjct: 735 WESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCL 794

Query: 239 NGYIVEAVELF 249
              +    + F
Sbjct: 795 MSSVSSTADYF 805



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 105/218 (48%)

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           + +++LI  Y +N+   + L + R M+  GI P + T + +  GL  I Q   AL LF+E
Sbjct: 146 LGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDE 205

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           +    +  D   Y   +  LC+    + A E+   +    C+L +  YN  I GLCK+ R
Sbjct: 206 IVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQR 265

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +  A+E+   L  + L ADV TY  ++ GLC   + +   ++  +M E    P+      
Sbjct: 266 VWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSN 325

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           L+ G  +        +L++K+K+  V P   + + +++
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALIN 363


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 196/396 (49%), Gaps = 35/396 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V YNT+IDG CK G +  A  +   M  + INP+ VT NS+I G C      +A+ +
Sbjct: 349 PNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECI 408

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+ +G   +   F  I+  LC N + + A R L  M+ R++RPN    +TL+ G C 
Sbjct: 409 LEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCK 468

Query: 134 TGKINRAEELFGSMESMG---------------CKH--------------------DDVS 158
            GK + A EL+  +   G               CK                     D ++
Sbjct: 469 EGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKIT 528

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN LI+G CK  +VEE   L  EMV +GI+P   TYN L  G+  I +++ A+ L+ E +
Sbjct: 529 YNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECK 588

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
             D+  +  TY   IDG CK   I E  +LF  L     EL+   YN LI   C++G   
Sbjct: 589 SRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTV 648

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +L   +  + +     TY+ +IHG+CN G+M+ A  L  +M +  + PNV+ +  LI
Sbjct: 649 EAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALI 708

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            G+ ++ +  KV+ +L +M    + P+    ++++D
Sbjct: 709 GGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMID 744



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 112/336 (33%), Positives = 184/336 (54%), Gaps = 3/336 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N VT N +I GLCK G + +A  L  +M       D +TYN+LI G C      E  +L 
Sbjct: 490 NLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLR 549

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ QG++P   T+N+++  +C+ GK+DEA  L +    RD+ PN +TY  ++DG+C  
Sbjct: 550 GEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKA 609

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            KI   E+LF  + +   + + V YN LI  YC+N    EA  L+ +M SKGI PT  TY
Sbjct: 610 DKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATY 669

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           ++L  G+  I ++E A  L +EM+++ +  +   Y   I G CK G + + V + + +  
Sbjct: 670 SSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSS 729

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                +   Y  +IDG  KSG ++ A +L   +  + +V D VTYN++ +G C +G++++
Sbjct: 730 YDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEE 789

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
              +   M +  +  + I + TL+HG+    +PS +
Sbjct: 790 GFKICDYMSQEGLPLDEITYTTLVHGW---QQPSAL 822



 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 199/391 (50%), Gaps = 41/391 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVT------------------ 53
           PN+VT N+II G CK G +++A+ +  +M  +G +INP   T                  
Sbjct: 384 PNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRF 443

Query: 54  ---------------YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                            +L+ GLC     ++A  L+F ++++G   ++VT N ++  LCK
Sbjct: 444 LREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCK 503

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
            G M EA RLL  M++R    +  TY+TL+ G C  GK+    +L G M   G + D  +
Sbjct: 504 TGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFT 563

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN+LI+G C+  +++EA++L+ E  S+ + P V TY  +  G  +  ++E   KLF E+ 
Sbjct: 564 YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELL 623

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVEL---FRTLGILKCELDIQAYNCLIDGLCKSG 275
             ++  ++  YNT I   C+NG  VEA +L    R+ GI         Y+ LI G+C  G
Sbjct: 624 TQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPP---TTATYSSLIHGMCNIG 680

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           R+E A  L   + +  L+ +VV Y  +I G C  GQMDK  ++  +M    + PN I + 
Sbjct: 681 RMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYT 740

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            +I G+ +        +LLH+M  K ++PD 
Sbjct: 741 VMIDGYSKSGDMKTAAKLLHEMVGKGIVPDT 771



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 184/333 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTYN +I GLCK G +D+A     +M  + +N  ++TY+ LI+GL     +NEA  +
Sbjct: 279 PNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSV 338

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             E +++G  P+ V +N ++D  CK G + +A R+   MV + + PN+ T ++++ GFC 
Sbjct: 339 LKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCK 398

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++ +AE +   M S G   +  ++  +I+  C N   E AL   REM+ + ++P    
Sbjct: 399 IGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGL 458

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
             TL  GL +  +   A++L+  +      A+  T N  I GLCK G + EAV L + + 
Sbjct: 459 LTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKML 518

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                LD   YN LI G CK G++E   +L   + ++ +  D  TYN++IHG+C  G++D
Sbjct: 519 ERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLD 578

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +A +L+ + +   + PNV  +  +I G+ + +K
Sbjct: 579 EAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 611



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 195/396 (49%), Gaps = 36/396 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   T   ++  L K   ++K+  +F  M+ + ++PDV  +++ I+  C      +A +L
Sbjct: 210 PTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQL 268

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           FF+M   GV P+VVT+N ++  LCK+G +DEA R  + MV+  V     TYS L++G   
Sbjct: 269 FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMK 328

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K N A  +       G   ++V YN LI+GYCK   + +AL +  +MVSKGI P  VT
Sbjct: 329 LEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVT 388

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI-------------------- 233
            N++  G  +I Q+E A  + EEM     + +   + T I                    
Sbjct: 389 LNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREML 448

Query: 234 ---------------DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                           GLCK G   +AVEL+  L       ++   N LI GLCK+G ++
Sbjct: 449 LRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQ 508

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A+ L + +  R  V D +TYN +I G C +G++++   L  +M +  + P+   +  LI
Sbjct: 509 EAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLI 568

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           HG  RI K  + + L ++ K + ++P+     +++D
Sbjct: 569 HGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMID 604



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 140/265 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+T TYN +I G+C+ G +D+A  L+ + K  ++ P+V TY  +I G C A+   E ++
Sbjct: 558 EPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEK 617

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF E++ Q ++ + V +N ++   C+NG   EA +L D M  + + P   TYS+L+ G C
Sbjct: 618 LFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMC 677

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A+ L   M   G   + V Y  LI GYCK  ++++ +++ +EM S  I P  +
Sbjct: 678 NIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKI 737

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  +  G  +   ++ A KL  EM    +  DT TYN   +G CK G I E  ++   +
Sbjct: 738 TYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYM 797

Query: 253 GILKCELDIQAYNCLIDGLCKSGRL 277
                 LD   Y  L+ G  +   L
Sbjct: 798 SQEGLPLDEITYTTLVHGWQQPSAL 822



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 153/313 (48%), Gaps = 4/313 (1%)

Query: 51  VVTYNSLIHGLC---HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR 107
           V   + LIH  C       +  A  +F  + ++GV P+V T   ++  L K  +++++  
Sbjct: 174 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW 233

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
           + + M Q  V P+ + +ST ++ FC  GK+  A +LF  ME +G   + V+YN LI+G C
Sbjct: 234 VFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLC 292

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           K+  ++EA     +MV  G+  T++TY+ L  GL ++ +   A  + +E        +  
Sbjct: 293 KHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEV 352

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
            YNT IDG CK G + +A+ +   +       +    N +I G CK G++E A  +   +
Sbjct: 353 VYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM 412

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
             R    +   +  +IH LC + + + A     +M    + PN  +  TL+ G  +  K 
Sbjct: 413 LSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKH 472

Query: 348 SKVIELLHKMKEK 360
           S  +EL  ++ EK
Sbjct: 473 SDAVELWFRLLEK 485



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 39/221 (17%)

Query: 157 VSYNILINGYC---KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            + ++LI+ YC   +N     A+ ++R + +KG+ PTV T   L   L + +++E +  +
Sbjct: 175 AAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWV 234

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
           FE M R  V+ D                    V LF T                I+  CK
Sbjct: 235 FETM-RQGVSPD--------------------VYLFSTA---------------INAFCK 258

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
            G++E A++LF  + +  +  +VVTYN +IHGLC  G +D+A      M ++ V   +I 
Sbjct: 259 GGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLIT 318

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +  LI+G +++ K ++   +L +  EK   P+  + + ++D
Sbjct: 319 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLID 359


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 197/366 (53%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
            C+P+ VTY ++I+GL + G VD+A  L+ QM   N  P+ V Y SLI          + 
Sbjct: 474 TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDG 533

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            +++ EM+  G  P ++  N  MD + K G++++   L   +      P+A +Y+ L+ G
Sbjct: 534 HKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHG 593

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               G  + A ELF +M+  GC  D  +YN +I+G+CK+ +V +A  L  EM +KG +PT
Sbjct: 594 LVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPT 653

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY ++  GL +I +++ A  LFEE +   +  +   Y++ IDG  K G I EA  +  
Sbjct: 654 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIME 713

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            L       ++  +NCL+D L K+  +  AL  F+S+       + +TY+I+IHGLC   
Sbjct: 714 ELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIR 773

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           + +KA   + +M++    PNV  + T+I G  +     +   L  K KEK  + D++I +
Sbjct: 774 KFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYN 833

Query: 371 MVVDLL 376
            +++ L
Sbjct: 834 AIIEGL 839



 Score =  203 bits (517), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 199/365 (54%), Gaps = 1/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V+YN I+  L ++G VD+A   F +MK + I P++ TYN +I  LC A     A 
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETAL 429

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   M D G+ P+V+T N+++D LCK  ++D+A  + + +  +  RP+A TY +L++G 
Sbjct: 430 VVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGL 489

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+++ A +L+  M       + V Y  LI  + K    E+   +Y EM+  G  P +
Sbjct: 490 GRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDL 549

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +  NT    +F+  ++E    LF+E++      D  +Y   I GL K G+  EA ELF T
Sbjct: 550 LLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYT 609

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C LD +AYN +IDG CKSG++  A +L   +  +     VVTY  +I GL    +
Sbjct: 610 MKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDR 669

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A+ LF + +   +  NV+I+ +LI GF ++ +  +   ++ ++ +K + P+    + 
Sbjct: 670 LDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 729

Query: 372 VVDLL 376
           ++D L
Sbjct: 730 LLDAL 734



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 186/360 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN +ID LCK G ++ A  +   MK   + P+V+T N ++  LC A   ++A  +
Sbjct: 407 PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSI 466

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  +  +  +P  VT+  +++ L ++G++DEA +L + M+  +  PNA  Y++L+  F  
Sbjct: 467 FEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFK 526

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+     +++  M  +GC  D +  N  ++   K  E+E+  +L++E+ + G  P   +
Sbjct: 527 CGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARS 586

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +      A +LF  M+      DT  YNT IDG CK+G + +A +L   + 
Sbjct: 587 YTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMK 646

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E  +  Y  +IDGL K  RL+ A  LF     + +  +VV Y+ +I G    G++D
Sbjct: 647 TKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRID 706

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A+ +  ++ +  + PNV  +  L+   V+  + S+ +     MK+ K  P+    S+++
Sbjct: 707 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILI 766



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 191/400 (47%), Gaps = 38/400 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V YN  ID   K G VD A   F +MK   +  D VTY S+I  LC A+  NEA  
Sbjct: 267 EPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVE 326

Query: 73  LFFEMMDQGVQ------------------------------------PSVVTFNVIMDEL 96
           L FE MDQ  Q                                    PSVV++N I+  L
Sbjct: 327 L-FEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCL 385

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
            + G++DEA +  + M ++D  PN  TY+ ++D  C  GK+  A  +  +M+  G   + 
Sbjct: 386 GRKGQVDEALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNV 444

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           ++ NI+++  CK + +++A S++  +  K  +P  VTY +L  GL    +V+ A KL+E+
Sbjct: 445 ITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQ 504

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M   +   +   Y + I    K G   +  +++  +  L C  D+   N  +D + K+G 
Sbjct: 505 MLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGE 564

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +E    LF+ +     + D  +Y I+IHGL   G   +A++LF  M+E     +   + T
Sbjct: 565 IEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNT 624

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +I GF +  K +K  +LL +MK K   P       V+D L
Sbjct: 625 VIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGL 664



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 151/269 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +T  YNT+IDG CK G V+KA  L  +MK +   P VVTY S+I GL   +  +EA 
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAY 674

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF E   +G++ +VV ++ ++D   K G++DEA  +++ ++Q+ + PN +T++ L+D  
Sbjct: 675 MLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 734

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +I+ A   F SM+ + C  + ++Y+ILI+G CK ++  +A   ++EM  +G KP V
Sbjct: 735 VKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNV 794

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY T+  GL +   +  A  LFE+ +     AD++ YN  I+GL       +A  LF  
Sbjct: 795 FTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEE 854

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIA 280
             +  C +  +    L+D L K+  +E A
Sbjct: 855 ARLKGCSIYTKTCVVLLDSLHKAECIEQA 883



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 173/362 (47%), Gaps = 1/362 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P    Y  +I  L      D    LF QM+      +V  + +LI         + A  
Sbjct: 197 RPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALS 256

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM    ++P VV +NV +D   K GK+D A +    M    +  +  TY++++   C
Sbjct: 257 LLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLC 316

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++N A ELF  M+         +YN +I GY    + E+A SL      KG  P+VV
Sbjct: 317 KADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVV 376

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YN +   L    QV+ ALK FEEM++D +  + STYN  ID LCK G +  A+ +   +
Sbjct: 377 SYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAM 435

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++   N ++D LCK+ RL+ A  +F  L  +    D VTY  +I GL   G++
Sbjct: 436 KDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRV 495

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A+ L+  M +    PN +++ +LI  F +  +     ++ ++M      PD  +++  
Sbjct: 496 DEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTY 555

Query: 373 VD 374
           +D
Sbjct: 556 MD 557



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 153/324 (47%), Gaps = 1/324 (0%)

Query: 53  TYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM 112
            YNSL+  +     +N  +++  EM   G  PS  T   I+    K+ K+ EA   +  M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 113 VQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
            +   RP    Y+ L+     +   +    LF  M+ +G   +   +  LI  + +   V
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           + ALSL  EM S  ++P VV YN       +  +V+ A K F EM+ + +  D  TY + 
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           I  LCK   + EAVELF  +   K      AYN +I G   +G+ E A  L     R+  
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
           +  VV+YN ++  L   GQ+D+A   F +M+++A+ PN+  +  +I    +  K    + 
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALV 430

Query: 353 LLHKMKEKKVMPDASIVSMVVDLL 376
           +   MK+  + P+   V+++VD L
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRL 454



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 52/94 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN  TY T+I GL K G + +A  LF + K +    D   YN++I GL +AN  ++A R
Sbjct: 791 KPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYR 850

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           LF E   +G      T  V++D L K   +++A+
Sbjct: 851 LFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAA 884


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 125/364 (34%), Positives = 194/364 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N VTYN  I+G  K   +     +   M+ E +  +VVTY  LIHG  +     EA+R
Sbjct: 257 KANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQR 316

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM ++G++  V  +  I+   C++G +  A  L D M  + + P+A TY  L+ G C
Sbjct: 317 LFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVC 376

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A+ L   M+  G   + V +N LI+GYC++  V+EAL L   M  KG++  V 
Sbjct: 377 KAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVF 436

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN++  GL ++++ + A  L   M    V+ +T ++ T ID  CK G  VEA  +FR +
Sbjct: 437 AYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREM 496

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +I  YN LIDG  K G ++ A +L   L  R L+ DV T   +IHG C DG++
Sbjct: 497 EEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKV 556

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  LF +M +  + PNV+ +  +I G  +  +  +  +L  +MKE  + PD ++ S +
Sbjct: 557 DMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSL 616

Query: 373 VDLL 376
           V  L
Sbjct: 617 VGSL 620



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 172/341 (50%)

Query: 25  GLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQP 84
            L + G VD     F +M   ++   V +   ++ GLC   D    ++L  E+  +GV+ 
Sbjct: 199 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 258

Query: 85  SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELF 144
           +VVT+N  ++   K   +   + +L LM +  V  N  TY+ L+ GF   GKI  A+ LF
Sbjct: 259 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 318

Query: 145 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 204
             M   G + D   Y  +I+  C++  V+ AL L+ EM  KG+ P+  TY  L  G+ + 
Sbjct: 319 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 378

Query: 205 HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
            Q+E A  L  EMQ   +  +   +NT IDG C++G + EA+ L   +     E D+ AY
Sbjct: 379 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAY 438

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
           N +  GLCK  R + A  L  S+  R +  + +++  +I   C +G   +A  +F +MEE
Sbjct: 439 NSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEE 498

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
               PN+I +  LI G+ +     +  +L  +++ + ++PD
Sbjct: 499 KGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPD 539



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 155/303 (51%)

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R F  M++  V+ +V +  +++D LCK G ++   +L+D +  + V+ N  TY+  ++G+
Sbjct: 211 RFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGY 270

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
                +    E+   ME  G   + V+Y +LI+G+    ++EEA  L+ EM  KGI+  V
Sbjct: 271 FKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADV 330

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y ++         V+ AL LF+EM    +     TY   I G+CK G +  A  L   
Sbjct: 331 YVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNE 390

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     +L+   +N LIDG C+SG ++ AL L   + ++ L +DV  YN +  GLC   +
Sbjct: 391 MQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNR 450

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D+A  L   M E  V+PN + F TLI  + +     +   +  +M+EK  +P+    ++
Sbjct: 451 KDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNV 510

Query: 372 VVD 374
           ++D
Sbjct: 511 LID 513



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 147/309 (47%)

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           + EA   F  M  +G      +  V +  L + G++D   R    MV  DV    ++ + 
Sbjct: 171 FGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 230

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++DG C  G +    +L   + + G K + V+YN  I GY K  ++     +   M  +G
Sbjct: 231 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 290

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +   VVTY  L  G   I ++E A +LFEEM+   + AD   Y + I   C++G +  A+
Sbjct: 291 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 350

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            LF  +           Y  LI G+CK+G++E A  L   +  + +  + V +N +I G 
Sbjct: 351 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 410

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C  G +D+A  L + ME+  +  +V  + ++  G  ++N+  +   LL  M E+ V P+ 
Sbjct: 411 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 470

Query: 367 SIVSMVVDL 375
              + ++D+
Sbjct: 471 MSFTTLIDI 479



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 13/274 (4%)

Query: 94  DELCKNGKMDEASRLLDLMVQRD-VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           D+L K+ K  E   L +     D +R      ++L+D  C   K NRA            
Sbjct: 104 DKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACNESKCNRA------------ 151

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
           K  +  +++L   Y  NK   EAL  +  M  KG      +     L L    QV+  L+
Sbjct: 152 KFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLR 211

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
            F  M   DV     +    +DGLCK G +    +L   +     + ++  YN  I+G  
Sbjct: 212 FFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYF 271

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           K   L    E+   + +  +  +VVTY ++IHG  N G++++A  LF +M E  +  +V 
Sbjct: 272 KRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVY 331

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           ++ ++I    R     + + L  +M +K ++P A
Sbjct: 332 VYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSA 365


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 197/366 (53%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
            C+P+ VTY ++I+GL + G VD+A  L+ QM   N  P+ V Y SLI          + 
Sbjct: 474 TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDG 533

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            +++ EM+  G  P ++  N  MD + K G++++   L   +      P+A +Y+ L+ G
Sbjct: 534 HKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHG 593

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               G  + A ELF +M+  GC  D  +YN +I+G+CK+ +V +A  L  EM +KG +PT
Sbjct: 594 LVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPT 653

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY ++  GL +I +++ A  LFEE +   +  +   Y++ IDG  K G I EA  +  
Sbjct: 654 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIME 713

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            L       ++  +NCL+D L K+  +  AL  F+S+       + +TY+I+IHGLC   
Sbjct: 714 ELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIR 773

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           + +KA   + +M++    PNV  + T+I G  +     +   L  K KEK  + D++I +
Sbjct: 774 KFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYN 833

Query: 371 MVVDLL 376
            +++ L
Sbjct: 834 AIIEGL 839



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 199/365 (54%), Gaps = 1/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V+YN I+  L ++G VD+A   F +MK + I P++ TYN +I  LC A     A 
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETAL 429

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   M D G+ P+V+T N+++D LCK  ++D+A  + + +  +  RP+A TY +L++G 
Sbjct: 430 VVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGL 489

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+++ A +L+  M       + V Y  LI  + K    E+   +Y EM+  G  P +
Sbjct: 490 GRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDL 549

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +  NT    +F+  ++E    LF+E++      D  +Y   I GL K G+  EA ELF T
Sbjct: 550 LLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYT 609

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C LD +AYN +IDG CKSG++  A +L   +  +     VVTY  +I GL    +
Sbjct: 610 MKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDR 669

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A+ LF + +   +  NV+I+ +LI GF ++ +  +   ++ ++ +K + P+    + 
Sbjct: 670 LDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 729

Query: 372 VVDLL 376
           ++D L
Sbjct: 730 LLDAL 734



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 186/360 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN +ID LCK G ++ A  +   MK   + P+V+T N ++  LC A   ++A  +
Sbjct: 407 PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSI 466

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  +  +  +P  VT+  +++ L ++G++DEA +L + M+  +  PNA  Y++L+  F  
Sbjct: 467 FEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFK 526

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+     +++  M  +GC  D +  N  ++   K  E+E+  +L++E+ + G  P   +
Sbjct: 527 CGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARS 586

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +      A +LF  M+      DT  YNT IDG CK+G + +A +L   + 
Sbjct: 587 YTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMK 646

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E  +  Y  +IDGL K  RL+ A  LF     + +  +VV Y+ +I G    G++D
Sbjct: 647 TKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRID 706

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A+ +  ++ +  + PNV  +  L+   V+  + S+ +     MK+ K  P+    S+++
Sbjct: 707 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILI 766



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 191/400 (47%), Gaps = 38/400 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V YN  ID   K G VD A   F +MK   +  D VTY S+I  LC A+  NEA  
Sbjct: 267 EPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVE 326

Query: 73  LFFEMMDQGVQ------------------------------------PSVVTFNVIMDEL 96
           L FE MDQ  Q                                    PSVV++N I+  L
Sbjct: 327 L-FEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCL 385

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
            + G++DEA +  + M ++D  PN  TY+ ++D  C  GK+  A  +  +M+  G   + 
Sbjct: 386 GRKGQVDEALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNV 444

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           ++ NI+++  CK + +++A S++  +  K  +P  VTY +L  GL    +V+ A KL+E+
Sbjct: 445 ITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQ 504

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M   +   +   Y + I    K G   +  +++  +  L C  D+   N  +D + K+G 
Sbjct: 505 MLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGE 564

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +E    LF+ +     + D  +Y I+IHGL   G   +A++LF  M+E     +   + T
Sbjct: 565 IEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNT 624

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +I GF +  K +K  +LL +MK K   P       V+D L
Sbjct: 625 VIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGL 664



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 151/269 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +T  YNT+IDG CK G V+KA  L  +MK +   P VVTY S+I GL   +  +EA 
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAY 674

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF E   +G++ +VV ++ ++D   K G++DEA  +++ ++Q+ + PN +T++ L+D  
Sbjct: 675 MLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 734

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +I+ A   F SM+ + C  + ++Y+ILI+G CK ++  +A   ++EM  +G KP V
Sbjct: 735 VKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNV 794

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY T+  GL +   +  A  LFE+ +     AD++ YN  I+GL       +A  LF  
Sbjct: 795 FTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEE 854

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIA 280
             +  C +  +    L+D L K+  +E A
Sbjct: 855 ARLKGCSIYTKTCVVLLDSLHKAECIEQA 883



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 173/362 (47%), Gaps = 1/362 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P    Y  +I  L      D    LF QM+      +V  + +LI         + A  
Sbjct: 197 RPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALS 256

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM    ++P VV +NV +D   K GK+D A +    M    +  +  TY++++   C
Sbjct: 257 LLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLC 316

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++N A ELF  M+         +YN +I GY    + E+A SL      KG  P+VV
Sbjct: 317 KADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVV 376

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YN +   L    QV+ ALK FEEM++D +  + STYN  ID LCK G +  A+ +   +
Sbjct: 377 SYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAM 435

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++   N ++D LCK+ RL+ A  +F  L  +    D VTY  +I GL   G++
Sbjct: 436 KDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRV 495

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A+ L+  M +    PN +++ +LI  F +  +     ++ ++M      PD  +++  
Sbjct: 496 DEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTY 555

Query: 373 VD 374
           +D
Sbjct: 556 MD 557



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 153/324 (47%), Gaps = 1/324 (0%)

Query: 53  TYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM 112
            YNSL+  +     +N  +++  EM   G  PS  T   I+    K+ K+ EA   +  M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 113 VQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
            +   RP    Y+ L+     +   +    LF  M+ +G   +   +  LI  + +   V
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           + ALSL  EM S  ++P VV YN       +  +V+ A K F EM+ + +  D  TY + 
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           I  LCK   + EAVELF  +   K      AYN +I G   +G+ E A  L     R+  
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
           +  VV+YN ++  L   GQ+D+A   F +M+++A+ PN+  +  +I    +  K    + 
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALV 430

Query: 353 LLHKMKEKKVMPDASIVSMVVDLL 376
           +   MK+  + P+   V+++VD L
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRL 454



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 52/94 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN  TY T+I GL K G + +A  LF + K +    D   YN++I GL +AN  ++A R
Sbjct: 791 KPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYR 850

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           LF E   +G      T  V++D L K   +++A+
Sbjct: 851 LFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAA 884


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 191/362 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  NTVTYN +I GLC+ G V++A      M+   + PD  TY +LI+GLC +   NEAK
Sbjct: 148 CGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAK 207

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM    ++P+VV +  ++D   + G  DEA +++  MV   V+PN  TY  L+ G 
Sbjct: 208 ALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGL 267

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++RA  L   M     + D ++YN++I G+ ++   ++A  L  EM + GI P V
Sbjct: 268 CKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNV 327

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY+ +  GL +  + E A  L EEM    +  +   Y   I G C+ G +  A E+F  
Sbjct: 328 YTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDK 387

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +    D+  YN LI GL K GR+E + + F  +  R L+ +  TY+ +IHG   +G 
Sbjct: 388 MTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGD 447

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           ++ A  L   M +  + PN +I++ L+  + + +   KV      M ++ VM D  I  +
Sbjct: 448 LESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGI 507

Query: 372 VV 373
           ++
Sbjct: 508 LI 509



 Score =  200 bits (509), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 194/369 (52%), Gaps = 3/369 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G    P+  TY+T+I+  CK    D AK + ++M+      + VTYN LI GLC +   
Sbjct: 109 VGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAV 168

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA     +M D G+ P   T+  +++ LCK+ + +EA  LLD M   +++PN   Y+ L
Sbjct: 169 EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL 228

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DGF   G  + A ++   M + G + + ++Y+ L+ G CK  +++ A  L ++MV    
Sbjct: 229 IDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 288

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P  +TYN +  G F  H  + A +L  EM+   ++ +  TY+  I GLC++G   +A +
Sbjct: 289 RPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 348

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +     + +   Y  LI G C+ G + +A E+F  + +  ++ D+  YN +I GL 
Sbjct: 349 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 408

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G+++++   F  M+E  + PN   +  LIHG+++        +L+ +M +  + P+  
Sbjct: 409 KVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDV 468

Query: 368 IVSMVVDLL 376
           I    +DLL
Sbjct: 469 I---YIDLL 474



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 194/396 (48%), Gaps = 35/396 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +TY+ ++ GLCK G +D+A  L  QM  ++  PD +TYN +I G    ++  +A R
Sbjct: 254 QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFR 313

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM + G+ P+V T+++++  LC++G+ ++AS LL+ M  + ++PNAF Y+ L+ G+C
Sbjct: 314 LLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 373

Query: 133 LTG--------------------------------KINRAEE---LFGSMESMGCKHDDV 157
             G                                K+ R EE    F  M+  G   ++ 
Sbjct: 374 REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEF 433

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y+ LI+GY KN ++E A  L + M+  G+KP  V Y  L    F+   +E     F+ M
Sbjct: 434 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 493

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
               V  D   Y   I  L  +G +  A  +   +       D+  Y+ LI GLCK+   
Sbjct: 494 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADR 553

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           E A  +   + ++ +  ++V YN +I GLC  G +  A ++F  +    + PN + + +L
Sbjct: 554 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 613

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           I G  ++   S    L ++M    + PDA + S++ 
Sbjct: 614 IDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 649



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 175/324 (54%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           M G  I+PDV TY++LI   C   +++ AK++  EM ++G   + VT+NV++  LC++G 
Sbjct: 108 MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 167

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           ++EA      M    + P+ FTY  L++G C + + N A+ L   M     K + V Y  
Sbjct: 168 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN 227

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LI+G+ +    +EA  + +EMV+ G++P  +TY+ L  GL ++ Q++ A  L ++M RD 
Sbjct: 228 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 287

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              DT TYN  I+G  ++    +A  L   +       ++  Y+ +I GLC+SG  E A 
Sbjct: 288 HRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 347

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           +L   +  + L  +   Y  +I G C +G +  A ++F  M +  V P++  + +LI G 
Sbjct: 348 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 407

Query: 342 VRINKPSKVIELLHKMKEKKVMPD 365
            ++ +  +  +   +M+E+ ++P+
Sbjct: 408 SKVGRVEESTKYFAQMQERGLLPN 431



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 164/346 (47%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           + ++D   K G V  A  + L M+   + P +   N+L+  L  A+      ++   M+ 
Sbjct: 51  DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVG 110

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
            G+ P V T++ +++  CK  + D A ++L  M +R    N  TY+ L+ G C +G +  
Sbjct: 111 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 170

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A      ME  G   D  +Y  LING CK++   EA +L  EM    +KP VV Y  L  
Sbjct: 171 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 230

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           G       + A K+ +EM    V  +  TY+  + GLCK G +  A  L + +       
Sbjct: 231 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 290

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           D   YN +I+G  +    + A  L   +    +  +V TY+IMIHGLC  G+ +KA DL 
Sbjct: 291 DTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 350

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +M    + PN  ++  LI G+ R    S   E+  KM +  V+PD
Sbjct: 351 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 396



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 155/307 (50%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            +A  +   M D+G+ PS+   N ++ +L +   M    ++ + MV   + P+ +TYSTL
Sbjct: 64  QDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTL 123

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++ +C   + + A+++   M   GC  + V+YN+LI G C++  VEEA    ++M   G+
Sbjct: 124 IEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 183

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P   TY  L  GL +  +   A  L +EM   ++  +   Y   IDG  + G   EA +
Sbjct: 184 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 243

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           + + +     + +   Y+ L+ GLCK G+++ A  L + + R     D +TYN++I G  
Sbjct: 244 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 303

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
                  A  L  +ME   ++PNV  +  +IHG  +  +P K  +LL +M  K + P+A 
Sbjct: 304 RHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 363

Query: 368 IVSMVVD 374
           + + ++ 
Sbjct: 364 VYAPLIS 370



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 173/369 (46%), Gaps = 25/369 (6%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V Y  +++   K   ++K  + F  M  + +  D   Y  LIH L  + +   A R
Sbjct: 464 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 523

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  E+   G  P V  ++ ++  LCK    ++A  +LD M ++ V PN   Y+ L+DG C
Sbjct: 524 VLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 583

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G I+ A  +F S+ + G   + V+Y  LI+G CK  ++  A  LY EM++ GI P   
Sbjct: 584 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 643

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ L  G      +E A+ L EEM      A  S++N  +DG CK G + E ++L   +
Sbjct: 644 VYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVI 702

Query: 253 ---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV----------LVADVV-- 297
              G++   L I+    +I GL ++G+L     +F  L ++           L  D++  
Sbjct: 703 MGRGLVPNALTIEN---IISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQ 759

Query: 298 ------TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
                   + MI   C +G +DKA  L   +   +       ++ ++    R  K S+ +
Sbjct: 760 GKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEAL 819

Query: 352 ELLHKMKEK 360
            LL +M ++
Sbjct: 820 NLLKEMDKR 828



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 20/153 (13%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE-------- 69
           ++N ++DG CK G + +   L   + G  + P+ +T  ++I GL  A   +E        
Sbjct: 678 SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVEL 737

Query: 70  -------AKR----LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR 118
                  A R    LF +M++QG  P  V  ++I D  CK G +D+A  L D++V +   
Sbjct: 738 QQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDH-CKEGNLDKALMLRDVIVAKSAP 796

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
               +Y  ++D  C  GK++ A  L   M+  G
Sbjct: 797 MGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 829


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 119/358 (33%), Positives = 201/358 (56%), Gaps = 14/358 (3%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           YN++++ LCK   V +A A+F  M  E +  PDVV+Y+ LI G C  ++   A++L+ +M
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +D    P+V T+N  ++ L + G++ +A  + + MV     P+  TYSTL+ GF L  K 
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKH 568

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           ++A ELF +M S GC+ + V+YN L++G CK  + +EA  L+R+MV +G  P  VTY TL
Sbjct: 569 DQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTL 628

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G   + ++E A+++F+EM       D   YN  + G  + G   EA +LF+ +   +C
Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQC 688

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPR-RVLVADVVTYNIMIHGLCNDGQMDKAH 316
           + D  ++N +IDGL K+ RL+ A+E+F  + +      D+VTYN +I GLC + ++ +A 
Sbjct: 689 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAM 748

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGF---------VRINKPSK---VIELLHKMKEKKV 362
            +F +++   ++P+   F  L+            +R   P     ++E +H    K V
Sbjct: 749 KVFKEIDRLKLSPDPHAFNVLLEAIKCGIVYQFEIRFKDPPAFNVLMEAMHAAGHKPV 806



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 193/361 (53%), Gaps = 3/361 (0%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           Y+ +I  L + G +DKA+   L++ G NI P   T +S+I  LC A   + A  L   M+
Sbjct: 342 YDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMI 401

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR--DVRPNAFTYSTLMDGFCLTGK 136
            +G  P + T +++++ELCK  K+ EA   L  M ++      + F+Y++L++  C   K
Sbjct: 402 KRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKK 461

Query: 137 INRAEELFGSMES-MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           +++A  +F +M S      D VSY+ILI+G+CK  E+  A  LY++M+     P V TYN
Sbjct: 462 VHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYN 521

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
               GL    ++  A  ++EEM     + D  TY+T I G        +A ELF T+   
Sbjct: 522 AFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISR 581

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
            C  +   YNCL+ GLCK  + + A ELFR +  R    D VTY  +++G CN G++++A
Sbjct: 582 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQA 641

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
            ++F +M      P+V+ +  L+ GF R  KP +  +L   M  ++  PD    ++++D 
Sbjct: 642 VEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDG 701

Query: 376 L 376
           L
Sbjct: 702 L 702



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/294 (36%), Positives = 162/294 (55%), Gaps = 1/294 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+Y+ +IDG CK   + +A+ L+ QM   N  P+V TYN+ ++GL       +A+ +
Sbjct: 480 PDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGV 539

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + EM+  G  P V+T++ ++       K D+A  L + M+ R  RPNA TY+ L+ G C 
Sbjct: 540 YEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCK 599

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K + A ELF  M   GC  D V+Y  L+ G+C   ++E+A+ ++ EMVSKG  P VV 
Sbjct: 600 ESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVA 659

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF-RTL 252
           YN L  G F   +   A +LF+ M       DT ++N  IDGL K   + +AVE+F R  
Sbjct: 660 YNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERME 719

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
               C  D+  YN LI GLC   RL  A+++F+ + R  L  D   +N+++  +
Sbjct: 720 QDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 99/265 (37%), Positives = 160/265 (60%), Gaps = 1/265 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           I + C PN  TYN  ++GL ++G +  A+ ++ +M     +PDV+TY++LIHG   A   
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKH 568

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  LF  M+ +G +P+ VT+N ++  LCK  K DEA  L   MV+R   P+  TY+TL
Sbjct: 569 DQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTL 628

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + GFC  GKI +A E+F  M S G   D V+YN L+ G+ +  +  EA  L++ MVS+  
Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQC 688

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAV 246
           KP  V++N +  GL +  +++ A+++FE M++D   + D  TYN+ I GLC    + EA+
Sbjct: 689 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAM 748

Query: 247 ELFRTLGILKCELDIQAYNCLIDGL 271
           ++F+ +  LK   D  A+N L++ +
Sbjct: 749 KVFKEIDRLKLSPDPHAFNVLLEAI 773



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 197/392 (50%), Gaps = 38/392 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINP-DVVTYNSLIHGLCHAND---- 66
           CKP+   Y+ ++   CK   +D+A  LFL+M  E+  P + V + + + GLC +      
Sbjct: 265 CKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQA 324

Query: 67  ------------------------------WNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
                                          ++A+    E+  + +QPS  T + ++ EL
Sbjct: 325 FEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQEL 384

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES--MGCKH 154
           CK G++D A  LL+ M++R   P+  T+S L++  C   KI  A+E    M+        
Sbjct: 385 CKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSS 444

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVS-KGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
              SYN L+N  CK K+V +A +++  MVS +   P VV+Y+ L  G  +I ++  A KL
Sbjct: 445 SCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKL 504

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
           +++M   +   + +TYN F++GL + G I +A  ++  +    C  D+  Y+ LI G   
Sbjct: 505 YKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSL 564

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           + + + A ELF ++  R    + VTYN ++HGLC + + D+AH+LF  M E    P+ + 
Sbjct: 565 ARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVT 624

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + TL++GF  + K  + +E+  +M  K   PD
Sbjct: 625 YTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPD 656



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 181/351 (51%), Gaps = 5/351 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P++ T +++I  LCK G VD A +L   M      PD+ T++ LI+ LC A+   EA+ 
Sbjct: 371 QPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQE 430

Query: 73  LFFEMMDQGVQPSVVT---FNVIMDELCKNGKMDEASRLLDLMV-QRDVRPNAFTYSTLM 128
            F + MD+ +     +   +N +++ LCK  K+ +A  +   MV +R   P+  +YS L+
Sbjct: 431 -FLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILI 489

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DGFC   ++ RAE+L+  M  + C  +  +YN  +NG  +   + +A  +Y EMV+ G  
Sbjct: 490 DGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCS 549

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P V+TY+TL  G     + + A +LFE M       +  TYN  + GLCK     EA EL
Sbjct: 550 PDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHEL 609

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           FR +    C+ D   Y  L+ G C  G++E A+E+F  +  +    DVV YN ++ G   
Sbjct: 610 FRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFR 669

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
            G+  +A  LF  M      P+ +    +I G  +  +    +E+  +M++
Sbjct: 670 AGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQ 720



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 177/366 (48%), Gaps = 5/366 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +  TYN ++D L +   + +A  +F +M  + + P+  TY  L+   C+  + +EA R
Sbjct: 126 KHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVR 185

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM+D+G +PS   +  + + L   GK  E SR+    +++ V         L+  F 
Sbjct: 186 FFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFV 245

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP-TV 191
           +  K   A +LF +M   GCK D   Y+ ++  +CK + ++EA  L+ EM  +   P   
Sbjct: 246 IQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNN 305

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V +     GL +  ++E A +    MQ + +++    Y+  I  L ++G I +A E    
Sbjct: 306 VAWTAFLSGLCKSGKIEQAFEACRTMQ-ESLSSSQPVYDMLIRLLIESGRIDKAEEACLE 364

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     +      + +I  LCK+GR++ AL L  ++ +R    D+ T++++I+ LC   +
Sbjct: 365 IAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADK 424

Query: 312 MDKAHDLFLDMEEN--AVAPNVIIFVTLIHGFVRINKPSKVIELLHKM-KEKKVMPDASI 368
           + +A +    M+    + + +   + +L++   +  K  +   +   M  E+  +PD   
Sbjct: 425 IQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVS 484

Query: 369 VSMVVD 374
            S+++D
Sbjct: 485 YSILID 490



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 152/329 (46%), Gaps = 4/329 (1%)

Query: 34  KAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIM 93
           +A   F  ++  N   DV TYN L+  L    D  +A ++F +M+ QGV P+  T+ V++
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171

Query: 94  DELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS-MESMGC 152
              C     DEA R    MV +  +P++  Y  + +    TGK      +FG  +E    
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
               +   +L+N   ++K + EA  L+R MV  G KP    Y+ + L   ++  ++ A K
Sbjct: 232 VEMMLKKALLVNFVIQDKAI-EASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFK 290

Query: 213 LFEEMQRDDVAA-DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           LF EM  +  A  +   +  F+ GLCK+G I +A E  RT+           Y+ LI  L
Sbjct: 291 LFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQ-ESLSSSQPVYDMLIRLL 349

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
            +SGR++ A E    +  R +     T + +I  LC  G++D A  L   M +    P++
Sbjct: 350 IESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDM 409

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEK 360
                LI+   + +K  +  E L  M  K
Sbjct: 410 ATHSMLINELCKADKIQEAQEFLQGMDRK 438


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/364 (34%), Positives = 194/364 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N VTYN  I+G  K   +     +   M+ E +  +VVTY  LIHG  +     EA+R
Sbjct: 261 KANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQR 320

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM ++G++  V  +  I+   C++G +  A  L D M  + + P+A TY  L+ G C
Sbjct: 321 LFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVC 380

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A+ L   M+  G   + V +N LI+GYC++  V+EAL L   M  KG++  V 
Sbjct: 381 KAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVF 440

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN++  GL ++++ + A  L   M    V+ +T ++ T ID  CK G  VEA  +FR +
Sbjct: 441 AYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREM 500

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +I  YN LIDG  K G ++ A +L   L  R L+ DV T   +IHG C DG++
Sbjct: 501 EEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKV 560

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  LF +M +  + PNV+ +  +I G  +  +  +  +L  +MKE  + PD ++ S +
Sbjct: 561 DMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSL 620

Query: 373 VDLL 376
           V  L
Sbjct: 621 VGSL 624



 Score =  167 bits (423), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 172/341 (50%)

Query: 25  GLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQP 84
            L + G VD     F +M   ++   V +   ++ GLC   D    ++L  E+  +GV+ 
Sbjct: 203 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 262

Query: 85  SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELF 144
           +VVT+N  ++   K   +   + +L LM +  V  N  TY+ L+ GF   GKI  A+ LF
Sbjct: 263 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 322

Query: 145 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 204
             M   G + D   Y  +I+  C++  V+ AL L+ EM  KG+ P+  TY  L  G+ + 
Sbjct: 323 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 382

Query: 205 HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
            Q+E A  L  EMQ   +  +   +NT IDG C++G + EA+ L   +     E D+ AY
Sbjct: 383 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAY 442

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
           N +  GLCK  R + A  L  S+  R +  + +++  +I   C +G   +A  +F +MEE
Sbjct: 443 NSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEE 502

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
               PN+I +  LI G+ +     +  +L  +++ + ++PD
Sbjct: 503 KGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPD 543



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 155/303 (51%)

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R F  M++  V+ +V +  +++D LCK G ++   +L+D +  + V+ N  TY+  ++G+
Sbjct: 215 RFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGY 274

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
                +    E+   ME  G   + V+Y +LI+G+    ++EEA  L+ EM  KGI+  V
Sbjct: 275 FKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADV 334

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y ++         V+ AL LF+EM    +     TY   I G+CK G +  A  L   
Sbjct: 335 YVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNE 394

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     +L+   +N LIDG C+SG ++ AL L   + ++ L +DV  YN +  GLC   +
Sbjct: 395 MQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNR 454

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D+A  L   M E  V+PN + F TLI  + +     +   +  +M+EK  +P+    ++
Sbjct: 455 KDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNV 514

Query: 372 VVD 374
           ++D
Sbjct: 515 LID 517



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 147/309 (47%)

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           + EA   F  M  +G      +  V +  L + G++D   R    MV  DV    ++ + 
Sbjct: 175 FGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 234

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++DG C  G +    +L   + + G K + V+YN  I GY K  ++     +   M  +G
Sbjct: 235 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 294

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +   VVTY  L  G   I ++E A +LFEEM+   + AD   Y + I   C++G +  A+
Sbjct: 295 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 354

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            LF  +           Y  LI G+CK+G++E A  L   +  + +  + V +N +I G 
Sbjct: 355 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 414

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C  G +D+A  L + ME+  +  +V  + ++  G  ++N+  +   LL  M E+ V P+ 
Sbjct: 415 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 474

Query: 367 SIVSMVVDL 375
              + ++D+
Sbjct: 475 MSFTTLIDI 483



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 13/274 (4%)

Query: 94  DELCKNGKMDEASRLLDLMVQRD-VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           D+L K+ K  E   L +     D +R      ++L+D  C   K NRA            
Sbjct: 108 DKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACNESKCNRA------------ 155

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
           K  +  +++L   Y  NK   EAL  +  M  KG      +     L L    QV+  L+
Sbjct: 156 KFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLR 215

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
            F  M   DV     +    +DGLCK G +    +L   +     + ++  YN  I+G  
Sbjct: 216 FFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYF 275

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           K   L    E+   + +  +  +VVTY ++IHG  N G++++A  LF +M E  +  +V 
Sbjct: 276 KRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVY 335

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           ++ ++I    R     + + L  +M +K ++P A
Sbjct: 336 VYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSA 369



 Score = 45.1 bits (105), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 32/53 (60%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           PN VTY  +I GL K+G  ++A  L+ +MK   + PD   Y+SL+  L  A++
Sbjct: 577 PNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSADE 629


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/357 (34%), Positives = 188/357 (52%), Gaps = 3/357 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TY T++DGLCKE  +D+A  L  +M+ E  +P  V YN LI GLC   D     
Sbjct: 218 CLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVT 277

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M  +G  P+ VT+N ++  LC  GK+D+A  LL+ MV     PN  TY TL++G 
Sbjct: 278 KLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGL 337

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +   A  L  SME  G   +   Y++LI+G  K  + EEA+SL+R+M  KG KP +
Sbjct: 338 VKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNI 397

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V Y+ L  GL    +   A ++   M       +  TY++ + G  K G   EAV++++ 
Sbjct: 398 VVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKE 457

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  +   Y+ LIDGLC  GR++ A+ ++  +    +  D V Y+ +I GLC  G 
Sbjct: 458 MDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGS 517

Query: 312 MDKAHDLFLDM---EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           MD A  L+ +M   EE    P+V+ +  L+ G       S+ ++LL+ M ++   PD
Sbjct: 518 MDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPD 574



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 160/298 (53%), Gaps = 3/298 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYNT+I GLC +G +DKA +L  +M      P+ VTY +LI+GL       +A 
Sbjct: 288 CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAV 347

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL   M ++G   +   ++V++  L K GK +EA  L   M ++  +PN   YS L+DG 
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL 407

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK N A+E+   M + GC  +  +Y+ L+ G+ K    EEA+ +++EM   G     
Sbjct: 408 CREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNK 467

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y+ L  GL  + +V+ A+ ++ +M    +  DT  Y++ I GLC  G +  A++L+  
Sbjct: 468 FCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHE 527

Query: 252 LGIL---KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +      K + D+  YN L+DGLC    +  A++L  S+  R    DV+T N  ++ L
Sbjct: 528 MLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 175/363 (48%), Gaps = 15/363 (4%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLI-----HGLCHANDWNEAKR 72
           T +++I+     G  D  + L  +++ EN    V+   S I     +G  H  D  +A  
Sbjct: 79  TLSSMIESYANSGDFDSVEKLLSRIRLEN---RVIIERSFIVVFRAYGKAHLPD--KAVD 133

Query: 73  LFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD----VRPNAFTYSTL 127
           LF  M+D+   + SV +FN +++ +   G         D +V  +    + PN  +++ +
Sbjct: 134 LFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLV 193

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +   C    ++RA E+F  M    C  D  +Y  L++G CK + ++EA+ L  EM S+G 
Sbjct: 194 IKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGC 253

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P+ V YN L  GL +   +    KL + M       +  TYNT I GLC  G + +AV 
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVS 313

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +   KC  +   Y  LI+GL K  R   A+ L  S+  R    +   Y+++I GL 
Sbjct: 314 LLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLF 373

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            +G+ ++A  L+  M E    PN++++  L+ G  R  KP++  E+L++M     +P+A 
Sbjct: 374 KEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAY 433

Query: 368 IVS 370
             S
Sbjct: 434 TYS 436



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 129/260 (49%), Gaps = 24/260 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN V Y+ ++DGLC+EG  ++AK +  +M      P+  TY+SL+ G        EA 
Sbjct: 393 CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAV 452

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +++ EM   G   +   ++V++D LC  G++ EA  +   M+   ++P+   YS+++ G 
Sbjct: 453 QVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGL 512

Query: 132 CLTGKINRAEELFGSM---ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           C  G ++ A +L+  M   E    + D V+YNIL++G C  K++  A+ L   M+ +G  
Sbjct: 513 CGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCD 572

Query: 189 PTVVTYNT---------------------LFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           P V+T NT                     L + L +  +V  A  + E M    +A  TS
Sbjct: 573 PDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTS 632

Query: 228 TYNTFIDGLCKNGYIVEAVE 247
           T+   +  +CK   I  A++
Sbjct: 633 TWAMIVREICKPKKINAAID 652


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 188/352 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTYN ++ GLC+ G +D+ +AL  +M   ++ PD  TY+ L  GL    +      
Sbjct: 261 KPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLS 320

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF E + +GV     T +++++ LCK+GK+ +A ++ +++V   + P    Y+TL++G+C
Sbjct: 321 LFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYC 380

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +  A  +F  M+S   + D ++YN LING CK + V +A  L  EM   G+ P+V 
Sbjct: 381 QVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVE 440

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL        Q+E    +  +MQ+  + +D  ++ + +   CKNG I EAV +   +
Sbjct: 441 TFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDM 500

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  + Q YN +ID   +SG  E AL L   +    + A +VTYN+++ GLC   Q+
Sbjct: 501 IYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQI 560

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           D+A +L   +    + P+V+ + T+I          K +ELL +M +  + P
Sbjct: 561 DEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 612



 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 188/357 (52%), Gaps = 2/357 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +YN +I GL + G    A  +F +M    + P+ +TYN++I G     D     RL
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRL 251

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+  G +P+VVT+NV++  LC+ G+MDE   L+D M    + P+ FTYS L DG   
Sbjct: 252 RDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTR 311

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG+      LF      G      + +IL+NG CK+ +V +A  ++  +V  G+ PT V 
Sbjct: 312 TGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVI 371

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G  ++  +  A  +FE+M+   +  D  TYN  I+GLCK   + +A +L   + 
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +  ++ +N LID    +G+LE    +   + ++ + +DV+++  ++   C +G++ 
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +A  +  DM    VAPN  ++ ++I  ++      + + L+ KMK   V   ASIV+
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGV--SASIVT 546



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 182/348 (52%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T + +++GLCK+G V KAK +F  +    + P  V YN+LI+G C   D   A  +F +M
Sbjct: 336 TCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 395

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
             + ++P  +T+N +++ LCK   + +A  L+  M +  V P+  T++TL+D +   G++
Sbjct: 396 KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQL 455

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
            +   +   M+  G K D +S+  ++  +CKN ++ EA+++  +M+ K + P    YN++
Sbjct: 456 EKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSI 515

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
                E    E AL L E+M+   V+A   TYN  + GLC++  I EA EL  TL     
Sbjct: 516 IDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGL 575

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D+ +YN +I   C  G  + ALEL + + +  +   + T + ++  L + G++     
Sbjct: 576 RPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMEC 635

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           L+  M    V P+  I+  ++  +VR    SKV  L  +M EK +  D
Sbjct: 636 LYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 185/369 (50%), Gaps = 2/369 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINP-DVVTYNSLIHGLCHAN 65
           +    +P+T  +N ++      G +D A A+  +M + E   P D  +YN +I GL  + 
Sbjct: 149 VAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSG 208

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             ++A ++F EM+D GV P+ +T+N ++D   K G ++   RL D M+    +PN  TY+
Sbjct: 209 KGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYN 268

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+ G C TG+++    L   M S     D  +Y+IL +G  +  E +  LSL+ E + K
Sbjct: 269 VLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKK 328

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G+     T + L  GL +  +V  A ++FE +    +   T  YNT I+G C+   +  A
Sbjct: 329 GVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGA 388

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             +F  +       D   YN LI+GLCK   +  A +L   + +  +   V T+N +I  
Sbjct: 389 FCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDA 448

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
               GQ++K   +  DM++  +  +VI F +++  F +  K  + + +L  M  K V P+
Sbjct: 449 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPN 508

Query: 366 ASIVSMVVD 374
           A + + ++D
Sbjct: 509 AQVYNSIID 517



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 142/261 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ +TYN +I+GLCK   V KA+ L ++M+   ++P V T+N+LI     A    +   
Sbjct: 401 RPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFT 460

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M  +G++  V++F  ++   CKNGK+ EA  +LD M+ +DV PNA  Y++++D + 
Sbjct: 461 VLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYI 520

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G   +A  L   M++ G     V+YN+L+ G C++ +++EA  L   + ++G++P VV
Sbjct: 521 ESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 580

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNT+          + AL+L +EM +  +     T +T +  L   G + +   L++ +
Sbjct: 581 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQM 640

Query: 253 GILKCELDIQAYNCLIDGLCK 273
                E     Y  ++D   +
Sbjct: 641 LHKNVEPSSSIYGIMVDAYVR 661



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 141/284 (49%), Gaps = 2/284 (0%)

Query: 84  PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEEL 143
           PS+ + N++++ L   G+  +      L+V    RP+ F ++ ++      G ++ A  +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 144 FGSM-ESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
              M  S G    D  SYN++I G  ++ +  +AL ++ EMV  G+ P  +TYNT+  G 
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
            +   +E   +L ++M  D    +  TYN  + GLC+ G + E   L   +       D 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDG 299

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
             Y+ L DGL ++G  +  L LF    ++ ++    T +I+++GLC DG++ KA  +F  
Sbjct: 300 FTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEM 359

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +    + P  +I+ TLI+G+ ++        +  +MK + + PD
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPD 403



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 93/174 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   YN+IID   + G  ++A  L  +MK   ++  +VTYN L+ GLC ++  +EA+ L
Sbjct: 507 PNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 566

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            + + +QG++P VV++N I+   C  G  D+A  LL  M +  +RP   T  TL+     
Sbjct: 567 IYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALAS 626

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
            G+++  E L+  M     +     Y I+++ Y + +   +  SL +EM  KGI
Sbjct: 627 AGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 106/213 (49%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + +++ +++   CK G + +A A+   M  +++ P+   YNS+I     + D  +A  
Sbjct: 471 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALL 530

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M + GV  S+VT+N+++  LC++ ++DEA  L+  +  + +RP+  +Y+T++   C
Sbjct: 531 LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACC 590

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  ++A EL   M   G +    + + L++       V +   LY++M+ K ++P+  
Sbjct: 591 NKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSS 650

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
            Y  +               L +EM    +A D
Sbjct: 651 IYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 75/141 (53%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTYN ++ GLC+   +D+A+ L   ++ + + PDVV+YN++I   C+  D ++A  L  E
Sbjct: 545 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 604

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M   G++P++ T + ++  L   G++ +   L   M+ ++V P++  Y  ++D +     
Sbjct: 605 MNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCEN 664

Query: 137 INRAEELFGSMESMGCKHDDV 157
            ++   L   M   G   DD 
Sbjct: 665 DSKVASLKKEMSEKGIAFDDT 685


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 110/323 (34%), Positives = 185/323 (57%), Gaps = 3/323 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N VT++ +I+GLCK G   KA  +   MK    +P V+TYN++I G C A    +A  L 
Sbjct: 228 NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALL 287

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ + + P+ +TFN+++D  C++  +  A ++ + M ++ ++PN  TY++L++G C  
Sbjct: 288 KEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSN 347

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK++ A  L   M  MG K + V+YN LING+CK K ++EA  +  ++  +G+ P V+T+
Sbjct: 348 GKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITF 407

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           NTL     +  +++ A  L   M    V  + STYN  I G C+ G + EA +L + +  
Sbjct: 408 NTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEG 467

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP---RRVLVADVVTYNIMIHGLCNDGQ 311
              + D+  YN L+D LCK G    A+ L   +    ++   A++VTYN++I G CN G+
Sbjct: 468 NGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGK 527

Query: 312 MDKAHDLFLDMEENAVAPNVIIF 334
           +++A+ L  +M E  + PN   +
Sbjct: 528 LEEANRLLNEMLEKGLIPNRTTY 550



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 120/363 (33%), Positives = 203/363 (55%), Gaps = 3/363 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + ++ N ++  L KEG +   ++++ +M    I  +VVT++ +I+GLC    + +A  + 
Sbjct: 193 SALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVV 252

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M   G  PSV+T+N I+D  CK GKM +A  LL  MV + + PN  T++ L+DGFC  
Sbjct: 253 EDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRD 312

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
             +  A+++F  M+  G + + V+YN LING C N +++EAL L  +M   G+KP VVTY
Sbjct: 313 ENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTY 372

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L  G  +   ++ A ++ +++ +  +A +  T+NT ID   K G + +A  L   +  
Sbjct: 373 NALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLD 432

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                ++  YNCLI G C+ G ++ A +L + +    L AD+VTYNI++  LC  G+  K
Sbjct: 433 TGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRK 492

Query: 315 AHDLFLDM---EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           A  L  +M   E+     N++ +  LI GF    K  +   LL++M EK ++P+ +   +
Sbjct: 493 AVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDI 552

Query: 372 VVD 374
           + D
Sbjct: 553 LRD 555



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 111/292 (38%), Positives = 169/292 (57%), Gaps = 3/292 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TYNTIIDG CK G + KA AL  +M  + I+P+ +T+N LI G C   +   AK++
Sbjct: 262 PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKV 321

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM  QG+QP+VVT+N +++ LC NGK+DEA  L D M    ++PN  TY+ L++GFC 
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +  A E+   +   G   + +++N LI+ Y K   +++A  L   M+  G+ P V T
Sbjct: 382 KKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVST 441

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L +G      V+ A KL +EM+ + + AD  TYN  +D LCK G   +AV L   + 
Sbjct: 442 YNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMT 501

Query: 254 ILKCE---LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
           +++ +    +I  YN LI G C  G+LE A  L   +  + L+ +  TY+I+
Sbjct: 502 LMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 89/233 (38%), Positives = 135/233 (57%), Gaps = 3/233 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTYN++I+GLC  G +D+A  L  +M G  + P+VVTYN+LI+G C      EA+ 
Sbjct: 331 QPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEARE 390

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  ++  +G+ P+V+TFN ++D   K G+MD+A  L  +M+   V PN  TY+ L+ GFC
Sbjct: 391 MLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFC 450

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV---SKGIKP 189
             G +  A +L   ME  G K D V+YNIL++  CK  E  +A+ L  EM     KG + 
Sbjct: 451 REGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRA 510

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
            +VTYN L  G     ++E A +L  EM    +  + +TY+   D + + G+I
Sbjct: 511 NIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFI 563



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 159/298 (53%)

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           D G + S ++ N ++  L K G++     +   M++R +  N  T+  +++G C  GK  
Sbjct: 187 DYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQ 246

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
           +A ++   M++ G     ++YN +I+GYCK  ++ +A +L +EMV+K I P  +T+N L 
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILI 306

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            G      V  A K+FEEMQR  +  +  TYN+ I+GLC NG + EA+ L   +  +  +
Sbjct: 307 DGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLK 366

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            ++  YN LI+G CK   L+ A E+   + +R L  +V+T+N +I      G+MD A  L
Sbjct: 367 PNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLL 426

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              M +  V PNV  +  LI GF R     +  +L  +M+   +  D    +++VD L
Sbjct: 427 RSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDAL 484



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 164/341 (48%), Gaps = 17/341 (4%)

Query: 50  DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTF-------------NVIMDEL 96
           +V  +  L+H L +A ++N+ + L           +   F             ++I+D L
Sbjct: 106 NVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDML 165

Query: 97  C----KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
                KNG+MD A    D       R +A + + ++      G+I   E ++  M     
Sbjct: 166 VWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRI 225

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
             + V+++++ING CK  + ++A  +  +M + G  P+V+TYNT+  G  +  ++  A  
Sbjct: 226 GVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADA 285

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           L +EM    +  +  T+N  IDG C++  +  A ++F  +     + ++  YN LI+GLC
Sbjct: 286 LLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLC 345

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
            +G+L+ AL L   +    L  +VVTYN +I+G C    + +A ++  D+ +  +APNVI
Sbjct: 346 SNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVI 405

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            F TLI  + +  +      L   M +  V P+ S  + ++
Sbjct: 406 TFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 107/192 (55%), Gaps = 3/192 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G+  KPN VTYN +I+G CK+  + +A+ +   +    + P+V+T+N+LI     A   +
Sbjct: 362 GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMD 421

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  L   M+D GV P+V T+N ++   C+ G + EA +L   M    ++ +  TY+ L+
Sbjct: 422 DAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILV 481

Query: 129 DGFCLTGKINRAEELFGS---MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           D  C  G+  +A  L      ME  G + + V+YN+LI G+C   ++EEA  L  EM+ K
Sbjct: 482 DALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEK 541

Query: 186 GIKPTVVTYNTL 197
           G+ P   TY+ L
Sbjct: 542 GLIPNRTTYDIL 553


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 202/365 (55%), Gaps = 6/365 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN  TY  +I GL + G ++ A  L+ +M  E + P+ VTYN+LI+ LC    ++ A 
Sbjct: 334 CRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTAL 393

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++F  M   G   +  T+N I+  LC  G +++A  L + M++    P   TY+TL++G+
Sbjct: 394 KIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGY 453

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G +N A  L   M+  GC+ D+ +YN L++G+ K  ++E A   ++EMV  G+ P  
Sbjct: 454 LTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNP 513

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+Y  L  G  +  +V+ AL L + M+      +  +YN  I+GL K     EA ++   
Sbjct: 514 VSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDK 573

Query: 252 L---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           +   G+L    ++  Y  LIDGLC++GR + A ++F  + +R  + ++ TY+ +I+GLC 
Sbjct: 574 MVEQGLLP---NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ 630

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           +G+ D+A  L  +ME   +AP+ + F +LI GFV + +      LL +M +    P+   
Sbjct: 631 EGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRT 690

Query: 369 VSMVV 373
            S+++
Sbjct: 691 YSVLL 695



 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 196/364 (53%), Gaps = 4/364 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN+VTY+T+I+GLC EG VD+A  +  +M  + I P V TY   I  LC      EA 
Sbjct: 264 CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAI 323

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M  +G +P+V T+  ++  L + GK++ A  L   M++  + PN  TY+ L++  
Sbjct: 324 ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINEL 383

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C+ G+ + A ++F  ME  G   +  +YN +I G C   ++E+A+ L+ +M+  G  PTV
Sbjct: 384 CVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTV 443

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  G      V +A +L + M+ +    D  TYN  + G  K G +  A   F+ 
Sbjct: 444 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 503

Query: 252 LGILKCELDIQ--AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           +  ++C L+    +Y  LIDG  K G+++IAL L + +       +V +YN +I+GL  +
Sbjct: 504 M--VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKE 561

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            +  +A  +   M E  + PNVI + TLI G  R  +     ++ H M+++K +P+    
Sbjct: 562 NRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTY 621

Query: 370 SMVV 373
           S ++
Sbjct: 622 SSLI 625



 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 115/330 (34%), Positives = 176/330 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNTVTYN +I+ LC  G    A  +F  M+G     +  TYN +I GLC   D  +A  L
Sbjct: 371 PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 430

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+  G  P+VVT+N +++     G ++ A+RLLDLM +    P+ +TY+ L+ GF  
Sbjct: 431 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 490

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A   F  M   G   + VSY  LI+G+ K+ +V+ ALSL + M   G  P V +
Sbjct: 491 WGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVES 550

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GL + ++   A K+ ++M    +  +  TY T IDGLC+NG    A ++F  + 
Sbjct: 551 YNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 610

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             KC  ++  Y+ LI GLC+ G+ + A  L + + R+ L  D VT+  +I G    G++D
Sbjct: 611 KRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRID 670

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            A  L   M +    PN   +  L+ G  +
Sbjct: 671 HAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 205/399 (51%), Gaps = 35/399 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ +T+NT+I+ L K+G V +A+ +  Q+   +++PDV TY SLI G C   + + A  
Sbjct: 195 QPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFG 254

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  M+ +G  P+ VT++ +++ LC  G++DEA  +L+ M+++ + P  +TY+  +   C
Sbjct: 255 VFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 314

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                  A EL   M+  GC+ +  +Y  LI+G  +  ++E A+ LY +M+ +G+ P  V
Sbjct: 315 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV 374

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF--- 249
           TYN L   L    +   ALK+F  M+     A+T TYN  I GLC  G I +A+ LF   
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 434

Query: 250 -----------------------------RTLGILK---CELDIQAYNCLIDGLCKSGRL 277
                                        R L ++K   CE D   YN L+ G  K G+L
Sbjct: 435 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 494

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           E A   F+ +    L  + V+Y  +I G   DG++D A  L   MEE    PNV  +  +
Sbjct: 495 ESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAV 554

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           I+G  + N+ S+  ++  KM E+ ++P+    + ++D L
Sbjct: 555 INGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGL 593



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/296 (35%), Positives = 160/296 (54%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+ L+ +M++ G+QPS++TFN +++ L K GK+ EA  +L  + Q D+ P+ FTY++L+ 
Sbjct: 182 ARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLIL 241

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C    ++ A  +F  M   GC  + V+Y+ LING C    V+EAL +  EM+ KGI+P
Sbjct: 242 GHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEP 301

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           TV TY      L  I   E A++L   M++     +  TY   I GL + G +  A+ L+
Sbjct: 302 TVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLY 361

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +       +   YN LI+ LC  GR   AL++F  +     +A+  TYN +I GLC  
Sbjct: 362 HKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLG 421

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           G ++KA  LF  M +    P V+ + TLI+G++     +    LL  MKE    PD
Sbjct: 422 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPD 477



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 179/355 (50%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           NT++  L K   V+ A+ L+ QM    I P ++T+N+LI+ L       EA+ +  ++  
Sbjct: 167 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 226

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
             + P V T+  ++   C+N  +D A  + D MV+    PN+ TYSTL++G C  G+++ 
Sbjct: 227 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 286

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A ++   M   G +    +Y + I   C  +  EEA+ L   M  +G +P V TY  L  
Sbjct: 287 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 346

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           GL  + ++E A+ L+ +M ++ +  +T TYN  I+ LC  G    A+++F  +       
Sbjct: 347 GLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA 406

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           + Q YN +I GLC  G +E A+ LF  + +   +  VVTYN +I+G    G ++ A  L 
Sbjct: 407 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 466

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             M+EN   P+   +  L+ GF +  K         +M E  + P+    + ++D
Sbjct: 467 DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALID 521



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 123/233 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+  TYN ++ G  K G ++ A   F +M    +NP+ V+Y +LI G       + A 
Sbjct: 474 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIAL 533

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M + G  P+V ++N +++ L K  +  EA ++ D MV++ + PN  TY+TL+DG 
Sbjct: 534 SLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGL 593

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+   A ++F  ME   C  +  +Y+ LI G C+  + +EA  L +EM  KG+ P  
Sbjct: 594 CRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDE 653

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           VT+ +L  G   + +++HA  L   M       +  TY+  + GL K   ++E
Sbjct: 654 VTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLE 706



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 145/299 (48%)

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
           E+   G   S+ + N ++ +L K   ++ A  L   M+   ++P+  T++TL++     G
Sbjct: 153 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 212

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           K+  AE +   +       D  +Y  LI G+C+N+ ++ A  ++  MV +G  P  VTY+
Sbjct: 213 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 272

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           TL  GL    +V+ AL + EEM    +     TY   I  LC   +  EA+EL   +   
Sbjct: 273 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
            C  ++Q Y  LI GL + G+LE+A+ L+  + +  LV + VTYN +I+ LC  G+   A
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +F  ME +    N   +  +I G        K + L  KM +   +P     + +++
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLIN 451



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 125/241 (51%)

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           +I R  +    +  MG      S N L+    K + VE A +LY++M++ GI+P+++T+N
Sbjct: 143 EIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFN 202

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           TL   L +  +V  A  +  ++ + D++ D  TY + I G C+N  +  A  +F  +   
Sbjct: 203 TLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKE 262

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
            C+ +   Y+ LI+GLC  GR++ AL++   +  + +   V TY + I  LC     ++A
Sbjct: 263 GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEA 322

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
            +L   M++    PNV  +  LI G  R+ K    I L HKM ++ ++P+    + +++ 
Sbjct: 323 IELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINE 382

Query: 376 L 376
           L
Sbjct: 383 L 383



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 1/217 (0%)

Query: 161 ILINGYCKNKE-VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           IL+   C+N+E +        E+   G   ++ + NTL + L +   VE A  L+++M  
Sbjct: 132 ILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLN 191

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
             +     T+NT I+ L K G + EA  +   +       D+  Y  LI G C++  L++
Sbjct: 192 SGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL 251

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A  +F  + +     + VTY+ +I+GLCN+G++D+A D+  +M E  + P V  +   I 
Sbjct: 252 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 311

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               I    + IEL+ +MK++   P+    + ++  L
Sbjct: 312 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 348


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/359 (33%), Positives = 189/359 (52%), Gaps = 1/359 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T N  I GLC++G +++A AL  +M G  + PDVVTYN+L+ GLC  +   EA +  
Sbjct: 245 NKFTCNIWIRGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYL 303

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             MM+QG  P   T+N I+D  CK+G + EA+ LL   V +   P+  TY +L++G C  
Sbjct: 304 GRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAE 363

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G I RA ELF   ++   K D V YN L+ G C+   +  AL +  EMV +G  P + TY
Sbjct: 364 GDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTY 423

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N +  GL ++  +  A  +  +        D  T+NT IDG CK   +  A++L   +  
Sbjct: 424 NIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWT 483

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D+  YN +++GLCK+G+ +   E F  +  +    + +TYNI+I   C   Q+++
Sbjct: 484 YGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEE 543

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A  + + M ++ + P+ + F TLIHGF R         L  K+ EK     A   ++++
Sbjct: 544 ASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILI 602



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 196/352 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY ++I+GLC EG +++A  LF + + +++ PD+V YNSL+ GLC       A ++
Sbjct: 348 PDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQV 407

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+++G  P + T+N+I++ LCK G + +A+ +++  + +   P+ FT++TL+DG+C 
Sbjct: 408 MNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCK 467

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K++ A +L   M + G   D ++YN ++NG CK  + +E    + EM+ KG +P  +T
Sbjct: 468 RLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAIT 527

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L     +I+Q+E A  +   M +D +  D  ++NT I G C+NG +  A  LF+ L 
Sbjct: 528 YNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLD 587

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                     +N LI        +++A ++F  +  +    D+ TY I++ GLC    +D
Sbjct: 588 EKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVD 647

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A+    +M      P++  F  +++     ++ S+ + ++H M    V+P+
Sbjct: 648 RAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPE 699



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 182/365 (49%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TYNTIIDG CK G + +A  L      +   PD VTY SLI+GLC   D   A 
Sbjct: 311 CIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERAL 370

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF E   + ++P +V +N ++  LC+ G +  A ++++ MV+    P+ +TY+ +++G 
Sbjct: 371 ELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGL 430

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I+ A  +       G   D  ++N LI+GYCK  +++ AL L   M + GI P V
Sbjct: 431 CKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDV 490

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYN++  GL +  + +   + FEEM       +  TYN  I+  CK   + EA  +   
Sbjct: 491 ITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVR 550

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D  ++N LI G C++G L+ A  LF+ L  +   A   T+NI+I    +   
Sbjct: 551 MCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLN 610

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           M  A  +F +M      P++  +  L+ G  +     +    L +M  K  +P  +    
Sbjct: 611 MQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGR 670

Query: 372 VVDLL 376
           +++LL
Sbjct: 671 MLNLL 675



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 171/364 (46%), Gaps = 1/364 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
            C P    YN I+D L    + D+A  ++++M    + PD  T+   +   C     + A
Sbjct: 101 ACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVA 160

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            RL   + ++G       +  ++  L  +G    A  L D M+ RDV P+  T++ ++  
Sbjct: 161 LRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHA 220

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  G +  +  L   +   G   +  + NI I G C++  +EEA++L   M +  + P 
Sbjct: 221 LCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPD 279

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTYNTL  GL +  +V+ A +    M       D  TYNT IDG CK+G + EA EL +
Sbjct: 280 VVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLK 339

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
                    D   Y  LI+GLC  G +E ALELF     + L  D+V YN ++ GLC  G
Sbjct: 340 DAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 399

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            +  A  +  +M E    P++  +  +I+G  ++   S    +++    K  +PD    +
Sbjct: 400 LILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFN 459

Query: 371 MVVD 374
            ++D
Sbjct: 460 TLID 463



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 176/395 (44%), Gaps = 37/395 (9%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVT--YNSLIHGLCHANDWNEAKRLFF 75
            Y  +I  L   G +D   A     +  ++ PD +   Y + I     A     A   F 
Sbjct: 37  AYRALIRELVSAGRLDDVDAALASAR-SHLAPDSLQPLYVASIQAYARAGRLRAAVDAFE 95

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
            M      P+   +N IMD L      D+A ++   M+   V P+A T++  +  FCLTG
Sbjct: 96  RMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTG 155

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           + + A  L  S+   GC     +Y  ++ G   +     A  L+ EM+ + + P V T+N
Sbjct: 156 RPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFN 215

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
            +   L +   V  +  L  ++ +  ++A+  T N +I GLC++G + EAV L   +G  
Sbjct: 216 NVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY 275

Query: 256 ----------------------------------KCELDIQAYNCLIDGLCKSGRLEIAL 281
                                              C  D   YN +IDG CKSG L+ A 
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEAT 335

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           EL +    +  V D VTY  +I+GLC +G +++A +LF + +   + P+++++ +L+ G 
Sbjct: 336 ELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGL 395

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            R       ++++++M E+   PD    +++++ L
Sbjct: 396 CRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGL 430


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 194/357 (54%), Gaps = 1/357 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN ++YN +I+GLC+EG + +   +  +M     + D VTYN+LI G C   ++++A  
Sbjct: 272 EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALV 331

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM+  G+ PSV+T+  ++  +CK G M+ A   LD M  R + PN  TY+TL+DGF 
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +N A  +   M   G     V+YN LING+C   ++E+A+++  +M  KG+ P VV
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y+T+  G    + V+ AL++  EM    +  DT TY++ I G C+     EA +L+  +
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +    D   Y  LI+  C  G LE AL+L   +  + ++ DVVTY+++I+GL    + 
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            +A  L L +      P+ + + TLI     I   S V+ L+     K +M +A  V
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKS-VVSLIKGFCMKGMMTEADQV 627



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 189/353 (53%), Gaps = 1/353 (0%)

Query: 14  PNTVTYNTIIDGLCKEGF-VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           P  ++YN ++D   +    +  A+ +F +M    ++P+V TYN LI G C A + + A  
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF +M  +G  P+VVT+N ++D  CK  K+D+  +LL  M  + + PN  +Y+ +++G C
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++     +   M   G   D+V+YN LI GYCK     +AL ++ EM+  G+ P+V+
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY +L   + +   +  A++  ++M+   +  +  TY T +DG  + GY+ EA  + R +
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   +  YN LI+G C +G++E A+ +   +  + L  DVV+Y+ ++ G C    +
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           D+A  +  +M E  + P+ I + +LI GF    +  +  +L  +M    + PD
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 189/361 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN +I G C  G +D A  LF +M+ +   P+VVTYN+LI G C     ++  +L
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +G++P+++++NV+++ LC+ G+M E S +L  M +R    +  TY+TL+ G+C 
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  ++A  +   M   G     ++Y  LI+  CK   +  A+    +M  +G+ P   T
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G  +   +  A ++  EM  +  +    TYN  I+G C  G + +A+ +   + 
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+ +Y+ ++ G C+S  ++ AL + R +  + +  D +TY+ +I G C   +  
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A DL+ +M    + P+   +  LI+ +       K ++L ++M EK V+PD    S+++
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562

Query: 374 D 374
           +
Sbjct: 563 N 563



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/390 (31%), Positives = 191/390 (48%), Gaps = 59/390 (15%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTYNT+I G CKEG   +A  +  +M    + P V+TY SLIH +C A + N A     +
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M  +G+ P+  T+  ++D   + G M+EA R+L  M      P+  TY+ L++G C+TGK
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +  A  +   M+  G   D VSY+ +++G+C++ +V+EAL + REMV KGIKP  +TY++
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---G 253
           L  G  E  + + A  L+EEM R  +  D  TY   I+  C  G + +A++L   +   G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIA----LELF--RSLPRRVLV-------------- 293
           +L    D+  Y+ LI+GL K  R   A    L+LF   S+P  V                
Sbjct: 551 VLP---DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKS 607

Query: 294 ------------------------------ADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
                                          D   YNIMIHG C  G + KA+ L+ +M 
Sbjct: 608 VVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMV 667

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
           ++    + +  + L+     ++K  KV EL
Sbjct: 668 KSGFLLHTVTVIALVKA---LHKEGKVNEL 694



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 173/316 (54%), Gaps = 15/316 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY T++DG  ++G++++A  +  +M     +P VVTYN+LI+G C      +A  +
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV 437

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M ++G+ P VV+++ ++   C++  +DEA R+   MV++ ++P+  TYS+L+ GFC 
Sbjct: 438 LEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCE 497

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +   A +L+  M  +G   D+ +Y  LIN YC   ++E+AL L+ EMV KG+ P VVT
Sbjct: 498 QRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVT 557

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID---------------GLCK 238
           Y+ L  GL +  +   A +L  ++  ++      TY+T I+               G C 
Sbjct: 558 YSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCM 617

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
            G + EA ++F ++     + D  AYN +I G C++G +  A  L++ + +   +   VT
Sbjct: 618 KGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVT 677

Query: 299 YNIMIHGLCNDGQMDK 314
              ++  L  +G++++
Sbjct: 678 VIALVKALHKEGKVNE 693



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 184/365 (50%), Gaps = 1/365 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN-DWNE 69
           +C   +  ++ ++    +   +DKA ++    +     P V++YN+++     +  + + 
Sbjct: 129 LCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISF 188

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+ +F EM++  V P+V T+N+++   C  G +D A  L D M  +   PN  TY+TL+D
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+C   KI+   +L  SM   G + + +SYN++ING C+   ++E   +  EM  +G   
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             VTYNTL  G  +      AL +  EM R  +     TY + I  +CK G +  A+E  
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             + +     + + Y  L+DG  + G +  A  + R +        VVTYN +I+G C  
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G+M+ A  +  DM+E  ++P+V+ + T++ GF R     + + +  +M EK + PD    
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488

Query: 370 SMVVD 374
           S ++ 
Sbjct: 489 SSLIQ 493



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 111/196 (56%), Gaps = 15/196 (7%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+T+TY+++I G C++    +A  L+ +M    + PD  TY +LI+  C   D  +A +
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD--- 129
           L  EM+++GV P VVT++V+++ L K  +  EA RLL  +   +  P+  TY TL++   
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601

Query: 130 ------------GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
                       GFC+ G +  A+++F SM     K D  +YNI+I+G+C+  ++ +A +
Sbjct: 602 NIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYT 661

Query: 178 LYREMVSKGIKPTVVT 193
           LY+EMV  G     VT
Sbjct: 662 LYKEMVKSGFLLHTVT 677


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 196/396 (49%), Gaps = 35/396 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V YNT+IDG CK G +  A  +   M  + INP+ VT NS+I G C      +A+ +
Sbjct: 416 PNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECI 475

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+ +G   +   F  I+  LC N + + A R L  M+ R++RPN    +TL+ G C 
Sbjct: 476 LEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCK 535

Query: 134 TGKINRAEELFGSMESMG---------------CKH--------------------DDVS 158
            GK + A EL+  +   G               CK                     D ++
Sbjct: 536 EGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKIT 595

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN LI+G CK  +VEE   L  EMV +GI+P   TYN L  G+  I +++ A+ L+ E +
Sbjct: 596 YNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECK 655

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
             D+  +  TY   IDG CK   I E  +LF  L     EL+   YN LI   C++G   
Sbjct: 656 SRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTV 715

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +L   +  + +     TY+ +IHG+CN G+M+ A  L  +M +  + PNV+ +  LI
Sbjct: 716 EAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALI 775

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            G+ ++ +  KV+ +L +M    + P+    ++++D
Sbjct: 776 GGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMID 811



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 199/391 (50%), Gaps = 41/391 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVT------------------ 53
           PN+VT N+II G CK G +++A+ +  +M  +G +INP   T                  
Sbjct: 451 PNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRF 510

Query: 54  ---------------YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                            +L+ GLC     ++A  L+F ++++G   ++VT N ++  LCK
Sbjct: 511 LREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCK 570

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
            G M EA RLL  M++R    +  TY+TL+ G C  GK+    +L G M   G + D  +
Sbjct: 571 TGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFT 630

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN+LI+G C+  +++EA++L+ E  S+ + P V TY  +  G  +  ++E   KLF E+ 
Sbjct: 631 YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELL 690

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVEL---FRTLGILKCELDIQAYNCLIDGLCKSG 275
             ++  ++  YNT I   C+NG  VEA +L    R+ GI         Y+ LI G+C  G
Sbjct: 691 TQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPP---TTATYSSLIHGMCNIG 747

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           R+E A  L   + +  L+ +VV Y  +I G C  GQMDK  ++  +M    + PN I + 
Sbjct: 748 RMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYT 807

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            +I G+ +        +LLH+M  K ++PD 
Sbjct: 808 VMIDGYSKSGDMKTAAKLLHEMVGKGIVPDT 838



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 113/329 (34%), Positives = 178/329 (54%), Gaps = 6/329 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N VT N +I GLCK G + +A  L  +M       D +TYN+LI G C      E  +L 
Sbjct: 557 NLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLR 616

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ QG++P   T+N+++  +C+ GK+DEA  L +    RD+ PN +TY  ++DG+C  
Sbjct: 617 GEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKA 676

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            KI   E+LF  + +   + + V YN LI  YC+N    EA  L+ +M SKGI PT  TY
Sbjct: 677 DKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATY 736

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           ++L  G+  I ++E A  L +EM+++ +  +   Y   I G CK G + + V + + +  
Sbjct: 737 SSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSS 796

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                +   Y  +IDG  KSG ++ A +L   +  + +V D VTYN++ +G C +G++++
Sbjct: 797 YDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEE 856

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
              L     E+ V  N  +F  LIH   R
Sbjct: 857 GKLL----AEDGVGFNSPLF--LIHEAFR 879



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 184/333 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTYN +I GLCK G +D+A     +M  + +N  ++TY+ LI+GL     +NEA  +
Sbjct: 346 PNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSV 405

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             E +++G  P+ V +N ++D  CK G + +A R+   MV + + PN+ T ++++ GFC 
Sbjct: 406 LKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCK 465

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++ +AE +   M S G   +  ++  +I+  C N   E AL   REM+ + ++P    
Sbjct: 466 IGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGL 525

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
             TL  GL +  +   A++L+  +      A+  T N  I GLCK G + EAV L + + 
Sbjct: 526 LTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKML 585

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                LD   YN LI G CK G++E   +L   + ++ +  D  TYN++IHG+C  G++D
Sbjct: 586 ERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLD 645

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +A +L+ + +   + PNV  +  +I G+ + +K
Sbjct: 646 EAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 678



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 195/396 (49%), Gaps = 36/396 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   T   ++  L K   ++K+  +F  M+ + ++PDV  +++ I+  C      +A +L
Sbjct: 277 PTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQL 335

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           FF+M   GV P+VVT+N ++  LCK+G +DEA R  + MV+  V     TYS L++G   
Sbjct: 336 FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMK 395

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K N A  +       G   ++V YN LI+GYCK   + +AL +  +MVSKGI P  VT
Sbjct: 396 LEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVT 455

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI-------------------- 233
            N++  G  +I Q+E A  + EEM     + +   + T I                    
Sbjct: 456 LNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREML 515

Query: 234 ---------------DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                           GLCK G   +AVEL+  L       ++   N LI GLCK+G ++
Sbjct: 516 LRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQ 575

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A+ L + +  R  V D +TYN +I G C +G++++   L  +M +  + P+   +  LI
Sbjct: 576 EAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLI 635

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           HG  RI K  + + L ++ K + ++P+     +++D
Sbjct: 636 HGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMID 671



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 145/279 (51%), Gaps = 18/279 (6%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+T TYN +I G+C+ G +D+A  L+ + K  ++ P+V TY  +I G C A+   E ++
Sbjct: 625 EPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEK 684

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF E++ Q ++ + V +N ++   C+NG   EA +L D M  + + P   TYS+L+ G C
Sbjct: 685 LFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMC 744

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A+ L   M   G   + V Y  LI GYCK  ++++ +++ +EM S  I P  +
Sbjct: 745 NIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKI 804

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  +  G  +   ++ A KL  EM    +  DT TYN   +G CK G I E        
Sbjct: 805 TYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEE-------- 856

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
           G L  E          DG+  +  L +  E FR+  RRV
Sbjct: 857 GKLLAE----------DGVGFNSPLFLIHEAFRACTRRV 885



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 153/313 (48%), Gaps = 4/313 (1%)

Query: 51  VVTYNSLIHGLC---HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR 107
           V   + LIH  C       +  A  +F  + ++GV P+V T   ++  L K  +++++  
Sbjct: 241 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW 300

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
           + + M Q  V P+ + +ST ++ FC  GK+  A +LF  ME +G   + V+YN LI+G C
Sbjct: 301 VFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLC 359

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           K+  ++EA     +MV  G+  T++TY+ L  GL ++ +   A  + +E        +  
Sbjct: 360 KHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEV 419

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
            YNT IDG CK G + +A+ +   +       +    N +I G CK G++E A  +   +
Sbjct: 420 VYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM 479

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
             R    +   +  +IH LC + + + A     +M    + PN  +  TL+ G  +  K 
Sbjct: 480 LSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKH 539

Query: 348 SKVIELLHKMKEK 360
           S  +EL  ++ EK
Sbjct: 540 SDAVELWFRLLEK 552



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 39/221 (17%)

Query: 157 VSYNILINGYC---KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            + ++LI+ YC   +N     A+ ++R + +KG+ PTV T   L   L + +++E +  +
Sbjct: 242 AAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWV 301

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
           FE M R  V+ D                    V LF T                I+  CK
Sbjct: 302 FETM-RQGVSPD--------------------VYLFSTA---------------INAFCK 325

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
            G++E A++LF  + +  +  +VVTYN +IHGLC  G +D+A      M ++ V   +I 
Sbjct: 326 GGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLIT 385

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +  LI+G +++ K ++   +L +  EK   P+  + + ++D
Sbjct: 386 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLID 426


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/362 (33%), Positives = 197/362 (54%), Gaps = 3/362 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN ++YN II+GLC+EG + +A  +  +M  +   PD VTYN+L++G C   ++++A  
Sbjct: 77  QPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALV 136

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM+  GV PSVVT+  +++ +CK   ++ A    D M  R +RPN  TY+TL+DGF 
Sbjct: 137 IHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFS 196

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +N A  +   M   G     V+YN  I+G+C  + +EEAL + +EMV KG+ P VV
Sbjct: 197 RQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVV 256

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y+T+  G     +++ A ++ +EM    V+ D  TY++ I GLC+   + EA +L + +
Sbjct: 257 SYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEM 316

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +    D   Y  LI+  C  G L  AL L   +  +  + D VTY+++I+GL    + 
Sbjct: 317 LDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQART 376

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV--S 370
            +A  L   +      P+ + + TLI     I   S V+ L+     K +M +A  V  S
Sbjct: 377 REAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKS-VVALIKGFCMKGLMHEADRVFES 435

Query: 371 MV 372
           MV
Sbjct: 436 MV 437



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 177/328 (53%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           ++P+V TYN LI G C   +  +    F EM   G  P+VVT+N ++D  CK G++DEA 
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
            LL  M  + ++PN  +Y+ +++G C  G +  A E+   M   G   D+V+YN L+NGY
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           CK     +AL ++ EMV  G+ P+VVTY  L   + +   +  A++ F++M+   +  + 
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            TY T IDG  + G + EA  +   +        +  YN  I G C   R+E AL + + 
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 245

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +  + L  DVV+Y+ +I G C  G++D+A  +  +M E  V+P+ + + +LI G   + +
Sbjct: 246 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR 305

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVD 374
            ++  +L  +M +  + PD    + +++
Sbjct: 306 LTEACDLSQEMLDMGLPPDEFTYTTLIN 333



 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 183/354 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYNT+ID  CK G +D+A  L   M  + + P++++YN +I+GLC      EA 
Sbjct: 41  CLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAW 100

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  EM  +G  P  VT+N +++  CK G   +A  +   MV+  V P+  TY+ L++  
Sbjct: 101 EILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSM 160

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    +NRA E F  M   G + ++ +Y  LI+G+ +   + EA  +  EM   G  P+V
Sbjct: 161 CKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSV 220

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN    G   + ++E AL + +EM    +A D  +Y+T I G C+ G +  A ++ + 
Sbjct: 221 VTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQE 280

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D   Y+ LI GLC+  RL  A +L + +    L  D  TY  +I+  C +G 
Sbjct: 281 MVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGD 340

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++KA  L  +M      P+ + +  LI+G  +  +  +   LL K+  ++ +P 
Sbjct: 341 LNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPS 394



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 189/363 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN +I G C  G + K    F +M+     P+VVTYN+LI   C     +EA  L
Sbjct: 8   PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +G+QP+++++NVI++ LC+ G M EA  +L+ M  +   P+  TY+TL++G+C 
Sbjct: 68  LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  ++A  +   M   G     V+Y  LIN  CK + +  A+  + +M  +G++P   T
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 187

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G      +  A ++  EM     +    TYN FI G C    + EA+ + + + 
Sbjct: 188 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 247

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+ +Y+ +I G C+ G L+ A ++ + +  + +  D VTY+ +I GLC   ++ 
Sbjct: 248 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 307

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A DL  +M +  + P+   + TLI+ +      +K + L  +M  K  +PDA   S+++
Sbjct: 308 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 367

Query: 374 DLL 376
           + L
Sbjct: 368 NGL 370



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+   V P+V T+N+++   C  G++ +       M +    PN  TY+TL+D +C  G+
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           I+ A  L  SM S G + + +SYN++ING C+   ++EA  +  EM  KG  P  VTYNT
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G  +      AL +  EM R+ V+    TY   I+ +CK   +  A+E F  + I  
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              + + Y  LIDG  + G L  A  +   +        VVTYN  IHG C   +M++A 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +  +M E  +AP+V+ + T+I GF R  +  +  ++  +M EK V PDA   S ++  L
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 115/240 (47%), Gaps = 50/240 (20%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+Y+TII G C++G +D+A  +  +M  + ++PD VTY+SLI GLC      EA  L
Sbjct: 253 PDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDL 312

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG--- 130
             EM+D G+ P   T+  +++  C  G +++A  L D M+ +   P+A TYS L++G   
Sbjct: 313 SQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNK 372

Query: 131 -----------------------------------------------FCLTGKINRAEEL 143
                                                          FC+ G ++ A+ +
Sbjct: 373 QARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRV 432

Query: 144 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 203
           F SM     K  +  YN++I+G+C+   + +A +LY+EM+  G  P  VT  TL   LF+
Sbjct: 433 FESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFK 492



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 15/111 (13%)

Query: 14  PNTVTYNTIID---------------GLCKEGFVDKAKALFLQMKGENINPDVVTYNSLI 58
           P+ VTY+T+I+               G C +G + +A  +F  M   N  P    YN +I
Sbjct: 393 PSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVII 452

Query: 59  HGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
           HG C   +  +A  L+ EM+  G  P  VT   ++  L K G  +E S ++
Sbjct: 453 HGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVI 503


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 115/347 (33%), Positives = 190/347 (54%)

Query: 27  CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           C+ G +DK   L  ++KG+ + PD   YN++I  LC   +  EA++L   M   GV P  
Sbjct: 288 CRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDN 347

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
           V +  ++   CK G +  A +L D M ++ + P+  TY++++ G C +GK+  A E+F  
Sbjct: 348 VVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNE 407

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M   G + D+V+Y  LI+GYCK  E++EA S++ +MV KG+ P VVTY  L  GL +  +
Sbjct: 408 MLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGE 467

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           ++ A +L  EM R  +  +  TYNT ++GLCK G I + V+L   + +     D   Y  
Sbjct: 468 IDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTT 527

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           L+D  CK G +  A EL R +  + L   +VT+N++++G C  G ++    L   M E  
Sbjct: 528 LMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKG 587

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           + PN   F +L+  +   N      E+   M ++ VMPD++  ++++
Sbjct: 588 IMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILI 634



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 197/398 (49%), Gaps = 35/398 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+   YN II  LCK G V +A+ L   M+   + PD V Y ++I G C   + + A +
Sbjct: 309 KPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACK 368

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  + + P +VT+  ++  +CK+GKM EA  + + M+ + + P+  TY+ L+DG+C
Sbjct: 369 LFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYC 428

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A  +   M   G   + V+Y  L +G CKN E++ A  L  EM  KG++P V 
Sbjct: 429 KAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVY 488

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNT+  GL +I  +E  +KL EEM       DT TY T +D  CK G + +A EL R +
Sbjct: 489 TYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIM 548

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLE---------------------------------- 278
              + +  +  +N L++G C SG LE                                  
Sbjct: 549 LNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNM 608

Query: 279 -IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
               E+++++  R ++ D  TYNI+I G C    M +A  L  +M E   +     +  L
Sbjct: 609 RATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDAL 668

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
           I GF +  K  +  +L  +M++  ++ +  I  + VD+
Sbjct: 669 IRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDV 706



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 177/333 (53%), Gaps = 11/333 (3%)

Query: 6   GEIGVVCK-----------PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTY 54
           G +   CK           P+ VTY ++I G+CK G + +A+ +F +M  + + PD VTY
Sbjct: 361 GNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTY 420

Query: 55  NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
            +LI G C A +  EA  +  +M+ +G+ P+VVT+  + D LCKNG++D A+ LL  M +
Sbjct: 421 TALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSR 480

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
           + ++PN +TY+T+++G C  G I +  +L   M+  G   D ++Y  L++ YCK  E+ +
Sbjct: 481 KGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAK 540

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           A  L R M++K ++PT+VT+N L  G      +E   +L E M    +  + +T+N+ + 
Sbjct: 541 AHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMK 600

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
             C    +    E+++ +       D   YN LI G CK+  ++ A  L + +  +    
Sbjct: 601 QYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSV 660

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
              TY+ +I G     +  +A  LF +M ++ +
Sbjct: 661 TAATYDALIRGFYKRKKFVEARKLFEEMRKHGL 693



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 192/361 (53%), Gaps = 2/361 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+GV    NTV+ N ++  LC+ G V +A  L +QM      PDVV+Y  ++ G C   +
Sbjct: 235 ELGVCW--NTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGE 292

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            ++  +L  E+  +G++P    +N I+  LCKNG++ EA +LL  M +  V P+   Y+T
Sbjct: 293 LDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTT 352

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ GFC  G ++ A +LF  M       D V+Y  +I+G CK+ ++ EA  ++ EM+ KG
Sbjct: 353 VISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKG 412

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           ++P  VTY  L  G  +  +++ A  +  +M +  +  +  TY    DGLCKNG I  A 
Sbjct: 413 LEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVAN 472

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           EL   +     + ++  YN +++GLCK G +E  ++L   +       D +TY  ++   
Sbjct: 473 ELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAY 532

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C  G+M KAH+L   M    + P ++ F  L++GF           L+  M EK +MP+A
Sbjct: 533 CKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNA 592

Query: 367 S 367
           +
Sbjct: 593 T 593



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 188/350 (53%), Gaps = 1/350 (0%)

Query: 26  LCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGL-CHANDWNEAKRLFFEMMDQGVQP 84
           L + GFV +A+ LF ++    +   V + N  +  L C+      A ++F E  + GV  
Sbjct: 181 LVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCW 240

Query: 85  SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELF 144
           + V+ N+++  LC+ GK+ EA  LL  M  R   P+  +Y  ++ G+C  G++++  +L 
Sbjct: 241 NTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLV 300

Query: 145 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 204
             ++  G K D+  YN +I   CKN EV EA  L R M   G+ P  V Y T+  G  ++
Sbjct: 301 DELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKL 360

Query: 205 HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
             V  A KLF+EM+R  +  D  TY + I G+CK+G +VEA E+F  + +   E D   Y
Sbjct: 361 GNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTY 420

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
             LIDG CK+G ++ A  +   + ++ L  +VVTY  +  GLC +G++D A++L  +M  
Sbjct: 421 TALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSR 480

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             + PNV  + T+++G  +I    + ++L+ +M      PD    + ++D
Sbjct: 481 KGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMD 530



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 144/248 (58%), Gaps = 14/248 (5%)

Query: 1   MANG---NGEIGVV-----------CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN 46
           +A+G   NGEI V             +PN  TYNTI++GLCK G +++   L  +M    
Sbjct: 458 LADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAG 517

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
             PD +TY +L+   C   +  +A  L   M+++ +QP++VTFNV+M+  C +G +++  
Sbjct: 518 FYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGE 577

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
           RL++ M+++ + PNA T+++LM  +C+   +    E++ +M   G   D  +YNILI G+
Sbjct: 578 RLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGH 637

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           CK + ++EA  L++EMV KG   T  TY+ L  G ++  +   A KLFEEM++  + A+ 
Sbjct: 638 CKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEK 697

Query: 227 STYNTFID 234
             Y+ F+D
Sbjct: 698 DIYDIFVD 705



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 87/188 (46%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VT+N +++G C  G ++  + L   M  + I P+  T+NSL+   C  N+      
Sbjct: 554 QPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTE 613

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++  M D+GV P   T+N+++   CK   M EA  L   MV++     A TY  L+ GF 
Sbjct: 614 IYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFY 673

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K   A +LF  M   G   +   Y+I ++   +    E  L L  E +++      V
Sbjct: 674 KRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFMTELSGTIFV 733

Query: 193 TYNTLFLG 200
            Y   F+G
Sbjct: 734 VYICFFIG 741



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 93/174 (53%), Gaps = 4/174 (2%)

Query: 207 VEHALKLFEEM---QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQA 263
           V  +  LF EM      D  +    ++ +   L +NG+++EA +LF  L      + + +
Sbjct: 149 VSKSFHLFTEMLIYTYKDWGSHPLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDS 208

Query: 264 YNCLIDGL-CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
            N  +  L C    ++IA+++F   P   +  + V+ NI++H LC  G++ +AH+L + M
Sbjct: 209 CNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQM 268

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +    P+V+ +  ++ G+ RI +  KV++L+ ++K K + PD  I + ++ LL
Sbjct: 269 TDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLL 322



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 43/244 (17%)

Query: 171 EVEEALSLYREMV-----SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
           +V ++  L+ EM+       G  P V  ++  F  L E   V  A KLF ++ R  V   
Sbjct: 148 DVSKSFHLFTEMLIYTYKDWGSHPLV--FDLYFQVLVENGFVLEAQKLFHKLLRYGVVVS 205

Query: 226 TSTYNTFIDGLCKN----GYIVEAVELFRTLG----------ILKCELDI----QAYNCL 267
             + N F+  L  N       V+  E F  LG          +L C   +    +A+N L
Sbjct: 206 VDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLL 265

Query: 268 ID------------------GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           +                   G C+ G L+  L+L   L  + L  D   YN +I  LC +
Sbjct: 266 VQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKN 325

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++ +A  L   M +  V P+ +++ T+I GF ++   S   +L  +M+ KK++PD    
Sbjct: 326 GEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTY 385

Query: 370 SMVV 373
           + V+
Sbjct: 386 TSVI 389


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/353 (33%), Positives = 188/353 (53%), Gaps = 3/353 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  +YN ++  LC  G V+ A+ LF +M      PDVVTY  LIHG C   +   A +L 
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLL 317

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M+ +GV+P+   +  ++  LC  G++ +A  +++ MV   V  +   Y+T++ GFC  
Sbjct: 318 DDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNK 377

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +  A   F  M+  G   D V+Y  LING C+  E++EA  + +EM+++ +    VTY
Sbjct: 378 GDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTY 437

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  G  +  ++  A ++   M +  VA +  TY    DGLCK G +  A EL   +  
Sbjct: 438 TVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSN 497

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              EL+   YN LI+GLCK+G L+ A+     +    L  DV TY  +I  LC  G++D+
Sbjct: 498 KGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDR 557

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           AHDL  +M +N + P ++ +  L++GF    +     +LL  M EK + P+A+
Sbjct: 558 AHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNAT 610



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 182/360 (50%), Gaps = 6/360 (1%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           Y T++ G C +G +  A+  F +M+ + +  D VTY +LI+GLC A +  EA+++  EM+
Sbjct: 367 YTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEML 426

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            + +    VT+ V++D  CK GKM EA ++ + MVQR V PN  TY+ L DG C  G + 
Sbjct: 427 ARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQ 486

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A EL   M + G + +  +YN LING CK   +++A+    +M + G+KP V TY TL 
Sbjct: 487 AANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLI 546

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
             L +  +++ A  L +EM  + +     TYN  ++G C +G +    +L   +      
Sbjct: 547 DALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIH 606

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            +   YN L+   C    ++   E+++ +  R +  +  TYNI+I G C    M +A   
Sbjct: 607 PNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYF 666

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE---LLHKMKEKKVMPDASIVSMVVDL 375
             +M E         +  LI     +NK  K +E   L H M+++    +  + +  +D 
Sbjct: 667 HNEMIEKGFRLTASSYSALIR---LLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDF 723



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 180/364 (49%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN   Y +++  LC +G V  A  +   M    +  D   Y +++ G C+  D   A+R
Sbjct: 326 EPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARR 385

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM  +G+    VT+  +++ LC+ G++ EA ++L  M+ R +  +  TY+ L+DG+C
Sbjct: 386 WFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYC 445

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A ++  +M   G   + V+Y  L +G CK  +V+ A  L  EM +KG++    
Sbjct: 446 KRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNAC 505

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  GL +   ++ A++   +M    +  D  TY T ID LCK+G +  A +L + +
Sbjct: 506 TYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEM 565

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +  I  YN L++G C SGR+E   +L   +  + +  +  TYN ++   C    M
Sbjct: 566 LDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNM 625

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
               +++  M    V PN   +  LI G  +     +     ++M EK     AS  S +
Sbjct: 626 KSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSAL 685

Query: 373 VDLL 376
           + LL
Sbjct: 686 IRLL 689



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 165/320 (51%), Gaps = 2/320 (0%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTY T+I+GLC+ G + +A+ +  +M    ++ D VTY  L+ G C      EA ++   
Sbjct: 400 VTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNT 459

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+ +GV P+VVT+  + D LCK G +  A+ LL  M  + +  NA TY++L++G C  G 
Sbjct: 460 MVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGY 519

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +++A      M++ G K D  +Y  LI+  CK+ E++ A  L +EM+  GIKPT+VTYN 
Sbjct: 520 LDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNV 579

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G     +VE   KL E M   ++  + +TYN+ +   C    +    E+++ +    
Sbjct: 580 LMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRN 639

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            E +   YN LI G CK+  ++ A      +  +       +Y+ +I  L    +  +A 
Sbjct: 640 VEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEAR 699

Query: 317 DLFLDMEENA--VAPNVIIF 334
            LF DM +      P+V  F
Sbjct: 700 KLFHDMRKEGFTAEPDVYNF 719



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 136/220 (61%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  TYN++I+GLCK G++D+A      M    + PDV TY +LI  LC + + + A  L 
Sbjct: 503 NACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLL 562

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+D G++P++VT+NV+M+  C +G+++   +LL+ M+++++ PNA TY++LM  +C+ 
Sbjct: 563 QEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIG 622

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
             +    E++  M S   + ++ +YNILI G+CK + ++EA   + EM+ KG + T  +Y
Sbjct: 623 NNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSY 682

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           + L   L +  +   A KLF +M+++   A+   YN +ID
Sbjct: 683 SALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYID 722



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 148/287 (51%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTY  ++DG CK G + +A  +   M    + P+VVTY +L  GLC   D   A  L  E
Sbjct: 435 VTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHE 494

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M ++G++ +  T+N +++ LCK G +D+A R +  M    ++P+ +TY+TL+D  C +G+
Sbjct: 495 MSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGE 554

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           ++RA +L   M   G K   V+YN+L+NG+C +  VE    L   M+ K I P   TYN+
Sbjct: 555 LDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNS 614

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L       + ++   ++++ M   +V  + +TYN  I G CK   + EA      +    
Sbjct: 615 LMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKG 674

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
             L   +Y+ LI  L K  +   A +LF  + +    A+   YN  I
Sbjct: 675 FRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYI 721



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 168/342 (49%), Gaps = 11/342 (3%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
           +  L  +++   I+P     N+++  L      +EA  LF  + D+    +V ++N+++ 
Sbjct: 219 SAPLLRRVRQYGISPSPEACNAVLSRL----PLDEAIELFQGLPDK----NVCSYNILLK 270

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            LC  G++++A +L D M      P+  TY  L+ G+C  G++  A +L   M + G + 
Sbjct: 271 VLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEP 327

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           +   Y  ++   C    V +AL++  +MV   +      Y T+  G      +  A + F
Sbjct: 328 NATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWF 387

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           +EMQR  +A D  TY T I+GLC+ G + EA ++ + +   + ++D   Y  L+DG CK 
Sbjct: 388 DEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKR 447

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G++  A ++  ++ +R +  +VVTY  +  GLC  G +  A++L  +M    +  N   +
Sbjct: 448 GKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTY 507

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +LI+G  +     + +  +  M    + PD    + ++D L
Sbjct: 508 NSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDAL 549



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 84/175 (48%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VTYN +++G C  G V+  K L   M  +NI+P+  TYNSL+   C  N+      
Sbjct: 571 KPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTE 630

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++  M  + V+P+  T+N+++   CK   M EA    + M+++  R  A +YS L+    
Sbjct: 631 IYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLN 690

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
              K   A +LF  M   G   +   YN  I+       +E  L+L  E+V   I
Sbjct: 691 KKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASI 745


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 187/361 (51%), Gaps = 1/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + YN ++  L  +  +  A+  F  M  + + P+V TYN L+  LC      EA  +
Sbjct: 121 PSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   G  P+ VT+N ++   C+ G++D A RL+D+M +  ++PN  T++++++G C 
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A ++F  M   G   D VSYN L+ GYCK     EALS++ EM  KGI P VVT
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           + +L   + +   +E A+ L  EM+   +  +  T+   IDG CK G++ +A+   R + 
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             + +  +  YN LI+G C  GR++ A EL R +  + +  DVVTY+ ++   C +G   
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH 419

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L   M EN V P+ I + +LI       +      L   M    + PD    + ++
Sbjct: 420 SAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLI 479

Query: 374 D 374
           D
Sbjct: 480 D 480



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 199/359 (55%), Gaps = 6/359 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C PN VTYNT++   C+ G VD+A+ L   M+   + P++VT+NS+++G+C A    
Sbjct: 185 GAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRME 244

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A+++F EM+ +G+ P  V++N ++   CK G   EA  +   M ++ + P+  T+++L+
Sbjct: 245 DARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLI 304

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
              C  G + RA  L   M   G + +++++  LI+G+CK   +++AL   REM    I+
Sbjct: 305 HVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQ 364

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P+VV YN L  G   + +++ A +L  EM+   V  D  TY+T +   CKNG    A +L
Sbjct: 365 PSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQL 424

Query: 249 FRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            + +   G+L    D   Y+ LI  LC+  RL  A  LF+++    L  D VTY  +I G
Sbjct: 425 NQQMLENGVLP---DAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDG 481

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            C +G +++A  L  +M +  V P+V+ +  LI+G  +  +  +   LL K+  ++ +P
Sbjct: 482 HCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVP 540



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/357 (34%), Positives = 193/357 (54%), Gaps = 1/357 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VT+N++++G+CK G ++ A+ +F +M  E + PD V+YN+L+ G C     +EA  
Sbjct: 224 KPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALS 283

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM  +G+ P VVTF  ++  +CK G ++ A  L+  M +R ++ N  T++ L+DGFC
Sbjct: 284 VFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFC 343

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A      M     +   V YN LINGYC    ++EA  L REM +KG+KP VV
Sbjct: 344 KKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVV 403

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+T+     +      A +L ++M  + V  D  TY++ I  LC+   + +A  LF+ +
Sbjct: 404 TYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNM 463

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             L  + D   Y  LIDG CK G +E AL L   + +  ++ DVVTY+++I+GL    + 
Sbjct: 464 ISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSART 523

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            +A  L   +      P  I +  L+    R  +   V+ LL     K +M +A  V
Sbjct: 524 KEAQRLLFKLYHEEPVPANIKYDALMR-CCRNAELKSVLALLKGFCMKGLMNEADKV 579



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 196/363 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN ++  LC  G   +A ++   M+G   +P+ VTYN+L+   C A + + A+RL
Sbjct: 155 PNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERL 214

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M + G++P++VTFN +++ +CK G+M++A ++ D MV+  + P+  +Y+TL+ G+C 
Sbjct: 215 VDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCK 274

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A  +F  M   G   D V++  LI+  CK   +E A+ L REM  +G++   +T
Sbjct: 275 VGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEIT 334

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  G  +   ++ AL    EM++  +      YN  I+G C  G + EA EL R + 
Sbjct: 335 FTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREME 394

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+  Y+ ++   CK+G    A +L + +    ++ D +TY+ +I  LC + ++ 
Sbjct: 395 AKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLG 454

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            AH LF +M    + P+ + + +LI G  +     + + L  +M +  V+PD    S+++
Sbjct: 455 DAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLI 514

Query: 374 DLL 376
           + L
Sbjct: 515 NGL 517



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/328 (34%), Positives = 179/328 (54%), Gaps = 1/328 (0%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P V+ YN+++  L  A+    A+R F  M+  GV P+V T+N+++  LC  G   EA  +
Sbjct: 121 PSVLAYNAVLLALSDAS-LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
           L  M      PNA TY+TL+  FC  G+++RAE L   M   G K + V++N ++NG CK
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
              +E+A  ++ EMV +G+ P  V+YNTL  G  ++     AL +F EM R  +  D  T
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           + + I  +CK G +  AV L R +     +++   +  LIDG CK G L+ AL   R + 
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
           +  +   VV YN +I+G C  G+MD+A +L  +ME   V P+V+ + T++  + +     
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH 419

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVDLL 376
              +L  +M E  V+PDA   S ++ +L
Sbjct: 420 SAFQLNQQMLENGVLPDAITYSSLIRVL 447



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 200/415 (48%), Gaps = 56/415 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+YNT++ G CK G   +A ++F +M  + I PDVVT+ SLIH +C A +   A  L
Sbjct: 260 PDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGL 319

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM ++G+Q + +TF  ++D  CK G +D+A   +  M Q  ++P+   Y+ L++G+C+
Sbjct: 320 VREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCM 379

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A EL   ME+ G K D V+Y+ +++ YCKN +   A  L ++M+  G+ P  +T
Sbjct: 380 VGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAIT 439

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           Y++L   L E  ++  A  LF+ M    +  D  TY + IDG CK G +  A+ L   + 
Sbjct: 440 YSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMV 499

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALEL--------------------------- 283
             G+L    D+  Y+ LI+GL KS R + A  L                           
Sbjct: 500 KAGVLP---DVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAE 556

Query: 284 -----------------------FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
                                  ++S+  R    D   Y+++IHG C +G + KA     
Sbjct: 557 LKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHK 616

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
            M +   APN    ++LI G        +  +++ ++     + DA     ++DL
Sbjct: 617 QMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDL 671



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 153/328 (46%), Gaps = 52/328 (15%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V YN +I+G C  G +D+A+ L  +M+ + + PDVVTY++++   C   D + A +
Sbjct: 364 QPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQ 423

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M++ GV P  +T++ ++  LC+  ++ +A  L   M+   ++P+  TY++L+DG C
Sbjct: 424 LNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHC 483

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGY-------------------------- 166
             G + RA  L   M   G   D V+Y++LING                           
Sbjct: 484 KEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANI 543

Query: 167 --------CKNKEVEEALSLYREMVSKGIKPTV----------------VTYNTLFLGLF 202
                   C+N E++  L+L +    KG+                      Y+ L  G  
Sbjct: 544 KYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHC 603

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL-DI 261
               V  AL   ++M +   A ++++  + I GL + G +VEA ++ + L +  C L D 
Sbjct: 604 REGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQL-LNCCSLADA 662

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPR 289
           +A   LID   K G ++  L++   + R
Sbjct: 663 EASKALIDLNLKEGNVDAVLDVLHGMAR 690



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 97/180 (53%), Gaps = 1/180 (0%)

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G  P+V+ YN + L L +   +  A + F+ M  D VA +  TYN  +  LC  G+  EA
Sbjct: 118 GYAPSVLAYNAVLLALSDA-SLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           + + R +    C+ +   YN L+   C++G ++ A  L   +    L  ++VT+N +++G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +C  G+M+ A  +F +M +  +AP+ + + TL+ G+ ++    + + +  +M  K +MPD
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 114/352 (32%), Positives = 187/352 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+   Y TIIDG+CKEG ++ A  +  +M    + P+VV YN+L+ GLC A  W E +
Sbjct: 293 CTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETE 352

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM D+      VTFN+++D  C+NG +D    LL+ M++R   P+  TY+T+++GF
Sbjct: 353 ELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGF 412

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I+ A  L  SM + GCK + +SY I++ G C  +   +A  L  +M+ +G     
Sbjct: 413 CKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNP 472

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +T+NTL   L +   VE A++L ++M  +  + D  +Y+T IDGL K G   EA+EL   
Sbjct: 473 ITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNV 532

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       +   Y+ +   L + GR+   +++F ++    + +D V YN +I  LC  G+
Sbjct: 533 MVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGE 592

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            ++A +    M  +   PN   +  LI G        +  E+L ++  K  +
Sbjct: 593 TERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 184/357 (51%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N +++ +C +G VD+A  L   +      PDVV+YN+++ GLC A  W   + L  EM+ 
Sbjct: 196 NLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR 255

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
               P++VTFN ++  LC+NG  +    +L  MV+    P+   Y+T++DG C  G +  
Sbjct: 256 MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEV 315

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A E+   M S G K + V YN L+ G C  +  EE   L  EM  K      VT+N L  
Sbjct: 316 AHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVD 375

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
              +   V+  ++L E+M       D  TY T I+G CK G I EAV L +++    C+ 
Sbjct: 376 FFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 435

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           +  +Y  ++ GLC + R   A +L   + ++    + +T+N +I+ LC  G +++A +L 
Sbjct: 436 NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 495

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             M  N  +P++I + T+I G  +  K  + +ELL+ M  K + P+  I S +   L
Sbjct: 496 KQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 552



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 189/365 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ V+YN ++ GLC        + L  +M      P++VT+N+LI  LC    +    
Sbjct: 223 CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVH 282

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  +M++ G  P +  +  I+D +CK G ++ A  +L+ M    ++PN   Y+TL+ G 
Sbjct: 283 EVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGL 342

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +    EEL   M    C  DDV++NIL++ +C+N  V+  + L  +M+ +G  P V
Sbjct: 343 CSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDV 402

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY T+  G  +   ++ A+ L + M       +T +Y   + GLC     V+A +L   
Sbjct: 403 ITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQ 462

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C L+   +N LI+ LCK G +E A+EL + +       D+++Y+ +I GL   G+
Sbjct: 463 MIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 522

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D+A +L   M    ++PN II+ ++     R  + +KVI++   +++  +  DA + + 
Sbjct: 523 TDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNA 582

Query: 372 VVDLL 376
           V+  L
Sbjct: 583 VISSL 587



 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 168/365 (46%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P    Y+ I++  C+ G    A  +   +       DV   N +++ +C     +EA 
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEAL 212

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  ++   G +P VV++N ++  LC   +      L++ MV+    PN  T++TL+   
Sbjct: 213 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 272

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G   R  E+   M   GC  D   Y  +I+G CK   +E A  +   M S G+KP V
Sbjct: 273 CRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNV 332

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YNTL  GL    + E   +L  EM   D   D  T+N  +D  C+NG +   +EL   
Sbjct: 333 VCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ 392

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  D+  Y  +I+G CK G ++ A+ L +S+       + ++Y I++ GLC+  +
Sbjct: 393 MLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAER 452

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
              A DL   M +     N I F TLI+   +     + IELL +M      PD    S 
Sbjct: 453 WVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 512

Query: 372 VVDLL 376
           V+D L
Sbjct: 513 VIDGL 517



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 179/373 (47%), Gaps = 12/373 (3%)

Query: 2   ANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGL 61
           A G GE G      +V  +++I  LC  G   +       +        VV YN+++ G 
Sbjct: 50  APGGGEGG------SVRLSSLIRSLCAAG---RTAEAARALSAAGGGAGVVAYNAMVAGY 100

Query: 62  CHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNA 121
           C A     A+RL   +    V P+  T+  ++  LC  G++ +A  +LD M +R   P  
Sbjct: 101 CRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIP 157

Query: 122 FTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 181
             Y  +++  C  G    A  +   + + GC  D  + N+++N  C    V+EAL L R+
Sbjct: 158 PMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRD 217

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           + S G +P VV+YN +  GL    +     +L EEM R     +  T+NT I  LC+NG 
Sbjct: 218 LPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGL 277

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
                E+   +    C  DI+ Y  +IDG+CK G LE+A E+   +P   L  +VV YN 
Sbjct: 278 FERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNT 337

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           ++ GLC+  + ++  +L  +M +     + + F  L+  F +     +VIELL +M E+ 
Sbjct: 338 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERG 397

Query: 362 VMPDASIVSMVVD 374
            MPD    + V++
Sbjct: 398 CMPDVITYTTVIN 410



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 169/361 (46%), Gaps = 15/361 (4%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           YN ++ G C+ G ++ A+ L   +    + P+  TY  ++  LC      +A  +  EM 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            +G  P    ++VI++  C+ G    A R+L+ +  R    +    + +++  C  G ++
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A  L   + S GC+ D VSYN ++ G C  K       L  EMV     P +VT+NTL 
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 199 L-----GLFE-IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
                 GLFE +H+V        +M       D   Y T IDG+CK G++  A E+   +
Sbjct: 270 SYLCRNGLFERVHEV------LAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRM 323

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + ++  YN L+ GLC + R E   EL   +  +    D VT+NI++   C +G +
Sbjct: 324 PSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLV 383

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+  +L   M E    P+VI + T+I+GF +     + + LL  M      P+    ++V
Sbjct: 384 DRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIV 443

Query: 373 V 373
           +
Sbjct: 444 L 444



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 160/352 (45%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
            V   PN  TY  ++  LC  G +  A A+  +M      P    Y+ ++   C    + 
Sbjct: 115 AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFR 174

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A R+  ++  +G    V   N++++ +C  G +DEA  LL  +      P+  +Y+ ++
Sbjct: 175 SAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVL 234

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C+  +    +EL   M  M C  + V++N LI+  C+N   E    +  +MV  G  
Sbjct: 235 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCT 294

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P +  Y T+  G+ +   +E A ++   M    +  +   YNT + GLC      E  EL
Sbjct: 295 PDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 354

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +    C LD   +N L+D  C++G ++  +EL   +  R  + DV+TY  +I+G C 
Sbjct: 355 LAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCK 414

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +G +D+A  L   M      PN I +  ++ G     +     +L+ +M ++
Sbjct: 415 EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQ 466


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/351 (34%), Positives = 189/351 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VT N +I+  C  G +  + ++  ++      PD +T N+L+ GLC   +   +  
Sbjct: 97  EPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLH 156

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +++ QG Q + V++  +++ LCK G+   A +LL ++  R  RP+   YST++DG C
Sbjct: 157 FHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLC 216

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +N+A + F  M + G   + ++Y+ LI G+C   ++  A SL  EM+ K I P V 
Sbjct: 217 KDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVY 276

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L   L +  +V+ A KL  EM      AD  TYN+ +DGLCK+  + +A  LF  +
Sbjct: 277 TYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKM 336

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + +   Y  LIDGLCK GRL+ A +LF+ L  +    DV TYN+MI GLC +G  
Sbjct: 337 KKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMF 396

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           DKA  +   ME+N   PN + F  +I      ++  K  +LLH M  K ++
Sbjct: 397 DKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGLL 447



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 161/315 (51%)

Query: 29  EGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVT 88
           E  VD   + F ++      P ++ +  ++  L     +  A  L  +M  +G++P++VT
Sbjct: 43  ENVVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVT 102

Query: 89  FNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSME 148
            N++++  C  G+M  +  +L  +++   +P+  T +TLM G CL G++ R+      + 
Sbjct: 103 LNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVV 162

Query: 149 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 208
           + G + + VSY  L+NG CK  E   A+ L R +  +  +P VV Y+T+  GL +   V 
Sbjct: 163 AQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVN 222

Query: 209 HALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLI 268
            A   F EM    +  +  TY+T I G C  G ++ A  L   + +     ++  YN LI
Sbjct: 223 QAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILI 282

Query: 269 DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVA 328
           D LCK G+++ A +L   +  +   ADVVTYN ++ GLC    +DKA  LF+ M++  + 
Sbjct: 283 DALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQ 342

Query: 329 PNVIIFVTLIHGFVR 343
           PN   +  LI G  +
Sbjct: 343 PNKYTYTALIDGLCK 357



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 144/291 (49%)

Query: 84  PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEEL 143
           P ++ F  I+  L K      A  L   M  + + PN  T + L++ FC  G++  +  +
Sbjct: 63  PPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSV 122

Query: 144 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 203
            G +  +G + D ++ N L+ G C   EV+ +L  + ++V++G +   V+Y TL  GL +
Sbjct: 123 LGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 182

Query: 204 IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQA 263
           I +   A+KL   ++      D   Y+T IDGLCK+  + +A + F  +       ++  
Sbjct: 183 IGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVIT 242

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
           Y+ LI G C +G+L  A  L   +  + +  +V TYNI+I  LC +G++ +A  L  +M 
Sbjct: 243 YSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMH 302

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
                 +V+ + +++ G  +     K   L  KMK+  + P+    + ++D
Sbjct: 303 HKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALID 353



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 111/215 (51%), Gaps = 1/215 (0%)

Query: 163 INGY-CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           I GY  K K    A+SL R+M  KGI+P +VT N L      + Q+  +  +  ++ +  
Sbjct: 71  ILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLG 130

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              DT T NT + GLC  G +  ++     +     +++  +Y  L++GLCK G    A+
Sbjct: 131 YQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAV 190

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           +L R +  R    DVV Y+ +I GLC D  +++A+D F +M    + PNVI + TLI GF
Sbjct: 191 KLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGF 250

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               +      LL++M  K + P+    ++++D L
Sbjct: 251 CLAGQLMGAFSLLNEMILKNINPNVYTYNILIDAL 285



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 43/71 (60%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +  TYN +I GLCKEG  DKA A+  +M+     P+ VT++ +I  L   ++ ++A+
Sbjct: 376 CCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAE 435

Query: 72  RLFFEMMDQGV 82
           +L   M+ +G+
Sbjct: 436 KLLHGMIAKGL 446


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 193/376 (51%), Gaps = 2/376 (0%)

Query: 3   NGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGL 61
           NG    G + +P+ +TYNT+IDGLCK G  ++   L  +M+ +    P+ VTYN LI G 
Sbjct: 367 NGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGY 426

Query: 62  CHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNA 121
           C A+    A+ LF +M   GV P+VVT N ++D +CK+G+++ A    + M  + ++ NA
Sbjct: 427 CKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNA 486

Query: 122 FTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 181
            TY+ L+  FC    I +A ELF  M   GC  D + Y  LI+G  +  +++ A  +  +
Sbjct: 487 VTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSK 546

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M   G  P +V++N L  G    ++++ A ++ +EM+   +  D  TYNT I    K G 
Sbjct: 547 MKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGD 606

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA-DVVTYN 300
              A  L + +        +  Y  LI   C +G L+ A+++FR +     V  + V YN
Sbjct: 607 FSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYN 666

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           I+I+ LC   Q+D A  L  DM+   V PN   F  +  G    N  SK  EL+ +M E 
Sbjct: 667 ILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEH 726

Query: 361 KVMPDASIVSMVVDLL 376
              PD   + ++ + L
Sbjct: 727 ACNPDYITMEILTEWL 742



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 112/340 (32%), Positives = 182/340 (53%), Gaps = 1/340 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNTVTYN +IDG CK   ++ A+ LF QM  + + P+VVT N+L+ G+C     N A 
Sbjct: 412 CMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAV 471

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             F EM  +G++ + VT+  ++   C    +++A  L D M++    P+A  Y TL+ G 
Sbjct: 472 EFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGL 531

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GK++RA  +   M+  G   D VS+N+LING+C+  +++EA  + +EM + GIKP  
Sbjct: 532 SQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDG 591

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL     +      A +L ++M ++ +     TY   I   C NG + EA+++FR 
Sbjct: 592 VTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRD 651

Query: 252 L-GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
           +    K   +   YN LI+ LC+  ++++AL L   +  + +  +  T+N M  GL    
Sbjct: 652 MSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKN 711

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
            + KA +L   M E+A  P+ I    L      + + +K+
Sbjct: 712 WLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKL 751



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 193/373 (51%), Gaps = 19/373 (5%)

Query: 8   IGVVCK-------PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           +G+V K       PN++    +I  LC+ G  D+A  +   +       +  + N+L+  
Sbjct: 255 VGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTA 314

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD---- 116
           L  A ++     L  EM +  +QP+VVTF ++++ LCK  ++DEA  + + M   +    
Sbjct: 315 LGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGF 374

Query: 117 -VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG----CKHDDVSYNILINGYCKNKE 171
            V P+  TY+TL+DG C   K+ R EE  G +E M     C  + V+YN LI+GYCK   
Sbjct: 375 LVEPDVITYNTLIDGLC---KVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASM 431

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           +E A  L+ +M   G+ P VVT NTL  G+ +  ++  A++ F EMQ   +  +  TY  
Sbjct: 432 IEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTA 491

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            I   C    I +A+ELF  +    C  D   Y  LI GL ++G+L+ A  +   +    
Sbjct: 492 LIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAG 551

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
              D+V++N++I+G C   ++D+A+++  +ME   + P+ + + TLI  F +    S   
Sbjct: 552 FSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAH 611

Query: 352 ELLHKMKEKKVMP 364
            L+ KM ++ ++P
Sbjct: 612 RLMKKMVKEGLVP 624



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 186/391 (47%), Gaps = 44/391 (11%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N ++  L +     +   L  +MK  +I P+VVT+  LI+ LC     +EA  +F E M+
Sbjct: 309 NALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVF-EKMN 367

Query: 80  QG------VQPSVVTFNVIMDELCKNGKMDEASRLLDLM-VQRDVRPNAFTYSTLMDGFC 132
            G      V+P V+T+N ++D LCK G+ +E   L++ M  Q    PN  TY+ L+DG+C
Sbjct: 368 GGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYC 427

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               I  A ELF  M   G   + V+ N L++G CK+  +  A+  + EM  KG+K   V
Sbjct: 428 KASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAV 487

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L      ++ +E A++LF+EM     + D   Y T I GL + G +  A  +   +
Sbjct: 488 TYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKM 547

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALE------------------------------ 282
                  DI ++N LI+G C+  +L+ A E                              
Sbjct: 548 KEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDF 607

Query: 283 -----LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA-VAPNVIIFVT 336
                L + + +  LV  VVTY  +IH  C +G +D+A  +F DM   + V PN +I+  
Sbjct: 608 STAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNI 667

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           LI+   R N+    + L+  MK K V P+ +
Sbjct: 668 LINSLCRKNQVDLALSLMDDMKVKGVKPNTN 698



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 161/316 (50%), Gaps = 1/316 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VT NT++DG+CK G ++ A   F +M+G+ +  + VTY +LI   C+ N+  +A  L
Sbjct: 449 PNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMEL 508

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM++ G  P  + +  ++  L + GK+D AS +L  M +    P+  +++ L++GFC 
Sbjct: 509 FDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCR 568

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K++ A E+   ME+ G K D V+YN LI+ + K  +   A  L ++MV +G+ PTVVT
Sbjct: 569 KNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVT 628

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQR-DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           Y  L         ++ A+K+F +M     V  +T  YN  I+ LC+   +  A+ L   +
Sbjct: 629 YGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDM 688

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +   + +   +N +  GL +   L  A EL   +       D +T  I+   L   G+ 
Sbjct: 689 KVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGET 748

Query: 313 DKAHDLFLDMEENAVA 328
            K        E +A A
Sbjct: 749 AKLKSFVQGYEVSASA 764



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 12/365 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAK------ALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           PN+ T + +   L K   V +A        L  +     + P+ +    LI  LC +   
Sbjct: 227 PNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRT 286

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           + A  +   +M  G      + N ++  L +  +    + LL  M + D++PN  T+  L
Sbjct: 287 DRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGIL 346

Query: 128 MDGFCLTGKINRAEELFGSM---ESMG--CKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           ++  C   +++ A E+F  M   ES G   + D ++YN LI+G CK    EE L L   M
Sbjct: 347 INHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERM 406

Query: 183 VSKG-IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
            S+    P  VTYN L  G  +   +E A +LF++M +D V  +  T NT +DG+CK+G 
Sbjct: 407 RSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGR 466

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           I  AVE F  +     + +   Y  LI   C    +E A+ELF  +       D + Y  
Sbjct: 467 INGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYT 526

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +I GL   G++D+A  +   M+E   +P+++ F  LI+GF R NK  +  E+L +M+   
Sbjct: 527 LISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAG 586

Query: 362 VMPDA 366
           + PD 
Sbjct: 587 IKPDG 591



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 189/379 (49%), Gaps = 18/379 (4%)

Query: 11  VCKPNTVTY--NTIIDGLCKEGFVDKAKALF---LQMKGE---NINPDVVTYNSLIH--G 60
           +C    +T+  N +ID L ++G VD A  L    LQ K E   N N   + +++L     
Sbjct: 185 LCPSRRLTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDK 244

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           +  A D  E   L  +  +  V P+ +    ++  LC++G+ D A  +L  +++      
Sbjct: 245 VGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVME 304

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
           A + + L+       +  R   L   M+ M  + + V++ ILIN  CK + V+EAL ++ 
Sbjct: 305 AASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFE 364

Query: 181 EM---VSKG--IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ-RDDVAADTSTYNTFID 234
           +M    S G  ++P V+TYNTL  GL ++ + E  L L E M+ +     +T TYN  ID
Sbjct: 365 KMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLID 424

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
           G CK   I  A ELF  +       ++   N L+DG+CK GR+  A+E F  +  + L  
Sbjct: 425 GYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKG 484

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           + VTY  +I   CN   ++KA +LF +M E   +P+ I++ TLI G  +  K  +   +L
Sbjct: 485 NAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVL 544

Query: 355 HKMKEKKVMPDASIVSMVV 373
            KMKE    PD  IVS  V
Sbjct: 545 SKMKEAGFSPD--IVSFNV 561


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 195/362 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY  +ID LC  G +DKAK L+++M+  + +PD VTY +L+       D    K
Sbjct: 301 CGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVK 360

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R + EM   G  P VVT+ ++++ LCK+G +D A  +LD+M  + + PN  TY+T++ G 
Sbjct: 361 RFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGL 420

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +++ A EL  +MES+G K    SY + I+ Y K+ +  +A+  +  M  +GI P++
Sbjct: 421 LKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSI 480

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
              N     L E  ++  A  +F ++ +  ++ D+ TYN  +    K G I +A +L   
Sbjct: 481 AACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSE 540

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    CE D+   N LI+ L K+GR++ A ++F  L    L   VVTYNI++ GL  +G+
Sbjct: 541 MISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGK 600

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + KA +LF  M E+   PN I F +L+    + +     +++  +M      PD    + 
Sbjct: 601 ILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNT 660

Query: 372 VV 373
           ++
Sbjct: 661 II 662



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 179/352 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY+ ++  L + G   K   L  +MK   + P++ TY   I  L  A   ++A  
Sbjct: 232 KPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWG 291

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM D+G  P V+T+ V++D LC  GK+D+A  L   M      P+  TY TLMD F 
Sbjct: 292 IFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFG 351

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +   +  +  ME  G   D V+Y ILI   CK+ +V+ A  +   M +KGI P + 
Sbjct: 352 KVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLH 411

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNT+  GL +  +++ AL+L E M+   V     +Y  FID   K+G   +A++ F T+
Sbjct: 412 TYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETM 471

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   I A N  +  L ++GR+  A ++F  L +  L  D VTYN+++      GQ+
Sbjct: 472 KKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQI 531

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           DKA  L  +M      P+V+I  +LI+   +  +     ++  ++K  K+ P
Sbjct: 532 DKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAP 583



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 175/330 (53%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P   +YN ++DGL    F +KA  LF  MK    +P+  TYN L+     +   N+   L
Sbjct: 794  PTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDL 853

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            + EM  +G +P+ +T N+I+  L K+  +++A  L   ++  D  P   TY  L+DG   
Sbjct: 854  YSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLK 913

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             G+  +A ++F  M   GC  + V YNILING+ K+ E++ A  L+++MV +GI+P + +
Sbjct: 914  AGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKS 973

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            Y  L   L    +++ A++ FEE++   +  DT +YN  I+GL K+  + EA+ LF  + 
Sbjct: 974  YTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMK 1033

Query: 254  ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  D+  YN LI  L  +G++++A++++  L    L   V TYN +I G    G  D
Sbjct: 1034 NRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKD 1093

Query: 314  KAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            +A  +F  M     +PN   F  L + + R
Sbjct: 1094 QAFSVFKKMMVVGCSPNTETFAQLPNKYPR 1123



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 192/391 (49%), Gaps = 38/391 (9%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            C P+ +TYNTII GL +EG +D A   F QMK + ++PD VT  +LI G+       +A 
Sbjct: 651  CNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGRVEDAI 709

Query: 72   RLFFEMMDQGVQPSVVTF---------------------------NVIMDE--------- 95
            ++  E + Q    +   F                           +V  D+         
Sbjct: 710  KVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKV 769

Query: 96   LCKNGKMDEASRLLDLMVQR-DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            LCK  K  +A  + D   +   + P   +Y+ LMDG   +    +A ELF  M+S G   
Sbjct: 770  LCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHP 829

Query: 155  DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
            ++ +YN+L++ + K+K + +   LY EM S+G +P  +T+N +   L + + +  AL L+
Sbjct: 830  NNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLY 889

Query: 215  EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
             E+   D +    TY   IDGL K G   +A+++F  +    C  +   YN LI+G  KS
Sbjct: 890  YELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKS 949

Query: 275  GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            G ++ A ELF+ + +  +  D+ +Y I++  LC  G++D+A   F +++   + P+ + +
Sbjct: 950  GEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSY 1009

Query: 335  VTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
              +I+G  +  +  + + L  +MK + + PD
Sbjct: 1010 NFIINGLGKSRRLDEALSLFSEMKNRGISPD 1040



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 89/264 (33%), Positives = 154/264 (58%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            C+PN +T+N II  L K   ++KA  L+ ++   + +P   TY  LI GL  A    +A 
Sbjct: 862  CEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAM 921

Query: 72   RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            ++F EM+D G  P+ V +N++++   K+G++D A  L   MV+  +RP+  +Y+ L++  
Sbjct: 922  KIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECL 981

Query: 132  CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            C+TG+I+ A + F  ++  G   D VSYN +ING  K++ ++EALSL+ EM ++GI P +
Sbjct: 982  CITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDL 1041

Query: 192  VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             TYN L L L    +V+ A+K++EE+Q   +     TYN  I G   +G   +A  +F+ 
Sbjct: 1042 YTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKK 1101

Query: 252  LGILKCELDIQAYNCLIDGLCKSG 275
            + ++ C  + + +  L +   ++G
Sbjct: 1102 MMVVGCSPNTETFAQLPNKYPRAG 1125



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 156/283 (55%), Gaps = 1/283 (0%)

Query: 57   LIHGLCHANDWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
            LI  LC      +A+ +F +     G+ P++ ++N +MD L  +   ++A  L + M   
Sbjct: 766  LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825

Query: 116  DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
               PN FTY+ L+D    + +IN+  +L+  M S GC+ + +++NI+I+   K+  + +A
Sbjct: 826  GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA 885

Query: 176  LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
            L LY E++S    PT  TY  L  GL +  + E A+K+FEEM       ++  YN  I+G
Sbjct: 886  LDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILING 945

Query: 236  LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
              K+G I  A ELF+ +       D+++Y  L++ LC +GR++ A++ F  L    L  D
Sbjct: 946  FGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPD 1005

Query: 296  VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
             V+YN +I+GL    ++D+A  LF +M+   ++P++  +  LI
Sbjct: 1006 TVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALI 1048



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 185/370 (50%), Gaps = 3/370 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+G +   N  +YN +I  L   GF ++A  ++ +M  E + P + TY++L+  L    D
Sbjct: 194 EVGFIL--NAYSYNGLIH-LLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGD 250

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +   L  EM   G++P++ T+ + +  L +  ++D+A  +   M      P+  TY+ 
Sbjct: 251 TRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTV 310

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+D  C  GK+++A+EL+  M +     D V+Y  L++ + K  ++E     + EM   G
Sbjct: 311 LIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDG 370

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
             P VVTY  L   L +   V+ A  + + M    +  +  TYNT I GL K   + EA+
Sbjct: 371 YAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEAL 430

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           EL   +  L  +    +Y   ID   KSG    A++ F ++ +R ++  +   N  ++ L
Sbjct: 431 ELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTL 490

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              G++ +A D+F D+ +  ++P+ + +  L+  + +  +  K  +LL +M  K   PD 
Sbjct: 491 AETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDV 550

Query: 367 SIVSMVVDLL 376
            I++ +++ L
Sbjct: 551 MIINSLINTL 560



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 188/370 (50%), Gaps = 9/370 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNT+T+N+++D L K   VD A  +F +M   N NPDV+TYN++I+GL      + A 
Sbjct: 616 CPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYA- 674

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL-LDLMVQRDVRPNAFTYSTLMDG 130
             FF  M + + P  VT   ++  + ++G++++A ++ ++ + Q  ++ N+  +  LM+ 
Sbjct: 675 FWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMEC 734

Query: 131 FCLTGKINRAEELFGSMESMGCK---HDDVSYNILINGYCKNKEVEEALSLYREMVSK-G 186
                +I   EE     E + C     DD     LI   CK K+  +A +++ +     G
Sbjct: 735 ILTEAEI---EEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLG 791

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I PT+ +YN L  GL   +  E AL+LFE+M+      +  TYN  +D   K+  I +  
Sbjct: 792 IHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLY 851

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +L+  +    CE +   +N +I  L KS  L  AL+L+  L          TY  +I GL
Sbjct: 852 DLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGL 911

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              G+ ++A  +F +M +    PN +I+  LI+GF +  +     EL  KM ++ + PD 
Sbjct: 912 LKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDL 971

Query: 367 SIVSMVVDLL 376
              +++V+ L
Sbjct: 972 KSYTILVECL 981



 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 172/337 (51%), Gaps = 1/337 (0%)

Query: 22   IIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQ 80
            +I  LCK      A+ +F +  K   I+P + +YN L+ GL  +N   +A  LF +M   
Sbjct: 766  LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825

Query: 81   GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
            G  P+  T+N+++D   K+ ++++   L   M  R   PNA T++ ++     +  +N+A
Sbjct: 826  GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA 885

Query: 141  EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
             +L+  + S        +Y  LI+G  K    E+A+ ++ EM+  G  P  V YN L  G
Sbjct: 886  LDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILING 945

Query: 201  LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
              +  +++ A +LF++M ++ +  D  +Y   ++ LC  G I EAV+ F  L +   + D
Sbjct: 946  FGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPD 1005

Query: 261  IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
              +YN +I+GL KS RL+ AL LF  +  R +  D+ TYN +I  L   G++D A  ++ 
Sbjct: 1006 TVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYE 1065

Query: 321  DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            +++   + P+V  +  LI G        +   +  KM
Sbjct: 1066 ELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKM 1102



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 178/374 (47%), Gaps = 17/374 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ +  N++I+ L K G VD A  +F ++K   + P VVTYN L+ GL       +A 
Sbjct: 546 CEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKAL 605

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M + G  P+ +TFN ++D L KN  +D A ++   M   +  P+  TY+T++ G 
Sbjct: 606 ELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGL 665

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+I+ A   F  M+      D V+   LI G  ++  VE+A+ +  E V +    T 
Sbjct: 666 IREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQT- 723

Query: 192 VTYNTLFLG-----LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
              N+ F G     +    ++E A+   E +  + V  D       I  LCK    ++A 
Sbjct: 724 ---NSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQ 780

Query: 247 ELF----RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            +F    + LGI      +++YNCL+DGL  S   E ALELF  +       +  TYN++
Sbjct: 781 NVFDKFTKNLGI---HPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLL 837

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           +       +++K +DL+ +M      PN I    +I   V+ N  +K ++L +++     
Sbjct: 838 LDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDF 897

Query: 363 MPDASIVSMVVDLL 376
            P       ++D L
Sbjct: 898 SPTPCTYGPLIDGL 911



 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 176/399 (44%), Gaps = 38/399 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP   +Y   ID   K G   KA   F  MK   I P +   N+ ++ L      +EA+ 
Sbjct: 442 KPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAED 501

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F ++   G+ P  VT+N++M    K G++D+A++LL  M+ +   P+    ++L++   
Sbjct: 502 IFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLY 561

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ A ++FG ++++      V+YNIL+ G  K  ++ +AL L+  M   G  P  +
Sbjct: 562 KAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTI 621

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N+L   L +   V+ ALK+F  M   +   D  TYNT I GL + G I  A   F  +
Sbjct: 622 TFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM 681

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIAL--------------------ELFRSLPRRVL 292
                  D      LI G+ + GR+E A+                    EL   +     
Sbjct: 682 KKF-LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAE 740

Query: 293 VADVVTYN----------------IMIHGLCNDGQMDKAHDLFLDMEEN-AVAPNVIIFV 335
           + + +++                  +I  LC   +   A ++F    +N  + P +  + 
Sbjct: 741 IEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYN 800

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            L+ G +  N   K +EL   MK     P+    ++++D
Sbjct: 801 CLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLD 839



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 147/324 (45%), Gaps = 44/324 (13%)

Query: 90  NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
           N +++ L +  ++++   + DLM ++ +  N  TY T+     + G I RA      M  
Sbjct: 135 NYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTE 194

Query: 150 MGCKHDDVSYN----ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 205
           +G   +  SYN    +L+ G+C      EAL +Y+ M+S+G+KP++ TY+ L + L    
Sbjct: 195 VGFILNAYSYNGLIHLLLPGFC-----NEALKVYKRMISEGMKPSMKTYSALMVALGRRG 249

Query: 206 QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYN 265
                + L EEM+   +  +  TY   I  L +   I +A  +F+ +    C  D+  Y 
Sbjct: 250 DTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYT 309

Query: 266 CLIDGLCKSGRLEIALELFRSL------PRRV---------------------------- 291
            LID LC +G+L+ A EL+  +      P RV                            
Sbjct: 310 VLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVD 369

Query: 292 -LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
               DVVTY I+I  LC  G +D+A D+   M    + PN+  + T+I G ++  +  + 
Sbjct: 370 GYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEA 429

Query: 351 IELLHKMKEKKVMPDASIVSMVVD 374
           +ELL  M+   V P A    + +D
Sbjct: 430 LELLENMESLGVKPTAFSYVLFID 453



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 123/258 (47%), Gaps = 24/258 (9%)

Query: 5    NGEIGVVC-----------KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVT 53
            +GEI   C           +P+  +Y  +++ LC  G +D+A   F ++K   ++PD V+
Sbjct: 949  SGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVS 1008

Query: 54   YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
            YN +I+GL  +   +EA  LF EM ++G+ P + T+N ++  L   GK+D A ++ + + 
Sbjct: 1009 YNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQ 1068

Query: 114  QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
               + P+ FTY+ L+ G  L+G  ++A  +F  M  +GC  +  ++  L N Y +   V 
Sbjct: 1069 LVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVH 1128

Query: 174  E---ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH----------ALKLFEEMQRD 220
                A+ +    +   I+     Y   FL L  I+   H          AL + EEM+R 
Sbjct: 1129 NPFGAVFIGLFFIFTSIRLNQFYYIFRFLFLVFINPCHHLLADVPKGYLALYVGEEMKRF 1188

Query: 221  DVAADTSTYNTFIDGLCK 238
             +        +F D L K
Sbjct: 1189 VIPMPYLNQASFQDLLSK 1206



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/243 (19%), Positives = 106/243 (43%), Gaps = 34/243 (13%)

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL----------FEIHQV---------- 207
           + + +E+ + ++  M  K I   + TY T+F  L          F + ++          
Sbjct: 143 EQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAY 202

Query: 208 --------------EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
                           ALK+++ M  + +     TY+  +  L + G   + + L   + 
Sbjct: 203 SYNGLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMK 262

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +    +I  Y   I  L ++ R++ A  +F+ +       DV+TY ++I  LC  G++D
Sbjct: 263 SIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLD 322

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA +L++ M  ++ +P+ + ++TL+  F ++     V    ++M+     PD    ++++
Sbjct: 323 KAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILI 382

Query: 374 DLL 376
           + L
Sbjct: 383 EAL 385


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 115/328 (35%), Positives = 183/328 (55%), Gaps = 9/328 (2%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N ++  L K     + + ++ +M    I P++ T+N  I+GLC A   N+A+ +  ++  
Sbjct: 169 NPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKA 228

Query: 80  QGVQPSVVTFNVIMDELCKN---GKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
            G  P++VT+N ++D  CK    GKM  A  +L  M+   + PN  T++TL+DGFC    
Sbjct: 229 WGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDEN 288

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +  A+  F  M+  G K + V+YN LING   N +++EA++L+ +MV  G+KP +VT+N 
Sbjct: 289 VLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNA 348

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---G 253
           L  G  +   ++ A KLF+++   D+  +  T+NT ID  CK G + E   L  ++   G
Sbjct: 349 LINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEG 408

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           I     ++  YNCLI GLC++  +  A +L   +    L ADVVTYNI+I G C DG+  
Sbjct: 409 IFP---NVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPS 465

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           KA  L  +M    V PN + + TL+ G+
Sbjct: 466 KAEKLLGEMLNVGVKPNHVTYNTLMDGY 493



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 192/363 (52%), Gaps = 3/363 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH---ANDWNE 69
           +PN  T+N  I+GLCK G ++KA+ +   +K    +P++VTYN+LI G C    A     
Sbjct: 197 QPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYR 256

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +  EM+   + P+ +TFN ++D  CK+  +  A    + M ++ ++PN  TY++L++
Sbjct: 257 ADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLIN 316

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G    GK++ A  L+  M  +G K + V++N LING+CK K ++EA  L+ ++  + + P
Sbjct: 317 GLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVP 376

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             +T+NT+     +   +E    L   M  + +  + STYN  I GLC+N  +  A +L 
Sbjct: 377 NAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLL 436

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +   + + D+  YN LI G CK G    A +L   +    +  + VTYN ++ G C +
Sbjct: 437 NEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCME 496

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G +  A  +   ME+     NV+ +  LI GF +  K      LL++M EK + P+ +  
Sbjct: 497 GNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY 556

Query: 370 SMV 372
            +V
Sbjct: 557 DVV 559



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 166/309 (53%), Gaps = 3/309 (0%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           + A  +F  + D G + S+ + N ++  L K  +  E   +   M++R ++PN  T++  
Sbjct: 147 HSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIF 206

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK---EVEEALSLYREMVS 184
           ++G C  GK+N+AE++   +++ G   + V+YN LI+G+CK     ++  A ++ +EM++
Sbjct: 207 INGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLA 266

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
             I P  +T+NTL  G  +   V  A   FEEMQR  +  +  TYN+ I+GL  NG + E
Sbjct: 267 NKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDE 326

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A+ L+  +  L  + +I  +N LI+G CK   ++ A +LF  +  + LV + +T+N MI 
Sbjct: 327 AIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMID 386

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
             C  G M++   L   M +  + PNV  +  LI G  R        +LL++M+  ++  
Sbjct: 387 AFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKA 446

Query: 365 DASIVSMVV 373
           D    ++++
Sbjct: 447 DVVTYNILI 455



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 77/190 (40%), Positives = 118/190 (62%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +T+NT+ID  CK G +++  AL   M  E I P+V TYN LI GLC   +   AK+L
Sbjct: 376 PNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKL 435

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM +  ++  VVT+N+++   CK+G+  +A +LL  M+   V+PN  TY+TLMDG+C+
Sbjct: 436 LNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCM 495

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A ++   ME  G + + V+YN+LI G+CK  ++E+A  L  EM+ KG+ P   T
Sbjct: 496 EGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTT 555

Query: 194 YNTLFLGLFE 203
           Y+ + L + E
Sbjct: 556 YDVVRLEMLE 565



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 139/235 (59%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G+  KPN VT+N +I+G CK+  + +A+ LF  +  +++ P+ +T+N++I   C A   
Sbjct: 335 VGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMM 394

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            E   L   M+D+G+ P+V T+N ++  LC+N  +  A +LL+ M   +++ +  TY+ L
Sbjct: 395 EEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNIL 454

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G+C  G+ ++AE+L G M ++G K + V+YN L++GYC    ++ AL +  +M  +G 
Sbjct: 455 IGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGK 514

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
           +  VVTYN L  G  +  ++E A +L  EM    +  + +TY+     + + G+I
Sbjct: 515 RANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFI 569



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 151/292 (51%), Gaps = 14/292 (4%)

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRP--NAFTYSTLMDGFCLTGKINRAEELFGSMES 149
            +D+L KN K   +S    L++  D RP  NA     L+  +    +I+ A E+F  ++ 
Sbjct: 100 FLDKLVKNEKHTVSSVFHSLLLGGD-RPCANALITDMLVLAYVTNLEIHSACEVFRRVQD 158

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
            G K    S N L++   K  E  E   +Y+EM+ + I+P + T+N    GL +  ++  
Sbjct: 159 YGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNK 218

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK-------CELDIQ 262
           A  + E+++    + +  TYNT IDG CK G    A +++R   ILK       C  +I 
Sbjct: 219 AEDVIEDIKAWGFSPNIVTYNTLIDGHCKKG---SAGKMYRADAILKEMLANKICPNEI- 274

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
            +N LIDG CK   +  A   F  + R+ L  ++VTYN +I+GL N+G++D+A  L+  M
Sbjct: 275 TFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKM 334

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
               + PN++ F  LI+GF +     +  +L   + E+ ++P+A   + ++D
Sbjct: 335 VGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMID 386


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/338 (36%), Positives = 186/338 (55%), Gaps = 1/338 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VT N++IDGLCK   +DKA+A+  QM  E+I P+  TYNSLIHG   +  W EA R+
Sbjct: 285 PNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRI 344

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G +P+VVT+++++D LCK+G   EA  + + M+Q   +PNA TY +L+ G+  
Sbjct: 345 LKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYAT 404

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +     +   M   G +     +NI I  YCK   ++EA   + +M  +G  P +V 
Sbjct: 405 EGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVA 464

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y T+  GL +I +++ A+  F +M  D ++ D  T+NT I G   +G   +A ELF  + 
Sbjct: 465 YTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMM 524

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 ++  +N +ID L K G++  A +LF  +PR     +VV+YN MIHG    G++ 
Sbjct: 525 DRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVG 584

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN-KPSKV 350
           +   L  DM    + P  + F TL+ G V +  KP  V
Sbjct: 585 EVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVV 622



 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 189/369 (51%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
            E G  C PN V+Y T+I G  KEG V KA  LF +M    I P+VVT NS+I GLC   
Sbjct: 242 AEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQ 301

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             ++A+ +  +M+D+ + P+  T+N ++     +G+  EA R+L  M +   RPN  TYS
Sbjct: 302 AMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYS 361

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+D  C +G    A E+F SM   G K +  +Y  L++GY     + +  ++   MV  
Sbjct: 362 MLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQN 421

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G++P    +N       +  +++ A   F +MQ+     D   Y T IDGLCK G + +A
Sbjct: 422 GMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDA 481

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           +  F  +       DI  +N LI G    G+ E A ELF  +  R +  +V T+N MI  
Sbjct: 482 MSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDK 541

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           L  +G++ +A  LF  M      PNV+ + T+IHG+    +  +V++LL  M    + P 
Sbjct: 542 LFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPT 601

Query: 366 ASIVSMVVD 374
           A   + ++D
Sbjct: 602 AVTFNTLLD 610



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 183/356 (51%), Gaps = 2/356 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMK--GENINPDVVTYNSLIHGLCHANDWNE 69
           C P+  +Y T++ GLC E   ++A  L   M   G+N  P+VV+Y ++IHG     D  +
Sbjct: 211 CTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGK 270

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  LF +M+D G+ P+VVT N ++D LCK   MD+A  +L  M+   + PN  TY++L+ 
Sbjct: 271 AYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIH 330

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+  +G+   A  +   M   G + + V+Y++LI+  CK+    EA  ++  M+  G KP
Sbjct: 331 GYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKP 390

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
              TY +L  G      +     + + M ++ +      +N  I   CK G + EA   F
Sbjct: 391 NASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTF 450

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +       DI AY  +IDGLCK GRL+ A+  F  +    L  D++T+N +IHG    
Sbjct: 451 NKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALH 510

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           G+ +KA +LF +M +  + PNV  F ++I    +  K ++  +L   M      P+
Sbjct: 511 GKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPN 566



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 190/401 (47%), Gaps = 38/401 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+  +I   C  G ++   A   Q+    +    VT+  L+  LC     ++A  +
Sbjct: 142 PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNI 201

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR--DVRPNAFTYSTLMDG 130
               M + G  P V ++  ++  LC   K +EA+ L+ +M +   +  PN  +Y+T++ G
Sbjct: 202 VLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHG 261

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           F   G + +A  LF  M   G   + V+ N +I+G CK + +++A ++ ++M+ + I P 
Sbjct: 262 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 321

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             TYN+L  G     Q   A+++ +EM RD    +  TY+  ID LCK+G   EA E+F 
Sbjct: 322 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFN 381

Query: 251 TLGILKCELDIQAYNCLIDGL-----------------------------------CKSG 275
           ++     + +   Y  L+ G                                    CK G
Sbjct: 382 SMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCG 441

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           RL+ A   F  + ++  + D+V Y  +I GLC  G++D A   F  M ++ ++P++I F 
Sbjct: 442 RLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFN 501

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           TLIHGF    K  K  EL ++M ++ + P+ +  + ++D L
Sbjct: 502 TLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKL 542



 Score =  164 bits (414), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 160/316 (50%), Gaps = 25/316 (7%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN---DWNE 69
           +PN VTY+ +ID LCK G   +A+ +F  M      P+  TY SL+HG        D N 
Sbjct: 354 RPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNN 413

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
            K L   M+  G++P    FN+ +   CK G++DEAS   + M Q+   P+   Y+T++D
Sbjct: 414 VKDL---MVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVID 470

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C  G+++ A   F  M   G   D +++N LI+G+  + + E+A  L+ EM+ +GI P
Sbjct: 471 GLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPP 530

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL- 248
            V T+N++   LF+  +V  A KLF+ M R     +  +YNT I G    G + E ++L 
Sbjct: 531 NVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLL 590

Query: 249 --------------FRTL--GILKCELDIQAYNC--LIDGLCKSGRLEIALELFRSLPRR 290
                         F TL  G++   L      C  LID  C+ GR+E  L LFR +  +
Sbjct: 591 DDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGK 650

Query: 291 VLVADVVTYNIMIHGL 306
               D +T NI + G+
Sbjct: 651 ADKTDTITENIKLRGV 666



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 167/336 (49%), Gaps = 3/336 (0%)

Query: 44  GENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMD 103
            + + PD+ T+  LI   C A   N       +++  G++   VTF  ++  LC   +  
Sbjct: 137 AKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTS 196

Query: 104 EASRL-LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG--CKHDDVSYN 160
           +A  + L  M +    P+ F+Y+TL+ G C   K   A EL   M   G  C  + VSY 
Sbjct: 197 DAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYT 256

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            +I+G+ K  +V +A +L+ +M+  GI P VVT N++  GL ++  ++ A  + ++M  +
Sbjct: 257 TVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDE 316

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            +  + +TYN+ I G   +G   EAV + + +       ++  Y+ LID LCKSG    A
Sbjct: 317 HIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEA 376

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            E+F S+ +     +  TY  ++HG   +G +   +++   M +N + P   +F   I+ 
Sbjct: 377 REIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYA 436

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + +  +  +     +KM+++  MPD    + V+D L
Sbjct: 437 YCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGL 472



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 13/164 (7%)

Query: 208 EHALKLFEEM-QRDDVAAD-------TSTYNTFIDGLCKNGYIVEAVELFRTL---GILK 256
           E AL LF+E+ QR    +        T+     +    ++G  + AV +F  +   G  K
Sbjct: 81  EDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPAL-AVSMFNRMARAGAKK 139

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              DI  +  LI   C +G L +       + +  L A  VT+  ++  LC + +   A 
Sbjct: 140 VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAM 199

Query: 317 DLFL-DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           ++ L  M E    P+V  + TL+ G     K  +  EL+H M E
Sbjct: 200 NIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAE 243


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 199/359 (55%), Gaps = 3/359 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G+   P+ + +N +I  LC++G V +++ L  ++    ++P++ T N  I G C     
Sbjct: 208 LGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAML 267

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           NEA RL  + + +G+ P V+T+N ++  LCKN K+ EA   L  MV     P+ FTY+++
Sbjct: 268 NEAIRL-LDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSI 326

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DG+C  G +  A+++       G   D+ +Y  LING C++ +++ A++++ E + KG+
Sbjct: 327 IDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGL 386

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP +V  NTL  GL +   +  ALKL  EM  +  + D  TYN  I+GLCK G + +A  
Sbjct: 387 KPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADN 446

Query: 248 LFRTLGILKCEL-DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           L     I K  L D+  +N LIDG CK  +L+ A+E+   +    +  DV+TYN +++GL
Sbjct: 447 LVID-AIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGL 505

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           C  G+ +     F  M E    PN+I +  L   F +  K  + + L+ +M+ K + PD
Sbjct: 506 CKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPD 564



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 186/353 (52%), Gaps = 1/353 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY ++I+GLC++G +D+A  +F +   + + P++V  N+L+ GL       +A +L
Sbjct: 353 PDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKL 412

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM + G  P + T+N++++ LCK G + +A  L+   + +   P+ FT++TL+DG+C 
Sbjct: 413 MNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCK 472

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K++ A E+   M + G   D ++YN ++NG CK  + E+ +  ++ M+ KG  P ++T
Sbjct: 473 KLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIIT 532

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L     +  +VE AL L EEMQ   +  D   + T + G C NG +  A +LF+ + 
Sbjct: 533 YNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVD 592

Query: 254 -ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K    I  YN +I+       + +A +LF  +       D  TY +MI G C  G +
Sbjct: 593 EQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNI 652

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +  +   L   E  + P++  F  +++      +  + + ++H M  K ++P+
Sbjct: 653 NSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPE 705



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 194/371 (52%), Gaps = 7/371 (1%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G    P+ +TYNT+I GLCK   V +A+    +M  E   PD  TYNS+I G C     
Sbjct: 277 VGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMM 336

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A ++  +   +G  P   T+  +++ LC++G +D A  + +  +++ ++PN    +TL
Sbjct: 337 QNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTL 396

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G    G I +A +L   M   GC  D  +YN++ING CK   V +A +L  + ++KG 
Sbjct: 397 VKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGH 456

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P V T+NTL  G  +  ++++A+++ + M    V+ D  TYN+ ++GLCK G   + + 
Sbjct: 457 LPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMG 516

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            F+ +    C  +I  YN L +  CK+ ++E AL L   +  + L  DVV +  ++ G C
Sbjct: 517 TFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFC 576

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVI----IFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           ++G +D A+ LF  ++E     + I    I +    G + +N   K   L +KM E    
Sbjct: 577 DNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEK---LFNKMCENGFS 633

Query: 364 PDASIVSMVVD 374
           PD+    +++D
Sbjct: 634 PDSYTYRVMID 644



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 193/389 (49%), Gaps = 36/389 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDV-------------------- 51
           C+P+  +YN I++ L +  + D+A  ++++M+ + I PDV                    
Sbjct: 107 CEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAAR 166

Query: 52  ---------------VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
                          V Y ++I G    N   EA  LF EM+  G+ P ++ FN ++  L
Sbjct: 167 RLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTL 226

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           C+ G + E+ RLL+ +++R V PN FT +  + GFC    +N A  L   +   G   D 
Sbjct: 227 CRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGV-GRGLTPDV 285

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           ++YN LI G CKN +V EA    R+MV++G +P   TYN++  G  ++  +++A ++  +
Sbjct: 286 ITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRD 345

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
                   D STY + I+GLC++G I  A+ +F        + ++   N L+ GL + G 
Sbjct: 346 GAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGL 405

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +  AL+L   +       D+ TYN++I+GLC  G +  A +L +D       P+V  F T
Sbjct: 406 ILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNT 465

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LI G+ +  K    IE++ +M    V PD
Sbjct: 466 LIDGYCKKLKLDNAIEIVDRMWNHGVSPD 494



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 186/365 (50%), Gaps = 1/365 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TYN+IIDG CK G +  A  +      +   PD  TY SLI+GLC   D + A  
Sbjct: 317 EPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAIN 376

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F E M++G++P++V  N ++  L + G + +A +L++ M +    P+ +TY+ +++G C
Sbjct: 377 VFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLC 436

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A+ L     + G   D  ++N LI+GYCK  +++ A+ +   M + G+ P V+
Sbjct: 437 KIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVI 496

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN++  GL +  + E  +  F+ M       +  TYN   +  CK   + EA+ L   +
Sbjct: 497 TYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEM 556

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV-TYNIMIHGLCNDGQ 311
                  D+  +  L+ G C +G L+ A +LF+ +  +   +  + TYNIMI+       
Sbjct: 557 QNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLN 616

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           M+ A  LF  M EN  +P+   +  +I GF +    +     L    EK ++P  +    
Sbjct: 617 MNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGR 676

Query: 372 VVDLL 376
           V++ L
Sbjct: 677 VLNCL 681



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 184/349 (52%), Gaps = 1/349 (0%)

Query: 28  KEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVV 87
           ++G + +A  +F +M   N  P V +YN++++ L     +++A +++  M D+G+ P V 
Sbjct: 88  RKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVY 147

Query: 88  TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
           TF + M   C+  +   A RLL+ M  +    +A  Y T++ GF        A ELF  M
Sbjct: 148 TFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEM 207

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
             +G   D +++N LI+  C+   V+E+  L  +++ +G+ P + T N    G  +   +
Sbjct: 208 LGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAML 267

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
             A++L + + R  +  D  TYNT I GLCKN  +VEA    R +     E D   YN +
Sbjct: 268 NEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSI 326

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           IDG CK G ++ A ++ R    +  V D  TY  +I+GLC DG +D+A ++F +  E  +
Sbjct: 327 IDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGL 386

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            PN+++  TL+ G  +     + ++L+++M E    PD    ++V++ L
Sbjct: 387 KPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGL 435



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 163/321 (50%), Gaps = 1/321 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V  NT++ GL ++G + +A  L  +M     +PD+ TYN +I+GLC     ++A  
Sbjct: 387 KPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADN 446

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  + + +G  P V TFN ++D  CK  K+D A  ++D M    V P+  TY+++++G C
Sbjct: 447 LVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLC 506

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK       F  M   GC  + ++YNIL   +CK ++VEEAL+L  EM +KG+ P VV
Sbjct: 507 KAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVV 566

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT-STYNTFIDGLCKNGYIVEAVELFRT 251
            + TL  G  +   ++ A +LF+ +      + T +TYN  I+       +  A +LF  
Sbjct: 567 NFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNK 626

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D   Y  +IDG CK+G +            + L+  + T+  +++ LC   +
Sbjct: 627 MCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRR 686

Query: 312 MDKAHDLFLDMEENAVAPNVI 332
           + +A  +   M    + P V+
Sbjct: 687 VHEAVGIIHLMVHKGIVPEVV 707



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 136/298 (45%), Gaps = 4/298 (1%)

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           + G + +++T+  ++++L  +G+ +    +L +  +  D       Y   M  +   GKI
Sbjct: 33  EDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVYIGAMRNYGRKGKI 92

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A ++F  M+   C+    SYN ++N   + +  ++A  +Y  M  KGI P V T+   
Sbjct: 93  QEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIR 152

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT-LGILK 256
                   +   A +L   M      +    Y T I G  +  + VEA ELF   LG+  
Sbjct: 153 MKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGI 212

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
           C  DI A+N LI  LC+ G ++ +  L   + +R +  ++ T NI I G C    +++A 
Sbjct: 213 CP-DIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAI 271

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            L LD     + P+VI + TLI G  +  K  +    L KM  +   PD    + ++D
Sbjct: 272 RL-LDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIID 328


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 115/326 (35%), Positives = 179/326 (54%), Gaps = 4/326 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTYN++I GLCK     +A  L  +M      PD+ TY +LI G C +   ++A R+
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR-DVRPNAFTYSTLMDGFC 132
           F +++ +G +P VVT++ ++D LCK G++ EA  L   M++     PN  TY++L+ GFC
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK++ A  L   M   G   D V+Y  L+NG+CK   +++A  L  +M  KG+ P VV
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+ +L  GL   +++  A+ +  EM+R   +    TYNT +DG C+   + EA +    L
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--L 289

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             + C  ++ ++N +I GLCK  R   A+EL     RR    DVV Y  +I  LC + ++
Sbjct: 290 EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKV 349

Query: 313 DKAHDLFLDM-EENAVAPNVIIFVTL 337
           D+A  ++  M EE    PN I + T 
Sbjct: 350 DEACRVYRKMLEEPGCLPNSITYSTF 375



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 107/320 (33%), Positives = 174/320 (54%), Gaps = 4/320 (1%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P  VTYNSLI GLC A   +EA  L  EM+  G  P + T+  ++   CK+ K D+A R+
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM-ESMGCKHDDVSYNILINGYC 167
            + +V R  RP+  TYS L+DG C  G++  A +LFG M +S  C  + V+YN LI+G+C
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           +  +++EA++L   M   G  P VVTY TL  G  ++ +++ A  L  +M R  +  +  
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           T+ + +DGLC+   + +AV +   +    C   +  YN ++DG C+  +LE A +    L
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--L 289

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
                  +VV++NIMI GLC   +  +A +L  +       P+V+++ T+I    R  K 
Sbjct: 290 EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKV 349

Query: 348 SKVIELLHKM-KEKKVMPDA 366
            +   +  KM +E   +P++
Sbjct: 350 DEACRVYRKMLEEPGCLPNS 369



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 100/278 (35%), Positives = 149/278 (53%), Gaps = 5/278 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TY T+I G CK    D A  +F Q+      PDVVTY+ LI GLC      EA 
Sbjct: 85  CIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAI 144

Query: 72  RLFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            LF  M+  G   P+ VT+N ++   C+ GKMDEA  LL+ M +    P+  TY+TLM+G
Sbjct: 145 DLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNG 204

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC   +++ A +L   M   G   + V++  L++G C+   + +A+ +  EM  K   PT
Sbjct: 205 FCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPT 264

Query: 191 VVTYNTLFLGLFEIHQVEHALK-LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           V TYNT+  G   ++Q+E A K + EEM   D   +  ++N  I GLCK     EA+EL 
Sbjct: 265 VYTYNTILDGYCRVNQLEEARKFMLEEM---DCPPNVVSFNIMIRGLCKVNRSSEAMELV 321

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
                 +C  D+  Y  +ID LC+  +++ A  ++R +
Sbjct: 322 EEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKM 359



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 164/311 (52%), Gaps = 3/311 (0%)

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           W   +     + D    P+ VT+N ++  LCK  +  EA  LL+ MV     P+ FTY+T
Sbjct: 35  WPGRRGCGAAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTT 94

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ GFC + K + A  +F  + + G + D V+Y+ LI+G CK   ++EA+ L+  M+  G
Sbjct: 95  LITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 154

Query: 187 -IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
              P  VTYN+L  G   + +++ A+ L E M     + D  TY T ++G CK   + +A
Sbjct: 155 SCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDA 214

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            +L   +       ++  +  L+DGLC+  RL  A+ +   + R+     V TYN ++ G
Sbjct: 215 YDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDG 274

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            C   Q+++A    L  EE    PNV+ F  +I G  ++N+ S+ +EL+ + + ++  PD
Sbjct: 275 YCRVNQLEEARKFML--EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPD 332

Query: 366 ASIVSMVVDLL 376
             + + V+D+L
Sbjct: 333 VVMYTTVIDVL 343



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 126/222 (56%), Gaps = 3/222 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNTVTYN++I G C+ G +D+A  L  +M     +PDVVTY +L++G C     ++A 
Sbjct: 156 CMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAY 215

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +M  +G+ P+VVTF  +MD LC+  ++ +A  +L  M ++   P  +TY+T++DG+
Sbjct: 216 DLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGY 275

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++  A +    +E M C  + VS+NI+I G CK     EA+ L  E   +   P V
Sbjct: 276 CRVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDV 333

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTF 232
           V Y T+   L    +V+ A +++ +M +      ++ TY+TF
Sbjct: 334 VMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 187/352 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTYN ++ GLC+ G +D+ + L  +M   ++ PD  TY+ L  GL    +      
Sbjct: 83  KPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLS 142

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF E + +GV     T +++++ LCK+GK+ +A ++L+++V   + P    Y+TL++G+C
Sbjct: 143 LFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYC 202

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +  A  +F  M+S   + D ++YN LING CK + V +A  L  EM   G+ P+V 
Sbjct: 203 QVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVE 262

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL        Q+E    +  +MQ+  + +D  ++ + +   CKNG I EAV +   +
Sbjct: 263 TFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDM 322

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  + Q YN +ID   +SG  E A  L   +    + A +VTYN+++ GLC   Q+
Sbjct: 323 IYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQI 382

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           D+A +L   +    + P+V+ + T+I          K +ELL +M +  + P
Sbjct: 383 DEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 434



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 186/357 (52%), Gaps = 2/357 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +YN +I GL + G    A  +F +M    + P+ +TYN++I G     D     RL
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+  G +P++VT+NV++  LC+ G+MDE   L+D M    + P+ FTYS L DG   
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG+      LF      G      + +IL+NG CK+ +V +A  +   +V  G+ PT V 
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G  ++  +  A  +FE+M+   +  D  TYN  I+GLCK   + +A +L   + 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +  ++ +N LID    +G+LE    +   + ++ + +DV+++  ++   C +G++ 
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +A  +  DM    VAPN  ++ ++I  ++      +   L+ KMK   V   ASIV+
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGV--SASIVT 368



 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 181/348 (52%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T + +++GLCK+G V KA+ +   +    + P  V YN+LI+G C   D   A  +F +M
Sbjct: 158 TCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 217

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
             + ++P  +T+N +++ LCK   + +A  L+  M +  V P+  T++TL+D +   G++
Sbjct: 218 KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQL 277

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
            +   +   M+  G K D +S+  ++  +CKN ++ EA+++  +M+ K + P    YN++
Sbjct: 278 EKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSI 337

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
                E    E A  L E+M+   V+A   TYN  + GLC++  I EA EL  TL     
Sbjct: 338 IDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGL 397

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D+ +YN +I   C  G  + ALEL + + +  +   + TY+ ++  L + G++     
Sbjct: 398 RPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMEC 457

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           L+  M    V P+  I+  ++  +VR    SKV  L  +M EK +  D
Sbjct: 458 LYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 163/326 (50%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           PD  +YN +I GL  +   ++A ++F EM+D GV P+ +T+N ++D   K G ++   RL
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
            D M+    +PN  TY+ L+ G C  G+++    L   M S     D  +Y+IL +G  +
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             E    LSL+ E + KG+     T + L  GL +  +V  A ++ E +    +   T  
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           YNT I+G C+   +  A  +F  +       D   YN LI+GLCK   +  A +L   + 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
           +  +   V T+N +I      GQ++K   +  DM++  +  +VI F +++  F +  K  
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVD 374
           + + +L  M  K V P+A + + ++D
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIID 339



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 143/261 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ +TYN +I+GLCK   V KA+ L ++M+   ++P V T+N+LI     A    +   
Sbjct: 223 RPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFT 282

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M  +G++  V++F  ++   CKNGK+ EA  +LD M+ +DV PNA  Y++++D + 
Sbjct: 283 VLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYI 342

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G   +A  L   M++ G     V+YN+L+ G C++ +++EA  L   + ++G++P VV
Sbjct: 343 ESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 402

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNT+          + AL+L +EM +  +     TY+T +  L   G + +   L++ +
Sbjct: 403 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM 462

Query: 253 GILKCELDIQAYNCLIDGLCK 273
                E     Y  ++D   +
Sbjct: 463 LHKNVEPSSSIYGIMVDAYVR 483



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 94/174 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   YN+IID   + G  ++A  L  +MK   ++  +VTYN L+ GLC ++  +EA+ L
Sbjct: 329 PNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 388

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            + + +QG++P VV++N I+   C  G  D+A  LL  M +  +RP   TY TL+     
Sbjct: 389 IYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALAS 448

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
            G+++  E L+  M     +     Y I+++ Y + +   +  SL +EM  KGI
Sbjct: 449 AGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 502



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 107/213 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + +++ +++   CK G + +A A+   M  +++ P+   YNS+I     + D  +A  
Sbjct: 293 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFL 352

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M + GV  S+VT+N+++  LC++ ++DEA  L+  +  + +RP+  +Y+T++   C
Sbjct: 353 LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACC 412

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  ++A EL   M   G +    +Y+ L++       V +   LY++M+ K ++P+  
Sbjct: 413 NKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSS 472

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
            Y  +               L +EM    +A D
Sbjct: 473 IYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 76/141 (53%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTYN ++ GLC+   +D+A+ L   ++ + + PDVV+YN++I   C+  D ++A  L  E
Sbjct: 367 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 426

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M   G++P++ T++ ++  L   G++ +   L   M+ ++V P++  Y  ++D +     
Sbjct: 427 MNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCEN 486

Query: 137 INRAEELFGSMESMGCKHDDV 157
            ++   L   M   G   DD 
Sbjct: 487 DSKVASLKKEMSEKGIAFDDT 507


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/352 (34%), Positives = 189/352 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT + ++ GLCK+G   +A ALF +M+     P+ VTY  LI  L  A   NE+  L
Sbjct: 277 PDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSL 336

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             E++ +GV   ++ +  +MD LCK GK+DEA  +    +  +  PN  TY+ L+D  C 
Sbjct: 337 LGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCK 396

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ AE++   ME      + V+++ +ING  K   V +A    REM  +GI P VVT
Sbjct: 397 AGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVT 456

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y T+  G F+    E AL ++ EM  + V  +    ++ ++GL KNG I +A  LFR + 
Sbjct: 457 YGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMN 516

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                LD   Y  LIDGL K+G L  A ++ + L  + L+ D V YN+ I+ LC  G+  
Sbjct: 517 ERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSK 576

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A     +M+   + P+ + + T+I    R  K +K ++LL+ MK   + P+
Sbjct: 577 EAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPN 628



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/345 (32%), Positives = 179/345 (51%), Gaps = 2/345 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALF-LQMKGENINP-DVVTYNSLIHGLCHANDWNEAKR 72
           + VT NT++ GLC++G VD+A AL  + ++G  I   DVV +NSL+ G C   D   A  
Sbjct: 136 DAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFA 195

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M  QGV   VV +N ++  LC+ G++D A  ++D M +  V PN  TY+  +  +C
Sbjct: 196 VAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYC 255

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               ++ A  L+  M   G   D V+ + L+ G CK+    EA +L+REM   G  P  V
Sbjct: 256 RRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHV 315

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L   L +  +   +L L  E+    V  D   Y   +D LCK G I EA ++FR  
Sbjct: 316 TYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHA 375

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +   Y  LID LCK+G ++ A ++   +  + +  +VVT++ +I+GL   G +
Sbjct: 376 LSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWV 435

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            KA D   +M+E  + PNV+ + T+I G  +       +++ H+M
Sbjct: 436 GKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEM 480



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 204/411 (49%), Gaps = 39/411 (9%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M  G G  G+    + V +N+++DG CK G ++ A A+  +MK + +  DVV YNSL+ G
Sbjct: 163 MVRGGGIGGL----DVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAG 218

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           LC A + + A+ +   M   GV+P+VVT+ + + E C+   +D+A  L + MV++ V P+
Sbjct: 219 LCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPD 278

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             T S L+ G C  G+ + A  LF  ME +G   + V+Y +LI+   K +   E+LSL  
Sbjct: 279 VVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLG 338

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           E+VS+G+   ++ Y  L   L +  +++ A  +F     D+   +  TY   ID LCK G
Sbjct: 339 EVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAG 398

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            +  A ++   +       ++  ++ +I+GL K G +  A +  R +  R +  +VVTY 
Sbjct: 399 NVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYG 458

Query: 301 IMI-----------------------------------HGLCNDGQMDKAHDLFLDMEEN 325
            +I                                   +GL  +G+++KA  LF +M E 
Sbjct: 459 TVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNER 518

Query: 326 AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            V  + + + TLI G  +        ++  ++ EK ++PDA + ++ ++ L
Sbjct: 519 GVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCL 569



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 189/426 (44%), Gaps = 78/426 (18%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  +ID LCK G VD A+ +  +M+ ++I+P+VVT++S+I+GL       +A   
Sbjct: 382 PNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDY 441

Query: 74  FFEMMDQGVQPSVVTFNVIMDE-----------------LC------------------K 98
             EM ++G+ P+VVT+  ++D                  LC                  K
Sbjct: 442 MREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKK 501

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG---------------------------- 130
           NGK+++A  L   M +R V  +   Y+TL+DG                            
Sbjct: 502 NGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVV 561

Query: 131 -------FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
                   C+ GK   AE     M+S G K D V+YN +I    +  +  +AL L   M 
Sbjct: 562 YNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMK 621

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG--- 240
              IKP ++TY+TL +GLFE   VE A  L  EM     +  + T+   +   C  G   
Sbjct: 622 RSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQA-CSQGRRS 680

Query: 241 -YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
             I+E  E     G+     DI  YN L+  LC +G    A+ +   +  R +  D +T+
Sbjct: 681 DLILEIHEWMMNAGLCA---DITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITF 737

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           N +I G    G +D A   +  M  + ++PNV  F TL+ G     +  +   +L++MK+
Sbjct: 738 NALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKK 797

Query: 360 KKVMPD 365
           + + P 
Sbjct: 798 RGIEPS 803



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 188/361 (52%), Gaps = 2/361 (0%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           + Y  ++D LCKEG +D+AK +F     +N  P+ VTY  LI  LC A + + A+++  E
Sbjct: 350 IMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSE 409

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG-FCLTG 135
           M ++ + P+VVTF+ I++ L K G + +A+  +  M +R + PN  TY T++DG F   G
Sbjct: 410 MEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLG 469

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           +   A +++  M   G + +    + L+NG  KN ++E+A +L+REM  +G+    V Y 
Sbjct: 470 Q-EAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYT 528

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           TL  GLF+   +  A K+ +E+   ++  D   YN FI+ LC  G   EA      +   
Sbjct: 529 TLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQST 588

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
             + D   YN +I    + G+   AL+L   + R  +  +++TY+ +I GL   G ++KA
Sbjct: 589 GLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKA 648

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
             L  +M  +  +P  +    ++    +  +   ++E+   M    +  D ++ + +V +
Sbjct: 649 KYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRV 708

Query: 376 L 376
           L
Sbjct: 709 L 709



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 177/391 (45%), Gaps = 35/391 (8%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V Y T+IDGL K G +  A  +  ++  +N+ PD V YN  I+ LC      EA+    E
Sbjct: 525 VNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEE 584

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M   G++P  VT+N ++    + GK  +A +LL+ M +  ++PN  TYSTL+ G    G 
Sbjct: 585 MQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGA 644

Query: 137 INRAEELFGSMESMG--------------CKH---------------------DDVSYNI 161
           + +A+ L   M S G              C                       D   YN 
Sbjct: 645 VEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNT 704

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L+   C N    +A+ +  EM  +GI P  +T+N L LG F+   +++A   +++M    
Sbjct: 705 LVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHG 764

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           ++ + +T+NT + GL   G I E+  +   +     E     Y+ L+ G  K      A+
Sbjct: 765 ISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAV 824

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            L+  +  +  +  V TYN +I      G M +A +LF +M+   V P    +  L+ G+
Sbjct: 825 RLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGW 884

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            ++   ++V + L  MKEK   P    +S +
Sbjct: 885 SKLRNGTEVRKFLKDMKEKGFSPSKGTLSSI 915



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 161/353 (45%), Gaps = 17/353 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTYNT+I    +EG   KA  L   MK  +I P+++TY++LI GL  A    +AK 
Sbjct: 591 KPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKY 650

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM   G  P+ +T   ++    +  + D    + + M+   +  +   Y+TL+   C
Sbjct: 651 LLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLC 710

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G   +A  +   M   G   D +++N LI G+ K+  ++ A S Y +M+  GI P V 
Sbjct: 711 YNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVA 770

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL  GL    ++  +  +  EM++  +     TY+  + G  K    VEAV L+   
Sbjct: 771 TFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLY--- 827

Query: 253 GILKCEL-------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
               CE+        +  YN LI    K G +  A ELF  +  R ++    TY+I++ G
Sbjct: 828 ----CEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSG 883

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
                   +      DM+E   +P+     ++   F   +KP    E    +K
Sbjct: 884 WSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAF---SKPGMSWEARRLLK 933



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 130/259 (50%), Gaps = 3/259 (1%)

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           +  +Y+ +M GF   G +   E L   M   G   D V+ N ++ G C++  V+ A +L 
Sbjct: 102 DTVSYNVVMSGFSEQGGLA-PEALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160

Query: 180 REMVSKGI--KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
             MV  G      VV +N+L  G  ++  +E A  + E M+   V  D   YN+ + GLC
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           + G +  A ++  T+     E ++  Y   I   C+   ++ A  L+  + R+ ++ DVV
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           T + ++ GLC DG+  +A+ LF +ME+   APN + +  LI    +  + ++ + LL ++
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEV 340

Query: 358 KEKKVMPDASIVSMVVDLL 376
             + V+ D  + + ++D L
Sbjct: 341 VSRGVVMDLIMYTALMDWL 359



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 1/242 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +C   TV YNT++  LC  G   KA  +  +M G  I PD +T+N+LI G   +   + A
Sbjct: 695 LCADITV-YNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNA 753

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
              + +M+  G+ P+V TFN ++  L   G++ E+  +L+ M +R + P+  TY  L+ G
Sbjct: 754 FSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTG 813

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +        A  L+  M   G      +YN LI+ + K   + +A  L+ EM ++G+ PT
Sbjct: 814 YGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPT 873

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             TY+ L  G  ++       K  ++M+    +    T ++      K G   EA  L +
Sbjct: 874 SCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLK 933

Query: 251 TL 252
            L
Sbjct: 934 NL 935


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 122/363 (33%), Positives = 187/363 (51%), Gaps = 1/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY ++I G C+   +D A  +F +M  +    + V Y  LIHGLC     +EA  L
Sbjct: 251 PDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDL 310

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M D    P+V T+ V++  LC + +  EA  L+  M ++ ++PN  TY+ L+D  C 
Sbjct: 311 FVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCS 370

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+ +A EL G M   G   + ++YN LINGYCK   +E+AL +   M S+ ++P   T
Sbjct: 371 QCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRT 430

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +   V  A+ +  +M    V  D  TYN+ IDG C++G    A  L   + 
Sbjct: 431 YNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D   Y  +ID LCKS R+E A +LF SL ++ ++ +VV Y  +I G C  G+++
Sbjct: 490 DRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVN 549

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +AH +   M      PN + F  LIHG     K  +   L  KM +  + P  S  ++++
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILI 609

Query: 374 DLL 376
             L
Sbjct: 610 HRL 612



 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 120/356 (33%), Positives = 188/356 (52%), Gaps = 2/356 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC PN  TYN +++G CK G V++A      +    ++PD  TY SLI G C   D + A
Sbjct: 214 VC-PNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSA 272

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            ++F EM  +G + + V +  ++  LC   ++DEA  L   M   D  P   TY+ L+  
Sbjct: 273 FKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKA 332

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C + + + A  L   ME  G K +  +Y +LI+  C   ++E+A  L  +M+ KG+ P 
Sbjct: 333 LCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPN 392

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V+TYN L  G  +   +E AL + E M+  ++  +T TYN  I G CK   + +A+ +  
Sbjct: 393 VITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLN 451

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +   K   D+  YN LIDG C+SG  + A  L   +  R LV D  TY  MI  LC   
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSK 511

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           ++++A DLF  +E+  V PNV+++  LI G+ +  K ++   +L KM  K  +P++
Sbjct: 512 RVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNS 567



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 192/396 (48%), Gaps = 34/396 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N V Y  +I GLC E  +D+A  LF++MK ++  P V TY  LI  LC +   +EA 
Sbjct: 284 CRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEAL 343

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM ++G++P++ T+ V++D LC   K+++A  LL  M+++ + PN  TY+ L++G+
Sbjct: 344 NLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGY 403

Query: 132 CLTGKINRAEELFGSMESMG---------------CKH-------------------DDV 157
           C  G I  A ++   MES                 CK                    D V
Sbjct: 404 CKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVV 463

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +YN LI+G C++   + A  L   M  +G+ P   TY ++   L +  +VE A  LF+ +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSL 523

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
           ++ DV  +   Y   IDG CK G + EA  +   +    C  +   +N LI GLC  G+L
Sbjct: 524 EQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKL 583

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A  L   + +  L   V T  I+IH L  DG  D A+  F  M  +   P+   + T 
Sbjct: 584 KEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTF 643

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           I  + R  +     +++ KMKE  V PD    S ++
Sbjct: 644 IQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLI 679



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 179/372 (48%), Gaps = 54/372 (14%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PNT TYN +I G CK   V KA  +  +M    + PDVVTYNSLI G C + +++ A R
Sbjct: 425 RPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M D+G+ P   T+  ++D LCK+ +++EA  L D + Q+DV PN   Y+ L+DG+C
Sbjct: 484 LLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYC 543

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+N A  +   M S  C  + +++N LI+G C + +++EA  L  +MV   ++PTV 
Sbjct: 544 KAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVS 603

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T   L   L +    +HA + F++M       D  TY TFI   C+ G            
Sbjct: 604 TDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREG------------ 651

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                                  RL+ A ++   +    +  D+ TY+ +I G  + G+ 
Sbjct: 652 -----------------------RLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRT 688

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLI-------HGFVRINKPSK-----------VIELL 354
           + A  +   M +    P+   F++LI       +G V+  +P             V+ELL
Sbjct: 689 NSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELL 748

Query: 355 HKMKEKKVMPDA 366
            KM E  V P+A
Sbjct: 749 EKMVEHGVTPNA 760



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 164/348 (47%), Gaps = 19/348 (5%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN++T+N +I GLC +G + +A  L  +M   ++ P V T   LIH L    D++ A 
Sbjct: 563 CLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAY 622

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R F +M+  G +P   T+   +   C+ G++ +A  ++  M +  V P+ FTYS+L+ G+
Sbjct: 623 RRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGY 682

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILIN-----GYCKNK-------------EVE 173
              G+ N A  +   M   GC+    ++  LI       Y K K             E +
Sbjct: 683 GDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFD 742

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTF 232
             + L  +MV  G+ P   +Y  L LG+ EI  +  A K+F+ M Q++ ++     +N  
Sbjct: 743 IVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNAL 802

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           +   CK     EA ++   +  +     +++   LI  L K G  E    +F++L +   
Sbjct: 803 LSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGY 862

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
             D + + I+I G+   G ++  ++LF  ME+N    +   +  LI G
Sbjct: 863 YDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 110/222 (49%), Gaps = 7/222 (3%)

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D V+  + +   C+    +E+  L  +++       +  YNTL   L     V+   +++
Sbjct: 154 DSVADTLFVLDLCRKMNKDESFELKYKLI-------IGCYNTLLNSLARFGLVDEMKQVY 206

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
            EM  D V  +  TYN  ++G CK G + EA +    +     + D   Y  LI G C+ 
Sbjct: 207 MEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQR 266

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
             L+ A ++F+ +P +    + V Y  +IHGLC + ++D+A DLF+ M+++   P V  +
Sbjct: 267 KDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTY 326

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             LI       + S+ + L+ +M+EK + P+    ++++D L
Sbjct: 327 TVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSL 368


>gi|218194640|gb|EEC77067.1| hypothetical protein OsI_15461 [Oryza sativa Indica Group]
          Length = 548

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 114/346 (32%), Positives = 191/346 (55%), Gaps = 1/346 (0%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTF-N 90
           +D A   F  M    +  D   Y  LI G C+  D  +AK L  +M+ +G+ P  + F  
Sbjct: 173 LDDAMEKFKHMIDIGVPLDTAVYGCLIQGQCNRGDLVKAKELISDMLSKGIPPPCIKFFT 232

Query: 91  VIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
            I++ LCK G++ E   ++DL++    RPN  T+++L+DG+CL G +  A  L  SMES+
Sbjct: 233 SIINNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESV 292

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G + D  +YN L++GYCK+  +++AL+L+R+M+ K +  T V+YN +  GLF+  +   A
Sbjct: 293 GVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTVVA 352

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
            ++F EM    +A    TY T + GLC+N    EA  L   L  +  + DI  +N +I  
Sbjct: 353 KEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRA 412

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           + K GR++ A ELF ++    LV  ++TY +MI  L  +   + A +LF  ME++   P+
Sbjct: 413 MFKVGRMQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSGCTPD 472

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             I   +I   +   + +K    L K+ +K ++P+A+  S+++ L 
Sbjct: 473 SCILNEIIRMLLNKGEIAKAGHYLSKIDKKGILPEATTTSLLIYLF 518



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 163/341 (47%), Gaps = 1/341 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTY-NSLIHGLCHANDWNEAKRL 73
           +T  Y  +I G C  G + KAK L   M  + I P  + +  S+I+ LC      E K +
Sbjct: 191 DTAVYGCLIQGQCNRGDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDI 250

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              ++  G +P+++TFN ++D  C  G M EA  LLD M    V P+ +TY+TL+DG+C 
Sbjct: 251 VDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCK 310

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+I+ A  LF  M         VSYNI+++G  + +    A  ++ EM+  G+  ++ T
Sbjct: 311 HGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTVVAKEMFHEMIESGMAVSIHT 370

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y T+  GL   +  + A  L E++   +V  D  T+N  I  + K G + EA ELF  + 
Sbjct: 371 YATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRMQEAKELFAAIS 430

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  I  Y  +I  L K    E A  LF S+ +     D    N +I  L N G++ 
Sbjct: 431 TYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSGCTPDSCILNEIIRMLLNKGEIA 490

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           KA      +++  + P       LI+ F    K  + I+LL
Sbjct: 491 KAGHYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLL 531



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 119/233 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +T+N+++DG C  G + +A  L   M+   + PD+ TYN+L+ G C     ++A  
Sbjct: 260 RPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALT 319

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF +M+ + V  + V++N+I+  L +  +   A  +   M++  +  +  TY+T++ G C
Sbjct: 320 LFRDMLHKRVTLTSVSYNIILHGLFQARRTVVAKEMFHEMIESGMAVSIHTYATVLGGLC 379

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                + A  L   + SM  K D +++NI+I    K   ++EA  L+  + + G+ PT++
Sbjct: 380 RNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRMQEAKELFAAISTYGLVPTIL 439

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           TY  +   L +    E A  LF  M++     D+   N  I  L   G I +A
Sbjct: 440 TYRVMITNLIKEESFEDADNLFSSMEKSGCTPDSCILNEIIRMLLNKGEIAKA 492



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 119/237 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TYNT++DG CK G +D A  LF  M  + +    V+YN ++HGL  A     AK 
Sbjct: 295 EPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTVVAKE 354

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM++ G+  S+ T+  ++  LC+N   DEA+ LL+ +   +V+ +  T++ ++    
Sbjct: 355 MFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMF 414

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A+ELF ++ + G     ++Y ++I    K +  E+A +L+  M   G  P   
Sbjct: 415 KVGRMQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSGCTPDSC 474

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             N +   L    ++  A     ++ +  +  + +T +  I     NG   E ++L 
Sbjct: 475 ILNEIIRMLLNKGEIAKAGHYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLL 531



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 118/228 (51%), Gaps = 4/228 (1%)

Query: 134 TGKINR---AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           TG+++R   A E F  M  +G   D   Y  LI G C   ++ +A  L  +M+SKGI P 
Sbjct: 167 TGRLDRLDDAMEKFKHMIDIGVPLDTAVYGCLIQGQCNRGDLVKAKELISDMLSKGIPPP 226

Query: 191 VVTYNTLFL-GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            + + T  +  L +  +V     + + +       +  T+N+ +DG C  G + EAV L 
Sbjct: 227 CIKFFTSIINNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLL 286

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
            ++  +  E DI  YN L+DG CK GR++ AL LFR +  + +    V+YNI++HGL   
Sbjct: 287 DSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQA 346

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            +   A ++F +M E+ +A ++  + T++ G  R N   +   LL K+
Sbjct: 347 RRTVVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL 394



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 37/203 (18%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY T++ GLC+    D+A  L  ++   N+  D++T+N +I  +       EAK LF  +
Sbjct: 370 TYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRMQEAKELFAAI 429

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
              G+ P+++T+ V++  L K    ++                                 
Sbjct: 430 STYGLVPTILTYRVMITNLIKEESFED--------------------------------- 456

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A+ LF SME  GC  D    N +I       E+ +A     ++  KGI P   T  +L
Sbjct: 457 --ADNLFSSMEKSGCTPDSCILNEIIRMLLNKGEIAKAGHYLSKIDKKGILPEATT-TSL 513

Query: 198 FLGLFEIH-QVEHALKLFEEMQR 219
            + LF ++ +    +KL  E  R
Sbjct: 514 LIYLFSVNGKYREYIKLLPEKYR 536



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 15/179 (8%)

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KPTV        G   + +++ A++ F+ M    V  DT+ Y   I G C  G +V+A E
Sbjct: 162 KPTV--------GTGRLDRLDDAMEKFKHMIDIGVPLDTAVYGCLIQGQCNRGDLVKAKE 213

Query: 248 LFRTL---GI-LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           L   +   GI   C   I+ +  +I+ LCK GR+    ++   +       +++T+N ++
Sbjct: 214 LISDMLSKGIPPPC---IKFFTSIINNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLV 270

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
            G C  G M +A  L   ME   V P++  + TL+ G+ +  +    + L   M  K+V
Sbjct: 271 DGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRV 329


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 201/365 (55%), Gaps = 3/365 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  ++  +I G  K G   +  +   +M    + P+ + YN+LI  LC A    EA+  
Sbjct: 27  PDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGMLAEAES- 85

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + + M Q   P+VV++N+I+D  CK   +++A   L  M +    P    YS+++  FC 
Sbjct: 86  YLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCK 145

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG +++A ++F  M + GC+ D V++N+L++G  + +++ EA  L+R M S+G KP VVT
Sbjct: 146 TGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVT 205

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+  GL +  +++ A+ L E M+++DV+    TY T ID LCK   + +A E+F  + 
Sbjct: 206 YNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMA 265

Query: 254 ILKCELDIQAYNC--LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
              C     AY+   LI+GLCK+ R   A E+F+ +  R +   VVTYN ++ GL +  +
Sbjct: 266 EGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAK 325

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +  A +L   M +   APN+  +  LI    + ++  +  +LL  M++K  +P   I  +
Sbjct: 326 LQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEV 385

Query: 372 VVDLL 376
           ++  L
Sbjct: 386 LLSRL 390



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/346 (33%), Positives = 183/346 (52%), Gaps = 2/346 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    Y++I+   CK G V KA  +F +M  +   PD+V +N L+ GL  A   +EA+ L
Sbjct: 131 PTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAREL 190

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M  +G +P VVT+N ++  LCK  K+DEA  LL+ M Q DV P   TY+TL+D  C 
Sbjct: 191 FRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCK 250

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYN--ILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
             ++ +A E+F  M    C   + +Y+  ILING CK +   EA  +++EM  +GI PTV
Sbjct: 251 FARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTV 310

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  GL    +++ A++L   M     A +  TY   I  LCK   + EA +L   
Sbjct: 311 VTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSA 370

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +        ++ +  L+  L ++GRL+ A EL++ + R      V + NI++ G+   G 
Sbjct: 371 MRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGS 430

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           +D+A D    M +  + P+   +  L+ G     K  +  +L+ ++
Sbjct: 431 VDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 476



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 151/310 (48%), Gaps = 5/310 (1%)

Query: 58  IHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV 117
           I  L  A+   +A+ +  EM   G  P V +  +++    K+G        LD M++  +
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
            PNA  Y+ L+   C  G +  AE     M    C  + VSYNI+I+GYCK + +E+AL+
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALA 119

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
             REM   G  PT   Y+++     +   V  A+ +F EM       D   +N  + GL 
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           +   I EA ELFR++    C+ D+  YN +I GLCK  +L+ A+ L   + +  +    V
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 239

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENA---VAPNVIIFVTLIHGFVRINKPSKVIELL 354
           TY  +I  LC   ++ +A+++F  M E       P   + + LI+G  +  +P +  E+ 
Sbjct: 240 TYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLI-LINGLCKARRPGEAKEMF 298

Query: 355 HKMKEKKVMP 364
            +M+ + + P
Sbjct: 299 QEMRGRGISP 308



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 142/281 (50%), Gaps = 4/281 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+ VTYNT+I GLCK   +D+A  L  +MK E+++P  VTY +LI  LC      +A 
Sbjct: 199 CKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAY 258

Query: 72  RLFFEMMDQGVQP---SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            +F E M +G  P      +  ++++ LCK  +  EA  +   M  R + P   TY+TL+
Sbjct: 259 EVF-EKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLL 317

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +G   T K+  A EL   M       +  +Y ILI+  CK  +VEEA  L   M  KG  
Sbjct: 318 EGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFV 377

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P++  +  L   L    +++ A +L++EM R +      + N  +DG+ + G + EA + 
Sbjct: 378 PSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDF 437

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
            + +       D   Y+ L+ GLC  G+ + A +L   L R
Sbjct: 438 LKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVR 478



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 112/209 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C     +   +I+GLCK     +AK +F +M+G  I+P VVTYN+L+ GL       +A 
Sbjct: 271 CTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAM 330

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L + M+DQ   P++ T+ +++  LCK  +++EA +LL  M  +   P+   +  L+   
Sbjct: 331 ELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRL 390

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+++ A EL+  M  + C+    S NIL++G  +   V+EA    ++M   GI P  
Sbjct: 391 ARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDK 450

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            TY+ L +GL    + + A KL EE+ RD
Sbjct: 451 FTYDKLVVGLCWQGKADQARKLVEELVRD 479



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 85/173 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTYNT+++GL     +  A  L   M  +   P++ TY  LI  LC  +   EA +L
Sbjct: 308 PTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKL 367

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M D+G  PS+  + V++  L + G++D+A  L   M + + +    + + L+DG   
Sbjct: 368 LSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILR 427

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
            G ++ A++    M   G   D  +Y+ L+ G C   + ++A  L  E+V  G
Sbjct: 428 RGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 39/70 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+    + N ++DG+ + G VD+AK    QM    I PD  TY+ L+ GLC     ++A+
Sbjct: 411 CQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQAR 470

Query: 72  RLFFEMMDQG 81
           +L  E++  G
Sbjct: 471 KLVEELVRDG 480


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 197/386 (51%), Gaps = 41/386 (10%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTYNT+IDG CK G +D A  +  +MK +++ P+++T+NSL+ GLC      EA+ L  E
Sbjct: 247 VTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKE 306

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M   G  P   T++++ D L +    + A  L +   ++ +R N +T S L++G C  GK
Sbjct: 307 MEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGK 366

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCK---------------------------- 168
           + +AEE+       G   D+V YN  +NGYC+                            
Sbjct: 367 VEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNS 426

Query: 169 -------NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
                   KE+++A    ++M  KG+ P+V TYNTL  G  ++   +   ++ E+M+   
Sbjct: 427 LIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIG 486

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCKSGRLE 278
           V  +  +Y + I+ LCK+G I+EA  + R +   G+L    + Q YN LIDG C  G+++
Sbjct: 487 VKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLP---NAQVYNMLIDGSCMVGKVK 543

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            AL  F  + R  +   +VTYN++I GLC  G++ +A D    +  +  +P+VI + +LI
Sbjct: 544 DALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLI 603

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMP 364
            G+      SK + L   MK   + P
Sbjct: 604 SGYANAGNVSKCLGLYETMKNLGIKP 629



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 200/394 (50%), Gaps = 36/394 (9%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T + +++GLCK+G V+KA+ +  +     +  D V YN+ ++G C   D N+A    
Sbjct: 350 NNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTI 409

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M   G++P+ +TFN ++D+ C   +MD+A   +  M ++ V P+  TY+TL+DG+   
Sbjct: 410 ERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKL 469

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
              +R  ++   ME +G K + VSY  LIN  CK+ ++ EA  + R+M+ +G+ P    Y
Sbjct: 470 CTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVY 529

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE------- 247
           N L  G   + +V+ AL+ F+EM R +++    TYN  IDGLCK G + EA +       
Sbjct: 530 NMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITS 589

Query: 248 ----------------------------LFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
                                       L+ T+  L  +  ++ Y+ LI G  K G +E+
Sbjct: 590 SGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IEL 648

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
             +L+  + +  L+ D V YN MIH     G   KA+ L   M +  + P+ + + +LI 
Sbjct: 649 VEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLIL 708

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           G  R  K S + +L++ MK K++ P A    ++V
Sbjct: 709 GHFREGKLSNIKDLVNNMKAKELAPKADTYDILV 742



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 203/399 (50%), Gaps = 44/399 (11%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +T+N+++ GLCK   + +A++L  +M+     PD  TY+ L  GL   +D N A  L
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMEL 338

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +  ++G++ +  T +++++ LCK GK+++A  +L    +  +  +   Y+T ++G+C 
Sbjct: 339 YEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCR 398

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +N+A      MES G + + +++N LI+ +C  KE+++A    ++M  KG+ P+V T
Sbjct: 399 IGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVET 458

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           YNTL  G  ++   +   ++ E+M+   V  +  +Y + I+ LCK+G I+EA  + R + 
Sbjct: 459 YNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMI 518

Query: 253 --GIL------------------------------KCELD--IQAYNCLIDGLCKSGRLE 278
             G+L                              + E+   +  YN LIDGLCK G+L 
Sbjct: 519 CRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLT 578

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +    +       DV+TYN +I G  N G + K   L+  M+   + P V  +  LI
Sbjct: 579 EAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLI 638

Query: 339 HGFVRINKPSKVIELLHK----MKEKKVMPDASIVSMVV 373
            G  +     + IEL+ K    M +  ++PD  + + ++
Sbjct: 639 SGCSK-----EGIELVEKLYNEMLQMNLLPDRVVYNAMI 672



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 182/357 (50%), Gaps = 3/357 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN++T+N++ID  C    +DKA+    +M  + + P V TYN+LI G      ++   +
Sbjct: 418 RPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQ 477

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M + GV+P+VV++  +++ LCK+GK+ EA  +L  M+ R V PNA  Y+ L+DG C
Sbjct: 478 ILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSC 537

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + GK+  A   F  M         V+YN+LI+G CK  ++ EA     ++ S G  P V+
Sbjct: 538 MVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVI 597

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE-LFRT 251
           TYN+L  G      V   L L+E M+   +     TY+  I G  K G  +E VE L+  
Sbjct: 598 TYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG--IELVEKLYNE 655

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +    D   YN +I    + G  + A  L + +  + +  D +TYN +I G   +G+
Sbjct: 656 MLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGK 715

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           +    DL  +M+   +AP    +  L+ G   +   S       +M E   +P+ASI
Sbjct: 716 LSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASI 772



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 184/373 (49%), Gaps = 6/373 (1%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
            E GV   P+  TYNT+IDG  K    D+   +  QM+   + P+VV+Y SLI+ LC   
Sbjct: 448 AEKGVT--PSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDG 505

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
              EA+ +  +M+ +GV P+   +N+++D  C  GK+ +A R  D M++ ++ P   TY+
Sbjct: 506 KILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYN 565

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+DG C  GK+  AE+    + S G   D ++YN LI+GY     V + L LY  M + 
Sbjct: 566 VLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNL 625

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           GIKPTV TY+ L  G  +   +E   KL+ EM + ++  D   YN  I    + G   +A
Sbjct: 626 GIKPTVRTYHPLISGCSK-EGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKA 684

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             L + +       D   YN LI G  + G+L    +L  ++  + L     TY+I++ G
Sbjct: 685 YSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKG 744

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM-- 363
            C+      A+  + +M EN   PN  I   L  G  +  +  +V  +  +M  K ++  
Sbjct: 745 HCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGIINH 804

Query: 364 -PDASIVSMVVDL 375
            P    +S V  +
Sbjct: 805 WPSKEEISAVAKM 817



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 153/304 (50%), Gaps = 4/304 (1%)

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF E+ + G +     +   +    K   +      LD M +R VRPN F Y+ L+ G C
Sbjct: 163 LFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLC 222

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +I  AE++F  M ++      V+YN LI+GYCK  E++ A  +   M  K + P ++
Sbjct: 223 REKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNII 282

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL--CKNGYIVEAVELFR 250
           T+N+L  GL ++ +++ A  L +EM+ +    D  TY+   DGL  C +G    A+EL+ 
Sbjct: 283 TFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGN--GAMELYE 340

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
                   ++    + L++GLCK G++E A E+ +      LVAD V YN  ++G C  G
Sbjct: 341 QATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIG 400

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            M+KA      ME   + PN I F +LI  F  + +  K  E + KM EK V P     +
Sbjct: 401 DMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYN 460

Query: 371 MVVD 374
            ++D
Sbjct: 461 TLID 464



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 165/328 (50%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           LF++++      D   Y   I       +          M  +GV+P+V  +NV++  LC
Sbjct: 163 LFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLC 222

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           +  ++ +A ++ D M   ++  +  TY+TL+DG+C  G+++ A ++   M+      + +
Sbjct: 223 REKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNII 282

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           ++N L++G CK ++++EA SL +EM   G  P   TY+ LF GL        A++L+E+ 
Sbjct: 283 TFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQA 342

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
               +  +  T +  ++GLCK G + +A E+ +         D   YN  ++G C+ G +
Sbjct: 343 TEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDM 402

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A+     +    L  + +T+N +I   C+  +MDKA +    M E  V P+V  + TL
Sbjct: 403 NKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTL 462

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPD 365
           I G+ ++    +  ++L +M+E  V P+
Sbjct: 463 IDGYGKLCTFDRCFQILEQMEEIGVKPN 490



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 120/268 (44%), Gaps = 35/268 (13%)

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
           +LF  +E+ G + D   Y   I    K + ++  +     M  +G++P V  YN L  GL
Sbjct: 162 DLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGL 221

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
               ++  A K+F+EM   ++     TYNT IDG CK G +  A ++   +       +I
Sbjct: 222 CREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNI 281

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY---------------------- 299
             +N L+ GLCK  +++ A  L + +     + D  TY                      
Sbjct: 282 ITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQ 341

Query: 300 -------------NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
                        +I+++GLC  G+++KA ++     EN +  + +I+ T ++G+ RI  
Sbjct: 342 ATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGD 401

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +K I  + +M+   + P++   + ++D
Sbjct: 402 MNKAILTIERMESFGLRPNSITFNSLID 429



 Score = 41.2 bits (95), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 61/127 (48%)

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +LF         L I   + L+   CKS  L  A+EL+  + R   +  +V+ +++   L
Sbjct: 92  DLFSCFSACSIPLRITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCL 151

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            N+ Q  K  DLF+++E +    +  ++   I   V++      +E L  M+++ V P+ 
Sbjct: 152 VNEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNV 211

Query: 367 SIVSMVV 373
            I ++++
Sbjct: 212 FIYNVLI 218


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 187/352 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTYN ++ GLC+ G +D+ + L  +M   ++ PD  TY+ L  GL    +      
Sbjct: 261 KPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLS 320

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF E + +GV     T +++++ LCK+GK+ +A ++L+++V   + P    Y+TL++G+C
Sbjct: 321 LFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYC 380

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +  A  +F  M+S   + D ++YN LING CK + V +A  L  EM   G+ P+V 
Sbjct: 381 QVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVE 440

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL        Q+E    +  +MQ+  + +D  ++ + +   CKNG I EAV +   +
Sbjct: 441 TFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDM 500

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  + Q YN +ID   +SG  E A  L   +    + A +VTYN+++ GLC   Q+
Sbjct: 501 IYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQI 560

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           D+A +L   +    + P+V+ + T+I          K +ELL +M +  + P
Sbjct: 561 DEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 612



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 186/357 (52%), Gaps = 2/357 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +YN +I GL + G    A  +F +M    + P+ +TYN++I G     D     RL
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 251

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+  G +P++VT+NV++  LC+ G+MDE   L+D M    + P+ FTYS L DG   
Sbjct: 252 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 311

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG+      LF      G      + +IL+NG CK+ +V +A  +   +V  G+ PT V 
Sbjct: 312 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 371

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G  ++  +  A  +FE+M+   +  D  TYN  I+GLCK   + +A +L   + 
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +  ++ +N LID    +G+LE    +   + ++ + +DV+++  ++   C +G++ 
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +A  +  DM    VAPN  ++ ++I  ++      +   L+ KMK   V   ASIV+
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGV--SASIVT 546



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 181/348 (52%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T + +++GLCK+G V KA+ +   +    + P  V YN+LI+G C   D   A  +F +M
Sbjct: 336 TCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 395

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
             + ++P  +T+N +++ LCK   + +A  L+  M +  V P+  T++TL+D +   G++
Sbjct: 396 KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQL 455

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
            +   +   M+  G K D +S+  ++  +CKN ++ EA+++  +M+ K + P    YN++
Sbjct: 456 EKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSI 515

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
                E    E A  L E+M+   V+A   TYN  + GLC++  I EA EL  TL     
Sbjct: 516 IDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGL 575

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D+ +YN +I   C  G  + ALEL + + +  +   + TY+ ++  L + G++     
Sbjct: 576 RPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMEC 635

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           L+  M    V P+  I+  ++  +VR    SKV  L  +M EK +  D
Sbjct: 636 LYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 182/369 (49%), Gaps = 2/369 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINP-DVVTYNSLIHGLCHAN 65
           +    +P+T  +N ++      G +D A A+  +M + E   P D  +YN +I GL  + 
Sbjct: 149 VAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSG 208

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             ++A ++F EM+D GV P+ +T+N ++D   K G ++   RL D M+    +PN  TY+
Sbjct: 209 KGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYN 268

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+ G C  G+++    L   M S     D  +Y+IL +G  +  E    LSL+ E + K
Sbjct: 269 VLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKK 328

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G+     T + L  GL +  +V  A ++ E +    +   T  YNT I+G C+   +  A
Sbjct: 329 GVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGA 388

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             +F  +       D   YN LI+GLCK   +  A +L   + +  +   V T+N +I  
Sbjct: 389 FCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDA 448

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
               GQ++K   +  DM++  +  +VI F +++  F +  K  + + +L  M  K V P+
Sbjct: 449 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPN 508

Query: 366 ASIVSMVVD 374
           A + + ++D
Sbjct: 509 AQVYNSIID 517



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 143/261 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ +TYN +I+GLCK   V KA+ L ++M+   ++P V T+N+LI     A    +   
Sbjct: 401 RPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFT 460

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M  +G++  V++F  ++   CKNGK+ EA  +LD M+ +DV PNA  Y++++D + 
Sbjct: 461 VLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYI 520

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G   +A  L   M++ G     V+YN+L+ G C++ +++EA  L   + ++G++P VV
Sbjct: 521 ESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 580

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNT+          + AL+L +EM +  +     TY+T +  L   G + +   L++ +
Sbjct: 581 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM 640

Query: 253 GILKCELDIQAYNCLIDGLCK 273
                E     Y  ++D   +
Sbjct: 641 LHKNVEPSSSIYGIMVDAYVR 661



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 139/284 (48%), Gaps = 2/284 (0%)

Query: 84  PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEEL 143
           PS+ + N++++ L   G+  +      L+V    RP+ F ++ ++      G ++ A  +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 144 FGSM-ESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
              M  S G    D  SYN++I G  ++ +  +AL ++ EMV  G+ P  +TYNT+  G 
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
            +   +E   +L ++M  D    +  TYN  + GLC+ G + E   L   +       D 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDG 299

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
             Y+ L DGL ++G     L LF    ++ ++    T +I+++GLC DG++ KA  +   
Sbjct: 300 FTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEM 359

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +    + P  +I+ TLI+G+ ++        +  +MK + + PD
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPD 403



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 94/174 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   YN+IID   + G  ++A  L  +MK   ++  +VTYN L+ GLC ++  +EA+ L
Sbjct: 507 PNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 566

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            + + +QG++P VV++N I+   C  G  D+A  LL  M +  +RP   TY TL+     
Sbjct: 567 IYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALAS 626

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
            G+++  E L+  M     +     Y I+++ Y + +   +  SL +EM  KGI
Sbjct: 627 AGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 107/213 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + +++ +++   CK G + +A A+   M  +++ P+   YNS+I     + D  +A  
Sbjct: 471 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFL 530

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M + GV  S+VT+N+++  LC++ ++DEA  L+  +  + +RP+  +Y+T++   C
Sbjct: 531 LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACC 590

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  ++A EL   M   G +    +Y+ L++       V +   LY++M+ K ++P+  
Sbjct: 591 NKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSS 650

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
            Y  +               L +EM    +A D
Sbjct: 651 IYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 76/141 (53%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTYN ++ GLC+   +D+A+ L   ++ + + PDVV+YN++I   C+  D ++A  L  E
Sbjct: 545 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 604

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M   G++P++ T++ ++  L   G++ +   L   M+ ++V P++  Y  ++D +     
Sbjct: 605 MNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCEN 664

Query: 137 INRAEELFGSMESMGCKHDDV 157
            ++   L   M   G   DD 
Sbjct: 665 DSKVASLKKEMSEKGIAFDDT 685


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 118/362 (32%), Positives = 191/362 (52%), Gaps = 2/362 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  +TYNT+I G CK G + +A  +F  M    + P+V TY  LI GLC      EA + 
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQP 339

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+++  +P+ VT+N+I+++LCK+G + +A  +++LM +R  RP+  TY+ L+ G C 
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399

Query: 134 TGKINRAEELFGSM--ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            G ++ A +L   M  +S     D +SYN LI+G CK   + +AL +Y  +V K      
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR 459

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT N L     +   V  A++L++++    +  ++ TY   IDG CK G +  A  L   
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK 519

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + + + +  +  YNCL+  LCK G L+ A  LF  + R     DVV++NIMI G    G 
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +  A  L + M    ++P++  +  LI+ F+++    + I    KM +    PDA I   
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639

Query: 372 VV 373
           V+
Sbjct: 640 VL 641



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 191/403 (47%), Gaps = 37/403 (9%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C  + VT+  +ID  CK G +D+A     +MK   +  D+V Y SLI G C   + +
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
             K LF E++++G  P  +T+N ++   CK G++ EAS + + M++R VRPN +TY+ L+
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C  GK   A +    M     + + V+YNI+IN  CK+  V +A+ +   M  +  +
Sbjct: 325 DGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS--TYNTFIDGLCKN------- 239
           P  +TYN L  GL     ++ A KL   M +D    D    +YN  I GLCK        
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444

Query: 240 ----------------------------GYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
                                       G + +A+EL++ +   K   +   Y  +IDG 
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           CK+G L +A  L   +    L   V  YN ++  LC +G +D+A  LF +M+ +   P+V
Sbjct: 505 CKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDV 564

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + F  +I G ++         LL  M    + PD    S +++
Sbjct: 565 VSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607



 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 195/362 (53%), Gaps = 2/362 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N   +N ++ GLC+     KA +L  +M+  ++ PDV +YN++I G C   +  +A  L 
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM   G   S+VT+ +++D  CK GKMDEA   L  M    +  +   Y++L+ GFC  
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+++R + LF  +   G     ++YN LI G+CK  +++EA  ++  M+ +G++P V TY
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  GL  + + + AL+    M   D   +  TYN  I+ LCK+G + +AVE+   +  
Sbjct: 321 TGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA--DVVTYNIMIHGLCNDGQM 312
            +   D   YN L+ GLC  G L+ A +L   + +       DV++YN +IHGLC + ++
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A D++  + E   A + +    L++  ++    +K +EL  ++ + K++ ++   + +
Sbjct: 441 HQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAM 500

Query: 373 VD 374
           +D
Sbjct: 501 ID 502



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 183/355 (51%), Gaps = 6/355 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +YNT+I G C+   ++KA  L  +MKG   +  +VT+  LI   C A   +EA   
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G++  +V +  ++   C  G++D    L D +++R   P A TY+TL+ GFC 
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A E+F  M   G + +  +Y  LI+G C   + +EAL     M+ K  +P  VT
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVT 354

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +   L +   V  A+++ E M++     D  TYN  + GLC  G + EA +L   + 
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM- 413

Query: 254 ILK----CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
            LK     + D+ +YN LI GLCK  RL  AL+++  L  ++   D VT NI+++     
Sbjct: 414 -LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G ++KA +L+  + ++ +  N   +  +I GF +    +    LL KM+  ++ P
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 153/294 (52%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+ +G   +V   N+++  LC+N +  +A  LL  M +  + P+ F+Y+T++ GFC   +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           + +A EL   M+  GC    V++ ILI+ +CK  +++EA+   +EM   G++  +V Y +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G  +  +++    LF+E+     +    TYNT I G CK G + EA E+F  +    
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              ++  Y  LIDGLC  G+ + AL+    +  +    + VTYNI+I+ LC DG +  A 
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++   M++    P+ I +  L+ G        +  +LL+ M +     D  ++S
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVIS 426



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 148/307 (48%), Gaps = 1/307 (0%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +F + +D G   +    N +M +L ++   + A      M++ D   N  + S L++
Sbjct: 57  AVSVFQQAVDSGSSLAFAGSN-LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLE 115

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            +    K   A  +   M   G   +  ++NIL+ G C+N E  +A+SL REM    + P
Sbjct: 116 CYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMP 175

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V +YNT+  G  E  ++E AL+L  EM+    +    T+   ID  CK G + EA+   
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + +  +  E D+  Y  LI G C  G L+    LF  +  R      +TYN +I G C  
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           GQ+ +A ++F  M E  V PNV  +  LI G   + K  + ++ L+ M EK   P+A   
Sbjct: 296 GQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTY 355

Query: 370 SMVVDLL 376
           +++++ L
Sbjct: 356 NIIINKL 362



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 157/310 (50%), Gaps = 3/310 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKA-KALFLQMKGEN-INPDVVTYNSLIHGLCHANDWNEA 70
           +P+ +TYN ++ GLC +G +D+A K L+L +K  +  +PDV++YN+LIHGLC  N  ++A
Sbjct: 384 RPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQA 443

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             ++  ++++      VT N++++   K G +++A  L   +    +  N+ TY+ ++DG
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC TG +N A+ L   M     +     YN L++  CK   +++A  L+ EM      P 
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VV++N +  G  +   ++ A  L   M R  ++ D  TY+  I+   K GY+ EA+  F 
Sbjct: 564 VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN-D 309
            +     E D    + ++      G  +   EL + L  + +V D      ++  +CN  
Sbjct: 624 KMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSS 683

Query: 310 GQMDKAHDLF 319
             MD A  L 
Sbjct: 684 ANMDLAKRLL 693



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 149/314 (47%), Gaps = 6/314 (1%)

Query: 55  NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
           ++L+  L  + +   A   + +M++     + V+ + +++   +  K   A  +L LM++
Sbjct: 76  SNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
           R    N + ++ L+ G C   +  +A  L   M       D  SYN +I G+C+ KE+E+
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           AL L  EM   G   ++VT+  L     +  +++ A+   +EM+   + AD   Y + I 
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255

Query: 235 GLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
           G C  G +     LF  +   G   C +    YN LI G CK G+L+ A E+F  +  R 
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAI---TYNTLIRGFCKLGQLKEASEIFEFMIERG 312

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           +  +V TY  +I GLC  G+  +A      M E    PN + +  +I+   +    +  +
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372

Query: 352 ELLHKMKEKKVMPD 365
           E++  MK+++  PD
Sbjct: 373 EIVELMKKRRTRPD 386


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 115/344 (33%), Positives = 185/344 (53%)

Query: 22  IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG 81
           + D L K      A A + ++      PDV  +N L+H LC  +  NEA+ LF E+  +G
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG 255

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
           ++P+VV+FN +++  CK+G +D+  RL   M++  V P+ FTYS L++G C  G+++ A 
Sbjct: 256 LRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDAN 315

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
           +LF  M   G   +DV++  LING+C     +  + +Y++M+ KG+KP V+TYNTL  GL
Sbjct: 316 KLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGL 375

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
            ++  +  A KL  EM +  +  D  TY   IDG CK G +  A+E+ + +     ELD 
Sbjct: 376 CKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDN 435

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
            A+  LI G C+ G++  A    R +    +  D  TY ++IHG C  G +     L  +
Sbjct: 436 VAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKE 495

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           M+ +   P V+ +  L++G  +  +      LL  M    V+PD
Sbjct: 496 MQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPD 539



 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 109/325 (33%), Positives = 183/325 (56%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   +N ++  LCKE  +++A+ LF ++    + P VV++N+LI+G C + + ++  RL
Sbjct: 223 PDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRL 282

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              MM+  V P V T++V+++ LCK G++D+A++L   M  R + PN  T++TL++G C+
Sbjct: 283 KRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCV 342

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG+ +   E++  M   G K D ++YN LING CK  ++ EA  L  EM  +G+KP   T
Sbjct: 343 TGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFT 402

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G  +   +E AL++ +EM ++ +  D   +   I G C+ G ++EA    R + 
Sbjct: 403 YTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREML 462

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D   Y  +I G CK G ++   +L + +     V  VVTYN++++GLC  GQM 
Sbjct: 463 EAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMK 522

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLI 338
            A+ L   M    V P+ I +  L+
Sbjct: 523 NANMLLDAMLNLGVVPDDITYNILL 547



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 164/299 (54%), Gaps = 1/299 (0%)

Query: 6   GEIGVV-CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           GEIG    +P  V++NT+I+G CK G +D+   L   M    + PDV TY+ LI+GLC  
Sbjct: 249 GEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKE 308

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
              ++A +LF EM D+G+ P+ VTF  +++  C  G+ D    +   M+++ V+P+  TY
Sbjct: 309 GQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITY 368

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           +TL++G C  G +  A++L   M   G K D  +Y +LI+G CK  ++E AL + +EMV 
Sbjct: 369 NTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVK 428

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           +GI+   V +  L  G     QV  A +   EM    +  D +TY   I G CK G +  
Sbjct: 429 EGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKT 488

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
             +L + +        +  YN L++GLCK G+++ A  L  ++    +V D +TYNI++
Sbjct: 489 GFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 177/344 (51%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + + ++ +++     G+   A   F  ++  N+     +   L   L   N  + A   +
Sbjct: 154 SNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFY 213

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            E++D G  P V  FNV+M  LCK  K++EA  L   + +R +RP   +++TL++G+C +
Sbjct: 214 EEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKS 273

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +++   L   M       D  +Y++LING CK  ++++A  L+ EM  +G+ P  VT+
Sbjct: 274 GNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTF 333

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            TL  G     + +  ++++++M R  V  D  TYNT I+GLCK G + EA +L   +  
Sbjct: 334 TTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQ 393

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + D   Y  LIDG CK G LE ALE+ + + +  +  D V +  +I G C +GQ+ +
Sbjct: 394 RGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIE 453

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           A     +M E  + P+   +  +IHGF +        +LL +M+
Sbjct: 454 AERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQ 497



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 146/256 (57%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY+ +I+GLCKEG +D A  LFL+M    + P+ VT+ +LI+G C     +    +
Sbjct: 293 PDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEI 352

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +M+ +GV+P V+T+N +++ LCK G + EA +L+  M QR ++P+ FTY+ L+DG C 
Sbjct: 353 YQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCK 412

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A E+   M   G + D+V++  LI+G+C+  +V EA    REM+  GIKP   T
Sbjct: 413 EGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDAT 472

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  +  G  +   V+   KL +EMQ D       TYN  ++GLCK G +  A  L   + 
Sbjct: 473 YTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAML 532

Query: 254 ILKCELDIQAYNCLID 269
            L    D   YN L++
Sbjct: 533 NLGVVPDDITYNILLE 548



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 177/373 (47%), Gaps = 17/373 (4%)

Query: 18  TYNTIIDGLCKEGFVDKAKALF---LQMKGENINPDVVT--------------YNSLIHG 60
           +Y T+   LC    + +A++L    +  KG+N    V T              ++ L++ 
Sbjct: 105 SYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNA 164

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
              +  +++A + F  +    +Q    +   + D L K      A    + ++     P+
Sbjct: 165 YTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPD 224

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
              ++ LM   C   KIN A+ LFG +   G +   VS+N LINGYCK+  +++   L R
Sbjct: 225 VCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKR 284

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            M+   + P V TY+ L  GL +  Q++ A KLF EM    +  +  T+ T I+G C  G
Sbjct: 285 FMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTG 344

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
                +E+++ +     + D+  YN LI+GLCK G L  A +L   + +R L  D  TY 
Sbjct: 345 RADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYT 404

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           ++I G C +G ++ A ++  +M +  +  + + F  LI GF R  +  +    L +M E 
Sbjct: 405 MLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEA 464

Query: 361 KVMPDASIVSMVV 373
            + PD +  +MV+
Sbjct: 465 GIKPDDATYTMVI 477



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 161/346 (46%), Gaps = 29/346 (8%)

Query: 46  NINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA 105
           N+NP  ++  SL+        W   +  F        + S+ ++  +   LC +  + EA
Sbjct: 75  NLNPHSLSPPSLLSFF----KWLSTQHHF--------RLSIHSYCTMTHFLCTHKMLSEA 122

Query: 106 SRLLDLMVQRDVRPNA---FT--------------YSTLMDGFCLTGKINRAEELFGSME 148
             LL  +V R  + +A   FT              +S LM+ +  +G  + A + F  + 
Sbjct: 123 QSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVR 182

Query: 149 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 208
               +    S   L +   K      A + Y E++  G  P V  +N L   L + H++ 
Sbjct: 183 KHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKIN 242

Query: 209 HALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLI 268
            A  LF E+ +  +     ++NT I+G CK+G + +   L R +   +   D+  Y+ LI
Sbjct: 243 EAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLI 302

Query: 269 DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVA 328
           +GLCK G+L+ A +LF  +  R LV + VT+  +I+G C  G+ D   +++  M    V 
Sbjct: 303 NGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVK 362

Query: 329 PNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           P+VI + TLI+G  ++    +  +L+ +M ++ + PD    +M++D
Sbjct: 363 PDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLID 408



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 2/95 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E G+  KP+  TY  +I G CK+G V     L  +M+ +   P VVTYN L++GLC    
Sbjct: 463 EAGI--KPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQ 520

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
              A  L   M++ GV P  +T+N++++   +  K
Sbjct: 521 MKNANMLLDAMLNLGVVPDDITYNILLERTLQAWK 555


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 181/355 (50%), Gaps = 1/355 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN V Y  +IDGL K G ++     F  M G +  P   TY  +I GLC A    +A 
Sbjct: 394 CSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDAC 453

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++F +M+ +G  P  +T+  ++D   K  KMDEA +LLD+M+ +   P A TY +++ GF
Sbjct: 454 KVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGF 513

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    IN A+E+   M   GC+     +  L++ Y      EEA  +  EM ++G  P V
Sbjct: 514 CKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDV 573

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           + Y +L   LF   +V  A  +F+ M     A D  TY T I    K G +  A E+   
Sbjct: 574 ILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILEL 633

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D  AYN L+DG  K  R++ A  ++  +    +  + VT+N+++HGL  DG+
Sbjct: 634 MAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGK 693

Query: 312 MDKAHDLFLDM-EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            D+A  LF +M E++ V P ++ +  LI G  +  + S+      +M ++ ++P+
Sbjct: 694 TDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPE 748



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 189/362 (52%), Gaps = 6/362 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+   Y  +ID LCK G VD+A  LF +M+      D VT+ +LI  L +    +EA 
Sbjct: 155 CIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEAC 214

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L+ EM+++G +P +   + ++  LCK GK+DEA+ +   +V + V  +   Y++LMDG+
Sbjct: 215 ELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGY 274

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++   +L   M       D  +YNIL+ G+ +   +++AL L++ + S G KP  
Sbjct: 275 CKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNA 334

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY T+  GL++  ++E A   F+E      A D  +Y T I GL  +  I EA ELF  
Sbjct: 335 ATYTTIIQGLYDAQRMEEAKAFFDE------ALDVISYTTVIKGLADSKRIDEACELFEK 388

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L    C  ++ AY  +IDGL K+GR+E  L+ F  +     V    TY ++I GLC    
Sbjct: 389 LKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQM 448

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +  A  +F  M +    P+ I + TLI GF + +K  +  +LL  M  K   P A     
Sbjct: 449 LPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGS 508

Query: 372 VV 373
           +V
Sbjct: 509 IV 510



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 183/369 (49%), Gaps = 42/369 (11%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+T+TY T+IDG  K   +D+A+ L   M  +   P  VTY S++HG C  +  NEAK
Sbjct: 464 CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAK 523

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  +M ++G +P +  F  ++      G+ +EA ++L  M  R   P+   Y++L+D  
Sbjct: 524 EVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLL 583

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSY-------------------------------- 159
             TG++  A  +F SM   GC  D ++Y                                
Sbjct: 584 FSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDC 643

Query: 160 ---NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
              N L++GY K + V++A  +Y  MV+ GIKP  VT+N L  GLF+  + + A  LF+E
Sbjct: 644 FAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKE 703

Query: 217 M-QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLC 272
           M ++D+V     +Y   IDGL K G + EA   F+ +   GI+    +   Y  LI  L 
Sbjct: 704 MLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIP---ECHTYTSLIYSLA 760

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           K+GR+  A +L   + +  +  DV  Y+ +I GL +   +D A D+F +M +   APN +
Sbjct: 761 KAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEV 820

Query: 333 IFVTLIHGF 341
            +  L  GF
Sbjct: 821 TYKVLRRGF 829



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 196/399 (49%), Gaps = 44/399 (11%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V  N +++GLCK   +DKA  LFL+M      P +V+YN++I GL   +  +EA + 
Sbjct: 18  PDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKF 77

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGK-------------------------------- 101
           F  M+D G +P V+ F  ++   CK G+                                
Sbjct: 78  FNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKA 137

Query: 102 --MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
             +D   ++L+ M+     P+A  Y  L+D  C  G+++ A ELF  M   GC  D V++
Sbjct: 138 GDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTF 197

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
             LI     + +++EA  LYREM+ +G +P +   ++L   L +  +V+ A ++++ +  
Sbjct: 198 MTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVA 257

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE--LDIQAYNCLIDGLCKSGRL 277
             VA     YN+ +DG CK G + + ++L   L +++C+   DIQ YN L+ G  ++ RL
Sbjct: 258 KKVATSRVAYNSLMDGYCKLGRVDDGLKLL--LQMVECDNFPDIQTYNILVAGFSRANRL 315

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + ALELF+ L       +  TY  +I GL +  +M++A   F +      A +VI + T+
Sbjct: 316 DDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE------ALDVISYTTV 369

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           I G     +  +  EL  K+K     P+    + V+D L
Sbjct: 370 IKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGL 408



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 175/343 (51%), Gaps = 15/343 (4%)

Query: 41  QMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
           +M    + PDVV  N +++GLC A   ++A  LF EM   G +P++V++N ++  L    
Sbjct: 10  EMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASID 69

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK-------INRAEELFGSMESMGCK 153
           KMDEA +  + M+     P+   ++TL+ GFC  G+       +N+A + F        +
Sbjct: 70  KMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF--------R 121

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            D   Y  +I+GYCK  +++    +  EM++ G  P    Y  L   L ++ +V+ A +L
Sbjct: 122 PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYEL 181

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
           FE M++     D  T+ T I+ L  +G + EA EL+R +     E  ++  + LI  LCK
Sbjct: 182 FERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCK 241

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           +G+++ A E+++++  + +    V YN ++ G C  G++D    L L M E    P++  
Sbjct: 242 AGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQT 301

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +  L+ GF R N+    +EL   +      P+A+  + ++  L
Sbjct: 302 YNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGL 344



 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 175/355 (49%), Gaps = 6/355 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN  TY TII GL     +++AKA F +        DV++Y ++I GL  +   +EA 
Sbjct: 330 CKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKRIDEAC 383

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF ++   G  P+VV +  ++D L K G++++  +  + M      P   TY+ ++DG 
Sbjct: 384 ELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGL 443

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    +  A ++F  M   GC  D ++Y  LI+G+ K  +++EA  L   M++KG +PT 
Sbjct: 444 CKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTA 503

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY ++  G  ++  +  A ++  +M+          + + +      G   EA ++   
Sbjct: 504 VTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTE 563

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  D+  Y  LID L  +GR+  A  +F S+  +    D +TY  +I      G 
Sbjct: 564 MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGN 623

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           ++ A ++   M ++ V P+   + +L+ G+V++ +  +   +  +M    + P+A
Sbjct: 624 VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNA 678



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 166/361 (45%), Gaps = 6/361 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN ++ G  +   +D A  LF  +      P+  TY ++I GL  A    EAK  
Sbjct: 297 PDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAF 356

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E +D      V+++  ++  L  + ++DEA  L + +      PN   Y+ ++DG   
Sbjct: 357 FDEALD------VISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLK 410

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+I    + F  M    C     +Y ++I+G CK + + +A  ++ +MV KG  P  +T
Sbjct: 411 AGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTIT 470

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G  +  +++ A KL + M          TY + + G CK   I EA E+   + 
Sbjct: 471 YTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR 530

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              CE  +  +  L+      GR E A ++   +  R    DV+ Y  +I  L + G++ 
Sbjct: 531 ERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVP 590

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  +F  M E   AP+ + + T+I  F +I       E+L  M +  V PD    + ++
Sbjct: 591 EARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLM 650

Query: 374 D 374
           D
Sbjct: 651 D 651



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 152/305 (49%), Gaps = 1/305 (0%)

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA     EM   G+ P VV  N++++ LCK  K+D+A  L   M      P   +Y+T++
Sbjct: 3   EALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVI 62

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G     K++ A + F SM   GC+ D +++  LI+G+CK  + +    L  + + K  +
Sbjct: 63  SGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQAL-KRFR 121

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P V  Y ++  G  +   ++   K+ EEM       D + Y   ID LCK G + EA EL
Sbjct: 122 PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYEL 181

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +    C  D   +  LI+ L   G+L+ A EL+R +  R     +   + +I  LC 
Sbjct: 182 FERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCK 241

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G++D+A++++  +    VA + + + +L+ G+ ++ +    ++LL +M E    PD   
Sbjct: 242 AGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQT 301

Query: 369 VSMVV 373
            +++V
Sbjct: 302 YNILV 306



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 129/266 (48%), Gaps = 1/266 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ + Y ++ID L   G V +A+ +F  M  +   PD +TY ++I       +   A 
Sbjct: 569 CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAG 628

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   M   GV P    +N +MD   K  ++D+A  + D MV   ++PNA T++ LM G 
Sbjct: 629 EILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGL 688

Query: 132 CLTGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
              GK +RA  LF  M E        VSY ILI+G  K   V EA S ++EM+ +GI P 
Sbjct: 689 FKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPE 748

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             TY +L   L +  ++  A KL E+M +  V  D   Y+  I GL  +  +  A ++F+
Sbjct: 749 CHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQ 808

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGR 276
            +    C  +   Y  L  G   +GR
Sbjct: 809 EMMKRGCAPNEVTYKVLRRGFRAAGR 834



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 132/263 (50%), Gaps = 5/263 (1%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           M+EA   L  M    + P+    + +++G C   KI++A ELF  M SMGC+   VSYN 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI--HQVEHALKLFEEMQR 219
           +I+G     +++EA   +  M+  G +P V+ + TL  G  +    QV H L L + ++R
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHML-LNQALKR 119

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
                D   Y + I G CK G +    ++   +    C  D  AY  LID LCK GR++ 
Sbjct: 120 --FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDE 177

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A ELF  + +   + D VT+  +I  L N G++D+A +L+ +M E    P + +  +LI 
Sbjct: 178 AYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIF 237

Query: 340 GFVRINKPSKVIELLHKMKEKKV 362
              +  K  +  E+   +  KKV
Sbjct: 238 ALCKAGKVDEANEIYQTVVAKKV 260



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 1/194 (0%)

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           +EEAL   +EM + G+ P VV  N +  GL +  +++ A++LF EM          +YNT
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            I GL     + EA + F ++    CE D+ A+  LI G CK+G+ ++   L     +R 
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR- 119

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
              DV  Y  +IHG C  G +D    +  +M      P+   +  LI    ++ +  +  
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 352 ELLHKMKEKKVMPD 365
           EL  +M++   + D
Sbjct: 180 ELFERMRKSGCLGD 193


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 115/344 (33%), Positives = 185/344 (53%)

Query: 22  IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG 81
           + D L K      A A + ++      PDV  +N L+H LC  +  NEA+ LF E+  +G
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG 255

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
           ++P+VV+FN +++  CK+G +D+  RL   M++  V P+ FTYS L++G C  G+++ A 
Sbjct: 256 LRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDAN 315

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
           +LF  M   G   +DV++  LING+C     +  + +Y++M+ KG+KP V+TYNTL  GL
Sbjct: 316 KLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGL 375

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
            ++  +  A KL  EM +  +  D  TY   IDG CK G +  A+E+ + +     ELD 
Sbjct: 376 CKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDN 435

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
            A+  LI G C+ G++  A    R +    +  D  TY ++IHG C  G +     L  +
Sbjct: 436 VAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKE 495

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           M+ +   P V+ +  L++G  +  +      LL  M    V+PD
Sbjct: 496 MQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPD 539



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 198/363 (54%), Gaps = 4/363 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   +N ++  LCKE  +++A+ LF ++    + P VV++N+LI+G C + + ++  RL
Sbjct: 223 PDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRL 282

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              MM+  V P V T++V+++ LCK G++D+A++L   M  R + PN  T++TL++G C+
Sbjct: 283 KRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCV 342

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG+ +   E++  M   G K D ++YN LING CK  ++ EA  L  EM  +G+KP   T
Sbjct: 343 TGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFT 402

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G  +   +E AL++ +EM ++ +  D   +   I G C+ G ++EA    R + 
Sbjct: 403 YTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREML 462

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D   Y  +I G CK G ++   +L + +     V  VVTYN++++GLC  GQM 
Sbjct: 463 EAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMK 522

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD-ASIVSMV 372
            A+ L   M    V P+ I +  L+ G  +        +L     EK ++ D  S  S++
Sbjct: 523 NANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKL---QSEKGLVQDYGSYTSLI 579

Query: 373 VDL 375
            DL
Sbjct: 580 GDL 582



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 168/309 (54%), Gaps = 1/309 (0%)

Query: 6   GEIGVV-CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           GEIG    +P  V++NT+I+G CK G +D+   L   M    + PDV TY+ LI+GLC  
Sbjct: 249 GEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKE 308

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
              ++A +LF EM D+G+ P+ VTF  +++  C  G+ D    +   M+++ V+P+  TY
Sbjct: 309 GQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITY 368

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           +TL++G C  G +  A++L   M   G K D  +Y +LI+G CK  ++E AL + +EMV 
Sbjct: 369 NTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVK 428

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           +GI+   V +  L  G     QV  A +   EM    +  D +TY   I G CK G +  
Sbjct: 429 EGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKT 488

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
             +L + +        +  YN L++GLCK G+++ A  L  ++    +V D +TYNI++ 
Sbjct: 489 GFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLE 548

Query: 305 GLCNDGQMD 313
           G C  G  +
Sbjct: 549 GHCKHGNRE 557



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 177/344 (51%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + + ++ +++     G+   A   F  ++  N+     +   L   L   N  + A   +
Sbjct: 154 SNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFY 213

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            E++D G  P V  FNV+M  LCK  K++EA  L   + +R +RP   +++TL++G+C +
Sbjct: 214 EEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKS 273

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +++   L   M       D  +Y++LING CK  ++++A  L+ EM  +G+ P  VT+
Sbjct: 274 GNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTF 333

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            TL  G     + +  ++++++M R  V  D  TYNT I+GLCK G + EA +L   +  
Sbjct: 334 TTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQ 393

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + D   Y  LIDG CK G LE ALE+ + + +  +  D V +  +I G C +GQ+ +
Sbjct: 394 RGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIE 453

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           A     +M E  + P+   +  +IHGF +        +LL +M+
Sbjct: 454 AERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQ 497



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 177/373 (47%), Gaps = 17/373 (4%)

Query: 18  TYNTIIDGLCKEGFVDKAKALF---LQMKGENINPDVVT--------------YNSLIHG 60
           +Y T+   LC    + +A++L    +  KG+N    V T              ++ L++ 
Sbjct: 105 SYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNA 164

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
              +  +++A + F  +    +Q    +   + D L K      A    + ++     P+
Sbjct: 165 YTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPD 224

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
              ++ LM   C   KIN A+ LFG +   G +   VS+N LINGYCK+  +++   L R
Sbjct: 225 VCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKR 284

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            M+   + P V TY+ L  GL +  Q++ A KLF EM    +  +  T+ T I+G C  G
Sbjct: 285 FMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTG 344

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
                +E+++ +     + D+  YN LI+GLCK G L  A +L   + +R L  D  TY 
Sbjct: 345 RADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYT 404

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           ++I G C +G ++ A ++  +M +  +  + + F  LI GF R  +  +    L +M E 
Sbjct: 405 MLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEA 464

Query: 361 KVMPDASIVSMVV 373
            + PD +  +MV+
Sbjct: 465 GIKPDDATYTMVI 477



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 161/346 (46%), Gaps = 29/346 (8%)

Query: 46  NINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA 105
           N+NP  ++  SL+        W   +  F        + S+ ++  +   LC +  + EA
Sbjct: 75  NLNPHSLSPPSLLSFF----KWLSTQHHF--------RLSIHSYCTMTHFLCTHKMLSEA 122

Query: 106 SRLLDLMVQRDVRPNA---FT--------------YSTLMDGFCLTGKINRAEELFGSME 148
             LL  +V R  + +A   FT              +S LM+ +  +G  + A + F  + 
Sbjct: 123 QSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVR 182

Query: 149 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 208
               +    S   L +   K      A + Y E++  G  P V  +N L   L + H++ 
Sbjct: 183 KHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKIN 242

Query: 209 HALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLI 268
            A  LF E+ +  +     ++NT I+G CK+G + +   L R +   +   D+  Y+ LI
Sbjct: 243 EAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLI 302

Query: 269 DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVA 328
           +GLCK G+L+ A +LF  +  R LV + VT+  +I+G C  G+ D   +++  M    V 
Sbjct: 303 NGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVK 362

Query: 329 PNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           P+VI + TLI+G  ++    +  +L+ +M ++ + PD    +M++D
Sbjct: 363 PDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLID 408



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 3/185 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY  +IDG CKEG ++ A  +  +M  E I  D V + +LI G C      EA+R
Sbjct: 397 KPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAER 456

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              EM++ G++P   T+ +++   CK G +    +LL  M      P   TY+ L++G C
Sbjct: 457 TLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLC 516

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A  L  +M ++G   DD++YNIL+ G+CK+   E+   L  E   KG+     
Sbjct: 517 KQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSE---KGLVQDYG 573

Query: 193 TYNTL 197
           +Y +L
Sbjct: 574 SYTSL 578


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  211 bits (536), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/376 (33%), Positives = 190/376 (50%), Gaps = 19/376 (5%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+GVV   N V        LC  G  +KA  +  +M  +   PD  TY+ +I  LC+A+ 
Sbjct: 80  EMGVVL--NKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASK 137

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A +LF EM   G+ P V T+  ++D  CK G +++A    D M Q    PN  TY+ 
Sbjct: 138 VEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTA 197

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+  +  T K++RA E+F  M S GC  + V+Y  LI+G+CK  E E+A  +Y  M +  
Sbjct: 198 LIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDK 257

Query: 187 I-----------------KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
           +                 +P VVTY  L  GL + H+V+ A  L E M  +    +   Y
Sbjct: 258 VDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIY 317

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           +  IDG CK G + EA E+F  +    C  ++  Y+ LID L K  RL++AL++   +  
Sbjct: 318 DALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLE 377

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
                +VV Y  M+ GLC  G+ D+A+ L L MEE    PNV+ +  +I GF +  +  +
Sbjct: 378 NSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDR 437

Query: 350 VIELLHKMKEKKVMPD 365
            +ELL  M  K   P+
Sbjct: 438 CLELLQLMTSKGCAPN 453



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 193/421 (45%), Gaps = 58/421 (13%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND----- 66
           C P+ + +N+++   C+ G    A  L  +M      P  V YN LI G+C   D     
Sbjct: 7   CYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSME 66

Query: 67  --------WNE----------------------------AKRLFFEMMDQGVQPSVVTFN 90
                   +NE                            A  +  EMM +G  P   T++
Sbjct: 67  VIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYS 126

Query: 91  VIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
            ++  LC   K+++A +L   M +  + P+ +TY+TL+D FC  G I +A   F  M+  
Sbjct: 127 KVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQD 186

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           GC  + V+Y  LI+ Y K +++  A  ++  M+S G  P +VTY  L  G  +  + E A
Sbjct: 187 GCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKA 246

Query: 211 LKLFEEMQRDDV-----------------AADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            +++  M+ D V                   +  TY   +DGLCK   + EA +L  T+ 
Sbjct: 247 CQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMS 306

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +  CE +   Y+ LIDG CK G+L+ A E+F  +       +V TY+ +I  L  D ++D
Sbjct: 307 LEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLD 366

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  +   M EN+ APNV+I+  ++ G  ++ K  +   L+  M+EK   P+    + ++
Sbjct: 367 LALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMI 426

Query: 374 D 374
           D
Sbjct: 427 D 427



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 194/412 (47%), Gaps = 50/412 (12%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY T++D  CK G +++A+  F +M+ +   P+VVTY +LIH        + A  +
Sbjct: 155 PDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEI 214

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV---------------- 117
           F  M+  G  P++VT+  ++D  CK G+ ++A ++   M    V                
Sbjct: 215 FEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSEL 274

Query: 118 -RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
             PN  TY  L+DG C   K+  A +L  +M   GC+ + + Y+ LI+G+CK  +++EA 
Sbjct: 275 KEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQ 334

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            ++ +M+  G  P V TY++L   LF+  +++ ALK+  +M  +  A +   Y   +DGL
Sbjct: 335 EVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGL 394

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           CK G   EA  L   +    C  ++  Y  +IDG  K+GR++  LEL + +  +    + 
Sbjct: 395 CKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNF 454

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDME--------------------------------- 323
           +TY ++I+  C  G +D AH L  +M+                                 
Sbjct: 455 ITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELS 514

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
           E+   P + ++  LI  F++  +    +EL  ++         + VS++  L
Sbjct: 515 EDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQNTYVSLIESL 566



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/348 (32%), Positives = 175/348 (50%), Gaps = 17/348 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY  ++DGLCK   V +A+ L   M  E   P+ + Y++LI G C     +EA+ 
Sbjct: 276 EPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQE 335

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +M+  G  P+V T++ ++D+L K+ ++D A ++L  M++    PN   Y+ ++DG C
Sbjct: 336 VFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLC 395

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK + A  L   ME  GC  + V+Y  +I+G+ K   V+  L L + M SKG  P  +
Sbjct: 396 KVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFI 455

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L         ++ A KL EEM++         Y   I+G         + E   +L
Sbjct: 456 TYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF--------SHEFVASL 507

Query: 253 GILKCELD-------IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           G+L  EL        +  Y  LID   K+GRLE+ALEL   L      A   TY  +I  
Sbjct: 508 GLLA-ELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEEL-SSFSAAYQNTYVSLIES 565

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
           L    ++DKA  L+ DM      P + + V LI G +R+ K  + ++L
Sbjct: 566 LTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQL 613



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 159/358 (44%), Gaps = 23/358 (6%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           M  E   P  + +NSL+H  C + D+  A +L  +M+  G QP  V +N+++  +C    
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 102 MDE------ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHD 155
           +        A R  + M++  V  N           C  GK  +A  +   M S G   D
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
             +Y+ +I   C   +VE+A  L++EM   GI P V TY TL     ++  +E A   F+
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
           EMQ+D  A +  TY   I    K   +  A E+F  +    C  +I  Y  LIDG CK+G
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241

Query: 276 RLEIALEL-----------------FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
             E A ++                 FR +   +   +VVTY  ++ GLC   ++ +A DL
Sbjct: 242 ETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDL 301

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              M      PN II+  LI GF ++ K  +  E+  KM      P+    S ++D L
Sbjct: 302 LETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKL 359



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 3/280 (1%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G  C PN  TY+++ID L K+  +D A  +  +M   +  P+VV Y  ++ GLC     
Sbjct: 341 LGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKT 400

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +EA RL   M ++G  P+VVT+  ++D   K G++D    LL LM  +   PN  TY  L
Sbjct: 401 DEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVL 460

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++  C  G ++ A +L   M+          Y  +I G+  + E   +L L  E+   G 
Sbjct: 461 INHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF--SHEFVASLGLLAELSEDGS 518

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P +  Y  L     +  ++E AL+L EE+     AA  +TY + I+ L     + +A +
Sbjct: 519 VPILPVYKLLIDNFIKAGRLEMALELHEELSSFS-AAYQNTYVSLIESLTLACKVDKAFK 577

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           L+  +       ++    CLI GL + G+ E AL+L  S+
Sbjct: 578 LYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSI 617



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 136/322 (42%), Gaps = 58/322 (18%)

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
           +M+     P+   +++L+  +C +G    A +L   M   G +   V YNILI G C  +
Sbjct: 1   MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTE 60

Query: 171 EV-----------------------------------------EEALSLYREMVSKGIKP 189
           ++                                         E+A ++ REM+SKG  P
Sbjct: 61  DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
              TY+ +   L    +VE A +LF+EM+R+ +  D  TY T +D  CK G I +A   F
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +    C  ++  Y  LI    K+ +L  A E+F  +     V ++VTY  +I G C  
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKA 240

Query: 310 GQMDKAHDLFLDMEENAV-----------------APNVIIFVTLIHGFVRINKPSKVIE 352
           G+ +KA  ++  M+ + V                  PNV+ +  L+ G  + +K  +  +
Sbjct: 241 GETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARD 300

Query: 353 LLHKMKEKKVMPDASIVSMVVD 374
           LL  M  +   P+  I   ++D
Sbjct: 301 LLETMSLEGCEPNQIIYDALID 322


>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 116/355 (32%), Positives = 186/355 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+    N  I  LCK+  +  A  +  +M+ +  +PDVVTY +++ GLC    + EA 
Sbjct: 259 CSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAI 318

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L+ EM+ + ++P V +   ++  LCKN K+DEA  L   M+  D+  +   Y+ L+ GF
Sbjct: 319 GLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGF 378

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G I++A ++   M + GC+ D V+YNIL+N YC    +E+A  L R+M + G+ P  
Sbjct: 379 WRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDR 438

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +YN L  GL + HQ++ A     +        DT + N  ID  CK   +  A+ELF+ 
Sbjct: 439 YSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKE 498

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +G    + D   Y  LI+GL   G   +A ELF  +    +  +V  YNIM+H LC  G 
Sbjct: 499 MGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGH 558

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             +A  +F  M +  V+P+ + F TLI+   + ++  + + L   M+ + V PD 
Sbjct: 559 FKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDT 613



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 186/363 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY T++ GLC      +A  L+ +M   ++ PDV +  +LI GLC  N  +EA  L
Sbjct: 296 PDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFEL 355

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+   ++ SV  +N ++    + G +D+A +++  M      P+  TY+ L++ +C 
Sbjct: 356 ASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCT 415

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G + +AE+L   ME+ G   D  SYN L+ G CK  ++++A +   + +  G     V+
Sbjct: 416 IGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVS 475

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            N L     +  +V+ AL+LF+EM    + AD  TY T I+GL   GY   A ELF  + 
Sbjct: 476 CNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQML 535

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             + + ++  YN ++  LCK G  + A  +F  + ++ +  D VT+N +I+ L    +  
Sbjct: 536 NAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAI 595

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A +LF DM    V P+ + F  LI G +   K +   E+   M E  ++ D  +   ++
Sbjct: 596 EALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGIILDREVSERLI 655

Query: 374 DLL 376
            +L
Sbjct: 656 SVL 658



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 169/315 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  +   +I GLCK   VD+A  L  +M   +I   V  YN+LI G   A   ++A +
Sbjct: 330 KPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYK 389

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M   G +P +VT+N++++  C  G M++A +L+  M    V P+ ++Y+ L+ G C
Sbjct: 390 IISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLC 449

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            T ++++A         +G   D VS NILI+ +CK K+V+ AL L++EM  KG++   V
Sbjct: 450 KTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAV 509

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  GLF +     A +LFE+M    +  + + YN  +  LCK G+   A  +F  +
Sbjct: 510 TYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHM 569

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   D   +N LI  L K  R   AL LF+ +  R +  D +T+  +I GL ++G+ 
Sbjct: 570 IQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKS 629

Query: 313 DKAHDLFLDMEENAV 327
             A++++  M EN +
Sbjct: 630 TLAYEVWEYMMENGI 644



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 157/334 (47%)

Query: 41  QMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
           ++K + +      Y  L+ G   A  ++     F EM+  G +   V +N  +  L KN 
Sbjct: 148 RVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNC 207

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
             D   +  D+ + +      FTYS  +   C + +I   +EL   M+ +GC  D  + N
Sbjct: 208 CFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACN 267

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           I I   CK   + +AL +  +M +KG  P VVTY T+  GL +  +   A+ L+EEM + 
Sbjct: 268 IYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKR 327

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
           D+  D  +    I GLCKN  + EA EL   +  L  EL +  YN LI G  ++G ++ A
Sbjct: 328 DLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKA 387

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            ++   +       D+VTYNI+++  C  G M+KA  L   ME + V P+   +  L+ G
Sbjct: 388 YKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKG 447

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             + ++  K    +    E     D    ++++D
Sbjct: 448 LCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILID 481



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 155/370 (41%), Gaps = 17/370 (4%)

Query: 2   ANGNGEIGVVCKPNTVTYNTII-----DGLCKEGFVDKAKALFLQMKGENINPDVVTYNS 56
            N  G +  + +P  +  + II       +C E  V        +++  ++  D +  N 
Sbjct: 44  TNSPGRLSELFRPVRMDISGIILQALERSMCSEPLV--------ELERLDVELDPIVVNL 95

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           ++ GL   +D   A R ++    + G   S      ++  L  +G     S  L  +  +
Sbjct: 96  VVRGL---SDSETAVRFYWWAESRPGFDHSQFAIAYLVSLLFMDGNFALLSEFLGRVKSQ 152

Query: 116 DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
            V  +   Y  L+ G+   GK +   E F  M   GC+   V YN  I    KN   +  
Sbjct: 153 GVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNCCFDLV 212

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
              Y   ++KG   T  TY+     L + +++E   +L  +M +   + D    N +I  
Sbjct: 213 EKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYY 272

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           LCK   + +A+++   +       D+  Y  ++ GLC + +   A+ L+  + +R L  D
Sbjct: 273 LCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPD 332

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           V +   +I GLC + ++D+A +L   M    +  +V I+  LI GF R     K  +++ 
Sbjct: 333 VFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIIS 392

Query: 356 KMKEKKVMPD 365
            M+     PD
Sbjct: 393 FMRTNGCEPD 402


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 181/355 (50%), Gaps = 1/355 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN V Y  +IDGL K G ++     F +M G +  P   TY  +I GLC A    +A 
Sbjct: 139 CSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDAC 198

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++F +M+ +G  P  +T+  ++D   K  KMDEA +LLD+M+ +   P A TY +++ GF
Sbjct: 199 KVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGF 258

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    IN A+E+   M   GC+     +  L++ Y      EEA  +  EM ++G  P V
Sbjct: 259 CKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDV 318

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           + Y +L   LF   +V  A  +F+ M     A D  TY T I    K G +  A E+   
Sbjct: 319 ILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILEL 378

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D  AYN L+DG  K  R++ A  ++  +    +  + VT+N+++HGL  DG+
Sbjct: 379 MAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGK 438

Query: 312 MDKAHDLFLDM-EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            D+A  LF +M E+  V P ++ +  LI G  +  + S+      +M ++ ++P+
Sbjct: 439 TDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPE 493



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 183/369 (49%), Gaps = 42/369 (11%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+T+TY T+IDG  K   +D+A+ L   M  +   P  VTY S++HG C  +  NEAK
Sbjct: 209 CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAK 268

Query: 72  RLFFEMMDQGVQPS-----------------------------------VVTFNVIMDEL 96
            +  +M ++G +P                                    V+ +  ++D L
Sbjct: 269 EVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLL 328

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
              G++ EA  + D M+++   P+A TY T++  F   G +  A E+   M   G   D 
Sbjct: 329 FSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDC 388

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            +YN L++GY K + V++A  +Y  MV+ GIKP  VT+N L  GLF+  + + A  LF+E
Sbjct: 389 FAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKE 448

Query: 217 M-QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLC 272
           M ++++V     +Y   IDGL K G + EA   F+ +   GI+    +   Y  LI  L 
Sbjct: 449 MLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIP---ECHTYTSLIYSLA 505

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           K+GR+  A +L   + +  +  DV  Y+ +I GL +   +D A D+F +M +   APN +
Sbjct: 506 KAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEV 565

Query: 333 IFVTLIHGF 341
            +  L  GF
Sbjct: 566 TYKVLRRGF 574



 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 169/330 (51%), Gaps = 8/330 (2%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P +V+YN++I GL   +  +EA + F  M+D G +P V+ F  ++   CK G+     +L
Sbjct: 5   PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH--DDVSYNILINGY 166
           L+  ++R  RP+ F Y++++ G+C  G ++      G   ++  K   D +SY  +I G 
Sbjct: 65  LNQALKR-FRPDVFLYTSVIHGYCKAGDLDT-----GYFRAVTPKASLDVISYTTVIKGL 118

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
             +K ++EA  L+ E+ + G  P VV Y  +  GL +  ++E  LK FEEM         
Sbjct: 119 ADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTR 178

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
           +TY   IDGLCK   + +A ++F  +    C  D   Y  LIDG  K+ +++ A +L   
Sbjct: 179 TTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDV 238

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +  +      VTY  ++HG C    +++A ++   M E    P + IF +L+  ++   +
Sbjct: 239 MLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGR 298

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +  ++L +M  +   PD  + + ++DLL
Sbjct: 299 AEEAYQVLTEMTARGCAPDVILYTSLIDLL 328



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 162/354 (45%), Gaps = 4/354 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ + + T+I G CK G       L  Q   +   PDV  Y S+IHG C A D +   
Sbjct: 38  CEPDVIAFTTLIHGFCKAGQPQVGHKLLNQAL-KRFRPDVFLYTSVIHGYCKAGDLDTG- 95

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             +F  +       V+++  ++  L  + ++DEA  L + +      PN   Y+ ++DG 
Sbjct: 96  --YFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGL 153

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+I    + F  M    C     +Y ++I+G CK + + +A  ++ +MV KG  P  
Sbjct: 154 LKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDT 213

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY TL  G  +  +++ A KL + M          TY + + G CK   I EA E+   
Sbjct: 214 ITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQ 273

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    CE  +  +  L+      GR E A ++   +  R    DV+ Y  +I  L + G+
Sbjct: 274 MRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGR 333

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + +A  +F  M E   AP+ + + T+I  F +I       E+L  M +  V PD
Sbjct: 334 VPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPD 387



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 172/354 (48%), Gaps = 3/354 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+   Y ++I G CK G +D     + +      + DV++Y ++I GL  +   +EA  
Sbjct: 73  RPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTVIKGLADSKRIDEACE 129

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF E+   G  P+VV +  ++D L K G++++  +  + M      P   TY+ ++DG C
Sbjct: 130 LFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLC 189

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +  A ++F  M   GC  D ++Y  LI+G+ K  +++EA  L   M++KG +PT V
Sbjct: 190 KAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAV 249

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY ++  G  ++  +  A ++  +M+          + + +      G   EA ++   +
Sbjct: 250 TYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEM 309

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D+  Y  LID L  +GR+  A  +F S+  +    D +TY  +I      G +
Sbjct: 310 TARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNV 369

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           + A ++   M ++ V P+   + +L+ G+V++ +  +   +  +M    + P+A
Sbjct: 370 EAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNA 423



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 128/266 (48%), Gaps = 1/266 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ + Y ++ID L   G V +A+ +F  M  +   PD +TY ++I       +   A 
Sbjct: 314 CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAG 373

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   M   GV P    +N +MD   K  ++D+A  + D MV   ++PNA T++ LM G 
Sbjct: 374 EILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGL 433

Query: 132 CLTGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
              GK +RA  LF  M E        VSY ILI+G  K   V EA   ++EM+ +GI P 
Sbjct: 434 FKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPE 493

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             TY +L   L +  ++  A KL E+M +  V  D   Y+  I GL  +  +  A ++F+
Sbjct: 494 CHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQ 553

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGR 276
            +    C  +   Y  L  G   +GR
Sbjct: 554 EMMKRGCAPNEVTYKVLRRGFRAAGR 579



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 111/255 (43%), Gaps = 31/255 (12%)

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
           MGC+   VSYN +I+G     +++EA   +  M+  G +P V+ + TL  G  +  Q + 
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60

Query: 210 ALKLFEEMQ---RDDV----------------------------AADTSTYNTFIDGLCK 238
             KL  +     R DV                            + D  +Y T I GL  
Sbjct: 61  GHKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           +  I EA ELF  L    C  ++ AY  +IDGL K+GR+E  L+ F  +     V    T
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y ++I GLC    +  A  +F  M +    P+ I + TLI GF + +K  +  +LL  M 
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 240

Query: 359 EKKVMPDASIVSMVV 373
            K   P A     +V
Sbjct: 241 TKGPEPTAVTYGSIV 255


>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 917

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 115/306 (37%), Positives = 169/306 (55%), Gaps = 1/306 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFL-QMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           +PN VTYN +ID   K G   K  A F  +M+   + PD +T+NSL+        W  A+
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAAR 359

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM ++ ++  V ++N ++D +CK G+MD A  +L  M  + + PN  +YST++DGF
Sbjct: 360 NLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGF 419

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+ + A  LFG M  +    D VSYN L++ Y K    EEAL + REM S GIK  V
Sbjct: 420 AKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDV 479

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN L  G  +  + +   K+F EM+R+ V  +  TY+T IDG  K G   EA+E+FR 
Sbjct: 480 VTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFRE 539

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                   D+  Y+ LID LCK+G +  A+ L   + +  +  +VVTYN +I        
Sbjct: 540 FKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSAT 599

Query: 312 MDKAHD 317
           M+++ D
Sbjct: 600 MERSAD 605



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 174/332 (52%), Gaps = 4/332 (1%)

Query: 15  NTV-TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN-DWNEAKR 72
           NTV  ++ +I    + G  ++A ++F  MK   + P++VTYN++I        ++ +  +
Sbjct: 266 NTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK 325

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR-LLDLMVQRDVRPNAFTYSTLMDGF 131
            F EM    VQP  +TFN ++  +C  G + EA+R L D M  R +  + F+Y+TL+D  
Sbjct: 326 FFDEMQRNCVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAI 384

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A E+   M +     + VSY+ +I+G+ K    +EAL+L+ EM    I    
Sbjct: 385 CKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDR 444

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+YNTL     ++ + E AL +  EM    +  D  TYN  + G  K G   E  ++F  
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAE 504

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       ++  Y+ LIDG  K G  + A+E+FR      L ADVV Y+ +I  LC +G 
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGL 564

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           +  A  L  +M +  ++PNV+ + ++I  F R
Sbjct: 565 VGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 179/356 (50%), Gaps = 1/356 (0%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           + +I  L + G V  AK +F           V  +++LI     +    EA  +F  M +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296

Query: 80  QGVQPSVVTFNVIMDELCKNG-KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            G++P++VT+N ++D   K G +  + ++  D M +  V+P+  T+++L+      G   
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWE 356

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A  LF  M +   + D  SYN L++  CK  +++ A  +  +M +K I P VV+Y+T+ 
Sbjct: 357 AARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVI 416

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            G  +  + + AL LF EM+  ++A D  +YNT +    K G   EA+++ R +  +  +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            D+  YN L+ G  K G+ +   ++F  + R  ++ +++TY+ +I G    G   +A ++
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEV 536

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           F + +   +  +V+++  LI    +       + L+ +M ++ + P+    + ++D
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 176/370 (47%), Gaps = 7/370 (1%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKAL--FLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           +C  +  TY  II  L   G  DKA     F   +    N      +++I  L       
Sbjct: 193 LCGSDDCTY--IIRELGNRGECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVT 250

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            AKR+F      G   +V  F+ ++    ++G  +EA  + + M +  +RPN  TY+ ++
Sbjct: 251 IAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVI 310

Query: 129 DGFCLTG--KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           D  C  G  +  +  + F  M+    + D +++N L+    +    E A +L+ EM ++ 
Sbjct: 311 DA-CGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRR 369

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I+  V +YNTL   + +  Q++ A ++  +M    +  +  +Y+T IDG  K G   EA+
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEAL 429

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            LF  +  L   LD  +YN L+    K GR E AL++ R +    +  DVVTYN ++ G 
Sbjct: 430 NLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGY 489

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              G+ D+   +F +M+   V PN++ + TLI G+ +     + +E+  + K   +  D 
Sbjct: 490 GKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADV 549

Query: 367 SIVSMVVDLL 376
            + S ++D L
Sbjct: 550 VLYSALIDAL 559



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 139/309 (44%), Gaps = 49/309 (15%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           V  K + VTYN ++ G  K+G  D+ K +F +MK E++ P+++TY++LI G      + E
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +F E    G++  VV ++ ++D LCKNG +  A  L+D M +  + PN  TY++++D
Sbjct: 533 AMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592

Query: 130 GFCLTGKI---------------------------NRAEELFGSMESMGCKHDDVSYNIL 162
            F  +  +                           NR  +LFG + S G        N  
Sbjct: 593 AFGRSATMERSADYSNGGSLPFSSSALSELTETEGNRVIQLFGQLTSEG--------NNR 644

Query: 163 INGYCKN--KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           +   CK   +E+   L ++R+M    IKP VVT++ +       +  E A  L EE++  
Sbjct: 645 MTKDCKEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR-- 702

Query: 221 DVAADTSTYNTFIDGLC---KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC----K 273
               D   Y   + GL    +    ++A  LF  +  +        YN L D L     K
Sbjct: 703 --LFDNKVYGV-VHGLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQK 759

Query: 274 SGRLEIALE 282
            G   +ALE
Sbjct: 760 RGAELVALE 768


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 117/357 (32%), Positives = 200/357 (56%), Gaps = 5/357 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH---ANDWNE 69
           +PN  T+N +I+ LCK G ++KA+ +   MK    +P+VV+YN+LI G C         +
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYK 279

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +  EM++  V P++ TFN+++D   K+  +  + ++   M+ +DV+PN  +Y++L++
Sbjct: 280 ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLIN 339

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C  GKI+ A  +   M S G + + ++YN LING+CKN  ++EAL ++  +  +G  P
Sbjct: 340 GLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP 399

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           T   YN L     ++ +++    L EEM+R+ +  D  TYN  I GLC+NG I  A +LF
Sbjct: 400 TTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF 459

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             L   K   D+  ++ L++G C+ G    A  L + + +  L    +TYNI++ G C +
Sbjct: 460 DQL-TSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKE 518

Query: 310 GQMDKAHDLFLDME-ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           G +  A ++   ME E  +  NV  +  L+ G+ +  K      LL++M EK ++P+
Sbjct: 519 GNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 109/327 (33%), Positives = 186/327 (56%), Gaps = 5/327 (1%)

Query: 12  CKPNTVTYNTIIDGLCK---EGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           C PN V+YNT+IDG CK    G + KA A+  +M   +++P++ T+N LI G    ++  
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            + ++F EM+DQ V+P+V+++N +++ LC  GK+ EA  + D MV   V+PN  TY+ L+
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +GFC    +  A ++FGS++  G       YN+LI+ YCK  ++++  +L  EM  +GI 
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P V TYN L  GL     +E A KLF+++    +  D  T++  ++G C+ G   +A  L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAML 492

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR-RVLVADVVTYNIMIHGLC 307
            + +  +  +     YN ++ G CK G L+ A  +   + + R L  +V +YN+++ G  
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYS 552

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIF 334
             G+++ A+ L  +M E  + PN I +
Sbjct: 553 QKGKLEDANMLLNEMLEKGLVPNRITY 579



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/335 (32%), Positives = 178/335 (53%), Gaps = 11/335 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP       ++  L KE      + ++ +M    I P+V T+N +I+ LC     N+A+
Sbjct: 191 CKP-------LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKAR 243

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCK---NGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            +  +M   G  P+VV++N ++D  CK   NGKM +A  +L  MV+ DV PN  T++ L+
Sbjct: 244 DVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILI 303

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DGF     +  + ++F  M     K + +SYN LING C   ++ EA+S+  +MVS G++
Sbjct: 304 DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ 363

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P ++TYN L  G  +   ++ AL +F  ++       T  YN  ID  CK G I +   L
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +       D+  YNCLI GLC++G +E A +LF  L  + L  D+VT++I++ G C 
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCR 482

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            G+  KA  L  +M +  + P  + +  ++ G+ +
Sbjct: 483 KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK 517



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 182/355 (51%), Gaps = 17/355 (4%)

Query: 21  TIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG---LCHANDWNEAKRLFFEM 77
           + +DG  + G   +  ++F  +       D V  NS+I     L +AN  N    L FE 
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAIS----MCDNVCVNSIIADMLVLAYAN--NSRFELGFEA 175

Query: 78  MDQ----GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +    G + S ++   +M  L K  +  +   +   M++R ++PN FT++ +++  C 
Sbjct: 176 FKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCK 235

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCK---NKEVEEALSLYREMVSKGIKPT 190
           TGK+N+A ++   M+  GC  + VSYN LI+GYCK   N ++ +A ++ +EMV   + P 
Sbjct: 236 TGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPN 295

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           + T+N L  G ++   +  ++K+F+EM   DV  +  +YN+ I+GLC  G I EA+ +  
Sbjct: 296 LTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRD 355

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +     + ++  YN LI+G CK+  L+ AL++F S+  +  V     YN++I   C  G
Sbjct: 356 KMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLG 415

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++D    L  +ME   + P+V  +  LI G  R        +L  ++  K  +PD
Sbjct: 416 KIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPD 469



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 129/266 (48%), Gaps = 37/266 (13%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN ++YN++I+GLC  G + +A ++  +M    + P+++TYN+LI+G C  +   EA  
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALD 387

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  +  QG  P+   +N+++D  CK GK+D+   L + M +  + P+  TY+ L+ G C
Sbjct: 388 MFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLC 447

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP--- 189
             G I  A++LF  + S G   D V+++IL+ GYC+  E  +A  L +EM   G+KP   
Sbjct: 448 RNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHL 506

Query: 190 ---------------------------------TVVTYNTLFLGLFEIHQVEHALKLFEE 216
                                             V +YN L  G  +  ++E A  L  E
Sbjct: 507 TYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNE 566

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYI 242
           M    +  +  TY    + +   G++
Sbjct: 567 MLEKGLVPNRITYEIVKEEMVDQGFV 592



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 160/343 (46%), Gaps = 9/343 (2%)

Query: 38  LFLQMKGENINPDV-VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVT-FNVIMDE 95
           LF Q+    ++PD+ + Y S    L   +D + +  L F+++         +     +D 
Sbjct: 70  LFRQLISSELDPDLCLRYYSW---LVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDG 126

Query: 96  LCKNGKMDEASRLLDLMVQRD-VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
             +NG   +   +   +   D V  N+     L+  +    +     E F      G K 
Sbjct: 127 FVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKL 186

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
             +S   L+    K     +   +Y+EM+ + I+P V T+N +   L +  ++  A  + 
Sbjct: 187 SALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVM 246

Query: 215 EEMQRDDVAADTSTYNTFIDGLCK---NGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           E+M+    + +  +YNT IDG CK   NG + +A  + + +       ++  +N LIDG 
Sbjct: 247 EDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGF 306

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
            K   L  ++++F+ +  + +  +V++YN +I+GLCN G++ +A  +   M    V PN+
Sbjct: 307 WKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNL 366

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           I +  LI+GF + +   + +++   +K +  +P   + +M++D
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLID 409


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 113/334 (33%), Positives = 184/334 (55%), Gaps = 2/334 (0%)

Query: 40  LQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKN 99
           +Q+KG  + P+  TYN +I  LC      EA+R+  EM+ +G+ P  V +  ++D  CK 
Sbjct: 214 MQIKG--LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 271

Query: 100 GKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
           G +  A RL D M +R + P+  TY+ ++ G C TG++  A++LF  M     + D+V+Y
Sbjct: 272 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 331

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
             LI+GYCK  +++EA SL+ +M+  G+ P +VTY  L  GL +  +V+ A +L  EM R
Sbjct: 332 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 391

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
             +  +  TYN+ ++GLCK G I +AV+L + + +     D   Y  L+D  CKS  +  
Sbjct: 392 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 451

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A EL R +  R L   VVT+N++++G C  G ++    L   M E  + PN   + +LI 
Sbjct: 452 AHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIK 511

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            +   N      E+   M  K V+PD +  ++++
Sbjct: 512 QYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILI 545



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 189/365 (51%), Gaps = 6/365 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V Y T+IDG CK G V  A  LF +M+   I+PD +TY ++I GLC      EA +L
Sbjct: 256 PDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKL 315

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+ + ++P  VT+  ++D  CK GKM EA  L + M+Q  + PN  TY+ L DG C 
Sbjct: 316 FHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK 375

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A EL   M   G + +  +YN L+NG CK   +++A+ L ++M   G  P  VT
Sbjct: 376 CGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVT 435

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           Y TL     +  ++  A +L  +M   ++     T+N  ++G C +G + +  +L + + 
Sbjct: 436 YTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWML 495

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             GI+    +   YN LI   C    +    E++R +  + +V D  TYNI+I G C   
Sbjct: 496 EKGIMP---NATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKAR 552

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            M +A  L  DM        V  +  LI GF +  K  +  EL  +M+ + ++ D  I +
Sbjct: 553 NMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYN 612

Query: 371 MVVDL 375
           +  D+
Sbjct: 613 IFADI 617



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/307 (34%), Positives = 166/307 (54%), Gaps = 3/307 (0%)

Query: 10  VVCK---PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           +VCK   P+ VTY  +IDG CKEG + +A +L  QM    + P++VTY +L  GLC   +
Sbjct: 319 MVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGE 378

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            + A  L  EM  +G++ ++ T+N +++ LCK G +D+A +L+  M      P+A TY+T
Sbjct: 379 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 438

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           LMD +C + ++ RA EL   M     +   V++N+L+NG+C +  +E+   L + M+ KG
Sbjct: 439 LMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 498

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I P   TYN+L       + +    +++  M    V  D +TYN  I G CK   + EA 
Sbjct: 499 IMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW 558

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            L R +      L + +YN LI G  K  +   A ELF  + R  LVAD   YNI     
Sbjct: 559 FLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADIN 618

Query: 307 CNDGQMD 313
            ++G+M+
Sbjct: 619 YDEGKME 625



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 162/302 (53%)

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  EM  +G++P+  T+N ++  LCK GK+ EA R+L  M+   + P+   Y+TL+DGF
Sbjct: 209 KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGF 268

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G ++ A  LF  M+      D ++Y  +I G C+   V EA  L+ EMV K ++P  
Sbjct: 269 CKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDE 328

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY  L  G  +  +++ A  L  +M +  +  +  TY    DGLCK G +  A EL   
Sbjct: 329 VTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHE 388

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     EL+I  YN L++GLCK+G ++ A++L + +       D VTY  ++   C   +
Sbjct: 389 MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE 448

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           M +AH+L   M +  + P V+ F  L++GF          +LL  M EK +MP+A+  + 
Sbjct: 449 MVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNS 508

Query: 372 VV 373
           ++
Sbjct: 509 LI 510



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/287 (34%), Positives = 146/287 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  + DGLCK G VD A  L  +M  + +  ++ TYNSL++GLC A + ++A +L
Sbjct: 361 PNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKL 420

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   G  P  VT+  +MD  CK+ +M  A  LL  M+ R+++P   T++ LM+GFC+
Sbjct: 421 MKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCM 480

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G +   E+L   M   G   +  +YN LI  YC    +     +YR M +KG+ P   T
Sbjct: 481 SGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNT 540

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +   ++ A  L  +M         S+YN  I G  K    +EA ELF  + 
Sbjct: 541 YNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMR 600

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
                 D + YN   D     G++E+ LEL      + LV D+ T N
Sbjct: 601 REGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 647



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 151/305 (49%), Gaps = 28/305 (9%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A++LF +M++ G+  SV + N+ +  L ++                            +D
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSED----------------------------LD 196

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G  +  K     +L   M+  G K +  +YN +I   CK  +V EA  + REM+S+GI P
Sbjct: 197 GIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAP 256

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             V Y TL  G  ++  V  A +LF+EMQ+  ++ D  TY   I GLC+ G ++EA +LF
Sbjct: 257 DGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLF 316

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +   + E D   Y  LIDG CK G+++ A  L   + +  L  ++VTY  +  GLC  
Sbjct: 317 HEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKC 376

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++D A++L  +M    +  N+  + +L++G  +     + ++L+  M+     PDA   
Sbjct: 377 GEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTY 436

Query: 370 SMVVD 374
           + ++D
Sbjct: 437 TTLMD 441



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 105/218 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY T++D  CK   + +A  L  QM    + P VVT+N L++G C +    + ++L
Sbjct: 431 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 490

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+++G+ P+  T+N ++ + C    M   + +   M  + V P+  TY+ L+ G C 
Sbjct: 491 LKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCK 550

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +  A  L   M   G      SYN LI G+ K K+  EA  L+ +M  +G+      
Sbjct: 551 ARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREI 610

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           YN      ++  ++E  L+L +E     +  D  T NT
Sbjct: 611 YNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 648



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 84/184 (45%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VT+N +++G C  G ++  + L   M  + I P+  TYNSLI   C  N+      
Sbjct: 465 QPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTE 524

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++  M  +GV P   T+N+++   CK   M EA  L   MV +       +Y+ L+ GF 
Sbjct: 525 IYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFY 584

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K   A ELF  M   G   D   YNI  +      ++E  L L  E + K +   + 
Sbjct: 585 KRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQ 644

Query: 193 TYNT 196
           T NT
Sbjct: 645 TKNT 648


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 184/353 (52%), Gaps = 3/353 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           NT +YN ++  LC  G +  A  LF +M      PDVVTY  ++HG C  ++   A +L 
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLL 308

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM  +G++ + V +  ++  LC  G++ +A R+++ MV   V  +A  ++T+M GFC  
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +  A   F  M+  G   D V+Y  LING C+  E++EA  + +EM  KG+    VTY
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  G  ++ ++  A  +  +M +  V  +  TY    DGLCK G +  A EL   +  
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              EL+I  YN LI+GLCK+G LE A+     +    L  DV TY  +I  LC   ++D+
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           AH L  +M +  + P ++ +  L++GF    +      LL  M EK + P+ +
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTT 601



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 181/361 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +   + T++ G C++G +  A+  F +M+   +  D VTY +LI+GLC A +  EA+R+ 
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVL 413

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM D+G+    VT+ V++D  CK GKM EA  + + MVQ+ V PN  TY+ L DG C  
Sbjct: 414 QEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQ 473

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +  A EL   M S G + +  +YN LING CK   +E+A+    +M   G+KP V TY
Sbjct: 474 GDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTY 533

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            T+   L +  +++ A  L +EM    +     TYN  ++G C +G +     L   +  
Sbjct: 534 TTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLE 593

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                +   YN L+   C    ++   E+++ +  + +V +  TYNI+I G C    M +
Sbjct: 594 KNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKE 653

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A     +M E         +  LI    +  K ++   L  KM++ ++  +  + +  +D
Sbjct: 654 ALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYID 713

Query: 375 L 375
           L
Sbjct: 714 L 714



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 179/360 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY  ++ G C    ++ A  L  +M    +  + V Y S+I  LC     ++A R+
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRV 342

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+  GV      F  +M   C+ G +  A    D M +R +  +  TY+ L++G C 
Sbjct: 343 VEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCR 402

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  AE +   ME  G   D V+Y +LI+GYCK  ++ EA  ++ +MV K + P VVT
Sbjct: 403 AGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVT 462

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +   V  A +L  EM    +  +  TYN+ I+GLCK G + +A+     + 
Sbjct: 463 YTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMD 522

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+  Y  +I  LC+S  L+ A  L + +  + +   +VTYN++++G C  G+++
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
               L   M E  + PN   + +L+  +          E+   M  ++V+P+ +  ++++
Sbjct: 583 GGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 141/256 (55%), Gaps = 35/256 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR- 72
           PN VTY  + DGLCK+G V  A  L  +M  + +  ++ TYNSLI+GLC A +  +A R 
Sbjct: 458 PNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRT 517

Query: 73  ----------------------------------LFFEMMDQGVQPSVVTFNVIMDELCK 98
                                             L  EM+D+G++P++VT+NV+M+  C 
Sbjct: 518 MIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCM 577

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           +G+++   RLL+ M+++++ PN  TY++LM  +C+   +    E++  M S     ++ +
Sbjct: 578 SGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENT 637

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YNILI G+CK + ++EAL  + EM+ KG + T  +YN L   L +  +   A +LFE+M+
Sbjct: 638 YNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMR 697

Query: 219 RDDVAADTSTYNTFID 234
           +D + A+   YN +ID
Sbjct: 698 KDRLTAEPDVYNFYID 713



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 171/362 (47%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V Y ++I  LC EG V  A  +   M    +  D   + +++ G C   D   A+  F
Sbjct: 319 NPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF 378

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM  +G+    VT+  +++ LC+ G++ EA R+L  M  + +  +A TY+ L+DG+C  
Sbjct: 379 DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK+  A  +   M       + V+Y  L +G CK  +V  A  L  EM SKG++  + TY
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N+L  GL +   +E A++   +M    +  D  TY T I  LC++  +  A  L + +  
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              +  I  YN L++G C SGR+E    L   +  + +  +  TYN ++   C +  M  
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +++  M    V PN   +  LI G  +     + +    +M EK     AS  + ++ 
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIR 678

Query: 375 LL 376
           LL
Sbjct: 679 LL 680



 Score =  141 bits (355), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 168/342 (49%), Gaps = 11/342 (3%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
           +  L L+++   I+P   + N+++  L      +EA +LF E+ ++    +  ++N+++ 
Sbjct: 210 SAPLLLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELPEK----NTCSYNILLK 261

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            LC  G++ +A +L D M      P+  TY  ++ G+C   ++  A +L   M + G + 
Sbjct: 262 ALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLEL 318

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           + V+Y  +I   C   +V +A+ +  +MV  G+      + T+  G      +  A   F
Sbjct: 319 NPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF 378

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           +EMQ+  +AAD  TY   I+GLC+ G + EA  + + +     ++D   Y  LIDG CK 
Sbjct: 379 DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G++  A  +   + ++ +  +VVTY  +  GLC  G +  A++L  +M    +  N+  +
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +LI+G  +     + +  +  M E  + PD    + ++  L
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 79/171 (46%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VTYN +++G C  G V+  K L   M  +NI+P+  TYNSL+   C   +      
Sbjct: 562 KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++  M+ Q V P+  T+N+++   CK   M EA      M+++  R  A +Y+ L+    
Sbjct: 622 IYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLN 681

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
              K   A  LF  M       +   YN  I+       +E  L+L  E+V
Sbjct: 682 KKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 116/327 (35%), Positives = 177/327 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    +N ++ G CK G V  A+ +F ++    + P VV++N+LI G C + D  E  RL
Sbjct: 246 PKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRL 305

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +GV P V TF+ +++ LCK G++DE S L D M  R + PN  T++TL+DG C 
Sbjct: 306 KGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCK 365

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A + F  M + G + D V+YN LING CK  +++EA  L  EM + G+KP  +T
Sbjct: 366 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKIT 425

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           + TL  G  +   +E AL++   M  + +  D   +   I GLC+ G + +A  +   + 
Sbjct: 426 FTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDML 485

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D   Y  +ID  CK G +++  +L + +     V  VVTYN +++GLC  GQM 
Sbjct: 486 SAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMK 545

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHG 340
            A  L   M    VAPN I +  L+ G
Sbjct: 546 NAKMLLDAMLNVGVAPNDITYNILLDG 572



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 184/343 (53%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           ++++ AL+L++      P +  +N L+HG C A D   A+ +F E+  +G++P+VV+FN 
Sbjct: 229 IERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNT 288

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           ++   CK+G ++E  RL  +M    V P+ FT+S L++G C  G+++    LF  M   G
Sbjct: 289 LISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRG 348

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
              + V++  LI+G CK  +V+ AL  ++ M+++G++P +VTYN L  GL ++  ++ A 
Sbjct: 349 LVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 408

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           +L  EM    +  D  T+ T IDG CK+G +  A+E+ R +     ELD  A+  LI GL
Sbjct: 409 RLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGL 468

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C+ GR+  A  +   +       D  TY ++I   C  G +     L  +M+ +   P V
Sbjct: 469 CREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGV 528

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + +  L++G  +  +      LL  M    V P+    ++++D
Sbjct: 529 VTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLD 571



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 161/299 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  V++NT+I G CK G V++   L   M+ E + PDV T+++LI+GLC     +E   
Sbjct: 280 RPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSL 339

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  +G+ P+ VTF  ++D  CK GK+D A +   +M+ + VRP+  TY+ L++G C
Sbjct: 340 LFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLC 399

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  L   M + G K D +++  LI+G CK+ ++E AL + R MV +GI+   V
Sbjct: 400 KVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDV 459

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            +  L  GL    +V  A ++  +M       D  TY   ID  CK G +    +L + +
Sbjct: 460 AFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEM 519

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                   +  YN L++GLCK G+++ A  L  ++    +  + +TYNI++ G    G 
Sbjct: 520 QSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGS 578



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 97/264 (36%), Positives = 150/264 (56%), Gaps = 5/264 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VT+ T+IDG CK G VD A   F  M  + + PD+VTYN+LI+GLC   D  EA+RL
Sbjct: 351 PNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRL 410

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G++P  +TF  ++D  CK+G M+ A  +   MV+  +  +   ++ L+ G C 
Sbjct: 411 VNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCR 470

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A  +   M S G K DD +Y ++I+ +CK  +V+    L +EM S G  P VVT
Sbjct: 471 EGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVT 530

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT-L 252
           YN L  GL +  Q+++A  L + M    VA +  TYN  +DG  K+G  V+ V++F +  
Sbjct: 531 YNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVD-VDIFNSEK 589

Query: 253 GILKCELDIQAYNCLIDGLCKSGR 276
           G++    D  +Y  L++   K+ +
Sbjct: 590 GLVT---DYASYTALVNESSKTSK 610



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 130/241 (53%), Gaps = 1/241 (0%)

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           +I R+  L+  +   G       +N+L++G+CK  +V  A  ++ E+  +G++PTVV++N
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           TL  G  +   VE   +L   M+ + V  D  T++  I+GLCK G + E   LF  +   
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR 347

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
               +   +  LIDG CK G++++AL+ F+ +  + +  D+VTYN +I+GLC  G + +A
Sbjct: 348 GLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 407

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV-MPDASIVSMVVD 374
             L  +M  + + P+ I F TLI G  +       +E+  +M E+ + + D +  +++  
Sbjct: 408 RRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISG 467

Query: 375 L 375
           L
Sbjct: 468 L 468



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 2/209 (0%)

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH--QVEHALKLFEE 216
           ++ LI+ Y  +    +A+  +R +        +     L   +  +   ++E +  L+ E
Sbjct: 179 FDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALYLE 238

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           +           +N  + G CK G +  A  +F  +        + ++N LI G CKSG 
Sbjct: 239 VLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGD 298

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +E    L   +    +  DV T++ +I+GLC +G++D+   LF +M    + PN + F T
Sbjct: 299 VEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTT 358

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LI G  +  K    ++    M  + V PD
Sbjct: 359 LIDGQCKGGKVDLALKNFQMMLAQGVRPD 387


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 195/363 (53%), Gaps = 6/363 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TY  ++ GL K G +  A  +  +M      PD  T   ++  LC  +  ++A+ L
Sbjct: 147 PDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAREL 206

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA-SRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             EM+ +G+  + +T++ ++D LCK  ++DEA + LL  + +R   P+  TYST++DG C
Sbjct: 207 VEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLC 266

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A ++F   E M C    ++YN LI GYC+  +++EA+ L  +MV     P V+
Sbjct: 267 KAGRLRDAVDIF---EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVI 323

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL     ++ +++ A +LF++M  + ++ D  T+ + +DGLC  G + +A+EL   +
Sbjct: 324 TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 383

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C   I  YNC++DG CKS ++  A EL      R  V + VTYNI++ G C  G+ 
Sbjct: 384 TRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRT 443

Query: 313 DKAHDLF--LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           D+A      L+ E      +V ++  ++    R  +    ++   +M ++  +P A+  +
Sbjct: 444 DQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFA 503

Query: 371 MVV 373
            VV
Sbjct: 504 TVV 506



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 179/347 (51%), Gaps = 6/347 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFL-QMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           N +TY+ ++DGLCK   +D+A AL L ++      PD+VTY+++I GLC A    +A  +
Sbjct: 218 NAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDI 277

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM      P+ +T+N ++   C+ G MDEA RLL  MV  +  P+  TY+TLM  FC 
Sbjct: 278 FEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCK 334

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A ELF  M +     D V++  L++G C    +E+AL L  E+  +G  PT+ T
Sbjct: 335 MGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYT 394

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  G  + +QV  A +L  + +      +T TYN  + G C+ G   +A++    L 
Sbjct: 395 YNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLN 454

Query: 254 IL--KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                C   +  Y  ++D LC+ GR + A++ +  + +R  V    T+  ++  LC   Q
Sbjct: 455 SEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQ 514

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
             +AH+L  +M +    P       ++  + R     K  EL  +++
Sbjct: 515 PQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 561



 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 181/364 (49%), Gaps = 8/364 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ V  NTI+  LC       A ALF +M  E    +  TY +LIH LC A   +EA  
Sbjct: 43  SPDPVELNTILAELCDARDTTTAMALFDKM-AELGAVNHTTYYNLIHPLCKARLLDEAMG 101

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF-TYSTLMDGF 131
           L  +M  +G+ P  +  NV++  LC+ G++  A  +   M   D  P  F TY+ L+ G 
Sbjct: 102 LLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM--NDAHPPDFLTYTKLVHGL 159

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G++  A ++   M S     D+ +  +++   C    V++A  L  EM+ +G+    
Sbjct: 160 SKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANA 219

Query: 192 VTYNTLFLGLFEIHQVEHALKLF-EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           +TY+ L  GL +  +++ A+ L   E+ R     D  TY+T IDGLCK G + +AV++F 
Sbjct: 220 ITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE 279

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C      YN LI G C++G ++ A+ L   +       DV+TY  ++   C  G
Sbjct: 280 EM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMG 336

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++D A++LF  M  N ++P+V+ F +L+ G     +    +ELL ++  +   P     +
Sbjct: 337 RLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYN 396

Query: 371 MVVD 374
            VVD
Sbjct: 397 CVVD 400



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 181/368 (49%), Gaps = 15/368 (4%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFL-QMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           ++ T+  ++ GL     +     L L +++   ++PD V  N+++  LC A D   A  L
Sbjct: 9   DSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMAL 68

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M + G       +N+I   LCK   +DEA  LL  M  R + P    ++ ++ G C 
Sbjct: 69  FDKMAELGAVNHTTYYNLI-HPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCR 127

Query: 134 TGKINRAEELFGSMESMGCKH--DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            G++  A    G    M   H  D ++Y  L++G  K   + +A+ + +EMVS    P  
Sbjct: 128 AGRLRHA---LGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDN 184

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T   +   L    +V+ A +L EEM    +AA+  TY+  +DGLCK   + EAV L   
Sbjct: 185 TTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALL-- 242

Query: 252 LGILKCE---LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           LG +       DI  Y+ +IDGLCK+GRL  A+++F  +         +TYN +I G C 
Sbjct: 243 LGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCR 299

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G MD+A  L   M ++  AP+VI + TL+  F ++ +     EL  +M   K+ PD   
Sbjct: 300 AGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVT 359

Query: 369 VSMVVDLL 376
            + +VD L
Sbjct: 360 FTSLVDGL 367



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 151/286 (52%), Gaps = 18/286 (6%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  +TYN++I G C+ G +D+A  L  +M  +N  PDV+TY +L+   C     ++A 
Sbjct: 283 CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAY 342

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF +M+   + P VVTF  ++D LC  G+M++A  LL+ + +R   P  +TY+ ++DG+
Sbjct: 343 ELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGY 402

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG--IKP 189
           C + ++ +AEEL     S G   + V+YNIL+ G C+    ++AL    ++ S+G     
Sbjct: 403 CKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPT 462

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           +V  Y  +   L    + + A++ +EEM QR  V A  +T+ T +  LCK     +A EL
Sbjct: 463 SVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPA-AATFATVVFALCKAHQPQQAHEL 521

Query: 249 F-------RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
                    T G   C+  + AY       C++G ++ A EL   L
Sbjct: 522 LEEMIKYGHTPGPGTCDAVVSAY-------CRAGMIQKADELASEL 560



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 3/196 (1%)

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEH-ALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           M+  G      T+  +  GL    ++ H    L +E++   ++ D    NT +  LC   
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
               A+ LF  +  L        YN LI  LCK+  L+ A+ L   +  R +    + +N
Sbjct: 61  DTTTAMALFDKMAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           ++I GLC  G++  A  ++  M  +A  P+ + +  L+HG  +  +    +++L +M   
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSA 178

Query: 361 KVMPDASIVSMVVDLL 376
           + +PD + +++VV  L
Sbjct: 179 RHVPDNTTLTVVVQSL 194



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 46/100 (46%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C  +   Y  I+D LC++G  D A   + +M      P   T+ +++  LC A+   
Sbjct: 457 GGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQ 516

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           +A  L  EM+  G  P   T + ++   C+ G + +A  L
Sbjct: 517 QAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 556


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 189/359 (52%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G+  KPN V+YNTII G    G ++ A+ +   M+ + I PD  TY SLI G+C      
Sbjct: 277 GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 336

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  LF +M++ G+ P+ VT+N ++D  C  G ++ A    D MV++ + P+  TY+ L+
Sbjct: 337 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 396

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
               + G++  A+++   M   G   D ++YNILINGY +    ++A  L+ EM+SKGI+
Sbjct: 397 HALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIE 456

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           PT VTY +L   L   ++++ A  LFE++    V+ D   +N  +DG C NG +  A  L
Sbjct: 457 PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFML 516

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            + +       D   +N L+ G C+ G++E A  L   + RR +  D ++YN +I G   
Sbjct: 517 LKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGR 576

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            G +  A  +  +M      P ++ +  LI    +  +     ELL +M  K + PD S
Sbjct: 577 RGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDS 635



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 186/359 (51%), Gaps = 2/359 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E G+V  P   T N ++    K   ++ A  L+ +M    I+  V T+N +++ LC    
Sbjct: 207 EKGIV--PKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 264

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A+     M   G +P+VV++N I+      G ++ A R+LD M  + + P+++TY +
Sbjct: 265 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 324

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ G C  G++  A  LF  M  +G   + V+YN LI+GYC   ++E A S   EMV KG
Sbjct: 325 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 384

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I P+V TYN L   LF   ++  A  + +EM++  +  D  TYN  I+G  + G   +A 
Sbjct: 385 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 444

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +L   +     E     Y  LI  L +  R++ A +LF  +  + +  DV+ +N M+ G 
Sbjct: 445 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGH 504

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           C +G +++A  L  +M+  +V P+ + F TL+ G  R  K  +   LL +MK + + PD
Sbjct: 505 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPD 563



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 172/354 (48%), Gaps = 6/354 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +++ ++ ++   C+    D+A   F  MK + I P + T N ++      N    A  L+
Sbjct: 178 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 237

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM    +  +V TFN++++ LCK GK+ +A   +  M     +PN  +Y+T++ G+   
Sbjct: 238 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 297

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G I  A  +  +M   G + D  +Y  LI+G CK   +EEA  L+ +MV  G+ P  VTY
Sbjct: 298 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 357

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA---VELFRT 251
           NTL  G      +E A    +EM +  +    STYN  +  L   G + EA   ++  R 
Sbjct: 358 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 417

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
            GI+    D   YN LI+G  + G  + A +L   +  + +    VTY  +I+ L    +
Sbjct: 418 KGIIP---DAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 474

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           M +A DLF  + +  V+P+VI+F  ++ G        +   LL +M  K V PD
Sbjct: 475 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPD 528



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 133/231 (57%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TYN +I+G  + G   KA  L  +M  + I P  VTY SLI+ L   N   EA  L
Sbjct: 422 PDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDL 481

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +++DQGV P V+ FN ++D  C NG ++ A  LL  M ++ V P+  T++TLM G C 
Sbjct: 482 FEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCR 541

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A  L   M+  G K D +SYN LI+GY +  ++++A  +  EM+S G  PT++T
Sbjct: 542 EGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLT 601

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           YN L   L +  + + A +L +EM    ++ D STY + I+G+     +VE
Sbjct: 602 YNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 652



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 120/236 (50%), Gaps = 1/236 (0%)

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
           +EL  S + +  K   + +++L+   C+ +  +EA   +  M  KGI P + T N +   
Sbjct: 165 DELTLSRDRLSVK-SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSL 223

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
             +++++E A  L+ EM R  +++   T+N  ++ LCK G + +A E    +  L  + +
Sbjct: 224 FLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPN 283

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           + +YN +I G    G +E A  +  ++  + +  D  TY  +I G+C +G++++A  LF 
Sbjct: 284 VVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFD 343

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            M E  + PN + + TLI G+       +      +M +K +MP  S  +++V  L
Sbjct: 344 KMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 399



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 129/290 (44%), Gaps = 35/290 (12%)

Query: 85  SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELF 144
           S + F++++   C+  + DEA +   +M ++ + P   T + ++  F    ++  A  L+
Sbjct: 178 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 237

Query: 145 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 204
             M  +       ++NI++N  CK  ++++A      M   G KP VV+YN         
Sbjct: 238 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYN--------- 288

Query: 205 HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
                                     T I G    G I  A  +   + +   E D   Y
Sbjct: 289 --------------------------TIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 322

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
             LI G+CK GRLE A  LF  +    LV + VTYN +I G CN G +++A     +M +
Sbjct: 323 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 382

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             + P+V  +  L+H      +  +  +++ +M++K ++PDA   +++++
Sbjct: 383 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 432


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 201/377 (53%), Gaps = 18/377 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY  +ID  CK G +++A++ F +M+    + +VVTY +L+H    A    +A  +
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDI 380

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD----------------V 117
           F  M+D G  P+ +T++ ++D LCK G++ +A  +   ++                   +
Sbjct: 381 FNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSI 440

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
            PN  TY  L+DG C   K+  A+EL  +M S GC+ + + Y+ LI+G+CK  +++ A  
Sbjct: 441 APNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQE 500

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           ++  M   G  PTV TY +L   +F+  +++ A+K+  +M       +  TY   IDGLC
Sbjct: 501 VFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLC 560

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           + G   +A++L   +    C  ++  Y  LIDGL KSG+++++L+LF  +  +    + V
Sbjct: 561 RIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYV 620

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           TY ++I+  C  G +D+AH L  +M++      +  + +++ GF +  K    + LL ++
Sbjct: 621 TYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSK--KFIASLGLLEEL 678

Query: 358 KEKKVMPDASIVSMVVD 374
           +    +P A +  +++D
Sbjct: 679 ESHGTVPIAPVYGLLID 695



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 202/411 (49%), Gaps = 54/411 (13%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKG----------------ENIN 48
           N  I   C PNT+TY+ ++DGLCK G + KA  ++ ++ G                ++I 
Sbjct: 382 NRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIA 441

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P+VVTY +LI GLC A+   +A+ L   M+  G +P+ + ++ ++D  CK GK+D A  +
Sbjct: 442 PNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEV 501

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
              M +    P   TY++L+D      +++ A ++   M    C  + V+Y  +I+G C+
Sbjct: 502 FLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCR 561

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             E ++AL L   M  KG  P VVTY  L  GL +  +V+ +L+LF +M     A +  T
Sbjct: 562 IGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVT 621

Query: 229 YNTFIDGLCKNGYIVEAVELFR---------------------------TLGILKCELDI 261
           Y   I+  C  G + EA  L                             +LG+L+ EL+ 
Sbjct: 622 YRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLE-ELES 680

Query: 262 QA-------YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT---YNIMIHGLCNDGQ 311
                    Y  LID   K+GRLE ALEL + +       ++ +   Y  +I  LC   Q
Sbjct: 681 HGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQ 740

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           ++KA +L+ ++    V P + +FV LI G +++NK ++ ++L + + ++ V
Sbjct: 741 LEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGV 791



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 196/457 (42%), Gaps = 92/457 (20%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY T++ G  K+  +   K +   M  E  NP+   +NSL+H  C+A D+  A 
Sbjct: 138 CIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAY 197

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDE------------------------------------ 95
           +L   M D G  P  V +N+ +                                      
Sbjct: 198 KLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTA 257

Query: 96  -----LCKNGKMDEASRLLDLMVQRDVRPNAFTYST------------------------ 126
                LC  GK D A +++ +M+ +   P+  TYS                         
Sbjct: 258 NFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSV 317

Query: 127 -----------LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
                      L+D FC  G I +A   F  M S+GC  + V+Y  L++ Y K K++ +A
Sbjct: 318 GVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQA 377

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL----------------FEEMQR 219
             ++  M+  G  P  +TY+ L  GL +  +++ A ++                FE    
Sbjct: 378 SDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHT 437

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
           D +A +  TY   IDGLCK   +V+A EL   +    CE +   Y+ LIDG CK G+++ 
Sbjct: 438 DSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDN 497

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A E+F  + +   +  V TY  +I  +  D ++D A  +   M E++  PNV+ +  +I 
Sbjct: 498 AQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMID 557

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           G  RI +  K ++LL  M+EK   P+    + ++D L
Sbjct: 558 GLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGL 594



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 176/372 (47%), Gaps = 20/372 (5%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N V        LC  G  D A  +   M G+   PD  TY+ +I  LC A    +A 
Sbjct: 249 CVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAF 308

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM   GV P V T+ +++D  CK G +++A    D M       N  TY+ L+  +
Sbjct: 309 LLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAY 368

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV-------- 183
               ++ +A ++F  M   GC  + ++Y+ L++G CK  E+++A  +Y +++        
Sbjct: 369 LKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGS 428

Query: 184 --------SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
                   +  I P VVTY  L  GL + H+V  A +L + M  +    +   Y+  IDG
Sbjct: 429 DFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDG 488

Query: 236 LCKNGYIVEAVELFRTLGILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
            CK G I  A E+F  L + KC     +  Y  LID + K  RL++A+++   +      
Sbjct: 489 FCKVGKIDNAQEVF--LRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCT 546

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            +VVTY  MI GLC  G+  KA  L   MEE   +PNV+ +  LI G  +  K    ++L
Sbjct: 547 PNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQL 606

Query: 354 LHKMKEKKVMPD 365
             +M  K   P+
Sbjct: 607 FIQMSTKGCAPN 618



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 165/384 (42%), Gaps = 22/384 (5%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +TV    +I GL +    D+A +   +M+  +  P+VVTY +L+ G          KR
Sbjct: 104 KLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKR 163

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   MM +G  P+   FN ++   C       A +LL  M      P    Y+  +   C
Sbjct: 164 IINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSIC 223

Query: 133 LTGKINR------AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
              ++        AE+++  M +  C  + V+        C   + + A  + + M+ KG
Sbjct: 224 GGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKG 283

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
             P   TY+ +   L E  +VE A  LF+EM+   V  D  TY   ID  CK G I +A 
Sbjct: 284 FVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQAR 343

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
             F  +  + C  ++  Y  L+    K+ +L  A ++F  +       + +TY+ ++ GL
Sbjct: 344 SWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGL 403

Query: 307 CNDGQMDKAHDLFLDM----------------EENAVAPNVIIFVTLIHGFVRINKPSKV 350
           C  G++ KA +++  +                  +++APNV+ +  LI G  + +K    
Sbjct: 404 CKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDA 463

Query: 351 IELLHKMKEKKVMPDASIVSMVVD 374
            ELL  M      P+  I   ++D
Sbjct: 464 QELLDAMLSNGCEPNHIIYDALID 487



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 148/375 (39%), Gaps = 40/375 (10%)

Query: 41  QMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
           ++K     P   TYN+L+  L  A   +   R+  EM + G      T       LCK G
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 101 K--------------------------------MDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +                                 DEA   L  M      PN  TY TL+
Sbjct: 90  RWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLL 149

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            GF    ++   + +   M   GC  +   +N L++ YC  ++   A  L + M   G  
Sbjct: 150 TGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCP 209

Query: 189 PTVVTYNTLFLG-------LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           P  V YN +F+G       L     +  A K++EEM       +      F   LC  G 
Sbjct: 210 PGYVAYN-IFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGK 268

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
              A ++ + +       D   Y+ +I  LC++ ++E A  LF+ +    +  DV TY I
Sbjct: 269 FDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTI 328

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +I   C  G +++A   F +M     + NV+ +  L+H +++  +  +  ++ ++M +  
Sbjct: 329 LIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAG 388

Query: 362 VMPDASIVSMVVDLL 376
             P+    S +VD L
Sbjct: 389 CPPNTITYSALVDGL 403


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 208/398 (52%), Gaps = 36/398 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEAK 71
            PN VTY  ++ G CK+G +++A+ +  +MK   +I  D V Y  +I+G C     ++A 
Sbjct: 285 SPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDAT 344

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R+  EM D G+  ++  +N +++ LCK G+M+E  ++L  M    +RP+ ++Y+TL+DG+
Sbjct: 345 RVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGY 404

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + +A E+   M   G     ++YN L+ G+C    +++AL L+  M+ +G+ P  
Sbjct: 405 CREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNE 464

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++ +TL  GLF+  + E AL L++E     +A +  T+NT I+GLCK G + EA EL   
Sbjct: 465 ISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDR 524

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIA---------------LELFRS---------- 286
           +  L+C  D   Y  L DG CK G+L  A               +E+F S          
Sbjct: 525 MKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQ 584

Query: 287 ----------LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
                     +  R L  ++VTY  +I G C +G + +A +L+ +M  N + PNV I   
Sbjct: 585 WHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSA 644

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           L+  F +  K  +   +L K+    ++P  SI ++ +D
Sbjct: 645 LMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEID 682



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 185/379 (48%), Gaps = 26/379 (6%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+++TY T+ DG CK G +  A  L  +M+     P V  +NS I G   A  W++  
Sbjct: 530 CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVN 589

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  EM  +G+ P++VT+  ++   CK G + EA  L   MV   + PN F  S LM  F
Sbjct: 590 DIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCF 649

Query: 132 CLTGKINRAEELFGSMESM----GCK----------------------HDDVSYNILING 165
              GK++ A  +   + ++    GC                         +V +N++I G
Sbjct: 650 YKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFG 709

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
            CK+  + +A SL+  + +K   P   TY++L  G      ++ A  L + M    +  +
Sbjct: 710 LCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPN 769

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
             TYN+ I GLCK+G +  AV LF  L       +   YN LID  CK G+   A +L +
Sbjct: 770 IITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQ 829

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            +    +   V+TY+I+I+GLC  G M++A  L   M EN V PN I + TLIHG+++  
Sbjct: 830 KMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSG 889

Query: 346 KPSKVIELLHKMKEKKVMP 364
              ++ +L  +M  + ++P
Sbjct: 890 NMEEISKLYDEMHIRGLLP 908



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 197/423 (46%), Gaps = 61/423 (14%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  +YNT+IDG C+EG + KA  +   M    +    +TYN+L+ G C  +  ++A R
Sbjct: 391 RPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALR 450

Query: 73  LFFEMMDQGVQPS-----------------------------------VVTFNVIMDELC 97
           L+F M+ +GV P+                                   V+TFN +++ LC
Sbjct: 451 LWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLC 510

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K G+M EA  LLD M +    P++ TY TL DG+C  G++  A  L   ME +G      
Sbjct: 511 KIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVE 570

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            +N  I G+   K+  +   ++ EM ++G+ P +VTY  L  G  +   +  A  L+ EM
Sbjct: 571 MFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEM 630

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEA---------VELFRTLGILKCELDIQA----- 263
             + +  +    +  +    K G + EA         +++     I   E+D  +     
Sbjct: 631 VNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDT 690

Query: 264 ------------YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                       +N +I GLCKSGR+  A  LF SL  +  + D  TY+ +IHG    G 
Sbjct: 691 IADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGS 750

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A  L   M    + PN+I + +LI+G  +  K S+ + L +K++ K + P+    + 
Sbjct: 751 IDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNT 810

Query: 372 VVD 374
           ++D
Sbjct: 811 LID 813



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 198/373 (53%), Gaps = 3/373 (0%)

Query: 3   NGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC 62
           +G G++G  C+P+  + N +++ L + G    A  ++ QM+   + PD  T   +    C
Sbjct: 172 DGMGKVG--CRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYC 229

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
                 +A     EM   G++ ++V ++ +MD  C  G  ++A R+L+ + ++ + PN  
Sbjct: 230 RDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVV 289

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYRE 181
           TY+ L+ G+C  G++  AE +   M+  G    D+V+Y ++INGYC+   +++A  +  E
Sbjct: 290 TYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNE 349

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M   GI   +  YNT+  GL ++ ++E   K+ +EM+   +  D  +YNT IDG C+ G 
Sbjct: 350 MRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGS 409

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           + +A E+ R +           YN L+ G C    ++ AL L+  + +R +  + ++ + 
Sbjct: 410 MRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCST 469

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           ++ GL   G+ ++A +L+ +     +A NVI F T+I+G  +I + ++  ELL +MKE +
Sbjct: 470 LLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELR 529

Query: 362 VMPDASIVSMVVD 374
             PD+     + D
Sbjct: 530 CPPDSLTYRTLFD 542



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 182/378 (48%), Gaps = 14/378 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALF--LQMKGENINP-----------DVVTYNSLIH 59
           +P+ V++  ++  L +      A+AL   L    E + P             V+++ L+ 
Sbjct: 97  RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLR 156

Query: 60  GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
               A   + A  +F  M   G +PS+ + N ++++L ++G    A+ +   M    V P
Sbjct: 157 AHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLP 216

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           + FT + +   +C  G++ +A E    ME MG + + V+Y+ +++ YC     E+A  + 
Sbjct: 217 DEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRIL 276

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTFIDGLCK 238
             +  KG+ P VVTY  L  G  +  ++E A ++ +EM+   D+  D   Y   I+G C+
Sbjct: 277 ESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQ 336

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
            G + +A  +   +      +++  YN +I+GLCK GR+E   ++ + +    +  D  +
Sbjct: 337 RGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYS 396

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           YN +I G C +G M KA ++   M  N +A   + + TL+ GF  ++     + L   M 
Sbjct: 397 YNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLML 456

Query: 359 EKKVMPDASIVSMVVDLL 376
           ++ V P+    S ++D L
Sbjct: 457 KRGVAPNEISCSTLLDGL 474



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 64/177 (36%), Positives = 102/177 (57%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY+++I G    G +D+A +L   M    + P+++TYNSLI+GLC +   + A  L
Sbjct: 733 PDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNL 792

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F ++  +G+ P+ +T+N ++DE CK GK  EA +L   MV+  ++P   TYS L+ G C 
Sbjct: 793 FNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCT 852

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            G +  A +L   M       + ++Y  LI+GY K+  +EE   LY EM  +G+ PT
Sbjct: 853 QGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 909



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 47/73 (64%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  +TY+ +I GLC +G++++A  L  QM   N++P+ +TY +LIHG   + +  E  +
Sbjct: 837 QPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISK 896

Query: 73  LFFEMMDQGVQPS 85
           L+ EM  +G+ P+
Sbjct: 897 LYDEMHIRGLLPT 909


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 175/306 (57%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +   ++I G CK G   KA  +   ++     PDV+TYN LI G+C    W +A++L
Sbjct: 117 PDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKL 176

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+ +G  PSVVTFN++++ LC+ G +  A  +L+ M +    PN+ +Y+ L+ GFC 
Sbjct: 177 LADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCK 236

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+ RA E  G M S GC  D V+YN L+   CK+ +V+ A+ L  ++ SKG  P ++T
Sbjct: 237 EKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLIT 296

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+  GL ++ + + A KL +EM+   +  D  TY++ + GL + G + EA++ F  L 
Sbjct: 297 YNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLE 356

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +L  + +   YN ++ GLCK+ + + A++    + +R       +Y I+I GL  +G   
Sbjct: 357 VLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAK 416

Query: 314 KAHDLF 319
           +A +L 
Sbjct: 417 EALELL 422



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 172/327 (52%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           PD++   SLI G C      +A R+   + D G  P V+T+NV++  +C  G+  +A +L
Sbjct: 117 PDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKL 176

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
           L  MV+R   P+  T++ L++  C  G + RA ++   M   GC  + +SYN L++G+CK
Sbjct: 177 LADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCK 236

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
            K++E A+    +M S+G  P +VTYNTL   L +  +V+ A++L  ++     +    T
Sbjct: 237 EKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLIT 296

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           YNT IDGL K G   +A +L   +     + DI  Y+ L+ GL + G+++ A++ F  L 
Sbjct: 297 YNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLE 356

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
              +  + +TYN ++ GLC   + D+A D    M +    P    +  LI G        
Sbjct: 357 VLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAK 416

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVDL 375
           + +ELL+++  + V+  +S   + V +
Sbjct: 417 EALELLNELCLRGVVKKSSAEKVAVRM 443



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 166/329 (50%)

Query: 48  NPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR 107
           N + +  N+ +  L    +  E  R    M+ +G  P ++    ++   CK GK  +A+R
Sbjct: 81  NFEEIESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATR 140

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
           +++++      P+  TY+ L+ G C TG+   AE+L   M   GC    V++NILIN  C
Sbjct: 141 IMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLC 200

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           +   +  A+ +  +M   G  P  ++YN L  G  +  ++E A++   +M       D  
Sbjct: 201 RKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIV 260

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           TYNT +  LCK+G +  AVEL   L    C   +  YN +IDGL K G+ + A +L   +
Sbjct: 261 TYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEM 320

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
             + L  D++TY+ ++ GL  +G++D+A   F D+E   V PN I +  ++ G  +  K 
Sbjct: 321 RAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKT 380

Query: 348 SKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            + I+ L  M ++   P  +  +++++ L
Sbjct: 381 DRAIDFLAYMVQRGCKPTEASYTILIEGL 409


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 208/397 (52%), Gaps = 36/397 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEAKR 72
           PN VTY  ++ G CK+G +++A+ +  +MK   +I  D V Y  +I+G C     ++A R
Sbjct: 286 PNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATR 345

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM D G+  ++  +N +++ LCK G+M+E  ++L  M    +RP+ ++Y+TL+DG+C
Sbjct: 346 VRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYC 405

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G + +A E+   M   G     ++YN L+ G+C    +++AL L+  M+ +G+ P  +
Sbjct: 406 REGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEI 465

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           + +TL  GLF+  + E AL L++E     +A +  T+NT I+GLCK G + EA EL   +
Sbjct: 466 SCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRM 525

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIA---------------LELFRS----------- 286
             L+C  D   Y  L DG CK G+L  A               +E+F S           
Sbjct: 526 KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQW 585

Query: 287 ---------LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
                    +  R L  ++VTY  +I G C +G + +A +L+ +M  N + PNV I   L
Sbjct: 586 HKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSAL 645

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +  F +  K  +   +L K+    ++P  SI ++ +D
Sbjct: 646 MSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEID 682



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 197/423 (46%), Gaps = 61/423 (14%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  +YNT+IDG C+EG + KA  +   M    +    +TYN+L+ G C  +  ++A R
Sbjct: 391 RPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALR 450

Query: 73  LFFEMMDQGVQPS-----------------------------------VVTFNVIMDELC 97
           L+F M+ +GV P+                                   V+TFN +++ LC
Sbjct: 451 LWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLC 510

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K G+M EA  LLD M +    P++ TY TL DG+C  G++  A  L   ME +G      
Sbjct: 511 KIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVE 570

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            +N  I G+   K+  +   ++ EM ++G+ P +VTY  L  G  +   +  A  L+ EM
Sbjct: 571 MFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEM 630

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEA---------VELFRTLGILKCELDIQA----- 263
             + +  +    +  +    K G + EA         +++     I   E+D  +     
Sbjct: 631 VNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDT 690

Query: 264 ------------YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                       +N +I GLCKSGR+  A  LF SL  +  + D  TY+ +IHG    G 
Sbjct: 691 IADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGS 750

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A  L   M    + PN+I + +LI+G  +  K S+ + L +K++ K + P+    + 
Sbjct: 751 IDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNT 810

Query: 372 VVD 374
           ++D
Sbjct: 811 LID 813



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 198/373 (53%), Gaps = 3/373 (0%)

Query: 3   NGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC 62
           +G G++G  C+P+  + N +++ L + G    A  ++ QM+   + PD  T   +    C
Sbjct: 172 DGMGKVG--CRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYC 229

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
                 +A     EM   G++ ++V ++ +MD  C  G  ++A R+L+ + ++ + PN  
Sbjct: 230 RDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVV 289

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYRE 181
           TY+ L+ G+C  G++  AE +   M+  G    D+V+Y ++INGYC+   +++A  +  E
Sbjct: 290 TYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNE 349

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M   GI   +  YNT+  GL ++ ++E   K+ +EM+   +  D  +YNT IDG C+ G 
Sbjct: 350 MRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGS 409

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           + +A E+ R +           YN L+ G C    ++ AL L+  + +R +  + ++ + 
Sbjct: 410 MRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCST 469

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           ++ GL   G+ ++A +L+ +     +A NVI F T+I+G  +I + ++  ELL +MKE +
Sbjct: 470 LLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELR 529

Query: 362 VMPDASIVSMVVD 374
             PD+     + D
Sbjct: 530 CPPDSLTYRTLFD 542



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 172/369 (46%), Gaps = 25/369 (6%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+++TY T+ DG CK G +  A  L  +M+     P V  +NS I G   A  W++  
Sbjct: 530 CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVN 589

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  EM  +G+ P++VT+  ++   CK G + EA  L   MV   + PN F  S LM  F
Sbjct: 590 DIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCF 649

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GK++ A  +   +         V+ +++        E+++   +   +         
Sbjct: 650 YKEGKVDEANLVLQKL---------VNIDMIPGCSISTIEIDKISHVVDTIADGNPHSAN 700

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V +N +  GL +  ++  A  LFE ++      D  TY++ I G   +G I EA  L   
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDV 760

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       +I  YN LI GLCKSG+L  A+ LF  L  + +  + +TYN +I   C +G+
Sbjct: 761 MLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGK 820

Query: 312 ----------------MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
                           M++A  L   M EN V PN I + TLIHG+++     ++ +L  
Sbjct: 821 TTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYD 880

Query: 356 KMKEKKVMP 364
           +M  + ++P
Sbjct: 881 EMHIRGLLP 889



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 182/378 (48%), Gaps = 14/378 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALF--LQMKGENINP-----------DVVTYNSLIH 59
           +P+ V++  ++  L +      A+AL   L    E + P             V+++ L+ 
Sbjct: 97  RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLR 156

Query: 60  GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
               A   + A  +F  M   G +PS+ + N ++++L ++G    A+ +   M    V P
Sbjct: 157 AHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLP 216

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           + FT + +   +C  G++ +A E    ME MG + + V+Y+ +++ YC     E+A  + 
Sbjct: 217 DEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRIL 276

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR-DDVAADTSTYNTFIDGLCK 238
             +  KG+ P VVTY  L  G  +  ++E A ++ +EM+   D+  D   Y   I+G C+
Sbjct: 277 ESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQ 336

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
            G + +A  +   +      +++  YN +I+GLCK GR+E   ++ + +    +  D  +
Sbjct: 337 RGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYS 396

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           YN +I G C +G M KA ++   M  N +A   + + TL+ GF  ++     + L   M 
Sbjct: 397 YNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLML 456

Query: 359 EKKVMPDASIVSMVVDLL 376
           ++ V P+    S ++D L
Sbjct: 457 KRGVAPNEISCSTLLDGL 474


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 184/353 (52%), Gaps = 3/353 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           NT +YN ++  LC  G +  A  LF +M      PDVVTY  ++HG C  ++   A +L 
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLL 308

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM  +G++ + V +  ++  LC  G++ +A R+++ MV   V  +A  ++T+M GFC  
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +  A   F  M+  G   D V+Y  LING C+  E++EA  + +EM  KG+    VTY
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  G  ++ ++  A  +  +M +  V  +  TY    DGLCK G +  A EL   +  
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              EL+I  YN LI+GLCK+G LE A+     +    L  DV TY  +I  LC   ++D+
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           AH L  +M +  + P ++ +  L++GF    +      LL  M EK + P+ +
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTT 601



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 182/361 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +   + T++ G C++G +  A+  F +M+   +  D VTY +LI+GLC A +  EA+R+ 
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVL 413

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM D+G+    VT+ V++D  CK GKM EA  + + MVQ+ V PN  TY+ L DG C  
Sbjct: 414 QEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQ 473

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +  A EL   M S G + +  +YN LING CK   +E+A+    +M   G+KP V TY
Sbjct: 474 GDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTY 533

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            T+   L +  +++ A  L +EM    +     TYN  ++G C +G +     L   +  
Sbjct: 534 TTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLE 593

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                +   YN L+   C    ++   E+++ +  + +V +  TYNI+I G C    M +
Sbjct: 594 KNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKE 653

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A     +M E         +  LI    +  K ++   L  KM+++++  +  + +  +D
Sbjct: 654 ALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYID 713

Query: 375 L 375
           L
Sbjct: 714 L 714



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 179/360 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY  ++ G C    ++ A  L  +M    +  + V Y S+I  LC     ++A R+
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRV 342

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+  GV      F  +M   C+ G +  A    D M +R +  +  TY+ L++G C 
Sbjct: 343 VEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCR 402

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  AE +   ME  G   D V+Y +LI+GYCK  ++ EA  ++ +MV K + P VVT
Sbjct: 403 AGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVT 462

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +   V  A +L  EM    +  +  TYN+ I+GLCK G + +A+     + 
Sbjct: 463 YTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMD 522

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+  Y  +I  LC+S  L+ A  L + +  + +   +VTYN++++G C  G+++
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
               L   M E  + PN   + +L+  +          E+   M  ++V+P+ +  ++++
Sbjct: 583 GGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 141/256 (55%), Gaps = 35/256 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR- 72
           PN VTY  + DGLCK+G V  A  L  +M  + +  ++ TYNSLI+GLC A +  +A R 
Sbjct: 458 PNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRT 517

Query: 73  ----------------------------------LFFEMMDQGVQPSVVTFNVIMDELCK 98
                                             L  EM+D+G++P++VT+NV+M+  C 
Sbjct: 518 MIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCM 577

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           +G+++   RLL+ M+++++ PN  TY++LM  +C+   +    E++  M S     ++ +
Sbjct: 578 SGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENT 637

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YNILI G+CK + ++EAL  + EM+ KG + T  +YN L   L +  +   A +LFE+M+
Sbjct: 638 YNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMR 697

Query: 219 RDDVAADTSTYNTFID 234
           ++ + A+   YN +ID
Sbjct: 698 KERLTAEPDVYNFYID 713



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 171/362 (47%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V Y ++I  LC EG V  A  +   M    +  D   + +++ G C   D   A+  F
Sbjct: 319 NPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF 378

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM  +G+    VT+  +++ LC+ G++ EA R+L  M  + +  +A TY+ L+DG+C  
Sbjct: 379 DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK+  A  +   M       + V+Y  L +G CK  +V  A  L  EM SKG++  + TY
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N+L  GL +   +E A++   +M    +  D  TY T I  LC++  +  A  L + +  
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              +  I  YN L++G C SGR+E    L   +  + +  +  TYN ++   C +  M  
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +++  M    V PN   +  LI G  +     + +    +M EK     AS  + ++ 
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIR 678

Query: 375 LL 376
           LL
Sbjct: 679 LL 680



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 168/342 (49%), Gaps = 11/342 (3%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
           +  L L+++   I+P   + N+++  L      +EA +LF E+ ++    +  ++N+++ 
Sbjct: 210 SAPLLLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELPEK----NTCSYNILLK 261

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            LC  G++ +A +L D M      P+  TY  ++ G+C   ++  A +L   M + G + 
Sbjct: 262 ALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLEL 318

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           + V+Y  +I   C   +V +A+ +  +MV  G+      + T+  G      +  A   F
Sbjct: 319 NPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF 378

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           +EMQ+  +AAD  TY   I+GLC+ G + EA  + + +     ++D   Y  LIDG CK 
Sbjct: 379 DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G++  A  +   + ++ +  +VVTY  +  GLC  G +  A++L  +M    +  N+  +
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +LI+G  +     + +  +  M E  + PD    + ++  L
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 79/171 (46%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VTYN +++G C  G V+  K L   M  +NI+P+  TYNSL+   C   +      
Sbjct: 562 KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++  M+ Q V P+  T+N+++   CK   M EA      M+++  R  A +Y+ L+    
Sbjct: 622 IYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLN 681

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
              K   A  LF  M       +   YN  I+       +E  L+L  E+V
Sbjct: 682 KKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 189/359 (52%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G+  KPN V+YNTII G    G ++ A+ +   M+ + I PD  TY SLI G+C      
Sbjct: 255 GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 314

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  LF +M++ G+ P+ VT+N ++D  C  G ++ A    D MV++ + P+  TY+ L+
Sbjct: 315 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 374

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
               + G++  A+++   M   G   D ++YNILINGY +    ++A  L+ EM+SKGI+
Sbjct: 375 HALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIE 434

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           PT VTY +L   L   ++++ A  LFE++    V+ D   +N  +DG C NG +  A  L
Sbjct: 435 PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFML 494

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            + +       D   +N L+ G C+ G++E A  L   + RR +  D ++YN +I G   
Sbjct: 495 LKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGR 554

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            G +  A  +  +M      P ++ +  LI    +  +     ELL +M  K + PD S
Sbjct: 555 RGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDS 613



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 186/359 (51%), Gaps = 2/359 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E G+V  P   T N ++    K   ++ A  L+ +M    I+  V T+N +++ LC    
Sbjct: 185 EKGIV--PKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 242

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A+     M   G +P+VV++N I+      G ++ A R+LD M  + + P+++TY +
Sbjct: 243 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 302

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ G C  G++  A  LF  M  +G   + V+YN LI+GYC   ++E A S   EMV KG
Sbjct: 303 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 362

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I P+V TYN L   LF   ++  A  + +EM++  +  D  TYN  I+G  + G   +A 
Sbjct: 363 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 422

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +L   +     E     Y  LI  L +  R++ A +LF  +  + +  DV+ +N M+ G 
Sbjct: 423 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGH 482

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           C +G +++A  L  +M+  +V P+ + F TL+ G  R  K  +   LL +MK + + PD
Sbjct: 483 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPD 541



 Score =  167 bits (422), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 172/354 (48%), Gaps = 6/354 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +++ ++ ++   C+    D+A   F  MK + I P + T N ++      N    A  L+
Sbjct: 156 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 215

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM    +  +V TFN++++ LCK GK+ +A   +  M     +PN  +Y+T++ G+   
Sbjct: 216 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 275

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G I  A  +  +M   G + D  +Y  LI+G CK   +EEA  L+ +MV  G+ P  VTY
Sbjct: 276 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 335

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA---VELFRT 251
           NTL  G      +E A    +EM +  +    STYN  +  L   G + EA   ++  R 
Sbjct: 336 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 395

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
            GI+    D   YN LI+G  + G  + A +L   +  + +    VTY  +I+ L    +
Sbjct: 396 KGIIP---DAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 452

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           M +A DLF  + +  V+P+VI+F  ++ G        +   LL +M  K V PD
Sbjct: 453 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPD 506



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 133/231 (57%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TYN +I+G  + G   KA  L  +M  + I P  VTY SLI+ L   N   EA  L
Sbjct: 400 PDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDL 459

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +++DQGV P V+ FN ++D  C NG ++ A  LL  M ++ V P+  T++TLM G C 
Sbjct: 460 FEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCR 519

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A  L   M+  G K D +SYN LI+GY +  ++++A  +  EM+S G  PT++T
Sbjct: 520 EGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLT 579

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           YN L   L +  + + A +L +EM    ++ D STY + I+G+     +VE
Sbjct: 580 YNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 630



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 120/236 (50%), Gaps = 1/236 (0%)

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
           +EL  S + +  K   + +++L+   C+ +  +EA   +  M  KGI P + T N +   
Sbjct: 143 DELTLSRDRLSVK-SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSL 201

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
             +++++E A  L+ EM R  +++   T+N  ++ LCK G + +A E    +  L  + +
Sbjct: 202 FLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPN 261

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           + +YN +I G    G +E A  +  ++  + +  D  TY  +I G+C +G++++A  LF 
Sbjct: 262 VVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFD 321

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            M E  + PN + + TLI G+       +      +M +K +MP  S  +++V  L
Sbjct: 322 KMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 377



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 129/290 (44%), Gaps = 35/290 (12%)

Query: 85  SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELF 144
           S + F++++   C+  + DEA +   +M ++ + P   T + ++  F    ++  A  L+
Sbjct: 156 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 215

Query: 145 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 204
             M  +       ++NI++N  CK  ++++A      M   G KP VV+YN         
Sbjct: 216 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYN--------- 266

Query: 205 HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
                                     T I G    G I  A  +   + +   E D   Y
Sbjct: 267 --------------------------TIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 300

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
             LI G+CK GRLE A  LF  +    LV + VTYN +I G CN G +++A     +M +
Sbjct: 301 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 360

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             + P+V  +  L+H      +  +  +++ +M++K ++PDA   +++++
Sbjct: 361 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 410


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 184/353 (52%), Gaps = 3/353 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           NT +YN ++  LC  G +  A  LF +M      PDVVTY  ++HG C  ++   A +L 
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLL 308

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM  +G++ + V +  ++  LC  G++ +A R+++ MV   V  +A  ++T+M GFC  
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +  A   F  M+  G   D V+Y  LING C+  E++EA  + +EM  KG+    VTY
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  G  ++ ++  A  +  +M +  V  +  TY    DGLCK G +  A EL   +  
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              EL+I  YN LI+GLCK+G LE A+     +    L  DV TY  +I  LC   ++D+
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           AH L  +M +  + P ++ +  L++GF    +      LL  M EK + P+ +
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTT 601



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 182/361 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +   + T++ G C++G +  A+  F +M+   +  D VTY +LI+GLC A +  EA+R+ 
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVL 413

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM D+G+    VT+ V++D  CK GKM EA  + + MVQ+ V PN  TY+ L DG C  
Sbjct: 414 QEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQ 473

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +  A EL   M S G + +  +YN LING CK   +E+A+    +M   G+KP V TY
Sbjct: 474 GDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTY 533

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            T+   L +  +++ A  L +EM    +     TYN  ++G C +G +     L   +  
Sbjct: 534 TTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLE 593

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                +   YN L+   C    ++   E+++ +  + +V +  TYNI+I G C    M +
Sbjct: 594 KNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKE 653

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A     +M E         +  LI    +  K ++   L  KM+++++  +  + +  +D
Sbjct: 654 ALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYID 713

Query: 375 L 375
           L
Sbjct: 714 L 714



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 179/360 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY  ++ G C    ++ A  L  +M    +  + V Y S+I  LC     ++A R+
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRV 342

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+  GV      F  +M   C+ G +  A    D M +R +  +  TY+ L++G C 
Sbjct: 343 VEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCR 402

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  AE +   ME  G   D V+Y +LI+GYCK  ++ EA  ++ +MV K + P VVT
Sbjct: 403 AGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVT 462

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +   V  A +L  EM    +  +  TYN+ I+GLCK G + +A+     + 
Sbjct: 463 YTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMD 522

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+  Y  +I  LC+S  L+ A  L + +  + +   +VTYN++++G C  G+++
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
               L   M E  + PN   + +L+  +          E+   M  ++V+P+ +  ++++
Sbjct: 583 GGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 141/256 (55%), Gaps = 35/256 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR- 72
           PN VTY  + DGLCK+G V  A  L  +M  + +  ++ TYNSLI+GLC A +  +A R 
Sbjct: 458 PNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRT 517

Query: 73  ----------------------------------LFFEMMDQGVQPSVVTFNVIMDELCK 98
                                             L  EM+D+G++P++VT+NV+M+  C 
Sbjct: 518 MIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCM 577

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           +G+++   RLL+ M+++++ PN  TY++LM  +C+   +    E++  M S     ++ +
Sbjct: 578 SGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENT 637

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YNILI G+CK + ++EAL  + EM+ KG + T  +YN L   L +  +   A +LFE+M+
Sbjct: 638 YNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMR 697

Query: 219 RDDVAADTSTYNTFID 234
           ++ + A+   YN +ID
Sbjct: 698 KERLTAEPDVYNFYID 713



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 171/362 (47%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V Y ++I  LC EG V  A  +   M    +  D   + +++ G C   D   A+  F
Sbjct: 319 NPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF 378

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM  +G+    VT+  +++ LC+ G++ EA R+L  M  + +  +A TY+ L+DG+C  
Sbjct: 379 DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK+  A  +   M       + V+Y  L +G CK  +V  A  L  EM SKG++  + TY
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N+L  GL +   +E A++   +M    +  D  TY T I  LC++  +  A  L + +  
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              +  I  YN L++G C SGR+E    L   +  + +  +  TYN ++   C +  M  
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +++  M    V PN   +  LI G  +     + +    +M EK     AS  + ++ 
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIR 678

Query: 375 LL 376
           LL
Sbjct: 679 LL 680



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 168/342 (49%), Gaps = 11/342 (3%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
           +  L L+++   I+P   + N+++  L      +EA +LF E+ ++    +  ++N+++ 
Sbjct: 210 SAPLLLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELPEK----NTCSYNILLK 261

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            LC  G++ +A +L D M      P+  TY  ++ G+C   ++  A +L   M + G + 
Sbjct: 262 ALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLEL 318

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           + V+Y  +I   C   +V +A+ +  +MV  G+      + T+  G      +  A   F
Sbjct: 319 NPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF 378

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           +EMQ+  +AAD  TY   I+GLC+ G + EA  + + +     ++D   Y  LIDG CK 
Sbjct: 379 DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G++  A  +   + ++ +  +VVTY  +  GLC  G +  A++L  +M    +  N+  +
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +LI+G  +     + +  +  M E  + PD    + ++  L
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 79/171 (46%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VTYN +++G C  G V+  K L   M  +NI+P+  TYNSL+   C   +      
Sbjct: 562 KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++  M+ Q V P+  T+N+++   CK   M EA      M+++  R  A +Y+ L+    
Sbjct: 622 IYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLN 681

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
              K   A  LF  M       +   YN  I+       +E  L+L  E+V
Sbjct: 682 KKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 191/398 (47%), Gaps = 35/398 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN--- 68
           C  N V YN +IDGLCK+  V +A  +   + G+ + PDVVTY +L+ GLC   ++    
Sbjct: 258 CDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGL 317

Query: 69  --------------------------------EAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
                                           EA  L   + + GV P++  +N ++D L
Sbjct: 318 EMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSL 377

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           CK    DEA  L D M +  + PN  TYS L+D FC  GK++ A    G M  MG K   
Sbjct: 378 CKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSV 437

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
             YN LING+CK  ++  A SL  EM++K ++PTVVTY +L  G     ++  AL+L+ E
Sbjct: 438 YPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M    +     T+ T + GL + G I +AV+LF  +     + +   YN +I+G C+ G 
Sbjct: 498 MTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGN 557

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +  A E    +  + +V D  +Y  +IHGLC  GQ  +A      + +     N I +  
Sbjct: 558 MSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           L+HGF R  K  + + +   M  + V  D     +++D
Sbjct: 618 LLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLID 655



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 2/371 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G+IG+   PN VTY+ +ID  C+ G +D A +   +M    + P V  YNSLI+G C   
Sbjct: 394 GKIGLC--PNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFG 451

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
           D + A+ L  EM+++ ++P+VVT+  +M   C  GK+++A RL   M  + + P+ +T++
Sbjct: 452 DISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFT 511

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+ G    G I  A +LF  M     K + V+YN++I GYC+   + +A     EM+ K
Sbjct: 512 TLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEK 571

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           GI P   +Y  L  GL    Q   A    + + + +   +   Y   + G C+ G + EA
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           + + + +G+   +LD+  Y  LIDG  K    ++ L L + +  R L  D V Y  MI  
Sbjct: 632 LSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDA 691

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
               G   +A  ++  M      PN + +  +I+G  +    ++   L  KM+    +P+
Sbjct: 692 KSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPN 751

Query: 366 ASIVSMVVDLL 376
                  +D+L
Sbjct: 752 QVTYGCFLDIL 762



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 201/424 (47%), Gaps = 70/424 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VTY +++ G C +G ++KA  L+ +M G+ I P + T+ +L+ GL  A    +A +
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVK 528

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM +  V+P+ VT+NV+++  C+ G M +A   L+ M+++ + P+ ++Y  L+ G C
Sbjct: 529 LFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLC 588

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           LTG+ + A+     +    C+ +++ Y  L++G+C+  ++EEALS+ ++M  +G+   +V
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLV 648

Query: 193 TYNTL------------FLGLF-EIHQ----------------------VEHALKLFEEM 217
            Y  L            FLGL  E+H                        + A  +++ M
Sbjct: 649 CYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG---------ILKCELDI------- 261
             +    +  TY   I+GLCK G++ EA  L   +             C LDI       
Sbjct: 709 INEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGD 768

Query: 262 -------------------QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
                                YN LI G C+ GR+E A EL   +    +  D +TY  M
Sbjct: 769 MKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTM 828

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I  LC    + KA +L+  M E  + P+ + + TLIHG     +  K  EL ++M  + +
Sbjct: 829 ISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888

Query: 363 MPDA 366
            P+ 
Sbjct: 889 KPNT 892



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 177/371 (47%), Gaps = 2/371 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
            E GV   PN   YN +ID LCK    D+A+ LF +M    + P+ VTY+ LI   C   
Sbjct: 359 AEFGV--SPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRG 416

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             + A     EM+D G++PSV  +N +++  CK G +  A  L+  M+ + + P   TY+
Sbjct: 417 KLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYT 476

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           +LM G+C  GKIN+A  L+  M   G      ++  L++G  +   + +A+ L+ EM   
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEW 536

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            +KP  VTYN +  G  E   +  A +   EM    +  DT +Y   I GLC  G   EA
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEA 596

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
                 L    CEL+   Y  L+ G C+ G+LE AL + + +  R +  D+V Y ++I G
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDG 656

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
                       L  +M +  + P+ +I+ ++I    +     +   +   M  +  +P+
Sbjct: 657 SLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716

Query: 366 ASIVSMVVDLL 376
               + V++ L
Sbjct: 717 EVTYTAVINGL 727



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 173/361 (47%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   T + ++ GL K      A  LF  M    I PDV  Y  +I  LC   D + AK +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   G   ++V +NV++D LCK  K+ EA  +   +  ++++P+  TY TL+ G C 
Sbjct: 250 IVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCK 309

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +     E+   M  +     + + + L+ G  K  +VEEAL+L + +   G+ P +  
Sbjct: 310 VQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFV 369

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L   L +    + A  LF+ M +  +  +  TY+  ID  C+ G +  A+     + 
Sbjct: 370 YNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMI 429

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  +  +  YN LI+G CK G +  A  L   +  + L   VVTY  ++ G C+ G+++
Sbjct: 430 DMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA  L+ +M    + P++  F TL+ G  R       ++L  +M E  V P+    ++++
Sbjct: 490 KALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMI 549

Query: 374 D 374
           +
Sbjct: 550 E 550



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 73  LFFEMMDQGVQ--PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           L F+MM   V   P V T + ++  L K      A  L D M+   +RP+ + Y+ ++  
Sbjct: 177 LVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRS 236

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C    ++RA+E+   ME+ GC  + V YN+LI+G CK ++V EA+ + +++  K +KP 
Sbjct: 237 LCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPD 296

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQR------------------------------- 219
           VVTY TL  GL ++ + E  L++ +EM R                               
Sbjct: 297 VVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVK 356

Query: 220 ----DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG-ILKCELDIQAYNCLIDGLCKS 274
                 V+ +   YN  ID LCK     EA  LF  +G I  C  D+  Y+ LID  C+ 
Sbjct: 357 RVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDV-TYSILIDMFCRR 415

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G+L+ AL     +    L   V  YN +I+G C  G +  A  L  +M    + P V+ +
Sbjct: 416 GKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTY 475

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +L+ G+    K +K + L H+M  K ++P 
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIVPS 506



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 142/293 (48%), Gaps = 2/293 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N + Y  ++ G C+EG +++A ++   M    ++ D+V Y  LI G     D     
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFL 667

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM D+G++P  V +  ++D   K G   EA  + DLM+     PN  TY+ +++G 
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN-KEVEEALSLYREMVSKGIKPT 190
           C  G +N AE L   M       + V+Y   ++   K   ++++A+ L+  ++ KG+   
Sbjct: 728 CKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAIL-KGLLAN 786

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             TYN L  G     ++E A +L   M  D V+ D  TY T I  LC+   + +A+EL+ 
Sbjct: 787 TATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWN 846

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           ++       D  AYN LI G C +G +  A EL   + R+ L  +  T    I
Sbjct: 847 SMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 147/322 (45%), Gaps = 21/322 (6%)

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD--ELCKNGKMDEASRLLDLMVQ 114
           LIH L  AN +  A  L   ++ + ++PS V F+ +    E CK      +S   DL++Q
Sbjct: 110 LIHALVQANLFWPASSLLQTLLLRALKPSEV-FDALFSCYEKCKL----SSSSSFDLLIQ 164

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
             VR        ++DG  +   +     L   + ++         + L++G  K +    
Sbjct: 165 HYVRSR-----RVLDGVLVFKMMMTKVSLLPEVRTL---------SALLHGLVKFRHFGL 210

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           A+ L+ +M++ GI+P V  Y  +   L E+  +  A ++  +M+      +   YN  ID
Sbjct: 211 AMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLID 270

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
           GLCK   + EAV + + L   + + D+  Y  L+ GLCK    E+ LE+   + R     
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSP 330

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
                + ++ GL   G++++A +L   + E  V+PN+ ++  LI    +     +   L 
Sbjct: 331 SEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLF 390

Query: 355 HKMKEKKVMPDASIVSMVVDLL 376
            +M +  + P+    S+++D+ 
Sbjct: 391 DRMGKIGLCPNDVTYSILIDMF 412



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 47/81 (58%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           IG    P+ +TY T+I  LC+   V KA  L+  M  + I PD V YN+LIHG C A + 
Sbjct: 814 IGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEM 873

Query: 68  NEAKRLFFEMMDQGVQPSVVT 88
            +A  L  EM+ QG++P+  T
Sbjct: 874 GKATELRNEMLRQGLKPNTET 894


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 199/357 (55%), Gaps = 5/357 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH---ANDWNE 69
           +PN  T+N +I+ LCK G ++KA+ +   MK    +P+VV+YN+LI G C         +
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYK 279

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +  EM++  V P++ TFN+++D   K+  +  + ++   M+ +DV PN  TY++L++
Sbjct: 280 ADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLIN 339

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C  GKIN A  +   M S G + + ++Y+ LING+CKN  ++EAL ++  +  +G +P
Sbjct: 340 GLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRP 399

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           T   YN L     ++ +++    L EEM+R+ +  D  TYN  I GLC+NG I  A +LF
Sbjct: 400 TTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF 459

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             L   K   D+  ++ L++G C  G    A  L + + +  L    +TYNIM+ G C +
Sbjct: 460 DQL-TNKGLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKE 518

Query: 310 GQMDKAHDLFLDME-ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           G +  A ++   ME E  +  NV  +  L+ G+ +  K      LL++M EK ++P+
Sbjct: 519 GNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575



 Score =  200 bits (509), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 109/325 (33%), Positives = 184/325 (56%), Gaps = 5/325 (1%)

Query: 14  PNTVTYNTIIDGLCK---EGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           PN V+YNT+IDG CK    G + KA A+  +M    ++P++ T+N LI G    ++   +
Sbjct: 256 PNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGS 315

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            ++F EM+DQ V P+V+T+N +++ LC  GK++EA  + D MV   V+PN  TY +L++G
Sbjct: 316 LKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLING 375

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC  G +  A ++F S++  G +     YN+LI+ YCK  ++++  +L  EM  +GI P 
Sbjct: 376 FCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPD 435

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V TYN L  GL     +E A KLF+++    +  D  T++  ++G C  G   +A  L +
Sbjct: 436 VGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLK 494

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR-RVLVADVVTYNIMIHGLCND 309
            +  +  +     YN ++ G CK G L+ A  +   + + R L  +V +YN+++ G    
Sbjct: 495 EMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQK 554

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIF 334
           G+++ A+ L  +M E  + PN I +
Sbjct: 555 GKLEDANMLLNEMLEKGLVPNRITY 579



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 188/389 (48%), Gaps = 52/389 (13%)

Query: 21  TIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG---LCHANDWNEAKRLFFEM 77
           + +DG  + G   +  ++F  +       D V  NS+I     L +AN  N    L FE 
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAIS----MCDNVCVNSIIADMLVLAYAN--NSRFELGFEA 175

Query: 78  MDQ----GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +    G + S ++   +M  L K  +  +   L   M++R ++PN FT++ +++  C 
Sbjct: 176 FKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCK 235

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCK---NKEVEEALSLYREMVSKGIKPT 190
           TGK+N+A ++   M+  G   + VSYN LI+GYCK   N ++ +A ++ +EMV   + P 
Sbjct: 236 TGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPN 295

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL-- 248
           + T+N L  G ++   +  +LK+F+EM   DV  +  TYN+ I+GLC  G I EA+ +  
Sbjct: 296 LTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRD 355

Query: 249 --------------------FRTLGILKCELDI-------------QAYNCLIDGLCKSG 275
                               F   G++K  LD+             + YN LID  CK G
Sbjct: 356 KMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLG 415

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           +++    L   + R  +V DV TYN +I GLC +G ++ A  LF D   N   P+++ F 
Sbjct: 416 KIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF-DQLTNKGLPDLVTFH 474

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            L+ G+    +  K   LL +M +  + P
Sbjct: 475 ILMEGYCSRGESRKAAMLLKEMSKMGLKP 503



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 122/231 (52%), Gaps = 2/231 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +TY+++I+G CK G + +A  +F  +KG+   P    YN LI   C     ++   
Sbjct: 363 QPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFA 422

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  +G+ P V T+N ++  LC+NG ++ A +L D +  + + P+  T+  LM+G+C
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYC 481

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM-VSKGIKPTV 191
             G+  +A  L   M  MG K   ++YNI++ GYCK   ++ A ++  +M   + ++  V
Sbjct: 482 SRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNV 541

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
            +YN L  G  +  ++E A  L  EM    +  +  TY    + +   G++
Sbjct: 542 ASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFV 592



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 161/343 (46%), Gaps = 9/343 (2%)

Query: 38  LFLQMKGENINPDV-VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVT-FNVIMDE 95
           LF Q+    +NPD+ + Y +    L    D + +  L F+++         +     +D 
Sbjct: 70  LFRQLISSELNPDLCLRYYTW---LVKNRDISVSLELTFKLLHSLANAKRYSKIRSFLDG 126

Query: 96  LCKNGKMDEASRLLDLMVQRD-VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
             +NG   +   +   +   D V  N+     L+  +    +     E F      G K 
Sbjct: 127 FVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKL 186

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
             +S   L+    K     +   LY+EM+ + I+P V T+N +   L +  ++  A  + 
Sbjct: 187 SAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVM 246

Query: 215 EEMQRDDVAADTSTYNTFIDGLCK---NGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           E+M+    + +  +YNT IDG CK   NG + +A  + + +   +   ++  +N LIDG 
Sbjct: 247 EDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGF 306

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
            K   L  +L++F+ +  + ++ +V+TYN +I+GLCN G++++A  +   M    V PN+
Sbjct: 307 WKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNL 366

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           I + +LI+GF +     + +++   +K +   P   + +M++D
Sbjct: 367 ITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLID 409


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 110/316 (34%), Positives = 172/316 (54%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           PD +TY  ++  LC     ++A     EM  +G++P    +N ++  LC+  K++EA  L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
            + MV++ + PN  TY+TL++G C   +I  A ELF  M   G    +VSYN LI+G+CK
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
            K++  A  ++ +MV     P VVTY TL  GL +  +V+ A ++ + M +  V  + +T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           Y+  IDG CK   + EA +L   +        +  YN L++ LC++ +LE A +LFR + 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
           +R     VVTYN ++  LC+  Q+D AH L+ +M      P+ I + TL  G  R  K  
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVH 306

Query: 349 KVIELLHKMKEKKVMP 364
           +  EL+ KMK  K  P
Sbjct: 307 EAQELMEKMKLTKRNP 322



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 104/275 (37%), Positives = 155/275 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+   YN ++ GLC+E  V++A+ LF +M  + INP+VVTYN+LI+GLC A     A  
Sbjct: 41  KPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYE 100

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  +G  P+ V++N ++D  CK   +  A  + D MV+ +  PN  TY+TL+DG  
Sbjct: 101 LFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLS 160

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +GK+  A E+   M   G   +  +Y+ LI+G+CK + V+EA  L  +MV++GI PTVV
Sbjct: 161 KSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVV 220

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L   L    ++E A KLF  M +        TYNT +  LC +  +  A  L+  +
Sbjct: 221 TYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEM 280

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
               C  D   Y+ L  GL ++G++  A EL   +
Sbjct: 281 IAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315



 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 166/310 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TY  I++ LCK   +D A A   +M    I PD   YN ++ GLC      EA+ L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+ Q + P+VVT+N +++ LCK  +++ A  L   M  +   P   +Y+TL+DGFC 
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +  A+++F  M    C  + V+Y  LI+G  K+ +V+ A  +   MV KG+ P V T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  G  ++ +V+ A KL E+M    +A    TYN  ++ LC+   + +A +LFR + 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +C   +  YN L+  LC   +L+ A  L+  +  +    D +TY+ +  GL   G++ 
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVH 306

Query: 314 KAHDLFLDME 323
           +A +L   M+
Sbjct: 307 EAQELMEKMK 316



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 98/243 (40%), Positives = 142/243 (58%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTYNT+I+GLCK   ++ A  LF +M G+   P  V+YN+LI G C   D   AK +
Sbjct: 77  PNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDV 136

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+     P+VVT+  ++D L K+GK+  A+ +LD MV++ V PN  TYS L+DGFC 
Sbjct: 137 FDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCK 196

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +++ A +L   M + G     V+YNIL+N  C+  ++E+A  L+R M  +   PTVVT
Sbjct: 197 VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVT 256

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL   L    Q++ A +L+ EM       D  TY+T   GL + G + EA EL   + 
Sbjct: 257 YNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 316

Query: 254 ILK 256
           + K
Sbjct: 317 LTK 319



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 123/225 (54%), Gaps = 6/225 (2%)

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D ++Y  ++   CK K +++AL+   EM ++GIKP    YN +  GL +  +VE A  LF
Sbjct: 8   DALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLF 67

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGL 271
           E+M +  +  +  TYNT I+GLCK   I  A ELF+ +   G +  E+   +YN LIDG 
Sbjct: 68  EKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEV---SYNTLIDGF 124

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           CK   L  A ++F  + R   V +VVTY  +I GL   G++  A ++   M +  V PNV
Sbjct: 125 CKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNV 184

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +  LI GF ++ +  +  +LL +M  + + P     +++++ L
Sbjct: 185 ATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSL 229



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 98/171 (57%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY T+IDGL K G V  A  +   M  + + P+V TY+ LI G C     +EA 
Sbjct: 145 CVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAH 204

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  +M+ QG+ P+VVT+N++++ LC+  K+++A +L   M QR   P   TY+TL+   
Sbjct: 205 KLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRAL 264

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           C   +++ A  L+  M + GC  D ++Y+ L  G  +  +V EA  L  +M
Sbjct: 265 CHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 94/186 (50%)

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  +TY  +   L +  +++ AL   EEM    +  D   YN  + GLC+   + EA  L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +   +   ++  YN LI+GLCK+ R+E A ELF+ +  +  V   V+YN +I G C 
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
              +  A D+F  M  +   PNV+ + TLI G  +  K     E+L  M +K V P+ + 
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 369 VSMVVD 374
            S ++D
Sbjct: 187 YSCLID 192


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 181/357 (50%), Gaps = 5/357 (1%)

Query: 11  VCKP--NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
            C P    V Y  + DG C+ G +  A+ +   + G  + P+  TYN LIH LC      
Sbjct: 128 ACGPAATVVAYGALTDGYCRAGRLGDARRV---VGGMPVQPNAYTYNPLIHTLCERGQVR 184

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  +  +M+ +G  P VVT+N++++  CK     +A  L+DLM      PN  TY+ LM
Sbjct: 185 DALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLM 244

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C  G ++ A EL  ++ S GCK   V+YN ++ G C  +   +A  L  EM+ +   
Sbjct: 245 DGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCP 304

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P   T+N +   L     ++ A++L E+M +    A+  TYN  I+GLC+   +  A+ L
Sbjct: 305 PNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGL 364

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +    C+ DI  YN L+ GLC + +   A EL  ++ +   + D VT+N +I  LC 
Sbjct: 365 LSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQ 424

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            G M  A ++F  M +    PN I + T+I G  +  K  + +EL ++M  K   PD
Sbjct: 425 KGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD 481



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 191/392 (48%), Gaps = 36/392 (9%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G+  +PN  TYN +I  LC+ G V  A ++   M      PDVVTYN L+   C    + 
Sbjct: 160 GMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYR 219

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  L   M  +G  P+ VT+NV+MD +C  G +D+A  LL  +     +P+   Y+T++
Sbjct: 220 QAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVL 279

Query: 129 DGFCLT-----------------------------------GKINRAEELFGSMESMGCK 153
            G C                                     G + +A +L   M   GC 
Sbjct: 280 KGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCT 339

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            + V+YN +ING C+ + V+ A+ L  +M S G KP +VTYNTL  GL    Q   A +L
Sbjct: 340 ANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEEL 399

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
            + M ++    D  T+NT I  LC+ G +V+A+E+F+ +    C  +   Y+ +I GL K
Sbjct: 400 MDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAK 459

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           + +L+ ALELF  +  +    D + Y ++   L +D  +++A      ++++ ++P+ ++
Sbjct: 460 ATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVL 518

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +  ++ G  R  K    I+++  M     MPD
Sbjct: 519 YNAILLGLCRNGKTEFAIDIMAYMVSSGCMPD 550



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 192/393 (48%), Gaps = 34/393 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYN +++  CK     +A  L   M+ E   P+ VTYN L+ G+C   D ++A 
Sbjct: 198 CAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDAL 257

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   +   G +PS V +N ++  LC   +  +A  L+  M++ +  PN  T++ ++   
Sbjct: 258 ELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSL 317

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + +A +L   M   GC  + V+YN +ING C+ + V+ A+ L  +M S G KP +
Sbjct: 318 CRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDI 377

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  GL    Q   A +L + M ++    D  T+NT I  LC+ G +V+A+E+F+ 
Sbjct: 378 VTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQ 437

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELF--------------------------- 284
           +    C  +   Y+ +I GL K+ +L+ ALELF                           
Sbjct: 438 MPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTI 497

Query: 285 -------RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
                  R L    +    V YN ++ GLC +G+ + A D+   M  +   P+ + +V L
Sbjct: 498 EEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVIL 557

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           I G       ++  ELL K+  + V+ ++ I S
Sbjct: 558 IEGLAYEGYLNEARELLIKLCSRDVLVNSLIKS 590



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 157/328 (47%), Gaps = 6/328 (1%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           PD    N L+  LC     ++A+R+       G   +VV +  + D  C+ G++ +A R+
Sbjct: 101 PDAALANRLVRDLCRRGRPDDAERVVGAC---GPAATVVAYGALTDGYCRAGRLGDARRV 157

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
           +  M    V+PNA+TY+ L+   C  G++  A  +   M   GC  D V+YNIL+   CK
Sbjct: 158 VGGM---PVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCK 214

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
            +   +A+ L   M ++G  P  VTYN L  G+     V+ AL+L   +        T  
Sbjct: 215 GRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVN 274

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           YNT + GLC      +A EL   +    C  +   +N +I  LC+ G L+ A++L   + 
Sbjct: 275 YNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS 334

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
           +    A++VTYN +I+GLC    +D A  L   M+     P+++ + TL+ G     +  
Sbjct: 335 KHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWV 394

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVDLL 376
              EL+  M +   +PD    + ++  L
Sbjct: 395 DAEELMDNMTQNGCLPDNVTFNTLIGFL 422


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 188/362 (51%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N   YN+++D   ++   D    L  +M+   + P V TY  L+ GL  A D ++ + ++
Sbjct: 182 NACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVY 241

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM  + V   V  ++ +++  C+ G +  AS + D  V   V PN  TY  L++GFC  
Sbjct: 242 DEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKI 301

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+I  AE L   M+  G  H+ + +N +I+GYC++  VE+AL +   M   GI+  + TY
Sbjct: 302 GQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTY 361

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           NTL  GL  ++++E A KL   M    VA +  +Y T I    K G +VEA  LFR +  
Sbjct: 362 NTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEG 421

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                 +  YN +IDG  K+G +  A    + + ++ LV D+ TY  ++HG C +G++D 
Sbjct: 422 KGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDV 481

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  LF +M+     PNV+ +  L+ G  +  +  +  +L   M    + PD ++ S++V 
Sbjct: 482 ALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVG 541

Query: 375 LL 376
            L
Sbjct: 542 SL 543



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 172/330 (52%), Gaps = 8/330 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P   TY  ++DGL + G + K +A++ +MK +N+  DV  Y+++I+  C   +   A  
Sbjct: 215 EPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASE 274

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F E +  GV+P+  T+  +++  CK G+++ A  LL  M  R V  N   ++T++DG+C
Sbjct: 275 VFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYC 334

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G + +A E+   ME MG + D  +YN L  G C+   +E+A  L   M  KG+ P  V
Sbjct: 335 RHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYV 394

Query: 193 TYNTLFLGLFEIHQVE----HALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           +Y T    L  IH  E     A +LF +M+         TYN  IDG  KNG I EA   
Sbjct: 395 SYTT----LISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERF 450

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            + +       DI  Y  L+ G C +G++++AL LF  +  R    +VV Y  ++ GL  
Sbjct: 451 KKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAK 510

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           +G+ ++A  L+ DM    + P+  ++  L+
Sbjct: 511 EGRSEEAFQLYDDMLAAGLTPDDTLYSVLV 540



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 135/269 (50%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G   +PN  TY  +I+G CK G ++ A+ L   M+   +  + + +N++I G C     
Sbjct: 280 VGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMV 339

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            +A  +   M   G++  + T+N +   LC+  +M++A +LL +M ++ V PN  +Y+TL
Sbjct: 340 EKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTL 399

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +      G +  A  LF  ME  G +   V+YN++I+GY KN  + EA    +EM  KG+
Sbjct: 400 ISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGL 459

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P + TY  L  G     +V+ AL+LFEEM+      +   Y   + GL K G   EA +
Sbjct: 460 VPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQ 519

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           L+  +       D   Y+ L+  L    R
Sbjct: 520 LYDDMLAAGLTPDDTLYSVLVGSLHTDSR 548



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 139/294 (47%), Gaps = 3/294 (1%)

Query: 84  PSVVT---FNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           P+ VT    +V++D  CK+G +D+A  LLD + +  V  NA  Y++L+D +      +  
Sbjct: 143 PASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAV 202

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
             L   ME+ G +    +Y IL++G  +  ++ +  ++Y EM  K +   V  Y+ +   
Sbjct: 203 AGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINA 262

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
                 V  A ++F+E     V  +  TY   I+G CK G I  A  L   + +     +
Sbjct: 263 YCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHN 322

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
              +N +IDG C+ G +E ALE+   + +  +  D+ TYN +  GLC   +M+ A  L  
Sbjct: 323 QIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLH 382

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            M E  VAPN + + TLI    +     +   L   M+ K   P     ++++D
Sbjct: 383 IMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMID 436



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 146/318 (45%), Gaps = 37/318 (11%)

Query: 85  SVVTF-NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEEL 143
           +V  F ++++     +G    A+  LD  V R  R +  + ++ +      G++  A +L
Sbjct: 75  AVAAFHDMLLRAYADSGAAVRAAEALDATVSRLGRLDPRSLTSSLLSLRRAGQLPAAADL 134

Query: 144 FG-SMESMGCKHDDVSYNILINGYCKNKEVEEA--------------------------- 175
            G ++ S       +S +++++G+CK+  V++A                           
Sbjct: 135 LGKAIASCPASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYT 194

Query: 176 --------LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
                     L +EM ++G++PTV TY  L  GL     +     +++EM+R +VA D  
Sbjct: 195 RQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVY 254

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
            Y+  I+  C+ G +  A E+F        E + + Y  LI+G CK G++E A  L   +
Sbjct: 255 FYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADM 314

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
             R +  + + +N MI G C  G ++KA ++   ME+  +  ++  + TL  G  R+N+ 
Sbjct: 315 QLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRM 374

Query: 348 SKVIELLHKMKEKKVMPD 365
               +LLH M EK V P+
Sbjct: 375 EDAKKLLHIMAEKGVAPN 392



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY  ++ G C  G VD A  LF +MK     P+VV Y +L+ GL       EA +L
Sbjct: 461 PDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQL 520

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR 107
           + +M+  G+ P    ++V++  L  + + D   R
Sbjct: 521 YDDMLAAGLTPDDTLYSVLVGSLHTDSRKDPLPR 554


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/360 (32%), Positives = 193/360 (53%), Gaps = 3/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    YN +I+  CKEG +  AK +F +++   + P  V++N+LI+GLC + + +E  RL
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M +  + P V T++V++  LCK G++D A +L D M QR +RPN  T++ L+DG   
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYR 340

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           + +++ A   +  M +MG K D V YN L+NG CK  +V +A  L  EM   G+KP  +T
Sbjct: 341 SRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKIT 400

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G  +   +E A+++ + M  + V  D   +   I G C++G + +A    R + 
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D   Y  +IDG CK G +++  +L + +        V+TYN++++GLC  GQM 
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMK 520

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A+ L   M    V P+ I +  L+ G     K  K  +LL    EK ++ D +  + +V
Sbjct: 521 NANMLLEAMLNLGVTPDDITYNILLEGHC---KNGKAEDLLKLRNEKGLIVDYAYYTSLV 577



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 179/329 (54%), Gaps = 3/329 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P TV++NT+I+GLCK   +D+   L   M+   I PDV TY+ LIHGLC     + A++
Sbjct: 255 RPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQ 314

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  +G++P+ +TF  ++D   ++ +MD A      M+   V+P+   Y+TL++G C
Sbjct: 315 LFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLC 374

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +N+A +L   M+ +G K D ++Y  LI+GYCK  ++E A+ + + M  +G+    V
Sbjct: 375 KVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNV 434

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            +  L  G     +V  A +   EM    +  D +TY   IDG CK G +    +L + +
Sbjct: 435 AFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM 494

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            I   +  +  YN L++GLCK G+++ A  L  ++    +  D +TYNI++ G C +G  
Sbjct: 495 QINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG-- 552

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            KA DL     E  +  +   + +L+  +
Sbjct: 553 -KAEDLLKLRNEKGLIVDYAYYTSLVSEY 580



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 170/340 (50%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           ++ ++      GFV  A   F  ++  N          L+  + ++N        + E++
Sbjct: 156 FDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEIL 215

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           + G  P V  +N+++++ CK G + +A  + + + +R +RP   +++TL++G C +  ++
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
               L  +ME      D  +Y++LI+G CK   ++ A  L+ EM  +G++P  +T+  L 
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            G +   +++ A+  + +M    V  D   YNT ++GLCK G + +A +L   + ++  +
Sbjct: 336 DGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMK 395

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            D   Y  LIDG CK G LE A+E+ + +    +V D V +  +I G C DG++  A   
Sbjct: 396 PDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERT 455

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
             +M E  + P+   +  +I G+ +        +LL +M+
Sbjct: 456 LREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQ 495



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 131/256 (51%)

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           P    Y+ L++ FC  G I  A+ +F  +   G +   VS+N LING CK++ ++E   L
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
            + M    I P V TY+ L  GL +  +++ A +LF+EMQ+  +  +  T+   IDG  +
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYR 340

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           +  +  A+  +  +  +  + D+  YN L++GLCK G +  A +L   +    +  D +T
Sbjct: 341 SRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKIT 400

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y  +I G C +G ++ A ++   M E  V  + + F  LI GF R  +       L +M 
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460

Query: 359 EKKVMPDASIVSMVVD 374
           E  + PD +  +MV+D
Sbjct: 461 EAGMKPDDATYTMVID 476



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 150/324 (46%), Gaps = 11/324 (3%)

Query: 51  VVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD 110
           + T+       C   ++  A ++F E        S++ F V      + GK   AS    
Sbjct: 94  IPTFRHTSQSYCAMANFLSAHQMFQECQ------SIIRFLV-----SRKGKDSAASVFAA 142

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
           ++     R + F +  LM  +  +G ++ A + F  + +   +        L++    + 
Sbjct: 143 ILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSN 202

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
                 + Y E++  G  P V  YN L     +   +  A  +F E+++  +   T ++N
Sbjct: 203 SPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFN 262

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           T I+GLCK+  + E   L +T+   +   D+  Y+ LI GLCK GRL++A +LF  + +R
Sbjct: 263 TLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR 322

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
            L  + +T+  +I G     +MD A + +  M    V P+++++ TL++G  ++   +K 
Sbjct: 323 GLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKA 382

Query: 351 IELLHKMKEKKVMPDASIVSMVVD 374
            +L+ +MK   + PD    + ++D
Sbjct: 383 RKLVDEMKMVGMKPDKITYTTLID 406


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 198/398 (49%), Gaps = 35/398 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN V+YN +++GL  +G  D+AK L  QM    +     TYN LI G C    + EA 
Sbjct: 238 CDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEAN 297

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN----------- 120
            L  EM+ +G  P+VVT+N IM  LC+ G++ +A R LD+MV  D+ P+           
Sbjct: 298 DLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGY 357

Query: 121 ------------------------AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
                                     TY+TL+DG C TG ++ A+ +   M   G   D 
Sbjct: 358 SRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDV 417

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           V++ IL+ G+C+   +  A  L+ EM+S+G+KP  + Y T  +G  ++     A  + EE
Sbjct: 418 VTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEE 477

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M+ +    D  TYN  I+GLCK G   +A EL + + +     D   Y  +I     SG 
Sbjct: 478 MKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGL 537

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           L  A E+F  + ++ +   VVTY ++IH     G++D A   F +M++  V+PNVI +  
Sbjct: 538 LRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNA 597

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           LI+G  + N       L  +M+ K V P+    +++++
Sbjct: 598 LIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILIN 635



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 191/353 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTYNTI+  LC+ G V  A+     M  E++ PD+V+YN+LI+G     ++ EA  L
Sbjct: 310 PTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLL 369

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E+  + + PSVVT+N ++D  C+ G +D A  + D M++  + P+  T++ L+ GFC 
Sbjct: 370 FSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQ 429

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A+ELF  M S G K D ++Y   I G  K     +A  +  EM ++G  P ++T
Sbjct: 430 MGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLIT 489

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  GL ++   + A +L ++M+ + +  D  TY + I     +G + +A E+F  + 
Sbjct: 490 YNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDML 549

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  +  Y  LI      GRL+ A + F  +  + +  +V+TYN +I+GLC +  MD
Sbjct: 550 KKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMD 609

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            A++LF +ME   V+PN   +  LI+    +      ++L   M ++++ PD+
Sbjct: 610 VAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDS 662



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/362 (33%), Positives = 192/362 (53%), Gaps = 4/362 (1%)

Query: 8   IGVVCKPNTVTYNTIIDGL----CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH 63
           +G+ C  N+     ++D L     K+  ++K   +F +M    + PDV   N ++  L  
Sbjct: 125 VGIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKD 184

Query: 64  ANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
            +  NE + ++  M+   ++P++VTFN +MD  CK G++  A  +LD+M      PN  +
Sbjct: 185 KSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVS 244

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           Y+ L++G    G+ +RA+EL   M  +G K    +YN LI G+CK +  EEA  L REM+
Sbjct: 245 YNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREML 304

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
            +G  PTVVTYNT+   L  + +V  A +  + M  +D+  D  +YNT I G  + G   
Sbjct: 305 GRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFA 364

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           EA+ LF  L        +  YN LIDG C++G L+IA  +   + +  L  DVVT+ I++
Sbjct: 365 EALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILV 424

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            G C  G +  A +LF +M    + P+ I + T I G +++  PSK   +  +MK +   
Sbjct: 425 RGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFP 484

Query: 364 PD 365
           PD
Sbjct: 485 PD 486



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 181/361 (50%), Gaps = 2/361 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VT+NT++D  CKEG V +A  +   M+    +P+ V+YN L++GL    +++ AK 
Sbjct: 204 RPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKE 263

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M   G++ S  T+N ++   CK    +EA+ L   M+ R   P   TY+T+M   C
Sbjct: 264 LIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLC 323

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ A      M +     D VSYN LI GY +     EAL L+ E+ SK + P+VV
Sbjct: 324 RLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVV 383

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G      ++ A  + ++M +  +  D  T+   + G C+ G +  A ELF  +
Sbjct: 384 TYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEM 443

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D  AY   I G  K G    A  +   +       D++TYN++I+GLC  G  
Sbjct: 444 LSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNF 503

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A++L   M    + P+ + + ++IH  +      K  E+   M +K + P  S+V+  
Sbjct: 504 DDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHP--SVVTYT 561

Query: 373 V 373
           V
Sbjct: 562 V 562



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 149/299 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+IDG C+ G +D AK +   M    + PDVVT+  L+ G C   +   AK L
Sbjct: 380 PSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKEL 439

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+ +G++P  + +   +    K G   +A  + + M      P+  TY+ L++G C 
Sbjct: 440 FDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCK 499

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A EL   M   G   D V+Y  +I+ +  +  + +A  ++ +M+ KGI P+VVT
Sbjct: 500 LGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVT 559

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L        +++ A K F+EMQ   V+ +  TYN  I GLCK   +  A  LF  + 
Sbjct: 560 YTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEME 619

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 +   Y  LI+        + AL+L++ +  R +  D  T++ ++  L  D ++
Sbjct: 620 SKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKL 678



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 132/246 (53%), Gaps = 9/246 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ + Y T I G  K G   KA  +  +MK E   PD++TYN LI+GLC   ++++A  
Sbjct: 449 KPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANE 508

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M  +G+ P  VT+  I+     +G + +A  +   M+++ + P+  TY+ L+  + 
Sbjct: 509 LVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYA 568

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + G+++ A++ F  M+  G   + ++YN LI G CK   ++ A +L+ EM SKG+ P   
Sbjct: 569 VRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKY 628

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L      +   + ALKL+++M   ++  D+ T++  +  L K+         ++ L
Sbjct: 629 TYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKD---------YKLL 679

Query: 253 GILKCE 258
            +L+ E
Sbjct: 680 AVLRLE 685



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 146/383 (38%), Gaps = 93/383 (24%)

Query: 74  FFEMMDQGVQP----SVVTFNVIMDELCKNGKMDEAS----------------------- 106
           FF  +++  QP    S   F  I+D L KNG M  A                        
Sbjct: 71  FFRWVEK--QPNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVLVGIG 128

Query: 107 ---------RLLDLMVQ--------------------RDVRPNAFTYSTLMDGFCLTGKI 137
                    +LLDL++Q                      + P+    + ++        +
Sbjct: 129 CGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMV 188

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           N  EE++  M     +   V++N +++  CK  EV  A+ +   M   G  P  V+YN L
Sbjct: 189 NEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVL 248

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GI 254
             GL    + + A +L E+M    +     TYN  I G CK     EA +L R +   G 
Sbjct: 249 VNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGA 308

Query: 255 LK------------CEL--------------------DIQAYNCLIDGLCKSGRLEIALE 282
           L             C L                    D+ +YN LI G  + G    AL 
Sbjct: 309 LPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALL 368

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           LF  L  + LV  VVTYN +I G C  G +D A  +  DM ++ + P+V+ F  L+ GF 
Sbjct: 369 LFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFC 428

Query: 343 RINKPSKVIELLHKMKEKKVMPD 365
           ++       EL  +M  + + PD
Sbjct: 429 QMGNLPMAKELFDEMLSRGLKPD 451


>gi|414888175|tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea mays]
          Length = 667

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/356 (33%), Positives = 187/356 (52%), Gaps = 1/356 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+    N  +D LCK   +  A      M     NPDVVTY +++  LC    + EA 
Sbjct: 262 CFPDIWACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAV 321

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L+ EM+ +G++P +V   V++  LCK+ K+DEA  L   M+  ++  N   Y+ L+ GF
Sbjct: 322 ELWEEMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGF 381

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI-KPT 190
             +G IN+A ++   M + GC+ D V+YNI +N YC    ++EA  L  EM   GI  P 
Sbjct: 382 LRSGSINKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPD 441

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             +YN +  GL + HQ++ A     +        D  + N  ID  CK   +  A++LF+
Sbjct: 442 RYSYNQMLKGLCKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFK 501

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +G    + D   Y  LI+GL   G   +A E+F  + +  +V +V  YNIM+H LC  G
Sbjct: 502 EMGYKGIQADAVTYGTLINGLYGVGYYYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAG 561

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           Q ++A  +FL M +  V+P++I F TLI+   + ++  + I+L   M  + + PD+
Sbjct: 562 QFEQAQKIFLQMIQKEVSPDIITFNTLIYWLGKCSRAIEAIDLFRDMTARGIEPDS 617



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/335 (33%), Positives = 180/335 (53%), Gaps = 1/335 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V    +I GLCK   VD+A  L L+M   N+  +V  YN+LI G   +   N+A +
Sbjct: 333 KPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAFK 392

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM-VQRDVRPNAFTYSTLMDGF 131
           +   M   G +P VVT+N+ ++  C  G + EA +L++ M +   V P+ ++Y+ ++ G 
Sbjct: 393 IISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGL 452

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +++RA         +G   D VS NILI+ +CK K+V  AL L++EM  KGI+   
Sbjct: 453 CKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADA 512

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY TL  GL+ +     A ++FE+M +  V  + + YN  +  LCK G   +A ++F  
Sbjct: 513 VTYGTLINGLYGVGYYYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQ 572

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +   DI  +N LI  L K  R   A++LFR +  R +  D +T+  +I GL  +G+
Sbjct: 573 MIQKEVSPDIITFNTLIYWLGKCSRAIEAIDLFRDMTARGIEPDSLTFRYLISGLLEEGK 632

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
             +A++++  M EN +  +  +   LI  F   NK
Sbjct: 633 ATQAYEVWEYMLENGIILDRDVSDRLISMFKSNNK 667



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 185/364 (50%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY T++  LC      +A  L+ +M    + PD+V    LI GLC ++  +EA  L
Sbjct: 299 PDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACGVLIFGLCKSDKVDEAFEL 358

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+   ++ +V  +N ++    ++G +++A +++ +M      P+  TY+  ++ +C 
Sbjct: 359 ALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRTNGCEPDVVTYNIRLNHYCN 418

Query: 134 TGKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           TG I  AE+L   ME  G    D  SYN ++ G CK  +++ A     + +  G    +V
Sbjct: 419 TGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAFGFVSDHMEVGGFCDIV 478

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           + N L     +  +V  ALKLF+EM    + AD  TY T I+GL   GY   A E+F  +
Sbjct: 479 SCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTLINGLYGVGYYYLAEEIFEQM 538

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   ++  YN ++  LCK+G+ E A ++F  + ++ +  D++T+N +I+ L    + 
Sbjct: 539 LKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLIYWLGKCSRA 598

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A DLF DM    + P+ + F  LI G +   K ++  E+   M E  ++ D  +   +
Sbjct: 599 IEAIDLFRDMTARGIEPDSLTFRYLISGLLEEGKATQAYEVWEYMLENGIILDRDVSDRL 658

Query: 373 VDLL 376
           + + 
Sbjct: 659 ISMF 662



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 138/294 (46%), Gaps = 1/294 (0%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           Y  L+ G   A  ++     F EM+  G +   V +N  +  L KN   D   +   + +
Sbjct: 164 YRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVLVKNCCFDLVEKYYSVAL 223

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
            +     +FTYS  +   C + +I   E L   M+  GC  D  + NI ++  CK+  + 
Sbjct: 224 DKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPDIWACNIYVDCLCKHNRLH 283

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           +AL     M  +G  P VVTY T+   L +  Q   A++L+EEM R  +  D       I
Sbjct: 284 DALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACGVLI 343

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
            GLCK+  + EA EL   +  L  EL++  YN LI G  +SG +  A ++   +      
Sbjct: 344 FGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRTNGCE 403

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVA-PNVIIFVTLIHGFVRINK 346
            DVVTYNI ++  CN G + +A  L  +ME + +  P+   +  ++ G  + ++
Sbjct: 404 PDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQ 457



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 161/349 (46%), Gaps = 1/349 (0%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           Y  ++ G  + G  D     F +M         V YN  I  L     ++  ++ +   +
Sbjct: 164 YRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVLVKNCCFDLVEKYYSVAL 223

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           D+G   +  T++  +  LC++ +++   RLL  M +    P+ +  +  +D  C   +++
Sbjct: 224 DKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPDIWACNIYVDCLCKHNRLH 283

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A +   +M   G   D V+Y  ++   C NK+  EA+ L+ EMV +G+KP +V    L 
Sbjct: 284 DALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACGVLI 343

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            GL +  +V+ A +L   M   ++  +   YN  I G  ++G I +A ++   +    CE
Sbjct: 344 FGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRTNGCE 403

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV-ADVVTYNIMIHGLCNDGQMDKAHD 317
            D+  YN  ++  C +G ++ A +L   +    +V  D  +YN M+ GLC   Q+D+A  
Sbjct: 404 PDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAFG 463

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              D  E     +++    LI  F +  K S  ++L  +M  K +  DA
Sbjct: 464 FVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADA 512



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 118/260 (45%)

Query: 106 SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILING 165
           S  L+ +  + V  +   Y  L+ G+   GK +     F  M + GC+   V YN  I  
Sbjct: 146 SEFLERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGV 205

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
             KN   +     Y   + KG   T  TY+     L +  ++E   +L  +M +     D
Sbjct: 206 LVKNCCFDLVEKYYSVALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPD 265

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
               N ++D LCK+  + +A++    + I     D+  Y  ++  LC + +   A+EL+ 
Sbjct: 266 IWACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWE 325

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            + RR L  D+V   ++I GLC   ++D+A +L L M    +  NV I+  LI GF+R  
Sbjct: 326 EMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSG 385

Query: 346 KPSKVIELLHKMKEKKVMPD 365
             +K  +++  M+     PD
Sbjct: 386 SINKAFKIISVMRTNGCEPD 405



 Score =  103 bits (258), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 110/228 (48%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+  +  P+  +YN ++ GLCK   +D+A              D+V+ N LI   C A  
Sbjct: 433 EMSGIVNPDRYSYNQMLKGLCKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKK 492

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            + A +LF EM  +G+Q   VT+  +++ L   G    A  + + M++  V PN   Y+ 
Sbjct: 493 VSSALKLFKEMGYKGIQADAVTYGTLINGLYGVGYYYLAEEIFEQMLKARVVPNVNLYNI 552

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++   C  G+  +A+++F  M       D +++N LI    K     EA+ L+R+M ++G
Sbjct: 553 MLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLIYWLGKCSRAIEAIDLFRDMTARG 612

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           I+P  +T+  L  GL E  +   A +++E M  + +  D    +  I 
Sbjct: 613 IEPDSLTFRYLISGLLEEGKATQAYEVWEYMLENGIILDRDVSDRLIS 660


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 185/340 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN       I  LCK G  ++A  ++  + G+ +  ++ T N+LIHGLC  N+  EA +
Sbjct: 424 KPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATK 483

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M+D GV+   +T+N+++   CK  KM+EA +L D M++R  +P+ FT++T +  +C
Sbjct: 484 VLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYC 543

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+     L   M+S G K D V+Y  +I+GYCK K+V +A     E++  G++P  V
Sbjct: 544 NLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAV 603

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN L  G      +  A+ + + M+ + +     TYN+ +  +C  G + EA E+F   
Sbjct: 604 IYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQC 663

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +   EL +  Y  +I G CK G+++ A+  F+ +  R +  + +TY  +++  C  G  
Sbjct: 664 ILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNK 723

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
           ++A  LF +M  + + P+ + + TLI G   ++   K++E
Sbjct: 724 EEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVE 763



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 201/404 (49%), Gaps = 47/404 (11%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMK-GENINPDVVTYNSLIHGLCHANDWNEAK 71
            P+  T N +++ L   G +D A+ +F +M+ G  + PDV TY  +I  LC A + + A 
Sbjct: 177 SPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAF 236

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  E+   G+QP+VVT+NV+MD LC++G+++EA +L   MV+  +RP+  T+  L++G 
Sbjct: 237 VMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGL 296

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +    + +   ME  G   ++V YN LI  +C+     EAL L+ EMVSKGIK TV
Sbjct: 297 ARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTV 356

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF------------------- 232
           VTYN +   L +  ++EHA ++ +EM    +    S +N+                    
Sbjct: 357 VTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIR 416

Query: 233 -----------------IDGLCKNGYIVEAVELF-----RTLGILKCELDIQAYNCLIDG 270
                            I  LCK G   EA E++     + LG+     +I   N LI G
Sbjct: 417 EMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGV-----NIATSNALIHG 471

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LC+   ++ A ++ +++    +  D +TYNIMI   C   +M++A  L  DM +    P+
Sbjct: 472 LCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPD 531

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +  F T +  +  + K   ++ LL +MK + + PD      ++D
Sbjct: 532 LFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIID 575



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 175/389 (44%), Gaps = 36/389 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKA----------------------------------- 37
           K   VTYN I   LCKEG ++ A+                                    
Sbjct: 353 KQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVL 412

Query: 38  -LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
            L  +M    + P+     + I  LC      EA  ++F ++ +G+  ++ T N ++  L
Sbjct: 413 RLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGL 472

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           C+   M EA+++L  MV   V  +  TY+ ++   C   K+  A +L   M   G K D 
Sbjct: 473 CQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDL 532

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            ++N  +  YC   +VE+ L L  +M S+G+KP +VTY T+  G  +   V  A K   E
Sbjct: 533 FTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIE 592

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           + ++ +  +   YN  I G  +NG I +A+ +  T+     +     YN L+  +C +G 
Sbjct: 593 LIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGL 652

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +E A E+F     + +   V+ Y I+I G C  G++D+A   F +M    + PN + + T
Sbjct: 653 VEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTT 712

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           L++ + +     +  +L  +M    ++PD
Sbjct: 713 LMYAYCKCGNKEEAFKLFDEMVSSGIVPD 741



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 170/363 (46%), Gaps = 36/363 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT+  +I+GL +     +  A+  +M+G  I P+ V YN LI   C     +EA R
Sbjct: 283 RPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALR 342

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM-------------------- 112
           LF EM+ +G++ +VVT+N+I   LCK G+M+ A ++LD M                    
Sbjct: 343 LFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHL 402

Query: 113 ----------------VQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
                           V R ++PN    +  +   C  GK   A E++  +   G   + 
Sbjct: 403 RGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNI 462

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            + N LI+G C+   ++EA  + + MV  G++   +TYN +     +  ++E A++L ++
Sbjct: 463 ATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDD 522

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M +     D  T+NTF+   C  G + + + L   +     + DI  Y  +IDG CK+  
Sbjct: 523 MIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKD 582

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +  A +    L +  L  + V YN +I G   +G +  A  +   M+ N + P  I + +
Sbjct: 583 VHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNS 642

Query: 337 LIH 339
           L++
Sbjct: 643 LMY 645



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 108/206 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY TIIDG CK   V KA    +++    + P+ V YN+LI G       ++A  
Sbjct: 564 KPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIG 623

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M   G+QP+ +T+N +M  +C  G ++EA  +    + +++      Y+ ++ GFC
Sbjct: 624 VLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFC 683

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GKI+ A   F  M     + + ++Y  L+  YCK    EEA  L+ EMVS GI P  V
Sbjct: 684 KIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTV 743

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +YNTL  G  E+  ++  ++   EM 
Sbjct: 744 SYNTLISGCCEVDSLDKIVESPAEMS 769



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 95/172 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V YN +I G  + G +  A  +   MK   I P  +TYNSL++ +CHA    EAK 
Sbjct: 599 RPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKE 658

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F + + + ++  V+ + +I+   CK GK+DEA      M  RD+RPN  TY+TLM  +C
Sbjct: 659 IFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYC 718

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
             G    A +LF  M S G   D VSYN LI+G C+   +++ +    EM S
Sbjct: 719 KCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMSS 770



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 145/332 (43%), Gaps = 41/332 (12%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD---VRPNAFTYST 126
           A   F E+  +G  PS+ T N++++ L   G++D A ++   M  RD   V P+ +TY+ 
Sbjct: 164 AADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEM--RDGNAVAPDVYTYTV 221

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++   C  G+I+ A  +   +E  G +   V+YN+L++  C++  VEEA  L   MV   
Sbjct: 222 MIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGR 281

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           ++P++VT+  L  GL    +      + +EM+   +  +   YN  I   C+ G+  EA+
Sbjct: 282 LRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEAL 341

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCK--------------------------------- 273
            LF  +     +  +  YN +   LCK                                 
Sbjct: 342 RLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWH 401

Query: 274 ---SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
              +GRL++ L L R +  R L  +       I  LC  G+ ++A +++  +    +  N
Sbjct: 402 LRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVN 461

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           +     LIHG  + N   +  ++L  M +  V
Sbjct: 462 IATSNALIHGLCQGNNMKEATKVLKAMVDSGV 493



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 5/201 (2%)

Query: 167 CKNKEVEEALS----LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD- 221
           C N     +LS     + E+ ++G  P++ T N L   L    Q++ A K+F EM+  + 
Sbjct: 152 CLNSPAPGSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNA 211

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           VA D  TY   I  LC+ G I  A  +   L     +  +  YN L+D LC+SGR+E A 
Sbjct: 212 VAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAF 271

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           +L   +    L   +VT+ I+I+GL    +  +   +  +ME   + PN +I+  LI   
Sbjct: 272 QLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWH 331

Query: 342 VRINKPSKVIELLHKMKEKKV 362
            R    S+ + L  +M  K +
Sbjct: 332 CREGHCSEALRLFDEMVSKGI 352



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE-NAVAPNVII 333
           G L  A + F  L  R     + T NI++  L   GQ+D A  +F +M + NAVAP+V  
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +  +I    R  +      +L +++   + P     ++++D L
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDAL 261


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 202/398 (50%), Gaps = 36/398 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+   YN +I G CK   ++ AK +  +MK +  +PDVVT+N +I   C     + A +
Sbjct: 41  KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALK 100

Query: 73  LFFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +F E++ D   +P+++T+ ++++     G +DEA +LLD M+ R + P+ FTY+ +  G 
Sbjct: 101 VFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGL 160

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNIL----------------------------- 162
           C  GK++RA E   ++ S GCK D ++YNIL                             
Sbjct: 161 CKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNV 220

Query: 163 ------INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
                 I+  C++ ++EE+++L + M  KG+ P    Y+ L        +++ A++  + 
Sbjct: 221 VTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDC 280

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M  D    D   YNT +  LCKNG    AVE+F  L  + C  ++ +YN ++  L  SG 
Sbjct: 281 MICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGD 340

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
              AL +   +  + +  DV+TYN +I  LC DG +D+A  L  DM      PN++ + T
Sbjct: 341 RYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKT 400

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           ++ G  + ++    IE+L  M E    P+ +  +++++
Sbjct: 401 VLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIE 438



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 169/306 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+T TYN I  GLCKEG VD+A      +      PDV+TYN L+  L +   W+E ++
Sbjct: 147 EPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEK 206

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              E+  +G +P+VVT+++++  LC++GK++E+  L+ +M ++ + P+A+ Y  L+  FC
Sbjct: 207 WMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFC 266

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK++ A E    M   G   D V+YN ++   CKN   + A+ ++ ++   G  P V 
Sbjct: 267 REGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVS 326

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNT+   L+       AL +  +M    +  D  TYN+ I  LC++G + EA+ L   +
Sbjct: 327 SYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADM 386

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + + +I +Y  ++ GLCK+ R++ A+E+  ++       +  TY ++I G+   G  
Sbjct: 387 LSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSR 446

Query: 313 DKAHDL 318
            +A +L
Sbjct: 447 TQAMEL 452



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 176/356 (49%), Gaps = 6/356 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKAL--FLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +P+ +    +I G      +DKA  +   L+  G+   PDV  YN++I G C AN    A
Sbjct: 7   QPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGK---PDVFAYNAVISGFCKANRIESA 63

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD-LMVQRDVRPNAFTYSTLMD 129
           K +   M  +G  P VVT N+++   C  GK+D A ++ + L+   + +P   TY+ L++
Sbjct: 64  KTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIE 123

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            + L G I+ A +L   M S G + D  +YN++  G CK  +V+ A    R + S+G KP
Sbjct: 124 AYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKP 183

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V+TYN L   L    + +   K   E+       +  TY+  I  LC++G I E+V L 
Sbjct: 184 DVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLV 243

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + +       D   Y+ LI   C+ G+L++A+E    +     + D+V YN ++  LC +
Sbjct: 244 KVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKN 303

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           G  D A ++F  ++E    PNV  + T++          + + ++ +M  K + PD
Sbjct: 304 GNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPD 359



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 168/352 (47%), Gaps = 12/352 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP  +TY  +I+    EG +D+A  L  +M    + PD  TYN +  GLC     + A 
Sbjct: 111 CKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAF 170

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                +  +G +P V+T+N+++  L   GK DE  + +  +  R   PN  TYS L+   
Sbjct: 171 EFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSL 230

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GKI  +  L   M+  G   D   Y+ LI  +C+  +++ A+     M+  G  P +
Sbjct: 231 CRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDI 290

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YNT+   L +    +HA+++F ++       + S+YNT +  L  +G      + +R 
Sbjct: 291 VNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSG------DRYRA 344

Query: 252 LGILKCEL------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           LG++   L      D+  YN LI  LC+ G ++ A+ L   +       ++V+Y  ++ G
Sbjct: 345 LGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLG 404

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           LC   ++D A ++   M EN   PN   +  LI G       ++ +EL + +
Sbjct: 405 LCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSL 456



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 131/244 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN VTY+ +I  LC++G ++++  L   MK + + PD   Y+ LI   C     + A 
Sbjct: 216 CEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAI 275

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                M+  G  P +V +N IM  LCKNG  D A  +   + +    PN  +Y+T++   
Sbjct: 276 EFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSAL 335

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
             +G   RA  +   M S G   D ++YN LI+  C++  V+EA+ L  +M+S   +P +
Sbjct: 336 WSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNI 395

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+Y T+ LGL + H+++ A+++   M  +    + +TY   I+G+  +G   +A+EL  +
Sbjct: 396 VSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANS 455

Query: 252 LGIL 255
           L I+
Sbjct: 456 LYIM 459



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 9/163 (5%)

Query: 3   NGNGEIGVV---------CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVT 53
           NGNG+  V          C PN  +YNT++  L   G   +A  +  QM  + I+PDV+T
Sbjct: 303 NGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVIT 362

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           YNSLI  LC     +EA  L  +M+    QP++V++  ++  LCK  ++D+A  +L  M+
Sbjct: 363 YNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMI 422

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           +   +PN  TY+ L++G   +G   +A EL  S+  M    +D
Sbjct: 423 ENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMNAISED 465


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/390 (31%), Positives = 195/390 (50%), Gaps = 38/390 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +++N +I  LCK GFVD+A  +F  M  +   PD  TY +L+ GLC     +EA  L
Sbjct: 185 PNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLL 244

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G  PS V +NV++D LCK G +   ++L+D M  +   PN  TY+TL+ G CL
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCL 304

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK----------------------- 170
            GK+++A  L   M S  C  +DV+Y  LING  K +                       
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHI 364

Query: 171 ------------EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
                       + EEA++L+++M  KG +P +V Y+ +  GL    +   A ++   M 
Sbjct: 365 YSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMI 424

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                 +  TY++ + G  K G   EA++++R +    C  +   Y+ LIDGLC  GR++
Sbjct: 425 SSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVK 484

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM---EENAVAPNVIIFV 335
            A+ ++  +    +  D V Y+ MI GLC  G MD A  L+ +M   EE    P+V+ + 
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            L+ G       S+ ++LL+ M ++   PD
Sbjct: 545 ILLDGLCMQKDVSRAVDLLNCMLDRGCDPD 574



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 181/365 (49%), Gaps = 17/365 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYNT+I GLC +G +DKA +L  +M      P+ VTY +LI+GL       +  
Sbjct: 288 CFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGA 347

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL   M ++G + +   ++V++  L K GK +EA  L   M ++  RPN   YS ++DG 
Sbjct: 348 RLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGL 407

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK N A+E+   M S GC  +  +Y+ L+ G+ K    EEA+ ++REM   G     
Sbjct: 408 CREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNE 467

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y+ L  GL  + +V+ A+ ++ +M    +  DT  Y++ I GLC  G +  A++L+  
Sbjct: 468 FCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHE 527

Query: 252 LGIL---KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           +      K + D+  YN L+DGLC    +  A++L   +  R    DV+T N  ++ L  
Sbjct: 528 MLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSE 587

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
                +    FL+               L+   ++  + S   +++  M  K + P  S 
Sbjct: 588 KSDSCEEGRSFLE--------------ELVARLLKRQRVSGACKIVEVMLGKYLAPKTST 633

Query: 369 VSMVV 373
            +M+V
Sbjct: 634 WAMIV 638



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 171/363 (47%), Gaps = 15/363 (4%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLI-----HGLCHANDWNEAKR 72
           T +++I+     G     + L  +++ EN    V+   S I     +G  H  +  +A  
Sbjct: 79  TLSSMIENYANLGDFASVEKLLSRIRLEN---RVIIERSFIVVFRAYGKAHLPE--KAVD 133

Query: 73  LFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD----VRPNAFTYSTL 127
           LF  M+D+   + SV +FN +++ +   G         D +V  +    + PN  +++ +
Sbjct: 134 LFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLV 193

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +   C  G ++RA E+F  M    C  D  +Y  L++G CK + ++EA+ L  EM S+G 
Sbjct: 194 IKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGC 253

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P+ V YN L  GL +   +    KL + M       +  TYNT I GLC  G + +AV 
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVS 313

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +   KC  +   Y  LI+GL K  R      L  S+  R    +   Y+++I GL 
Sbjct: 314 LLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLF 373

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            +G+ ++A  L+  M E    PN++++  +I G  R  KP++  E+L+ M     +P+  
Sbjct: 374 KEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVY 433

Query: 368 IVS 370
             S
Sbjct: 434 TYS 436



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 129/259 (49%), Gaps = 24/259 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN V Y+ +IDGLC+EG  ++AK +   M      P+V TY+SL+ G        EA 
Sbjct: 393 CRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAI 452

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +++ EM + G   +   ++V++D LC  G++ EA  +   M+   ++P+   YS+++ G 
Sbjct: 453 QVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGL 512

Query: 132 CLTGKINRAEELFGSM---ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           C  G ++ A +L+  M   E    + D V+YNIL++G C  K+V  A+ L   M+ +G  
Sbjct: 513 CGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCD 572

Query: 189 PTVVTYNT---------------------LFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           P V+T NT                     L   L +  +V  A K+ E M    +A  TS
Sbjct: 573 PDVITCNTFLNTLSEKSDSCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTS 632

Query: 228 TYNTFIDGLCKNGYIVEAV 246
           T+   +  +CK   I  A+
Sbjct: 633 TWAMIVPEICKPKKINAAI 651


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 201/361 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V++NTI+   CK GFVD AK+ F  M    + PD  +YN LIHGLC A    EA  
Sbjct: 278 QPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALD 337

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M + G++P +VT+N++       G ++ A  ++  M+ +   PN  TY+ L+ G C
Sbjct: 338 LKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHC 397

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A +L+  M S G +   +S  +L+   CK+++V+ A  L+ EM + G++P ++
Sbjct: 398 QIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLI 457

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+TL  GL +  +V+ A+ L+E+M  + +  ++  +   + GLC+ G I +A   F  L
Sbjct: 458 TYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYL 517

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 LDI  YN +IDG  K G    A++L++ L  + +   +VT+N +++G C + ++
Sbjct: 518 ITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKL 577

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  L   ++ + + PN + + TL++ +        ++ELL +MK K + P     ++V
Sbjct: 578 SQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVV 637

Query: 373 V 373
           +
Sbjct: 638 I 638



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 181/344 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN++ +  I+ GLC++G + +A+  F  +   N++ D++ YN +I G     +  EA +L
Sbjct: 489 PNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKL 548

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + ++ ++G+ P++VTFN +M   C N K+ +A RLLD +    + PNA TY+TLM+ +C 
Sbjct: 549 YKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCE 608

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +    EL   M++       ++Y ++I G CK  +++E+  L  +M + G+ P  V+
Sbjct: 609 EGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVS 668

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+     +   +  A +L+++M   ++   + TYN  I+G C  G + +A  L  +L 
Sbjct: 669 YNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQ 728

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K  L+  AY  +I   C  G ++ A+  FR +  +     +  Y+ +I  LC    + 
Sbjct: 729 NRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVT 788

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           +A   F  M  + V P+  +F  L++ F +    +   ELL +M
Sbjct: 789 EAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEM 832



 Score =  176 bits (446), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 181/352 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +YN +I GLC  G + +A  L   M+   + PD+VTYN L  G       N A  +
Sbjct: 314 PDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNI 373

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+ +G  P++VT+ V++   C+ G ++EA +L   M+    + +  + + L+   C 
Sbjct: 374 IQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCK 433

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           + +++ A +LF  ME+ G + D ++Y+ LI+G CK  EV++A+ LY +M S  I P  + 
Sbjct: 434 SRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLI 493

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  + +GL E  ++  A   F+ +   +++ D   YN  IDG  K G   EAV+L++ LG
Sbjct: 494 HGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLG 553

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  I  +N L+ G C + +L  A  L  ++    L  + VTY  +++  C +G M 
Sbjct: 554 EKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQ 613

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
              +L  +M+  A+ P  I +  +I G  +  K  +  +LL  M    + PD
Sbjct: 614 SLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPD 665



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 175/349 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  +I G C+ G V++A  L+ +M        +++   L+  LC +   + A +L
Sbjct: 384 PNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKL 443

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM   G++P ++T++ ++  LCK G++ +A  L + M    + PN+  +  ++ G C 
Sbjct: 444 FCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCE 503

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GKI++A   F  + +     D + YNI+I+GY K     EA+ LY+++  KGI PT+VT
Sbjct: 504 KGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVT 563

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N+L  G     ++  A +L + ++   +  +  TY T ++  C+ G +   +EL   + 
Sbjct: 564 FNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMK 623

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                     Y  +I GLCK  +L+ + +L   +    L  D V+YN +I   C    M 
Sbjct: 624 AKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMR 683

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           KA  L+  M  + + P  + +  LI+GF           LL  ++ +KV
Sbjct: 684 KAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKV 732



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 193/419 (46%), Gaps = 67/419 (15%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIH--------------- 59
           + V ++ +     +   V  A  + ++MK  N    + TYNSL++               
Sbjct: 178 SNVVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEI 237

Query: 60  -----------------GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKM 102
                            GLC  + + +A   F +   +  QPSVV+FN IM   CK G +
Sbjct: 238 KVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFV 297

Query: 103 DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI- 161
           D A     +M++  + P+A++Y+ L+ G C+ G +  A +L   ME+ G + D V+YNI 
Sbjct: 298 DVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNIL 357

Query: 162 ----------------------------------LINGYCKNKEVEEALSLYREMVSKGI 187
                                             LI G+C+   VEEAL LY+EM+S G 
Sbjct: 358 AKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGF 417

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           + ++++   L   L +  QV+ A KLF EM+ + +  D  TY+T I GLCK G + +A+ 
Sbjct: 418 QLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAIL 477

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L+  +   +   +   +  ++ GLC+ G++  A   F  L    L  D++ YNIMI G  
Sbjct: 478 LYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYI 537

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             G   +A  L+  + E  ++P ++ F +L++GF    K S+   LL  +K   + P+A
Sbjct: 538 KRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNA 596



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 168/346 (48%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + ++   ++  LCK   VD A  LF +M+   + PD++TY++LIHGLC   +  +A  L+
Sbjct: 420 SIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLY 479

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M    + P+ +    I+  LC+ GK+ +A    D ++  ++  +   Y+ ++DG+   
Sbjct: 480 EKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKR 539

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G    A +L+  +   G     V++N L+ G+C N+++ +A  L   +   G++P  VTY
Sbjct: 540 GNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTY 599

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            TL     E   ++  L+L  EM+   +     TY   I GLCK   + E+ +L   +  
Sbjct: 600 TTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDA 659

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           +    D  +YN +I   CK+  +  A +L+  +    L    VTYNI+I+G C  G +  
Sbjct: 660 VGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKD 719

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           A +L + ++   V  N   + T+I          K +    +M EK
Sbjct: 720 ADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEK 765



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 122/237 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY T+++  C+EG +     L  +MK + I P  +TY  +I GLC      E+ +
Sbjct: 593 EPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQ 652

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M   G+ P  V++N I+   CK   M +A +L D M+  ++ P + TY+ L++GFC
Sbjct: 653 LLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFC 712

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + G +  A+ L  S+++     +  +Y  +I  +C   +V++A+  +R+MV KG + ++ 
Sbjct: 713 VYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIR 772

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            Y+ +   L +   V  A   F  M  D V  D   +   ++   + G++    EL 
Sbjct: 773 DYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELL 829



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 79/173 (45%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+YNTII   CK   + KA  L+ +M   N+ P  VTYN LI+G C   D  +A  L
Sbjct: 664 PDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNL 723

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              + ++ V  +   +  I+   C  G +D+A      MV++    +   YS ++   C 
Sbjct: 724 LVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCK 783

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
              +  A+  F  M S G   D   + +L+N + +   +     L  EM+  G
Sbjct: 784 RCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 69/139 (49%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P +VTYN +I+G C  G +  A  L + ++   +N +   Y ++I   C   D ++A  
Sbjct: 698 EPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVV 757

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F +M+++G + S+  ++ ++  LCK   + EA     +M+   V P+   +  L++ F 
Sbjct: 758 YFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFH 817

Query: 133 LTGKINRAEELFGSMESMG 151
             G +N   EL   M   G
Sbjct: 818 QCGHLNSEFELLAEMIKSG 836


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 186/352 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+   Y TIIDG+CK+G  + A  +  +M    + P+VV YN+++ GLC A  W EA+
Sbjct: 279 CTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAE 338

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM  +      VTFN+++D  C+NG +D    LL+ M++    P+  TY+T+++GF
Sbjct: 339 DLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGF 398

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G ++ A  L  +M + GCK + +SY I++ G C+ +   +A  L   M+ +G  P  
Sbjct: 399 CKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNP 458

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NTL   + +   VE A++L ++M  +  + D  +Y+T IDGL K G   EA+EL   
Sbjct: 459 VTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 518

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       +   Y+ +   L + GR +  +++F S+    + +D   YN +I  LC   +
Sbjct: 519 MINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWE 578

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            D+A D F  M  N   PN   +  LI G        +  +LL ++  ++ +
Sbjct: 579 TDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAV 630



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 189/365 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  ++   N ++  +C++G VD+   L  ++      PD+V+YN+++ GLC A  W++ +
Sbjct: 174 CTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVE 233

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+  G  P+V TFN ++  LC+NG  ++    L  M +    P+   Y+T++DG 
Sbjct: 234 ELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGI 293

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G    A ++   M S G K + V YN ++ G C  +  EEA  L  EM  +      
Sbjct: 294 CKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDD 353

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+N L     +   V+  ++L E+M       D  TY T I+G CK G + EAV L + 
Sbjct: 354 VTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKN 413

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ +  +Y  ++ GLC++ R   A EL   + ++  + + VT+N +I+ +C  G 
Sbjct: 414 MSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGL 473

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A +L   M  N  +P++I + T+I G  +  K  + +ELL+ M  K + P+  I S 
Sbjct: 474 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSS 533

Query: 372 VVDLL 376
           +   L
Sbjct: 534 MASAL 538



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 186/366 (50%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V C PN  T+NT+I  LC+ G  ++      QM      PD+  Y ++I G+C     
Sbjct: 240 VRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHH 299

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A  +   M   G++P+VV +N ++  LC   + +EA  LL  M Q D   +  T++ L
Sbjct: 300 EVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNIL 359

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D FC  G ++R  EL   M   GC  D ++Y  +ING+CK   V+EA+ L + M + G 
Sbjct: 360 VDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGC 419

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP  ++Y  +  GL    +   A +L   M +     +  T+NT I+ +CK G + +A+E
Sbjct: 420 KPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIE 479

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L + + +  C  D+ +Y+ +IDGL K+G+ E ALEL   +  + +  + + Y+ M   L 
Sbjct: 480 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALS 539

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            +G+ DK   +F  +++  V  +  ++  +I    +  +  + I+    M     MP+ S
Sbjct: 540 REGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 599

Query: 368 IVSMVV 373
             ++++
Sbjct: 600 TYTILI 605



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 188/365 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ V+YN ++ GLC     D  + L ++M      P+V T+N+LI  LC    + +  
Sbjct: 209 CEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVH 268

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
               +M + G  P +  +  I+D +CK+G  + A+ +L  M    ++PN   Y+T++ G 
Sbjct: 269 EALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGL 328

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +   AE+L   M    C  DDV++NIL++ +C+N  V+  + L  +M+  G  P V
Sbjct: 329 CSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDV 388

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY T+  G  +   V+ A+ L + M       +T +Y   + GLC+    V+A EL   
Sbjct: 389 ITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISH 448

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  +   +N LI+ +CK G +E A+EL + +       D+++Y+ +I GL   G+
Sbjct: 449 MIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 508

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            ++A +L   M    + PN II+ ++     R  +  K+I++   +++  V  DA++ + 
Sbjct: 509 TEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNA 568

Query: 372 VVDLL 376
           V+  L
Sbjct: 569 VISSL 573



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 170/367 (46%), Gaps = 4/367 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEG-FVDKAKAL-FLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           C       + I++  C+ G F    +AL  L  KG  +  D    N ++  +C     +E
Sbjct: 139 CAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTL--DSGNCNLVVSAICEQGCVDE 196

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
              L  ++   G +P +V++N ++  LC   + D+   L+  MV+    PN  T++TL+ 
Sbjct: 197 GVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIA 256

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             C  G   +  E    M   GC  D   Y  +I+G CK+   E A  +   M S G+KP
Sbjct: 257 YLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKP 316

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VV YNT+  GL    + E A  L  EM ++D   D  T+N  +D  C+NG +   +EL 
Sbjct: 317 NVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELL 376

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +    C  D+  Y  +I+G CK G ++ A+ L +++       + ++Y I++ GLC  
Sbjct: 377 EQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRA 436

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            +   A +L   M +    PN + F TLI+   +     + IELL +M      PD    
Sbjct: 437 ERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISY 496

Query: 370 SMVVDLL 376
           S V+D L
Sbjct: 497 STVIDGL 503



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 167/354 (47%), Gaps = 13/354 (3%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V YN +I G C+ G V  A+ L   +    + P+  TY  ++  LC      +A  +  E
Sbjct: 77  VAYNAMIAGYCRAGQVAAARRLAAAVP---VPPNAYTYFPIVRSLCARGLIADALTVLDE 133

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M  +G   +    +VI++  C+ G    A R L ++  +    ++   + ++   C  G 
Sbjct: 134 MPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGC 193

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           ++   EL   + S GC+ D VSYN ++ G C  K  ++   L  EMV  G  P V T+NT
Sbjct: 194 VDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNT 253

Query: 197 LFL-----GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           L       GLFE  QV  AL    +M       D   Y T IDG+CK+G+   A ++   
Sbjct: 254 LIAYLCRNGLFE--QVHEALS---QMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSR 308

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + ++  YN ++ GLC + R E A +L   + +     D VT+NI++   C +G 
Sbjct: 309 MPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGL 368

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +D+  +L   M E+   P+VI + T+I+GF +     + + LL  M      P+
Sbjct: 369 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPN 422



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 167/356 (46%), Gaps = 8/356 (2%)

Query: 20  NTIIDGLCKEG-FVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           + +I  LC  G   D A+AL     G+     VV YN++I G C A    +         
Sbjct: 48  SALIRSLCAAGRTADAARAL--DTAGDAAG--VVAYNAMIAGYCRAG---QVAAARRLAA 100

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
              V P+  T+  I+  LC  G + +A  +LD M  R           +++  C  G   
Sbjct: 101 AVPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A      + + GC  D  + N++++  C+   V+E + L R++ S G +P +V+YN + 
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            GL    + +   +L  EM R     + +T+NT I  LC+NG   +  E    +    C 
Sbjct: 221 KGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCT 280

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            D++ Y  +IDG+CK G  E+A ++   +P   L  +VV YN ++ GLC+  + ++A DL
Sbjct: 281 PDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDL 340

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +M +     + + F  L+  F +     +VIELL +M E   +PD    + V++
Sbjct: 341 LAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVIN 396



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 163/367 (44%), Gaps = 6/367 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PN  TY  I+  LC  G +  A  +  +M            + ++   C    +  A R
Sbjct: 105 PPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVR 164

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
               +  +G        N+++  +C+ G +DE   LL  +      P+  +Y+ ++ G C
Sbjct: 165 ALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLC 224

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN---KEVEEALSLYREMVSKGIKP 189
           +  + +  EEL   M  +GC  +  ++N LI   C+N   ++V EALS   +M   G  P
Sbjct: 225 MAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALS---QMPEHGCTP 281

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            +  Y T+  G+ +    E A  +   M    +  +   YNT + GLC      EA +L 
Sbjct: 282 DLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLL 341

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +    C LD   +N L+D  C++G ++  +EL   +     + DV+TY  +I+G C +
Sbjct: 342 AEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKE 401

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G +D+A  L  +M      PN I +  ++ G  R  +     EL+  M ++  +P+    
Sbjct: 402 GLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTF 461

Query: 370 SMVVDLL 376
           + +++ +
Sbjct: 462 NTLINFM 468


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 185/364 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +  TY TI+D L K   + +A AL  ++      P + TYN+L++GLC      EA 
Sbjct: 30  CTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 89

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +++D G  P VVT+  ++D L K  +  EA +L   M  R +  +   Y+ L+ G 
Sbjct: 90  DLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGL 149

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GKI +A  ++ +M S GC  D V+ + +I+G CK   +  A+ +++ M ++G+ P  
Sbjct: 150 LQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNE 209

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V Y+ L  GL +  +++ AL++  +M++     DT TYN  IDGLCK+G +  A   F  
Sbjct: 210 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDE 269

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ D+  YN LI G CK+G  + A  +F  +       +VVTY  +I GLC   Q
Sbjct: 270 MLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQ 329

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + KA   +  M+E    P+  ++ +L+ G  +  K      L  +M+   V    +   +
Sbjct: 330 LTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRL 389

Query: 372 VVDL 375
           +  L
Sbjct: 390 IFHL 393



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/359 (32%), Positives = 187/359 (52%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T++ +I+GL K G + +A +L  +        D+ TY +++  L       EA  L  ++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
              G  P++ T+N +++ LCK G+++EA  LL  +V     P+  TY++L+DG     + 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A +LF  M S G   D V Y  LI G  +  ++ +A S+Y+ M S+G  P VVT +T+
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL +  ++  A+++F+ M+   +A +   Y+  I GLCK   +  A+E+   +    C
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D   YN LIDGLCKSG +  A   F  +       DV TYNI+I G C  G  D A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +F DM  +  +PNV+ + TLI G  +  + +K       MKE+   PD+ + S +VD L
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGL 359



 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 185/366 (50%), Gaps = 6/366 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P   TYN +++GLCK G +++A  L  ++      PDVVTY SLI GL       EA 
Sbjct: 65  CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAY 124

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +LF EM  +G+    V +  ++  L + GK+ +AS +   M  +   P+  T ST++DG 
Sbjct: 125 KLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGL 184

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+I  A  +F SME+ G   ++V Y+ LI+G CK ++++ AL +  +M      P  
Sbjct: 185 CKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 244

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYN L  GL +   V  A   F+EM       D  TYN  I G CK G    A  +F  
Sbjct: 245 ITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD 304

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +C  ++  Y  LI GLCK  +L  A   ++ +  R    D   Y+ ++ GLC  G+
Sbjct: 305 MSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGK 364

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA----S 367
           ++    LF +ME + VA N      LI    + N+  + + L + ++ K+ MP      S
Sbjct: 365 LEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIR-KEGMPHPYAYNS 422

Query: 368 IVSMVV 373
           I+S ++
Sbjct: 423 IISALI 428



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/279 (34%), Positives = 151/279 (54%), Gaps = 8/279 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT +T+IDGLCK G +  A  +F  M+   + P+ V Y++LIHGLC A   + A 
Sbjct: 170 CVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 229

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  +M      P  +T+N+++D LCK+G +  A    D M++   +P+ +TY+ L+ GF
Sbjct: 230 EMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGF 289

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G  + A  +F  M S  C  + V+Y  LI+G CK +++ +A   Y+ M  +G  P  
Sbjct: 290 CKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDS 349

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF-- 249
             Y++L  GL +  ++E    LF+EM+R  VA ++ T    I  LCK   + EAV LF  
Sbjct: 350 FVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNA 408

Query: 250 -RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
            R  G+        AYN +I  L KSG++     +++ +
Sbjct: 409 IRKEGMPH----PYAYNSIISALIKSGKVNEGQAVYQEM 443


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 207/365 (56%), Gaps = 2/365 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  +Y T+I+G+ K G +  A  +F +M    +  DV  YN LI G     D+++ K 
Sbjct: 183 KPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKE 242

Query: 73  LFFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++  ++ D  V P+VVT+N++++ LCK G+ DE+  + + M + +   + FTYS+L+ G 
Sbjct: 243 IWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGL 302

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I+ A  ++  +       D V++N ++NG+C+  +++E+  L+  M  +  + TV
Sbjct: 303 CEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQ-TV 361

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+YN L  GLFE  +VE A+ ++E + +     +++TY   I GLCKNG + +A+++F+ 
Sbjct: 362 VSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKE 421

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                 +LD  AY+ ++DGLCK GR++ A+ +   + +R    D    N +I+G     +
Sbjct: 422 AEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASK 481

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           ++ A + F +ME    +P ++ + TLI G  +  + S+    + +M EK+  PD    S+
Sbjct: 482 LEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSL 541

Query: 372 VVDLL 376
           ++D L
Sbjct: 542 LMDGL 546



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 195/386 (50%), Gaps = 34/386 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTYN +I+GLCK G  D++  ++ +M       D+ TY+SLIHGLC A + + A R+
Sbjct: 255 PNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRV 314

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCK----------------------------------N 99
           + E+++  +    VT N +++  C+                                  N
Sbjct: 315 YKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFEN 374

Query: 100 GKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
           GK++EA  + +L+ ++  RP + TY  L+ G C  G++N+A ++F   E    K D  +Y
Sbjct: 375 GKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAY 434

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           + +++G CK   ++EA+S+  +M  +G K      N L  G     ++E A+  F EM+ 
Sbjct: 435 SSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMEC 494

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
              +    +YNT I GLCK     EA    + +   + + D+   + L+DGLC+  ++E+
Sbjct: 495 KGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEM 554

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           AL L++    +    D+  YNI++HGLC+  +++ A  L+  M+ +   PN++   TL+ 
Sbjct: 555 ALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLME 614

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPD 365
           G  ++    K  E+   + +  + PD
Sbjct: 615 GLYKVRDYEKASEIWDCILKDGLHPD 640



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 198/366 (54%), Gaps = 4/366 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDW 67
           GVV   +   YN +IDG  K G  DK K ++ ++ K  ++ P+VVTYN +I+GLC    +
Sbjct: 216 GVV--ADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRF 273

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +E+  ++  M     +  + T++ ++  LC+ G +D A R+   +V+  +  +A T++ +
Sbjct: 274 DESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAM 333

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++GFC  GKI  + EL+  M    C+   VSYNILI G  +N +VEEA+S++  +  KG 
Sbjct: 334 LNGFCRAGKIKESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKGC 392

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P   TY  L  GL +  ++  ALK+F+E +      D   Y++ +DGLCK G + EA+ 
Sbjct: 393 RPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAIS 452

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +   +     +LD    N LI+G  ++ +LE A+  FR +  +     +V+YN +I GLC
Sbjct: 453 IVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLC 512

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
              +  +A+    +M E    P++I    L+ G  +  K    + L  +  +K   PD +
Sbjct: 513 KAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDIT 572

Query: 368 IVSMVV 373
           + ++++
Sbjct: 573 MYNILM 578



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 195/359 (54%), Gaps = 1/359 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + VT+N +++G C+ G + ++  L++ M  EN    VV+YN LI GL       EA  ++
Sbjct: 326 DAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQT-VVSYNILIKGLFENGKVEEAISIW 384

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             +  +G +P   T+ V++  LCKNG++++A ++         + +A+ YS+++DG C  
Sbjct: 385 ELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKE 444

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+++ A  +   M+  G K D    N LING+ +  ++E+A++ +REM  KG  PT+V+Y
Sbjct: 445 GRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSY 504

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           NTL  GL +  +   A    +EM   +   D  T +  +DGLC+   I  A+ L++    
Sbjct: 505 NTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALD 564

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + DI  YN L+ GLC   +LE AL+L+  + R   V ++VT N ++ GL      +K
Sbjct: 565 KGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEK 624

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A +++  + ++ + P++I +   I G    ++ S  IE L+    + ++P A   +++V
Sbjct: 625 ASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILV 683



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 170/332 (51%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V+YN +I GL + G V++A +++  +  +   P+  TY  LIHGLC     N+A ++F E
Sbjct: 362 VSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKE 421

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
             D   +     ++ ++D LCK G+MDEA  +++ M +R  + +    + L++GF    K
Sbjct: 422 AEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASK 481

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +  A   F  ME  GC    VSYN LI G CK +   EA S  +EM+ K  KP ++T + 
Sbjct: 482 LEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSL 541

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  GL +  ++E AL L+++        D + YN  + GLC    + +A++L+  +    
Sbjct: 542 LMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRST 601

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
           C  ++   N L++GL K    E A E++  + +  L  D+++YNI I GLC+  ++  A 
Sbjct: 602 CVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAI 661

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
           +   D     + P  + +  L+   V     S
Sbjct: 662 EFLNDALNRGILPTAVTWNILVRAAVNFRTSS 693



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 197/360 (54%), Gaps = 7/360 (1%)

Query: 21  TIIDGLCKEGFVDKAKALFLQMKG-ENINPDVVTYNSLIHGLCHANDWNEAKRL--FFEM 77
           T+I    K    +KA   F  M+      P V +YN+L++     N+W+ A+    +FE 
Sbjct: 85  TVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFES 144

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           MD  V P++ T+N+++   CK  ++++A  LLD M  ++++P+ F+Y TL++G    G +
Sbjct: 145 MD--VSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDL 202

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNT 196
             A ++F  M   G   D   YN+LI+G+ K+ + ++   ++  +V    + P VVTYN 
Sbjct: 203 LGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNI 262

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  GL +  + + +L+++E M +++   D  TY++ I GLC+ G I  AV +++ +    
Sbjct: 263 MINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESS 322

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
             +D   +N +++G C++G+++ + EL+  + +      VV+YNI+I GL  +G++++A 
Sbjct: 323 LVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKEN-CQTVVSYNILIKGLFENGKVEEAI 381

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            ++  + +    P    +  LIHG  +  + +K +++  + ++     DA   S +VD L
Sbjct: 382 SIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGL 441



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 150/297 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P + TY  +I GLCK G ++KA  +F + +      D   Y+S++ GLC     +EA 
Sbjct: 392 CRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAI 451

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  +M  +G +      N +++   +  K+++A      M  +   P   +Y+TL+ G 
Sbjct: 452 SIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGL 511

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   + + A      M     K D ++ ++L++G C+ K++E AL+L+++ + KG KP +
Sbjct: 512 CKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDI 571

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             YN L  GL  + ++E AL+L+  M+R     +  T NT ++GL K     +A E++  
Sbjct: 572 TMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDC 631

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           +       DI +YN  I GLC   R+  A+E       R ++   VT+NI++    N
Sbjct: 632 ILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRAAVN 688


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 186/352 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+   Y TIIDG+CKEG ++ A  +  +M    + P+VV YN+L+ GLC A  W E +
Sbjct: 330 CTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETE 389

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM D+      VTFN+++D  C+NG +D    LL+ M++    P+  TY+T+++GF
Sbjct: 390 ELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGF 449

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I+ A  L  SM + GCK + +SY I++ G C  +   +A  L  +M+ +G     
Sbjct: 450 CKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNP 509

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +T+NTL   L +   VE A++L ++M  +  + D  +Y+T IDGL K G   EA+EL   
Sbjct: 510 ITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNV 569

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       +   Y+ +   L + GR+   +++F ++    + +D V YN +I  LC  G+
Sbjct: 570 MVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGE 629

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            ++A +    M  +   PN   +  LI G        +  E+L ++  K  +
Sbjct: 630 TERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 681



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 184/357 (51%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N +++ +C +G VD+A  L   +      PDVV+YN+++ GLC A  W   + L  EM+ 
Sbjct: 233 NLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR 292

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
               P++VTFN ++  LC+NG  +    +L  MV+    P+   Y+T++DG C  G +  
Sbjct: 293 MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEV 352

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A E+   M S G K + V YN L+ G C  +  EE   L  EM  K      VT+N L  
Sbjct: 353 AHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVD 412

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
              +   V+  ++L E+M       D  TY T I+G CK G I EAV L +++    C+ 
Sbjct: 413 FFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 472

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           +  +Y  ++ GLC + R   A +L   + ++    + +T+N +I+ LC  G +++A +L 
Sbjct: 473 NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 532

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             M  N  +P++I + T+I G  +  K  + +ELL+ M  K + P+  I S +   L
Sbjct: 533 KQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 589



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 191/366 (52%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + + C PN VT+NT+I  LC+ G  ++   +  QM      PD+  Y ++I G+C     
Sbjct: 291 VRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHL 350

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A  +   M   G++P+VV +N ++  LC   + +E   LL  M  +D   +  T++ L
Sbjct: 351 EVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNIL 410

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D FC  G ++R  EL   M   GC  D ++Y  +ING+CK   ++EA+ L + M + G 
Sbjct: 411 VDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGC 470

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP  ++Y  +  GL    +   A  L  +M +     +  T+NT I+ LCK G + +A+E
Sbjct: 471 KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIE 530

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L + + +  C  D+ +Y+ +IDGL K+G+ + ALEL   +  + +  + + Y+ +   L 
Sbjct: 531 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALS 590

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            +G+++K   +F ++++  +  + +++  +I    +  +  + IE L  M     +P+ S
Sbjct: 591 REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNES 650

Query: 368 IVSMVV 373
             ++++
Sbjct: 651 TYTILI 656



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 188/365 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ V+YN ++ GLC        + L  +M      P++VT+N+LI  LC    +    
Sbjct: 260 CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVH 319

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  +M++ G  P +  +  I+D +CK G ++ A  +L+ M    ++PN   Y+TL+ G 
Sbjct: 320 EVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGL 379

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +    EEL   M    C  DDV++NIL++ +C+N  V+  + L  +M+  G  P V
Sbjct: 380 CSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDV 439

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY T+  G  +   ++ A+ L + M       +T +Y   + GLC     V+A +L   
Sbjct: 440 ITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQ 499

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C L+   +N LI+ LCK G +E A+EL + +       D+++Y+ +I GL   G+
Sbjct: 500 MIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 559

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D+A +L   M    ++PN II+ ++     R  + +KVI++   +++  +  DA + + 
Sbjct: 560 TDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNA 619

Query: 372 VVDLL 376
           V+  L
Sbjct: 620 VISSL 624



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 168/365 (46%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P    Y+ I++  C+ G    A  +   +       DV   N +++ +C     +EA 
Sbjct: 190 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEAL 249

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  ++   G +P VV++N ++  LC   +      L++ MV+    PN  T++TL+   
Sbjct: 250 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 309

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G   R  E+   M   GC  D   Y  +I+G CK   +E A  +   M S G+KP V
Sbjct: 310 CRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNV 369

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YNTL  GL    + E   +L  EM   D   D  T+N  +D  C+NG +   +EL   
Sbjct: 370 VCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ 429

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  D+  Y  +I+G CK G ++ A+ L +S+       + ++Y I++ GLC+  +
Sbjct: 430 MLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAER 489

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
              A DL   M +     N I F TLI+   +     + IELL +M      PD    S 
Sbjct: 490 WVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 549

Query: 372 VVDLL 376
           V+D L
Sbjct: 550 VIDGL 554



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 178/373 (47%), Gaps = 12/373 (3%)

Query: 2   ANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGL 61
           A G GE G      +V  +++I  LC  G   +       +        VV YN+++ G 
Sbjct: 87  APGGGEGG------SVRLSSLIRSLCAAG---RTAEAARALSAAGGGAGVVAYNAMVAGY 137

Query: 62  CHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNA 121
           C A     A+RL   +    V P+  T+  ++  LC  G++ +A  +LD M +R   P  
Sbjct: 138 CRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIP 194

Query: 122 FTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 181
             Y  +++  C  G    A  +   + + GC  D  + N+++N  C    V+EAL L R+
Sbjct: 195 PMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRD 254

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           + S G +P VV+YN +  GL    +     +L EEM R     +  T+NT I  LC+NG 
Sbjct: 255 LPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGL 314

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
                E+   +    C  DI+ Y  +IDG+CK G LE+A E+   +P   L  +VV YN 
Sbjct: 315 FERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNT 374

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           ++ GLC+  + ++  +L  +M +     + + F  L+  F +     +VIELL +M E  
Sbjct: 375 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 434

Query: 362 VMPDASIVSMVVD 374
            MPD    + V++
Sbjct: 435 CMPDVITYTTVIN 447



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 170/361 (47%), Gaps = 15/361 (4%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           YN ++ G C+ G ++ A+ L   +    + P+  TY  ++  LC      +A  +  EM 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            +G  P    ++VI++  C+ G    A R+L+ +  R    +    + +++  C  G ++
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A  L   + S GC+ D VSYN ++ G C  K       L  EMV     P +VT+NTL 
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 199 L-----GLFE-IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
                 GLFE +H+V        +M       D   Y T IDG+CK G++  A E+   +
Sbjct: 307 SYLCRNGLFERVHEV------LAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRM 360

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + ++  YN L+ GLC + R E   EL   +  +    D VT+NI++   C +G +
Sbjct: 361 PSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLV 420

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+  +L   M E+   P+VI + T+I+GF +     + + LL  M      P+    ++V
Sbjct: 421 DRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIV 480

Query: 373 V 373
           +
Sbjct: 481 L 481



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 159/352 (45%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
            V   PN  TY  ++  LC  G +  A A+  +M      P    Y+ ++   C    + 
Sbjct: 152 AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFR 211

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A R+  ++  +G    V   N++++ +C  G +DEA  LL  +      P+  +Y+ ++
Sbjct: 212 SAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVL 271

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C+  +    +EL   M  M C  + V++N LI+  C+N   E    +  +MV  G  
Sbjct: 272 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCT 331

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P +  Y T+  G+ +   +E A ++   M    +  +   YNT + GLC      E  EL
Sbjct: 332 PDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 391

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +    C LD   +N L+D  C++G ++  +EL   +     + DV+TY  +I+G C 
Sbjct: 392 LAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCK 451

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +G +D+A  L   M      PN I +  ++ G     +     +L+ +M ++
Sbjct: 452 EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQ 503


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 200/365 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +  TY+ +I+ LCK   VD+A  +F +MK E + P +  Y +L+  L      + A 
Sbjct: 629 CVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFAL 688

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++F E+ +  + P    +N++++ L K+ ++DEA +L+D M  +++ P+ FTY++L+DG 
Sbjct: 689 QIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGL 748

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
             +G++  A  +F  M   G + D V+Y  L++   K  ++  AL ++R M  K   P V
Sbjct: 749 GKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDV 808

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY++L   L +  +VE A   FE         +   Y++ ID   K G +  A+ELF  
Sbjct: 809 VTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEE 868

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +C  +I  YN L+ GL K+GRL +A +L   + +   V D+VTYNI+I G+   G 
Sbjct: 869 MQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGM 928

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A   F  M+E  + P+VI F +LI    +++K  +  EL   M+E+   P     ++
Sbjct: 929 VDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNV 988

Query: 372 VVDLL 376
           ++D+L
Sbjct: 989 LIDIL 993



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 219/438 (50%), Gaps = 66/438 (15%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           NG   + C PN VTY T+++GL K G +++A  +F++MK  N +PD + YN+LI GL  A
Sbjct: 346 NGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKA 405

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
            + + A  LF EM D+G+ P++ T+N+++  L K G+  EA +L   + ++   P+ FTY
Sbjct: 406 GEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTY 465

Query: 125 STLMDGFCLTGKINRAEELF---------------------GSME---------SMGCKH 154
           +TL+D     G++++   +                      G++E         S+G K 
Sbjct: 466 NTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKS 525

Query: 155 -DDVSYNILINGYCKNKEV-----------------------------------EEALSL 178
             +++YN L++ +  N  V                                   +EA+SL
Sbjct: 526 LGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSL 585

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
            REM  +G +P+VVTY++L    ++  Q E +L LF+EM R    AD STY+  I+ LCK
Sbjct: 586 LREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCK 645

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           +  + +A+++F  +     E  +  Y  L+  L K  +++ AL++F  L    LV D   
Sbjct: 646 SDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFV 705

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           YNIM++GL    ++D+A  L   M+   + P++  + +L+ G  +  +  +   +  KM 
Sbjct: 706 YNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMT 765

Query: 359 EKKVMPDASIVSMVVDLL 376
           E+   PD    + ++D+L
Sbjct: 766 EEGHEPDVVAYTSLMDVL 783



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 193/349 (55%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           +TYNT++      G VD+A  L   MK     P VVTY +L+ GL  A   +EA  L  E
Sbjct: 529 ITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLRE 588

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M  QG +PSVVT++ +M    K  + +E+  L D MV++    +  TYS +++  C +  
Sbjct: 589 MEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDD 648

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +++A ++FG M+  G +    +Y  L++   K+++++ AL ++ E+    + P    YN 
Sbjct: 649 VDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNI 708

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  GL + ++V+ A KL + M+  ++  D  TY + +DGL K+G + EA  +F  +    
Sbjct: 709 MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            E D+ AY  L+D L K G+L  AL +FR++ ++  V DVVTY+ +I  L  +G++++A+
Sbjct: 769 HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             F +       PNV ++ +LI  F +     + +EL  +M+ ++  P+
Sbjct: 829 YFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPN 877



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 191/364 (52%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            +P    Y T++  L K+  +D A  +F +++  ++ PD   YN +++GL  +N  +EA +
Sbjct: 665  EPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACK 724

Query: 73   LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            L   M +Q + P + T+  ++D L K+G+++EA  +   M +    P+   Y++LMD   
Sbjct: 725  LVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLG 784

Query: 133  LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              GK++ A  +F +M    C  D V+Y+ LI+   K   VEEA   +   +SKG  P V 
Sbjct: 785  KGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVG 844

Query: 193  TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
             Y++L     +   V+ AL+LFEEMQR     +  TYN  + GL K G +  A +L   +
Sbjct: 845  VYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEM 904

Query: 253  GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + C  D+  YN LIDG+ K G ++ A   F+ +  + +V DV+T+  +I  L    ++
Sbjct: 905  EKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKL 964

Query: 313  DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             +A +LF  MEE    P+V+ +  LI    R  K  +   + H+MK K  MPD   + ++
Sbjct: 965  LEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024

Query: 373  VDLL 376
              +L
Sbjct: 1025 KRIL 1028



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 190/403 (47%), Gaps = 45/403 (11%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+T  YN +++ L K GF   A  +F ++    I PD  T+   +H    +   + A 
Sbjct: 248 CNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAA 307

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
               EM+  G+ P V TF V++D L K+G +DEA +  + M      PN  TY+TL++G 
Sbjct: 308 EPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGL 367

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G++  A E+F  M+   C  D ++YN LI+G  K  E + A  L++EM  +G+ P +
Sbjct: 368 AKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNL 427

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY-------IVE 244
            TYN +   L +  +   A +LF +++      D  TYNT ID L K G        I E
Sbjct: 428 RTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKE 487

Query: 245 AVEL-------------------------------FRTLGILKCELDIQAYNCLIDGLCK 273
            VE                                F++LG +        YN L+     
Sbjct: 488 MVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEI-------TYNTLMSAFIH 540

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           +G ++ A++L   + +   +  VVTY  ++ GL   G++D+A  L  +ME+    P+V+ 
Sbjct: 541 NGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVT 600

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + +L+  F + ++  + + L  +M  K  + D S  S+V++ L
Sbjct: 601 YSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCL 643



 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 196/394 (49%), Gaps = 31/394 (7%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN +I  L K G   +A  LF  +K +   PDV TYN+LI  L      ++   +
Sbjct: 425 PNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAI 484

Query: 74  FFEMMDQGVQ------------------------PSV-------VTFNVIMDELCKNGKM 102
             EM+++G +                        PS+       +T+N +M     NG +
Sbjct: 485 IKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHV 544

Query: 103 DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
           DEA +LL++M + +  P   TY+TL+DG    G+++ A  L   ME  GC+   V+Y+ L
Sbjct: 545 DEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSL 604

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           +  + K  + EE+LSL+ EMV KG    V TY+ +   L +   V+ AL +F  M+ + +
Sbjct: 605 MASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGM 664

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
                 Y T +  L K+  I  A+++F  L       D   YN +++GL KS R++ A +
Sbjct: 665 EPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACK 724

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           L  S+  + ++ D+ TY  ++ GL   G++++A ++F  M E    P+V+ + +L+    
Sbjct: 725 LVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLG 784

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +  K S  + +   M +K+ +PD    S ++D L
Sbjct: 785 KGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSL 818



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 170/370 (45%), Gaps = 31/370 (8%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           V  A  +F QMK    NP    YN ++  L     ++ A  +F ++    +QP   TF +
Sbjct: 233 VSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRI 292

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
            +    ++G++D A+  +  M++  + P   T++ L+D    +G I+ A + F  M+++ 
Sbjct: 293 FVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLR 352

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
           C  + V+Y  L+NG  K   +EEA  ++ EM      P  + YNTL  GL +  + + A 
Sbjct: 353 CSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMAC 412

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            LF+EM+   +  +  TYN  I  L K G   EA +LF  L       D+  YN LID L
Sbjct: 413 GLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVL 472

Query: 272 CKSGRLEIALELFRSLPRR----VLVADV---------------------------VTYN 300
            K G+++  L + + +  +    ++  D                            +TYN
Sbjct: 473 GKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYN 532

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            ++    ++G +D+A  L   M+++   P V+ + TL+ G  +  +  + + LL +M+++
Sbjct: 533 TLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQ 592

Query: 361 KVMPDASIVS 370
              P     S
Sbjct: 593 GCEPSVVTYS 602



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 149/310 (48%)

Query: 51  VVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD 110
           V TY  +I  L  A + +   ++   M  +G + S+     ++        +  A  + +
Sbjct: 182 VGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFN 241

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
            M      P+   Y+ +++     G  + A  +FG +     + D  ++ I ++ + ++ 
Sbjct: 242 QMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSG 301

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
            ++ A    +EM+  GI P V T+  L   L +   ++ A K F  M+    + +  TY 
Sbjct: 302 RLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYT 361

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           T ++GL K G + EA E+F  +    C  D  AYN LIDGL K+G  ++A  LF+ +  R
Sbjct: 362 TLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDR 421

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
            LV ++ TYNIMI  L   G+  +A  LF D++E    P+V  + TLI    +  +  KV
Sbjct: 422 GLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKV 481

Query: 351 IELLHKMKEK 360
           + ++ +M EK
Sbjct: 482 LAIIKEMVEK 491



 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 169/390 (43%), Gaps = 31/390 (7%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY  +I  L      D    +   M  E     +    SL+      N+ + A  +F +M
Sbjct: 184 TYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQM 243

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
              G  PS   +N +++ L K G    A  +   + Q  ++P+A T+   +  F  +G++
Sbjct: 244 KSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRL 303

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A E    M   G      ++ +LI+   K+  ++EA   +  M +    P VVTY TL
Sbjct: 304 DPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTL 363

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL +  ++E A ++F EM+ ++ + D   YNT IDGL K G    A  LF+ +     
Sbjct: 364 VNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGL 423

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             +++ YN +I  L K+GR   A +LF  L  +  V DV TYN +I  L   GQMDK   
Sbjct: 424 VPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLA 483

Query: 318 LFLDMEENAVA------------------------PNV-------IIFVTLIHGFVRINK 346
           +  +M E                            P++       I + TL+  F+    
Sbjct: 484 IIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGH 543

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             + ++LL  MK+ + +P     + +VD L
Sbjct: 544 VDEAVKLLEVMKKHECIPTVVTYTTLVDGL 573



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 145/307 (47%), Gaps = 2/307 (0%)

Query: 72  RLFFEMMDQ--GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           + FF    Q  G   +V T+ +++  L    + D   ++L  M +   R +    ++L+ 
Sbjct: 166 KCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLR 225

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            F  T  ++ A E+F  M+S GC      YN ++    K      A+ ++ ++    I+P
Sbjct: 226 TFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQP 285

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
              T+           +++ A +  +EM +  +     T+   ID L K+G I EA + F
Sbjct: 286 DAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFF 345

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +  L+C  ++  Y  L++GL K+GRLE A E+F  +       D + YN +I GL   
Sbjct: 346 NGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKA 405

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G+ D A  LF +M++  + PN+  +  +I    +  +  +  +L H +KE+  +PD    
Sbjct: 406 GEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTY 465

Query: 370 SMVVDLL 376
           + ++D+L
Sbjct: 466 NTLIDVL 472



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 111/201 (55%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            C PN   Y+++ID   K+G VD+A  LF +M+     P++VTYN+L+ GL  A   N A+
Sbjct: 839  CTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAE 898

Query: 72   RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +L  EM   G  P +VT+N+++D + K G +DEA      M ++ + P+  T+++L++  
Sbjct: 899  KLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESL 958

Query: 132  CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
                K+  A ELF SME  G     V+YN+LI+   +  +V EA  ++ EM  KG  P  
Sbjct: 959  GKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDG 1018

Query: 192  VTYNTLFLGLFEIHQVEHALK 212
            +T   +   L    Q  HAL+
Sbjct: 1019 ITIGIMKRILSVREQQFHALE 1039



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 71/114 (62%)

Query: 10   VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
            V C P+ VTYN +IDG+ K G VD+A++ F +MK + I PDV+T+ SLI  L   +   E
Sbjct: 907  VGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLE 966

Query: 70   AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
            A  LF  M ++G  PSVVT+NV++D L + GK+ EA+ +   M  +   P+  T
Sbjct: 967  ACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGIT 1020


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 193/362 (53%), Gaps = 1/362 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMK-GENINPDVVTYNSLIHGLCHANDWNEAKR 72
           PN VTY  ++ G CKEG +++A+ +  ++K  E I  D V Y +LI+G C      +A R
Sbjct: 232 PNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANR 291

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM+D GVQ ++  +N +++  CK G+M E  +LL     R V  + ++Y+TL+DG+C
Sbjct: 292 VRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYC 351

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G + +A E    M   G     ++YN L+NG+C    +++AL L+  M+ +G+ P  +
Sbjct: 352 RKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEI 411

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           + +TL  G F+  + E AL L++E     +A +  T NT I+GLCKN  + EA ELF  +
Sbjct: 412 SCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRM 471

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D   Y  LIDG CK G L  A ++   +     V  V  +N  I GL    Q 
Sbjct: 472 KEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQS 531

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            K +D+ ++M    ++PN + +  LI G+ +         L  +M EK + P+  I S++
Sbjct: 532 GKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVL 591

Query: 373 VD 374
           V 
Sbjct: 592 VS 593



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 184/379 (48%), Gaps = 26/379 (6%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +++TY T+IDG CK G + +A  + ++M+     P V  +NS I GL  A    +  
Sbjct: 476 CPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVN 535

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  EM  +G+ P+ VT+  ++   CK G + +A  L   MV++ ++PN F  S L+  F
Sbjct: 536 DIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCF 595

Query: 132 CLTGKINRAEELFGSM-----------------------ESM-GCKHDD--VSYNILING 165
              GK++ A  +   +                       ES+ G  H    + +NI+I G
Sbjct: 596 YREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILG 655

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
            CK   V +A +L+ ++  KG  P   TY++L  G      ++ A  L +EM    +  +
Sbjct: 656 LCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPN 715

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
             TYN+ I GLCK+  +  AV LF  L       +   YN LIDG CK G    A +L +
Sbjct: 716 IVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQ 775

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            + +  +   V TY I+IHGLC  G M++A  L   M EN V PN I + TLI G+ R  
Sbjct: 776 KMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCG 835

Query: 346 KPSKVIELLHKMKEKKVMP 364
               + +L ++M    ++P
Sbjct: 836 NMKAITKLYNEMHICGLLP 854



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 192/419 (45%), Gaps = 61/419 (14%)

Query: 16  TVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFF 75
           T+TYNT+++G C  G +D A  L+  M    + P+ ++ ++L+ G   A    +A  L+ 
Sbjct: 375 TLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWK 434

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
           E + +G+  +VVT N +++ LCKN +M EA  L   M +     ++ TY TL+DG+C  G
Sbjct: 435 ETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLG 494

Query: 136 KINRAE---------------ELFGS--------------------MESMGCKHDDVSYN 160
            + RA                E+F S                    M + G   + V+Y 
Sbjct: 495 DLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYG 554

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            LI G+CK   + +A  LY EMV KG+KP +   + L    +   +V+ A  + +++   
Sbjct: 555 ALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADT 614

Query: 221 DVAADTST--------------------------YNTFIDGLCKNGYIVEAVELFRTLGI 254
           D+  D S                           +N  I GLCK G + +A  LF  L +
Sbjct: 615 DMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKV 674

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D   Y+ LI G   SG +++A  L   +    L  ++VTYN +I+GLC    + +
Sbjct: 675 KGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSR 734

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A  LF  ++   ++PN I + TLI G  +    ++  +L  KM ++ + P     ++++
Sbjct: 735 AVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILI 793



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 172/363 (47%), Gaps = 1/363 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +  +++ ++      G +  A  +F +M        + + N L++ L  A D   A  +F
Sbjct: 93  SAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVF 152

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M   G  P   T  ++    C++G++  A+  L  M +  +  N   Y  +MDG+C  
Sbjct: 153 QQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRI 212

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV-SKGIKPTVVT 193
           G+   A +L  S++  G   + V+Y +L+ GYCK   +EEA  + +E+  ++ I    V 
Sbjct: 213 GQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVA 272

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G  +  ++E A ++ +EM    V  +   YNT I+G CK G + E  +L +   
Sbjct: 273 YGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANE 332

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                LD  +YN L+DG C+ G +  A E    + R       +TYN +++G C+ G +D
Sbjct: 333 YRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAID 392

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L+  M +  V PN I   TL+ GF +  K  + + L  +   + +  +   ++ V+
Sbjct: 393 DALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVI 452

Query: 374 DLL 376
           + L
Sbjct: 453 NGL 455



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 126/263 (47%), Gaps = 1/263 (0%)

Query: 113 VQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
           V +D   +A ++  L+      G++  A  +F  M   G +    S N L+N   +  ++
Sbjct: 86  VYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDI 145

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
             A++++++M   G  P   T   +        +V HA    +EM+   +  +   Y+  
Sbjct: 146 GTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAV 205

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR-RV 291
           +DG C+ G    A +L  +L +     ++  Y  L+ G CK GR+E A ++ + +     
Sbjct: 206 MDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEK 265

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           +V D V Y  +I+G C  G+M+ A+ +  +M +  V  N+ ++ T+I+G+ ++ +  +V 
Sbjct: 266 IVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVE 325

Query: 352 ELLHKMKEKKVMPDASIVSMVVD 374
           +LL   + + V  D    + +VD
Sbjct: 326 KLLQANEYRGVNLDEYSYNTLVD 348



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P   TY  +I GLC +G++++A  L  QM   N++P+ +TY +LI G     +     +
Sbjct: 783 QPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITK 842

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           L+ EM   G+ P+  T +V   E   N K
Sbjct: 843 LYNEMHICGLLPANWTGHVKQAEPVVNSK 871


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 115/349 (32%), Positives = 186/349 (53%), Gaps = 2/349 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN VTY+ +ID  CK G V +   L  +M+ E +  DV  Y+SLI   C   D    +
Sbjct: 181 CRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGR 240

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+ + V P+VVT++ +M  L + G+  EAS +L  M  R VRP+   Y+ L DG 
Sbjct: 241 ELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGL 300

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+   A ++   M   G +   ++YN+++NG CK   +++A  +   MV KG KP  
Sbjct: 301 CKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDA 360

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEM--QRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           VTYNTL  GL    ++  A+ L++ +  ++  V  D  T N  I GLCK G + +A  + 
Sbjct: 361 VTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIH 420

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
            ++  +  + +I  YN LI+G   + +L  AL+L++         + +TY++MI+GLC  
Sbjct: 421 SSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKM 480

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
             +  A  LF  M+++ + P VI +  L+    R +   +   L  +M+
Sbjct: 481 QMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMR 529



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/354 (33%), Positives = 187/354 (52%), Gaps = 3/354 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMK-GENINPDVVTYNSLIHGLCHANDWNEAKR 72
           P+ VTYNT+++G CK   + +A+ LF  MK G +  P++VTY+ LI   C + +  E   
Sbjct: 147 PDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLG 206

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  +G++  V  ++ ++   C  G ++    L D M++R V PN  TYS LM G  
Sbjct: 207 LLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLG 266

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            TG+   A E+   M + G + D V+Y +L +G CKN    +A+ +   MV KG +P  +
Sbjct: 267 RTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTL 326

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN +  GL +  +++ A  + E M +     D  TYNT + GLC  G I EA++L++ L
Sbjct: 327 TYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLL 386

Query: 253 GILKCELDIQAYNC--LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
              K  +    + C  LI GLCK GR+  A  +  S+    L  ++VTYN +I G     
Sbjct: 387 LSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAAR 446

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           ++ +A  L+    E+  +PN + +  +I+G  ++   S    L  KMK+  + P
Sbjct: 447 KLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRP 500



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 205/400 (51%), Gaps = 37/400 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY+ ++ GL + G   +A  +   M    + PDVV Y  L  GLC      +A ++
Sbjct: 253 PNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKV 312

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+ +G +P  +T+NV+++ LCK  +MD+A  ++++MV++  +P+A TY+TL+ G C 
Sbjct: 313 LDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCG 372

Query: 134 TGKINRAEELF-------------------------------------GSMESMGCKHDD 156
            GKI+ A +L+                                      SM  MG + + 
Sbjct: 373 AGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNI 432

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           V+YN LI GY   +++ EAL L++  V  G  P  +TY+ +  GL ++  +  A  LF +
Sbjct: 433 VTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCK 492

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M+   +      YN  +  LC+   + +A  LF+ +  +   +D+ ++N +IDG  K+G 
Sbjct: 493 MKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGD 552

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           ++ A EL   +    LV D VT++I+I+     G +D+A  L+  M      P V++F +
Sbjct: 553 VKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDS 612

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           L+ G+    +  K+I LLH+M +K V+ D+ + S ++  L
Sbjct: 613 LLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACL 652



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 184/350 (52%), Gaps = 2/350 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P T+TYN +++GLCKE  +D A  +   M  +   PD VTYN+L+ GLC A   +EA  
Sbjct: 322 EPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMD 381

Query: 73  LFFEMMDQG--VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           L+  ++ +   V+P V T N ++  LCK G++ +A+R+   MV+  ++ N  TY+ L++G
Sbjct: 382 LWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEG 441

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +    K+  A +L+      G   + ++Y+++ING CK + +  A  L+ +M   GI+PT
Sbjct: 442 YLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPT 501

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V+ YN L   L     +E A  LF+EM+  +   D  ++N  IDG  K G +  A EL  
Sbjct: 502 VIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLS 561

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            + ++    D   ++ LI+   K G L+ A+ L+  +     V  VV ++ ++ G    G
Sbjct: 562 EMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKG 621

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           + +K   L   M +  V  +  +  T++     +++   V ++L K  ++
Sbjct: 622 ETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKFSQQ 671



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 185/358 (51%), Gaps = 7/358 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+    +T+ID L K    D   +++ +M    + P   + ++L     + +  + A  +
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD---VRPNAFTYSTLMDG 130
              M  +G   +V   N+++   C++G+ D+A  L   M +R+   V P+  TY+TL++G
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQM-KRNYDCVVPDCVTYNTLVNG 158

Query: 131 FCLTGKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           FC   ++  A  LF +M+  G C+ + V+Y++LI+ YCK+ EV E L L  EM  +G+K 
Sbjct: 159 FCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKA 218

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V  Y++L         +E   +LF+EM R  V+ +  TY+  + GL + G   EA E+ 
Sbjct: 219 DVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEML 278

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + +       D+ AY  L DGLCK+GR   A+++   + ++      +TYN++++GLC +
Sbjct: 279 KDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKE 338

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK--VMPD 365
            +MD A  +   M +    P+ + + TL+ G     K  + ++L   +  +K  V PD
Sbjct: 339 DRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPD 396



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 155/327 (47%), Gaps = 7/327 (2%)

Query: 55  NSLIHGLCHANDWNEAKRLFFEMMDQ--GVQPSVVTFNVIMDELCKNGKMDEASRLLDLM 112
           +S+ H   H+   ++A  LF   +D      PS    + ++D L K  + D    +   M
Sbjct: 11  SSIAHTQPHS--LSDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKM 68

Query: 113 VQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
           V   V P   + S L + F  T   + A  +   M   G   +  + N+++ G+C++ + 
Sbjct: 69  VSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQC 128

Query: 173 EEALSLYREMVSK--GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTY 229
           ++A+SL+ +M      + P  VTYNTL  G  +  ++  A  LFE M++  D   +  TY
Sbjct: 129 DKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTY 188

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           +  ID  CK+G + E + L   +     + D+  Y+ LI   C  G +E   ELF  + R
Sbjct: 189 SVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLR 248

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
           R +  +VVTY+ ++ GL   G+  +A ++  DM    V P+V+ +  L  G  +  +   
Sbjct: 249 RKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGD 308

Query: 350 VIELLHKMKEKKVMPDASIVSMVVDLL 376
            I++L  M +K   P     ++VV+ L
Sbjct: 309 AIKVLDLMVQKGEEPGTLTYNVVVNGL 335


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 193/364 (53%), Gaps = 4/364 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+T TYN +IDG  K   + KA  L  +MK   + P   TY+ LI GLCH++D  +A  
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M+  GV+P+V  +  ++    +  + + A  LL +M+   V P+ F Y+ L+ G C
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K+  A+ L   M   G K +  +Y   IN Y K+ E++ A   +++M+S GI P  V
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y  L  G  ++     AL  F+ M    +  D   Y+  I  L KNG   EA+ +F  L
Sbjct: 593 IYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF--L 650

Query: 253 GILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             LK  +  D+  YN LI G CK G +E A +L+  +    +  ++V YN +I+GLC  G
Sbjct: 651 KFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLG 710

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++ KA +LF ++EE  + P+V+ + T+I G+ +    ++  +L  +M  K + PD  I  
Sbjct: 711 EVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYC 770

Query: 371 MVVD 374
           +++D
Sbjct: 771 ILID 774



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/361 (34%), Positives = 186/361 (51%), Gaps = 3/361 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE G+  KPN  TY   I+   K G +  A+  F  M    I P+ V Y  LI G C   
Sbjct: 548 GEKGI--KPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVG 605

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
           +  EA   F  M+++G+ P +  ++ I+  L KNGK  EA  +    ++  V P+ F Y+
Sbjct: 606 NTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYN 665

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           +L+ GFC  G I +A +L+  M   G   + V YN LING CK  EV +A  L+ E+  K
Sbjct: 666 SLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEK 725

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            + P VVTY+T+  G  +   +  A KLF+EM    ++ D   Y   IDG  K G + +A
Sbjct: 726 DLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKA 785

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           + LF      K    + A+N LID  CK G++  A ELF  +  + L  ++VTY I+I  
Sbjct: 786 LSLFHE-AQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDA 844

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
                 M++A  LFLDME   + PN + + +L+  + +I    K+I L   M+ + +  D
Sbjct: 845 YGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACD 904

Query: 366 A 366
           A
Sbjct: 905 A 905



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 201/431 (46%), Gaps = 70/431 (16%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINP------------------------ 49
           P+  TY  ++DG CK+    +AK +F  M    +NP                        
Sbjct: 309 PDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRI 368

Query: 50  -----------DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                      +VVTYN++I G+  A +  +A  LF EM+  G++P   T+N+++D   K
Sbjct: 369 KDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLK 428

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           +  M +A  LL  M  R + P+ FTYS L+ G C +  + +A E+   M   G K +   
Sbjct: 429 SHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFM 488

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y  LI  Y +    E A+ L + M++ G+ P +  YN L +GL    +VE A  L  +M 
Sbjct: 489 YGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMG 548

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFR---------------------------- 250
              +  +  TY  FI+   K+G I  A   F+                            
Sbjct: 549 EKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTV 608

Query: 251 -TLGILKCEL------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
             L   KC L      DI+AY+ +I  L K+G+ + A+ +F    +  +V DV  YN +I
Sbjct: 609 EALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLI 668

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            G C +G ++KA  L+ +M  N + PN++++ TLI+G  ++ + +K  EL  +++EK ++
Sbjct: 669 SGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLV 728

Query: 364 PDASIVSMVVD 374
           PD    S ++D
Sbjct: 729 PDVVTYSTIID 739



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/343 (33%), Positives = 181/343 (52%), Gaps = 1/343 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y  +I G C  G   +A + F  M  + + PD+  Y+++IH L       EA  +
Sbjct: 589 PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGV 648

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F + +  GV P V  +N ++   CK G +++AS+L D M+   + PN   Y+TL++G C 
Sbjct: 649 FLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCK 708

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++ +A ELF  +E      D V+Y+ +I+GYCK+  + EA  L+ EM+SKGI P    
Sbjct: 709 LGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYI 768

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G  +   +E AL LF E Q+  V +  S +N+ ID  CK+G ++EA ELF  + 
Sbjct: 769 YCILIDGCGKEGNLEKALSLFHEAQQKSVGS-LSAFNSLIDSFCKHGKVIEARELFDDMV 827

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K   +I  Y  LID   K+  +E A +LF  +  R ++ + +TY  ++      G   
Sbjct: 828 DKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRF 887

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           K   LF DME   +A + I +  +   + +  K  + ++LL+K
Sbjct: 888 KMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNK 930



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 186/368 (50%), Gaps = 6/368 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN  TYN  I GLC+ G VD+A  +   M  + + PD  TY  L+ G C      EAK
Sbjct: 272 CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAK 331

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M   G+ P+  T+  ++D   K G ++EA R+ D M+ R ++ N  TY+ ++ G 
Sbjct: 332 LIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGI 391

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G++ +A  LF  M   G + D  +YN+LI+GY K+ ++ +A  L  EM ++ + P+ 
Sbjct: 392 AKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSP 451

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY+ L  GL     ++ A ++ ++M R+ V  +   Y T I    +      A+EL + 
Sbjct: 452 FTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKI 511

Query: 252 L---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           +   G+L    D+  YNCLI GLC++ ++E A  L   +  + +  +  TY   I+    
Sbjct: 512 MIANGVLP---DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G++  A   F DM  + + PN +I+  LI G   +    + +     M EK ++PD   
Sbjct: 569 SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA 628

Query: 369 VSMVVDLL 376
            S ++  L
Sbjct: 629 YSAIIHSL 636



 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 181/351 (51%), Gaps = 1/351 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N   ++  ID     GF+++A ++F+    E   P ++  N+L+  L  AN      +++
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M++  + P V T+  ++   CK G + +   +L  M +++ +PN FTY+  + G C T
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQT 289

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G ++ A E+   M   G   D  +Y +L++G+CK K  +EA  ++  M S G+ P   TY
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  G  +   +E AL++ +EM    +  +  TYN  I G+ K G + +A+ LF  + +
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              E D   YN LIDG  KS  +  A EL   +  R L     TY+++I GLC+   + K
Sbjct: 410 AGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQK 469

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           A+++   M  N V PNV ++ TLI  +V+ ++    IELL  M    V+PD
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD 520



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 182/362 (50%), Gaps = 1/362 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  +  N ++  L K   +     ++  M    I PDV TY ++I   C   D  + K +
Sbjct: 205 PTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMV 264

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM ++  +P++ T+N  +  LC+ G +DEA  +  LM+++ + P+  TY+ L+DGFC 
Sbjct: 265 LSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCK 323

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +   A+ +F SM S G   +  +Y  LI+G+ K   +EEAL +  EM+++G+K  VVT
Sbjct: 324 QKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVT 383

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  G+ +  ++  A+ LF EM    +  DT TYN  IDG  K+  + +A EL   + 
Sbjct: 384 YNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMK 443

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K       Y+ LI GLC S  L+ A E+   + R  +  +V  Y  +I     + + +
Sbjct: 444 ARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYE 503

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A +L   M  N V P++  +  LI G  R  K  +   LL  M EK + P+A      +
Sbjct: 504 MAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFI 563

Query: 374 DL 375
           +L
Sbjct: 564 NL 565



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 196/357 (54%), Gaps = 12/357 (3%)

Query: 7    EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            + GVV  P+   YN++I G CKEG ++KA  L+ +M    INP++V YN+LI+GLC   +
Sbjct: 654  KTGVV--PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGE 711

Query: 67   WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
              +A+ LF E+ ++ + P VVT++ I+D  CK+G + EA +L D M+ + + P+ + Y  
Sbjct: 712  VTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCI 771

Query: 127  LMDGFCLTGKINRAEELF--GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
            L+DG    G + +A  LF     +S+G      ++N LI+ +CK+ +V EA  L+ +MV 
Sbjct: 772  LIDGCGKEGNLEKALSLFHEAQQKSVGSLS---AFNSLIDSFCKHGKVIEARELFDDMVD 828

Query: 185  KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
            K + P +VTY  L     +   +E A +LF +M+  ++  +T TY + +    + G   +
Sbjct: 829  KKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFK 888

Query: 245  AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF-RSLPRRVLVADVVTYNIMI 303
             + LF+ +       D  AY  +    CK G+   AL+L  +SL   + + D V ++ +I
Sbjct: 889  MISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDV-FDALI 947

Query: 304  HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI---NKPSKVIELLHKM 357
              LC + Q+    +L  +M +  ++ +     TL+ GF +    ++ SKV+ ++ ++
Sbjct: 948  FHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRL 1004



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 68/138 (49%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            PNT+TY +++    + G   K  +LF  M+   I  D + Y  +    C      EA +L
Sbjct: 868  PNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKL 927

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              + + +G++     F+ ++  LCK  ++     LL  M + ++  ++ T +TL+ GF  
Sbjct: 928  LNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYK 987

Query: 134  TGKINRAEELFGSMESMG 151
            +G  + A ++ G M+ +G
Sbjct: 988  SGNEDEASKVLGVMQRLG 1005


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 190/356 (53%), Gaps = 1/356 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G I   CKP+ VTYNT+I G C++G V +A  L  Q  G+ + P+  +Y  LIH  C   
Sbjct: 334 GMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQG 393

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            ++ A     EM ++G +P +VT+  ++  L   G++D A  + + M++R V P+A  Y+
Sbjct: 394 GYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYN 453

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            LM G C   K+  A+ L   M       D   Y  L++G+ +N  ++EA  L+   + K
Sbjct: 454 ILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEK 513

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G+ P +V YN +  G  +   ++ A+     M++  +A D  TY+T IDG  K   +  A
Sbjct: 514 GMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGA 573

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            ++FR +  +KC+ ++  Y  LI+G C+ G L  +L++FR +    LV +VVTY+I+I  
Sbjct: 574 QKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGS 633

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
            C + ++  A   F +M  N   PN + F  L++GF + N    + E  ++ +E K
Sbjct: 634 FCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSK-NGTRAISEKGNEFQENK 688



 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 195/400 (48%), Gaps = 35/400 (8%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C PN + YNT+IDG CK+G ++ A  LF+++K +   P V TY ++I+G C   D+ 
Sbjct: 232 GQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFK 291

Query: 69  EAKRLFFEMMDQGV-----------------------------------QPSVVTFNVIM 93
              RL  EM  +G+                                   +P +VT+N ++
Sbjct: 292 AIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLI 351

Query: 94  DELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCK 153
              C++GK+ EA +LL+  + + + PN F+Y+ L+  +C  G  +RA      M   G K
Sbjct: 352 SGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHK 411

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            D V+Y  L++G     EV+ AL++  +M+ +G+ P    YN L  GL +  ++  A  L
Sbjct: 412 PDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLL 471

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
             EM    V  D   Y T +DG  +NG + EA +LF           I  YN +I G CK
Sbjct: 472 LAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCK 531

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
            G ++ A+     + +R L  D  TY+ +I G      +D A  +F +M +    PNV+ 
Sbjct: 532 FGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVT 591

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           + +LI+GF R     + +++  +M+   ++P+    S+++
Sbjct: 592 YTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILI 631



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 175/376 (46%), Gaps = 49/376 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  +Y  +I   CK+G  D+A    ++M      PD+VTY +L+HGL  A + + A  +
Sbjct: 377 PNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTI 436

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+++GV P    +N++M  LCK  K+  A  LL  M+ + V P+AF Y+TL+DGF  
Sbjct: 437 REKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIR 496

Query: 134 TGKINRAEELF-------------------------GSM-ESMGC------KH---DDVS 158
            G ++ A +LF                         G M ++M C      +H   D+ +
Sbjct: 497 NGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFT 556

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y+ +I+GY K  +++ A  ++REMV    KP VVTY +L  G      +  +LK+F EMQ
Sbjct: 557 YSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQ 616

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  +  TY+  I   CK   +++A   F  + + KC  +   +N L++G  K+G   
Sbjct: 617 ACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRA 676

Query: 279 IA--------------LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
           I+              L  F  +           YN ++  LC  G    A  L   M  
Sbjct: 677 ISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTS 736

Query: 325 NAVAPNVIIFVTLIHG 340
               P+ + FV L+HG
Sbjct: 737 KGCIPDSVSFVALLHG 752



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 165/312 (52%), Gaps = 14/312 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   YN ++ GLCK+  +  AK L  +M  +++ PD   Y +L+ G     + +EA++L
Sbjct: 447 PDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKL 506

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F   +++G+ P +V +N ++   CK G M +A   ++ M +R + P+ FTYST++DG+  
Sbjct: 507 FELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVK 566

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              ++ A+++F  M  M CK + V+Y  LING+C+  ++  +L ++REM + G+ P VVT
Sbjct: 567 QHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVT 626

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY--IVEA------ 245
           Y+ L     +  ++  A   FEEM  +    +  T+N  ++G  KNG   I E       
Sbjct: 627 YSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQE 686

Query: 246 ------VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
                 +  F  +          AYN ++  LC+ G    AL+L   +  +  + D V++
Sbjct: 687 NKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSF 746

Query: 300 NIMIHGLCNDGQ 311
             ++HG+C +G+
Sbjct: 747 VALLHGVCLEGR 758



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 179/367 (48%), Gaps = 5/367 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N   Y++++  L +     + + +   M+ E ++P     + +I     +    +A  L+
Sbjct: 93  NGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELY 152

Query: 75  FEMMDQGVQ-PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT--YST--LMD 129
           + ++      P V+  N +++ L K G+++ A +L D M++ D   +     YST  ++ 
Sbjct: 153 YFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVK 212

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C  GK+    +L       GC  + + YN LI+GYCK  ++E A  L+ E+  KG  P
Sbjct: 213 GLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLP 272

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           TV TY  +  G  +    +   +L  EM    +  +   YNT ID   K+G+IV+AVE  
Sbjct: 273 TVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETI 332

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +    C+ DI  YN LI G C+ G++  A +L      + L+ +  +Y  +IH  C  
Sbjct: 333 EGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQ 392

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G  D+A +  ++M E    P+++ +  L+HG V   +    + +  KM E+ V PDA I 
Sbjct: 393 GGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIY 452

Query: 370 SMVVDLL 376
           ++++  L
Sbjct: 453 NILMSGL 459



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 15/167 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEG----------FVDKAKALFLQMKGENIN----PDVVTYNSL 57
           C PN VT+N +++G  K G          F +  +++FL   G  I+    P    YNS+
Sbjct: 655 CVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSI 714

Query: 58  IHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV 117
           +  LC    +  A +L  +M  +G  P  V+F  ++  +C  G+  E   ++   +    
Sbjct: 715 LICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERE 774

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
              A  YS+++D +   G  + A  +  +M      H  V  NI ++
Sbjct: 775 LQIAVNYSSILDQYLPQG-TSEASVILQTMFEECQSHSKVGDNIQVS 820


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 203/397 (51%), Gaps = 35/397 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+   YN +I+G CK   +D A  +  +M+ ++ +PD VTYN +I  LC     + A +
Sbjct: 151 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 210

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +++    QP+V+T+ ++++     G +DEA +LLD M+ R ++P+ FTY+T++ G C
Sbjct: 211 VLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMC 270

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYN-------------------------------- 160
             G ++RA E+  ++E  GC+ D +SYN                                
Sbjct: 271 KEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 330

Query: 161 ---ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
              ILI   C++ ++EEA++L + M  KG+ P   +Y+ L        +++ A++  E M
Sbjct: 331 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 390

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
             D    D   YNT +  LCKNG   +A+E+F  LG + C  +  +YN +   L  SG  
Sbjct: 391 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 450

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             AL +   +    +  D +TYN MI  LC +G +DKA +L +DM      P+V+ +  +
Sbjct: 451 IRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIV 510

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + GF + ++    I++L  M      P+ +  +++++
Sbjct: 511 LLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIE 547



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 192/348 (55%), Gaps = 10/348 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TYNTII G+CKEG VD+A  +   ++ +   PDV++YN L+  L +   W E ++
Sbjct: 256 KPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 315

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M  +   P+VVT+++++  LC++GK++EA  LL LM ++ + P+A++Y  L+  FC
Sbjct: 316 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 375

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ A E   +M S GC  D V+YN ++   CKN + ++AL ++ ++   G  P   
Sbjct: 376 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 435

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNT+F  L+       AL +  EM  + +  D  TYN+ I  LC+ G + +A EL   +
Sbjct: 436 SYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDM 495

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +    +  YN ++ G CK+ R+E A+++  S+       +  TY ++I G+   G  
Sbjct: 496 RSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYR 555

Query: 313 DKAHDLFLDMEE-NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
            +A +L  D+   NA++          + F R+++   ++ +L +  +
Sbjct: 556 AEAMELANDLVRINAISE---------YSFKRLHRTFPLLNVLQRSSQ 594



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 170/346 (49%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P  +TY  +I+    EG VD+A  L  +M    + PD+ TYN++I G+C     + A 
Sbjct: 220 CQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 279

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   +  +G +P V+++N+++  L   GK +E  +L+  M      PN  TYS L+   
Sbjct: 280 EMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 339

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GKI  A  L   M+  G   D  SY+ LI  +C+   ++ A+     M+S G  P +
Sbjct: 340 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 399

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YNT+   L +  + + AL++F ++     + ++S+YNT    L  +G  + A+ +   
Sbjct: 400 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 459

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D   YN +I  LC+ G ++ A EL   +        VVTYNI++ G C   +
Sbjct: 460 MVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 519

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           ++ A D+   M  N   PN   +  LI G       ++ +EL + +
Sbjct: 520 IEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 565



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 176/341 (51%), Gaps = 1/341 (0%)

Query: 27  CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           C+ G   ++  L   M  +  NPDV+    LI G     +  +A R+  E++++  QP V
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQPDV 154

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
             +N +++  CK  ++D+A+R+LD M  +D  P+  TY+ ++   C  GK++ A ++   
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           + S  C+   ++Y ILI        V+EAL L  EM+S+G+KP + TYNT+  G+ +   
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           V+ A ++   ++      D  +YN  +  L   G   E  +L   +   KC+ ++  Y+ 
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LI  LC+ G++E A+ L + +  + L  D  +Y+ +I   C +G++D A +    M  + 
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             P+++ + T++    +  K  + +E+  K+ E    P++S
Sbjct: 395 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 435



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 145/308 (47%), Gaps = 34/308 (11%)

Query: 92  IMDELCKNGKMDEASRLLDLMVQR----DV------------------------------ 117
           I    C++G   E+  LL+ MV++    DV                              
Sbjct: 91  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG 150

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
           +P+ F Y+ L++GFC   +I+ A  +   M S     D V+YNI+I   C   +++ AL 
Sbjct: 151 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 210

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           +  +++S   +PTV+TY  L         V+ ALKL +EM    +  D  TYNT I G+C
Sbjct: 211 VLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMC 270

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           K G +  A E+ R L +  CE D+ +YN L+  L   G+ E   +L   +       +VV
Sbjct: 271 KEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 330

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           TY+I+I  LC DG++++A +L   M+E  + P+   +  LI  F R  +    IE L  M
Sbjct: 331 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 390

Query: 358 KEKKVMPD 365
                +PD
Sbjct: 391 ISDGCLPD 398



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 143/278 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ ++YN ++  L  +G  ++ + L  +M  E  +P+VVTY+ LI  LC      EA 
Sbjct: 290 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAM 349

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M ++G+ P   +++ ++   C+ G++D A   L+ M+     P+   Y+T++   
Sbjct: 350 NLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 409

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK ++A E+FG +  +GC  +  SYN + +    + +   AL +  EMVS GI P  
Sbjct: 410 CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDE 469

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYN++   L     V+ A +L  +M+  +      TYN  + G CK   I +A+++  +
Sbjct: 470 ITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDS 529

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           +    C  +   Y  LI+G+  +G    A+EL   L R
Sbjct: 530 MVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 567



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 122/245 (49%), Gaps = 1/245 (0%)

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +G    +  L  +M   G   D +    LI G+   + V +A+ +  E++ K  +P V
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQPDV 154

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             YN L  G  ++++++ A ++ + M+  D + DT TYN  I  LC  G +  A+++   
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L    C+  +  Y  LI+     G ++ AL+L   +  R L  D+ TYN +I G+C +G 
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A ++  ++E     P+VI +  L+   +   K  +  +L+ KM  +K  P+    S+
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 372 VVDLL 376
           ++  L
Sbjct: 335 LITTL 339



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 2/138 (1%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE+G  C PN+ +YNT+   L   G   +A  + L+M    I+PD +TYNS+I  LC   
Sbjct: 426 GEVG--CSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREG 483

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             ++A  L  +M      PSVVT+N+++   CK  ++++A  +LD MV    RPN  TY+
Sbjct: 484 MVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYT 543

Query: 126 TLMDGFCLTGKINRAEEL 143
            L++G    G    A EL
Sbjct: 544 VLIEGIGFAGYRAEAMEL 561


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 187/359 (52%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G+  KPN V+YNTII G    G ++ A+ +   M+ + I PD  TY SLI G+C      
Sbjct: 201 GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 260

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  LF +M++ G+ P+ VT+N ++D  C  G ++ A    D MV++ + P+  TY+ L+
Sbjct: 261 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 320

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
               + G++  A+++   M   G   D ++YNILINGY +    + A  L+ EM+SKGI+
Sbjct: 321 HALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIE 380

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           PT VTY +L   L   ++++ A  LFE++    V+ D   +N  IDG C NG +  A  L
Sbjct: 381 PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFML 440

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            + +       D   +N L+ G C+ G++E A  L   +  R +  D ++YN +I G   
Sbjct: 441 LKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGR 500

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            G +  A  +  +M      P ++ +  LI    +  +     ELL +M  K + PD S
Sbjct: 501 RGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDS 559



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 157/297 (52%)

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A+     M   G +P+VV++N I+      G ++ A R+LD M  + + P+++TY +L+
Sbjct: 191 KAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLI 250

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C  G++  A  LF  M  +G   + V+YN LI+GYC   ++E A S   EMV KGI 
Sbjct: 251 SGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIM 310

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P+V TYN L   LF   ++  A  + +EM++  +  D  TYN  I+G  + G    A +L
Sbjct: 311 PSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDL 370

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +     E     Y  LI  L +  R++ A +LF  +  + +  DV+ +N MI G C 
Sbjct: 371 HNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCA 430

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +G +++A  L  +M+  +V P+ + F TL+ G  R  K  +   LL +MK + + PD
Sbjct: 431 NGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPD 487



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/231 (37%), Positives = 133/231 (57%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TYN +I+G  + G   +A  L  +M  + I P  VTY SLI+ L   N   EA  L
Sbjct: 346 PDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDL 405

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +++DQGV P V+ FN ++D  C NG ++ A  LL  M ++ V P+  T++TLM G C 
Sbjct: 406 FEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCR 465

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A  L   M+  G K D +SYN LI+GY +  ++++A  +  EM+S G  PT++T
Sbjct: 466 EGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLT 525

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           YN L   L +  + + A +L +EM    ++ D STY + I+G+     +VE
Sbjct: 526 YNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 576



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 127/245 (51%), Gaps = 6/245 (2%)

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK+ +A E  G ME +G K + VSYN +I+GY     +E A  +   M  KGI+P   
Sbjct: 185 LEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 244

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY +L  G+ +  ++E A  LF++M    +  +  TYNT IDG C  G +  A      +
Sbjct: 245 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 304

Query: 253 ---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
              GI+     +  YN L+  L   GR+  A ++ + + ++ ++ D +TYNI+I+G    
Sbjct: 305 VKKGIMP---SVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRC 361

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G   +A DL  +M    + P  + + +LI+   R N+  +  +L  K+ ++ V PD  + 
Sbjct: 362 GNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMF 421

Query: 370 SMVVD 374
           + ++D
Sbjct: 422 NAMID 426



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 7/167 (4%)

Query: 212 KLFEEM--QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           +LF+E+   RD ++  +S     ++G  K     +A E    +  L  + ++ +YN +I 
Sbjct: 162 ELFDELTLSRDRLSVKSSIVFDLLEGKLK-----KAREFIGFMEGLGFKPNVVSYNTIIH 216

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           G    G +E A  +  ++  + +  D  TY  +I G+C +G++++A  LF  M E  + P
Sbjct: 217 GYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP 276

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           N + + TLI G+       +      +M +K +MP  S  +++V  L
Sbjct: 277 NAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 323


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 198/365 (54%), Gaps = 4/365 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N VTYN +I G+ K G + KA +LF +M    I PD  TYN LI G   ++D  +A  
Sbjct: 378 KLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACE 437

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  + + PS  T++V++  LC +  + +A+ +LD M++  V+PN F Y TL+  + 
Sbjct: 438 LLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYV 497

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +   A EL   M + G   D   YN LI G C+ K+VEEA  L  +M  KGIKP   
Sbjct: 498 QESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAH 557

Query: 193 TYNTLFLGLF-EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           TY   F+ L+ +  +++ A + F++M    +  +   Y   I G C  G  VEA+  F+ 
Sbjct: 558 TYGA-FINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKC 616

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       DI+AY+ +I  L K+G+ + A+ +F    +  +V DV  YN +I G C +G 
Sbjct: 617 MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGD 676

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLI--HGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           ++KA  L+ +M  N + PN++++ TLI  +G+ +    ++  +L  +M  K + PD  I 
Sbjct: 677 IEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIY 736

Query: 370 SMVVD 374
            +++D
Sbjct: 737 CILID 741



 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 186/368 (50%), Gaps = 6/368 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN  TYN  I GLC+ G VD+A  +   M  + + PD  TY  L+ G C      EAK
Sbjct: 272 CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAK 331

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M   G+ P+  T+  ++D   K G ++EA R+ D M+ R ++ N  TY+ ++ G 
Sbjct: 332 LIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGI 391

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G++ +A  LF  M   G + D  +YN+LI+GY K+ ++ +A  L  EM ++ + P+ 
Sbjct: 392 AKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSP 451

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY+ L  GL     ++ A ++ ++M R+ V  +   Y T I    +      A+EL + 
Sbjct: 452 FTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKI 511

Query: 252 L---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           +   G+L    D+  YNCLI GLC++ ++E A  L   +  + +  +  TY   I+    
Sbjct: 512 MIANGVLP---DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G++  A   F DM  + + PN +I+  LI G   +    + +     M EK ++PD   
Sbjct: 569 SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA 628

Query: 369 VSMVVDLL 376
            S ++  L
Sbjct: 629 YSAIIHSL 636



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 181/351 (51%), Gaps = 1/351 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N   ++  ID     GF+++A ++F+    E   P ++  N+L+  L  AN      +++
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M++  + P V T+  ++   CK G + +   +L  M +++ +PN FTY+  + G C T
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQT 289

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G ++ A E+   M   G   D  +Y +L++G+CK K  +EA  ++  M S G+ P   TY
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  G  +   +E AL++ +EM    +  +  TYN  I G+ K G + +A+ LF  + +
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              E D   YN LIDG  KS  +  A EL   +  R L     TY+++I GLC+   + K
Sbjct: 410 AGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQK 469

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           A+++   M  N V PNV ++ TLI  +V+ ++    IELL  M    V+PD
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD 520



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 185/364 (50%), Gaps = 6/364 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+T TYN +IDG  K   + KA  L  +MK   + P   TY+ LI GLCH++D  +A  
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M+  GV+P+V  +  ++    +  + + A  LL +M+   V P+ F Y+ L+ G C
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K+  A+ L   M   G K +  +Y   IN Y K+ E++ A   +++M+S GI P  V
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y  L  G  ++     AL  F+ M    +  D   Y+  I  L KNG   EA+ +F  L
Sbjct: 593 IYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF--L 650

Query: 253 GILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI--HGLCN 308
             LK  +  D+  YN LI G CK G +E A +L+  +    +  ++V YN +I  +G C 
Sbjct: 651 KFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCK 710

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G + +A  LF +M    ++P+  I+  LI G  +     K + L H+ ++K V   ++ 
Sbjct: 711 SGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAF 770

Query: 369 VSMV 372
            S++
Sbjct: 771 NSLI 774



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 179/355 (50%), Gaps = 3/355 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   YN +I GLC+   V++AK L + M  + I P+  TY + I+    + +   A+R 
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+  G+ P+ V + +++   C  G   EA      M+++ + P+   YS ++     
Sbjct: 579 FKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSK 638

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK   A  +F      G   D   YN LI+G+CK  ++E+A  LY EM+  GI P +V 
Sbjct: 639 NGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVV 698

Query: 194 YNTLF--LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           YNTL    G  +   +  A KLF+EM    ++ D   Y   IDG  K G + +A+ LF  
Sbjct: 699 YNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHE 758

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
               K    + A+N LID  CK G++  A ELF  +  + L  ++VTY I+I        
Sbjct: 759 -AQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEM 817

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           M++A  LFLDME   + PN + + +L+  + +I    K+I L   M+ + +  DA
Sbjct: 818 MEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDA 872



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/353 (33%), Positives = 180/353 (50%), Gaps = 5/353 (1%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE G+  KPN  TY   I+   K G +  A+  F  M    I P+ V Y  LI G C   
Sbjct: 548 GEKGI--KPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVG 605

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
           +  EA   F  M+++G+ P +  ++ I+  L KNGK  EA  +    ++  V P+ F Y+
Sbjct: 606 NTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYN 665

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILIN--GYCKNKEVEEALSLYREMV 183
           +L+ GFC  G I +A +L+  M   G   + V YN LIN  GYCK+  + EA  L+ EM+
Sbjct: 666 SLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMI 725

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
           SKGI P    Y  L  G  +   +E AL LF E Q+  V +  S +N+ ID  CK+G ++
Sbjct: 726 SKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGS-LSAFNSLIDSFCKHGKVI 784

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           EA ELF  +   K   +I  Y  LID   K+  +E A +LF  +  R ++ + +TY  ++
Sbjct: 785 EARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLL 844

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
                 G   K   LF DME   +A + I +  +   + +  K  + ++LL+K
Sbjct: 845 LSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNK 897



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 185/364 (50%), Gaps = 6/364 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY  +IDG  KEG +++A  +  +M    +  +VVTYN++I G+  A +  +A  L
Sbjct: 344 PNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSL 403

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+  G++P   T+N+++D   K+  M +A  LL  M  R + P+ FTYS L+ G C 
Sbjct: 404 FNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCH 463

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +  + +A E+   M   G K +   Y  LI  Y +    E A+ L + M++ G+ P +  
Sbjct: 464 SSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFC 523

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           YN L +GL    +VE A  L  +M    +  +  TY  FI+   K+G I  A   F+ + 
Sbjct: 524 YNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDML 583

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             GI+   +    Y  LI G C  G    AL  F+ +  + L+ D+  Y+ +IH L  +G
Sbjct: 584 SSGIVPNNV---IYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNG 640

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +  +A  +FL   +  V P+V ++ +LI GF +     K  +L  +M    + P+  + +
Sbjct: 641 KTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYN 700

Query: 371 MVVD 374
            +++
Sbjct: 701 TLIN 704



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 182/362 (50%), Gaps = 1/362 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  +  N ++  L K   +     ++  M    I PDV TY ++I   C   D  + K +
Sbjct: 205 PTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMV 264

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM ++  +P++ T+N  +  LC+ G +DEA  +  LM+++ + P+  TY+ L+DGFC 
Sbjct: 265 LSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCK 323

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +   A+ +F SM S G   +  +Y  LI+G+ K   +EEAL +  EM+++G+K  VVT
Sbjct: 324 QKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVT 383

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  G+ +  ++  A+ LF EM    +  DT TYN  IDG  K+  + +A EL   + 
Sbjct: 384 YNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMK 443

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K       Y+ LI GLC S  L+ A E+   + R  +  +V  Y  +I     + + +
Sbjct: 444 ARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYE 503

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A +L   M  N V P++  +  LI G  R  K  +   LL  M EK + P+A      +
Sbjct: 504 MAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFI 563

Query: 374 DL 375
           +L
Sbjct: 564 NL 565



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 168/328 (51%), Gaps = 5/328 (1%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLI--HGLCHA 64
           + GVV  P+   YN++I G CKEG ++KA  L+ +M    INP++V YN+LI  +G C +
Sbjct: 654 KTGVV--PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKS 711

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
            +  EA +LF EM+ +G+ P    + +++D   K G +++A  L     Q+ V   +  +
Sbjct: 712 GNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS-AF 770

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           ++L+D FC  GK+  A ELF  M       + V+Y ILI+ Y K + +EEA  L+ +M +
Sbjct: 771 NSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMET 830

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           + I P  +TY +L L   +I      + LF++M+   +A D   Y       CK G  +E
Sbjct: 831 RNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLE 890

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A++L     +   +L+   ++ LI  LCK  ++   LEL   + +  L     T N ++ 
Sbjct: 891 ALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLL 950

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           G    G  D+A  +   M+     P  +
Sbjct: 951 GFYKSGNEDEASKVLGVMQRLGWVPTSL 978



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 183/358 (51%), Gaps = 9/358 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   Y+ II  L K G   +A  +FL+     + PDV  YNSLI G C   D  +A +L
Sbjct: 624 PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQL 683

Query: 74  FFEMMDQGVQPSVVTFNVIMDEL--CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           + EM+  G+ P++V +N ++++   CK+G + EA +L D M+ + + P+ + Y  L+DG 
Sbjct: 684 YDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGC 743

Query: 132 CLTGKINRAEELF--GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
              G + +A  LF     +S+G      ++N LI+ +CK+ +V EA  L+ +MV K + P
Sbjct: 744 GKEGNLEKALSLFHEAQQKSVGSLS---AFNSLIDSFCKHGKVIEARELFDDMVDKKLTP 800

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            +VTY  L     +   +E A +LF +M+  ++  +T TY + +    + G   + + LF
Sbjct: 801 NIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLF 860

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF-RSLPRRVLVADVVTYNIMIHGLCN 308
           + +       D  AY  +    CK G+   AL+L  +SL   + + D V ++ +I  LC 
Sbjct: 861 KDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDV-FDALIFHLCK 919

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           + Q+    +L  +M +  ++ +     TL+ GF +     +  ++L  M+    +P +
Sbjct: 920 EKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTS 977


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/362 (33%), Positives = 182/362 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N VTYN +I GLC+ G V++A     +M    ++PD  TY +L++GLC      EAK
Sbjct: 276 CAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAK 335

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM   G++P+VV +  ++D   K GK  EA  +L+ M+   V+PN   Y  L+ G 
Sbjct: 336 ALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGL 395

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++ RA +L   M  +G + D  +Y+ L+ G+ ++ + + A  L  EM + GI P  
Sbjct: 396 CKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNA 455

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY  +  GL +  + + A  L EEM  + +  +   Y   I G  K G+I  A E    
Sbjct: 456 YTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLEN 515

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D+  YN LI GL   GR+E A E +  + +R LV D  TY+ +IHG C    
Sbjct: 516 MTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRN 575

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           ++KA  L   M  + + PN   +  L+ G+ + N   KV  +L  M      PD  I  +
Sbjct: 576 LEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGI 635

Query: 372 VV 373
           V+
Sbjct: 636 VI 637



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 211/473 (44%), Gaps = 104/473 (21%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N  I    +PN + Y+ +I GLCK G + +A  L  +M      PD  TY+ L+ G    
Sbjct: 374 NEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQH 433

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
            D + A  L  EM + G+ P+  T+ ++++ LC+NG+  EA  LL+ M+   ++PNAF Y
Sbjct: 434 YDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMY 493

Query: 125 STLMDG--------------------------FCLT---------GKINRAEELFGSMES 149
           + L+ G                          FC           G+I  AEE +  ++ 
Sbjct: 494 APLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQK 553

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH---- 205
            G   D+ +Y+ LI+GYCK + +E+A  L ++M++ G+KP   TY  L  G F+ +    
Sbjct: 554 RGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEK 613

Query: 206 -------------------------------QVEHALKLFEEMQRDDVAADTSTYNTFID 234
                                           +E A  +  E++++ +  D   Y++ I 
Sbjct: 614 VSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLIS 673

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
           GLCK   + +AV L   +     E  I  YN LIDG C+SG +  A  +F S+  + L+ 
Sbjct: 674 GLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLP 733

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN------------------------ 330
           + VTY  +I G C +G +  A DL+ DM +  +AP+                        
Sbjct: 734 NCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLT 793

Query: 331 ----------VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
                     V +F TL+ GF +  +  +  +LLH M +++++P+A  V  V+
Sbjct: 794 EEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVI 846



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 161/353 (45%), Gaps = 6/353 (1%)

Query: 16  TVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFF 75
           T   + ++D   K G V  A  + L M    + P     N L+  L  A+      +L  
Sbjct: 175 TAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKG 234

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
            M   G+ P V T++  ++  CK    D A ++ + M +RD   N  TY+ ++ G C +G
Sbjct: 235 FMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 294

Query: 136 KINRAEELFGSMESM---GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +   EE FG  E M   G   D  +Y  L+NG CK   ++EA +L  EM   G+KP VV
Sbjct: 295 AV---EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVV 351

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y TL  G  +  +   A  +  EM    V  +   Y+  I GLCK G +  A +L   +
Sbjct: 352 VYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEM 411

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +    D   Y+ L+ G  +    + A EL   +    ++ +  TY IMI+GLC +G+ 
Sbjct: 412 IKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGES 471

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +A +L  +M    + PN  ++  LI G  +    S   E L  M +  V+PD
Sbjct: 472 KEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPD 524



 Score =  154 bits (388), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 174/384 (45%), Gaps = 34/384 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN   Y  +I G  KEG +  A      M   N+ PD+  YNSLI GL       EA+ 
Sbjct: 487 KPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEE 546

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            + ++  +G+ P   T++ ++   CK   +++A +LL  M+   ++PNA TY+ L++G+ 
Sbjct: 547 YYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYF 606

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +    +   +  SM   G K D+  Y I+I    +++ +E A  +  E+   G+ P + 
Sbjct: 607 KSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLH 666

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y++L  GL ++  +E A+ L +EM ++ +      YN  IDG C++G I  A  +F ++
Sbjct: 667 IYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI 726

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM---------- 302
                  +   Y  LIDG CK+G +  A +L++ +  R +  D   YN++          
Sbjct: 727 LAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADL 786

Query: 303 ------------------------IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
                                   + G C  G++ +   L   M +  + PN      +I
Sbjct: 787 EQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVI 846

Query: 339 HGFVRINKPSKVIELLHKMKEKKV 362
             F +  K  +   +  ++++KK 
Sbjct: 847 TEFGKAGKLCEAHRVFAELQQKKA 870



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 150/353 (42%), Gaps = 25/353 (7%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVV--------------------- 87
           P    +  L   LC A+ + +A  L  +M+     P +V                     
Sbjct: 113 PSADAFARLAASLCAASHFPQANGLLHQMILAHPHPPLVLASIQRAIQDSDARSPSPSPS 172

Query: 88  ----TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEEL 143
                 +V++D   KNG +  A++++ +M    + P     + L+        +    +L
Sbjct: 173 HSTAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKL 232

Query: 144 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 203
            G ME  G   D  +Y+  +  +CK ++ + A  ++ EM  +      VTYN +  GL  
Sbjct: 233 KGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 292

Query: 204 IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQA 263
              VE A    EEM    ++ D  TY   ++GLCK G + EA  L   +     + ++  
Sbjct: 293 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVV 352

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
           Y  L+DG  K G+   A ++   +    +  + + Y+ +I GLC  GQ+ +A  L  +M 
Sbjct: 353 YATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMI 412

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +    P+   +  L+ G  +        ELL++M+   ++P+A    ++++ L
Sbjct: 413 KVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGL 465


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 110/333 (33%), Positives = 188/333 (56%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+I+    +G V KA+ ++ QM    I+P+V+TY S+I  LC      +A+RL
Sbjct: 176 PSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERL 235

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M + G++P+  T+NV+M   C+   ++ A  L   ++   + PNA  ++TL+DGFC 
Sbjct: 236 FDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCK 295

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             + + A+++F  M   G       YN L++G  ++ + +EALSLY+EM   G+ P   T
Sbjct: 296 AKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFT 355

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            + +  GL +  Q++ A +  E ++ D V  + + YN  ID  C+NG + EA+     + 
Sbjct: 356 CSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMT 415

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  E ++ +Y+ LIDG  K G+++IA+ ++  +  + +  +VVTY  +IHG   +G +D
Sbjct: 416 EVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGID 475

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
            A     +M EN ++PN I    L+ G  R N+
Sbjct: 476 AAFRFHKEMIENGISPNAITVSVLVDGLCRENR 508



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 185/363 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P     N ++DGL K      A  LF +M    + P VVTYN+LI+   +     +A+ +
Sbjct: 141 PALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEM 200

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +M+ + + P+V+T+  ++  LC+ G + +A RL D M +  +RPN +TY+ LM G C 
Sbjct: 201 WDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQ 260

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +N A  L+  + + G   + V +  LI+G+CK K   EA  ++R+M   G+ PTV  
Sbjct: 261 GDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPV 320

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L  G F     + AL L++EM R  +  D  T +  + GLC  G I  A      + 
Sbjct: 321 YNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVR 380

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                L+  AYN LID  C++G LE AL     +    +  +VV+Y+ +I G    G+M 
Sbjct: 381 EDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQ 440

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  ++ +M    + PNV+ +  LIHG  +            +M E  + P+A  VS++V
Sbjct: 441 IAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLV 500

Query: 374 DLL 376
           D L
Sbjct: 501 DGL 503



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 176/358 (49%), Gaps = 20/358 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V + T+IDG CK     +AK +F  M    + P V  YNSL+ G   + D  EA  L
Sbjct: 281 PNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSL 340

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + EM   G+ P   T ++++  LC  G++  A+R L+ + +  V  NA  Y+ L+D +C 
Sbjct: 341 YQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCR 400

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A      M  +G + + VSY+ LI+G+ K  +++ A+++Y EMV+KGI+P VVT
Sbjct: 401 NGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVT 460

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G  +   ++ A +  +EM  + ++ +  T +  +DGLC+   + +AV       
Sbjct: 461 YTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHS 520

Query: 254 ILKCELDIQA------------------YNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
            +K   DI +                  Y  LI GL   G+   A +LF  + +  +++D
Sbjct: 521 GIKYS-DIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISD 579

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP-NVIIFVTLIHGFVRINKPSKVIE 352
             TY ++I G C  G +  A  L+ DM +  V P    I    I  +  +N P  V+ 
Sbjct: 580 SFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPMRYKIICPEIWSWEPLNDPQTVVS 637



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 169/348 (48%), Gaps = 23/348 (6%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TYN ++ G C+   V+ A  L+ ++    + P+ V + +LI G C A  ++EAK 
Sbjct: 245 RPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKD 304

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +M   GV P+V  +N +MD   ++G   EA  L   M +  + P+ FT S ++ G C
Sbjct: 305 MFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLC 364

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+I  A      +   G   +  +YN LI+ YC+N  +EEAL+    M   G++P VV
Sbjct: 365 DGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVV 424

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y++L  G  ++ +++ A+ ++ EM    +  +  TY   I G  KNG I  A    + +
Sbjct: 425 SYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEM 484

Query: 253 ---GILKCELDIQAYNCLIDGLCKSGRLEIALELFR-----------------SLPRRVL 292
              GI    + +   + L+DGLC+  R++ A+                     +     L
Sbjct: 485 IENGISPNAITV---SVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPL 541

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           + +   Y  +I+GL  DGQ  +A  LF  M ++ +  +   +  LI G
Sbjct: 542 IPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRG 589



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 19/200 (9%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+GV  +PN V+Y+++IDG  K G +  A A++ +M  + I P+VVTY +LIHG      
Sbjct: 416 EVGV--EPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGG 473

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL---------DLMV---- 113
            + A R   EM++ G+ P+ +T +V++D LC+  ++ +A R +         D+      
Sbjct: 474 IDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSN 533

Query: 114 ----QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
               +  + PN+  Y TL+ G  L G+   A +LF  M   G   D  +Y +LI G C  
Sbjct: 534 FTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCML 593

Query: 170 KEVEEALSLYREMVSKGIKP 189
             V  A+ LY +M+  G+KP
Sbjct: 594 GYVLNAMMLYADMMKIGVKP 613


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 198/363 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN +I GLCK+G +D+A  L  +M+   + PDVVTYN+LI+G    +   +   L
Sbjct: 315 PDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFEL 374

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M  +GV+P+ VT+NV++    K GKMD A   L  M +    P+  T++TL++G+C 
Sbjct: 375 IDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCK 434

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A  +   M   G K + V+ N +++  C  +++++A  L      +G     V+
Sbjct: 435 AGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVS 494

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL +G F+  +   A+KL++EM+  ++     TYNT I GLC +G   ++++    L 
Sbjct: 495 YGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELL 554

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D   YN +I G C+ G++E A +    + ++    D+ T NI++ GLC +G +D
Sbjct: 555 ESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLD 614

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA  LF        A + + + T+I G  + ++  +  +LL +M+EKK+ PD    + ++
Sbjct: 615 KALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAIL 674

Query: 374 DLL 376
             L
Sbjct: 675 SAL 677



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 114/361 (31%), Positives = 195/361 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K NT T+N +I G C E  + +A  L  +MK  +  PD V+YN+++  LC     NEA+ 
Sbjct: 209 KVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARD 268

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M + G+ P+  TFN+++   CK G + EA++++DLM Q +V P+ +TY+ L+ G C
Sbjct: 269 LLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLC 328

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GKI+ A  L   ME++    D V+YN LING        +   L  +M  KG+KP  V
Sbjct: 329 KDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAV 388

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN +     +  ++++A     +M+    + D  T+NT I+G CK G + EA  +   +
Sbjct: 389 TYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEM 448

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +++    N ++  LC   +L+ A +L  S  +R    D V+Y  +I G   DG+ 
Sbjct: 449 SRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKS 508

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  L+ +M+E  + P++I + T+I G     K  + I+ L+++ E  ++PD +  + +
Sbjct: 509 VEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTI 568

Query: 373 V 373
           +
Sbjct: 569 I 569



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 114/355 (32%), Positives = 184/355 (51%), Gaps = 3/355 (0%)

Query: 13  KPNTVTYNTIIDGLCK---EGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           KPN +T NT+I+ L +   +  V  +KA+F  +    +  +  T+N LI+G C  N  +E
Sbjct: 171 KPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSE 230

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  L  +M D    P  V++N I+D LCK GK++EA  LL  M    + PN  T++ L+ 
Sbjct: 231 AIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVS 290

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+C  G +  A ++   M       D  +YN+LI G CK+ +++EA  L  EM +  + P
Sbjct: 291 GYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLP 350

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VVTYNTL  G F+        +L ++M+   V  +  TYN  +    K G +  A    
Sbjct: 351 DVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNEL 410

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           R +       D   +N LI+G CK+GRL  A  +   + R+ L  + VT N ++H LC +
Sbjct: 411 RKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGE 470

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            ++D A+ L     +     + + + TLI G+ +  K  + ++L  +MKEK+++P
Sbjct: 471 RKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIP 525



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 161/310 (51%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G   KPN VTYN ++    KEG +D A     +M+    +PD VT+N+LI+G C A   +
Sbjct: 380 GKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLS 439

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA R+  EM  +G++ + VT N I+  LC   K+D+A +LL    +R    +  +Y TL+
Sbjct: 440 EAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLI 499

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G+   GK   A +L+  M+        ++YN +I G C + + ++++    E++  G+ 
Sbjct: 500 MGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLV 559

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P   TYNT+ LG     QVE A +   +M +     D  T N  + GLC  G + +A++L
Sbjct: 560 PDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKL 619

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F T       +D   YN +I GLCK  R E A +L   +  + L  D  TYN ++  L +
Sbjct: 620 FNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALAD 679

Query: 309 DGQMDKAHDL 318
            G+M +A + 
Sbjct: 680 AGRMKEAEEF 689



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 167/328 (50%), Gaps = 3/328 (0%)

Query: 52  VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDE---ASRL 108
           V  ++ I      N  + A ++F  M    ++P+++T N +++ L +         +  +
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAI 199

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
              +++  V+ N  T++ L+ G C+  K++ A  L G M+   C  D+VSYN +++  CK
Sbjct: 200 FSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCK 259

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             ++ EA  L  +M + G+ P   T+N L  G  ++  ++ A ++ + M +++V  D  T
Sbjct: 260 KGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWT 319

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           YN  I GLCK+G I EA  L   +  LK   D+  YN LI+G           EL   + 
Sbjct: 320 YNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKME 379

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
            + +  + VTYN+++     +G+MD A +    MEE+  +P+ + F TLI+G+ +  + S
Sbjct: 380 GKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLS 439

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +   ++ +M  K +  ++  ++ ++  L
Sbjct: 440 EAFRMMDEMSRKGLKMNSVTLNTILHTL 467



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 12/191 (6%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  T N ++ GLC EG +DKA  LF     +    D VTYN++I GLC  + + EA  
Sbjct: 594 KPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFD 653

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM ++ + P   T+N I+  L   G+M EA   +  +V++           L D   
Sbjct: 654 LLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQ---------GKLQDQ-- 702

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            T  +N+ +    S  S     + V+++  IN  C   + ++A+ + +E   KGI     
Sbjct: 703 -TISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKS 761

Query: 193 TYNTLFLGLFE 203
           TY +L  GL +
Sbjct: 762 TYISLMEGLIK 772


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/425 (31%), Positives = 205/425 (48%), Gaps = 62/425 (14%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V YNT+I   CKEG  D A+ L  +M+ + ++PDVVT+N+ I  LC +    EA R+
Sbjct: 124 PNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRI 183

Query: 74  FFEMMDQGV----QPSVVTFNVIMDELCKNGKMDEASRL--------------------- 108
           F +M    V    QP+++T+N+++   CK G ++EA  L                     
Sbjct: 184 FRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLL 243

Query: 109 --------------LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
                         L  MV   + PN ++Y+ +MDG C  G +  A  L   M S G   
Sbjct: 244 GLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLP 303

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D V+Y  L++GYC   +V EA ++ REM+  G  P   T N L   L++  ++  A +L 
Sbjct: 304 DTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELL 363

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR--------TLGIL----------- 255
           ++M       DT T N  IDGLC NG + +A+E+           LG L           
Sbjct: 364 QKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDS 423

Query: 256 ----KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
               KC  D+ +Y+ +I GLCK+GR+  A + F  +  + L  D   Y++ IH  C +G+
Sbjct: 424 DSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGK 483

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +  A  +  DME+      +  + +LI G    N+  ++  L+ +M+E+ V PD SI + 
Sbjct: 484 ISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNN 543

Query: 372 VVDLL 376
           V+  L
Sbjct: 544 VLSSL 548



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 190/411 (46%), Gaps = 62/411 (15%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN  ++  ++ G C+ GF  K   L  +M+    +P+ V YN+LI   C     ++A+
Sbjct: 87  CEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAE 146

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV----RPNAFTYSTL 127
           +L  EM   G+ P VVTFN  +  LC +GK+ EASR+   M   +V    +PN  TY+ +
Sbjct: 147 KLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLM 206

Query: 128 MDGFCLTGKINRAEELFGSME-----------------------------------SMGC 152
           + GFC  G +  A  LF  M+                                    MG 
Sbjct: 207 LGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGM 266

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
           + +  SYNI+++G CKN  + +A  L R M S G+ P  VTY TL  G     +V  A  
Sbjct: 267 EPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANN 326

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           +  EM RD  + +  T N  +  L K G I EA EL + +      +D    N +IDGLC
Sbjct: 327 VLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLC 386

Query: 273 KSGRLEIALELFRSL-----------------------PRRVLVADVVTYNIMIHGLCND 309
            +G+L+ A+E+   +                        R+  + D+++Y+ +I GLC  
Sbjct: 387 NNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKA 446

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           G++ +A   F++M    + P+  I+   IH F +  K S    +L  M++K
Sbjct: 447 GRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKK 497



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 195/367 (53%), Gaps = 4/367 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   YN ++    KEG VD    L   M    ++P+  T+N LI  LC +   ++A+ L
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M ++G +P+  +F +++   C+ G   +   LL  M +    PN   Y+TL+  FC 
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI----KP 189
            GK + AE+L   M   G   D V++N  I+  C + +V EA  ++R+M    +    +P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            ++TYN +  G  +   +E A  LFE+M+  +   +  +YN ++ GL + G ++EA  + 
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + +  +  E ++ +YN ++DGLCK+G L  A  L R +    ++ D VTY  ++HG C+ 
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++ +A+++  +M  +  +PN      L++   +  + S+  ELL KM EK  + D    
Sbjct: 319 GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTC 378

Query: 370 SMVVDLL 376
           ++V+D L
Sbjct: 379 NIVIDGL 385



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 189/401 (47%), Gaps = 58/401 (14%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +TYN ++ G CKEG +++A+ALF +MK      +  +YN  + GL       EA+ 
Sbjct: 197 QPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQL 256

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM+D G++P+V ++N++MD LCKNG + +A  L+ LM    V P+  TY+TL+ G+C
Sbjct: 257 VLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYC 316

Query: 133 LTGK-----------------------------------INRAEELFGSMESMGCKHDDV 157
            TGK                                   I+ AEEL   M   G   D V
Sbjct: 317 HTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTV 376

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIK-----------------------PTVVTY 194
           + NI+I+G C N ++++A+ +   M + G                         P +++Y
Sbjct: 377 TCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISY 436

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           +T+  GL +  +V  A K F EM   ++  D++ Y+ FI   CK G I  A  + + +  
Sbjct: 437 STIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEK 496

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C   +Q YN LI GL    ++     L   +  R +  DV  YN ++  LC  G++  
Sbjct: 497 KGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKD 556

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           A  +  +M +  ++PN+  F  LI  F +    S V E+  
Sbjct: 557 APSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFE 597



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 184/422 (43%), Gaps = 59/422 (13%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  +YN ++DGLCK G +  A+ L   M    + PD VTY +L+HG CH    +EA  
Sbjct: 267 EPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANN 326

Query: 73  LFFEMMDQGVQPS-----------------------------------VVTFNVIMDELC 97
           +  EMM  G  P+                                    VT N+++D LC
Sbjct: 327 VLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLC 386

Query: 98  KNGKMDEASRLLDLM-----------------------VQRDVRPNAFTYSTLMDGFCLT 134
            NGK+D+A  +++ M                        ++   P+  +YST++ G C  
Sbjct: 387 NNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKA 446

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G++  A++ F  M     + D   Y++ I+ +CK  ++  A  + ++M  KG   T+ TY
Sbjct: 447 GRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTY 506

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N+L +GL   +Q+     L +EM+   V+ D S YN  +  LC+ G + +A  +   +  
Sbjct: 507 NSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQ 566

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                +I +++ LI   CK+       E+F  +   V       Y++  + L   G++ K
Sbjct: 567 KGISPNISSFSILIKAFCKACDFSAVDEIFE-IALNVCGHKEALYSLTFNELLVGGEVVK 625

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A +LF    + +      ++  LI    +  K      +LHK+ +K    D +    V+D
Sbjct: 626 AKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVID 685

Query: 375 LL 376
            L
Sbjct: 686 GL 687



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 134/291 (46%), Gaps = 15/291 (5%)

Query: 4   GNGEIGVV--------CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYN 55
           GN  IG+V        C P+ ++Y+TII GLCK G V +AK  F++M G+N+ PD   Y+
Sbjct: 413 GNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYD 472

Query: 56  SLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
             IH  C     + A R+  +M  +G   ++ T+N ++  L    ++ E   L+D M +R
Sbjct: 473 VFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRER 532

Query: 116 DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN---KEV 172
            V P+   Y+ ++   C  G++  A  +   M   G   +  S++ILI  +CK      V
Sbjct: 533 GVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAV 592

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           +E   +   +         +T+N L +G     +V  A +LFE             Y   
Sbjct: 593 DEIFEIALNVCGHKEALYSLTFNELLVG----GEVVKAKELFETALDRSFDVGNFLYKDL 648

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL 283
           ID LCK+  + +A  +   L       D  ++  +IDGL K G    A EL
Sbjct: 649 IDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADEL 699



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 37/212 (17%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C     TYN++I GL  +  + +   L  +M+   ++PDV  YN+++  LC      +A 
Sbjct: 499 CNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAP 558

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCK--------------------------------- 98
            +  EM+ +G+ P++ +F++++   CK                                 
Sbjct: 559 SVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELL 618

Query: 99  -NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
             G++ +A  L +  + R      F Y  L+D  C   K++ A  +   +   G   D  
Sbjct: 619 VGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPA 678

Query: 158 SYNILINGYCKNKEVEEALSLYR---EMVSKG 186
           S+  +I+G  K     EA  L     EM S+G
Sbjct: 679 SFMPVIDGLGKRGNKHEADELAEKMMEMASEG 710



 Score = 39.3 bits (90), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 45/104 (43%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC      Y+   + L   G V KAK LF      + +     Y  LI  LC     ++A
Sbjct: 602 VCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDA 661

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
             +  +++D+G      +F  ++D L K G   EA  L + M++
Sbjct: 662 SGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMME 705


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 188/364 (51%), Gaps = 4/364 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN+VTY+T+I+GLC EG + +A  +  +M  + I P V TY   I  LC     ++A 
Sbjct: 263 CNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAI 322

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M  +G  PSV T+  I+  L + GKM+ A  +   M++  + PN  TY+ L++  
Sbjct: 323 NLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINEL 382

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+   A ++F  ME  G   +  +YN +I G     ++E+A+ ++ +M+  G  PTV
Sbjct: 383 CTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTV 442

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL +   +   + +A +    M+  +   D  TY   I G CK G +  A   F  
Sbjct: 443 VTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYE 502

Query: 252 LGILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           +  LKC +  +   Y  +IDG CK G++++AL LF  +      A + TYN +I GL   
Sbjct: 503 M--LKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKG 560

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            +  +A      M E  + PN I + +LI+G  +    +   ++ H+M++K  +P+A   
Sbjct: 561 NRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTY 620

Query: 370 SMVV 373
           + ++
Sbjct: 621 TSLI 624



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 188/363 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY ++I G C+   +DKA  +F +M  +  NP+ VTY++LI+GLC+     EA  +
Sbjct: 230 PDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDM 289

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM ++G++P+V T+ V +  LC  G++D+A  L+  M ++   P+  TY+ ++ G   
Sbjct: 290 LEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFR 349

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A  ++  M   G   + V+YN LIN  C       AL ++  M   G      T
Sbjct: 350 AGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQT 409

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GLF +  +E A+ +F +M +D  +    TYNT I    K GY+  A      + 
Sbjct: 410 YNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMK 469

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              CE D + Y  LI G CK G+L+ A   F  + +  +  +  TY  MI G C +G++D
Sbjct: 470 ESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKID 529

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  LF  MEEN  + ++  +  +I G  + N+ S+  +   KM E+ + P+    + ++
Sbjct: 530 VALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLI 589

Query: 374 DLL 376
           + L
Sbjct: 590 NGL 592



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 188/360 (52%), Gaps = 4/360 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNTVTYN +I+ LC EG    A  +F  M+G     +  TYN +I GL   +D  +A  +
Sbjct: 370 PNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVV 429

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+  G  P+VVT+N ++ E  K G ++ A+R L +M + +  P+  TY  L+ GFC 
Sbjct: 430 FNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCK 489

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A   F  M   G   +  +Y  +I+GYCK  +++ ALSL+  M   G   ++ T
Sbjct: 490 GGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIET 549

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GL + ++   A K   +M    +  +T TY + I+GLCKN     A ++F  + 
Sbjct: 550 YNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEME 609

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  +   Y  LI GLC+ G+++ A      L        + TY+ ++ GLC +G+ +
Sbjct: 610 KKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSN 665

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  L  +M+E  ++P++ I+ +L+    +  K    +E+ + M  K   P   I  +++
Sbjct: 666 EASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLI 725



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 171/348 (49%), Gaps = 4/348 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+  TY  +I G CK G +D A + F +M    I+P+  TY ++I G C     + A 
Sbjct: 473 CEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVAL 532

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M + G   S+ T+N I+  L K  +  EA +    M ++ ++PN  TY++L++G 
Sbjct: 533 SLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGL 592

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C     N A ++F  ME   C  +  +Y  LI G C+  +V+ A      +   G +PT+
Sbjct: 593 CKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTI 648

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY+TL  GL    +   A +L E M+   ++     Y + +   CK+  +  A+E+F  
Sbjct: 649 DTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNL 708

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +   +  +  Y  LI  LC   R E AL +F+SL ++   +D++ + +++ GL  +G 
Sbjct: 709 MAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGD 768

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
            D        ME     P++  ++ L     ++ K     ++ ++++E
Sbjct: 769 SDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGNRLRE 816



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 179/357 (50%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++NT++  L K   V  A+ ++ Q+    + P ++T+N++I+ LC      EA  +F ++
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
               + P   T+  ++   C+N K+D+A  + D MV+    PN+ TYSTL++G C  G+I
Sbjct: 224 FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRI 283

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A ++   M   G +    +Y + I+  C    V++A++L R M  KG  P+V TY  +
Sbjct: 284 GEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAI 343

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GLF   ++E A+ ++ +M ++ +  +T TYN  I+ LC  G    A+++F  +     
Sbjct: 344 ISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGT 403

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             + Q YN +I GL     +E A+ +F  + +      VVTYN +I      G ++ A  
Sbjct: 404 LANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATR 463

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
               M+E+   P+   +  LI GF +  K        ++M +  + P+    + ++D
Sbjct: 464 FLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMID 520



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 148/286 (51%), Gaps = 2/286 (0%)

Query: 85  SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELF 144
           ++ +FN ++ +L K   +  A  +   +    V+P+  T++T+++  C  GK+  A  +F
Sbjct: 161 TLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVF 220

Query: 145 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 204
             +       D  +Y  LI G+C+N+++++A  ++  MV  G  P  VTY+TL  GL   
Sbjct: 221 NKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNE 280

Query: 205 HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
            ++  A+ + EEM    +     TY   I  LC  G + +A+ L R++G   C   +Q Y
Sbjct: 281 GRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTY 340

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
             +I GL ++G++E+A+ ++  + +  LV + VTYN +I+ LC +G+   A  +F  ME 
Sbjct: 341 TAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEG 400

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +    N   +  +I G   ++   K + + +KM   K  P  ++V+
Sbjct: 401 HGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKM--LKDGPSPTVVT 444



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 119/219 (54%)

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           S+N L+    K   V  A ++Y ++ S G+KP+++T+NT+   L +  +V+ A+ +F ++
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
            + D+  D  TY + I G C+N  + +A E+F  +    C  +   Y+ LI+GLC  GR+
Sbjct: 224 FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRI 283

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A+++   +  + +   V TY + I  LC+ G++D A +L   M +   +P+V  +  +
Sbjct: 284 GEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAI 343

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           I G  R  K    I + HKM ++ ++P+    + +++ L
Sbjct: 344 ISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINEL 382



 Score = 41.2 bits (95), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 13/223 (5%)

Query: 166 YCKNKEVEEALSLYR-EMVSKGIKPTVVTYNTL--FLGLFEIHQVEHALKLFEEMQ---- 218
           + KN E+    S  R   VSK I   + T   L  F  + + H  +H +  F  M     
Sbjct: 56  WPKNPELNRLASTLRPHHVSKIINTHINTDTALQFFYWISKRHFYKHDMGCFVSMLNRLV 115

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE-----LDIQAYNCLIDGLCK 273
           +D + A        +   C+N   ++ V  F   GI   +       + ++N L+  L K
Sbjct: 116 KDKILAPADHVRILMIKACRNEDELKRVTDFLH-GISSSDSGLFGFTLYSFNTLLLQLGK 174

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
              +  A  ++  +    +   ++T+N MI+ LC  G++ +A  +F  + +  + P+   
Sbjct: 175 FDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFT 234

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + +LI G  R  K  K  E+  +M +    P++   S +++ L
Sbjct: 235 YTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGL 277


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 193/355 (54%), Gaps = 6/355 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   Y  +IDG C+ G +D A  L  +M    +  ++   NSLI+G C   + +EA+ +
Sbjct: 330 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGV 389

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+D  ++P   ++N ++D  C+ G   EA  L D M+Q  + P   TY+TL+ G C 
Sbjct: 390 ITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCR 449

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A +++  M   G   D+V Y+ L++G  K +  E A +L+++++++G   + +T
Sbjct: 450 VGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRIT 509

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +NT+  GL ++ ++  A ++F++M+    + D  TY T IDG CK   + +A   F+  G
Sbjct: 510 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQA---FKVKG 566

Query: 254 ILKCEL---DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            ++ E     I+ YN LI GL KS RL    +L   +  R L  ++VTY  +I G C +G
Sbjct: 567 AMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEG 626

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +DKA   + +M EN ++ N+II  T++ G  R+ +  +   L+ KM +    PD
Sbjct: 627 MLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD 681



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 205/466 (43%), Gaps = 102/466 (21%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP++ +YNT++DG C+EG   +A  L  +M  E I P V+TYN+L+ GLC    +++A +
Sbjct: 399 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 458

Query: 73  LFFEMMDQGVQP-----------------------------------SVVTFNVIMDELC 97
           ++  MM  GV P                                   S +TFN ++  LC
Sbjct: 459 IWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLC 518

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES-------- 149
           K GKM EA  + D M      P+  TY TL+DG+C    + +A ++ G+ME         
Sbjct: 519 KMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIE 578

Query: 150 ---------------------------MGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
                                       G   + V+Y  LI+G+CK   +++A S Y EM
Sbjct: 579 MYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEM 638

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM----------------------QRD 220
              G+   ++  +T+  GL+ + +++ A  L ++M                      Q+ 
Sbjct: 639 TENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKI 698

Query: 221 DVAADTS----------TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
             + D S           YN  I GLCK G + +A   F  L +     D   Y  LI G
Sbjct: 699 ADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHG 758

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
              +G ++ A  L   + RR LV ++VTYN +I+GLC    +D+A  LF  + +  + PN
Sbjct: 759 YSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPN 818

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           V+ + TLI G+ +I       +L  KM E+ + P     S +++ L
Sbjct: 819 VVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 170/318 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N    N++I+G CK G + +A+ +  +M   N+ PD  +YN+L+ G C     +EA  
Sbjct: 364 KTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFN 423

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ +G++P+V+T+N ++  LC+ G  D+A ++  LM++  V P+   YSTL+DG  
Sbjct: 424 LCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLF 483

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                  A  L+  + + G     +++N +I+G CK  ++ EA  ++ +M   G  P  +
Sbjct: 484 KMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGI 543

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  G  +   V  A K+   M+R+ ++     YN+ I GL K+  +VE  +L   +
Sbjct: 544 TYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEM 603

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           GI     +I  Y  LIDG CK G L+ A   +  +    L A+++  + M+ GL   G++
Sbjct: 604 GIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRI 663

Query: 313 DKAHDLFLDMEENAVAPN 330
           D+A+ L   M ++   P+
Sbjct: 664 DEANLLMQKMVDHGFFPD 681



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 170/361 (47%), Gaps = 32/361 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY T+IDG CK   V +A  +   M+ E I+P +  YNSLI GL  +    E  
Sbjct: 538 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXT 597

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM  +G+ P++VT+  ++D  CK G +D+A      M +  +  N    ST++ G 
Sbjct: 598 DLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGL 657

Query: 132 CLTGKINRAEELFGSMESMG----------------------------CK----HDDVSY 159
              G+I+ A  L   M   G                            CK     +++ Y
Sbjct: 658 YRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVY 717

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           NI I G CK  +V++A   +  +  KG  P   TY TL  G      V+ A +L +EM R
Sbjct: 718 NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLR 777

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
             +  +  TYN  I+GLCK+  +  A  LF  L       ++  YN LIDG CK G ++ 
Sbjct: 778 RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDA 837

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A +L   +    +   VVTY+ +I+GLC  G ++++  L   M +  V   +I + TL+ 
Sbjct: 838 AFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQ 897

Query: 340 G 340
           G
Sbjct: 898 G 898



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 165/331 (49%), Gaps = 1/331 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +   ++ I+    ++G    A  +F  M      P + + NSL++ L    + + A  ++
Sbjct: 155 SPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVY 214

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M+  G+ P V   +++++  CK+GK+DEA+  +  M    V PN  TY +L++G+   
Sbjct: 215 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSL 274

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVT 193
           G +  A+ +   M   G   + V+Y +LI GYCK  +++EA  + R M  +  + P    
Sbjct: 275 GDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERA 334

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G     +++ A++L +EM R  +  +    N+ I+G CK G I EA  +   + 
Sbjct: 335 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 394

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D  +YN L+DG C+ G    A  L   + +  +   V+TYN ++ GLC  G  D
Sbjct: 395 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 454

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
            A  ++  M +  VAP+ + + TL+ G  ++
Sbjct: 455 DALQIWHLMMKXGVAPDEVGYSTLLDGLFKM 485



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 153/308 (49%), Gaps = 1/308 (0%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +F  M   G  PS+ + N +++ L KNG+   A  +   M++  + P+ F  S +++
Sbjct: 175 ALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVN 234

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            FC  GK++ A      ME++G + + V+Y+ LINGY    +VE A  + + M  KG+  
Sbjct: 235 AFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSR 294

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD-VAADTSTYNTFIDGLCKNGYIVEAVEL 248
            VVTY  L  G  +  +++ A K+   MQ +  +  D   Y   IDG C+ G I +AV L
Sbjct: 295 NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRL 354

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +  L  + ++   N LI+G CK G +  A  +   +    L  D  +YN ++ G C 
Sbjct: 355 LDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCR 414

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           +G   +A +L   M +  + P V+ + TL+ G  R+      +++ H M +  V PD   
Sbjct: 415 EGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVG 474

Query: 369 VSMVVDLL 376
            S ++D L
Sbjct: 475 YSTLLDGL 482



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 113/190 (59%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN + YN  I GLCK G VD A+  F  +  +   PD  TY +LIHG   A + +EA RL
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 771

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+ +G+ P++VT+N +++ LCK+  +D A RL   + Q+ + PN  TY+TL+DG+C 
Sbjct: 772 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 831

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A +L   M   G     V+Y+ LING CK+ ++E ++ L  +M+  G+   ++ 
Sbjct: 832 IGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIE 891

Query: 194 YNTLFLGLFE 203
           Y TL  G F+
Sbjct: 892 YCTLVQGGFK 901



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 107/200 (53%), Gaps = 14/200 (7%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY T+I G    G VD+A  L  +M    + P++VTYN+LI+GLC + + + A+RL
Sbjct: 747 PDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRL 806

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F ++  +G+ P+VVT+N ++D  CK G MD A +L D M++  + P+  TYS L++G C 
Sbjct: 807 FHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCK 866

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G I R+ +L   M   G     + Y  L+ G  K        S Y EM     KP  + 
Sbjct: 867 HGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKT-------SNYNEMS----KPEALK 915

Query: 194 YNTLFLGLFEIHQVEHALKL 213
            N   +  F + + +H+ K 
Sbjct: 916 QN---MNCFLLPKFKHSWKF 932


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 193/355 (54%), Gaps = 6/355 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   Y  +IDG C+ G +D A  L  +M    +  ++   NSLI+G C   + +EA+ +
Sbjct: 296 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGV 355

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+D  ++P   ++N ++D  C+ G   EA  L D M+Q  + P   TY+TL+ G C 
Sbjct: 356 ITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCR 415

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A +++  M   G   D+V Y+ L++G  K +  E A +L+++++++G   + +T
Sbjct: 416 VGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRIT 475

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +NT+  GL ++ ++  A ++F++M+    + D  TY T IDG CK   + +A   F+  G
Sbjct: 476 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQA---FKVKG 532

Query: 254 ILKCE---LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            ++ E     I+ YN LI GL KS RL    +L   +  R L  ++VTY  +I G C +G
Sbjct: 533 AMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEG 592

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +DKA   + +M EN ++ N+II  T++ G  R+ +  +   L+ KM +    PD
Sbjct: 593 MLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD 647



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 201/366 (54%), Gaps = 7/366 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY+++I+G    G V+ AK +   M  + ++ +VVTY  LI G C     +EA++
Sbjct: 224 EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEK 283

Query: 73  LFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +   M ++  + P    + V++D  C+ GK+D+A RLLD M++  ++ N F  ++L++G+
Sbjct: 284 VLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGY 343

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+I+ AE +   M     K D  SYN L++GYC+     EA +L  +M+ +GI+PTV
Sbjct: 344 CKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTV 403

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYNTL  GL  +   + AL+++  M +  VA D   Y+T +DGL K      A  L++ 
Sbjct: 404 LTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKD 463

Query: 252 L---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           +   G  K  +    +N +I GLCK G++  A E+F  +       D +TY  +I G C 
Sbjct: 464 ILARGFTKSRI---TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 520

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
              + +A  +   ME   ++P++ ++ +LI G  +  +  +V +LL +M  + + P+   
Sbjct: 521 ASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVT 580

Query: 369 VSMVVD 374
              ++D
Sbjct: 581 YGALID 586



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 187/385 (48%), Gaps = 32/385 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP++ +YNT++DG C+EG   +A  L  +M  E I P V+TYN+L+ GLC    +++A +
Sbjct: 365 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 424

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++  MM +GV P  V ++ ++D L K    + AS L   ++ R    +  T++T++ G C
Sbjct: 425 IWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLC 484

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  AEE+F  M+ +GC  D ++Y  LI+GYCK   V +A  +   M  + I P++ 
Sbjct: 485 KMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIE 544

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN+L  GLF+  ++     L  EM    +  +  TY   IDG CK G + +A   +  +
Sbjct: 545 MYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEM 604

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP------------------------ 288
                  +I   + ++ GL + GR++ A  L + +                         
Sbjct: 605 TENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKI 664

Query: 289 --------RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
                   +  L+ + + YNI I GLC  G++D A   F  +      P+   + TLIHG
Sbjct: 665 ADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHG 724

Query: 341 FVRINKPSKVIELLHKMKEKKVMPD 365
           +       +   L  +M  + ++P+
Sbjct: 725 YSAAGNVDEAFRLRDEMLRRGLVPN 749



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 171/318 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N    N++I+G CK G + +A+ +  +M   N+ PD  +YN+L+ G C     +EA  
Sbjct: 330 KTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFN 389

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ +G++P+V+T+N ++  LC+ G  D+A ++  LM++R V P+   YSTL+DG  
Sbjct: 390 LCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLF 449

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                  A  L+  + + G     +++N +I+G CK  ++ EA  ++ +M   G  P  +
Sbjct: 450 KMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGI 509

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  G  +   V  A K+   M+R+ ++     YN+ I GL K+  +VE  +L   +
Sbjct: 510 TYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEM 569

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           GI     +I  Y  LIDG CK G L+ A   +  +    L A+++  + M+ GL   G++
Sbjct: 570 GIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRI 629

Query: 313 DKAHDLFLDMEENAVAPN 330
           D+A+ L   M ++   P+
Sbjct: 630 DEANLLMQKMVDHGFFPD 647



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 165/331 (49%), Gaps = 1/331 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +   ++ I+    ++G    A  +F  M      P + + NSL++ L    + + A  ++
Sbjct: 121 SPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVY 180

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M+  G+ P V   +++++  CK+GK+DEA+  +  M    V PN  TY +L++G+   
Sbjct: 181 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSL 240

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVT 193
           G +  A+ +   M   G   + V+Y +LI GYCK  +++EA  + R M  +  + P    
Sbjct: 241 GDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERA 300

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G     +++ A++L +EM R  +  +    N+ I+G CK G I EA  +   + 
Sbjct: 301 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 360

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D  +YN L+DG C+ G    A  L   + +  +   V+TYN ++ GLC  G  D
Sbjct: 361 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 420

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
            A  ++  M +  VAP+ + + TL+ G  ++
Sbjct: 421 DALQIWHLMMKRGVAPDEVGYSTLLDGLFKM 451



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 153/305 (50%), Gaps = 1/305 (0%)

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  M   G  PS+ + N +++ L KNG+   A  +   M++  + P+ F  S +++ FC
Sbjct: 144 VFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFC 203

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK++ A      ME++G + + V+Y+ LINGY    +VE A  + + M  KG+   VV
Sbjct: 204 KDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVV 263

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDD-VAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           TY  L  G  +  +++ A K+   MQ +  +  D   Y   IDG C+ G I +AV L   
Sbjct: 264 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 323

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  L  + ++   N LI+G CK G +  A  +   +    L  D  +YN ++ G C +G 
Sbjct: 324 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 383

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
             +A +L   M +  + P V+ + TL+ G  R+      +++ H M ++ V PD    S 
Sbjct: 384 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 443

Query: 372 VVDLL 376
           ++D L
Sbjct: 444 LLDGL 448



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 136/304 (44%), Gaps = 67/304 (22%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY T+IDG CK   V +A  +   M+ E I+P +  YNSLI GL  +    E  
Sbjct: 504 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVT 563

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNG------------------------------- 100
            L  EM  +G+ P++VT+  ++D  CK G                               
Sbjct: 564 DLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGL 623

Query: 101 ----KMDEASRLLDLMV------------QRDVR--------------------PNAFTY 124
               ++DEA+ L+  MV            + D+R                    PN   Y
Sbjct: 624 YRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVY 683

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           +  + G C TGK++ A   F  +   G   D+ +Y  LI+GY     V+EA  L  EM+ 
Sbjct: 684 NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLR 743

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           +G+ P +VTYN L  GL +   V+ A +LF ++ +  +  +  TYNT IDG CK G +  
Sbjct: 744 RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDA 803

Query: 245 AVEL 248
           A +L
Sbjct: 804 AFKL 807



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 124/242 (51%), Gaps = 32/242 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  +IDG CKEG +DKA + + +M    ++ +++  ++++ GL      +EA  L
Sbjct: 576 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLL 635

Query: 74  FFEMMDQG--------------------------------VQPSVVTFNVIMDELCKNGK 101
             +M+D G                                + P+ + +N+ +  LCK GK
Sbjct: 636 MQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGK 695

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D+A R   ++  +   P+ FTY TL+ G+   G ++ A  L   M   G   + V+YN 
Sbjct: 696 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNA 755

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LING CK++ V+ A  L+ ++  KG+ P VVTYNTL  G  +I  ++ A KL ++M  + 
Sbjct: 756 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 815

Query: 222 VA 223
           ++
Sbjct: 816 IS 817



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 81/143 (56%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P+ + YN  I GLC     ++A+R F  +  +G  P   T+  ++      G +DEA RL
Sbjct: 678 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 737

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
            D M++R + PN  TY+ L++G C +  ++RA+ LF  +   G   + V+YN LI+GYCK
Sbjct: 738 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 797

Query: 169 NKEVEEALSLYREMVSKGIKPTV 191
              ++ A  L  +M+ +GI P++
Sbjct: 798 IGNMDAAFKLKDKMIEEGISPSI 820



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/107 (40%), Positives = 69/107 (64%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY T+I G    G VD+A  L  +M    + P++VTYN+LI+GLC + + + A+RL
Sbjct: 713 PDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRL 772

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           F ++  +G+ P+VVT+N ++D  CK G MD A +L D M++  + P+
Sbjct: 773 FHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPS 819



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 51/73 (69%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTYN +I+GLCK   VD+A+ LF ++  + + P+VVTYN+LI G C   + + A +L
Sbjct: 748 PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKL 807

Query: 74  FFEMMDQGVQPSV 86
             +M+++G+ PS+
Sbjct: 808 KDKMIEEGISPSI 820


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 201/364 (55%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC P    ++ +   L + G ++ A   FL+M    + P   + N+ +H L  A + + +
Sbjct: 57  VCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLS 116

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           +  F +M+  G+ P+V T+N+++  +CK G M  A  L + M +  + P+  TY+TL+DG
Sbjct: 117 RDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDG 176

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G ++ +  LF  M+ MGC+ D ++YN LIN +CK K +  A   +REM  K +KP 
Sbjct: 177 YGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPN 236

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V++Y+TL   L +   ++ A+K F +M R  +  +  TY++ ID  CK G + EA  L  
Sbjct: 237 VISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLAD 296

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +     +L+I  Y  L+DGLC+ G +  A ELFR++ +  +  ++  Y  +IHG     
Sbjct: 297 EMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVR 356

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            MDKA +LF +M E  + P+++++ T++ G    +K  +   ++ +MKE  +  +  I +
Sbjct: 357 SMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYT 416

Query: 371 MVVD 374
            ++D
Sbjct: 417 TLMD 420



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 191/354 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ +TYN +I+  CK   + +A   F +MK +++ P+V++Y++LI  LC       A 
Sbjct: 198 CEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAI 257

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           + F +M   G+ P+  T++ ++D  CK G + EA  L D M+Q  V  N  TY+TL+DG 
Sbjct: 258 KFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGL 317

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +N AEELF +M   G   +  +Y  LI+G+ K + +++A+ L+ EM  K IKP +
Sbjct: 318 CEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDI 377

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           + + T+  GL    ++E    +  EM+   + A+   Y T +D   K G   EA+ L   
Sbjct: 378 LLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEE 437

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  L  E+ +  +  LIDGLCK G ++ A+  F  +P   L  +V  Y  +I GLC +  
Sbjct: 438 MRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNC 497

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +  A  LF +M++  + P+ I +  +I G ++     + + + +KM E  +  D
Sbjct: 498 IGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELD 551



 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 182/361 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+IDG  K G +D++  LF +MK     PDV+TYN+LI+  C       A   
Sbjct: 165 PDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEF 224

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM D+ ++P+V++++ ++D LCK G M  A +    M +  + PN FTYS+L+D  C 
Sbjct: 225 FREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCK 284

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A  L   M       + V+Y  L++G C+   + EA  L+R M   G+ P +  
Sbjct: 285 AGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQA 344

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G  ++  ++ A++LF EM+  D+  D   + T + GLC    + E   +   + 
Sbjct: 345 YTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMK 404

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +   Y  L+D   K+G    A+ L   +        VVT+  +I GLC  G + 
Sbjct: 405 ESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQ 464

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A   F  M ++ + PNV ++  LI G  + N      +L  +M++K ++PD    + ++
Sbjct: 465 EAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMI 524

Query: 374 D 374
           D
Sbjct: 525 D 525



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 180/361 (49%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN ++Y+T+ID LCKEG +  A   F+ M    + P+  TY+SLI   C A +  EA  
Sbjct: 234 KPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFM 293

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+ + V  ++VT+  ++D LC+ G M+EA  L   M +  V PN   Y+ L+ G  
Sbjct: 294 LADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHI 353

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +++A ELF  M     K D + +  ++ G C   ++EE   +  EM   GI    V
Sbjct: 354 KVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPV 413

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y TL    F+      A+ L EEM+         T+   IDGLCK G + EA+  F  +
Sbjct: 414 IYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRM 473

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + ++  Y  LIDGLCK+  +  A +LF  +  + ++ D + Y  MI G    G  
Sbjct: 474 PDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNF 533

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A ++   M E  +  ++  + +L+ G  +  +  +  + L +M  K ++PD ++ + +
Sbjct: 534 QEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRL 593

Query: 373 V 373
           +
Sbjct: 594 L 594



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 174/350 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY+++ID  CK G + +A  L  +M  E+++ ++VTY +L+ GLC     NEA+ L
Sbjct: 270 PNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEEL 329

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   GV P++  +  ++    K   MD+A  L + M ++D++P+   + T++ G C 
Sbjct: 330 FRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCS 389

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+   + +   M+  G   + V Y  L++ Y K     EA++L  EM   G + TVVT
Sbjct: 390 ESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVT 449

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  GL +   V+ A+  F  M   D+  + + Y   IDGLCKN  I +A +LF  + 
Sbjct: 450 FCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQ 509

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D  AY  +IDG  K G  + AL +   +    +  D+  Y  ++ GL   GQ+ 
Sbjct: 510 DKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQ 569

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           +A     +M    + P+  +   L+     +    + IEL +++ EK ++
Sbjct: 570 QARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLI 619



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 164/325 (50%), Gaps = 8/325 (2%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N VTY T++DGLC+EG +++A+ LF  M    + P++  Y +LIHG       ++A  LF
Sbjct: 306 NIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELF 365

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM ++ ++P ++ +  I+  LC   K++E   ++  M +  +  N   Y+TLMD +   
Sbjct: 366 NEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKA 425

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G    A  L   M  +G +   V++  LI+G CK   V+EA+  +  M    ++P V  Y
Sbjct: 426 GNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVY 485

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  GL + + +  A KLF+EMQ  ++  D   Y   IDG  K+G   EA+ +   +  
Sbjct: 486 TALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMME 545

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           +  ELD+ AY  L+ GL + G+++ A +    +  + ++ D      ++      G +D+
Sbjct: 546 MGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDE 605

Query: 315 AHDLFLDMEE--------NAVAPNV 331
           A +L  ++ E        N   PN+
Sbjct: 606 AIELQNELVEKGLIHGNSNPAVPNI 630



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 121/236 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ + + TI+ GLC E  +++ K +  +MK   I  + V Y +L+     A +  EA  
Sbjct: 374 KPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAIN 433

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM D G + +VVTF  ++D LCK G + EA      M   D++PN   Y+ L+DG C
Sbjct: 434 LLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLC 493

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               I  A++LF  M+      D ++Y  +I+G  K+   +EAL++  +M+  GI+  + 
Sbjct: 494 KNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLY 553

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
            Y +L  GL +  QV+ A K   EM    +  D +     +    + G I EA+EL
Sbjct: 554 AYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIEL 609



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 88/188 (46%)

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P    ++ LF  L E+  +E A + F  M +  V     + N F+  L K G    + + 
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           FR +        +  YN +I  +CK G +  A  LF  + +  L  D+VTYN +I G   
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G +D++  LF +M+     P+VI +  LI+ F +     +  E   +MK+K + P+   
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239

Query: 369 VSMVVDLL 376
            S ++D L
Sbjct: 240 YSTLIDAL 247



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 73/142 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN   Y  +IDGLCK   +  AK LF +M+ +N+ PD + Y ++I G     ++ EA  
Sbjct: 479 QPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALN 538

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +MM+ G++  +  +  ++  L + G++ +A + L  M+ + + P+    + L+    
Sbjct: 539 MRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHY 598

Query: 133 LTGKINRAEELFGSMESMGCKH 154
             G I+ A EL   +   G  H
Sbjct: 599 ELGNIDEAIELQNELVEKGLIH 620


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 189/354 (53%), Gaps = 2/354 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P   TY +++DG  K G +D+A     +       PD VTY S+I GLC      E  
Sbjct: 285 CFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 344

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             F EM ++G +P  VT+  ++D   K   + +A R+   M+Q     +  TY+ ++DG 
Sbjct: 345 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 404

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++  A   F +ME  GC    V+Y+ L++G+C    V  A+ L+R M+ +G +P +
Sbjct: 405 CKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNL 464

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN-GYIVEAVELFR 250
           V+YN +  GL    ++  A   FE++ +  +  D  T+N+F+ GLC+    + + VELF 
Sbjct: 465 VSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFE 524

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
           ++       ++ +Y+ L+DG+C++G LE+ LE+F  +  R +  DVV +N +I  LC  G
Sbjct: 525 SMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAG 584

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           ++D+A ++F ++E  + AP+   + +L+    R  +  +   L   MK +   P
Sbjct: 585 RVDEALEVFRELERRS-APDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAP 637



 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 193/367 (52%), Gaps = 6/367 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V +N +I  LC  G ++ A A F ++  ++++    T+N L+  LC A    EA  
Sbjct: 217 EPDVVIHNLVIRQLCASGNLEDALAYFDELD-DSLDLTHFTFNPLVAALCKAERTEEAIA 275

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +M ++   P++ T+  ++D   K G++DEA   L   V+R   P+A TY++++DG C
Sbjct: 276 FVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLC 335

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++    E F  M + G + D V+Y  LI+G+ K K + +A  +YR+M+  G   + V
Sbjct: 336 KLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTV 395

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN +  GL +  +V  A   F  M+     A   TY+  +DG C  G +  AVELFR +
Sbjct: 396 TYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM 455

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               CE ++ +YN +I GLC++G+L  A   F  L +R L  DV T+N  +HGLC   ++
Sbjct: 456 LDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQ--RL 513

Query: 313 DKAHD---LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           D   D   LF  M     +PN+  +  L+ G  R       +E+ H+M  + V PD  + 
Sbjct: 514 DTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVF 573

Query: 370 SMVVDLL 376
           + ++  L
Sbjct: 574 NTLIRWL 580



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 190/376 (50%), Gaps = 11/376 (2%)

Query: 4   GNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMK----GENINPDVVTYNSLIH 59
           GNG     C+P+   Y  +I GL K G +D+A     QM        + PDVV +N +I 
Sbjct: 174 GNG-----CRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIR 228

Query: 60  GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
            LC + +  +A   +F+ +D  +  +  TFN ++  LCK  + +EA   +  M +R   P
Sbjct: 229 QLCASGNLEDAL-AYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFP 287

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
             FTY++L+DGF   G+++ A          G   D V+Y  +I+G CK   VEE    +
Sbjct: 288 TLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERF 347

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            EM ++G +P  VTY  L  G  +   +  A +++ +M +      T TYN  +DGLCK 
Sbjct: 348 HEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKA 407

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G + EA   F  +    C   +  Y+ L+DG C  G +  A+ELFR +  R    ++V+Y
Sbjct: 408 GRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSY 467

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV-RINKPSKVIELLHKMK 358
           NI+I GLC  G++ KA+  F  + +  + P+V  F + +HG   R++     +EL   M 
Sbjct: 468 NIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMV 527

Query: 359 EKKVMPDASIVSMVVD 374
            +   P+    S+++D
Sbjct: 528 SQGTSPNLHSYSILMD 543



 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 193/365 (52%), Gaps = 10/365 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V +  +I+GLC+E  +D+A ++  +       PD VTYN  I GLC A   ++A 
Sbjct: 37  CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 96

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  +M ++   P+ VT+  ++D L K G++DEA  +L+ MV++   P   TY+ ++DG 
Sbjct: 97  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGL 156

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV----SKGI 187
              G++  A  +F  M   GC+ D   Y  LI+G  K  +++EAL    +MV    ++G+
Sbjct: 157 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGV 216

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P VV +N +   L     +E AL  F+E+  D +     T+N  +  LCK     EA+ 
Sbjct: 217 EPDVVIHNLVIRQLCASGNLEDALAYFDELD-DSLDLTHFTFNPLVAALCKAERTEEAIA 275

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
             + +   +C   +  Y  L+DG  K GRL+ AL   +    R  + D VTY  +I GLC
Sbjct: 276 FVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLC 335

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G++++  + F +M      P+ + +  LI GF++    +K+I   H++  ++++   +
Sbjct: 336 KLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMK----AKMIPKAHRVY-RQMLQSGT 390

Query: 368 IVSMV 372
           +VS V
Sbjct: 391 VVSTV 395



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 183/393 (46%), Gaps = 40/393 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ VTYN  IDGLCK   VD A  L  +M  +   P  VTY +L+ GL  A   +EA 
Sbjct: 72  CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAM 131

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  +M+++G  P++ T+ V++D L K G+++EA R+   M+    RP+AF Y+ L+ G 
Sbjct: 132 AILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGL 191

Query: 132 CLTGKINRAEELFGSMESMGCKH----DDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
              GK++ A      M   GC      D V +N++I   C +  +E+AL+ + E+    +
Sbjct: 192 AKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL-DDSL 250

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
             T  T+N L   L +  + E A+   ++M          TY + +DG  K G + EA+ 
Sbjct: 251 DLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALL 310

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF----------------------- 284
             +         D   Y  +IDGLCK GR+E   E F                       
Sbjct: 311 QLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFM 370

Query: 285 ------------RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
                       R + +   V   VTYNI++ GLC  G++ +A+  FL MEE      V+
Sbjct: 371 KAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVV 430

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +  L+ GF      S  +EL  +M ++   P+
Sbjct: 431 TYSALMDGFCSEGNVSAAVELFRRMLDRGCEPN 463



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 143/289 (49%), Gaps = 8/289 (2%)

Query: 90  NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
             +++ LCK G++D A  LLD M      P+   ++ +++G C   +++ A  +      
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFSVLERAVR 69

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
            GC+ D V+YN+ I+G CK + V++A  L ++M  K   PT VTY  L  GL +  +++ 
Sbjct: 70  AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           A+ + E+M     +    TY   IDGL K G + EA  +F  +    C  D   Y  LI 
Sbjct: 130 AMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIS 189

Query: 270 GLCKSGRLEIAL----ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
           GL K G+L+ AL    ++  +   R +  DVV +N++I  LC  G ++ A   F D  ++
Sbjct: 190 GLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYF-DELDD 248

Query: 326 AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           ++      F  L+    +  +  + I  + KM E++  P     + +VD
Sbjct: 249 SLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVD 297



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 3/152 (1%)

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           DT      ++GLCK G +  A+ L   L  + C  D+ A+  +I+GLC+  RL+ A  + 
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLL---LDEMPCSPDMVAFTVVINGLCREKRLDEAFSVL 64

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
               R     D VTYN+ I GLC   ++D A  L   M+E    P  + +  L+ G ++ 
Sbjct: 65  ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKA 124

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +  + + +L +M EK   P     ++V+D L
Sbjct: 125 GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGL 156



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
           +D +    L++GLCK+G+L+ A+ L   +P      D+V + ++I+GLC + ++D+A  +
Sbjct: 7   VDTRVCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSV 63

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                     P+ + +   I G  +  +     +LL KM EKK +P     + +VD L
Sbjct: 64  LERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGL 121



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 3/84 (3%)

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
           + D      +++GLC  GQ+D+A    L ++E   +P+++ F  +I+G  R  +  +   
Sbjct: 6   LVDTRVCTALLNGLCKTGQLDRA---MLLLDEMPCSPDMVAFTVVINGLCREKRLDEAFS 62

Query: 353 LLHKMKEKKVMPDASIVSMVVDLL 376
           +L +       PD    ++ +D L
Sbjct: 63  VLERAVRAGCEPDYVTYNVFIDGL 86


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 197/363 (54%), Gaps = 3/363 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + VTY T+IDGLCK G +D A+AL  +M      P+VVTY +LI GLC A   ++A +  
Sbjct: 44  SVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTV 103

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDVRPNAFTYSTLMDGFCL 133
             M+  G +P +VT+N ++  LC   +MD+A  +L +LM++    P+  TY+T + G C 
Sbjct: 104 KRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCK 163

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+++  E+   M+  G   D V++  +I+G CK   +++A  +++ M+ +G  P  +T
Sbjct: 164 AGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLT 223

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ +   L   ++++   ++ E M +    A ++TY   I  L + G I  A   +    
Sbjct: 224 YSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAM 283

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C +++  +N  I  LC+SG+  +A  +   +     + ++++YN +I GLC  G +D
Sbjct: 284 EAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVD 343

Query: 314 KAHDLFLDM-EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV-MPDASIVSM 371
            A  L   M +     P+VI F TLI GF +  + S+  +LL +MK K + +PD    + 
Sbjct: 344 DAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNT 403

Query: 372 VVD 374
           ++D
Sbjct: 404 MID 406



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 182/352 (51%), Gaps = 7/352 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY  +IDGLCK      A     +M      PD+VTYNSLIHGLC AN  ++A 
Sbjct: 76  CAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAG 135

Query: 72  RLFFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            +  E+M + G  P VVT+N  +  LCK GK+D+   +L+ M +  + P+  T+ +++ G
Sbjct: 136 LVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISG 195

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C   +I+ A ++F  M   GC  D ++Y+I+++   +   ++    +   MV  G    
Sbjct: 196 LCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYAL 255

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             TY  L   L     +E A   +E+        +  T+N FI  LC++G    A  +  
Sbjct: 256 SATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNIL- 314

Query: 251 TLGILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRS-LPRRVLVADVVTYNIMIHGLC 307
            LG+++     ++ +YN +IDGLCKSG ++ A +L R  L       DV+ +N +I G C
Sbjct: 315 -LGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFC 373

Query: 308 NDGQMDKAHDLFLDME-ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
             G++ +A  L  +M+ +N   P+V+ + T+I G  +     +   LL +M+
Sbjct: 374 KAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQ 425



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 120/229 (52%), Gaps = 1/229 (0%)

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M S   + D   YN LI G CK ++   AL L   M + G   +VVTY TL  GL +   
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           ++ A  L ++M     A +  TY   IDGLCK     +A++  + +    CE D+  YN 
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 267 LIDGLCKSGRLEIA-LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
           LI GLC + R++ A L L   +     + DVVTYN  I GLC  G++DK  ++  +M+  
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 326 AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            ++P+V+ F ++I G  + N+     ++   M E+  +PD+   S+++D
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLD 229



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 97/173 (56%), Gaps = 2/173 (1%)

Query: 16  TVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFF 75
           + TY  +I  L + G ++ A   + Q        +V T+N+ I  LC +  +  AK +  
Sbjct: 256 SATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILL 315

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV-RPNAFTYSTLMDGFCLT 134
            M++ G  P+++++N ++D LCK+G +D+A +L   M+     +P+   ++TL+ GFC  
Sbjct: 316 GMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKA 375

Query: 135 GKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           G++++A++L   M++   C  D V+YN +I+G  K   +++A  L  EM + G
Sbjct: 376 GRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 81/142 (57%), Gaps = 2/142 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C     T+N  I  LC+ G    AK + L M      P++++YN +I GLC + + ++A 
Sbjct: 287 CVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAW 346

Query: 72  RLFFEMMDQGV-QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV-RPNAFTYSTLMD 129
           +L  +M+D G  +P V+ FN ++   CK G++ +A +LL  M  +++  P+  TY+T++D
Sbjct: 347 KLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMID 406

Query: 130 GFCLTGKINRAEELFGSMESMG 151
           G    G + +A+ L   M+++G
Sbjct: 407 GQSKFGSLKQAKLLLEEMQAVG 428


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 202/384 (52%), Gaps = 20/384 (5%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            +GV+  P+  TY  +ID  CK G +++A++ F +M+    +P VVTY +L+H       
Sbjct: 483 SVGVI--PDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQ 540

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV------------- 113
             +A  +F  M+D G  P+ +T++ ++D LCK G+  +A  +   M+             
Sbjct: 541 VPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFE 600

Query: 114 ---QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
                 + PN  TY  L+DG C   K+  A+EL   M S GC+ + + Y+ LI+G+CK  
Sbjct: 601 GEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVG 660

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
           +++ A  ++  M   G  PTV TY +L   +F+  +++ A+K+  +M       +  TY 
Sbjct: 661 KLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYT 720

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
             IDGLC+ G   +A++L   +    C  ++  Y  LIDGL KSG+++++L+LF  +  +
Sbjct: 721 AMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQ 780

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
               + VTY ++I+  C  G +D+AH L  +M++      V  + +++ GF +  K    
Sbjct: 781 GCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSK--KFIAS 838

Query: 351 IELLHKMKEKKVMPDASIVSMVVD 374
           + LL +++   ++  A +  +++D
Sbjct: 839 LGLLEELESHGMVSIAPVYGLLID 862



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 199/457 (43%), Gaps = 92/457 (20%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY T++ G  K+  +   K +   M  E  NP+   +NSL+H  C+A D+  A 
Sbjct: 305 CIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAY 364

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKN-------------------------------- 99
           +L   M   G  P  V +N+ +  +C                                  
Sbjct: 365 KLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTA 424

Query: 100 ---------GKMDEASRLLDLMVQR----------------------------------- 115
                    GK D+A +++ LM+++                                   
Sbjct: 425 NFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSV 484

Query: 116 DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
            V P+ +TY+ L+D FC  G I +A   F  MES+GC    V+Y  L++ Y K K+V +A
Sbjct: 485 GVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQA 544

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM----------------QR 219
             ++  MV  G  P  +TY+ L  GL +  + + A +++ +M                  
Sbjct: 545 SDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHT 604

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
           D +A +  TY   IDGLCK   +V+A EL   +    CE +   Y+ LIDG CK G+L+ 
Sbjct: 605 DSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDN 664

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A E+F  + +   +  V TY  +I  +  D ++D A  +   M E++  PNV+ +  +I 
Sbjct: 665 AQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMID 724

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           G  RI +  K ++LL  M+++   P+    + ++D L
Sbjct: 725 GLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGL 761



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 198/404 (49%), Gaps = 54/404 (13%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKG----------------ENINPDVVTYN 55
           C PNT+TY+ ++DGLCK G   KA  ++ +M G                ++I P+VVTY 
Sbjct: 556 CAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYG 615

Query: 56  SLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           +LI GLC A+   +A+ L   M   G +P+ + ++ ++D  CK GK+D A  +   M + 
Sbjct: 616 ALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKC 675

Query: 116 DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
              P   TY++L+D      +++ A ++   M    C  + V+Y  +I+G C+  E ++A
Sbjct: 676 GYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKA 735

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
           L L   M  +G  P VVTY +L  GL +  +V+ +L+LF +M     A +  TY   I+ 
Sbjct: 736 LKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINH 795

Query: 236 LCKNGYIVEAVELFR---------------------------TLGILKCELDIQA----- 263
            C  G + EA  L                             +LG+L+ EL+        
Sbjct: 796 CCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLE-ELESHGMVSIA 854

Query: 264 --YNCLIDGLCKSGRLEIALELFRSL---PRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
             Y  LID   K+GRLE ALEL + +      + +    TY  +I  LC   Q++KA +L
Sbjct: 855 PVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFEL 914

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           + ++    V P +  F+ LI G +++NK ++ ++L + M ++ V
Sbjct: 915 YSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/421 (23%), Positives = 175/421 (41%), Gaps = 57/421 (13%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTY------------------ 54
           K +TV    +I GL +    D+A +   +M+  +  P+VVTY                  
Sbjct: 271 KLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKR 330

Query: 55  -----------------NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
                            NSL+H  C+A D+  A +L   M   G  P  V +N+ +  +C
Sbjct: 331 IISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSIC 390

Query: 98  KNGKMDE------ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
              ++        A ++ + M+      N    +      C  GK ++A ++   M   G
Sbjct: 391 SGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKG 450

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
              D  +Y+ +I   C+  +VE+A  L++EM S G+ P V TY  L     ++  +E A 
Sbjct: 451 FVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQAR 510

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
             F+EM+    +    TY   +    K   + +A ++F  +    C  +   Y+ L+DGL
Sbjct: 511 SWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGL 570

Query: 272 CKSGRLEIALELFRSL----------------PRRVLVADVVTYNIMIHGLCNDGQMDKA 315
           CK+G  + A E++  +                    +  +VVTY  +I GLC   ++  A
Sbjct: 571 CKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDA 630

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
            +L   M  N   PN II+  LI GF ++ K     E+  +M +   +P     + ++D 
Sbjct: 631 QELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDA 690

Query: 376 L 376
           +
Sbjct: 691 M 691



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/414 (23%), Positives = 164/414 (39%), Gaps = 60/414 (14%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T       LCKEG    A    + ++ E+   D V    +I GL  A+ ++EA      M
Sbjct: 244 TVGCFAQALCKEGRWSDA---LVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRM 300

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
                 P+VVT+  ++    K  ++    R++ +M+     PN   +++L+  +C     
Sbjct: 301 RCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDY 360

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV------------------------- 172
             A +L   M   GC    V YNI I   C  +E+                         
Sbjct: 361 PYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNK 420

Query: 173 ----------------EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
                           ++A  + + M+ KG  P   TY+ +   L E  +VE A  LF+E
Sbjct: 421 VNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQE 480

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M+   V  D  TY   ID  CK G I +A   F  +  + C   +  Y  L+    K+ +
Sbjct: 481 MKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQ 540

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM-------------- 322
           +  A ++F  +       + +TY+ ++ GLC  G+  KA +++  M              
Sbjct: 541 VPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFE 600

Query: 323 --EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
               +++APNV+ +  LI G  + +K     ELL  M      P+  I   ++D
Sbjct: 601 GEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALID 654



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 160/396 (40%), Gaps = 40/396 (10%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N I+   C+ G   KA     ++K     P   TYN+L+  L  A   +   R+  EM +
Sbjct: 176 NVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSE 235

Query: 80  QGVQPSVVTFNVIMDELCKNGK--------------------------------MDEASR 107
            G      T       LCK G+                                 DEA  
Sbjct: 236 LGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAIS 295

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
            L  M      PN  TY TL+ GF    ++   + +   M + GC  +   +N L++ YC
Sbjct: 296 FLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYC 355

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG-------LFEIHQVEHALKLFEEMQRD 220
             ++   A  L   M   G  P  V YN +F+G       L     +  A K++EEM   
Sbjct: 356 NARDYPYAYKLLNRMAGCGCPPGYVVYN-IFIGSICSGEELPSPDLLALAEKVYEEMLAS 414

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
               +      F   LC  G   +A ++ + +       D   Y+ +I  LC++ ++E A
Sbjct: 415 SCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKA 474

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
             LF+ +    ++ DV TY I+I   C  G +++A   F +ME    +P+V+ +  L+H 
Sbjct: 475 FLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHA 534

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +++  +  +  ++ H+M +    P+    S +VD L
Sbjct: 535 YLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGL 570


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 185/352 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+   Y TIIDG+CK+G  + A  +  +M    + P+VV YN+++ GLC A  W EA+
Sbjct: 254 CTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAE 313

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM  +      VTFN+++D  C+NG +D    LL+ M++    P+  TY+T+++GF
Sbjct: 314 DLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGF 373

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G ++ A  L  +M + GCK + +SY I++ G C+ +   +A  L   M+ +G  P  
Sbjct: 374 CKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNP 433

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NTL   + +    E A++L ++M  +  + D  +Y+T IDGL K G   EA+EL   
Sbjct: 434 VTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 493

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       +   Y+ +   L + GR +  +++F S+    + +D   YN +I  LC   +
Sbjct: 494 MINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWE 553

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            D+A D F  M  N   PN   +  LI G        +  +LL ++  ++ +
Sbjct: 554 TDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAV 605



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 192/375 (51%), Gaps = 10/375 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  ++   N ++  +C++G VD+   L  ++      PD+V+YN+++ GLC A  W++ +
Sbjct: 174 CTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVE 233

Query: 72  RLFFEMM----------DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNA 121
            L  EM+          + G  P +  +  I+D +CK+G  + A+ +L  M    ++PN 
Sbjct: 234 ELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNV 293

Query: 122 FTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 181
             Y+T++ G C   +   AE+L   M    C  DDV++NIL++ +C+N  V+  + L  +
Sbjct: 294 VCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ 353

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M+  G  P V+TY T+  G  +   V+ A+ L + M       +T +Y   + GLC+   
Sbjct: 354 MLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAER 413

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
            V+A EL   +    C  +   +N LI+ +CK G  E A+EL + +       D+++Y+ 
Sbjct: 414 WVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYST 473

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +I GL   G+ ++A +L   M    + PN II+ ++     R  +  K+I++   +++  
Sbjct: 474 VIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDAT 533

Query: 362 VMPDASIVSMVVDLL 376
           V  DA++ + V+  L
Sbjct: 534 VRSDAALYNAVISSL 548



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 185/372 (49%), Gaps = 10/372 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFL----------QMKGENINPDVVTYNSLIHGL 61
           C+P+ V+YN ++ GLC     D  + L +          QM      PD+  Y ++I G+
Sbjct: 209 CEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGI 268

Query: 62  CHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNA 121
           C       A  +   M   G++P+VV +N ++  LC   + +EA  LL  M Q D   + 
Sbjct: 269 CKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDD 328

Query: 122 FTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 181
            T++ L+D FC  G ++R  EL   M   GC  D ++Y  +ING+CK   V+EA+ L + 
Sbjct: 329 VTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKN 388

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M + G KP  ++Y  +  GL    +   A +L   M +     +  T+NT I+ +CK G 
Sbjct: 389 MSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGL 448

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
             +A+EL + + +  C  D+ +Y+ +IDGL K+G+ E ALEL   +  + +  + + Y+ 
Sbjct: 449 AEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSS 508

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           M   L  +G+ DK   +F  +++  V  +  ++  +I    +  +  + I+    M    
Sbjct: 509 MASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNG 568

Query: 362 VMPDASIVSMVV 373
            MP+ S  ++++
Sbjct: 569 CMPNESTYTILI 580



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 164/374 (43%), Gaps = 10/374 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PN  TY  I+  LC  G +  A  +  +M            + ++   C    +  A R
Sbjct: 105 PPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVR 164

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
               +  +G        N+++  +C+ G +DE   LL  +      P+  +Y+ ++ G C
Sbjct: 165 ALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLC 224

Query: 133 LTGKINRAEEL----------FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           +  + +  EEL             M   GC  D   Y  +I+G CK+   E A  +   M
Sbjct: 225 MAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRM 284

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
            S G+KP VV YNT+  GL    + E A  L  EM ++D   D  T+N  +D  C+NG +
Sbjct: 285 PSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLV 344

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
              +EL   +    C  D+  Y  +I+G CK G ++ A+ L +++       + ++Y I+
Sbjct: 345 DRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIV 404

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           + GLC   +   A +L   M +    PN + F TLI+   +     + IELL +M     
Sbjct: 405 LKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGC 464

Query: 363 MPDASIVSMVVDLL 376
            PD    S V+D L
Sbjct: 465 SPDLISYSTVIDGL 478



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 176/377 (46%), Gaps = 14/377 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEG-FVDKAKAL-FLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           C       + I++  C+ G F    +AL  L  KG  +  D    N ++  +C     +E
Sbjct: 139 CAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTL--DSGNCNLVVSAICEQGCVDE 196

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL----------LDLMVQRDVRP 119
              L  ++   G +P +V++N ++  LC   + D+   L          L  M +    P
Sbjct: 197 GVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTP 256

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           +   Y+T++DG C  G    A ++   M S G K + V YN ++ G C  +  EEA  L 
Sbjct: 257 DLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLL 316

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            EM  +      VT+N L     +   V+  ++L E+M       D  TY T I+G CK 
Sbjct: 317 AEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKE 376

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G + EAV L + +    C+ +  +Y  ++ GLC++ R   A EL   + ++  + + VT+
Sbjct: 377 GLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTF 436

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           N +I+ +C  G  ++A +L   M  N  +P++I + T+I G  +  K  + +ELL+ M  
Sbjct: 437 NTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMIN 496

Query: 360 KKVMPDASIVSMVVDLL 376
           K + P+  I S +   L
Sbjct: 497 KGITPNTIIYSSMASAL 513



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 160/357 (44%), Gaps = 18/357 (5%)

Query: 20  NTIIDGLCKEG-FVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           + +I  LC  G   D A+AL     G+     VV YN++I G C A    +         
Sbjct: 48  SALIRSLCAAGRTADAARAL--DTAGDAAG--VVAYNAMIAGYCRAG---QVAAARRLAA 100

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
              V P+  T+  I+  LC  G + +A  +LD M  R           +++  C  G   
Sbjct: 101 AVPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A      + + GC  D  + N++++  C+   V+E + L R++ S G +P +V+YN + 
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220

Query: 199 LGLFEIHQVEHALKLFEEMQR----------DDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
            GL    + +   +L  EM R               D   Y T IDG+CK+G+   A ++
Sbjct: 221 KGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDI 280

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +     + ++  YN ++ GLC + R E A +L   + +     D VT+NI++   C 
Sbjct: 281 LSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQ 340

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +G +D+  +L   M E+   P+VI + T+I+GF +     + + LL  M      P+
Sbjct: 341 NGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPN 397


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 202/377 (53%), Gaps = 18/377 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY  +ID  CK G +++A++ F +M+    +P+VVTY +L+H    +    +A  +
Sbjct: 485 PDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDI 544

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM------VQRD----------V 117
           F  M+D    P+ VT++ ++D LCK G++ +A  + + +      V+ D          +
Sbjct: 545 FHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTI 604

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
            PN  TY  L+DG C   K++ A EL  +M + GC+ + + Y+ LI+G+CK  +++ A  
Sbjct: 605 APNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQE 664

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           ++  M   G  P+V TY +L   +F+  +++ A+K+  EM  D    +  TY   IDGL 
Sbjct: 665 VFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLS 724

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           K G I +A+ L   +    C  ++  Y  LIDGL K+G+ + +L+LF+ +  +    + V
Sbjct: 725 KVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYV 784

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           TY ++I+  C  G +D+AH L  +M+      ++  +   + GF +  K    + LL +M
Sbjct: 785 TYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSK--KFIASLGLLEEM 842

Query: 358 KEKKVMPDASIVSMVVD 374
           +  + +P A +  M++D
Sbjct: 843 ESHETVPIAPVYGMLID 859



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 193/400 (48%), Gaps = 52/400 (13%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN----------------INPDV 51
           +   C PN VTY+ +IDGLCK G + KA  ++ ++ G +                I P+V
Sbjct: 549 VDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNV 608

Query: 52  VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL 111
           VTY +LI GLC A   ++A  L   M+  G +P+ + ++ ++D  CK GK+D A  +   
Sbjct: 609 VTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLR 668

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           M +    P+  TY++L+D     G+++ A ++   M +  C  + V+Y  +I+G  K  E
Sbjct: 669 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGE 728

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           +E+AL+L   M  KG  P VVTY  L  GL +  + + +LKLF++M     A +  TY  
Sbjct: 729 IEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRV 788

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC------------------------- 266
            I+  C  G + EA  L   +        +Q Y+C                         
Sbjct: 789 LINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETV 848

Query: 267 --------LIDGLCKSGRLEIALELFRSL---PRRVLVADVVTYNIMIHGLCNDGQMDKA 315
                   LID   K+GRLE ALEL + L      + +     Y  +I  LC   Q+++A
Sbjct: 849 PIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEA 908

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
             L+ +M    + P++I+FV+L+ G + +NK  + ++L +
Sbjct: 909 FTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCY 948



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 178/376 (47%), Gaps = 20/376 (5%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +   C  N V        LC  G  +KA  +  +M  +   PD  TY  +I  LC A   
Sbjct: 409 LAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKV 468

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            ++  LF EM   GV P V T+ +++D  CK G +++A    D M      PN  TY+ L
Sbjct: 469 EKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTAL 528

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG- 186
           +  +  + ++ +A ++F  M    C  + V+Y+ LI+G CK  E+++A  +Y +++    
Sbjct: 529 LHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSG 588

Query: 187 ---------------IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
                          I P VVTY  L  GL +  +V  A +L + M       +   Y+ 
Sbjct: 589 NVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDA 648

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
            IDG CK G I  A E+F  L + KC     +  Y  LID + K GRL++A+++   +  
Sbjct: 649 LIDGFCKIGKIDNAQEVF--LRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLN 706

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
                +VVTY  MI GL   G+++KA +L   MEE   +PNV+ +  LI G  +  K   
Sbjct: 707 DSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADA 766

Query: 350 VIELLHKMKEKKVMPD 365
            ++L  +M  K   P+
Sbjct: 767 SLKLFKQMNSKGCAPN 782



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 194/422 (45%), Gaps = 57/422 (13%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG----------- 60
           C PN   +N+++ G C  G    A  LF +M      P  V YN  I             
Sbjct: 337 CNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAE 396

Query: 61  ------------------------------LCHANDWNEAKRLFFEMMDQGVQPSVVTFN 90
                                         LC    + +A ++  EMM +G  P   T+ 
Sbjct: 397 LLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYT 456

Query: 91  VIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
            ++  LC+  K++++  L   M +  V P+ +TY+ L+D FC  G I +A   F  M S+
Sbjct: 457 KVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSV 516

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           GC  + V+Y  L++ Y K+K++ +A  ++  MV     P  VTY+ L  GL +  +++ A
Sbjct: 517 GCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKA 576

Query: 211 LKLFEEM-------------QRDD---VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            +++E++             + +D   +A +  TY   IDGLCK   + +A EL   +  
Sbjct: 577 CEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLA 636

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             CE +   Y+ LIDG CK G+++ A E+F  + +   +  V TY  +I  +  DG++D 
Sbjct: 637 AGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDL 696

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  +  +M  ++  PNV+ +  +I G  ++ +  K + LL  M+EK   P+    + ++D
Sbjct: 697 AMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALID 756

Query: 375 LL 376
            L
Sbjct: 757 GL 758



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 181/449 (40%), Gaps = 95/449 (21%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T       LCK G    A AL + ++ E+ N D V    +I GL  A+ +NEA      M
Sbjct: 241 TIGYFAQALCKVG--RWADALNM-LEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRM 297

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
                 P+VVT+  ++    K  +     R++++M+     PN   +++L+ G+C  G  
Sbjct: 298 RCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDY 357

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV------------------------- 172
             A +LF  M + G     V+YNI I   C  +E+                         
Sbjct: 358 AYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNK 417

Query: 173 ----------------EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
                           E+A  + +EM+ KG  P   TY  +   L +  +VE +  LF+E
Sbjct: 418 VNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQE 477

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF---RTLG--------------ILKCEL 259
           M+R  V  D  TY   ID  CK G I +A   F   R++G               LK + 
Sbjct: 478 MKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQ 537

Query: 260 DIQA------------------YNCLIDGLCKSGRLEIALELFRSLPRR----------- 290
            IQA                  Y+ LIDGLCK+G ++ A E++  L              
Sbjct: 538 LIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFE 597

Query: 291 -----VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
                 +  +VVTY  +I GLC   ++  AH+L   M      PN I++  LI GF +I 
Sbjct: 598 GNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIG 657

Query: 346 KPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           K     E+  +M +   +P     + ++D
Sbjct: 658 KIDNAQEVFLRMTKCGYLPSVHTYTSLID 686



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/412 (24%), Positives = 153/412 (37%), Gaps = 75/412 (18%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N ++   C+ G  D+A     ++K     P  VTYN+L+  L  A       R+  EM  
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSA 232

Query: 80  QGVQPSVVTFNVIMDELCKNGK--------------------------------MDEASR 107
            G      T       LCK G+                                 +EA  
Sbjct: 233 SGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMS 292

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
            L  M      PN  TY TL+ GF    +    + +   M + GC  +   +N L++GYC
Sbjct: 293 FLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYC 352

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG--------------------------- 200
              +   A  L+  M + G  P  V YN +F+G                           
Sbjct: 353 NAGDYAYAYKLFNRMTTCGSPPGYVAYN-IFIGSICGQEELPNAELLDLVEKVYEEMLAA 411

Query: 201 ---------------LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
                          L  + + E A ++ +EM R     DTSTY   I  LC+   + ++
Sbjct: 412 SCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKS 471

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             LF+ +       D+  Y  LID  CK+G +E A   F  +       +VVTY  ++H 
Sbjct: 472 FLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHA 531

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
                Q+ +AHD+F  M + A  PN + +  LI G  +  +  K  E+  K+
Sbjct: 532 YLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKL 583



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/431 (20%), Positives = 147/431 (34%), Gaps = 108/431 (25%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           Y++L   L   +    A+RL  E+ +   +      NV++   C++G  DEA   L  + 
Sbjct: 137 YDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRCCRHGLWDEALEELGRLK 196

Query: 114 QRDVRPNAFTYSTLM---------------------DGFCLTG-----------KINRAE 141
               RP+A TY+ L+                      GFC+             K+ R  
Sbjct: 197 DFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWA 256

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
           +    +E      D V    +I+G  +     EA+S    M      P VVTY TL  G 
Sbjct: 257 DALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGF 316

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
            +  Q     ++   M  +    + S +N+ + G C  G    A +LF  +         
Sbjct: 317 LKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGY 376

Query: 262 QAYNCLIDG-----------------------------------------LCKSGRLEIA 280
            AYN  I                                           LC  G+ E A
Sbjct: 377 VAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKA 436

Query: 281 LELFRSLPRRVLVAD-----------------------------------VVTYNIMIHG 305
            ++ + + R+  V D                                   V TY I+I  
Sbjct: 437 FQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDS 496

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            C  G +++A   F +M     +PNV+ +  L+H +++  +  +  ++ H+M +    P+
Sbjct: 497 FCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPN 556

Query: 366 ASIVSMVVDLL 376
           A   S ++D L
Sbjct: 557 AVTYSALIDGL 567



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 39/68 (57%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +T  Y ++I  LC    V++A  L+ +M  + I PD++ + SL+ GL   N W+EA +L 
Sbjct: 888 STGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLC 947

Query: 75  FEMMDQGV 82
           +    +GV
Sbjct: 948 YGRCHEGV 955


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 118/354 (33%), Positives = 190/354 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYN +I+GL K+G  ++AK L  +M    +     TYN LI+G  +     EA 
Sbjct: 265 CAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEAL 324

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+ +G  P+V T+N  +  LCK G+M +A + L  M+  ++ P+  +Y+TL+ G+
Sbjct: 325 SLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGY 384

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + +A  LF  + S+      V+YN L++G C+  E+E A  L  EM+++GI P +
Sbjct: 385 CRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDI 444

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY  L  G  ++  +  A + F+EM  + +  D+  Y T I G  K G    A  L   
Sbjct: 445 VTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEE 504

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D+  YN ++DGLCK G LE A EL + +    ++ D VTY  +IH    +G+
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR 564

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + K  ++F +M    + P+V+ +  LIHG     +  +      +M+EK ++P+
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPN 618



 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 191/365 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
             P   TYN+ I GLCK G +  A      M   N+ PDVV+YN+LI+G C   +  +A 
Sbjct: 335 ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAF 394

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF E+    + P++VT+N ++D LC+ G+++ A +L   M+   + P+  TY+ L++G 
Sbjct: 395 LLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGS 454

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G ++ A+E F  M   G + D  +Y   I G  K  +   A SL  EM++KG  P +
Sbjct: 455 CKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDL 514

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           + YN +  GL ++  +E A +L ++M  D V  D  TY + I    +NG + +  E+F  
Sbjct: 515 IIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYE 574

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +        +  Y  LI G    GRLE A   F  +  + ++ +V+TYN +I+GLC   +
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRR 634

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           MD+A++ F +M E  + PN   +  LI+    +    + + L  +M ++ V PD+   S 
Sbjct: 635 MDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSA 694

Query: 372 VVDLL 376
           ++  L
Sbjct: 695 LLKQL 699



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 187/347 (53%)

Query: 28  KEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVV 87
           K+  V++  ++F +M    ++PDV   N ++  L   +  ++A  ++  M + G++P++V
Sbjct: 176 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235

Query: 88  TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
           T+N ++D  CK GK+ +   LL  M +R   PN  TY+ L++G    G+  +A+ L G M
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
              G K    +YN LI GY     + EALSL  EMV KG  PTV TYN+   GL ++ ++
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
             A++   +M  +++  D  +YNT I G C+ G +++A  LF  L  +     I  YN L
Sbjct: 356 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 415

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           +DGLC+ G LE+A +L   +    +  D+VTY I+++G C  G +  A + F +M    +
Sbjct: 416 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +   + T I G +++   S+   L  +M  K   PD  I ++VVD
Sbjct: 476 ELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVD 522



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 153/305 (50%), Gaps = 35/305 (11%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTYNT++DGLC++G ++ A+ L ++M  E I PD+VTY  L++G C     + A+  
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEF 466

Query: 74  FFEMMDQGVQ-----------------------------------PSVVTFNVIMDELCK 98
           F EM+ +G++                                   P ++ +NV++D LCK
Sbjct: 467 FDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCK 526

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
            G ++EAS LL  MV   V P+  TY++++      G++ +  E+F  M S G     V+
Sbjct: 527 LGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVT 586

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y +LI+G+     +E A   + EM  KGI P V+TYN+L  GL ++ +++ A   F EM 
Sbjct: 587 YTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMV 646

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  +  +Y   I+  C  G   EA+ L++ +     + D   ++ L+  L K  +L+
Sbjct: 647 EKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQ 706

Query: 279 IALEL 283
              +L
Sbjct: 707 AVRQL 711



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 3/218 (1%)

Query: 151 GCKHDDVSYNIL---INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
           GC   +VS  IL   I  Y K   VE+ LS++ +M+   + P V   N +   L +   +
Sbjct: 156 GCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLM 215

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
             A++++  M    +     TYNT +D  CK G + + ++L   +    C  +   YN L
Sbjct: 216 SKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVL 275

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           I+GL K G  E A  L   + +  L     TYN +I+G  N G + +A  L  +M     
Sbjct: 276 INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGA 335

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +P V  + + I+G  ++ + S  ++ L  M    ++PD
Sbjct: 336 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPD 373



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 78/136 (57%), Gaps = 3/136 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY  +I G   +G +++A   F +M+ + I P+V+TYNSLI+GLC     ++A   
Sbjct: 582 PSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNF 641

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF-- 131
           F EM+++G+ P+  ++ ++++E C  G   EA  L   M+ R V+P++ T+S L+     
Sbjct: 642 FAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGK 701

Query: 132 -CLTGKINRAEELFGS 146
            C    + + E L  S
Sbjct: 702 DCKLQAVRQLESLLDS 717


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 194/366 (53%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +C P+ VT+ ++IDGL K+G VD A  L+ QM   +  P+ V Y SLI          + 
Sbjct: 472 ICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDG 531

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            ++F EM+ +G  P +   N  MD + K G+  +   L + +  R   P+  +YS L+ G
Sbjct: 532 HKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHG 591

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               G      ELF +M+  GC  D  +YN  I+G+CK+ +V +A  L  EM +KG +PT
Sbjct: 592 LVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPT 651

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY ++  GL +I +++ A  LFEE + + +  +   Y++ IDG  K G I EA  +  
Sbjct: 652 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIME 711

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            L       ++  +NCL+D L K+  +  AL  F+++       + +TY+I+I+GLC   
Sbjct: 712 ELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVR 771

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           + +KA   + +M++  + PN I + T+I G  +    ++   L  + K    +PD++  +
Sbjct: 772 KFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYN 831

Query: 371 MVVDLL 376
            +++ L
Sbjct: 832 AIIEGL 837



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 192/365 (52%), Gaps = 1/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ + YN I+  L K+G + +A   F +MK ++  P++ TYN LI  LC A +   A 
Sbjct: 369 CIPSVIAYNCILTCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAF 427

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++   M + G+ P+V+T N+++D LCK  K+DEA  + + M  +   P+  T+ +L+DG 
Sbjct: 428 KVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGL 487

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+++ A  L+  M       + V Y  LI  + K    E+   +++EM+ +G  P +
Sbjct: 488 GKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDL 547

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
              N     +F+  +      LFEE++      D  +Y+  I GL K G+  E  ELF  
Sbjct: 548 RLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYA 607

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C LD  AYN  IDG CKSG++  A +L   +  +     VVTY  +I GL    +
Sbjct: 608 MKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDR 667

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A+ LF + + N +  NV+I+ +LI GF ++ +  +   ++ ++ +K + P+    + 
Sbjct: 668 LDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 727

Query: 372 VVDLL 376
           ++D L
Sbjct: 728 LLDAL 732



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 183/363 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN +ID LCK G V+ A  +   MK   + P+V+T N +I  LC A   +EA  +
Sbjct: 405 PNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSI 464

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M  +   P  VTF  ++D L K G++D+A RL + M+  D  PNA  Y++L+  F  
Sbjct: 465 FEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFK 524

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+     ++F  M   GC  D    N  ++   K  E  +  +L+ E+ S+G  P V++
Sbjct: 525 CGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMS 584

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  GL +        +LF  M+      DT  YNTFIDG CK+G + +A +L   + 
Sbjct: 585 YSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMK 644

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +  +  Y  +IDGL K  RL+ A  LF       L  +VV Y+ +I G    G++D
Sbjct: 645 TKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRID 704

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A+ +  ++ +  + PNV  +  L+   V+  + ++ +     MK  K  P+    S+++
Sbjct: 705 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILI 764

Query: 374 DLL 376
           + L
Sbjct: 765 NGL 767



 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 152/269 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +T  YNT IDG CK G V+KA  L  +MK +   P VVTY S+I GL   +  +EA 
Sbjct: 613 CVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAY 672

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF E    G++ +VV ++ ++D   K G++DEA  +++ ++Q+ + PN +T++ L+D  
Sbjct: 673 MLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 732

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +IN A   F +M+++    + ++Y+ILING C+ ++  +A   ++EM  +G+KP  
Sbjct: 733 VKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNT 792

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY T+  GL +   +  A  LFE  + +    D+++YN  I+GL  +   +EA ++F  
Sbjct: 793 ITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEE 852

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIA 280
             +  C +  +    L+D L K   LE A
Sbjct: 853 TRMKGCNIHTKTCIALLDALQKDECLEQA 881



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 177/365 (48%), Gaps = 7/365 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P    Y T+I  L      D    LF QM+       V  + ++I         + A  
Sbjct: 195 RPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALS 254

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM    +   +V +NV +D   K GK+D A +    +    + P+  TY++++   C
Sbjct: 255 LLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLC 314

Query: 133 LTGKINRAEELFGSME---SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
              +++ A E+F  ME   ++ C +   +YN +I GY    + +EA SL     ++G  P
Sbjct: 315 KGNRLDEAVEIFEQMEQNRNVPCAY---AYNTMIMGYGSAGKFDEAYSLLERQKARGCIP 371

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           +V+ YN +   L +  ++  AL+ FEEM++ D A + STYN  ID LCK G +  A ++ 
Sbjct: 372 SVIAYNCILTCLGKKGRLGEALRTFEEMKK-DAAPNLSTYNVLIDMLCKAGEVEAAFKVR 430

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +       ++   N +ID LCK+ +L+ A  +F  +  ++   D VT+  +I GL   
Sbjct: 431 DAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQ 490

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++D A+ L+  M ++   PN +++ +LI  F +  +     ++  +M  +   PD  ++
Sbjct: 491 GRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLL 550

Query: 370 SMVVD 374
           +  +D
Sbjct: 551 NAYMD 555



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 158/360 (43%), Gaps = 3/360 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
            Y++++  + K    D  + +  +M      P   T   LI     +N   E   L   M
Sbjct: 130 AYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCM 189

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
                +P+   +  ++  L    + D    L   M +     +   ++T++  F   G++
Sbjct: 190 RKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRL 249

Query: 138 NRAEELFGSMESMGCKHDD-VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           + A  L   M+S  C H D V YN+ I+ + K  +V+ A   + E+ S G+ P  VTY +
Sbjct: 250 DAALSLLDEMKS-NCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTS 308

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +   L + ++++ A+++FE+M+++        YNT I G    G   EA  L        
Sbjct: 309 MIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARG 368

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
           C   + AYNC++  L K GRL  AL  F  + +     ++ TYN++I  LC  G+++ A 
Sbjct: 369 CIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAF 427

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +   M+E  + PNV+    +I    +  K  +   +   M  K   PD      ++D L
Sbjct: 428 KVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGL 487



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 54/94 (57%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPNT+TY T+I GL K G + +A +LF + K     PD  +YN++I GL ++    EA +
Sbjct: 789 KPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYK 848

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           +F E   +G      T   ++D L K+  +++A+
Sbjct: 849 IFEETRMKGCNIHTKTCIALLDALQKDECLEQAA 882


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 190/352 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY+ +IDG CK G V +A  L+ ++    + P+VV + +L+ G C A +   A+ L
Sbjct: 267 PNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSL 326

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+  GV P++  +N ++   CK+G M EA  LL  M   ++ P+ FTY+ L++G C+
Sbjct: 327 FVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCI 386

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++  A  LF  M++        +YN LI+GYCK   +E+AL L  EM + G++P ++T
Sbjct: 387 EDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIIT 446

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           ++TL  G   +  ++ A+ L+ EM    +  D  TY   ID   K   + EA+ L+  + 
Sbjct: 447 FSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML 506

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +   + CL+DG  K GRL +A++ ++   ++    + V +  +I GLC +G + 
Sbjct: 507 EAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYIL 566

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A   F DM    + P++  +V+++ G ++  + +  + L   M +  ++P+
Sbjct: 567 RASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 173/320 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V + T++DG CK   +  A++LF+ M    ++P++  YN LIHG C + +  EA  L
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM    + P V T+ ++++ LC   ++ EA+RL   M    + P++ TY++L+ G+C 
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              + +A +L   M + G + + ++++ LI+GYC  ++++ A+ LY EM  KGI P VVT
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVT 481

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L    F+   ++ AL+L+ +M    +  +  T+   +DG  K G +  A++ ++   
Sbjct: 482 YTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENN 541

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +   +   + CLI+GLC++G +  A   F  +    +  D+ +Y  M+ G   + ++ 
Sbjct: 542 QQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRIT 601

Query: 314 KAHDLFLDMEENAVAPNVII 333
               L  DM +  + PN+++
Sbjct: 602 DTMMLQCDMIKTGILPNLLV 621



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 176/348 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   Y  +     K+G   K + L  +M    I P+V  Y   I  LC  N   EA+++
Sbjct: 197 PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKM 256

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   GV P++ T++ ++D  CK G + +A  L   ++  ++ PN   + TL+DGFC 
Sbjct: 257 FELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCK 316

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++  A  LF  M   G   +   YN LI+G+CK+  + EA+ L  EM S  + P V T
Sbjct: 317 ARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFT 376

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL    QV  A +LF++M+ + +   ++TYN+ I G CK   + +A++L   + 
Sbjct: 377 YTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMT 436

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E +I  ++ LIDG C    ++ A+ L+  +  + +V DVVTY  +I     +  M 
Sbjct: 437 ASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMK 496

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +A  L+ DM E  + PN   F  L+ GF +  + S  I+   +  +++
Sbjct: 497 EALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQR 544



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 181/363 (49%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P++    +I++GL +    D     +  M    + PDV  Y  L         +++ +
Sbjct: 160 CSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKE 219

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  EM   G++P+V  + + + +LC++ KM+EA ++ +LM +  V PN +TYS ++DG+
Sbjct: 220 KLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGY 279

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C TG + +A  L+  +       + V +  L++G+CK +E+  A SL+  MV  G+ P +
Sbjct: 280 CKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNL 339

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             YN L  G  +   +  A+ L  EM+  +++ D  TY   I+GLC    + EA  LF+ 
Sbjct: 340 YVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQK 399

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +       YN LI G CK   +E AL+L   +    +  +++T++ +I G CN   
Sbjct: 400 MKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRD 459

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +  A  L+ +M    + P+V+ +  LI    +     + + L   M E  + P+    + 
Sbjct: 460 IKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC 519

Query: 372 VVD 374
           +VD
Sbjct: 520 LVD 522



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 171/345 (49%), Gaps = 3/345 (0%)

Query: 30  GFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTF 89
           G  ++A  +  +MK    +PD     S+++GL     ++     +  M+ +G+ P V  +
Sbjct: 146 GLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIY 202

Query: 90  NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
            V+     K G   +  +LLD M    ++PN + Y+  +   C   K+  AE++F  M+ 
Sbjct: 203 FVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKK 262

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
            G   +  +Y+ +I+GYCK   V +A  LY+E++   + P VV + TL  G  +  ++  
Sbjct: 263 HGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVT 322

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           A  LF  M +  V  +   YN  I G CK+G ++EAV L   +  L    D+  Y  LI+
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           GLC   ++  A  LF+ +    +     TYN +IHG C +  M++A DL  +M  + V P
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP 442

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           N+I F TLI G+  +      + L  +M  K ++PD    + ++D
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID 487



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 118/232 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P++ TYN++I G CKE  +++A  L  +M    + P+++T+++LI G C+  D   A  L
Sbjct: 407 PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGL 466

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           +FEM  +G+ P VVT+  ++D   K   M EA RL   M++  + PN  T++ L+DGF  
Sbjct: 467 YFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWK 526

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A + +          + V +  LI G C+N  +  A   + +M S GI P + +
Sbjct: 527 EGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICS 586

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           Y ++  G  +  ++   + L  +M +  +  +             NGY+  A
Sbjct: 587 YVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 35/153 (22%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +T++T+IDG C    +  A  L+ +M  + I PDVVTY +LI       +  EA R
Sbjct: 441 EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALR 500

Query: 73  LFFEMMDQGVQPSVVTFNVIMDE-----------------------------------LC 97
           L+ +M++ G+ P+  TF  ++D                                    LC
Sbjct: 501 LYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLC 560

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           +NG +  ASR    M    + P+  +Y +++ G
Sbjct: 561 QNGYILRASRFFSDMRSCGITPDICSYVSMLKG 593


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 193/355 (54%), Gaps = 6/355 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   Y  +IDG C+ G +D A  L  +M    +  ++   NSLI+G C   + +EA+ +
Sbjct: 330 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGV 389

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+D  ++P   ++N ++D  C+ G   EA  L D M+Q  + P   TY+TL+ G C 
Sbjct: 390 ITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCR 449

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A +++  M   G   D+V Y+ L++G  K +  E A +L+++++++G   + +T
Sbjct: 450 VGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRIT 509

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +NT+  GL ++ ++  A ++F++M+    + D  TY T IDG CK   + +A   F+  G
Sbjct: 510 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQA---FKVKG 566

Query: 254 ILKCE---LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            ++ E     I+ YN LI GL KS RL    +L   +  R L  ++VTY  +I G C +G
Sbjct: 567 AMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEG 626

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +DKA   + +M EN ++ N+II  T++ G  R+ +  +   L+ KM +    PD
Sbjct: 627 MLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD 681



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 206/466 (44%), Gaps = 102/466 (21%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP++ +YNT++DG C+EG   +A  L  +M  E I P V+TYN+L+ GLC    +++A +
Sbjct: 399 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 458

Query: 73  LFFEMMDQGVQP-----------------------------------SVVTFNVIMDELC 97
           ++  MM +GV P                                   S +TFN ++  LC
Sbjct: 459 IWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLC 518

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES-------- 149
           K GKM EA  + D M      P+  TY TL+DG+C    + +A ++ G+ME         
Sbjct: 519 KMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIE 578

Query: 150 ---------------------------MGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
                                       G   + V+Y  LI+G+CK   +++A S Y EM
Sbjct: 579 MYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEM 638

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM----------------------QRD 220
              G+   ++  +T+  GL+ + +++ A  L ++M                      Q+ 
Sbjct: 639 TENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKI 698

Query: 221 DVAADTS----------TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
             + D S           YN  I GLCK G + +A   F  L +     D   Y  LI G
Sbjct: 699 ADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHG 758

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
              +G ++ A  L   + RR LV ++VTYN +I+GLC    +D+A  LF  + +  + PN
Sbjct: 759 YSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPN 818

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           V+ + TLI G+ +I       +L  KM E+ + P     S +++ L
Sbjct: 819 VVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 171/318 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N    N++I+G CK G + +A+ +  +M   N+ PD  +YN+L+ G C     +EA  
Sbjct: 364 KTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFN 423

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ +G++P+V+T+N ++  LC+ G  D+A ++  LM++R V P+   YSTL+DG  
Sbjct: 424 LCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLF 483

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                  A  L+  + + G     +++N +I+G CK  ++ EA  ++ +M   G  P  +
Sbjct: 484 KMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGI 543

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  G  +   V  A K+   M+R+ ++     YN+ I GL K+  +VE  +L   +
Sbjct: 544 TYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEM 603

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           GI     +I  Y  LIDG CK G L+ A   +  +    L A+++  + M+ GL   G++
Sbjct: 604 GIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRI 663

Query: 313 DKAHDLFLDMEENAVAPN 330
           D+A+ L   M ++   P+
Sbjct: 664 DEANLLMQKMVDHGFFPD 681



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 186/396 (46%), Gaps = 33/396 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY T+IDG CK   V +A  +   M+ E I+P +  YNSLI GL  +    E  
Sbjct: 538 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVT 597

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM  +G+ P++VT+  ++D  CK G +D+A      M +  +  N    ST++ G 
Sbjct: 598 DLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGL 657

Query: 132 CLTGKINRAEELFGSMESMG----------------------------CK----HDDVSY 159
              G+I+ A  L   M   G                            CK     +++ Y
Sbjct: 658 YRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVY 717

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           NI I G CK  +V++A   +  +  KG  P   TY TL  G      V+ A +L +EM R
Sbjct: 718 NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLR 777

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
             +  +  TYN  I+GLCK+  +  A  LF  L       ++  YN LIDG CK G ++ 
Sbjct: 778 RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDA 837

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A +L   +    +   VVTY+ +I+GLC  G ++++  L   M +  V   +I + TL+ 
Sbjct: 838 AFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQ 897

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
           G++R  +  K I  L+ M   + +   +I    VDL
Sbjct: 898 GYIRSGEMQK-IHKLYDMMHIRCLSTTAISHKQVDL 932



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 165/331 (49%), Gaps = 1/331 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +   ++ I+    ++G    A  +F  M      P + + NSL++ L    + + A  ++
Sbjct: 155 SPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVY 214

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M+  G+ P V   +++++  CK+GK+DEA+  +  M    V PN  TY +L++G+   
Sbjct: 215 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSL 274

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVT 193
           G +  A+ +   M   G   + V+Y +LI GYCK  +++EA  + R M  +  + P    
Sbjct: 275 GDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERA 334

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G     +++ A++L +EM R  +  +    N+ I+G CK G I EA  +   + 
Sbjct: 335 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 394

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D  +YN L+DG C+ G    A  L   + +  +   V+TYN ++ GLC  G  D
Sbjct: 395 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 454

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
            A  ++  M +  VAP+ + + TL+ G  ++
Sbjct: 455 DALQIWHLMMKRGVAPDEVGYSTLLDGLFKM 485



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 153/305 (50%), Gaps = 1/305 (0%)

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  M   G  PS+ + N +++ L KNG+   A  +   M++  + P+ F  S +++ FC
Sbjct: 178 VFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFC 237

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK++ A      ME++G + + V+Y+ LINGY    +VE A  + + M  KG+   VV
Sbjct: 238 KDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVV 297

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDD-VAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           TY  L  G  +  +++ A K+   MQ +  +  D   Y   IDG C+ G I +AV L   
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  L  + ++   N LI+G CK G +  A  +   +    L  D  +YN ++ G C +G 
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
             +A +L   M +  + P V+ + TL+ G  R+      +++ H M ++ V PD    S 
Sbjct: 418 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 477

Query: 372 VVDLL 376
           ++D L
Sbjct: 478 LLDGL 482


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 195/368 (52%), Gaps = 2/368 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+G V  P     +++++GL ++G V  A  L  ++K     P +  YN+LI+ LC    
Sbjct: 324 ELGFV--PTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGK 381

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           ++EA+ LF EM ++G+  + VT+++++D  C+ GK+D A   L  M+   ++   + Y++
Sbjct: 382 FDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNS 441

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L++G C  G ++ A   F  M   G K   VSY  LI+GYC   ++ EA  LY EM  KG
Sbjct: 442 LINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKG 501

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I P   T+ TL   LF  +++  A +LF+EM   ++  +  TYN  I+G CK G  V+A 
Sbjct: 502 IAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAF 561

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           EL   +       D   Y  LI  LC +GR+  A +    L R     + + Y+ ++HG 
Sbjct: 562 ELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGY 621

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C +G++  A  +  +M +  V  +++ +  LI G ++    S V  LL  M ++++ PD 
Sbjct: 622 CKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDK 681

Query: 367 SIVSMVVD 374
            I + ++D
Sbjct: 682 VIYTSMID 689



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 194/388 (50%), Gaps = 34/388 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  V+Y ++I G C +G + +A  L+ +M G+ I P+  T+ +LI  L  AN   +A R
Sbjct: 468 KPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFR 527

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM++Q + P+ VT+NV+++  CK G   +A  LL+ MVQ+ + P+ +TY  L+   C
Sbjct: 528 LFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLC 587

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            TG++  A++    +     K +++ Y+ L++GYCK   + +AL + REMV +G+   +V
Sbjct: 588 STGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLV 647

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y  L  G  +         L + M    +  D   Y + IDG  K G + +A  ++  +
Sbjct: 648 CYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIM 707

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFR------SLPRRV--------------- 291
               C  +I  Y  LI+ LCK+G ++ A  L++      S P  V               
Sbjct: 708 IDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSM 767

Query: 292 -------------LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
                        L+A+ V+YNI++ G C  G++++A  L  +M +NA+ P+ I + T+I
Sbjct: 768 EKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTII 827

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +   R       IE    M  K + PD 
Sbjct: 828 YQCCRRGNLDGAIEFWDTMLNKGLKPDT 855



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 172/351 (49%), Gaps = 3/351 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE G+    N VTY+ +ID  C+ G +D A     +M    I   V  YNSLI+G C   
Sbjct: 393 GEKGLC--ANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLG 450

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
           + + A   F EM+D+G++P+VV++  ++   C  GK+ EA RL   M  + + PN +T++
Sbjct: 451 NLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFT 510

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+       ++  A  LF  M       ++V+YN++I G+CK     +A  L  +MV K
Sbjct: 511 TLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQK 570

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G+ P   TY  L   L    +V  A K  +++ R+    +   Y+  + G CK G + +A
Sbjct: 571 GLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDA 630

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           + + R +     ++D+  Y  LIDG  K         L +++  + L  D V Y  MI G
Sbjct: 631 LGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDG 690

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
               G + KA  ++  M +    PN++ + TLI+   +     K  ELL K
Sbjct: 691 YSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKA-ELLWK 740



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 178/363 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   YN +I+ LCK+G  D+A+ LF +M  + +  + VTY+ LI   C     + A   
Sbjct: 364 PSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHF 423

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+  G++ +V  +N +++  CK G +  A    D M+ + ++P   +Y++L+ G+C 
Sbjct: 424 LGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCN 483

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A  L+  M   G   +  ++  LI+   +   + +A  L+ EM+ + + P  VT
Sbjct: 484 KGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVT 543

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  G  +      A +L  +M +  +  DT TY   I  LC  G + EA +    L 
Sbjct: 544 YNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLH 603

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +L+   Y+ L+ G CK GRL  AL + R + +R +  D+V Y ++I G   +    
Sbjct: 604 REHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTS 663

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
               L  +M +  + P+ +I+ ++I G+ +     K   +   M ++   P+    + ++
Sbjct: 664 AVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLI 723

Query: 374 DLL 376
           + L
Sbjct: 724 NEL 726



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 176/361 (48%), Gaps = 2/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   T   +++GL K   VD    LF ++    I PD+  Y ++I   C   ++ +AK +
Sbjct: 191 PQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEM 250

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +    +VV +NV++  LCKN ++ EA  + + ++Q+ +  +  TY TL+ G C 
Sbjct: 251 IQRM--ESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCK 308

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +      +   M  +G    + + + L+ G  +  +V +A  L   +   G  P++  
Sbjct: 309 VQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFV 368

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L   L +  + + A  LF+EM    + A+  TY+  ID  C+ G +  A+     + 
Sbjct: 369 YNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMI 428

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   ++ +  YN LI+G CK G L  A+  F  +  + L   VV+Y  +I G CN G++ 
Sbjct: 429 MAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLH 488

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  L+ +M    +APN   F TLI    R N+ +    L  +M E+ +MP+    ++++
Sbjct: 489 EAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMI 548

Query: 374 D 374
           +
Sbjct: 549 E 549



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 36/365 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTYN +I+G CKEG   KA  L  QM  + + PD  TY  LI  LC      EAK+ 
Sbjct: 539 PNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKF 598

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV---------------- 117
             ++  +  + + + ++ ++   CK G++ +A  +   MV+R V                
Sbjct: 599 IDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIK 658

Query: 118 -------------------RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
                              RP+   Y++++DG+   G + +A  ++  M   GC  + V+
Sbjct: 659 EQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVT 718

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y  LIN  CK   +++A  L++EM+     P  VTY      L     +E A++L  +M 
Sbjct: 719 YTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML 778

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
           +  + A+T +YN  + G CK G + EA +L   +       D   Y+ +I   C+ G L+
Sbjct: 779 KG-LLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLD 837

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A+E + ++  + L  D + YN +I+G C  G++ KA +L  DM    V PN     +L 
Sbjct: 838 GAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLS 897

Query: 339 HGFVR 343
           HG  R
Sbjct: 898 HGASR 902



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 149/293 (50%), Gaps = 1/293 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N + Y+ ++ G CKEG +  A  +  +M    ++ D+V Y  LI G     D +    
Sbjct: 608 KLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFG 667

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M DQ ++P  V +  ++D   K G + +A  + D+M+     PN  TY+TL++  C
Sbjct: 668 LLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELC 727

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +++AE L+  M       + V+Y   ++   +   +E+A+ L+ +M+ KG+    V
Sbjct: 728 KAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTV 786

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YN L  G  ++ +VE A KL +EM  + +  D  TY+T I   C+ G +  A+E + T+
Sbjct: 787 SYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTM 846

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
                + D  AYN LI G C +G L  A EL   + RR +  +  T+  + HG
Sbjct: 847 LNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHG 899



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 112/189 (59%), Gaps = 1/189 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY T+I+ LCK G +DKA+ L+ +M   N  P+ VTY   +  L       +A 
Sbjct: 712 CTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAV 771

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  +M+ +G+  + V++N+++   CK G+++EA++LLD M+   + P+  TYST++   
Sbjct: 772 QLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQC 830

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G ++ A E + +M + G K D ++YN LI G C   E+ +A  L  +M+ +G+KP  
Sbjct: 831 CRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQ 890

Query: 192 VTYNTLFLG 200
            T+ +L  G
Sbjct: 891 ATHKSLSHG 899



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 166/371 (44%), Gaps = 51/371 (13%)

Query: 45  ENINPDVVTYNSLIHGLCHAN-DWNEAKRLFFEMMDQGVQP-----------------SV 86
           +N N   +++  LIH L +AN  W  +  L   ++  G+ P                 S 
Sbjct: 99  KNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALLDCFEKCDFISS 158

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
           + F++++    +  +M ++  +  LM Q ++ P   T   +++G     +++    LFG 
Sbjct: 159 LGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGE 218

Query: 147 MESMGCKHDD---------------------------------VSYNILINGYCKNKEVE 173
           + SMG + D                                  V YN+LI+G CKNK V 
Sbjct: 219 ILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVVVYNVLIHGLCKNKRVW 278

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           EA+ +   ++ KG+  + VTY TL LGL ++ + E    + +EM         +  ++ +
Sbjct: 279 EAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLV 338

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
           +GL + G +V+A +L   +  +     +  YN LI+ LCK G+ + A  LF+ +  + L 
Sbjct: 339 EGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLC 398

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
           A+ VTY+I+I   C  G++D A      M    +   V  + +LI+G  ++   S  +  
Sbjct: 399 ANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSF 458

Query: 354 LHKMKEKKVMP 364
             +M +K + P
Sbjct: 459 FDEMIDKGLKP 469



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 137/308 (44%), Gaps = 20/308 (6%)

Query: 70  AKRLF-FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           A R F F  + +    S ++F +++  L        AS LL  ++ R        +  L+
Sbjct: 88  ALRFFNFLGLHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALL 147

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           D F          E    + S+G       +++LI  Y + K + +++ ++R M    + 
Sbjct: 148 DCF----------EKCDFISSLG-------FDLLIQSYVQEKRMFDSVLIFRLMRQCELM 190

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P V T   +  GL +I +V+  L LF E+    +  D   Y   I   C+     +A E+
Sbjct: 191 PQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEM 250

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            + +     +L++  YN LI GLCK+ R+  A+E+   L ++ L A  VTY  ++ GLC 
Sbjct: 251 IQRME--SSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCK 308

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
             + +    +  +M E    P      +L+ G  R  K     +L++++K+   MP   +
Sbjct: 309 VQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFV 368

Query: 369 VSMVVDLL 376
            + +++ L
Sbjct: 369 YNALINSL 376


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 186/352 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+   Y TIIDG+CKEG  + A  +  +M    + P+VV YN+++ G+C A+ W +A+
Sbjct: 262 CTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAE 321

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM  +      VTFN+++D  C+NG +D    LL+ M++    P+  TY+T+++GF
Sbjct: 322 ELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGF 381

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I+ A  L  +M S GCK + +SY I++ G C  +   +A  L   M+ +G  P  
Sbjct: 382 CKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNP 441

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NT+   L +   VE A++L ++M  +    D  +Y+T IDGL K G   EA+EL   
Sbjct: 442 VTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNV 501

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       ++  Y+ +   L + GR++  +++F ++    + +D V YN +I  LC   +
Sbjct: 502 MINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRE 561

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            D A D    M  N   PN   +  LI G        +  +LL ++  ++ +
Sbjct: 562 TDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSRRAV 613



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 190/372 (51%), Gaps = 10/372 (2%)

Query: 12  CKPNTVTYNTIIDGLCK-------EGFVD---KAKALFLQMKGENINPDVVTYNSLIHGL 61
           C+ + V+YN ++ GLC        E  +D   K      QM      PD+  Y ++I G+
Sbjct: 217 CEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGI 276

Query: 62  CHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNA 121
           C       A  +   M   G++P+VV +N ++  +C   + ++A  LL  M Q++   + 
Sbjct: 277 CKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDD 336

Query: 122 FTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 181
            T++ L+D FC  G ++R  EL   M   GC  D ++Y  +ING+CK   ++EA+ L + 
Sbjct: 337 VTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKN 396

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M S G KP  ++Y  +  GL    +   A +L   M +     +  T+NT I+ LCK G 
Sbjct: 397 MPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGL 456

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           + +A+EL + + +  C  D+ +Y+ +IDGL K+G+ E ALEL   +  + +  +V+TY+ 
Sbjct: 457 VEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSS 516

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           M   L  +G++DK   +F ++++  +  + +++  +I    +  +    I+ L  M    
Sbjct: 517 MAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNG 576

Query: 362 VMPDASIVSMVV 373
            MP+ S  + ++
Sbjct: 577 CMPNESTYTALI 588



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 171/378 (45%), Gaps = 10/378 (2%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
            V   PN  TY  ++ GLC  G +  A A+  +M   +  P    Y+ +I   C +  ++
Sbjct: 109 AVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYS 168

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A R+   +  +G        N++++ +C  G +DE   +L  +       +  +Y+ ++
Sbjct: 169 SALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVL 228

Query: 129 DGFCLTGKINRAEEL----------FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
            G C   +    EEL             M   GC  D   Y  +I+G CK    E A  +
Sbjct: 229 KGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEI 288

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
              M S G+KP VV YNT+  G+    + E A +L  EM + +   D  T+N  +D  C+
Sbjct: 289 LSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQ 348

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           NG +   +EL   +    C  D+  Y  +I+G CK G ++ A+ L +++P      + ++
Sbjct: 349 NGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTIS 408

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y I++ GLC+  +   A +L   M +    PN + F T+I+   +     + IELL +M 
Sbjct: 409 YTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQML 468

Query: 359 EKKVMPDASIVSMVVDLL 376
                PD    S V+D L
Sbjct: 469 VNGCNPDLISYSTVIDGL 486



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 163/357 (45%), Gaps = 18/357 (5%)

Query: 20  NTIIDGLCKEG-FVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           + +I  LC  G   D  +AL            VV YN+++ G C       A+RL   + 
Sbjct: 56  SALIRSLCVAGRTADAVRALDAAGNAAG----VVDYNAMVAGYCRVGQVEAARRLAAAV- 110

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
              V P+  T+  ++  LC  G++ +A  +LD M  R   P    Y  +++  C +G  +
Sbjct: 111 --PVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYS 168

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A  +  ++ + G   D  + N++IN  C    V+E L + R++   G +  +V+YN + 
Sbjct: 169 SALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVL 228

Query: 199 LGLFEIHQVEHALKLFEE----------MQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
            GL    +     +L +E          M +     D   Y T IDG+CK G+   A E+
Sbjct: 229 KGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEI 288

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +     + ++  YN ++ G+C + R E A EL   + ++    D VT+NI++   C 
Sbjct: 289 LSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQ 348

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +G +D+  +L   M E+   P+VI + T+I+GF +     + + LL  M      P+
Sbjct: 349 NGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPN 405



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 135/331 (40%), Gaps = 51/331 (15%)

Query: 89  FNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSME 148
            + ++  LC  G+  +A R LD             Y+ ++ G+C  G++  A  L  ++ 
Sbjct: 55  LSALIRSLCVAGRTADAVRALDAAGNAA---GVVDYNAMVAGYCRVGQVEAARRLAAAVP 111

Query: 149 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 208
                 +  +Y  ++ G C    + +AL++  EM S+   P    Y+ +           
Sbjct: 112 V---PPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYS 168

Query: 209 HALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC-- 266
            AL++ E +       DT   N  I+ +C  G + E +E+ R L +  CE DI +YN   
Sbjct: 169 SALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVL 228

Query: 267 -------------------------------------------LIDGLCKSGRLEIALEL 283
                                                      +IDG+CK G  E+A E+
Sbjct: 229 KGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEI 288

Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
              +P   L  +VV YN ++ G+C+  + +KA +L  +M +     + + F  L+  F +
Sbjct: 289 LSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQ 348

Query: 344 INKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
                +VIELL +M E   MPD    + V++
Sbjct: 349 NGLVDRVIELLEQMLEHGCMPDVITYTTVIN 379


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 118/354 (33%), Positives = 190/354 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYN +I+GL K+G  ++AK L  +M    +     TYN LI+G  +     EA 
Sbjct: 265 CAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEAL 324

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+ +G  P+V T+N  +  LCK G+M +A + L  M+  ++ P+  +Y+TL+ G+
Sbjct: 325 SLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGY 384

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + +A  LF  + S+      V+YN L++G C+  E+E A  L  EM+++GI P +
Sbjct: 385 CRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDI 444

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY  L  G  ++  +  A + F+EM  + +  D+  Y T I G  K G    A  L   
Sbjct: 445 VTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEE 504

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D+  YN ++DGLCK G LE A EL + +    ++ D VTY  +IH    +G+
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR 564

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + K  ++F +M    + P+V+ +  LIHG     +  +      +M+EK ++P+
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPN 618



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 191/365 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
             P   TYN+ I GLCK G +  A      M   N+ PDVV+YN+LI+G C   +  +A 
Sbjct: 335 ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAF 394

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF E+    + P++VT+N ++D LC+ G+++ A +L   M+   + P+  TY+ L++G 
Sbjct: 395 LLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGS 454

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G ++ A+E F  M   G + D  +Y   I G  K  +   A SL  EM++KG  P +
Sbjct: 455 CKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDL 514

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           + YN +  GL ++  +E A +L ++M  D V  D  TY + I    +NG + +  E+F  
Sbjct: 515 IIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYE 574

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +        +  Y  LI G    GRLE A   F  +  + ++ +V+TYN +I+GLC   +
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRR 634

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           MD+A++ F +M E  + PN   +  LI+    +    + + L  +M ++ V PD+   S 
Sbjct: 635 MDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSA 694

Query: 372 VVDLL 376
           ++  L
Sbjct: 695 LLKQL 699



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/349 (32%), Positives = 188/349 (53%)

Query: 28  KEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVV 87
           K+  V++  ++F +M    ++PDV   N ++  L   +  ++A  ++  M + G++P++V
Sbjct: 176 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235

Query: 88  TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
           T+N ++D  CK GK+ +   LL  M +R   PN  TY+ L++G    G+  +A+ L G M
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
              G K    +YN LI GY     + EALSL  EMV KG  PTV TYN+   GL ++ ++
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
             A++   +M  +++  D  +YNT I G C+ G +++A  LF  L  +     I  YN L
Sbjct: 356 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 415

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           +DGLC+ G LE+A +L   +    +  D+VTY I+++G C  G +  A + F +M    +
Sbjct: 416 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +   + T I G +++   S+   L  +M  K   PD  I ++VVD L
Sbjct: 476 ELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGL 524



 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 151/300 (50%), Gaps = 35/300 (11%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTYNT++DGLC++G ++ A+ L ++M  E I PD+VTY  L++G C     + A+  
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEF 466

Query: 74  FFEMMDQGVQ-----------------------------------PSVVTFNVIMDELCK 98
           F EM+ +G++                                   P ++ +NV++D LCK
Sbjct: 467 FDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCK 526

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
            G ++EAS LL  MV   V P+  TY++++      G++ +  E+F  M S G     V+
Sbjct: 527 LGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVT 586

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y +LI+G+     +E A   + EM  KGI P V+TYN+L  GL ++ +++ A   F EM 
Sbjct: 587 YTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMV 646

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  +  +Y   I+  C  G   EA+ L++ +     + D   ++ L+  L K  +L+
Sbjct: 647 EKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQ 706



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 3/218 (1%)

Query: 151 GCKHDDVSYNIL---INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
           GC   +VS  IL   I  Y K   VE+ LS++ +M+   + P V   N +   L +   +
Sbjct: 156 GCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLM 215

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
             A++++  M    +     TYNT +D  CK G + + ++L   +    C  +   YN L
Sbjct: 216 SKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVL 275

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           I+GL K G  E A  L   + +  L     TYN +I+G  N G + +A  L  +M     
Sbjct: 276 INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGA 335

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +P V  + + I+G  ++ + S  ++ L  M    ++PD
Sbjct: 336 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPD 373


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 197/438 (44%), Gaps = 74/438 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ +T+  +IDGLCK G  ++A   F +M      P+VVTY ++I GL        A R
Sbjct: 362 RPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFR 421

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M+  G  P  VT+  ++D  CK G++DEA++LLD + +    PN   YS+L++G C
Sbjct: 422 IMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLC 481

Query: 133 ------------------------------------LTGKINRAEELFGSMESMGCKHDD 156
                                                TG+++ A  +F  M S GCK D 
Sbjct: 482 DGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDA 541

Query: 157 VSYNILINGYCKNKE--VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
            +YNILING C+++E  VE A +L  ++   G  P  VTY  L +GL +I +V+ A+K+ 
Sbjct: 542 TTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKML 601

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL--- 271
           EE       AD   Y     GLC  G +  AV LF+ +       D  AY C+I+GL   
Sbjct: 602 EEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKV 661

Query: 272 --------------------------------CKSGRLEIALELFRS-LPRRVLVADVVT 298
                                           C +G ++ A   F S L R  LV  V+ 
Sbjct: 662 KKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMI 721

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y+ +IHG C   ++D A  LF DM      P  +   +L  G VR  K  K  ELL +M 
Sbjct: 722 YDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMA 781

Query: 359 EKKVMPDASIVSMVVDLL 376
                P A+  + ++D L
Sbjct: 782 AGGSPPHAATFTAILDGL 799



 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 190/367 (51%), Gaps = 2/367 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN-INPDVVTYNSLIHGLCHANDWNEA 70
           CKP+  T+  ++D LCK G  +KA  +F +M     + PD   + +++  L  A    EA
Sbjct: 185 CKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEA 244

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           + +F +M   G  P  + +N ++D L K G   EA ++LD M+ +   P   TY  L++ 
Sbjct: 245 REVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNS 304

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  G + RAEELF  M + G + + V Y  LI+G+ K+  ++EA SL+ EMV  G +P 
Sbjct: 305 LCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPD 364

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V+T+  +  GL +    E A K FEEM R     +  TY T I GL K G +  A  + +
Sbjct: 365 VITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMK 424

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C  D   Y CL+DG CK GRL+ A +L   L +     ++  Y+ +++GLC+ G
Sbjct: 425 GMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGG 484

Query: 311 QMDKA-HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            ++K   DLF   +  A   +  +  ++I G  +  +  +   +  +M  +   PDA+  
Sbjct: 485 SVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTY 544

Query: 370 SMVVDLL 376
           +++++ L
Sbjct: 545 NILINGL 551



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 184/350 (52%), Gaps = 10/350 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKA-KALFLQMKG--ENINPDVVTYNSLIHGLCHANDWNEA 70
           PN   Y+++++GLC  G V+K    LF Q K   E ++P +    S+I GLC     +EA
Sbjct: 468 PNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCC--SIIVGLCKTGRLDEA 525

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKN--GKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            R+F  M+ +G +P   T+N++++ LC++   +++ A  LL  + +    P+A TY+ L 
Sbjct: 526 CRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLC 585

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C  G+++RA ++     S G   D V+Y  L  G C   +V+ A+SL++EMV +G  
Sbjct: 586 IGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGA 645

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P    Y  +  GL ++ ++E A K F+EM         +TY   +  LC  G + EA   
Sbjct: 646 PDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHR 705

Query: 249 FRTLGILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           F ++ + + EL   +  Y+ LI G CK+ +++ AL+LF  +  R  V   VT   +  GL
Sbjct: 706 FESM-LARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGL 764

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
              G+ +KA +L  +M      P+   F  ++ G  + ++  K+++L+ +
Sbjct: 765 VRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 158/331 (47%), Gaps = 3/331 (0%)

Query: 39  FLQMKGEN--INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
           F +  GE      DV TYN L++ L    ++++   +  EM+  G+ P+  +FN+++   
Sbjct: 105 FFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSF 164

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG-CKHD 155
            +  + D+A    ++M ++  +P+  T+  L+D  C  G   +A E+F  M +MG    D
Sbjct: 165 ARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPD 224

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
              +  ++    K K V+EA  ++ +M   G  P  + YNT+  GL +    + ALK+ +
Sbjct: 225 RALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLD 284

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
            M          TY   ++ LCK G +  A ELFR +       +   Y  LI G  KSG
Sbjct: 285 NMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSG 344

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           R++ A  LF  +       DV+T+ +MI GLC  G  ++A   F +M      PNV+ + 
Sbjct: 345 RMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYT 404

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           T+I G  +I + +    ++  M      PD+
Sbjct: 405 TIIQGLSKIGRVANAFRIMKGMIAHGCFPDS 435



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 2/204 (0%)

Query: 175 ALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           A+S +R    + G +  V TYN L   L           + EEM +  +A +T ++N  I
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILI 161

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
               +     +AV  F  +   +C+ D+  +  L+D LCK+G  E A E+F  +     V
Sbjct: 162 RSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFV 221

Query: 294 A-DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
             D   +  M+  L    ++ +A ++F  ME+    P+ I + T+I G  +     + ++
Sbjct: 222 PPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALK 281

Query: 353 LLHKMKEKKVMPDASIVSMVVDLL 376
           +L  M  K  +P      ++V+ L
Sbjct: 282 VLDNMLAKACVPTEVTYGILVNSL 305


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 204/403 (50%), Gaps = 37/403 (9%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+G V  PN V YNT+IDG CK G + +A  +   M  + I+P+ VT NSLI G C ++ 
Sbjct: 354 ELGFV--PNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQ 411

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A+ +  EM+ +G+  +  +F+++++ LC   +   A   +  M+ R++RPN    +T
Sbjct: 412 IGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTT 471

Query: 127 LMDGFCLTGKINRAEELF-------------------------GSMESM----------G 151
           L+ G C  GK   A EL+                         G+M+            G
Sbjct: 472 LVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERG 531

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
              D ++YN LI+G CK  +V+E   L  EMV KGI+P + T+N L  GL    +++ A 
Sbjct: 532 LVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEAS 591

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           +L+ E +++    +  TY   IDG CK   + E   L   L   K EL+   YN LI   
Sbjct: 592 RLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAY 651

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C +G +  A  L   +  R ++    TY+ ++HGLCN G +D A  L  +M +  + PNV
Sbjct: 652 CINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNV 711

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + + T+I G+ ++ + +KV  +L +M    + P+    ++++D
Sbjct: 712 VCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMID 754



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 190/349 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTYN II GLCK G +D+A     +M  E ++P ++TY+  I+GL      +EA  +
Sbjct: 289 PNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCV 348

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM + G  P+ V +N ++D  CK G + EA ++ D M+ + + PN+ T ++L+ GFC 
Sbjct: 349 LKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCK 408

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           + +I +AE +   M   G   +  S++++IN  C       AL   REM+ + ++P    
Sbjct: 409 SDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGL 468

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
             TL  GL +  +   A++L+  +       +  T N  I GLCK G + E ++L R + 
Sbjct: 469 LTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDML 528

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D   YN LI G CK G+++   EL   + ++ +  D+ T+N+++HGLCN  ++D
Sbjct: 529 ERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKID 588

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           +A  L+ + ++N   PNV  +  +I G+ + NK  +   LL+++  KK+
Sbjct: 589 EASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKL 637



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 197/396 (49%), Gaps = 35/396 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T   ++  L K   + K+  ++  +    I PDV  ++++I+  C  +  ++A  L
Sbjct: 219 PSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGL 278

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M   GV P+VVT+N I+  LCK+G++DEA R  + MV+  V P+  TYS  ++G   
Sbjct: 279 FSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIK 338

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             KI+ A  +   M  +G   ++V YN LI+GYCK   + EAL +  +M+SKGI P  VT
Sbjct: 339 LEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVT 398

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN----------------------- 230
            N+L  G  +  Q+  A  + EEM    +  +  +++                       
Sbjct: 399 LNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREML 458

Query: 231 ------------TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                       T + GLCK G   EAVEL+  L       +I   N LI GLCK+G ++
Sbjct: 459 LRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQ 518

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
             L+L R +  R LV D +TYN +I G C +G++ +  +L  +M +  + P++  F  L+
Sbjct: 519 ETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLL 578

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           HG    +K  +   L H+ K+   +P+     +++D
Sbjct: 579 HGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMID 614



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/327 (33%), Positives = 169/327 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VT N +I GLCK G + +   L   M    +  D +TYN+LI G C      E   L
Sbjct: 499 PNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFEL 558

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+ +G+QP + TFN+++  LC   K+DEASRL     +    PN +TY  ++DG+C 
Sbjct: 559 KEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCK 618

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+   E L   + S   + + V YN LI  YC N  +  A  L  +M S+G+  +  T
Sbjct: 619 ANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCAT 678

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y++L  GL  I  V+ A  L +EM+++ +  +   Y T I G  K G + +   + + + 
Sbjct: 679 YSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMS 738

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +   Y  +IDG CK G+ + A +L   +  + ++ D VTYN   +GLC +G+++
Sbjct: 739 SHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVE 798

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHG 340
           +A  +  +M   AV  + I + TLI G
Sbjct: 799 EAFKVCDEMSSGAVCLDEITYTTLIDG 825



 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 167/366 (45%), Gaps = 35/366 (9%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
           A  +F  +  + + P + T   L+  L  AN+  ++  ++  +   G+ P V  F+ +++
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
             CK  + D+A  L   M +  V PN  TY+ ++ G C +G+++ A      M       
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
             ++Y++ ING  K ++++EA  + +EM   G  P  V YNTL  G  ++  +  ALK+ 
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYI-------------------------------- 242
           ++M    ++ ++ T N+ I G CK+  I                                
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLK 444

Query: 243 ---VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
              V A+   R + +     +      L+ GLCK+G+   A+EL+  L  +  V ++VT 
Sbjct: 445 FRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTS 504

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           N +IHGLC  G M +   L  DM E  +  + I + TLI G  +  K  +  EL  +M +
Sbjct: 505 NALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVK 564

Query: 360 KKVMPD 365
           K + PD
Sbjct: 565 KGIQPD 570



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 115/237 (48%)

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A ++F  +   G      +   L++   K  E++++  +Y  +   GI P V  ++T+  
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
              + H+ + A+ LF +M++  VA +  TYN  I GLCK+G + EA      +   K   
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
            +  Y+  I+GL K  +++ A  + + +     V + V YN +I G C  G + +A  + 
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            DM    ++PN +   +LI GF + ++  +   +L +M  + +  +    SMV++ L
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWL 441


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 114/336 (33%), Positives = 180/336 (53%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G  GV   PN +T+N +I  +CK G VD A  +F  M      PDV TY +L+ GLC A+
Sbjct: 189 GAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKAD 248

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             +EA  L  EM   G  PS VTFNV+++ LCK G +  A++L+D M  +   PN  TY+
Sbjct: 249 RIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYN 308

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+ G CL GK+ +A  L   M S  C  + V+Y  +ING  K     +   +   M  +
Sbjct: 309 TLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEER 368

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G       Y+TL  GLF+  + + A+ LF+EM       +T  Y+  IDGLC++G   +A
Sbjct: 369 GYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDA 428

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           VE+   +    C  +    + L+ G  ++G    A+E+++ + +     + V Y+++IHG
Sbjct: 429 VEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHG 488

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           LC DG++ +A  ++  M      P+V+ + ++I+G 
Sbjct: 489 LCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGL 524



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 205/377 (54%), Gaps = 16/377 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT+N +I+GLCK+G + +A  L   M  +   P+ VTYN+LIHGLC      +A 
Sbjct: 265 CFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAI 324

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M+     P+VVT+  I++ L K G+  + + +L LM +R    N + YSTL+ G 
Sbjct: 325 SLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGL 384

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GK   A  LF  M   G + + + Y+ +I+G C++ + ++A+ +  EM +KG  P  
Sbjct: 385 FKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNA 444

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T ++L  G FE      A++++++M + +   +   Y+  I GLCK+G + EA+ ++  
Sbjct: 445 YTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQ 504

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL----PRRVLVADVVTYNIMIHGLC 307
           +    C+ D+ AY+ +I+GL  +G +E A++L+  +    P      DVVTYNI+++ LC
Sbjct: 505 MLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQ--PDVVTYNILLNTLC 562

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVI---IFVTLIHGFVRINKPSKVIELLHK-----MKE 359
               + +A DL   M +    P+++   IF+ ++    +++ P    E L +     +K 
Sbjct: 563 KQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLRE--KLDPPQDGREFLDELVVRLLKR 620

Query: 360 KKVMPDASIVSMVVDLL 376
           ++V+  + IV +++  L
Sbjct: 621 QRVLGASKIVEVMLQKL 637



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 195/368 (52%), Gaps = 3/368 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALF---LQMKGENINPDVVTYNSLIHGLCHANDWN 68
           CK    ++N++++ + +EG   +A   +   +  KG +I+P+V+T+N +I  +C     +
Sbjct: 157 CKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVD 216

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A ++F +M  +  +P V T+  +MD LCK  ++DEA  LLD M      P+  T++ L+
Sbjct: 217 DAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLI 276

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +G C  G ++RA +L  +M   GC  ++V+YN LI+G C   ++E+A+SL   MVS    
Sbjct: 277 NGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCV 336

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTY T+  GL +  +      +   M+      +   Y+T I GL K G   EA+ L
Sbjct: 337 PNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHL 396

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F+ + +   EL+   Y+ +IDGLC+ G+ + A+E+   +  +    +  T + ++ G   
Sbjct: 397 FKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFE 456

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G   +A +++ DM ++    N + +  LIHG  +  K  + + +  +M  K   PD   
Sbjct: 457 AGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVA 516

Query: 369 VSMVVDLL 376
            S +++ L
Sbjct: 517 YSSMINGL 524



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 111/229 (48%), Gaps = 16/229 (6%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T ++++ G  + G   +A  ++  M   N   + V Y+ LIHGLC      EA 
Sbjct: 440 CTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAM 499

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR--DVRPNAFTYSTLMD 129
            ++ +M+ +G +P VV ++ +++ L   G +++A +L + M+ +  D +P+  TY+ L++
Sbjct: 500 MVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLN 559

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             C    I+RA +L  SM   GC  D V+  I +      +E  +     RE +      
Sbjct: 560 TLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRML---REKLDPPQDGREFL------ 610

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
                + L + L +  +V  A K+ E M +  +    ST+   ++ LCK
Sbjct: 611 -----DELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCK 654


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 184/352 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+   Y TIIDG+CKEG +  A  +  +M    + P+VV YN+L+ GLC A  W E +
Sbjct: 293 CTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETE 352

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM D+      VTFN+++D  C+NG +D    LL+ M+     P+  TY+T+++GF
Sbjct: 353 ELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGF 412

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I+ A  L  SM + GCK + +SY I++ G C  +   +A  L  +M+ +G     
Sbjct: 413 CKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNP 472

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +T+NTL   L +   VE A++L ++M  +  + D  +Y+T IDGL K G   EA+EL   
Sbjct: 473 ITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNV 532

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       +   Y+ +   L + GR+   +++F ++    + +D V YN +I  LC  G+
Sbjct: 533 MVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGE 592

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            ++A +    M  +   PN   +  LI G        +  E+L ++  K  +
Sbjct: 593 TERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 191/366 (52%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + + C PN VT+NT+I  LC+ G  ++   +  QM      PD+  Y ++I G+C     
Sbjct: 254 VRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHL 313

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A  +   M   G++P+VV +N ++  LC   + +E   LL  M  +D   +  T++ L
Sbjct: 314 KVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNIL 373

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D FC  G ++R  EL   M   GC  D ++Y  +ING+CK   ++EA+ L + M + G 
Sbjct: 374 VDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGC 433

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP  ++Y  +  GL    +   A  L  +M +     +  T+NT I+ LCK G + +A+E
Sbjct: 434 KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIE 493

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L + + +  C  D+ +Y+ +IDGL K+G+ + ALEL   +  + +  + + Y+ +   L 
Sbjct: 494 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALS 553

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            +G+++K   +F ++++  +  + +++  +I    +  +  + IE L  M     +P+ S
Sbjct: 554 REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNES 613

Query: 368 IVSMVV 373
             ++++
Sbjct: 614 TYTILI 619



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 183/357 (51%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N +++ +C +G VDKA  L   +      PDVV+YN+++ GLC A  W   + L  EM+ 
Sbjct: 196 NLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR 255

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
               P++VTFN ++  LC+NG  +    +L  M +    P+   Y+T++DG C  G +  
Sbjct: 256 MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKV 315

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A E+   M S G K + V YN L+ G C  +  EE   L  EM  K      VT+N L  
Sbjct: 316 AHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVD 375

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
              +   V+  ++L E+M       D  TY T I+G CK G I EAV L +++    C+ 
Sbjct: 376 FFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 435

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           +  +Y  ++ GLC + R   A +L   + ++    + +T+N +I+ LC  G +++A +L 
Sbjct: 436 NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 495

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             M  N  +P++I + T+I G  +  K  + +ELL+ M  K + P+  I S +   L
Sbjct: 496 KQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 552



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 186/365 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ V+YN ++ GLC        + L  +M      P++VT+N+LI  LC    +    
Sbjct: 223 CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVH 282

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  +M + G  P +  +  I+D +CK G +  A  +L+ M    ++PN   Y+TL+ G 
Sbjct: 283 EVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGL 342

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +    EEL   M    C  DDV++NIL++ +C+N  V+  + L  +M+  G  P V
Sbjct: 343 CSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDV 402

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY T+  G  +   ++ A+ L + M       +T +Y   + GLC     V+A +L   
Sbjct: 403 ITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQ 462

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C L+   +N LI+ LCK G +E A+EL + +       D+++Y+ +I GL   G+
Sbjct: 463 MIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 522

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D+A +L   M    ++PN II+ ++     R  + +KVI++   +++  +  DA + + 
Sbjct: 523 TDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNA 582

Query: 372 VVDLL 376
           V+  L
Sbjct: 583 VISSL 587



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 169/365 (46%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P    Y+ I++  C+ G    A  +   +       DV   N +++ +C     ++A 
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKAL 212

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  ++   G +P VV++N ++  LC   +      L++ MV+    PN  T++TL+   
Sbjct: 213 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 272

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G   R  E+   M   GC  D   Y  +I+G CK   ++ A  +   M S G+KP V
Sbjct: 273 CRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNV 332

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YNTL  GL    + E   +L  EM   D   D  T+N  +D  C+NG +   +EL   
Sbjct: 333 VCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ 392

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +  C  D+  Y  +I+G CK G ++ A+ L +S+       + ++Y I++ GLC+  +
Sbjct: 393 MLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAER 452

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
              A DL   M +     N I F TLI+   +     + IELL +M      PD    S 
Sbjct: 453 WVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 512

Query: 372 VVDLL 376
           V+D L
Sbjct: 513 VIDGL 517



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 159/321 (49%), Gaps = 3/321 (0%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           YN+++ G C A     A+RL   +    V P+  T+  ++  LC  G++ +A  +LD M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
           +R   P    Y  +++  C  G    A  +   + + GC  D  + N+++N  C    V+
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           +AL L R++ S G +P VV+YN +  GL    +     +L EEM R     +  T+NT I
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
             LC+NG      E+   +    C  DI+ Y  +IDG+CK G L++A E+   +P   L 
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            +VV YN ++ GLC+  + ++  +L  +M +     + + F  L+  F +     +VIEL
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 354 LHKMKEKKVMPDASIVSMVVD 374
           L +M     MPD    + V++
Sbjct: 390 LEQMLVHGCMPDVITYTTVIN 410



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 170/361 (47%), Gaps = 15/361 (4%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           YN ++ G C+ G ++ A+ L   +    + P+  TY  ++  LC      +A  +  EM 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            +G  P    ++VI++  C+ G    A R+L+ +  R    +    + +++  C  G ++
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
           +A  L   + S GC+ D VSYN ++ G C  K       L  EMV     P +VT+NTL 
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 199 L-----GLFE-IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
                 GLFE +H+V        +M       D   Y T IDG+CK G++  A E+   +
Sbjct: 270 SYLCRNGLFERVHEV------LAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRM 323

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + ++  YN L+ GLC + R E   EL   +  +    D VT+NI++   C +G +
Sbjct: 324 PSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLV 383

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+  +L   M  +   P+VI + T+I+GF +     + + LL  M      P+    ++V
Sbjct: 384 DRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIV 443

Query: 373 V 373
           +
Sbjct: 444 L 444



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 158/352 (44%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
            V   PN  TY  ++  LC  G +  A A+  +M      P    Y+ ++   C    + 
Sbjct: 115 AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFR 174

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A R+  ++  +G    V   N++++ +C  G +D+A  LL  +      P+  +Y+ ++
Sbjct: 175 SAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVL 234

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C+  +    +EL   M  M C  + V++N LI+  C+N   E    +  +M   G  
Sbjct: 235 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCT 294

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P +  Y T+  G+ +   ++ A ++   M    +  +   YNT + GLC      E  EL
Sbjct: 295 PDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 354

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +    C LD   +N L+D  C++G ++  +EL   +     + DV+TY  +I+G C 
Sbjct: 355 LAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCK 414

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +G +D+A  L   M      PN I +  ++ G     +     +L+ +M ++
Sbjct: 415 EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQ 466


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 188/353 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTY+T+ID  CKEG +  A  LF+ M+   + P+  TY SLI   C A +  EA +
Sbjct: 391 KPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWK 450

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+  GV+ ++VT+  ++D LCK G+M EA  +   M++  + PN   Y+ L+ G+ 
Sbjct: 451 LLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYI 510

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++  A ++   M     K D + Y  +I G+C  +++EE   +  EM S+GI    V
Sbjct: 511 KAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPV 570

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
              T+    F+  +   AL  F+EMQ   V A   TY   IDGLCK G +  AV+ F  +
Sbjct: 571 ISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRM 630

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             L  + ++  Y  LIDGLCK+  +E A +LF  +  R +  D+  +  +I G    G +
Sbjct: 631 LSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNL 690

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +A  L   M E A+  ++ ++ +L+ GF +  +  +  +  ++M EK ++P+
Sbjct: 691 QEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPE 743



 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 197/364 (54%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +C   +  ++ +     + G +++A   F +M+     P   + N L+H L  + +    
Sbjct: 214 ICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLV 273

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           ++ F +M+  G+ PSV T+NV++D LCK G ++ + RL   M +  + P+  TY++L+DG
Sbjct: 274 RKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDG 333

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G +     LF  M+ +GC  D ++YN LIN YCK +++  A   + EM + G+KP 
Sbjct: 334 YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPN 393

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY+TL     +   ++ A+KLF +M+R  +  +  TY + ID  CK G + EA +L  
Sbjct: 394 VVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 453

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +     +L+I  Y  L+DGLCK+GR+  A E+FRS+ +  +  +   Y  ++HG     
Sbjct: 454 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE 513

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +M+ A  +   M E  + P++I++ ++I G     K  +   +L +MK + +  +  I +
Sbjct: 514 RMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIST 573

Query: 371 MVVD 374
            ++D
Sbjct: 574 TIID 577



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 194/365 (53%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           V C P+ +TYN +I+  CK   + +A   F +MK   + P+VVTY++LI   C       
Sbjct: 353 VGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQG 412

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A +LF +M   G+ P+  T+  ++D  CK G + EA +LL+ M+Q  V+ N  TY+ L+D
Sbjct: 413 AIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLD 472

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C  G++  AEE+F SM   G   +   Y  L++GY K + +E+A+ + ++M    IKP
Sbjct: 473 GLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKP 532

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            ++ Y ++  G     ++E    + EEM+   ++A+     T ID   K G   +A+  F
Sbjct: 533 DLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFF 592

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + +  +  E  I  Y  LIDGLCK+G +E+A++ F  +    L  +V  Y  +I GLC +
Sbjct: 593 QEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKN 652

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
             ++ A  LF +M+   + P++  F  LI G ++     + + L+ +M E  +  D  + 
Sbjct: 653 NCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVY 712

Query: 370 SMVVD 374
           + +V 
Sbjct: 713 TSLVS 717



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 195/405 (48%), Gaps = 35/405 (8%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N  IG    P+  TYN +ID LCKEG ++ ++ LF+QM+   ++PDVVTYNSLI G    
Sbjct: 278 NDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKV 337

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
               E   LF EM D G  P ++T+N +++  CK  KM  A      M    ++PN  TY
Sbjct: 338 GSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTY 397

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           STL+D FC  G +  A +LF  M   G   ++ +Y  LI+  CK   + EA  L  +M+ 
Sbjct: 398 STLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQ 457

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
            G+K  +VTY  L  GL +  ++  A ++F  M +D ++ +   Y   + G  K   + +
Sbjct: 458 AGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMED 517

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLC-------------------------------- 272
           A+++ + +     + D+  Y  +I G C                                
Sbjct: 518 AMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIID 577

Query: 273 ---KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
              K+G+   AL  F+ +    + A +VTY ++I GLC  G ++ A D F  M    + P
Sbjct: 578 AYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQP 637

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           NV ++ +LI G  + N      +L  +M+ + + PD +  + ++D
Sbjct: 638 NVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALID 682



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 164/312 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N VTY  ++DGLCK G + +A+ +F  M  + I+P+   Y +L+HG   A    +A +
Sbjct: 461 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMK 520

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M +  ++P ++ +  I+   C   K++E   +L+ M  R +  N    +T++D + 
Sbjct: 521 ILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYF 580

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK + A   F  M+ +G +   V+Y +LI+G CK   VE A+  +  M+S G++P V 
Sbjct: 581 KAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVA 640

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y +L  GL + + +E A KLF+EMQ   +  D + +   IDG  K+G + EA+ L   +
Sbjct: 641 VYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRM 700

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             L  E D+  Y  L+ G  + G L  A + F  +  + ++ + V    ++      GQ+
Sbjct: 701 TELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQL 760

Query: 313 DKAHDLFLDMEE 324
           D+A +L  +ME 
Sbjct: 761 DEAIELKNEMER 772



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 70/139 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN   Y ++IDGLCK   ++ AK LF +M+   + PD+  + +LI G     +  EA  
Sbjct: 636 QPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALV 695

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M +  ++  +  +  ++    + G++ +A +  + M+++ + P       L+  + 
Sbjct: 696 LISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYY 755

Query: 133 LTGKINRAEELFGSMESMG 151
             G+++ A EL   ME MG
Sbjct: 756 KRGQLDEAIELKNEMERMG 774



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 74/147 (50%)

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
           R+   + +  ++       + G + EA E F  +   +     ++ N L+  L KSG  +
Sbjct: 212 RNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQ 271

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           +  + F  +    +   V TYN+MI  LC +G ++ +  LF+ M E  ++P+V+ + +LI
Sbjct: 272 LVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLI 331

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPD 365
            G+ ++    +V  L ++MK+   +PD
Sbjct: 332 DGYGKVGSLEEVASLFNEMKDVGCVPD 358


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 205/390 (52%), Gaps = 37/390 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +++N +I  LC+ G VD+A  +F  M   N   D  TY++L+HGLC+    +EA  
Sbjct: 172 QPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVS 231

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  +G  P+ V FNV++  LCK G +  AS+L+D M  +   PN  TY++L+ G C
Sbjct: 232 LLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLC 291

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK+++A  L   M +  C  +D+++  L++G+ K+    + + +   +  KG +    
Sbjct: 292 LKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEF 351

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG-------YIVE- 244
           +Y++L  GLF+  + EH ++L++EM       +T  Y+  IDGLC+ G       Y++E 
Sbjct: 352 SYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEM 411

Query: 245 ---------------------------AVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
                                      A+ +++ +    C      Y+ LI+GLCK+G+L
Sbjct: 412 KNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKL 471

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM--EENAVAPNVIIFV 335
           + AL +++ +  R +  DVV Y+ MIHG CN   +++   LF  M      + P+V+ + 
Sbjct: 472 KEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYN 531

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            L++ F   N  S+ I++L+ M ++   PD
Sbjct: 532 ILLNAFCTKNSVSRAIDILNTMLDQGCDPD 561



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 174/323 (53%), Gaps = 6/323 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V +N +I  LCK+G + +A  L   M  +   P+ VTYNSL+HGLC     ++A  L
Sbjct: 243 PNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSL 302

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+     P+ +TF  ++D   K+G+  +  R+L  + ++  R N F+YS+L+ G   
Sbjct: 303 LNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFK 362

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK     +L+  M   GCK + + Y+ LI+G C+  + +EA     EM +KG  P   T
Sbjct: 363 EGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFT 422

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y++L  G FE   +  A+ +++EM  +D       Y+  I+GLCKNG + EA+ +++ + 
Sbjct: 423 YSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQML 482

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL----PRRVLVADVVTYNIMIHGLCND 309
               +LD+ AY+ +I G C +  +E  ++LF  +    P+  L  DVVTYNI+++  C  
Sbjct: 483 SRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPK--LQPDVVTYNILLNAFCTK 540

Query: 310 GQMDKAHDLFLDMEENAVAPNVI 332
             + +A D+   M +    P+ I
Sbjct: 541 NSVSRAIDILNTMLDQGCDPDFI 563



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 196/404 (48%), Gaps = 41/404 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM----KGENINPDVVTYNSLIHGLCHANDW 67
           CK    ++NT+++ + +EG  D A   +  +       NI P+ +++N +I  LC   + 
Sbjct: 132 CKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNV 191

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  +F  M D+       T++ +M  LC  G++DEA  LLD M      PN   ++ L
Sbjct: 192 DQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVL 251

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +   C  G ++RA +L  +M   GC  ++V+YN L++G C   ++++A+SL   MV+   
Sbjct: 252 ISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKC 311

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P  +T+ TL  G  +  +    +++   ++      +  +Y++ I GL K G     ++
Sbjct: 312 VPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQ 371

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL---------------FRSL----- 287
           L++ +    C+ +   Y+ LIDGLC+ G+ + A E                + SL     
Sbjct: 372 LWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYF 431

Query: 288 -----PRRVLVADVVT----------YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
                 + +LV   +T          Y+I+I+GLC +G++ +A  ++  M    +  +V+
Sbjct: 432 EAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVV 491

Query: 333 IFVTLIHGFVRINKPSKVIELLHKM--KEKKVMPDASIVSMVVD 374
            + ++IHGF       + ++L ++M     K+ PD    +++++
Sbjct: 492 AYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLN 535



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 134/300 (44%), Gaps = 72/300 (24%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVT------------------ 53
           C PN VTYN+++ GLC +G +DKA +L  +M      P+ +T                  
Sbjct: 276 CVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGV 335

Query: 54  -----------------YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
                            Y+SLI GL          +L+ EM+++G +P+ + ++ ++D L
Sbjct: 336 RVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGL 395

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           C+ GK DEA   L  M  +   PN+FTYS+LM G+   G I++A  ++  M    C H +
Sbjct: 396 CREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHE 455

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIK---------------------------- 188
           V Y+ILING CKN +++EAL ++++M+S+GIK                            
Sbjct: 456 VCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQ 515

Query: 189 ---------PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
                    P VVTYN L       + V  A+ +   M       D  T + F+  L  N
Sbjct: 516 MLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDN 575



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 23/151 (15%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN--INPDVVTYNSLIHGLCHANDWNEA 70
           K + V Y+++I G C    V++   LF QM   N  + PDVVTYN L++  C  N  + A
Sbjct: 487 KLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRA 546

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKN------GK--MDE-------------ASRLL 109
             +   M+DQG  P  +T ++ +  L  N      G+  +DE             AS ++
Sbjct: 547 IDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLIKRQRTVGASNII 606

Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           ++M+Q+ + P   T++  +   C   K+ + 
Sbjct: 607 EVMLQKFLLPKPSTWALAVQQLCKPMKVRKT 637



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/138 (20%), Positives = 73/138 (52%), Gaps = 5/138 (3%)

Query: 244 EAVELFRTLGI-LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV----VT 298
           +A++LF  +G    C+  ++++N +++ + + G  ++ALE +  +      +++    ++
Sbjct: 118 KALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLS 177

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           +N++I  LC  G +D+A ++F  M +     +   + TL+HG     +  + + LL +M+
Sbjct: 178 FNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQ 237

Query: 359 EKKVMPDASIVSMVVDLL 376
            +   P+    ++++  L
Sbjct: 238 VEGTFPNPVAFNVLISAL 255


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 191/366 (52%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G + + N V  NT+I G   EG + +A  L+  M  +   PDV TY+ L+HGLC    +
Sbjct: 305 LGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRF 364

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A R+  EM ++G  P++VT++ ++   C+NG  D+A  +LD M+ +    N+  Y+ +
Sbjct: 365 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGI 424

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +   C  GK+++A  L   M+S GCK D  +YN +I   C N  +EEA  ++R ++ +G+
Sbjct: 425 IYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGV 484

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
               +TYNTL   L    + +  L+L  EM       D  +YN  I  LCK G +  ++ 
Sbjct: 485 VANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMA 544

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +     + +  +YN LI+ LCK+G++  ALEL + +  + L  D+VTYN +I+GLC
Sbjct: 545 LLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLC 604

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G    A +L   +    V P+++ +  LI    ++        LL K     ++P+  
Sbjct: 605 KVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNER 664

Query: 368 IVSMVV 373
              M+V
Sbjct: 665 TWGMMV 670



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 186/354 (52%), Gaps = 4/354 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY  ++ GLC+    D+A A+  ++   N    VV  N++I G         A 
Sbjct: 278 CMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVN----VVMLNTVIRGCLTEGKLARAT 333

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L+  M  +G  P V T++++M  LCK G+   A R+LD M ++   PN  TYSTL+  F
Sbjct: 334 ELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSF 393

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G  + A  +   M + G   +   YN +I   CK+ ++++A  L +EM S+G KP +
Sbjct: 394 CRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDI 453

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYNT+   L     +E A  +F  +  + V A+  TYNT I  L +NG   E + L   
Sbjct: 454 CTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASE 513

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +  C+LD+ +YN LI  LCK G ++ ++ L   +  + +  +  +YN++I+ LC  G+
Sbjct: 514 MLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGK 573

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +  A +L  +M    + P+++ + TLI+G  ++      + LL K+  + V PD
Sbjct: 574 VRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPD 627



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 176/332 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TY+ ++ GLCK G    A  +  +M+ +   P++VTY++L+H  C    W++A+
Sbjct: 344 CPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDAR 403

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  +M+ +G   +   +N I+  LCK+GK+D+A+RL+  M  +  +P+  TY+T++   
Sbjct: 404 AMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHL 463

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    +  AE +F ++   G   + ++YN LI+   +N   +E L L  EM+  G +  V
Sbjct: 464 CNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDV 523

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++YN L   L +   V+ ++ L EEM    +  +  +YN  I+ LCK G + +A+EL + 
Sbjct: 524 ISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKE 583

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       DI  YN LI+GLCK G    AL L   LP   +  D+VTYNI+I   C    
Sbjct: 584 MLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRL 643

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           +D A  L        + PN   +  ++  FVR
Sbjct: 644 LDDAAMLLDKAISGGIVPNERTWGMMVQNFVR 675



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 184/364 (50%), Gaps = 6/364 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V Y T+I  L  +G V +A  L  +M       DV T+N L+ GLC      EA 
Sbjct: 208 CVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAA 267

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL   MM QG  PSVVT+  ++  LC+  + DEA      M+ R    N    +T++ G 
Sbjct: 268 RLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA----MLGRLPEVNVVMLNTVIRG- 322

Query: 132 CLT-GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           CLT GK+ RA EL+  M S GC  D  +Y+IL++G CK      A+ +  EM  KG  P 
Sbjct: 323 CLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPN 382

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           +VTY+TL          + A  + ++M     + ++  YN  I  LCK+G + +A  L +
Sbjct: 383 IVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQ 442

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C+ DI  YN +I  LC +  +E A  +FR+L    +VA+ +TYN +IH L  +G
Sbjct: 443 EMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNG 502

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +  +   L  +M  +    +VI +  LI    +     + + LL +M  K + P+    +
Sbjct: 503 RWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYN 562

Query: 371 MVVD 374
           M+++
Sbjct: 563 MLIN 566



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 169/376 (44%), Gaps = 31/376 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+  +YN ++  L +      A  L+ +M  + + P   T+      LC      +A  
Sbjct: 139 SPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALA 198

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M   G  P  V +  ++  L   G + EA+ LLD M+      +  T++ L+ G C
Sbjct: 199 LLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLC 258

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS--------------- 177
             G++  A  L   M + GC    V+Y  L+ G C+ ++ +EA +               
Sbjct: 259 GLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNT 318

Query: 178 ----------------LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
                           LY  M SKG  P V TY+ L  GL ++ +   A+++ +EM+   
Sbjct: 319 VIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKG 378

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
            A +  TY+T +   C+NG   +A  +   +      ++ Q YN +I  LCK G+L+ A 
Sbjct: 379 CAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQAT 438

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            L + +  +    D+ TYN MI+ LCN+  M++A  +F ++ E  V  N I + TLIH  
Sbjct: 439 RLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHAL 498

Query: 342 VRINKPSKVIELLHKM 357
           +R  +  + + L  +M
Sbjct: 499 LRNGRWQEGLRLASEM 514



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 145/319 (45%), Gaps = 4/319 (1%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           ++P   +YN ++  L  A+   +A  L+  M+   V P+  TF V    LC+ G+  +A 
Sbjct: 138 VSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDAL 197

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
            LL  M +    P+A  Y T++      G +  A  L   M  MGC  D  ++N L+ G 
Sbjct: 198 ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGL 257

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           C    V EA  L   M+++G  P+VVTY  L  GL    Q + A  +   +   +V    
Sbjct: 258 CGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVV--- 314

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
              NT I G    G +  A EL+  +G   C  D+  Y+ L+ GLCK GR   A+ +   
Sbjct: 315 -MLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDE 373

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +  +    ++VTY+ ++H  C +G  D A  +   M     + N   +  +I+   +  K
Sbjct: 374 MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGK 433

Query: 347 PSKVIELLHKMKEKKVMPD 365
             +   L+ +MK +   PD
Sbjct: 434 LDQATRLVQEMKSQGCKPD 452


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 128/388 (32%), Positives = 193/388 (49%), Gaps = 40/388 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  +T+NT++D   K G +++   ++L+MK  NI    VTYN LI+G   +    EA+R 
Sbjct: 272 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRF 331

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   G   +  +FN +++  CK G  DEA  + D M+   + P   TY+  +   C 
Sbjct: 332 HGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCE 391

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+I+ A EL  SM +     D VSYN L++GY K ++  EA  L+ ++ +  I P++VT
Sbjct: 392 FGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVT 447

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF---- 249
           YNTL  GL E   +E A +L EEM    +  D  TY T + G  KNG +  A E++    
Sbjct: 448 YNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEML 507

Query: 250 -------------RTLGILKC-------------------ELDIQAYNCLIDGLCKSGRL 277
                        RT+G L+                      D+  YN  IDGLCK G L
Sbjct: 508 RKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNL 567

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           E A+E  R + R  LV D VTY  +I G    G+   A DL+ +M    ++P+VI +  L
Sbjct: 568 EKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVL 627

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPD 365
           IHG  +  +  +  +   +MK++ V P+
Sbjct: 628 IHGHAKAGRLEQAFQYSTEMKKRGVRPN 655



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 188/354 (53%), Gaps = 5/354 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P T TYN  I  LC+ G +D A+ L   M      PDVV+YN+L+HG      + EA  L
Sbjct: 377 PTTSTYNIYIRALCEFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMRKFVEASLL 432

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F ++    + PS+VT+N ++D LC++G ++ A RL + M  + + P+  TY+TL+ GF  
Sbjct: 433 FDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVK 492

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK-PTVV 192
            G ++ A E++  M   G K D  +Y     G  +  + E+A  L+ EMV++    P + 
Sbjct: 493 NGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLT 552

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN    GL ++  +E A++   ++ R  +  D  TY T I G  + G    A +L+  +
Sbjct: 553 IYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEM 612

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +    +  Y  LI G  K+GRLE A +    + +R +  +V+T+N ++HG+C  G +
Sbjct: 613 LSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNI 672

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           D+A+     MEE  ++PN   +  LI     ++K  +V++L  +M +K++ PD 
Sbjct: 673 DEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDG 726



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 172/350 (49%), Gaps = 5/350 (1%)

Query: 28  KEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVV 87
           K+   +K    F +M  +   P V   N ++  L  +   N+A+ ++  M+  G+ P+V+
Sbjct: 216 KKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVI 275

Query: 88  TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
           TFN ++D   K G ++   ++   M +R++  +  TY+ L++GF  +GK+  A    G M
Sbjct: 276 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDM 335

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
           +  G      S+N LI GYCK    +EA  +  EM++ GI PT  TYN     L E  ++
Sbjct: 336 QRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRI 395

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
           + A +L   M     A D  +YNT + G  K    VEA  LF  L        I  YN L
Sbjct: 396 DDARELLSSM----AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTL 451

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           IDGLC+SG LE A  L   +  +++  DV+TY  ++ G   +G +  A +++ +M    +
Sbjct: 452 IDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGI 511

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKM-KEKKVMPDASIVSMVVDLL 376
            P+   + T   G +R+    K   L  +M  E    PD +I ++ +D L
Sbjct: 512 KPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGL 561



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 141/296 (47%), Gaps = 36/296 (12%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+IDGLC+ G ++ A+ L  +M  + I PDV+TY +L+ G     + + A  +
Sbjct: 443 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEI 502

Query: 74  FFEMMDQGVQPS------------------------------------VVTFNVIMDELC 97
           + EM+ +G++P                                     +  +NV +D LC
Sbjct: 503 YDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLC 562

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K G +++A      + +  + P+  TY+T++ G+   G+   A +L+  M S       +
Sbjct: 563 KVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVI 622

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y +LI+G+ K   +E+A     EM  +G++P V+T+N L  G+ +   ++ A +   +M
Sbjct: 623 TYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKM 682

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
           + + ++ +  +Y   I   C      E V+L++ +   + E D   +  L   L K
Sbjct: 683 EEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 738



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 106/193 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   YN  IDGLCK G ++KA     ++    + PD VTY ++I G      +  A+ L
Sbjct: 549 PDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDL 608

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + EM+ + + PSV+T+ V++    K G++++A +    M +R VRPN  T++ L+ G C 
Sbjct: 609 YDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCK 668

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G I+ A      ME  G   +  SY ILI+ +C   + EE + LY+EM+ K I+P   T
Sbjct: 669 AGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYT 728

Query: 194 YNTLFLGLFEIHQ 206
           +  LF  L + H+
Sbjct: 729 HRALFKHLEKDHE 741



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 1/228 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN-PDVVTYNSLIHGLCHANDWNEAK 71
           KP+   Y T   G  + G  +KA  L  +M  E+ + PD+  YN  I GLC   +  +A 
Sbjct: 512 KPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAI 571

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
               ++   G+ P  VT+  ++    + G+   A  L D M+ + + P+  TY  L+ G 
Sbjct: 572 EFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGH 631

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G++ +A +    M+  G + + +++N L++G CK   ++EA     +M  +GI P  
Sbjct: 632 AKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNK 691

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            +Y  L     ++ + E  +KL++EM   ++  D  T+      L K+
Sbjct: 692 YSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 739



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 101/246 (41%), Gaps = 39/246 (15%)

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
           Y K    E+ L  + +M+ KG  P+V   N +   L +   +  A +++E M    +   
Sbjct: 214 YTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPT 273

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
             T+NT +D   K G +    +++  +     E     YN LI+G  KSG++E A     
Sbjct: 274 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHG 333

Query: 286 SLPR-------------------------------RVLVADVV----TYNIMIHGLCNDG 310
            + R                                +L A +     TYNI I  LC  G
Sbjct: 334 DMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFG 393

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++D A +L   M     AP+V+ + TL+HG++++ K  +   L   +K   + P     +
Sbjct: 394 RIDDARELLSSM----AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYN 449

Query: 371 MVVDLL 376
            ++D L
Sbjct: 450 TLIDGL 455


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 196/364 (53%), Gaps = 4/364 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN+VTY+T+I+GLC EG VD+A  +  +M  + I P V TY   I  LC      EA 
Sbjct: 264 CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAI 323

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M  +G +P+V T+  ++  L + GK++ A  L   M++  + PN  TY+ L++  
Sbjct: 324 ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINEL 383

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C+ G+ + A ++F  ME  G   +  +YN +I G C   ++E+A+ L+ +M+  G  PTV
Sbjct: 384 CVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTV 443

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  G      V +A +L + M+ +    D  TYN  + G  K G +  A   F+ 
Sbjct: 444 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 503

Query: 252 LGILKCELDIQ--AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           +  ++C L+    +Y  LIDG  K G+++IAL L + +       +V +YN +I+GL  +
Sbjct: 504 M--VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKE 561

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            +  +A  +   M E  + PNVI + TLI G  R  +     ++ H M+++K +P+    
Sbjct: 562 NRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTY 621

Query: 370 SMVV 373
           S ++
Sbjct: 622 SSLI 625



 Score =  197 bits (500), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 187/360 (51%), Gaps = 4/360 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNTVTYN +I+ LC  G    A  +F  M+G     +  TYN +I GLC   D  +A  L
Sbjct: 371 PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 430

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+  G  P+VVT+N +++     G ++ A+RLLDLM +    P+ +TY+ L+ GF  
Sbjct: 431 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 490

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A   F  M   G   + VSY  LI+G+ K+ +V+ ALSL + M   G  P V +
Sbjct: 491 WGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVES 550

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GL + ++   A K+ ++M    +  +  TY T IDGLC+NG    A ++F  + 
Sbjct: 551 YNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 610

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             KC  ++  Y+ LI GLC+ G+ + A      +        + TY+ ++ GLC  G+  
Sbjct: 611 KRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFY 666

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  L  DM+E    P+  I+ +L+    +  +    +++ H ++ K      SI   ++
Sbjct: 667 EAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALI 726



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/386 (32%), Positives = 190/386 (49%), Gaps = 39/386 (10%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           NT TYN II GLC  G ++KA  LF +M      P VVTYN+LI+G     + N A RL 
Sbjct: 407 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 466

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M + G +P   T+N ++    K GK++ AS     MV+  + PN  +Y+ L+DG    
Sbjct: 467 DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKD 526

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK++ A  L   ME MGC  +  SYN +ING  K     EA  +  +MV +G+ P V+TY
Sbjct: 527 GKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITY 586

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            TL  GL    + + A K+F +M++     +  TY++ I GLC+ G   EA E    +G 
Sbjct: 587 TTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA-ERMSEIG- 644

Query: 255 LKCELDIQAYNCLIDGLCKSGR---------------------------------LEI-- 279
             CE  +  Y+ L+ GLC+ GR                                 LE+  
Sbjct: 645 --CEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDH 702

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           AL++F S+  +     +  Y  +I  LC  GQ+++A  LF +M E     + I++  L+ 
Sbjct: 703 ALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVD 762

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPD 365
           G ++  +    ++LLH M+ K   P+
Sbjct: 763 GLLKEGELDLCMKLLHIMESKNFTPN 788



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 205/399 (51%), Gaps = 35/399 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ +T+NT+I+ L K+G V +A+ +  Q+   +++PDV TY SLI G C   + + A  
Sbjct: 195 QPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFG 254

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  M+ +G  P+ VT++ +++ LC  G++DEA  +L+ M+++ + P  +TY+  +   C
Sbjct: 255 VFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 314

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                  A EL   M+  GC+ +  +Y  LI+G  +  ++E A+ LY +M+ +G+ P  V
Sbjct: 315 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV 374

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF--- 249
           TYN L   L    +   ALK+F  M+     A+T TYN  I GLC  G I +A+ LF   
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 434

Query: 250 -----------------------------RTLGILK---CELDIQAYNCLIDGLCKSGRL 277
                                        R L ++K   CE D   YN L+ G  K G+L
Sbjct: 435 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 494

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           E A   F+ +    L  + V+Y  +I G   DG++D A  L   MEE    PNV  +  +
Sbjct: 495 ESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAV 554

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           I+G  + N+ S+  ++  KM E+ ++P+    + ++D L
Sbjct: 555 INGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGL 593



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 177/347 (51%), Gaps = 4/347 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+  TYN ++ G  K G ++ A   F +M    +NP+ V+Y +LI G       + A 
Sbjct: 474 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIAL 533

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M + G  P+V ++N +++ L K  +  EA ++ D MV++ + PN  TY+TL+DG 
Sbjct: 534 SLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGL 593

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+   A ++F  ME   C  +  +Y+ LI G C+  + +EA      M   G +PT+
Sbjct: 594 CRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTL 649

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY+TL  GL    +   A +L ++M+      D   Y + +   CKN  +  A+++F +
Sbjct: 650 DTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHS 709

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     +L +  Y  LI  LCK+G++E A  LF ++  +   AD + + +++ GL  +G+
Sbjct: 710 IEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGE 769

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           +D    L   ME     PN+  +V L     RI K  +   L  K+K
Sbjct: 770 LDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 816



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 104/296 (35%), Positives = 160/296 (54%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+ L+ +M++ G+QPS++TFN +++ L K GK+ EA  +L  + Q D+ P+ FTY++L+ 
Sbjct: 182 ARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLIL 241

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C    ++ A  +F  M   GC  + V+Y+ LING C    V+EAL +  EM+ KGI+P
Sbjct: 242 GHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEP 301

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           TV TY      L  I   E A++L   M++     +  TY   I GL + G +  A+ L+
Sbjct: 302 TVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLY 361

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +       +   YN LI+ LC  GR   AL++F  +     +A+  TYN +I GLC  
Sbjct: 362 HKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLG 421

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           G ++KA  LF  M +    P V+ + TLI+G++     +    LL  MKE    PD
Sbjct: 422 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPD 477



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 179/355 (50%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           NT++  L K   V+ A+ L+ QM    I P ++T+N+LI+ L       EA+ +  ++  
Sbjct: 167 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 226

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
             + P V T+  ++   C+N  +D A  + D MV+    PN+ TYSTL++G C  G+++ 
Sbjct: 227 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 286

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A ++   M   G +    +Y + I   C  +  EEA+ L   M  +G +P V TY  L  
Sbjct: 287 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 346

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           GL  + ++E A+ L+ +M ++ +  +T TYN  I+ LC  G    A+++F  +       
Sbjct: 347 GLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA 406

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           + Q YN +I GLC  G +E A+ LF  + +   +  VVTYN +I+G    G ++ A  L 
Sbjct: 407 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 466

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             M+EN   P+   +  L+ GF +  K         +M E  + P+    + ++D
Sbjct: 467 DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALID 521



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 141/289 (48%)

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
           E+   G   S+ + N ++ +L K   ++ A  L   M+   ++P+  T++TL++     G
Sbjct: 153 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 212

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           K+  AE +   +       D  +Y  LI G+C+N+ ++ A  ++  MV +G  P  VTY+
Sbjct: 213 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 272

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           TL  GL    +V+ AL + EEM    +     TY   I  LC   +  EA+EL   +   
Sbjct: 273 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
            C  ++Q Y  LI GL + G+LE+A+ L+  + +  LV + VTYN +I+ LC  G+   A
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
             +F  ME +    N   +  +I G        K + L  KM +   +P
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLP 441



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 135/270 (50%), Gaps = 5/270 (1%)

Query: 112 MVQRDVRPNAFTYS----TLMDGFCLTGK-INRAEELFGSMESMGCKHDDVSYNILINGY 166
           M+ R VR   F  +     LM   C   + I R  +    +  MG      S N L+   
Sbjct: 114 MLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQL 173

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
            K + VE A +LY++M++ GI+P+++T+NTL   L +  +V  A  +  ++ + D++ D 
Sbjct: 174 AKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDV 233

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            TY + I G C+N  +  A  +F  +    C+ +   Y+ LI+GLC  GR++ AL++   
Sbjct: 234 FTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEE 293

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +  + +   V TY + I  LC     ++A +L   M++    PNV  +  LI G  R+ K
Sbjct: 294 MIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK 353

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               I L HKM ++ ++P+    + +++ L
Sbjct: 354 LEVAIGLYHKMLKEGLVPNTVTYNALINEL 383


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 208/412 (50%), Gaps = 38/412 (9%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           +A+ + E     +PN V+Y  ++ GLC     D+A AL   M+   +  DVVTY +LI G
Sbjct: 100 LADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRG 159

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           LC A + + A  L  EM   GV P+V+ ++ ++   C++G+  + S++ + M +  V P+
Sbjct: 160 LCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPD 219

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
              ++  +D  C  G+I +A ++   M   G + + V+YN+LIN  CK   V EAL+L  
Sbjct: 220 VIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRN 279

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD--VAADTSTYNTFIDGLCK 238
           EM  KG+ P VVTYNTL  GL  + +++ A+ L EEM + D  V  D  T+N+ I GLCK
Sbjct: 280 EMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCK 339

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
            G + +A+ +   +    C  ++  YN LI G  +  ++ +A+ L   L    L  D  T
Sbjct: 340 IGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFT 399

Query: 299 YNIMIHG-----------------------------------LCNDGQMDKAHDLFLDME 323
           Y+I+I+G                                   LC  G M++A  LF +M+
Sbjct: 400 YSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMD 459

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
            N    + + + T+++G  +        +LL  M ++ + PDA   S+++++
Sbjct: 460 MNC-GLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINM 510



 Score =  203 bits (517), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 205/435 (47%), Gaps = 73/435 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + + VTY T+I GLC    +D A  L  +M G  ++P+V+ Y+ L+ G C +  W +  +
Sbjct: 147 RADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSK 206

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM   GV+P V+ F   +D+LCK G++ +A ++ D+MVQR + PN  TY+ L++  C
Sbjct: 207 VFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLC 266

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILI----------------------------- 163
             G +  A  L   M+  G   D V+YN LI                             
Sbjct: 267 KEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPD 326

Query: 164 --------NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
                   +G CK   + +A+S+   M  +G    +VTYN L  G   +H+V  A+ L  
Sbjct: 327 VVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMS 386

Query: 216 EMQRDDVAADTSTYNTFIDG-----------------------------------LCKNG 240
           E+    +  D+ TY+  I+G                                   LC+ G
Sbjct: 387 ELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLG 446

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            + +A+ LF  +  + C LD  AY+ ++ G CKSG ++ A +L + +    L  D VTY+
Sbjct: 447 MMEQAMVLFNEMD-MNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYS 505

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           I+I+     G +++A  +   M  +   P+V +F +LI G+    + +K+++L+H+M+ K
Sbjct: 506 ILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAK 565

Query: 361 KVMPDASIVSMVVDL 375
            V  D   +  +V L
Sbjct: 566 NVAIDPKFICTLVRL 580



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 151/283 (53%), Gaps = 7/283 (2%)

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG-KINRAEELFGSMES- 149
           +++   +   + EA  LL  +   DVR +A +Y+ ++   C  G  + +A  L   M   
Sbjct: 50  LLNRRLRAAPVTEACSLLSALP--DVR-DAVSYNIVLAALCRRGGDLRQALSLLADMSRE 106

Query: 150 --MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
                + + VSY +++ G C ++  +EA++L R M + G++  VVTY TL  GL +  ++
Sbjct: 107 AHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAEL 166

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
           + AL+L  EM    V  +   Y+  + G C++G   +  ++F  +  L  E D+  +   
Sbjct: 167 DGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGF 226

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           ID LCK GR+  A+++   + +R L  +VVTYN++I+ LC +G + +A  L  +M++  V
Sbjct: 227 IDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGV 286

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           AP+V+ + TLI G   + +    + LL +M +   + +  +V+
Sbjct: 287 APDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVT 329



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 13/222 (5%)

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTV---VTYNTLFLGLFEIH-QVEHALKLFEEM 217
           L+N   +   V EA SL   +      P V   V+YN +   L      +  AL L  +M
Sbjct: 50  LLNRRLRAAPVTEACSLLSAL------PDVRDAVSYNIVLAALCRRGGDLRQALSLLADM 103

Query: 218 QRDDVAA---DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
            R+   A   +  +Y   + GLC +    EAV L R++       D+  Y  LI GLC +
Sbjct: 104 SREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDA 163

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
             L+ ALEL   +    +  +V+ Y+ ++ G C  G+      +F +M    V P+VI+F
Sbjct: 164 AELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMF 223

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              I    +  +  K +++   M ++ + P+    +++++ L
Sbjct: 224 TGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCL 265



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 3/106 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+ + C  + V Y+T++ G CK G +  AK L   M  E + PD VTY+ LI+      D
Sbjct: 457 EMDMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGD 516

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM 112
             EA+R+  +M   G  P V  F+ ++      G+++   ++LDL+
Sbjct: 517 LEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQIN---KILDLI 559


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 186/362 (51%), Gaps = 7/362 (1%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           IG   KP   TYN +ID +CKEG V+ A+ LF +MK   + PD VTYNS+I G       
Sbjct: 87  IGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRL 146

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++    F EM D   +P V+T+N +++  CK GK+ +       M +  ++PN  +YSTL
Sbjct: 147 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTL 206

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D FC  G + +A + +  M  +G   ++ +Y  LI+ YCK   + +A  L  EM+  G+
Sbjct: 207 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGV 266

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +  VVTY  L  GL         L L +EM   D+     T+   IDGLCKN  + +A++
Sbjct: 267 EWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAID 326

Query: 248 LFRTLGILKCELDIQA----YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
            F   G +  +  +QA    Y  +IDGLCK  ++E A  LF  + ++ LV D   Y  ++
Sbjct: 327 YF---GRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLM 383

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            G    G + +A  L   M E  +  +++ + +L+ G    N+  K    L +M  + + 
Sbjct: 384 DGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIH 443

Query: 364 PD 365
           PD
Sbjct: 444 PD 445



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 188/365 (51%), Gaps = 1/365 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC P    ++ +   L   G V++A   F +MK   + P   + N L+H        +  
Sbjct: 20  VCVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGV 79

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           KR F +M+  G +P+V T+N+++D +CK G ++ A  L + M  R + P+  TY++++DG
Sbjct: 80  KRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDG 139

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           F   G+++     F  M+ M C+ D ++YN LIN +CK  ++ + L  +REM   G+KP 
Sbjct: 140 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPN 199

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VV+Y+TL     +   ++ A+K + +M+R  +  +  TY + ID  CK G + +A  L  
Sbjct: 200 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLAN 259

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +  +  E ++  Y  LIDGLC        L L   +    +   VVT+ ++I GLC + 
Sbjct: 260 EMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNK 319

Query: 311 QMDKAHDLFLDMEEN-AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            + KA D F  +  +  +  N  I+  +I G  + N+      L  +M +K ++PD +  
Sbjct: 320 LVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAY 379

Query: 370 SMVVD 374
           + ++D
Sbjct: 380 TSLMD 384



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 174/341 (51%), Gaps = 1/341 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVTYN++IDG  K G +D     F +MK     PDV+TYN+LI+  C      +    
Sbjct: 128 PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEF 187

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM   G++P+VV+++ ++D  CK G M +A +    M +  + PN +TY++L+D +C 
Sbjct: 188 FREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCK 247

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A  L   M  +G + + V+Y  LI+G C  +   E L L  EMV   IK TVVT
Sbjct: 248 IGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVT 307

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +  L  GL +   V  A+  F  +  D  + A+ + Y   IDGLCK   +  A  LF  +
Sbjct: 308 FCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQM 367

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D  AY  L+DG  K G +  AL L   +    +  D++ Y  ++ GL +  Q+
Sbjct: 368 AQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQL 427

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            KA     +M    + P+ ++ ++++     +   ++ +EL
Sbjct: 428 QKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVEL 468



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 112/242 (46%), Gaps = 38/242 (15%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G+V  PN  TY ++ID  CK G +  A  L  +M    +  +VVTY +LI GLC   + 
Sbjct: 229 VGLV--PNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENP 286

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKN---------------------------- 99
            E   L  EM++  ++ +VVTF V++D LCKN                            
Sbjct: 287 TEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTA 346

Query: 100 --------GKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
                    +++ A+ L + M Q+ + P+   Y++LMDG    G +  A  L   M   G
Sbjct: 347 MIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETG 406

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            K D ++Y  L+ G     ++++A S   EM+ +GI P  V   ++    +E+  +  A+
Sbjct: 407 MKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAV 466

Query: 212 KL 213
           +L
Sbjct: 467 EL 468


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 199/376 (52%), Gaps = 15/376 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN ++YN +I+GLC+EG + +   +  +M     + D VTYN+LI G C   ++++A  
Sbjct: 272 EPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALV 331

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM+  G+ PSV+T+  ++  +CK G M+ A+  LD M  R + PN  TY+TL+DGF 
Sbjct: 332 MHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFS 391

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +N A  +   M   G     V+YN LING+C   ++ +A+++  +M  KG+ P VV
Sbjct: 392 QKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVV 451

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y+T+  G    + V+ AL++  +M    +  DT TY++ I G C+     EA +LF  +
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEM 511

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +    D   Y  LI+  C  G L+ A++L   +  + ++ DVVTY+++I+GL    + 
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQART 571

Query: 313 DKAHDLFLDMEENAVAPNVIIF---------------VTLIHGFVRINKPSKVIELLHKM 357
            +A  L L +      P+ + +               V+LI GF      ++  ++   M
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631

Query: 358 KEKKVMPDASIVSMVV 373
            EK   PD +  ++++
Sbjct: 632 LEKNHKPDGTAYNVMI 647



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 191/388 (49%), Gaps = 53/388 (13%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTYNT+I G CKEG   +A  +  +M    ++P V+TY SLIH +C A + N A     +
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQ 370

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M  +G+ P+  T+  ++D   + G M+EA R+L  M+     P+  TY+ L++G C+ GK
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGK 430

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +  A  +   M+  G   D VSY+ +++G+C++ +V+EAL + R+MV+KGIKP  +TY++
Sbjct: 431 MVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSS 490

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR------ 250
           L  G  E  + + A  LF+EM R  +  D  TY   I+  C  G + +A++L        
Sbjct: 491 LIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKG 550

Query: 251 ------TLGILKCELDIQAY----------------------------NC---------- 266
                 T  +L   L+ QA                             NC          
Sbjct: 551 VLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LI G C  G +  A ++F S+  +    D   YN+MIHG C  G + KA+ L+ +M ++ 
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSG 670

Query: 327 V---APNVIIFVTLIHGFVRINKPSKVI 351
                  VI  V  +H   ++N+ + VI
Sbjct: 671 FLLHTVTVIALVKTLHKEGKVNELNSVI 698



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 188/361 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN +I G C  G +D A   F +M+ +   P+VVTYN+LI G C     ++   L
Sbjct: 203 PNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFEL 262

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +G++P+++++NV+++ LC+ G+M E S +L  M +R    +  TY+TL+ G+C 
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCK 322

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  ++A  +   M   G     ++Y  LI+  CK   +  A     +M  +G+ P   T
Sbjct: 323 EGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERT 382

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G  +   +  A ++ +EM  +  +    TYN  I+G C  G +V+A+ +   + 
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMK 442

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+ +Y+ ++ G C+S  ++ AL + R +  + +  D +TY+ +I G C   +  
Sbjct: 443 EKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTK 502

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A DLF +M    + P+   +  LI+ +       K I+L ++M EK V+PD    S+++
Sbjct: 503 EACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLI 562

Query: 374 D 374
           +
Sbjct: 563 N 563



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 181/364 (49%), Gaps = 1/364 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA-NDWNE 69
           +C   +  ++ ++    +   +DKA ++    +     P V++YN+++     +  + + 
Sbjct: 129 LCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISF 188

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+ +F EM+   V P+V T+N+++   C  G +D A R  D M ++   PN  TY+TL+D
Sbjct: 189 AENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLID 248

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+C   KI+   EL  SM   G + + +SYN++ING C+   ++E   +  EM  +G   
Sbjct: 249 GYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSL 308

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             VTYNTL  G  +      AL +  EM R  ++    TY + I  +CK G +  A E  
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFL 368

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             + +     + + Y  L+DG  + G +  A  + + +        VVTYN +I+G C  
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIA 428

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G+M  A  +  DM+E  + P+V+ + T++ GF R     + + +  KM  K + PD    
Sbjct: 429 GKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITY 488

Query: 370 SMVV 373
           S ++
Sbjct: 489 SSLI 492



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 178/334 (53%), Gaps = 24/334 (7%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY T++DG  ++G++++A  +  +M     +P VVTYN+LI+G C A    +A  +
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAV 437

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M ++G+ P VV+++ ++   C++  +DEA R+   MV + ++P+  TYS+L+ GFC 
Sbjct: 438 LEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCE 497

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +   A +LF  M  +G   D+ +Y  LIN YC   ++++A+ L+ EMV KG+ P VVT
Sbjct: 498 QRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVT 557

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID---------------GLCK 238
           Y+ L  GL +  +   A +L  ++  ++      TY+T I+               G C 
Sbjct: 558 YSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCM 617

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
            G + EA ++F ++     + D  AYN +I G C+ G +  A  L++ + +   +   VT
Sbjct: 618 KGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVT 677

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
              ++  L  +G+++         E N+V  NV+
Sbjct: 678 VIALVKTLHKEGKVN---------ELNSVIANVL 702



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 111/196 (56%), Gaps = 15/196 (7%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+T+TY+++I G C++    +A  LF +M    + PD  TY +LI+  C   D  +A +
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQ 541

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD--- 129
           L  EM+++GV P VVT++V+++ L K  +  EA RLL  +   +  P+  TY TL++   
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601

Query: 130 ------------GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
                       GFC+ G +  A+++F SM     K D  +YN++I+G+C+  ++ +A S
Sbjct: 602 NIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYS 661

Query: 178 LYREMVSKGIKPTVVT 193
           LY+EMV  G     VT
Sbjct: 662 LYKEMVKSGFLLHTVT 677


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 119/360 (33%), Positives = 191/360 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYNT++ GLC EG +D+A  L  +M+   + PDVVTYN+LI G       + A +L
Sbjct: 314 PDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKL 373

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +GV+ + VT N+++   C  GK+DEAS ++  MV+    P+ FTY+T+++G+C 
Sbjct: 374 VEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCK 433

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A ++   M   G K D  + N L++  C  K++++A +L  +   +G     VT
Sbjct: 434 AGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVT 493

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL +G F+  Q + ALKL+EEM+   + A   TYNT I GLC +G   +AV+    L 
Sbjct: 494 YGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELL 553

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D    N +I G C  G +E A +    +    L  D+ T NI++ GLC +G ++
Sbjct: 554 EKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLE 613

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           K   LF          + + +  +I  F +  +     +L+ +M+ K + PD    + +V
Sbjct: 614 KGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIV 673



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 123/368 (33%), Positives = 191/368 (51%), Gaps = 8/368 (2%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           + N  GE G  C P+ VTYNT++  LCK   + + + L LQMK   + P+  TYN L+HG
Sbjct: 233 LINQMGEYG--CCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHG 290

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
            C      EA  +   M  +G+ P V T+N ++  LC  GK+DEA RL D M    + P+
Sbjct: 291 YCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPD 350

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY+TL+DG       + A +L   M++ G K + V++NI+I  +C   +++EA ++  
Sbjct: 351 VVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMV 410

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           +MV  G  P   TYNT+  G  +  ++  A K+ +EM R  +  DT T NT +  +C   
Sbjct: 411 KMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEK 470

Query: 241 YIVEAVELF---RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
            + +A  L    R  G +   LD   Y  LI G  K  + + AL+L+  +    +VA ++
Sbjct: 471 QLDDAYTLTMKARKRGYI---LDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATII 527

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           TYN +I GLC  G+ D+A D   ++ E  + P+      +IHG+       K  +  +KM
Sbjct: 528 TYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKM 587

Query: 358 KEKKVMPD 365
            E  + PD
Sbjct: 588 VEHSLKPD 595



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 196/367 (53%), Gaps = 2/367 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           ++GV  +PN  T+N +I G C +   ++A  L  QM      PD VTYN+++  LC  + 
Sbjct: 204 KLGV--QPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQ 261

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             + + L  +M + G+ P+  T+N+++   CK   + EA+ +++LM  + + P+ +TY+T
Sbjct: 262 LTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNT 321

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ G C  GKI+ A  L   MES     D V+YN LI+G  +++  + A  L  EM ++G
Sbjct: 322 MVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARG 381

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +K   VT+N +        +++ A  +  +M     + D  TYNT I+G CK G + EA 
Sbjct: 382 VKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAY 441

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           ++   +G    +LD    N L+  +C   +L+ A  L     +R  + D VTY  +I G 
Sbjct: 442 KMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGY 501

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             D Q D+A  L+ +M+E  +   +I + T+I G     K  + ++ L+++ EK ++PD 
Sbjct: 502 FKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDE 561

Query: 367 SIVSMVV 373
           S  ++++
Sbjct: 562 STSNIII 568



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 178/347 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+IDG  +    D A  L  +MK   +  + VT+N +I   C     +EA  +
Sbjct: 349 PDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNV 408

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M++ G  P   T+N +++  CK GKM EA +++D M ++ ++ + FT +TL+   CL
Sbjct: 409 MVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCL 468

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +++ A  L       G   D+V+Y  LI GY K+++ + AL L+ EM   GI  T++T
Sbjct: 469 EKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIIT 528

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+  GL    + + A+    E+    +  D ST N  I G C  G + +A +    + 
Sbjct: 529 YNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMV 588

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + DI   N L+ GLC+ G LE  L LF +   +    D VTYNI+I   C + +++
Sbjct: 589 EHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLE 648

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            A DL  +ME   + P+   +  ++ G  +  +  +  +L  K  EK
Sbjct: 649 DAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEK 695



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 187/371 (50%), Gaps = 40/371 (10%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNE---AKRLFFEMMDQGVQPSVVTFNVIMD 94
           +F +MK     P+++T N+L++ L  +N  +    ++ +F + +  GVQP+V TFN+++ 
Sbjct: 160 IFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIH 219

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
             C +   +EA RL++ M +    P+  TY+T++   C   ++ +  +L   M++ G   
Sbjct: 220 GYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFP 279

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           +  +YNIL++GYCK K ++EA  +   M  KG+ P V TYNT+  GL +  +++ A++L 
Sbjct: 280 NRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLR 339

Query: 215 EEMQRDDVAADTSTYNTFIDG-----------------------------------LCKN 239
           ++M+   +  D  TYNT IDG                                    C  
Sbjct: 340 DKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTE 399

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G I EA  +   +       D   YN +I+G CK+G++  A ++   + R+ L  D  T 
Sbjct: 400 GKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTL 459

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           N ++H +C + Q+D A+ L +   +     + + + TLI G+ +  +  + ++L  +MKE
Sbjct: 460 NTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKE 519

Query: 360 KKVMPDASIVS 370
             ++  A+I++
Sbjct: 520 TGIV--ATIIT 528



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 171/388 (44%), Gaps = 46/388 (11%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N VT+N +I   C EG +D+A  + ++M     +PD  TYN++I+G C A    EA +
Sbjct: 383 KENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYK 442

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELC----------------------------------- 97
           +  EM  +G++    T N ++  +C                                   
Sbjct: 443 MMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYF 502

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K+ + D A +L + M +  +     TY+T++ G CL+GK ++A +    +   G   D+ 
Sbjct: 503 KDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDES 562

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           + NI+I+GYC    VE+A   + +MV   +KP + T N L  GL     +E  L LF   
Sbjct: 563 TSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTW 622

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
                  DT TYN  I   CK   + +A +L   +     E D   YN ++ GL K+GR 
Sbjct: 623 ISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRT 682

Query: 278 EIALEL---FRSLPRRVLVADV--------VTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           E A +L   F    ++V   D         + Y+  I  LC  G+   A  LF   E+  
Sbjct: 683 EEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKG 742

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELL 354
           V+ N   ++ L+ G ++  K      LL
Sbjct: 743 VSLNKYTYIKLMDGLLKRRKSFTTTSLL 770



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 142/301 (47%), Gaps = 44/301 (14%)

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR---AEELFGSMESMGCKHDDVSYNILI 163
           ++ + M +   RPN  T +TL++    +   +    + E+F     +G + +  ++NILI
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILI 218

Query: 164 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVA 223
           +GYC +   EEAL L  +M   G  P  VTYNT+   L +  Q+     L  +M+   + 
Sbjct: 219 HGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLF 278

Query: 224 ADTSTYNTFIDGLCKNGYIVEA---VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            + +TYN  + G CK  ++ EA   +EL    G+L    D+  YN ++ GLC  G+++ A
Sbjct: 279 PNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLP---DVWTYNTMVRGLCDEGKIDEA 335

Query: 281 LELFRSLPRRVLVADVVTYN-----------------------------------IMIHG 305
           + L   +    LV DVVTYN                                   IMI  
Sbjct: 336 VRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKW 395

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            C +G++D+A ++ + M E+  +P+   + T+I+G+ +  K ++  +++ +M  K +  D
Sbjct: 396 FCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLD 455

Query: 366 A 366
            
Sbjct: 456 T 456



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 13/208 (6%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E G+V  P+  T N II G C EG V+KA     +M   ++ PD+ T N L+ GLC    
Sbjct: 554 EKGLV--PDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGM 611

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +   LF   + +G     VT+N+I+   CK  ++++A  L+  M  +++ P+ +TY+ 
Sbjct: 612 LEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNA 671

Query: 127 LMDGFCLTGKINRAEELFGSMESMG--CKHDDVS---------YNILINGYCKNKEVEEA 175
           ++ G    G+   AE+L       G   K  D S         Y+  I+  C   + ++A
Sbjct: 672 IVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDA 731

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFE 203
           + L+++   KG+     TY  L  GL +
Sbjct: 732 MKLFQQAEQKGVSLNKYTYIKLMDGLLK 759



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 3/215 (1%)

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI---HQVEHALKLFEEMQR 219
           +  Y  +K+      ++ +M     +P ++T NTL   L      H +  + ++F++  +
Sbjct: 145 LAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVK 204

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
             V  + +T+N  I G C +    EA+ L   +G   C  D   YN ++  LCK  +L  
Sbjct: 205 LGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQ 264

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
             +L   +    L  +  TYNI++HG C    + +A ++   M    + P+V  + T++ 
Sbjct: 265 VRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVR 324

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           G     K  + + L  KM+  K++PD    + ++D
Sbjct: 325 GLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLID 359



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFL-------QMKGENINPDVVT----YNSLIHGL 61
           +P+  TYN I+ GL K G  ++A+ L L       Q+K ++ +P++ T    Y+  I  L
Sbjct: 663 EPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSL 722

Query: 62  CHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR 118
           C    + +A +LF +   +GV  +  T+  +MD L K  K    + LL  MV   ++
Sbjct: 723 CTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLLPFMVSATIQ 779



 Score = 38.9 bits (89), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 3/106 (2%)

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK---AHDLFLDMEENAVAPN 330
           S +  +  ++F  + R     +++T N +++ L           + ++F D  +  V PN
Sbjct: 151 SKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPN 210

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           V  F  LIHG+   N   + + L+++M E    PD    + V+  L
Sbjct: 211 VNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTAL 256


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 203/381 (53%), Gaps = 23/381 (6%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + VTYNT+I G C++G VD+   L  +M    +  D +T N L+ G C       A+ + 
Sbjct: 161 DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVM 220

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
           + ++D GV   V+  N ++D  C+ G M +A+ L++   + DV+ +  TY+TL+  FC T
Sbjct: 221 YNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKT 280

Query: 135 GKINRAEELFGSMESMGCKHDD---------------------VSYNILINGYCKNKEVE 173
           G + RAE LF   E +G   D+                     V+Y  LI  YCK   VE
Sbjct: 281 GDLTRAESLFN--EILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVE 338

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           E+ SLY++M+  GI P VVT +++  G     ++  A  LF EM    +  +  +Y T I
Sbjct: 339 ESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATII 398

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
           + L K+G ++EA  L   + +     DI     ++DGL K G+ + A E+F ++ +  L 
Sbjct: 399 NSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLA 458

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            + VTY+ ++ G C  G+M+ A  +   ME+  V PNVI F ++I+G+ +    SK +++
Sbjct: 459 PNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDV 518

Query: 354 LHKMKEKKVMPDASIVSMVVD 374
           L +M ++ VMP+  + ++++D
Sbjct: 519 LREMVQRNVMPNTIVYAILID 539



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 190/360 (52%), Gaps = 1/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT ++I+ G C+ G + +A  LF +M    ++P+ V+Y ++I+ L  +    EA  L
Sbjct: 354 PDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNL 413

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+ +G+   +VT   +MD L K GK  EA  + + +++ ++ PN  TYS L+DG+C 
Sbjct: 414 QSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCK 473

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  AE +   ME      + ++++ +INGY K   + +A+ + REMV + + P  + 
Sbjct: 474 LGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIV 533

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G F+  + + A    +EM+   +      ++  ++ L + G + EA  L   + 
Sbjct: 534 YAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMY 593

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + DI  Y  LIDG  K G    AL + + +  + +  DVV YN +I GL   G+ D
Sbjct: 594 SKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD 653

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
             + +   M E  +AP+ I + T+I+ +    K    +++L++MK   +MP+A   ++++
Sbjct: 654 PRY-VCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILI 712



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 182/357 (50%), Gaps = 5/357 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V Y ++IDG  KEG    A ++  +MK +NI  DVV YN+LI GL     + + + +
Sbjct: 599 PDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYV 657

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M++ G+ P  +T+N I++  C  GK ++A  +L+ M    + PNA TY+ L+ G C 
Sbjct: 658 CSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCK 717

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG + +AE     M  M      +++  L+  Y ++++ ++ L ++ ++V+ G++ ++  
Sbjct: 718 TGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTV 777

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL      +     A  + +EM +  ++AD  TYN  I G C   ++ +A++ +  + 
Sbjct: 778 YNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMF 837

Query: 254 ILKCELDIQAYNCLIDGLCKSG----RLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           +     +I  YN L+ GL  +G     +E   +L   +  R LV +  TY+I++ G    
Sbjct: 838 VDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRV 897

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           G   K   L ++M      P +  +  LI  + +  K  +  ELL+ +  K  +P++
Sbjct: 898 GNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNS 954



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 151/310 (48%), Gaps = 14/310 (4%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+G+   P+ +TYNTII+  C +G  + A  +  +MK   I P+ VTYN LI GLC    
Sbjct: 663 ELGLA--PDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGA 720

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A+    EM+     P+ +T   ++    ++ K D+  ++ + +V   +  +   Y+T
Sbjct: 721 VEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNT 780

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+  FC  G   +A+ +   M   G   D V+YN LI GYC    VE+AL  Y +M   G
Sbjct: 781 LITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDG 840

Query: 187 IKPTVVTYNTLFLGL----FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG-- 240
           I P + TYNTL  GL         +E   KL  EM    +  + +TY+  + G  + G  
Sbjct: 841 IAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNR 900

Query: 241 --YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
              I+  +E+  T G +     ++ YN LI    KSG++  A EL   L  +  + +  T
Sbjct: 901 KKTIILHIEMI-TKGFVPT---LKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFT 956

Query: 299 YNIMIHGLCN 308
           Y+I+  G  N
Sbjct: 957 YDILTCGWLN 966



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 169/360 (46%), Gaps = 23/360 (6%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
           A A F  M+   + P +  +N+L++    +   ++ K ++ +M+  GV P V + NV++ 
Sbjct: 78  ASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVH 137

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRP-NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCK 153
            LCK G +D A   L  +   DV   +  TY+T++ GFC  G +++   L   M   G  
Sbjct: 138 SLCKVGDLDLA---LGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLC 194

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            D ++ NIL+ GYC+   V+ A  +   +V  G+   V+  NTL  G  E   +  A +L
Sbjct: 195 FDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATEL 254

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF-RTLGILKCELDIQ---------- 262
            E   R DV  D  TYNT +   CK G +  A  LF   LG  K E  ++          
Sbjct: 255 IENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEI 314

Query: 263 --------AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                    Y  LI   CK   +E +  L++ +    ++ DVVT + +++G C  G++ +
Sbjct: 315 KNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTE 374

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  LF +M E  + PN + + T+I+   +  +  +   L  +M  + +  D    + V+D
Sbjct: 375 AAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 39/267 (14%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVT-------------------- 53
           PN VTYN +I GLCK G V+KA++   +M      P  +T                    
Sbjct: 703 PNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQI 762

Query: 54  ---------------YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                          YN+LI   C      +AK +  EM+ +G+   +VT+N ++   C 
Sbjct: 763 HEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCT 822

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG----KINRAEELFGSMESMGCKH 154
              +++A +    M    + PN  TY+TL+ G    G     +   E+L   M   G   
Sbjct: 823 GSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVP 882

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           +  +Y+IL++GY +    ++ + L+ EM++KG  PT+ TYN L     +  ++  A +L 
Sbjct: 883 NAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELL 942

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGY 241
            ++       ++ TY+    G     Y
Sbjct: 943 NDLLTKGRIPNSFTYDILTCGWLNLSY 969



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 2/204 (0%)

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LI  Y  +     A + +  M + G+ PT+  +NTL         V     ++ +M    
Sbjct: 65  LIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCG 124

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           V  D  + N  +  LCK G +  A+   R   ++  ++D   YN +I G C+ G ++   
Sbjct: 125 VVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVV--DIDNVTYNTVIWGFCQKGLVDQGF 182

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            L   + +R L  D +T NI++ G C  G +  A  +  ++ +  V  +VI   TLI G+
Sbjct: 183 GLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGY 242

Query: 342 VRINKPSKVIELLHKMKEKKVMPD 365
                 S+  EL+       V  D
Sbjct: 243 CEAGLMSQATELIENSWRSDVKID 266


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 119/363 (32%), Positives = 186/363 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+N ++ GLCK G V  A   F          D+ TY +++  L       +A  L
Sbjct: 128 PSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVAL 187

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++   G  P++ T+N +++ LCK G+++EA  LL  +V     P+  TY++L+DG   
Sbjct: 188 MEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 247

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +   A +LF  M   G   D V Y  LI G  +  ++ +A S+Y+ M S+G  P VVT
Sbjct: 248 EKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVT 307

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            +T+  GL +  ++  A+++F+ M+   +A +   Y+  I GLCK   +  A+E+   + 
Sbjct: 308 LSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 367

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D   YN LIDGLCKSG +E A   F  +       DV TYNI++ G C  G  D
Sbjct: 368 KAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTD 427

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  +F DM  +  +PNV+ + TLI G  +  + +K       MKE+   PD+ + S +V
Sbjct: 428 AACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLV 487

Query: 374 DLL 376
           D L
Sbjct: 488 DGL 490



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 183/364 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +  TY  I+D L K   +  A AL  ++      P + TYN+L++GLC      EA 
Sbjct: 161 CTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 220

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +++D G  P VVT+  ++D L K  +  EA +L   M  R +  +   Y+ L+ G 
Sbjct: 221 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGL 280

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GKI +A  ++ +M S GC  D V+ + +I+G CK   +  A+ +++ M ++G+ P  
Sbjct: 281 LQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNE 340

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V Y+ L  GL +  +++ AL++  +M++     DT TYN  IDGLCK+G +  A   F  
Sbjct: 341 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 400

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ D+  YN L+ G CK+G  + A  +F  +       +VVTY  +I GLC   Q
Sbjct: 401 MLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQ 460

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + KA   F  M+E    P+  ++ +L+ G  +  K      L  +M+   V    +   +
Sbjct: 461 LTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRL 520

Query: 372 VVDL 375
           +  L
Sbjct: 521 IFHL 524



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/366 (32%), Positives = 185/366 (50%), Gaps = 6/366 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P   TYN +++GLCK G +++A  L  ++      PDVVTY SLI GL       EA 
Sbjct: 196 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 255

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +LF EM  +G+    V +  ++  L + GK+ +AS +   M  +   P+  T ST++DG 
Sbjct: 256 KLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGL 315

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+I  A  +F SME+ G   ++V Y+ LI+G CK ++++ AL +  +M      P  
Sbjct: 316 CKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 375

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYN L  GL +   VE A   F+EM       D  TYN  + G CK G    A  +F  
Sbjct: 376 ITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDD 435

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  ++  Y  LI GLCK  +L  A   F+ +  R    D   Y+ ++ GLC  G+
Sbjct: 436 MSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGK 495

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA----S 367
           ++    LF +ME + VA N      LI    + N+  + + L + ++ K+ MP      S
Sbjct: 496 LEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIR-KEGMPHPYAYNS 553

Query: 368 IVSMVV 373
           I+S ++
Sbjct: 554 IISTLI 559



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/327 (33%), Positives = 167/327 (51%), Gaps = 1/327 (0%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASR 107
           PDV T+N LI G C A +  EA  +  EM  D GV PS+ T N+++  LCK+GK+  A  
Sbjct: 92  PDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMD 151

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
             +         +  TY+ ++D      KI  A  L   + + GC     +YN L+NG C
Sbjct: 152 HFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLC 211

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           K   +EEA+ L R++V  G  P VVTY +L  GL +  +   A KLF+EM    +  DT 
Sbjct: 212 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTV 271

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
            Y   I GL + G I +A  +++T+    C  D+   + +IDGLCK+GR+  A+ +F+S+
Sbjct: 272 CYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM 331

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
             R L  + V Y+ +IHGLC   +MD A ++   M++    P+ I +  LI G  +    
Sbjct: 332 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 391

Query: 348 SKVIELLHKMKEKKVMPDASIVSMVVD 374
                   +M E    PD    +++V 
Sbjct: 392 EAARAFFDEMLEAGCKPDVYTYNILVS 418



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 173/328 (52%), Gaps = 1/328 (0%)

Query: 50  DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
            V T N+L+          EA  L    +     P V T+NV++   C   + +EA  ++
Sbjct: 58  SVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVI 117

Query: 110 DLMVQ-RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
             M +   V P+  T++ ++ G C +GK+  A + F +  + GC  D  +Y  +++   K
Sbjct: 118 REMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAK 177

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
           NK++++A++L  ++ + G  PT+ TYN L  GL ++ ++E A+ L  ++  +    D  T
Sbjct: 178 NKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVT 237

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           Y + IDGL K     EA +LF+ + +    LD   Y  LI GL ++G++  A  +++++ 
Sbjct: 238 YTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMT 297

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
            +  V DVVT + MI GLC  G++  A  +F  ME   +APN +++  LIHG  +  K  
Sbjct: 298 SQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 357

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +E+L +MK+    PD    ++++D L
Sbjct: 358 CALEMLAQMKKAFCTPDTITYNILIDGL 385



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 117/229 (51%), Gaps = 3/229 (1%)

Query: 140 AEELFGSMES--MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           A ELF  + S   G +H   + N L++ + + K   EA +L +  ++    P V T+N L
Sbjct: 41  AWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVL 100

Query: 198 FLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
             G     + E A  +  EM+ D  VA    T+N  + GLCK+G ++ A++ F T     
Sbjct: 101 ITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNG 160

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
           C +DI  Y  ++D L K+ +++ A+ L   +        + TYN +++GLC  G++++A 
Sbjct: 161 CTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 220

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           DL   + +N   P+V+ + +LI G  +  +  +  +L  +M  + ++ D
Sbjct: 221 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLD 269


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 115/332 (34%), Positives = 184/332 (55%), Gaps = 3/332 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDK---AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           P+ VTYNTIIDG CK G   +     AL  +M    I+P+ VT+N L++G C  ++   A
Sbjct: 218 PSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAA 277

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            R+F EM  QG+  SVVT++ ++  LC  GK++E  +L+D M    + PN  T +++++G
Sbjct: 278 VRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNG 337

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC  G +  AE    SME    K + V+Y IL++GY +  ++++AL++   M  KG++P 
Sbjct: 338 FCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPN 397

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
              YN L  G            L +EM+   V AD  TYN  I  LC  G + +AV+L  
Sbjct: 398 ARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLD 457

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            + ++  E     YN +I+G C+ G ++ A E+   + +    A+VVTYN+ I  LC  G
Sbjct: 458 EMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMG 517

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           +M++ ++L  +M E  + PN + + T+  G +
Sbjct: 518 KMEETNELLNEMLEKGLVPNGVTYDTIKEGMM 549



 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 176/356 (49%), Gaps = 3/356 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC---HANDWNEA 70
           P+  T+N +I GLCK G + KA  +   ++   + P VVTYN++I G C    A      
Sbjct: 183 PDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHV 242

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             L  EM++ G+ P+ VTFNV+++  CK+     A R+ + M Q+ +  +  TYS L+ G
Sbjct: 243 DALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWG 302

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  GK+    +L   M+ +G   +  + N ++NG+CK   + +A      M  K +KP 
Sbjct: 303 LCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPN 362

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY  L  G   + +++ AL + E M    V  +   YN  I G  +NG       L  
Sbjct: 363 VVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLD 422

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            + +     DI  YN LI  LC  G +  A++L   +    L    +TYN +I+G C  G
Sbjct: 423 EMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKG 482

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            +  A+++   ME+     NV+ +   I    R+ K  +  ELL++M EK ++P+ 
Sbjct: 483 NIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNG 538



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 157/297 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VT+N +++G CK+     A  +F +MK + I   VVTY++L+ GLC      E  +L
Sbjct: 256 PNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKL 315

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM D G+ P++ T N +++  CK G M +A   +D M Q++V+PN  TY+ L+DG+  
Sbjct: 316 VDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRR 375

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+  A  +  +M   G + +   YN LI G+ +N +      L  EM  KG++  +VT
Sbjct: 376 LDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVT 435

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L   L    +V  A+KL +EM    +     TYNT I+G C+ G I  A E+   + 
Sbjct: 436 YNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRME 495

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             K   ++  YN  I  LC+ G++E   EL   +  + LV + VTY+ +  G+   G
Sbjct: 496 KGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKG 552



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 171/352 (48%), Gaps = 38/352 (10%)

Query: 48  NPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR 107
            P   + N L+  L  A   + A+R F   + + V P + TFN+++  LCK G++ +A  
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR---AEELFGSMESMGCKHDDVSYNILIN 164
           +   +    + P+  TY+T++DG+C  G+  R    + L   M   G   ++V++N+L+N
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVN 266

Query: 165 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAA 224
           GYCK+     A+ ++ EM  +GI  +VVTY+ L  GL    +VE  +KL +EM+   +  
Sbjct: 267 GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVP 326

Query: 225 DTSTYNTFIDGLCKNGYIVEA----------------------VELFRTLGILKCELDIQ 262
           + +T N+ ++G CK G + +A                      V+ +R L  +K  L ++
Sbjct: 327 NLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVK 386

Query: 263 A-------------YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
                         YNCLI G  ++G       L   +  + + AD+VTYN++I  LC  
Sbjct: 387 EAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVK 446

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           G++ KA  L  +M    + P  + + T+I+G+          E+  +M++ K
Sbjct: 447 GEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGK 498



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 143/286 (50%), Gaps = 3/286 (1%)

Query: 83  QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEE 142
           +PS  + N ++  L    ++D A R     ++R V P+ FT++ ++ G C TG++ +A +
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206

Query: 143 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL---SLYREMVSKGIKPTVVTYNTLFL 199
           +   + + G     V+YN +I+GYCK           +L +EMV  GI P  VT+N L  
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVN 266

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           G  +      A+++FEEM++  +AA   TY+  + GLC  G + E V+L   +  L    
Sbjct: 267 GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVP 326

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           ++   N +++G CK G +  A     S+ ++ +  +VVTY I++ G     +M  A  + 
Sbjct: 327 NLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVK 386

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             M    V PN  I+  LI GF R      V  LL +M+ K V  D
Sbjct: 387 EAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRAD 432



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 123/235 (52%), Gaps = 2/235 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           ++G+V  PN  T N++++G CK+G +  A+     M+ +N+ P+VVTY  L+ G    + 
Sbjct: 321 DLGLV--PNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDK 378

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A  +   M  +GV+P+   +N ++    +NG     S LLD M  + VR +  TY+ 
Sbjct: 379 MKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNV 438

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+   C+ G++ +A +L   M  +G +   ++YN +INGYC+   ++ A  +   M    
Sbjct: 439 LIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGK 498

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
            +  VVTYN     L  + ++E   +L  EM    +  +  TY+T  +G+ + GY
Sbjct: 499 KRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGY 553


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 123/361 (34%), Positives = 188/361 (52%), Gaps = 2/361 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VTYNT++D  CKEG VD+A  L  +M+     P+ VTYN L++GL    +  +AK 
Sbjct: 212 KPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKG 271

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM++ G+  S  T+N +++  C+ G   EA  L++ MV R   P   TY+TLM G C
Sbjct: 272 LIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLC 331

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++      F  M       D VS+N L+ GYC+   + EA  L+ E+  + + PTV+
Sbjct: 332 KWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVI 391

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GL     ++ AL+L +EM    +  D  TY   ++G  K GY+  A   F  +
Sbjct: 392 TYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEM 451

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D  AYN  I G  K     +A  +   +       DV+TYN+ +H LC  G  
Sbjct: 452 LSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNF 511

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A DL  +M  + + P+ + + ++I+GFV+     K  E+ ++M  K V P  S+V+  
Sbjct: 512 EEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAP--SVVTYT 569

Query: 373 V 373
           V
Sbjct: 570 V 570



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 181/353 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TYNT++ GLCK   V   +  F  M      PD+V++NSL++G C     +EA  L
Sbjct: 318 PTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLL 377

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E+  + + P+V+T+N ++  LC  G +D A RL   M  + + P+ FTY+ L++G   
Sbjct: 378 FDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFK 437

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A   F  M S G K D  +YN  I G  K  +   A S+  EM++ G  P V+T
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVIT 497

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN     L +    E A  L E M  D +  D  TY + I+G  KNG++ +A E+F  + 
Sbjct: 498 YNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEML 557

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  +  Y  LI        L++A   F  +  + + A+V+TYN +I+GLC   +MD
Sbjct: 558 SKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMD 617

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +A+  F +MEE  + PN   +  LI+    +    + + L  +M ++K+ PD+
Sbjct: 618 EAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDS 670



 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 176/357 (49%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TYN +I+G C++G   +A  L  +M      P + TYN+L++GLC        +  F +M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +     P +V+FN ++   C+ G + EA  L D +  RD+ P   TY+TL+ G C+ G +
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  L   M   G   D  +Y IL+NG  K   V  A   + EM+SKG+KP    YNT 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
            +G  +I     A  + EEM       D  TYN F+  LC+ G   EA +L   +     
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D   Y  +I+G  K+G L  A E+F  +  + +   VVTY ++IH       +D A  
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFM 586

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            F  M E +V  NVI +  +I+G     +  +  +   +M+EK ++P+    +++++
Sbjct: 587 YFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILIN 643



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 169/339 (49%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           +F +M    + PDV   N ++  L   N  ++AK ++  M   G++P+VVT+N ++D  C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K G++D+A  LL  M +R   PN  TY+ L++G    G++ +A+ L   M + G      
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +YN LING+C+     EA  L  EMV++   PT+ TYNTL  GL +  QV      F +M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
            +     D  ++N+ + G C+ G I EA  LF  L        +  YN LI GLC  G L
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + AL L + +  + L  D+ TY I+++G    G +  A   F +M    + P+   + T 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           I G ++I   S    +  +M      PD    ++ V  L
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 135/258 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY  +++G  K G+V  A+  F +M  + + PD   YN+ I G     D + A  +
Sbjct: 423 PDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSM 482

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+  G  P V+T+NV +  LC+ G  +EA  LL+ MV   + P+  TY+++++GF  
Sbjct: 483 QEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVK 542

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G + +A E+F  M S G     V+Y +LI+ +   + ++ A   + +M+ K +   V+T
Sbjct: 543 NGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVIT 602

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GL    +++ A K F+EM+   +  +  +Y   I+  C  GY  EA+ L+R + 
Sbjct: 603 YNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREML 662

Query: 254 ILKCELDIQAYNCLIDGL 271
             K + D   ++  +  L
Sbjct: 663 DRKIQPDSFTHSVFLKNL 680



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 117/240 (48%), Gaps = 1/240 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+   YNT I G  K      A ++  +M      PDV+TYN  +H LC   ++ EA  
Sbjct: 457 KPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACD 516

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+  G+ P  VT+  I++   KNG + +A  + + M+ + V P+  TY+ L+    
Sbjct: 517 LLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHA 576

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               ++ A   F  M       + ++YN +ING C  + ++EA   + EM  KGI P   
Sbjct: 577 AKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKF 636

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y  L      +   E AL+L+ EM    +  D+ T++ F+  L ++ Y V AV+   +L
Sbjct: 637 SYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRD-YQVHAVQCVESL 695



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 9/255 (3%)

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
           +M Q D + + F +  ++D   L G  +     +  ME +         ++LI G+    
Sbjct: 109 VMAQPDFKESEFVFCAILD--ILVGN-DLMHAAYWVMERVVSFEMHGVVDVLIAGHVX-- 163

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
                L ++ +M+  G+ P V   N +   L + + +  A  ++  M++  +     TYN
Sbjct: 164 ----CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYN 219

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           T +D  CK G + +A+EL   +    C  +   YN L++GL K G LE A  L   +   
Sbjct: 220 TMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNS 279

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
            L     TYN +I+G C  G   +A DL  +M      P +  + TL++G  +  + + V
Sbjct: 280 GLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGV 339

Query: 351 IELLHKMKEKKVMPD 365
                 M + K  PD
Sbjct: 340 RLRFSDMLKSKFTPD 354



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 78/157 (49%)

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           L +F++M R+ +  D    N  +  L     + +A  ++  +     +  +  YN ++D 
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
            CK GR++ ALEL   +  R    + VTYN++++GL   G++++A  L  +M  + +  +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
              +  LI+GF +     +  +L+ +M  ++  P  S
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLS 321



 Score = 41.2 bits (95), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 22/94 (23%), Positives = 52/94 (55%)

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           L +F  + R  L+ DV   N ++  L ++  + KA +++  ME+  + P V+ + T++  
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + +  +  + +ELL +M+E+   P+    +++V+
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVN 258


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/363 (33%), Positives = 184/363 (50%), Gaps = 1/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY ++I G C+   +D A  +F +M  +    + V Y  LIHGLC A   +EA  L
Sbjct: 251 PDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDL 310

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M D    P+V T+ V++  LC + +  EA  L+  M +  ++PN  TY+ L+D  C 
Sbjct: 311 FVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCS 370

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K  +A EL G M   G   + ++YN LINGYCK   +E+A+ +   M S+ + P   T
Sbjct: 371 QCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRT 430

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +   V  A+ +  +M    V  D  TYN+ IDG C++G    A  L   + 
Sbjct: 431 YNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D   Y  +ID LCKS R+E A +LF SL ++ +  +VV Y  +I G C  G++D
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +AH +   M      PN + F  LIHG     K  +   L  KM +  + P  S  ++++
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609

Query: 374 DLL 376
             L
Sbjct: 610 HRL 612



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/356 (33%), Positives = 188/356 (52%), Gaps = 2/356 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC PN  TYN +++G CK G V++A     ++    ++PD  TY SLI G C   D + A
Sbjct: 214 VC-PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSA 272

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            ++F EM  +G + + V +  ++  LC   ++DEA  L   M   +  P   TY+ L+  
Sbjct: 273 FKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKS 332

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C + + + A  L   ME  G K +  +Y +LI+  C   + E+A  L  +M+ KG+ P 
Sbjct: 333 LCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPN 392

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V+TYN L  G  +   +E A+ + E M+   ++ +T TYN  I G CK+  + +A+ +  
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLN 451

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +   K   D+  YN LIDG C+SG  + A  L   +  R LV D  TY  MI  LC   
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSK 511

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           ++++A DLF  +E+  V PNV+++  LI G+ +  K  +   +L KM  K  +P++
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 187/396 (47%), Gaps = 34/396 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N V Y  +I GLC    +D+A  LF++MK +   P V TY  LI  LC +   +EA 
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL 343

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM + G++P++ T+ V++D LC   K ++A  LL  M+++ + PN  TY+ L++G+
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403

Query: 132 CLTGKINRAEELFGSMESMG---------------CKH-------------------DDV 157
           C  G I  A ++   MES                 CK                    D V
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVV 463

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +YN LI+G C++   + A  L   M  +G+ P   TY ++   L +  +VE A  LF+ +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
           ++  V  +   Y   IDG CK G + EA  +   +    C  +   +N LI GLC  G+L
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A  L   + +  L   V T  I+IH L  DG  D A+  F  M  +   P+   + T 
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           I  + R  +     +++ KM+E  V PD    S ++
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 177/349 (50%), Gaps = 19/349 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNT TYN +I G CK   V KA  +  +M    + PDVVTYNSLI G C + +++ A RL
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M D+G+ P   T+  ++D LCK+ +++EA  L D + Q+ V PN   Y+ L+DG+C 
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A  +   M S  C  + +++N LI+G C + +++EA  L  +MV  G++PTV T
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
              L   L +    +HA   F++M       D  TY TFI   C+ G +++A ++   + 
Sbjct: 605 DTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR 664

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL------PRRVLVADVVTYNI-MIHG- 305
                 D+  Y+ LI G    G+   A ++ + +      P +     ++ + + M +G 
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGK 724

Query: 306 -------LC---NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
                  LC   N  + D   +L   M E++V PN   +  LI G   +
Sbjct: 725 QKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV 773



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 164/348 (47%), Gaps = 19/348 (5%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN++T+N +I GLC +G + +A  L  +M    + P V T   LIH L    D++ A 
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             F +M+  G +P   T+   +   C+ G++ +A  ++  M +  V P+ FTYS+L+ G+
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILIN-----GYCKNK-------------EVE 173
              G+ N A ++   M   GC+    ++  LI       Y K K             E +
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD-VAADTSTYNTF 232
             + L  +MV   + P   +Y  L LG+ E+  +  A K+F+ MQR++ ++     +N  
Sbjct: 743 TVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           +   CK     EA ++   +  +     +++   LI GL K G  E    +F++L +   
Sbjct: 803 LSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGY 862

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
             D + + I+I G+   G ++  ++LF  ME+N    +   +  LI G
Sbjct: 863 YEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 92/183 (50%)

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL   L     V+   +++ EM  D V  +  TYN  ++G CK G + EA +    + 
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D   Y  LI G C+   L+ A ++F  +P +    + V Y  +IHGLC   ++D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A DLF+ M+++   P V  +  LI       + S+ + L+ +M+E  + P+    ++++
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 374 DLL 376
           D L
Sbjct: 366 DSL 368


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 195/438 (44%), Gaps = 74/438 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ +T+  +IDGLCK G  ++A   F +M      P+VVTY ++I GL        A R
Sbjct: 362 RPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFR 421

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M+  G  P  VT+  ++D  CK G++DEA++LLD + +    PN   YS+L+ G C
Sbjct: 422 IMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLC 481

Query: 133 ------------------------------------LTGKINRAEELFGSMESMGCKHDD 156
                                                TG+++ A  +F  M S GCK D 
Sbjct: 482 DGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDA 541

Query: 157 VSYNILINGYCKNKE--VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
            +YNILING C+++E  VE A +L  ++   G  P  VTY  L +GL +I +V+ A+K+ 
Sbjct: 542 TTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKML 601

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           EE       AD   Y     GLC  G +  AV LF+ +       D  AY C+I+GL K 
Sbjct: 602 EEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKG 661

Query: 275 GRLEIALELFRS------------------------------------LPRRVLVADVVT 298
            +LE A + F                                      L R  LV  V+ 
Sbjct: 662 KKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMI 721

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y+ +IHG C   ++D A  LF DM      P  +   +L  G VR  K  K  ELL +M 
Sbjct: 722 YDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMA 781

Query: 359 EKKVMPDASIVSMVVDLL 376
                P A+  + ++D L
Sbjct: 782 AGGSPPHAATFTAILDGL 799



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 193/404 (47%), Gaps = 38/404 (9%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
            C P  VTY  +++ LCK G +++A+ LF  M      P+ V Y SLIHG   +    EA
Sbjct: 290 ACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEA 349

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             LF EM++ G +P V+T  V++D LCK+G  ++A++  + M++   +PN  TY+T++ G
Sbjct: 350 CSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQG 409

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               G++  A  +   M + GC  D V+Y  L++G+CK   ++EA  L  E+      P 
Sbjct: 410 LSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPN 469

Query: 191 VVTYNTLFLGLFEIHQVEHALK-LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           +  Y++L  GL +   VE+ L  LFE+ +      D     + I GLCK G + EA  +F
Sbjct: 470 LQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIF 529

Query: 250 RTLGILKCELDIQAYNCLIDGLCKS----------------------------------- 274
           + +    C+ D   YN LI+GLC+S                                   
Sbjct: 530 QRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLC 589

Query: 275 --GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
             G ++ A+++      R   ADVV Y  +  GLC  GQ+D+A  LF +M     AP+  
Sbjct: 590 KIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAA 649

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +  +I+G ++  K     +   +M  K   P  +  + +V  L
Sbjct: 650 AYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQAL 693



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 188/367 (51%), Gaps = 2/367 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN-INPDVVTYNSLIHGLCHANDWNEA 70
           CKP+  T+  ++D LCK G  +KA  +F +M     + PD   + +++  L  A    EA
Sbjct: 185 CKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEA 244

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           + +F +M   G  P  + +N ++D L K G   EA ++LD M+ +   P   TY  L++ 
Sbjct: 245 REVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNS 304

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  G + RAEELF  M + G + + V Y  LI+G+ K+  ++EA SL+ EMV  G +P 
Sbjct: 305 LCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPD 364

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V+T+  +  GL +    E A K FEEM R     +  TY T I GL K G +  A  + +
Sbjct: 365 VITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMK 424

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C  D   Y CL+DG CK GRL+ A +L   L +     ++  Y+ ++ GLC+ G
Sbjct: 425 GMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGG 484

Query: 311 QMDKA-HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            ++    DLF   +  A   +  +  ++I G  +  +  +   +  +M  +   PDA+  
Sbjct: 485 SVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTY 544

Query: 370 SMVVDLL 376
           +++++ L
Sbjct: 545 NILINGL 551



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 180/350 (51%), Gaps = 10/350 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKA-KALFLQMKG--ENINPDVVTYNSLIHGLCHANDWNEA 70
           PN   Y++++ GLC  G V+     LF Q K   EN++P +    S+I GLC     +EA
Sbjct: 468 PNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCC--SIIVGLCKTGRLDEA 525

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKN--GKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            R+F  M+ +G +P   T+N++++ LC++   +++ A  LL  +      P+A TY+ L 
Sbjct: 526 CRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLC 585

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C  G+++RA ++     S G   D V+Y  L  G C   +V+ A+SL++EMV +G  
Sbjct: 586 IGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGA 645

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P    Y  +  GL +  ++E A K F+EM         +TY   +  LC  G + EA   
Sbjct: 646 PDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHR 705

Query: 249 FRTLGILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           F  + + + EL   +  Y+ LI G CK+ +++ AL+LF  +  R  V   VT   +  GL
Sbjct: 706 FEGM-LARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGL 764

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
              G+ +KA +L  +M      P+   F  ++ G  + ++  K+++L+ +
Sbjct: 765 VRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 158/331 (47%), Gaps = 3/331 (0%)

Query: 39  FLQMKGEN--INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
           F +  GE      DV TYN L++ L    ++++   +  EM+  G+ P+  +FN+++   
Sbjct: 105 FFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSF 164

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG-CKHD 155
            +  + D+A    ++M ++  +P+  T+  L+D  C  G   +A E+F  M +MG    D
Sbjct: 165 ARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPD 224

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
              +  ++    K K V+EA  ++ +M   G  P  + YNT+  GL +    + ALK+ +
Sbjct: 225 RALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLD 284

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
            M          TY   ++ LCK G +  A ELFR +       +   Y  LI G  KSG
Sbjct: 285 NMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSG 344

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           R++ A  LF  +       DV+T+ +MI GLC  G  ++A   F +M      PNV+ + 
Sbjct: 345 RMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYT 404

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           T+I G  +I + +    ++  M      PD+
Sbjct: 405 TIIQGLSKIGRVANAFRIMKGMIAHGCFPDS 435



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 2/204 (0%)

Query: 175 ALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           A+S +R    + G +  V TYN L   L           + EEM +  +A +T ++N  I
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILI 161

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
               +     +AV  F  +   +C+ D+  +  L+D LCK+G  E A E+F  +     V
Sbjct: 162 RSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFV 221

Query: 294 A-DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
             D   +  M+  L    ++ +A ++F  ME+    P+ I + T+I G  +     + ++
Sbjct: 222 PPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALK 281

Query: 353 LLHKMKEKKVMPDASIVSMVVDLL 376
           +L  M  K  +P      ++V+ L
Sbjct: 282 VLDNMLAKACVPTEVTYGILVNSL 305


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/362 (33%), Positives = 190/362 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY  +ID LC  G ++ AK LF++MK     PD V Y +L+       D +  K
Sbjct: 293 CGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFK 352

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             + +M   G  P VVTF +++D LCK    DEA    D+M ++ + PN  TY+TL+ G 
Sbjct: 353 EFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGL 412

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+I  A +L  +MES+G +    +Y   I+ + K+ E  +A+  + +M +KGI P +
Sbjct: 413 LRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNI 472

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V  N     L E+ ++  A  +F  ++ + +A D+ TYN  +    K G + EAV L   
Sbjct: 473 VACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSE 532

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    CE D+   N LID L K+GR++ A ++F  +    L   VVTYN ++ GL  +G+
Sbjct: 533 MIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGR 592

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + KA +LF  M     +PN I F TL+  F + ++    +++  KM      PD    + 
Sbjct: 593 VQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNT 652

Query: 372 VV 373
           V+
Sbjct: 653 VI 654



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 191/353 (54%), Gaps = 1/353 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V Y T++D     G +D  K  + QM+ +   PDVVT+  L+  LC A D++EA  
Sbjct: 329 KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFA 388

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F  M  QG+ P++ T+N ++  L + G++++A +LLD M    V+P A+TY T +D F 
Sbjct: 389 TFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFG 448

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G+  +A E F  M++ G   + V+ N  +    +   + EA +++  +   G+ P  V
Sbjct: 449 KSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSV 508

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN +     ++ QV+ A+ L  EM R+    D    N+ ID L K G + EA ++F  +
Sbjct: 509 TYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRM 568

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +K    +  YN L+ GL K GR++ A+ELF S+  +    + +++N ++   C + ++
Sbjct: 569 KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEV 628

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + A  +F  M      P+V+ + T+I+G ++ NK +      H++K K + PD
Sbjct: 629 ELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPD 680



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 181/352 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY+ ++  L K+   +    L  +M+   + P+V T+   I  L  A   +EA  
Sbjct: 224 KPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYE 283

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  M D+G  P +VT+ V++D LC  G+++ A  L   M     +P+   Y TL+D F 
Sbjct: 284 IFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFN 343

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++  +E +  ME+ G   D V++ IL++  CK ++ +EA + +  M  +GI P + 
Sbjct: 344 DFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLH 403

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GL    ++E ALKL + M+   V     TY TFID   K+G   +AVE F  +
Sbjct: 404 TYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKM 463

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +I A N  +  L + GRL  A  +F  L    L  D VTYN+M+      GQ+
Sbjct: 464 KAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQV 523

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           D+A +L  +M  N   P+VI+  +LI    +  +  +  ++  +MK+ K+ P
Sbjct: 524 DEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSP 575



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 183/367 (49%), Gaps = 3/367 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNT+++NT++D  CK   V+ A  +F +M   +  PDV+TYN++I+GL   N  N A 
Sbjct: 608 CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHA- 666

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA-SRLLDLMVQRDVRPNAFTYSTLMDG 130
             FF  + + + P  VT   ++  L K G++ +A S   D M Q   R N   +  LM G
Sbjct: 667 FWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGG 726

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKP 189
             +  ++++A      +   G   +D     L+   CK+K    A  ++ +   K GI P
Sbjct: 727 TLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISP 786

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           T+ +YN L   L E+H  E A  LF++M+    A D  T+N  +    K+G I E  EL+
Sbjct: 787 TLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELY 846

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + +   +C+ D   YN +I  L KS  L+ AL+ F  L          TY  +I GL   
Sbjct: 847 KEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKV 906

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++++A  LF +M +    PN  IF  LI+G+ +I       +L  +M  + + PD    
Sbjct: 907 GRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSY 966

Query: 370 SMVVDLL 376
           +++VD L
Sbjct: 967 TILVDCL 973



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 183/362 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  +YN +I  L + GF  +A  ++ +M  E + P + TY++L+  L    D      L 
Sbjct: 191 NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLL 250

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM D G++P+V TF + +  L + GK+DEA  +   M      P+  TY+ L+D  C  
Sbjct: 251 KEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNA 310

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G++  A+ELF  M++ G K D V Y  L++ +    +++     + +M + G  P VVT+
Sbjct: 311 GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTF 370

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L   L +    + A   F+ M++  +  +  TYNT I GL + G I +A++L  T+  
Sbjct: 371 TILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMES 430

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           +  +     Y   ID   KSG    A+E F  +  + +V ++V  N  ++ L   G++ +
Sbjct: 431 VGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLRE 490

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  +F  + EN +AP+ + +  ++  + ++ +  + + LL +M      PD  +V+ ++D
Sbjct: 491 AKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID 550

Query: 375 LL 376
            L
Sbjct: 551 SL 552



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 90/253 (35%), Positives = 137/253 (54%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            CKP+ +TYN +I  L K   +DKA   F  +   +  P   TY  LI GL       EA 
Sbjct: 854  CKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAM 913

Query: 72   RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            RLF EM D G +P+   FN++++   K G  + A +L   MV   +RP+  +Y+ L+D  
Sbjct: 914  RLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCL 973

Query: 132  CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            CL G+++ A   F  ++S G   D ++YN +ING  K++ +EEAL+LY EM ++GI P +
Sbjct: 974  CLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDL 1033

Query: 192  VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             TYN+L L L     VE A +++EE+Q   +  D  TYN  I G   +     A  +++ 
Sbjct: 1034 YTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKN 1093

Query: 252  LGILKCELDIQAY 264
            + +  C  +I  Y
Sbjct: 1094 MMVDGCNPNIGTY 1106



 Score =  165 bits (417), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 163/327 (49%), Gaps = 6/327 (1%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P   +YN +I  L +  + +KA  LF  MK     PD  T+N L+     +    E   L
Sbjct: 786  PTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFEL 845

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            + EM+ +  +P  +T+N+++  L K+  +D+A      +V  D RP   TY  L+DG   
Sbjct: 846  YKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAK 905

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             G++  A  LF  M   GCK +   +NILINGY K  + E A  L++ MV++GI+P + +
Sbjct: 906  VGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKS 965

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF---R 250
            Y  L   L    +V+ AL  F E++   +  D   YN  I+GL K+  + EA+ L+   R
Sbjct: 966  YTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMR 1025

Query: 251  TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
              GI+    D+  YN L+  L  +G +E A  ++  L    L  DV TYN +I G     
Sbjct: 1026 NRGIVP---DLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSE 1082

Query: 311  QMDKAHDLFLDMEENAVAPNVIIFVTL 337
              + A+ ++ +M  +   PN+  +  L
Sbjct: 1083 NPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 198/391 (50%), Gaps = 38/391 (9%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA- 70
            CKP+ +TYNT+I GL KE  V+ A   F Q+K ++++PD VT  +L+ GL       +A 
Sbjct: 643  CKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAI 701

Query: 71   --------------KRLFFEMMDQG--VQPSVVTFNVIMDELCKNGKMDEASRLLDLMV- 113
                           R F+E +  G  V+  +    +  +EL  NG   E S L+ L+  
Sbjct: 702  SIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRV 761

Query: 114  ----QRDVRP----NAFT-----YSTLMDGFCLTGKI------NRAEELFGSMESMGCKH 154
                +R++      + FT       TL    CL G++       +A +LF  M+++GC  
Sbjct: 762  LCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAP 821

Query: 155  DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
            D  ++N+L+  + K+ ++ E   LY+EM+S+  KP  +TYN +   L + + ++ AL  F
Sbjct: 822  DAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF 881

Query: 215  EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
             ++   D      TY   IDGL K G + EA+ LF  +    C+ +   +N LI+G  K 
Sbjct: 882  YDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKI 941

Query: 275  GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            G  E A +LF+ +    +  D+ +Y I++  LC  G++D+A   F +++   + P+ I +
Sbjct: 942  GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001

Query: 335  VTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
              +I+G  +  +  + + L ++M+ + ++PD
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEMRNRGIVPD 1032



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 156/311 (50%)

Query: 47   INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
            I+P + +YN LI  L   +   +A  LF +M + G  P   TFN+++    K+GK+ E  
Sbjct: 784  ISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELF 843

Query: 107  RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
             L   M+ R  +P+A TY+ ++     +  +++A + F  + S   +    +Y  LI+G 
Sbjct: 844  ELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGL 903

Query: 167  CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
             K   +EEA+ L+ EM   G KP    +N L  G  +I   E A +LF+ M  + +  D 
Sbjct: 904  AKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDL 963

Query: 227  STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
             +Y   +D LC  G + EA+  F  L     + D  AYN +I+GL KS R+E AL L+  
Sbjct: 964  KSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNE 1023

Query: 287  LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
            +  R +V D+ TYN ++  L   G +++A  ++ +++   + P+V  +  LI G+     
Sbjct: 1024 MRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSEN 1083

Query: 347  PSKVIELLHKM 357
            P     +   M
Sbjct: 1084 PEHAYTVYKNM 1094



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 191/403 (47%), Gaps = 44/403 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ +  N++ID L K G VD+A  +F +MK   ++P VVTYN+L+ GL       +A 
Sbjct: 538 CEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAI 597

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M+ +   P+ ++FN ++D  CKN +++ A ++   M   D +P+  TY+T++ G 
Sbjct: 598 ELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGL 657

Query: 132 CLTGKINRAEELFGSM-ESMGCKH-----------------------DDVSYNI------ 161
               K+N A   F  + +SM   H                        D  Y +      
Sbjct: 658 IKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNR 717

Query: 162 -----LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI---HQVE-HALK 212
                L+ G     E+++A+    E+V  GI       ++  + L  +   H+ E +A +
Sbjct: 718 SFWEDLMGGTLVEAEMDKAIIFAEELVLNGI----CREDSFLIPLVRVLCKHKRELYAYQ 773

Query: 213 LFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           +F++  +   ++   ++YN  I  L +  Y  +A +LF+ +  + C  D   +N L+   
Sbjct: 774 IFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVH 833

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
            KSG++    EL++ +  R    D +TYNI+I  L     +DKA D F D+  +   P  
Sbjct: 834 GKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +  LI G  ++ +  + + L  +M +    P+ +I +++++
Sbjct: 894 RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILIN 936



 Score =  148 bits (373), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 170/359 (47%), Gaps = 6/359 (1%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY TI   L   G + +   +  +M+      +  +YN LIH L  +    EA  ++  M
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRM 218

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           + +G++PS+ T++ +M  L K    +    LL  M    +RPN +T++  +      GKI
Sbjct: 219 VSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKI 278

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A E+F  M+  GC  D V+Y +LI+  C   ++E A  L+ +M + G KP  V Y TL
Sbjct: 279 DEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITL 338

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF---RTLGI 254
                +   ++   + + +M+ D    D  T+   +D LCK     EA   F   R  GI
Sbjct: 339 LDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGI 398

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L    ++  YN LI GL ++GR+E AL+L  ++    +     TY   I      G+  K
Sbjct: 399 LP---NLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGK 455

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A + F  M+   + PN++     ++    + +  +   + + ++E  + PD+   +M++
Sbjct: 456 AVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMM 514



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 145/278 (52%)

Query: 10   VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
            V C P+  T+N ++    K G + +   L+ +M      PD +TYN +I  L  +N+ ++
Sbjct: 817  VGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDK 876

Query: 70   AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
            A   F++++    +P+  T+  ++D L K G+++EA RL + M     +PN   ++ L++
Sbjct: 877  ALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILIN 936

Query: 130  GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            G+   G    A +LF  M + G + D  SY IL++  C    V+EAL  + E+ S G+ P
Sbjct: 937  GYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDP 996

Query: 190  TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
              + YN +  GL +  ++E AL L+ EM+   +  D  TYN+ +  L   G + +A  ++
Sbjct: 997  DFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMY 1056

Query: 250  RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
              L +   E D+  YN LI G   S   E A  +++++
Sbjct: 1057 EELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNM 1094



 Score =  140 bits (353), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 151/283 (53%), Gaps = 1/283 (0%)

Query: 57   LIHGLCHANDWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
            L+  LC       A ++F +   + G+ P++ ++N ++ EL +    ++A  L   M   
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 116  DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
               P+AFT++ L+     +GKI    EL+  M S  CK D ++YNI+I+   K+  +++A
Sbjct: 818  GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKA 877

Query: 176  LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
            L  + ++VS   +PT  TY  L  GL ++ ++E A++LFEEM       + + +N  I+G
Sbjct: 878  LDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILING 937

Query: 236  LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
              K G    A +LF+ +       D+++Y  L+D LC +GR++ AL  F  L    L  D
Sbjct: 938  YGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPD 997

Query: 296  VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
             + YN +I+GL    +M++A  L+ +M    + P++  + +L+
Sbjct: 998  FIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM 1040



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 149/322 (46%), Gaps = 35/322 (10%)

Query: 88  TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
           T N +++ L  + K+++ + + + M ++ +R +  TY T+     + G + +   +   M
Sbjct: 124 TCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKM 183

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
              G   +  SYN LI+   ++    EAL +YR MVS+G+KP++ TY+ L + L +    
Sbjct: 184 RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDS 243

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
           E  + L +EM+   +  +  T+   I  L + G I EA E+FR +    C  D+  Y  L
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVL 303

Query: 268 IDGLCKSGRLEIALELFRSL------PRRVL----------------------------- 292
           ID LC +G+LE A ELF  +      P +V+                             
Sbjct: 304 IDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY 363

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
           + DVVT+ I++  LC     D+A   F  M +  + PN+  + TLI G +R  +    ++
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423

Query: 353 LLHKMKEKKVMPDASIVSMVVD 374
           LL  M+   V P A      +D
Sbjct: 424 LLDTMESVGVQPTAYTYITFID 445



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 103/186 (55%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            CKPN   +N +I+G  K G  + A  LF +M  E I PD+ +Y  L+  LC A   +EA 
Sbjct: 924  CKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEAL 983

Query: 72   RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
              F E+   G+ P  + +N I++ L K+ +M+EA  L + M  R + P+ +TY++LM   
Sbjct: 984  YYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNL 1043

Query: 132  CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
             L G + +A+ ++  ++  G + D  +YN LI GY  ++  E A ++Y+ M+  G  P +
Sbjct: 1044 GLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNI 1103

Query: 192  VTYNTL 197
             TY  L
Sbjct: 1104 GTYAQL 1109



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 92/178 (51%), Gaps = 14/178 (7%)

Query: 1    MANGNGEIG---VVC-----------KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN 46
            + NG G+IG     C           +P+  +Y  ++D LC  G VD+A   F ++K   
Sbjct: 934  LINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTG 993

Query: 47   INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
            ++PD + YN +I+GL  +    EA  L+ EM ++G+ P + T+N +M  L   G +++A 
Sbjct: 994  LDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAK 1053

Query: 107  RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
            R+ + +    + P+ FTY+ L+ G+ L+     A  ++ +M   GC  +  +Y  L N
Sbjct: 1054 RMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 35/241 (14%)

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
           +VE+  +++  M  K I+  + TY T+F  L     +     +  +M++     +  +YN
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK----------------- 273
             I  L ++G+  EA+E++R +     +  ++ Y+ L+  L K                 
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 274 ------------------SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
                             +G+++ A E+FR +       D+VTY ++I  LCN GQ++ A
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
            +LF+ M+ N   P+ +I++TL+  F          E   +M+    MPD    +++VD+
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDV 376

Query: 376 L 376
           L
Sbjct: 377 L 377



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 4/192 (2%)

Query: 189 PTVV-TYNT--LFLGLFEIH-QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           PTV+ T  T    L    +H +VE    +FE MQ+  +  D  TY T    L   G + +
Sbjct: 116 PTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQ 175

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
              +   +      L+  +YN LI  L +SG    ALE++R +    L   + TY+ ++ 
Sbjct: 176 MTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMV 235

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            L      +    L  +ME+  + PNV  F   I    R  K  +  E+  +M ++   P
Sbjct: 236 ALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGP 295

Query: 365 DASIVSMVVDLL 376
           D    ++++D L
Sbjct: 296 DLVTYTVLIDAL 307


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 195/366 (53%), Gaps = 2/366 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEA 70
           C P+ V YNT+I G CK G  D+A  +F ++K E +  P+ V++++L+  LC  +   +A
Sbjct: 121 CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA 180

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             +F EM+  G++  V   N ++   C+ G + +A RLL  M       +AFTY  L++ 
Sbjct: 181 LAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNA 240

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  G+++            GC    V+YN +I G+ +   + EA  L+   ++K   P 
Sbjct: 241 HCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPD 300

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V TYN L + L +  Q+E AL LF+E ++  V  D  TY+  +D   K G   +A+E+F 
Sbjct: 301 VFTYN-LLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFY 359

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C  D   YN LI  L K G+++ ALEL   + R+ ++ D  TYNI+I  L + G
Sbjct: 360 NMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCG 419

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           + +KA+  F  M+    +P+V+ + TL++G  ++ +  +  +L  +M+  K MPD +   
Sbjct: 420 RYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFG 479

Query: 371 MVVDLL 376
            ++D L
Sbjct: 480 TLIDTL 485



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 184/366 (50%), Gaps = 1/366 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
            C  +  TY  +++  C+ G + +  +     + +      V YN +I G        EA
Sbjct: 226 ACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEA 285

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            +LF   M +   P V T+N+++  LCK+ +++EA  L     Q  V  + FTYS LMD 
Sbjct: 286 TQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDA 344

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           F   G+  +A E+F +M+  GC  D V YN+LI+   K  +V+EAL L  +M  KGI P 
Sbjct: 345 FGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPD 404

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             TYN +   L    + E A   F  M+R   + D  TYNT ++GL K     EA +LF 
Sbjct: 405 CRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFD 464

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +   KC  D+  +  LID L K+GR+E ALE    L +     +   YN +I G C  G
Sbjct: 465 EMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSG 524

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           Q+DK ++LF DM E +  P+ I +  L+ GF R    S  +ELL +M  +   P  +  +
Sbjct: 525 QVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYN 584

Query: 371 MVVDLL 376
           +++  L
Sbjct: 585 VLIRSL 590



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 171/338 (50%), Gaps = 5/338 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN +I  LCK   +++A  LF + +   +  DV TY+ L+     A    +A  +
Sbjct: 299 PDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEV 357

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F+ M   G  P  V +NV++  L K GK+DEA  LL+ M ++ + P+  TY+ ++D    
Sbjct: 358 FYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSS 417

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+  +A   FG M+      D V+YN L+NG  K +  +EA  L+ EM +    P + T
Sbjct: 418 CGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTT 477

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           + TL   L +  ++E AL+    + +   A ++  YN  I G C++G + +  ELF+ + 
Sbjct: 478 FGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMI 537

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D   Y  L+ G  + G   +A+EL + + R      + TYN++I  L   GQ++
Sbjct: 538 ECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVE 597

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
            A+ LF +M      P++  +  L +    ++ P+K +
Sbjct: 598 DAYTLFKEMIAKGFNPDMQTYSALPN----LSTPNKSV 631



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 174/380 (45%), Gaps = 39/380 (10%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
           A A +  +    +  D  T  +++  +C          L  E+  +GV  S VT    + 
Sbjct: 2   ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61

Query: 95  ELCKNGKMDEASRLLDLMVQRD-VRPNAFTYSTLMDGFCLTGKINRAEELFGSM-ESMGC 152
              + G +D A  +LD M + +  +P+   ++  M   C   ++ +A  LF  M E+  C
Sbjct: 62  AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-IKPTVVTYNTLFLGLFEIHQVEHAL 211
             D V+YN LI GYCK  + + AL ++R +  +G  KP  V+++TL + L ++ +   AL
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 181

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR------------TLGIL---- 255
            +F+EM    + AD +  NT I   C+ G + +A  L              T GIL    
Sbjct: 182 AVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAH 241

Query: 256 -------------------KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
                               C L    YN +I G  + GRL  A +LF S   +  V DV
Sbjct: 242 CRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDV 301

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
            TYN++I  LC   Q+++A  LF + E+  V  +V  +  L+  F +  + +K +E+ + 
Sbjct: 302 FTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYN 360

Query: 357 MKEKKVMPDASIVSMVVDLL 376
           M++   MPD  + ++++  L
Sbjct: 361 MQKAGCMPDTVVYNVLISCL 380



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 126/256 (49%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+TV YN +I  L K+G VD+A  L   M  + I PD  TYN +I  L     + +A 
Sbjct: 366 CMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAY 425

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             F  M  +   P VVT+N +++ L K  + DEA  L D M      P+  T+ TL+D  
Sbjct: 426 SFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTL 485

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G++  A E    +  MG   +   YN LI+G+C++ +V++   L+++M+     P  
Sbjct: 486 AKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDS 545

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY  L LG         A++L +EM R+      +TYN  I  L   G + +A  LF+ 
Sbjct: 546 ITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKE 605

Query: 252 LGILKCELDIQAYNCL 267
           +       D+Q Y+ L
Sbjct: 606 MIAKGFNPDMQTYSAL 621



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 75/161 (46%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  T+ T+ID L K G ++ A     ++      P+   YN+LI G C +   ++  
Sbjct: 471 CMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGY 530

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF +M++    P  +T+ +++    + G    A  LL  MV+    P   TY+ L+   
Sbjct: 531 ELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSL 590

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
            + G++  A  LF  M + G   D  +Y+ L N    NK V
Sbjct: 591 SMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPNLSTPNKSV 631


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/361 (34%), Positives = 188/361 (52%), Gaps = 2/361 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VTYNT++D  CKEG VD+A  L  +M+     P+ VTYN L++GL    +  +AK 
Sbjct: 212 KPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKG 271

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM++ G+  S  T+N +++  C+ G   EA  L++ MV R   P   TY+TLM G C
Sbjct: 272 LIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLC 331

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++      F  M       D VS+N L+ GYC+   + EA  L+ E+  + + PTV+
Sbjct: 332 KWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVI 391

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GL     ++ AL+L +EM    +  D  TY   ++G  K GY+  A   F  +
Sbjct: 392 TYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEM 451

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D  AYN  I G  K     +A  +   +       DV+TYN+ +H LC  G  
Sbjct: 452 LSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNF 511

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A DL  +M  + + P+ + + ++I+GFV+     K  E+ ++M  K V P  S+V+  
Sbjct: 512 EEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAP--SVVTYT 569

Query: 373 V 373
           V
Sbjct: 570 V 570



 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 181/353 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TYNT++ GLCK   V   +  F  M      PD+V++NSL++G C     +EA  L
Sbjct: 318 PTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLL 377

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E+  + + P+V+T+N ++  LC  G +D A RL   M  + + P+ FTY+ L++G   
Sbjct: 378 FDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFK 437

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A   F  M S G K D  +YN  I G  K  +   A S+  EM++ G  P V+T
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVIT 497

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN     L +    E A  L E M  D +  D  TY + I+G  KNG++ +A E+F  + 
Sbjct: 498 YNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEML 557

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  +  Y  LI        L++A   F  +  + + A+V+TYN +I+GLC   +MD
Sbjct: 558 SKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMD 617

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +A+  F +MEE  + PN   +  LI+    +    + + L  +M ++K+ PD+
Sbjct: 618 EAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDS 670



 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 176/357 (49%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TYN +I+G C++G   +A  L  +M      P + TYN+L++GLC        +  F +M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +     P +V+FN ++   C+ G + EA  L D +  RD+ P   TY+TL+ G C+ G +
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  L   M   G   D  +Y IL+NG  K   V  A   + EM+SKG+KP    YNT 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
            +G  +I     A  + EEM       D  TYN F+  LC+ G   EA +L   +     
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D   Y  +I+G  K+G L  A E+F  +  + +   VVTY ++IH       +D A  
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFM 586

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            F  M E +V  NVI +  +I+G     +  +  +   +M+EK ++P+    +++++
Sbjct: 587 YFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILIN 643



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 169/339 (49%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           +F +M    + PDV   N ++  L   N  ++AK ++  M   G++P+VVT+N ++D  C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K G++D+A  LL  M +R   PN  TY+ L++G    G++ +A+ L   M + G      
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +YN LING+C+     EA  L  EMV++   PT+ TYNTL  GL +  QV      F +M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
            +     D  ++N+ + G C+ G I EA  LF  L        +  YN LI GLC  G L
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + AL L + +  + L  D+ TY I+++G    G +  A   F +M    + P+   + T 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           I G ++I   S    +  +M      PD    ++ V  L
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 135/258 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY  +++G  K G+V  A+  F +M  + + PD   YN+ I G     D + A  +
Sbjct: 423 PDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSM 482

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+  G  P V+T+NV +  LC+ G  +EA  LL+ MV   + P+  TY+++++GF  
Sbjct: 483 QEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVK 542

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G + +A E+F  M S G     V+Y +LI+ +   + ++ A   + +M+ K +   V+T
Sbjct: 543 NGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVIT 602

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GL    +++ A K F+EM+   +  +  +Y   I+  C  GY  EA+ L+R + 
Sbjct: 603 YNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREML 662

Query: 254 ILKCELDIQAYNCLIDGL 271
             K + D   ++  +  L
Sbjct: 663 DRKIQPDSFTHSVFLKNL 680



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 117/240 (48%), Gaps = 1/240 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+   YNT I G  K      A ++  +M      PDV+TYN  +H LC   ++ EA  
Sbjct: 457 KPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACD 516

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+  G+ P  VT+  I++   KNG + +A  + + M+ + V P+  TY+ L+    
Sbjct: 517 LLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHA 576

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               ++ A   F  M       + ++YN +ING C  + ++EA   + EM  KGI P   
Sbjct: 577 AKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKF 636

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y  L      +   E AL+L+ EM    +  D+ T++ F+  L ++ Y V AV+   +L
Sbjct: 637 SYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRD-YQVHAVQCVESL 695



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 9/255 (3%)

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
           +M Q D + + F +  ++D   L G  +     +  ME +         ++LI G+    
Sbjct: 109 VMAQPDFKESEFVFCAILD--ILVGN-DLMHAAYWVMERVVSFEMHGVVDVLIAGHVX-- 163

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
                L ++ +M+  G+ P V   N +   L + + +  A  ++  M++  +     TYN
Sbjct: 164 ----CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYN 219

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           T +D  CK G + +A+EL   +    C  +   YN L++GL K G LE A  L   +   
Sbjct: 220 TMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNS 279

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
            L     TYN +I+G C  G   +A DL  +M      P +  + TL++G  +  + + V
Sbjct: 280 GLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGV 339

Query: 351 IELLHKMKEKKVMPD 365
                 M + K  PD
Sbjct: 340 RLRFSDMLKSKFTPD 354



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 78/157 (49%)

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           L +F++M R+ +  D    N  +  L     + +A  ++  +     +  +  YN ++D 
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
            CK GR++ ALEL   +  R    + VTYN++++GL   G++++A  L  +M  + +  +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
              +  LI+GF +     +  +L+ +M  ++  P  S
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLS 321



 Score = 41.2 bits (95), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 22/94 (23%), Positives = 52/94 (55%)

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           L +F  + R  L+ DV   N ++  L ++  + KA +++  ME+  + P V+ + T++  
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + +  +  + +ELL +M+E+   P+    +++V+
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVN 258


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 190/360 (52%), Gaps = 3/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + YN ++ G C  G +D A+ L   M    + PD  TYN+LI GLC     + A  +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAV 188

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M  +G  P VVT+ ++++  CK     +A +LLD M  +   P+  TY+ +++G C 
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A E   ++ S GC+ + VSYNI++ G    +  E+A  L  EM  KG  P VVT
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT 308

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L   L     VE A+++ E+M +     ++ +YN  +   CK   I +A+E    + 
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMV 368

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  DI +YN L+  LC++G +++A+EL   L  +     +++YN +I GL   G+  
Sbjct: 369 SRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTK 428

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A +L  +M    + P++I + T+  G  R ++  + +    K+++  + P A++ + ++
Sbjct: 429 EALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAIL 488



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 189/364 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TYNT+I GLC  G    A A+   M      PDVVTY  L+   C  + + +A +
Sbjct: 163 EPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMK 222

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM D+G  P +VT+NV+++ +C+ G++++A   L  +      PN  +Y+ ++ G  
Sbjct: 223 LLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLF 282

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +   AE+L   M   GC  + V++N+LI+  C+   VE A+ +  +M   G  P  +
Sbjct: 283 TAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSL 342

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YN L     +  ++  A++  E M       D  +YNT +  LC+NG +  A+EL   L
Sbjct: 343 SYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQL 402

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C   + +YN +IDGL K+G+ + ALEL   +  + L  D++TY+ +  GLC + ++
Sbjct: 403 KDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRI 462

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A   F  +++  + P   ++  ++ G  +  +    I+L   M     MP+ S  +++
Sbjct: 463 EEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTIL 522

Query: 373 VDLL 376
           V+ L
Sbjct: 523 VEGL 526



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 180/388 (46%), Gaps = 45/388 (11%)

Query: 26  LCKEGFVDKAKALFLQMKGENI-NPDVV-TYNSLIHGLCHANDWNEAKRLFFEMMDQGVQ 83
           L + G +D A  L   + G N  +P  V    +LI  LC +    +A+R+          
Sbjct: 77  LVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRVL-----AASG 131

Query: 84  PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN----- 138
           P V+ +N ++   C  G++D A RL+  M    V P+A+TY+TL+ G C  G+ +     
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRTSNALAV 188

Query: 139 ------------------------------RAEELFGSMESMGCKHDDVSYNILINGYCK 168
                                         +A +L   M   GC  D V+YN+++NG C+
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
              VE+A+   + + S G +P  V+YN +  GLF   + E A KL EEM       +  T
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT 308

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           +N  I  LC+ G +  A+E+   +    C  +  +YN L+   CK  ++  A+E    + 
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMV 368

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
            R    D+V+YN ++  LC +G++D A +L   +++   +P +I + T+I G  +  K  
Sbjct: 369 SRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTK 428

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + +ELL +M  K + PD    S +   L
Sbjct: 429 EALELLDEMTSKGLQPDIITYSTIASGL 456


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/332 (34%), Positives = 175/332 (52%), Gaps = 3/332 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDK---AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           P+  TYN++IDG CK+G          L  +M    I+P  VT+  LI+G C  ++   A
Sbjct: 224 PSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAA 283

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            R+F EM  QG+  SVVT+N ++  LC  GK++E  +L++ M    + PN  T+  ++ G
Sbjct: 284 VRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKG 343

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC  G +  A +    M     + D V Y ILI+GY +  ++E+A+++   M  KGI P 
Sbjct: 344 FCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPN 403

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V TYN L  G         A  L +EM+   + AD  TYN  I  LC  G + +AV+L  
Sbjct: 404 VTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLD 463

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +  +  E +   YN +I G C  G ++ A E+   + +    A+VVTYN+ I   C  G
Sbjct: 464 EMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIG 523

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           +MD+A+DL  +M +  + PN I + T+  G +
Sbjct: 524 KMDEANDLLNEMLDKCLVPNGITYETIKEGMM 555



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 184/356 (51%), Gaps = 3/356 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH---ANDWNEA 70
           P+  T+NT+I GLC+ G + KA  +   +K   + P V TYNSLI G C    A +    
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             L  EM++ G+ P+ VTF V+++  CKN     A R+ + M Q+ +  +  TY++L+ G
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  GK+    +L   ME +G   +++++  ++ G+CK   + +A      M  + ++P 
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VV Y  L  G   + ++E A+ + E M +  ++ + +TYN  I G  ++G    A  L  
Sbjct: 369 VVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +     E D+  YN LI  LC  G +  A++L   +    L  + +TYN +I G C+ G
Sbjct: 429 EMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            +  A+++   ME+     NV+ +   I  F +I K  +  +LL++M +K ++P+ 
Sbjct: 489 NIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNG 544



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 169/350 (48%), Gaps = 3/350 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+T + N ++ GL     VD A+  F       ++PD+ T+N++I GLC      +A  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNG---KMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           +  ++   G+ PSV T+N ++D  CK G    M     LL  MV+  + P A T+  L++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+C       A  +F  M+  G     V+YN LI+G C   +VEE + L  EM   G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             +T+  +  G  +   +  A    + M   +V  D   Y   IDG  + G + +A+ + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVK 392

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +       ++  YNCLI G  +SG    A  L   +  + + ADVVTYN++I  LC  
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           G++ KA  L  +M E  + PN + + T+I GF          E+  +M++
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 152/297 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VT+  +I+G CK      A  +F +MK + I   VVTYNSLI GLC      E  +L
Sbjct: 262 PTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKL 321

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM D G+ P+ +TF  ++   CK G M +A+  +D M +R+V P+   Y+ L+DG+  
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRR 381

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A  +  +M   G   +  +YN LI G+ ++ +   A  L  EM  KGI+  VVT
Sbjct: 382 LGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVT 441

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L   L    +V  A+KL +EM    +  +  TYNT I G C  G I  A E+   + 
Sbjct: 442 YNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRME 501

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             +   ++  YN  I   C+ G+++ A +L   +  + LV + +TY  +  G+   G
Sbjct: 502 KCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 164/320 (51%), Gaps = 3/320 (0%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P   + N+L+ GL  A   + A++ F   + + V P + TFN ++  LC+ G++ +A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCL---TGKINRAEELFGSMESMGCKHDDVSYNILING 165
              +    + P+  TY++L+DG+C     G +   + L   M   G     V++ +LING
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
           YCKN     A+ ++ EM  +GI  +VVTYN+L  GL    +VE  +KL EEM+   ++ +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
             T+   + G CK G + +A +    +     E D+  Y  LIDG  + G++E A+ +  
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
           ++ ++ +  +V TYN +I G    G    A  L  +M+E  +  +V+ +  LI       
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 346 KPSKVIELLHKMKEKKVMPD 365
           +  K ++LL +M E  + P+
Sbjct: 454 EVRKAVKLLDEMSEVGLEPN 473



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 149/297 (50%), Gaps = 3/297 (1%)

Query: 83  QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEE 142
           +PS  + N ++  L    ++D A +     ++R V P+ +T++T++ G C  G++ +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 143 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS---LYREMVSKGIKPTVVTYNTLFL 199
           +   +++ G      +YN LI+GYCK            L +EMV  GI PT VT+  L  
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           G  +      A+++FEEM++  +AA   TYN+ I GLC  G + E V+L   +  L    
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           +   + C++ G CK G +  A +    +  R +  DVV Y I+I G    G+M+ A  + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVK 392

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             M +  ++PNV  +  LI GF R         LL +MKEK +  D    ++++  L
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 112/191 (58%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V Y  +IDG  + G ++ A A+   M  + I+P+V TYN LI G   + DW  A  
Sbjct: 366 EPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASG 425

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM ++G++  VVT+NV++  LC  G++ +A +LLD M +  + PN  TY+T++ GFC
Sbjct: 426 LLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFC 485

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G I  A E+   ME    + + V+YN+ I  +C+  +++EA  L  EM+ K + P  +
Sbjct: 486 DKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGI 545

Query: 193 TYNTLFLGLFE 203
           TY T+  G+ E
Sbjct: 546 TYETIKEGMME 556



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 111/228 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +T+  ++ G CK+G +  A      M   N+ PDVV Y  LI G        +A  +
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAV 391

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +G+ P+V T+N ++    ++G    AS LLD M ++ +  +  TY+ L+   C 
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++ +A +L   M  +G + + ++YN +I G+C    ++ A  +   M     +  VVT
Sbjct: 452 KGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVT 511

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           YN       +I +++ A  L  EM    +  +  TY T  +G+ + GY
Sbjct: 512 YNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGY 559



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 2/94 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+G+  +PN +TYNTII G C +G +  A  +  +M+      +VVTYN  I   C    
Sbjct: 467 EVGL--EPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGK 524

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
            +EA  L  EM+D+ + P+ +T+  I + + + G
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 198/359 (55%), Gaps = 9/359 (2%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N I   LCK+G VD A +    M+ + I P+VV YN+++   C   + + A+ +F EM++
Sbjct: 453 NKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
           +G+QP+  T+++++D   KN     A  +++ M+  +   N   Y+T+++G C  G+ ++
Sbjct: 513 KGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSK 572

Query: 140 AEELFGSM-----ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           A+E+  ++      SMGC     SYN +I+G+ K  + + A+  YREM   GI P VVT+
Sbjct: 573 AKEMLQNLIKEKRYSMGC----TSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTF 628

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            +L  G  + ++++ AL++  EM+  D+  D   Y   IDG CK   +  A  LF  L  
Sbjct: 629 TSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLE 688

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L    ++  YN LI G    G+++ A++L++ +    +  D+ TY  MI GL  DG +  
Sbjct: 689 LGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLIL 748

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A DL+ ++    + P+ I++V L++G  +  +  +  ++L +MK+K   P+  I S V+
Sbjct: 749 ASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVI 807



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 180/342 (52%), Gaps = 3/342 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TY+ +IDG  K      A  +  QM   N   + V YN++I+GLC     ++AK 
Sbjct: 516 QPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKE 575

Query: 73  LFFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +   ++ ++       ++N I+D   K G  D A      M +  + PN  T+++L++GF
Sbjct: 576 MLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGF 635

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C + +++ A E+   M+S   K D  +Y  LI+G+CK  +++ A +L+ E++  G+ P V
Sbjct: 636 CKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNV 695

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             YN L  G   + +++ A+ L+++M  D ++ D  TY T IDGL K+G ++ A +L+  
Sbjct: 696 SVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSE 755

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L  L    D   Y  L++GL K G+   A ++   + ++    +V+ Y+ +I G   +G 
Sbjct: 756 LLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGN 815

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
           +++A  +  +M E  +  +  IF  L+ G  R+ KP    ++
Sbjct: 816 LNEAFRVHDEMLEKGLVHDDTIFNLLVSG--RVEKPPAAAKI 855



 Score =  167 bits (422), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 185/404 (45%), Gaps = 35/404 (8%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G     + +   ++I G C    + KA   F +M+ E + PD V ++ +I   C   + 
Sbjct: 337 VGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEM 396

Query: 68  NEAKRLFFEMMDQGVQPSVVTF----------------------------------NVIM 93
            +A  ++  M   G+ PS V                                    N I 
Sbjct: 397 EKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIF 456

Query: 94  DELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCK 153
             LCK GK+D A+  L +M  + + PN   Y+ +M   C    ++ A  +F  M   G +
Sbjct: 457 LLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQ 516

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            ++ +Y+ILI+G+ KN++ + A  +  +M++   +   V YNT+  GL ++ Q   A ++
Sbjct: 517 PNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEM 576

Query: 214 FEEMQRDD-VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
            + + ++   +   ++YN+ IDG  K G    AVE +R +       ++  +  LI+G C
Sbjct: 577 LQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFC 636

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           KS R+++ALE+   +  + L  DV  Y  +I G C    M  A+ LF ++ E  + PNV 
Sbjct: 637 KSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVS 696

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           ++  LI GF  + K    I+L  KM    +  D    + ++D L
Sbjct: 697 VYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGL 740



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 182/432 (42%), Gaps = 73/432 (16%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + VT   ++    +E   ++A  +F ++      PD + ++  +   C   D   A  L 
Sbjct: 238 DNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLL 297

Query: 75  FEMMDQGVQP-SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            EM ++G  P S  T+  ++    K G M+EA ++ D MV   +  +    ++L+ GFC 
Sbjct: 298 REMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCN 357

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++ +A + F  ME  G   D V ++++I  +CKN E+E+A+ +Y+ M S GI P+ V 
Sbjct: 358 GNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVL 417

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            + +  G  +    E AL++F +     +A        F+  LCK G +  A    R + 
Sbjct: 418 VHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFL-LLCKQGKVDAATSFLRMME 476

Query: 254 ILKCELDIQAYN-----------------------------------CLIDGLCKSGRLE 278
               E ++  YN                                    LIDG  K+   +
Sbjct: 477 NKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQ 536

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL-------------------- 318
            A E+   +      A+ V YN +I+GLC  GQ  KA ++                    
Sbjct: 537 NAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSI 596

Query: 319 ----------------FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
                           + +M EN ++PNV+ F +LI+GF + N+    +E++H+MK K +
Sbjct: 597 IDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDL 656

Query: 363 MPDASIVSMVVD 374
             D      ++D
Sbjct: 657 KLDVPAYGALID 668



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 142/289 (49%), Gaps = 8/289 (2%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           + +KR  FE+       S   FN +++   +N +MD A    +LMV R+V P     + +
Sbjct: 158 DSSKRFDFEL-------SSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNV 210

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +     +  I+ A+E++  M  +G   D+V+  +L+    + ++ EEA+ ++R ++S+G 
Sbjct: 211 LSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGA 270

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +P  + ++       ++  +  AL L  EM ++  V A   TY + I    K G + EAV
Sbjct: 271 EPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAV 330

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           ++   +      + + A   LI G C    L  AL+ F  +    L  D V +++MI   
Sbjct: 331 KVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWF 390

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           C + +M+KA +++  M+   +AP+ ++   +I G ++   P   +E+ +
Sbjct: 391 CKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFN 439



 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 162/378 (42%), Gaps = 35/378 (9%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           ++  +N +++   +   +D A   F  M   N+ P V   N+++  L  +N  +EAK ++
Sbjct: 168 SSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIY 227

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M+  GV    VT  ++M    +  K +EA ++   ++ R   P+   +S  +   C  
Sbjct: 228 NKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKM 287

Query: 135 GKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +  A +L   M E  G      +Y  +I    K   +EEA+ +  EMV  GI  +V+ 
Sbjct: 288 KDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIA 347

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
             +L  G    +++  AL  F  M+ + +A D   ++  I+  CKN  + +AVE+++ + 
Sbjct: 348 ATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMK 407

Query: 253 ----------------GILKCELDIQAYNCLIDG-----------------LCKSGRLEI 279
                           G LK E    A     D                  LCK G+++ 
Sbjct: 408 SVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDA 467

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A    R +  + +  +VV YN M+   C    MD A  +F +M E  + PN   +  LI 
Sbjct: 468 ATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILID 527

Query: 340 GFVRINKPSKVIELLHKM 357
           GF +        E++++M
Sbjct: 528 GFFKNQDEQNAWEVINQM 545



 Score = 42.4 bits (98), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 58/116 (50%)

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           EL  +A+N L++   ++ R++ A++ F  +  R +V  V   N ++  L     +D+A +
Sbjct: 166 ELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKE 225

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           ++  M    VA + +    L+   +R  KP + +++  ++  +   PD  + S+ V
Sbjct: 226 IYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAV 281


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 203/365 (55%), Gaps = 1/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V++N+I+  L K+  VD+A  LF  MK ++  P++ TYN +I  LC A   NEA 
Sbjct: 347 CIPSVVSFNSILTCLGKKRKVDEALTLFDVMK-KDAKPNISTYNIIIDMLCMAGRVNEAY 405

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++  EM   G+ P++++ N+++D LCK  +++EA R+ +   +R   PN+ TY +L+DG 
Sbjct: 406 KIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGL 465

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GKI+ A  LF  M   G   + + Y  LI  +  +   E+   +Y+EM+ +G +P +
Sbjct: 466 GKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDL 525

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
              NT    +F+  +VE    +FE+M+      D  +Y+  I GL K G   E   +F+ 
Sbjct: 526 TLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQA 585

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +      LD +AYN ++DGLCKSG+++ A E+   +  + +   V TY  ++ GL    +
Sbjct: 586 MSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDR 645

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A+ LF + +   +  NVI++ +LI GF ++ +  +   +L +M +K + P+    + 
Sbjct: 646 LDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 705

Query: 372 VVDLL 376
           ++D L
Sbjct: 706 LMDAL 710



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 191/365 (52%), Gaps = 4/365 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVTYNSLIHGLCHANDWNE 69
           C PN+VTY ++IDGL K+G +D A  LF +M   G + NP  + Y SLI          +
Sbjct: 451 CNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANP--IIYTSLIRNFFMHGRKED 508

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
             +++ EM+ +G +P +   N  MD + K G++++   + + M      P+  +YS L+ 
Sbjct: 509 GHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIH 568

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G    G+      +F +M   G   D  +YN +++G CK+ +V++A  +  EM  K + P
Sbjct: 569 GLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHP 628

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           TV TY ++  GL +I +++ A  LFEE +   +  +   Y++ IDG  K G I EA  + 
Sbjct: 629 TVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLIL 688

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +       ++  +N L+D L K+  ++ AL  F+S+       +  TY+I+I+GLC  
Sbjct: 689 EEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRV 748

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            + +KA   + +M++  + PNV+ + T+I G  ++   +    L  + K    +PD++  
Sbjct: 749 QKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASF 808

Query: 370 SMVVD 374
           + +++
Sbjct: 809 NALIE 813



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 204/397 (51%), Gaps = 36/397 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V+Y +++  LCK G + +A+ LF QM+ E   P    YN++I G   A  +++A +
Sbjct: 278 RPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYK 337

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   + ++G  PSVV+FN I+  L K  K+DEA  L D+M ++D +PN  TY+ ++D  C
Sbjct: 338 LLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKDAKPNISTYNIIIDMLC 396

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + G++N A ++   ME  G   + +S NI+++  CK  ++EEA  ++     +G  P  V
Sbjct: 397 MAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSV 456

Query: 193 TYNTLFLGLFEIHQVEHALKLFE-----------------------------------EM 217
           TY +L  GL +  +++ A +LFE                                   EM
Sbjct: 457 TYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEM 516

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
            R     D +  NT++D + K G + +   +F  +       D+++Y+ LI GL K+G+ 
Sbjct: 517 IRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQA 576

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
                +F+++ ++    D   YN ++ GLC  G++DKA+++  +M+   V P V  + ++
Sbjct: 577 RETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSI 636

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + G  +I++  +   L  + K K +  +  + S ++D
Sbjct: 637 VDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLID 673



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 188/365 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            KPN  TYN IID LC  G V++A  +  +M+   + P++++ N ++  LC AN   EA 
Sbjct: 381 AKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAH 440

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R+F    ++G  P+ VT+  ++D L K GK+D+A RL + M+      N   Y++L+  F
Sbjct: 441 RIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNF 500

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            + G+     +++  M   G + D    N  ++   K  EVE+  +++ +M S G  P V
Sbjct: 501 FMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDV 560

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +Y+ L  GL +  Q      +F+ M +   A D   YN  +DGLCK+G + +A E+   
Sbjct: 561 RSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEE 620

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +      +  Y  ++DGL K  RL+ A  LF     + +  +V+ Y+ +I G    G+
Sbjct: 621 MKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGR 680

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A+ +  +M +  + PNV  + +L+   V+  +  + +     MKE K  P+    S+
Sbjct: 681 IDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSI 740

Query: 372 VVDLL 376
           +++ L
Sbjct: 741 LINGL 745



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 157/263 (59%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
            YN ++DGLCK G VDKA  +  +MK ++++P V TY S++ GL   +  +EA  LF E 
Sbjct: 597 AYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEA 656

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
             +G++ +V+ ++ ++D   K G++DEA  +L+ M+++ + PN +T+++LMD    T +I
Sbjct: 657 KSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEI 716

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A   F SM+ M C  +  +Y+ILING C+ ++  +A   ++EM  +G+ P VVTY T+
Sbjct: 717 DEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTM 776

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL ++  +  A  LFE  + +    D++++N  I+G+      +EA ++F    +  C
Sbjct: 777 ISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGC 836

Query: 258 ELDIQAYNCLIDGLCKSGRLEIA 280
            L+++    L+D L K+  LE A
Sbjct: 837 RLNVKTCISLLDALNKTECLEQA 859



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 182/352 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN ++ N ++D LCK   +++A  +F        NP+ VTY SLI GL      ++A RL
Sbjct: 418 PNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRL 477

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+D G   + + +  ++     +G+ ++  ++   M++R  RP+    +T MD    
Sbjct: 478 FEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFK 537

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++ +   +F  M+S G   D  SY+ILI+G  K  +  E  ++++ M  +G       
Sbjct: 538 AGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARA 597

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GL +  +V+ A ++ EEM+   V    +TY + +DGL K   + EA  LF    
Sbjct: 598 YNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAK 657

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               EL++  Y+ LIDG  K GR++ A  +   + ++ L  +V T+N ++  L    ++D
Sbjct: 658 SKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEID 717

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A   F  M+E   +PN   +  LI+G  R+ K +K      +M+++ ++P+
Sbjct: 718 EALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPN 769



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 170/346 (49%), Gaps = 35/346 (10%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+    NT +D + K G V+K +A+F  MK     PDV +Y+ LIHGL  A    E   
Sbjct: 522 RPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSN 581

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  M  QG       +N ++D LCK+GK+D+A  +L+ M  + V P   TY +++DG  
Sbjct: 582 IFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLA 641

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +++ A  LF   +S G + + + Y+ LI+G+ K   ++EA  +  EM+ KG+ P V 
Sbjct: 642 KIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY 701

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N+L   L +  +++ AL  F+ M+    + +T TY+  I+GLC+              
Sbjct: 702 TWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCR-------------- 747

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   +Q YN              A   ++ + ++ L+ +VVTY  MI GL   G +
Sbjct: 748 --------VQKYN-------------KAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNI 786

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
             A+ LF   + N   P+   F  LI G    N+P +  ++  + +
Sbjct: 787 TDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETR 832



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 181/365 (49%), Gaps = 7/365 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P    Y  +I  L +    ++A  L  QM+       V  + +L+  L        A  
Sbjct: 173 RPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALA 232

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  E+    ++P +V +NV +D   K G +D A +    +    +RP+  +Y++++   C
Sbjct: 233 LVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLC 292

Query: 133 LTGKINRAEELFGSMES---MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             G++  AEELFG ME+   + C +   +YN +I GY   +  ++A  L   +  +G  P
Sbjct: 293 KAGRLGEAEELFGQMEAERDVPCAY---AYNTMIMGYGSAERFDDAYKLLERLRERGCIP 349

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           +VV++N++   L +  +V+ AL LF+ M++ D   + STYN  ID LC  G + EA ++ 
Sbjct: 350 SVVSFNSILTCLGKKRKVDEALTLFDVMKK-DAKPNISTYNIIIDMLCMAGRVNEAYKIR 408

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             + +     ++ + N ++D LCK+ +LE A  +F S   R    + VTY  +I GL   
Sbjct: 409 DEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKK 468

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++D A+ LF  M +     N II+ +LI  F    +     ++  +M  +   PD +++
Sbjct: 469 GKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLL 528

Query: 370 SMVVD 374
           +  +D
Sbjct: 529 NTYMD 533



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 184/394 (46%), Gaps = 38/394 (9%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           + T++  L +EG ++ A AL  ++KG  + PD+V YN  I     A   + A + F E+ 
Sbjct: 214 FTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELK 273

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM-VQRDVRPNAFTYSTLMDGFCLTGKI 137
             G++P  V++  ++  LCK G++ EA  L   M  +RDV P A+ Y+T++ G+    + 
Sbjct: 274 AHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDV-PCAYAYNTMIMGYGSAERF 332

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A +L   +   GC    VS+N ++    K ++V+EAL+L+ +++ K  KP + TYN +
Sbjct: 333 DDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLF-DVMKKDAKPNISTYNII 391

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
              L    +V  A K+ +EM+   +  +  + N  +D LCK   + EA  +F +     C
Sbjct: 392 IDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGC 451

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY-----NIMIHGLCND--- 309
             +   Y  LIDGL K G+++ A  LF  +      A+ + Y     N  +HG   D   
Sbjct: 452 NPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHK 511

Query: 310 ---------------------------GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
                                      G+++K   +F DM+     P+V  +  LIHG  
Sbjct: 512 IYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLT 571

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +  +  +   +   M ++    DA   + VVD L
Sbjct: 572 KAGQARETSNIFQAMSQQGFALDARAYNAVVDGL 605



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 148/316 (46%), Gaps = 1/316 (0%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           M+     P    Y  LI  L  A     A  L  +M D G + SV  F  ++  L + G+
Sbjct: 167 MRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQ 226

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           M+ A  L+D +    + P+   Y+  +D F   G ++ A + F  +++ G + DDVSY  
Sbjct: 227 MEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTS 286

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           ++   CK   + EA  L+ +M ++   P    YNT+ +G     + + A KL E ++   
Sbjct: 287 MVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERG 346

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
                 ++N+ +  L K   + EA+ LF  +     + +I  YN +ID LC +GR+  A 
Sbjct: 347 CIPSVVSFNSILTCLGKKRKVDEALTLFDVMK-KDAKPNISTYNIIIDMLCMAGRVNEAY 405

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           ++   +    L  ++++ NIM+  LC   Q+++AH +F    E    PN + + +LI G 
Sbjct: 406 KIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGL 465

Query: 342 VRINKPSKVIELLHKM 357
            +  K      L  KM
Sbjct: 466 GKKGKIDDAYRLFEKM 481



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 116/226 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TY +I+DGL K   +D+A  LF + K + I  +V+ Y+SLI G       +EA  +
Sbjct: 628 PTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLI 687

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EMM +G+ P+V T+N +MD L K  ++DEA      M +    PN +TYS L++G C 
Sbjct: 688 LEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCR 747

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K N+A   +  M+  G   + V+Y  +I+G  K   + +A SL+    + G  P   +
Sbjct: 748 VQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSAS 807

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
           +N L  G+   ++   A ++FEE +      +  T  + +D L K 
Sbjct: 808 FNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKT 853



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 158/336 (47%), Gaps = 11/336 (3%)

Query: 44  GENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMD 103
            + + PD   YN+++  L H  D    +++  EM   G          ++  L ++ +++
Sbjct: 103 SQPLPPD--AYNAVLPFLSH--DLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLE 158

Query: 104 EASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILI 163
           +A R++  M     RP    Y+ L+       +  RA EL   M+ +G +     +  L+
Sbjct: 159 DAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLV 218

Query: 164 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVA 223
               +  ++E AL+L  E+    ++P +V YN       +   V+ A K F E++   + 
Sbjct: 219 RALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLR 278

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ---AYNCLIDGLCKSGRLEIA 280
            D  +Y + +  LCK G + EA ELF   G ++ E D+    AYN +I G   + R + A
Sbjct: 279 PDDVSYTSMVWVLCKAGRLGEAEELF---GQMEAERDVPCAYAYNTMIMGYGSAERFDDA 335

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            +L   L  R  +  VV++N ++  L    ++D+A  LF  M+++A  PN+  +  +I  
Sbjct: 336 YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA-KPNISTYNIIIDM 394

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                + ++  ++  +M+   + P+   V+++VD L
Sbjct: 395 LCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRL 430



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 62/120 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNT TY+ +I+GLC+    +KA   + +M+ + + P+VVTY ++I GL    +  +A 
Sbjct: 731 CSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAY 790

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF      G  P   +FN +++ +    +  EA ++ +    R  R N  T  +L+D  
Sbjct: 791 SLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDAL 850



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 54/93 (58%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY T+I GL K G +  A +LF + K     PD  ++N+LI G+ +AN   EA ++
Sbjct: 768 PNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQV 827

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           F E   +G + +V T   ++D L K   +++A+
Sbjct: 828 FEETRLRGCRLNVKTCISLLDALNKTECLEQAA 860


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/357 (34%), Positives = 192/357 (53%), Gaps = 1/357 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VT+N++++G+CK G ++ A+ +F +M  E + PD V+YN+L+ G C A   +EA  
Sbjct: 257 KPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALS 316

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM  +G+ P VVTF  ++  +CK G ++ A  L+  M +R ++ N  T++ L+DGFC
Sbjct: 317 VFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFC 376

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A      M+    K   V YN LINGYC    ++EA  L  EM +KG+KP VV
Sbjct: 377 KKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVV 436

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+T+     +      A +L ++M    V  D  TY++ I  LC    + +A  LF+ +
Sbjct: 437 TYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNM 496

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             L  + D   Y  LIDG CK G +E AL L   + +  ++ DVVTY+++I+GL    + 
Sbjct: 497 IKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARA 556

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            +A  L   +      P    +  L+H   R  +   V+ LL     K +M +A  V
Sbjct: 557 MEAQQLLFKLYHEDPIPANTKYDALMH-CCRKAELKSVLALLKGFCMKGLMNEADKV 612



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 192/359 (53%), Gaps = 6/359 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C PN VTYNT++    + G VD A+ L   M+   + P++VT+NS+++G+C A    
Sbjct: 218 GAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKME 277

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A+++F EM+ +G+ P  V++N ++   CK G   EA  +   M Q+ + P+  T+++L+
Sbjct: 278 DARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLI 337

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
              C  G + RA  L   M   G + ++V++  LI+G+CK   +++AL   R M    IK
Sbjct: 338 HVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIK 397

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P+VV YN L  G   + +++ A +L  EM+   +  D  TY+T I   CKN     A EL
Sbjct: 398 PSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFEL 457

Query: 249 FRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            + +   G+L    D   Y+ LI  LC   RL  A  LF+++ +  L  D  TY  +I G
Sbjct: 458 NQQMLEKGVLP---DAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDG 514

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            C +G ++ A  L   M +  V P+V+ +  LI+G  +  +  +  +LL K+  +  +P
Sbjct: 515 HCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIP 573



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 186/361 (51%), Gaps = 1/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + YN ++  L  +  +  A+  F  M  + + P+V TYN L+  LC      EA  +
Sbjct: 154 PSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   G  P+VVT+N ++    + G++D A RL+ +M +  ++PN  T++++++G C 
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A ++F  M   G   D VSYN L+ GYCK     EALS++ EM  KGI P VVT
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 332

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           + +L   + +   +E A+ L  +M+   +  +  T+   IDG CK G++ +A+   R + 
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMK 392

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             + +  +  YN LI+G C  GR++ A EL   +  + L  DVVTY+ +I   C +    
Sbjct: 393 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 452

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A +L   M E  V P+ I + +LI       + S    L   M +  + PD    + ++
Sbjct: 453 SAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 512

Query: 374 D 374
           D
Sbjct: 513 D 513



 Score =  200 bits (509), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 112/328 (34%), Positives = 178/328 (54%), Gaps = 1/328 (0%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P V+ YN+++  L  A+    A+R F  M+  GV P+V T+N+++  LC  G   EA  +
Sbjct: 154 PSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
           L  M      PN  TY+TL+  F   G+++ AE L G M   G K + V++N ++NG CK
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             ++E+A  ++ EMV +G+ P  V+YNTL  G  +      AL +F EM +  +  D  T
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 332

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           + + I  +CK G +  AV L R +     +++   +  LIDG CK G L+ AL   R + 
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMK 392

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
           +  +   VV YN +I+G C  G+MD+A +L  +ME   + P+V+ + T+I  + +     
Sbjct: 393 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 452

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVDLL 376
              EL  +M EK V+PDA   S ++ +L
Sbjct: 453 SAFELNQQMLEKGVLPDAITYSSLIRVL 480



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 193/363 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN ++  LC  G   +A ++   M+G    P+VVTYN+L+     A + + A+RL
Sbjct: 188 PNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERL 247

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M + G++P++VTFN +++ +CK GKM++A ++ D MV+  + P+  +Y+TL+ G+C 
Sbjct: 248 VGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCK 307

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A  +F  M   G   D V++  LI+  CK   +E A++L R+M  +G++   VT
Sbjct: 308 AGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVT 367

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  G  +   ++ AL     M++  +      YN  I+G C  G + EA EL   + 
Sbjct: 368 FTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEME 427

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+  Y+ +I   CK+     A EL + +  + ++ D +TY+ +I  LC + ++ 
Sbjct: 428 AKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLS 487

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            AH LF +M +  + P+   + +LI G  +       + L  KM +  V+PD    S+++
Sbjct: 488 DAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLI 547

Query: 374 DLL 376
           + L
Sbjct: 548 NGL 550



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 204/412 (49%), Gaps = 50/412 (12%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+YNT++ G CK G   +A ++F +M  + I PDVVT+ SLIH +C A +   A  L
Sbjct: 293 PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTL 352

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M ++G+Q + VTF  ++D  CK G +D+A   +  M Q  ++P+   Y+ L++G+C+
Sbjct: 353 VRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCM 412

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A EL   ME+ G K D V+Y+ +I+ YCKN +   A  L ++M+ KG+ P  +T
Sbjct: 413 VGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAIT 472

Query: 194 YNTL-------------------------------FLGLFEIH----QVEHALKLFEEMQ 218
           Y++L                               +  L + H     VE AL L ++M 
Sbjct: 473 YSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMV 532

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL-------------GILKC--ELDIQA 263
           +  V  D  TY+  I+GL K+   +EA +L   L              ++ C  + ++++
Sbjct: 533 KAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKS 592

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
              L+ G C  G +  A ++++S+  R    D   Y+++IHG C  G + KA      M 
Sbjct: 593 VLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQML 652

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
           +   APN    ++LI G        +  +++ ++     + DA     ++DL
Sbjct: 653 QGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDL 704



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 173/366 (47%), Gaps = 50/366 (13%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N VT+  +IDG CK+GF+D A      MK   I P VV YN+LI+G C     +EA+ L 
Sbjct: 364 NEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELL 423

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM  +G++P VVT++ I+   CKN     A  L   M+++ V P+A TYS+L+   C  
Sbjct: 424 HEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGE 483

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            +++ A  LF +M  +G + D+ +Y  LI+G+CK   VE ALSL+ +MV  G+ P VVTY
Sbjct: 484 KRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTY 543

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF---------------IDGLCKN 239
           + L  GL +  +   A +L  ++  +D     + Y+                 + G C  
Sbjct: 544 SVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMK 603

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G + EA ++++++      LD   Y+ LI G C++G +  AL   + + +     +  + 
Sbjct: 604 GLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTST 663

Query: 300 NIMIHGL-----------------------------------CNDGQMDKAHDLFLDMEE 324
             +I GL                                    N+G +D   D+   M +
Sbjct: 664 ISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAK 723

Query: 325 NAVAPN 330
           + + P+
Sbjct: 724 DGLLPS 729



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 95/180 (52%), Gaps = 1/180 (0%)

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G  P+V+ YN + L L +   +  A + F+ M  D VA +  TYN  +  LC  G+  EA
Sbjct: 151 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           + + R +    C  ++  YN L+    ++G ++ A  L   +    L  ++VT+N M++G
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +C  G+M+ A  +F +M    +AP+ + + TL+ G+ +     + + +  +M +K +MPD
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 89/228 (39%), Gaps = 50/228 (21%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGL----------- 61
           +P+  TY ++IDG CKEG V+ A +L  +M    + PDVVTY+ LI+GL           
Sbjct: 502 QPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQ 561

Query: 62  ---------------------------------------CHANDWNEAKRLFFEMMDQGV 82
                                                  C     NEA +++  M+D+  
Sbjct: 562 LLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNW 621

Query: 83  QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEE 142
                 ++V++   C+ G + +A      M+Q    PN+ +  +L+ G    G +  A++
Sbjct: 622 NLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQ 681

Query: 143 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   + +     D  +   LI+       V+  L +   M   G+ P+
Sbjct: 682 VIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729


>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Vitis vinifera]
          Length = 867

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 111/303 (36%), Positives = 172/303 (56%), Gaps = 3/303 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVD--KAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           KPN VTYN +ID  C +G VD  +A  +F +M    + PD +T+NSL+        W  A
Sbjct: 252 KPNLVTYNAVIDA-CGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAA 310

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           + LF EM+ +G++  + T+N ++D +CK G+MD A +++  M ++ + PN  TYST++DG
Sbjct: 311 RNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDG 370

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G+++ A  LF  M+      D VSYN L++ Y K    EEAL++ +EM S GIK  
Sbjct: 371 YAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKD 430

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            VTYN L  G  +  + E   ++FEEM+ + +  +  TY+T ID   K G   EA+E+FR
Sbjct: 431 AVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFR 490

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
                  + D+  Y+ LID LCK+G +E A+     + +  +  +VVTYN +I      G
Sbjct: 491 EFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSG 550

Query: 311 QMD 313
             +
Sbjct: 551 SAE 553



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 181/341 (53%), Gaps = 4/341 (1%)

Query: 15  NTV-TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN-DWNEAKR 72
           NTV  ++ +I    + G+ D+A  +F  MK   + P++VTYN++I        D+N A  
Sbjct: 218 NTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAE 277

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR-LLDLMVQRDVRPNAFTYSTLMDGF 131
           +F EM+  GVQP  +TFN ++  +C  G + EA+R L   M+ R +  + FTY+TL+D  
Sbjct: 278 IFDEMLRNGVQPDRITFNSLL-AVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAV 336

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A ++   M       + V+Y+ +I+GY K   ++EAL+L+ EM    I    
Sbjct: 337 CKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDR 396

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+YNTL     ++ + E AL + +EM+   +  D  TYN  + G  K G   E   +F  
Sbjct: 397 VSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEE 456

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +   ++  Y+ LID   K G  + A+E+FR   +  L ADVV Y+ +I  LC +G 
Sbjct: 457 MKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGL 516

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
           ++ A     +M +  + PNV+ + ++I  F R      VI+
Sbjct: 517 VESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVID 557



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 161/309 (52%), Gaps = 3/309 (0%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           AK +F   +++G   +V  F+ ++    ++G  DEA ++ + M    ++PN  TY+ ++D
Sbjct: 204 AKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVID 263

Query: 130 GFCLTGKI--NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
             C  G +  NRA E+F  M   G + D +++N L+    +    E A +L+ EM+ +GI
Sbjct: 264 A-CGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGI 322

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +  + TYNTL   + +  Q++ A ++  EM R  +  +  TY+T IDG  K G + EA+ 
Sbjct: 323 EQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALN 382

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           LF  +      LD  +YN L+    K GR E AL + + +    +  D VTYN ++ G  
Sbjct: 383 LFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYG 442

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G+ ++   +F +M+   + PN++ + TLI  + +     + +E+  + K+  +  D  
Sbjct: 443 KQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVV 502

Query: 368 IVSMVVDLL 376
           + S ++D L
Sbjct: 503 LYSALIDAL 511



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 133/293 (45%), Gaps = 31/293 (10%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + VTYN ++ G  K+G  ++ K +F +MK E I P+++TY++LI        + EA  
Sbjct: 428 KKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAME 487

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F E    G++  VV ++ ++D LCKNG ++ A   LD M +  +RPN  TY++++D F 
Sbjct: 488 VFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFG 547

Query: 133 LTG----------KINRAEELFGSME--------SMGCKHDDVSYNIL----INGYCKNK 170
            +G          + N ++    S++         +G K D+    I         C  K
Sbjct: 548 RSGSAECVIDPPYETNVSKMSSSSLKVVEDATESEVGDKEDNQIIKIFGQLAAEKTCHAK 607

Query: 171 EVEEA-------LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVA 223
           +           L+++ +M    IKP VVT++ +       +  E A  L EE++  D  
Sbjct: 608 KENRGRQEILCILAVFHKMHELDIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQ 667

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
                +   + G   N + V+A  LF  +  +        YN L D L   G+
Sbjct: 668 VYGVAHGLLM-GYGDNVW-VQAQSLFDEVKQMDSSTASAFYNALTDMLWHFGQ 718


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 193/375 (51%), Gaps = 6/375 (1%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+  +C PN + Y T+I+G CK G VD+A  L  +MK   +  DV+ +++LI GLC    
Sbjct: 102 ELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGR 161

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR-----DVRPNA 121
            +EA    F+ M +   P+V+T+N +++ LCK  ++DEA  L D M +R        P+ 
Sbjct: 162 IDEALEQ-FKSMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDV 220

Query: 122 FTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 181
            +YST++D  C   ++++A E F  M ++GC  + V+Y+ LI+G CK     E L L   
Sbjct: 221 ISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLH 280

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M  KG    ++ +N +   L++  + E A + FE + +     +  TYN  + GLCK G 
Sbjct: 281 MKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGR 340

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           + EA  +   +   K   D+  Y+ +IDG CK+GR++ A ++F  +     +   VT+  
Sbjct: 341 VDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMT 400

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           ++HG     +  +A  +  DM      P +  +  L+      +     +E+ HKMK KK
Sbjct: 401 LLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKK 460

Query: 362 VMPDASIVSMVVDLL 376
             PD +  + ++  L
Sbjct: 461 RQPDCNTYAPLIQCL 475



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 198/423 (46%), Gaps = 73/423 (17%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC--------- 62
           C+P+ ++Y+T+ID LCK   VDKA   F +M+     P+VVTY+SLI GLC         
Sbjct: 216 CEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECL 275

Query: 63  ----------------------HA---NDWNEAKRLFFE-MMDQGVQPSVVTFNVIMDEL 96
                                 HA   ND  E    FFE ++  G +P+VVT+NV +  L
Sbjct: 276 ELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGL 335

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           CK G++DEA R+L  MV+  V P+  TYS+++DGFC  G++++A+++F  M    C    
Sbjct: 336 CKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHP 395

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           V++  L++G+ ++K+  EA  ++ +MV+ G  P + TYN L   +     VE AL+++ +
Sbjct: 396 VTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHK 455

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG- 275
           M+R     D +TY   I  LC+   + EA E    +       +    + L++ LCK G 
Sbjct: 456 MKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGE 515

Query: 276 ----------------------------------RLEIALELFRSLPRRVLVADVVTYNI 301
                                             + E A +L RS      VAD  TY++
Sbjct: 516 VDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPG---FVADAATYSL 572

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
            +  +C  G+ D+A ++   M    V P+   +V ++     +++    I    KM  + 
Sbjct: 573 CVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRG 632

Query: 362 VMP 364
             P
Sbjct: 633 CAP 635



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 178/333 (53%), Gaps = 8/333 (2%)

Query: 39  FLQMKG--ENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
           F Q  G       +  T   L++    A    EA RL  E ++    P+ + +  +++  
Sbjct: 62  FFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGF 121

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           CK G++D+A  LLD M +R V+ +   +STL+ G C  G+I+ A E F SM    C  + 
Sbjct: 122 CKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNV 180

Query: 157 VSYNILINGYCKNKEVEEALSLYREM-----VSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
           ++YN ++NG CK   ++EAL L+ +M      S G +P V++Y+T+   L +  +V+ A 
Sbjct: 181 ITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAY 240

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           + F+ M+    A +  TY++ IDGLCK     E +EL   +      ++I  +N ++  L
Sbjct: 241 EYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHAL 300

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
            K+   E A + F  L +     +VVTYN+ +HGLC  G++D+A+ + L+M E+ V P+V
Sbjct: 301 WKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDV 360

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           I + ++I GF +  +  K  ++  +M   + +P
Sbjct: 361 ITYSSIIDGFCKAGRMDKADDVFTRMMVHECIP 393



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 164/299 (54%), Gaps = 6/299 (2%)

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           G Q +  T  V+++   K  + +EA RLL   ++    PN   Y+T+++GFC  G++++A
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
            EL   M+  G K D + ++ LI G C+   ++EAL  ++ M  +   P V+TYNT+  G
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNTVVNG 189

Query: 201 LFEIHQVEHALKLFEEMQRDDVAA-----DTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           L + ++++ AL+LF++M++   A+     D  +Y+T ID LCK   + +A E F+ +  +
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 249

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
            C  ++  Y+ LIDGLCK  R    LEL   +  +    +++ +N M+H L  + + +KA
Sbjct: 250 GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKA 309

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
              F  + ++   PNV+ +   +HG  +  +  +   +L +M E KV PD    S ++D
Sbjct: 310 CQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIID 368



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 156/324 (48%), Gaps = 3/324 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TY++IIDG CK G +DKA  +F +M      P  VT+ +L+HG        EA R+
Sbjct: 358 PDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRV 417

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M++ G  P + T+NV+MD +C    ++ A  +   M ++  +P+  TY+ L+   C 
Sbjct: 418 HEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCR 477

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +++ A+E    ME+     +    + L+   CK  EV+EA S+   +V  G +P   T
Sbjct: 478 ARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGET 537

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L   L+   + E A KL   ++     AD +TY+  +  +CK G   EAVE+   + 
Sbjct: 538 FKILVEELYLRKKWEAASKL---LRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMV 594

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +     D   Y  ++  LC   R+E A+  F  +  R     +VTY ++I   C+    D
Sbjct: 595 LKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMAD 654

Query: 314 KAHDLFLDMEENAVAPNVIIFVTL 337
           +A  +F  M      P      TL
Sbjct: 655 EAFRIFEAMVAAGFTPQAQTMRTL 678



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 108/260 (41%), Gaps = 32/260 (12%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TYN ++D +C    V+ A  ++ +MK +   PD  TY  LI  LC A   +EAK  
Sbjct: 428 PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEF 487

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP-------------- 119
              M    V P+    + +++ LCK G++DEA  +LD +V+   +P              
Sbjct: 488 LDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYL 547

Query: 120 ------------------NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
                             +A TYS  +   C  GK + A E+   M   G + D+ +Y  
Sbjct: 548 RKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVA 607

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           ++   C    VE A++ + +M S+G  P +VTY  L          + A ++FE M    
Sbjct: 608 VLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAG 667

Query: 222 VAADTSTYNTFIDGLCKNGY 241
                 T  T    L   GY
Sbjct: 668 FTPQAQTMRTLSSCLRDAGY 687



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 41/91 (45%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TY  ++  LC    V+ A A F +M      P +VTY  LI   C A+  +EA R
Sbjct: 599 RPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFR 658

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMD 103
           +F  M+  G  P   T   +   L   G  D
Sbjct: 659 IFEAMVAAGFTPQAQTMRTLSSCLRDAGYQD 689


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 195/364 (53%), Gaps = 4/364 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN+VTY+T+I+GLC EG VD+A  +  +M  + I P V TY   I  LC      EA 
Sbjct: 306 CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAI 365

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M  +G +P+V T+  ++  L + GK++ A  L   M++  + PN  TY+ L++  
Sbjct: 366 ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINEL 425

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C+ G+ + A ++F  ME  G   +  +YN +I G C   ++E+A+ L+ +M+  G  PTV
Sbjct: 426 CVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTV 485

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  G      V +A +L + M+ +    D  TYN  + G  K G +  A   F+ 
Sbjct: 486 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 545

Query: 252 LGILKCELDIQ--AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           +  ++C L+    +Y  LIDG  K G+++IAL L   +       +V +YN +I+GL  +
Sbjct: 546 M--VECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKE 603

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            +  +A  +   M E  + PNVI + TLI G  R  +     ++ H M+++K +P+    
Sbjct: 604 NRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTY 663

Query: 370 SMVV 373
           S ++
Sbjct: 664 SSLI 667



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/330 (34%), Positives = 175/330 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNTVTYN +I+ LC  G    A  +F  M+G     +  TYN +I GLC   D  +A  L
Sbjct: 413 PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 472

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+  G  P+VVT+N +++     G ++ A+RLLDLM +    P+ +TY+ L+ GF  
Sbjct: 473 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 532

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A   F  M   G   + VSY  LI+G+ K+ +V+ ALSL   M   G  P V +
Sbjct: 533 WGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVES 592

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  GL + ++   A K+ ++M    +  +  TY T IDGLC+NG    A ++F  + 
Sbjct: 593 YNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 652

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             KC  ++  Y+ LI GLC+ G+ + A  L + + R+ L  D VT+  +I G    G++D
Sbjct: 653 KRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRID 712

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            A  L   M +    PN   +  L+ G  +
Sbjct: 713 HAFLLLRRMVDVGCKPNYRTYSVLLKGLQK 742



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 192/376 (51%), Gaps = 24/376 (6%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V+Y T+IDG  K+G VD A +L  +M+    NP+V +YN++I+GL   N ++EA+++
Sbjct: 553 PNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKI 612

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M +QG+ P+V+T+  ++D LC+NG+   A ++   M +R   PN +TYS+L+ G C 
Sbjct: 613 CDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ 672

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK + AE L   ME  G   D+V++  LI+G+     ++ A  L R MV  G KP   T
Sbjct: 673 EGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRT 732

Query: 194 YNTLFLGL--------------------FEIHQ----VEHALKLFEEMQRDDVAADTSTY 229
           Y+ L  GL                    F  H+     E    L   M          TY
Sbjct: 733 YSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTY 792

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           +T + GLC+ G   EA +L + +       D + Y  L+   CK+  ++ AL++F S+  
Sbjct: 793 STLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEA 852

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
           +     +  Y  +I  LC  GQ+++A  LF +M E     + I++  L+ G ++  +   
Sbjct: 853 KGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDL 912

Query: 350 VIELLHKMKEKKVMPD 365
            ++LLH M+ K   P+
Sbjct: 913 CMKLLHIMESKNFTPN 928



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 205/399 (51%), Gaps = 35/399 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ +T+NT+I+ L K+G V +A+ +  Q+   +++PDV TY SLI G C   + + A  
Sbjct: 237 QPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFG 296

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  M+ +G  P+ VT++ +++ LC  G++DEA  +L+ M+++ + P  +TY+  +   C
Sbjct: 297 VFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 356

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                  A EL   M+  GC+ +  +Y  LI+G  +  ++E A+ LY +M+ +G+ P  V
Sbjct: 357 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV 416

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF--- 249
           TYN L   L    +   ALK+F  M+     A+T TYN  I GLC  G I +A+ LF   
Sbjct: 417 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 476

Query: 250 -----------------------------RTLGILK---CELDIQAYNCLIDGLCKSGRL 277
                                        R L ++K   CE D   YN L+ G  K G+L
Sbjct: 477 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 536

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           E A   F+ +    L  + V+Y  +I G   DG++D A  L   MEE    PNV  +  +
Sbjct: 537 ESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAV 596

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           I+G  + N+ S+  ++  KM E+ ++P+    + ++D L
Sbjct: 597 INGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGL 635



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 104/296 (35%), Positives = 160/296 (54%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+ L+ +M++ G+QPS++TFN +++ L K GK+ EA  +L  + Q D+ P+ FTY++L+ 
Sbjct: 224 ARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLIL 283

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C    ++ A  +F  M   GC  + V+Y+ LING C    V+EAL +  EM+ KGI+P
Sbjct: 284 GHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEP 343

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           TV TY      L  I   E A++L   M++     +  TY   I GL + G +  A+ L+
Sbjct: 344 TVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLY 403

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +       +   YN LI+ LC  GR   AL++F  +     +A+  TYN +I GLC  
Sbjct: 404 HKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLG 463

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           G ++KA  LF  M +    P V+ + TLI+G++     +    LL  MKE    PD
Sbjct: 464 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPD 519



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 179/355 (50%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           NT++  L K   V+ A+ L+ QM    I P ++T+N+LI+ L       EA+ +  ++  
Sbjct: 209 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 268

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
             + P V T+  ++   C+N  +D A  + D MV+    PN+ TYSTL++G C  G+++ 
Sbjct: 269 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 328

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A ++   M   G +    +Y + I   C  +  EEA+ L   M  +G +P V TY  L  
Sbjct: 329 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 388

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           GL  + ++E A+ L+ +M ++ +  +T TYN  I+ LC  G    A+++F  +       
Sbjct: 389 GLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA 448

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           + Q YN +I GLC  G +E A+ LF  + +   +  VVTYN +I+G    G ++ A  L 
Sbjct: 449 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 508

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             M+EN   P+   +  L+ GF +  K         +M E  + P+    + ++D
Sbjct: 509 DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLID 563



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 169/355 (47%), Gaps = 11/355 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTYNT+I+G   +G V+ A  L   MK     PD  TYN L+ G         A   
Sbjct: 483 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 542

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM++ G+ P+ V++  ++D   K+GK+D A  LL+ M +    PN  +Y+ +++G   
Sbjct: 543 FQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSK 602

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             + + AE++   M   G   + ++Y  LI+G C+N   + A  ++ +M  +   P + T
Sbjct: 603 ENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 662

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y++L  GL +  + + A  L +EM+R  +A D  T+ + IDG    G I  A  L R + 
Sbjct: 663 YSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMV 722

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            + C+ + + Y+ L+ GL K   L         L  +V V     Y+   H    D   +
Sbjct: 723 DVGCKPNYRTYSVLLKGLQKECLL---------LEEKVAVQHEAVYSFSPHE--KDVNFE 771

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
              +L   M E    P +  + TL+ G  R  +  +  +L+  MKE+   PD  I
Sbjct: 772 IVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREI 826



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 141/289 (48%)

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
           E+   G   S+ + N ++ +L K   ++ A  L   M+   ++P+  T++TL++     G
Sbjct: 195 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 254

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           K+  AE +   +       D  +Y  LI G+C+N+ ++ A  ++  MV +G  P  VTY+
Sbjct: 255 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 314

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           TL  GL    +V+ AL + EEM    +     TY   I  LC   +  EA+EL   +   
Sbjct: 315 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 374

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
            C  ++Q Y  LI GL + G+LE+A+ L+  + +  LV + VTYN +I+ LC  G+   A
Sbjct: 375 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 434

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
             +F  ME +    N   +  +I G        K + L  KM +   +P
Sbjct: 435 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLP 483



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 135/270 (50%), Gaps = 5/270 (1%)

Query: 112 MVQRDVRPNAFTYS----TLMDGFCLTGK-INRAEELFGSMESMGCKHDDVSYNILINGY 166
           M+ R VR   F  +     LM   C   + I R  +    +  MG      S N L+   
Sbjct: 156 MLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQL 215

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
            K + VE A +LY++M++ GI+P+++T+NTL   L +  +V  A  +  ++ + D++ D 
Sbjct: 216 AKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDV 275

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            TY + I G C+N  +  A  +F  +    C+ +   Y+ LI+GLC  GR++ AL++   
Sbjct: 276 FTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEE 335

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +  + +   V TY + I  LC     ++A +L   M++    PNV  +  LI G  R+ K
Sbjct: 336 MIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK 395

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               I L HKM ++ ++P+    + +++ L
Sbjct: 396 LEVAIGLYHKMLKEGLVPNTVTYNALINEL 425



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 118/251 (47%), Gaps = 15/251 (5%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V CKPN  TY+ ++ GL KE        L L+ K    +  V +++       H  D 
Sbjct: 722 VDVGCKPNYRTYSVLLKGLQKE-------CLLLEEKVAVQHEAVYSFSP------HEKDV 768

Query: 68  NE--AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
           N      L   M + G +P++ T++ ++  LC+ G+  EA +L+  M +R   P+   Y 
Sbjct: 769 NFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYY 828

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           +L+   C   +++ A ++F S+E+ G +     Y  LI   CK  +VEEA +L+  M+ K
Sbjct: 829 SLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEK 888

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
                 + +  L  GL +  +++  +KL   M+  +   +  TY      L + G  +E+
Sbjct: 889 EWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIES 948

Query: 246 VELFRTLGILK 256
             L   L +LK
Sbjct: 949 EPLADKLKVLK 959


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/357 (34%), Positives = 192/357 (53%), Gaps = 1/357 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VT+N++++G+CK G ++ A+ +F +M  E + PD V+YN+L+ G C A   +EA  
Sbjct: 217 KPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALS 276

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM  +G+ P VVTF  ++  +CK G ++ A  L+  M +R ++ N  T++ L+DGFC
Sbjct: 277 VFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFC 336

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A      M     K   V YN LINGYC    ++EA  L  EM +KG+KP VV
Sbjct: 337 KKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVV 396

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+T+     +      A +L ++M    V  D  TY++ I  LC+   + +A  LF+ +
Sbjct: 397 TYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNM 456

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             L  + D   Y  LIDG CK G +E AL L   + +  ++ DVVTY+++I+GL    + 
Sbjct: 457 IKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARA 516

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            +A  L   +      P    +  L+H   R  +   V+ LL     K +M +A  V
Sbjct: 517 MEAQQLLFKLYHEEPIPANTKYDALMH-CCRKAELKSVLALLKGFCMKGLMNEADKV 572



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 186/361 (51%), Gaps = 1/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + YN ++  L  +  +  A+  F  M  + + P+V TYN LI  LC      EA  +
Sbjct: 114 PSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   G  P+VVT+N ++    + G++D A RL+ +M+   ++PN  T++++++G C 
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A ++F  M   G   D VSYN L+ GYCK     EALS++ EM  KGI P VVT
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           + +L   + +   +E A+ L  +M+   +  +  T+   IDG CK G++ +A+   R + 
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMR 352

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             + +  +  YN LI+G C  GR++ A EL   +  + L  DVVTY+ +I   C +    
Sbjct: 353 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 412

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A +L   M E  V P+ I + +LI       + S    L   M +  + PD    + ++
Sbjct: 413 SAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 472

Query: 374 D 374
           D
Sbjct: 473 D 473



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 193/359 (53%), Gaps = 6/359 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C PN VTYNT++    + G VD A+ L   M    + P++VT+NS+++G+C A    
Sbjct: 178 GAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKME 237

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A+++F EMM +G+ P  V++N ++   CK G   EA  +   M Q+ + P+  T+++L+
Sbjct: 238 DARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLI 297

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
              C  G +  A  L   M   G + ++V++  LI+G+CK   +++AL   R M    IK
Sbjct: 298 HVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIK 357

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P+VV YN L  G   + +++ A +L  EM+   +  D  TY+T I   CKN     A EL
Sbjct: 358 PSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFEL 417

Query: 249 FRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            + +   G+L    D   Y+ LI  LC+  RL  A  LF+++ +  L  D  TY  +I G
Sbjct: 418 NQQMLEKGVLP---DAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDG 474

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            C +G +++A  L   M +  V P+V+ +  LI+G  +  +  +  +LL K+  ++ +P
Sbjct: 475 HCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIP 533



 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 195/363 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN +I  LC  G   +A ++   M+G    P+VVTYN+L+     A + + A+RL
Sbjct: 148 PNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERL 207

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+D G++P++VTFN +++ +CK GKM++A ++ D M++  + P+  +Y+TL+ G+C 
Sbjct: 208 VGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCK 267

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A  +F  M   G   D V++  LI+  CK   +E A++L R+M  +G++   VT
Sbjct: 268 AGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVT 327

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  G  +   ++ AL     M++  +      YN  I+G C  G + EA EL   + 
Sbjct: 328 FTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEME 387

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+  Y+ +I   CK+     A EL + +  + ++ D +TY+ +I  LC + ++ 
Sbjct: 388 AKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLS 447

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            AH LF +M +  + P+   + +LI G  +     + + L  KM +  V+PD    S+++
Sbjct: 448 DAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLI 507

Query: 374 DLL 376
           + L
Sbjct: 508 NGL 510



 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 178/328 (54%), Gaps = 1/328 (0%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P V+ YN+++  L  A+    A+R F  M+  GV P+V T+N+++  LC  G   EA  +
Sbjct: 114 PSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
           L  M      PN  TY+TL+  F   G+++ AE L G M   G K + V++N ++NG CK
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             ++E+A  ++ EM+ +G+ P  V+YNTL  G  +      AL +F EM +  +  D  T
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           + + I  +CK G +  AV L R +     +++   +  LIDG CK G L+ AL   R + 
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMR 352

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
           +  +   VV YN +I+G C  G+MD+A +L  +ME   + P+V+ + T+I  + +     
Sbjct: 353 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 412

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVDLL 376
              EL  +M EK V+PDA   S ++ +L
Sbjct: 413 SAFELNQQMLEKGVLPDAITYSSLIRVL 440



 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 201/415 (48%), Gaps = 56/415 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+YNT++ G CK G   +A ++F +M  + I PDVVT+ SLIH +C A +   A  L
Sbjct: 253 PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTL 312

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M ++G+Q + VTF  ++D  CK G +D+A   +  M Q  ++P+   Y+ L++G+C+
Sbjct: 313 VRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCM 372

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A EL   ME+ G K D V+Y+ +I+ YCKN +   A  L ++M+ KG+ P  +T
Sbjct: 373 VGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAIT 432

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           Y++L   L E  ++  A  LF+ M +  +  D  TY + IDG CK G +  A+ L   + 
Sbjct: 433 YSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMV 492

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALEL--------------------------- 283
             G+L    D+  Y+ LI+GL KS R   A +L                           
Sbjct: 493 KAGVLP---DVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAE 549

Query: 284 -----------------------FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
                                  ++S+  R    D   Y+++IHG C  G + KA     
Sbjct: 550 LKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHK 609

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
            M +   APN    ++LI G        +  +++ ++     + DA     ++DL
Sbjct: 610 QMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDL 664



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 174/366 (47%), Gaps = 50/366 (13%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N VT+  +IDG CK+GF+D A      M+   I P VV YN+LI+G C     +EA+ L 
Sbjct: 324 NEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELL 383

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM  +G++P VVT++ I+   CKN     A  L   M+++ V P+A TYS+L+   C  
Sbjct: 384 HEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEE 443

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            +++ A  LF +M  +G + D+ +Y  LI+G+CK   VE ALSL+ +MV  G+ P VVTY
Sbjct: 444 KRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTY 503

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF---------------IDGLCKN 239
           + L  GL +  +   A +L  ++  ++     + Y+                 + G C  
Sbjct: 504 SVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMK 563

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G + EA ++++++      LD   Y+ LI G C++G +  AL   + + +R    +  + 
Sbjct: 564 GLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTST 623

Query: 300 NIMIHGL-----------------------------------CNDGQMDKAHDLFLDMEE 324
             +I GL                                    N+G +D   D+   M +
Sbjct: 624 ISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAK 683

Query: 325 NAVAPN 330
           + + P+
Sbjct: 684 DGLLPS 689



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 95/180 (52%), Gaps = 1/180 (0%)

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G  P+V+ YN + L L +   +  A + F+ M  D VA +  TYN  I  LC  G+  EA
Sbjct: 111 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           + + R +    C  ++  YN L+    ++G ++ A  L   +    L  ++VT+N M++G
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +C  G+M+ A  +F +M    +AP+ + + TL+ G+ +     + + +  +M +K +MPD
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 95/228 (41%), Gaps = 50/228 (21%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TY ++IDG CKEG V++A +L  +M    + PDVVTY+ LI+GL  +    EA++
Sbjct: 462 QPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQ 521

Query: 73  LFFEMMDQGVQPSVVTFNVIM---------------DELCKNGKMDEASR----LLDL-- 111
           L F++  +   P+   ++ +M                  C  G M+EA +    +LD   
Sbjct: 522 LLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNW 581

Query: 112 -----------------------------MVQRDVRPNAFTYSTLMDGFCLTGKINRAEE 142
                                        M+QR   PN+ +  +L+ G    G +  A++
Sbjct: 582 NLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQ 641

Query: 143 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   + +     D  +   LI+       V+  L +   M   G+ P+
Sbjct: 642 VIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 689


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 202/397 (50%), Gaps = 35/397 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+   YN +I+G CK   +D A  +  +M+ ++ +PD VTYN +I  LC     + A +
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +++    QP+V+T+ ++++     G +DEA +L+D M+ R ++P+ FTY+T++ G C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYN-------------------------------- 160
             G ++RA E+  ++E  GC+ D +SYN                                
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334

Query: 161 ---ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
              ILI   C++ ++EEA++L + M  KG+ P   +Y+ L        +++ A++  E M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
             D    D   YNT +  LCKNG   +A+E+F  LG + C  +  +YN +   L  SG  
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             AL +   +    +  D +TYN MI  LC +G +D+A +L +DM      P+V+ +  +
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + GF + ++    I +L  M      P+ +  +++++
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551



 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 175/310 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TYNTII G+CKEG VD+A  +   ++ +   PDV++YN L+  L +   W E ++
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 319

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M  +   P+VVT+++++  LC++GK++EA  LL LM ++ + P+A++Y  L+  FC
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ A E   +M S GC  D V+YN ++   CKN + ++AL ++ ++   G  P   
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNT+F  L+       AL +  EM  + +  D  TYN+ I  LC+ G + EA EL   +
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +    +  YN ++ G CK+ R+E A+ +  S+       +  TY ++I G+   G  
Sbjct: 500 RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYR 559

Query: 313 DKAHDLFLDM 322
            +A +L  D+
Sbjct: 560 AEAMELANDL 569



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 176/341 (51%), Gaps = 1/341 (0%)

Query: 27  CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           C+ G   ++  L   M  +  NPDV+    LI G     +  +A R+  E++++  QP V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
             +N +++  CK  ++D+A+R+LD M  +D  P+  TY+ ++   C  GK++ A ++   
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           + S  C+   ++Y ILI        V+EAL L  EM+S+G+KP + TYNT+  G+ +   
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           V+ A ++   ++      D  +YN  +  L   G   E  +L   +   KC+ ++  Y+ 
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LI  LC+ G++E A+ L + +  + L  D  +Y+ +I   C +G++D A +    M  + 
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             P+++ + T++    +  K  + +E+  K+ E    P++S
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 145/308 (47%), Gaps = 34/308 (11%)

Query: 92  IMDELCKNGKMDEASRLLDLMVQR----DV------------------------------ 117
           I    C++G   E+  LL+ MV++    DV                              
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
           +P+ F Y+ L++GFC   +I+ A  +   M S     D V+YNI+I   C   +++ AL 
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           +  +++S   +PTV+TY  L         V+ ALKL +EM    +  D  TYNT I G+C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           K G +  A E+ R L +  CE D+ +YN L+  L   G+ E   +L   +       +VV
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           TY+I+I  LC DG++++A +L   M+E  + P+   +  LI  F R  +    IE L  M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394

Query: 358 KEKKVMPD 365
                +PD
Sbjct: 395 ISDGCLPD 402



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 142/278 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ ++YN ++  L  +G  ++ + L  +M  E  +P+VVTY+ LI  LC      EA 
Sbjct: 294 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAM 353

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M ++G+ P   +++ ++   C+ G++D A   L+ M+     P+   Y+T++   
Sbjct: 354 NLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 413

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK ++A E+FG +  +GC  +  SYN + +    + +   AL +  EM+S GI P  
Sbjct: 414 CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDE 473

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYN++   L     V+ A +L  +M+  +      TYN  + G CK   I +A+ +  +
Sbjct: 474 ITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLES 533

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           +    C  +   Y  LI+G+  +G    A+EL   L R
Sbjct: 534 MVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 118/252 (46%), Gaps = 37/252 (14%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY+ +I  LC++G +++A  L   MK + + PD  +Y+ LI   C     + A 
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA-------------------------- 105
                M+  G  P +V +N ++  LCKNGK D+A                          
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448

Query: 106 ------SRLLDL---MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
                  R L +   M+   + P+  TY++++   C  G ++ A EL   M S       
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL-FEIHQVEHALKLFE 215
           V+YNI++ G+CK   +E+A+++   MV  G +P   TY  L  G+ F  ++ E A++L  
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE-AMELAN 567

Query: 216 EMQRDDVAADTS 227
           ++ R D  ++ S
Sbjct: 568 DLVRIDAISEYS 579



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 122/245 (49%), Gaps = 1/245 (0%)

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +G    +  L  +M   G   D +    LI G+   + + +A+ +  E++ K  +P V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             YN L  G  ++++++ A ++ + M+  D + DT TYN  I  LC  G +  A+++   
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L    C+  +  Y  LI+     G ++ AL+L   +  R L  D+ TYN +I G+C +G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A ++  ++E     P+VI +  L+   +   K  +  +L+ KM  +K  P+    S+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 372 VVDLL 376
           ++  L
Sbjct: 339 LITTL 343



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 2/138 (1%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE+G  C PN+ +YNT+   L   G   +A  + L+M    I+PD +TYNS+I  LC   
Sbjct: 430 GEVG--CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             +EA  L  +M      PSVVT+N+++   CK  ++++A  +L+ MV    RPN  TY+
Sbjct: 488 MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547

Query: 126 TLMDGFCLTGKINRAEEL 143
            L++G    G    A EL
Sbjct: 548 VLIEGIGFAGYRAEAMEL 565


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/335 (35%), Positives = 184/335 (54%), Gaps = 1/335 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VT N++IDGLCK   +DKA+A+  QM  E+I P+  TYNSLIHG   +  W EA R+
Sbjct: 154 PNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRI 213

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G +P+VVT+N+++D LCK+G   EA  + + M+Q   +P+A TY +L+ G+  
Sbjct: 214 LKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYAT 273

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +     +   M   G + +  +++I I  YCK   ++EA   + +M   G  P +VT
Sbjct: 274 EGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVT 333

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y T+  GL +I +++ A+  F +M  D ++ +  T+ T I G    G   +A ELF  + 
Sbjct: 334 YTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMM 393

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+  +  +ID L K G++  A +LF  +PR     +VV+YN MIHG    G++ 
Sbjct: 394 DRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVG 453

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN-KP 347
           +   L  DM    + P  + F TL+ G V +  KP
Sbjct: 454 EVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKP 488



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 187/356 (52%), Gaps = 2/356 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMK--GENINPDVVTYNSLIHGLCHANDWNE 69
           C P+  +Y+T++ GLC E   ++A  L   M   G+N  PDVV+Y+++IHG     D  +
Sbjct: 80  CTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGK 139

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  LF +M+D G+ P+VVT N ++D LCK   MD+A  +L  M+   + PN  TY++L+ 
Sbjct: 140 AYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIH 199

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+  +G+   A  +   M   G + + V+YN+LI+  CK+    EA  ++  M+  G KP
Sbjct: 200 GYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKP 259

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
              TY +L  G      +     + + M ++ + ++  T++  I   CK G + EA   F
Sbjct: 260 DATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTF 319

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +  L    DI  Y  +IDGLCK GRL+ A+  F  +    L  +++T+  +IHG    
Sbjct: 320 IKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMY 379

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           G+ +KA +LF +M +  + P+V IF  +I    +  K ++  +L   M      P+
Sbjct: 380 GKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPN 435



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 193/401 (48%), Gaps = 38/401 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+  +I   C  G ++   A   Q+    +  D V +  L+  LC     ++A  +
Sbjct: 11  PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR--DVRPNAFTYSTLMDG 130
               M + G  P V +++ ++  LC   K +EA+ L+ +M +   +  P+  +YST++ G
Sbjct: 71  VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           F   G + +A  LF  M   G   + V+ N +I+G CK + +++A ++ ++M+ + I P 
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             TYN+L  G     Q   A+++ +EM RD    +  TYN  ID LCK+G+  EA E+F 
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFN 250

Query: 251 TLGILKCELDIQAYNCLIDGL-----------------------------------CKSG 275
           ++     + D   Y  L+ G                                    CK G
Sbjct: 251 SMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCG 310

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           RL+ A   F  + +   + D+VTY  +I GLC  G++D A   F  M ++ ++PN+I F 
Sbjct: 311 RLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFT 370

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           TLIHGF    K  K  EL ++M ++ + PD +I + ++D L
Sbjct: 371 TLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRL 411



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 145/324 (44%), Gaps = 51/324 (15%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG------------ 60
           +PN VTYN +ID LCK GF  +A+ +F  M      PD  TY SL+HG            
Sbjct: 223 RPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNN 282

Query: 61  -----------------------LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
                                   C     +EA   F +M   G  P +VT+  ++D LC
Sbjct: 283 VKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLC 342

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K G++D+A      M+   + PN  T++TL+ GF + GK  +AEELF  M   G   D  
Sbjct: 343 KIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVT 402

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            +  +I+   K  +V EA  L+  M   G KP VV+YNT+  G F   +V   +KL ++M
Sbjct: 403 IFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDM 462

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
               +     T+NT +DG+   G                 + D+     LID  C+ GR+
Sbjct: 463 LLIGLKPTAVTFNTLLDGMVSMGL----------------KPDVDTCKTLIDSCCEDGRI 506

Query: 278 EIALELFRSLPRRVLVADVVTYNI 301
           E  L LFR +  +    D +T NI
Sbjct: 507 EDILTLFREMLGKADKTDTITENI 530


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 192/364 (52%), Gaps = 9/364 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTY ++I G C EG   KA  ++ +M  + I+P+  T+ ++I GLC AN   EA RL
Sbjct: 295 PTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRL 354

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM ++ + PS VT+NV+++  C++G + EA  LLD MV +   P+ +TY  L+ G C 
Sbjct: 355 FGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCS 414

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A+E    +     K +++ Y+ L++GYCK    ++A+S  R MV +G+   +V 
Sbjct: 415 VGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVC 474

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G    H       L +EM    +  D   Y   ID   K G + EA  L+  + 
Sbjct: 475 YAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMV 534

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV----VTYNIMIHGLCND 309
              C  ++  Y  LI+GLCK+G ++ A EL   L +  LV+DV    +TY   +  L   
Sbjct: 535 DEGCLPNVVTYTALINGLCKAGLMDKA-EL---LSKETLVSDVTPNHITYGCFLDHLTRG 590

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G M+KA  L   M +  +A  V  +  LI GF R+ K  +  +LLH M +  ++PD    
Sbjct: 591 GNMEKAVQLHHAMLKGFLATTV-SYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITY 649

Query: 370 SMVV 373
           S ++
Sbjct: 650 STII 653



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 185/388 (47%), Gaps = 26/388 (6%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN------- 65
           +P+   Y+ ++  LC+    +KAK +   M+       +V YN LIHGLC +        
Sbjct: 128 QPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALE 187

Query: 66  -------------------DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
                               +NEA+ LF EM ++G+  + +T+++++D  C+ G+MD A 
Sbjct: 188 IKNCLMQKGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAI 247

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
             LD M +  +    + Y++L++G+C  G  + A+  F  M   G     V+Y  LI+GY
Sbjct: 248 GFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGY 307

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           C   E  +A  +Y EM +KGI P   T+  +  GL   + +  A++LF EM+   +    
Sbjct: 308 CNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSE 367

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            TYN  I+G C++G I EA  L   +       D   Y  LI GLC  GR+  A E    
Sbjct: 368 VTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDD 427

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           L +     + + Y+ ++HG C +G+   A      M E  VA +++ +  LI G  R + 
Sbjct: 428 LHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHD 487

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVD 374
              +  LL +M    + PDA I + ++D
Sbjct: 488 TRALFGLLKEMHNHGLRPDAVIYTNMID 515



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 180/387 (46%), Gaps = 26/387 (6%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   T + +++GL +    +    LF  +   N+ PD+  Y++++  LC   D+N+AK +
Sbjct: 94  PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEM 153

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKN--------------------------GKMDEASR 107
              M     + S+V +NV++  LCK+                          GK +EA  
Sbjct: 154 IHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAEL 213

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
           L   M ++ +  N  TYS L+D FC  G+++ A      M     +     YN LINGYC
Sbjct: 214 LFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYC 273

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           K      A   + EM+ KG+ PTVVTY +L  G     +   A K++ EM    ++ +T 
Sbjct: 274 KLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTY 333

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           T+   I GLC+   + EA+ LF  +   K       YN +I+G C+SG +  A  L   +
Sbjct: 334 TFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEM 393

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
             +  V D  TY  +I GLC+ G++ +A +   D+ ++    N + +  L+HG+ +  + 
Sbjct: 394 VGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRF 453

Query: 348 SKVIELLHKMKEKKVMPDASIVSMVVD 374
              +     M E+ V  D    ++++D
Sbjct: 454 KDAVSACRVMVERGVAMDLVCYAILID 480



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 151/298 (50%), Gaps = 9/298 (3%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M D  + P V T + +++ L +  + ++   L D +V  +V+P+ + YS ++   C    
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
            N+A+E+   ME   CK   V YN+LI+G CK++ + EAL +   ++ KG++  VVTY  
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYG 206

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
            F           A  LF+EM    + A+  TY+  ID  C+ G +  A+     +    
Sbjct: 207 KF---------NEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKAS 257

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            E  +  YN LI+G CK G    A   F  +  + L   VVTY  +I G CN+G+  KA 
Sbjct: 258 IEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAF 317

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            ++ +M    ++PN   F  +I G  R N  ++ I L  +MKE+K+MP     +++++
Sbjct: 318 KVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIE 375



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 75/389 (19%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNT T+  II GLC+   + +A  LF +MK   I P  VTYN +I G C + + +EA  L
Sbjct: 330 PNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHL 389

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+ +G  P   T+  ++  LC  G++ EA   +D + +   + N   YS L+ G+C 
Sbjct: 390 LDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCK 449

Query: 134 TGKINRA--------------------------------EELFGSMESM---GCKHDDVS 158
            G+   A                                  LFG ++ M   G + D V 
Sbjct: 450 EGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVI 509

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y  +I+ + K   ++EA  L+  MV +G  P VVTY  L  GL +   ++ A  L +E  
Sbjct: 510 YTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETL 569

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL--GILKCELDIQAYNCLIDGLCKSGR 276
             DV  +  TY  F+D L + G + +AV+L   +  G L   +   +YN LI G C+ G+
Sbjct: 570 VSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTV---SYNILIRGFCRLGK 626

Query: 277 LEIA-----------------------------------LELFRSLPRRVLVADVVTYNI 301
           +E A                                   ++L+ ++  + L  D + Y+ 
Sbjct: 627 IEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSF 686

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           ++HG C  G+++KA +L  +M    +  N
Sbjct: 687 LVHGCCIAGELEKAFELRDEMIRRGMRSN 715



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 142/286 (49%), Gaps = 1/286 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N + Y+ ++ G CKEG    A +    M    +  D+V Y  LI G    +D      
Sbjct: 434 KLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFG 493

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM + G++P  V +  ++D   K G + EA  L D+MV     PN  TY+ L++G C
Sbjct: 494 LLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLC 553

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +++AE L           + ++Y   ++   +   +E+A+ L+  M+ KG   T V
Sbjct: 554 KAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAML-KGFLATTV 612

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YN L  G   + ++E A KL   M  +D+  D  TY+T I   CK   + EA++L+ T+
Sbjct: 613 SYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTM 672

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
                + D  AY+ L+ G C +G LE A EL   + RR + ++ VT
Sbjct: 673 LDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718



 Score =  117 bits (293), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 105/182 (57%), Gaps = 1/182 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY  +I+GLCK G +DKA+ L  +    ++ P+ +TY   +  L    +  +A 
Sbjct: 538 CLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAV 597

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M+ +G   + V++N+++   C+ GK++EA++LL  M   D+ P+  TYST++   
Sbjct: 598 QLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQ 656

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    +  A +L+ +M   G K D ++Y+ L++G C   E+E+A  L  EM+ +G++   
Sbjct: 657 CKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNH 716

Query: 192 VT 193
           VT
Sbjct: 717 VT 718



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 86/183 (46%), Gaps = 9/183 (4%)

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
           R M    + P V T + L  GL    +    L LF+++   +V  D   Y+  +  LC+ 
Sbjct: 85  RLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCEL 144

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
               +A E+   +   +C+L I  YN LI GLCKS R+  ALE+   L ++ L A+VVTY
Sbjct: 145 KDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY 204

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
                     G+ ++A  LF +M E  +  N I +  LI  F R  +    I  L KM +
Sbjct: 205 Y---------GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTK 255

Query: 360 KKV 362
             +
Sbjct: 256 ASI 258


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 185/352 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+   Y T++DG+CKEG ++ A  +  +M    + P+VV YN+++ GLC A  W +A+
Sbjct: 291 CTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAE 350

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM D       VTFN+++D  C+NG +     LL+ M++    P+  TY+T+++GF
Sbjct: 351 ELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGF 410

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I+ A  L  SM + GC+ + +SY I++ G C  +   +A  L  +M+ +G  P  
Sbjct: 411 CKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNP 470

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NT+   L +   VE A++L ++M  +  + D  +Y+T IDGL K G   EA+EL   
Sbjct: 471 VTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNV 530

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       +   Y+ +   L K GR+   +++F ++    + +D V YN +I  LC  G 
Sbjct: 531 MVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGG 590

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            D+A +    M  +   PN   +  LI G        +  E+L ++  K  +
Sbjct: 591 TDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 642



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 189/365 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V+YN ++ GLC      + + L  +M      P+VVT+N+LI  LC    +    
Sbjct: 221 CDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVH 280

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++  +M+D G  P +  +  ++D +CK G ++ A  +LD M    ++PN   Y+T++ G 
Sbjct: 281 QVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGL 340

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +  +AEEL   M    C  DDV++NIL++ +C+N  V   + L  +M+  G  P V
Sbjct: 341 CSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDV 400

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY T+  G  +   ++ A+ L + M       +T +Y   + GLC     V+A +L   
Sbjct: 401 ITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQ 460

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  +   +N +I+ LCK G +E A+EL + +       D+++Y+ +I GL   G+
Sbjct: 461 MIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGK 520

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D+A +L   M    ++PN II+ ++     +  + ++VI++   +++  +  DA + + 
Sbjct: 521 TDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNA 580

Query: 372 VVDLL 376
           V+  L
Sbjct: 581 VISSL 585



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 172/370 (46%), Gaps = 5/370 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFV---DKAKALFLQMKGENINPDVVTYNSLIHGLC-HANDW 67
           C P    Y+ I++  C  G       A  +   + G     DV   N +++ +C      
Sbjct: 146 CAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSV 205

Query: 68  NEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           +EA RL  ++    G  P VV++N ++  LC   +      L++ MV+    PN  T++T
Sbjct: 206 DEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNT 265

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+   C  G   R  ++   M   GC  D   Y  +++G CK   +E A  +   M S G
Sbjct: 266 LIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYG 325

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +KP VV YNT+  GL    + E A +L  EM  +D   D  T+N  +D  C+NG +   +
Sbjct: 326 LKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVI 385

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           EL   +    C  D+  Y  +I+G CK G ++ A+ L +S+       + ++Y I++ GL
Sbjct: 386 ELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGL 445

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C+  +   A DL   M E   +PN + F T+I+   +     + IELL +M      PD 
Sbjct: 446 CSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDL 505

Query: 367 SIVSMVVDLL 376
              S V+D L
Sbjct: 506 ISYSTVIDGL 515



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 171/368 (46%), Gaps = 5/368 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH---ANDWNEA 70
           PN  TY  ++  LC  G +  A ++  +M+     P    Y+ ++   C       +  A
Sbjct: 113 PNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSA 172

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELC-KNGKMDEASRLL-DLMVQRDVRPNAFTYSTLM 128
            R+  ++  +G    V   N++++ +C + G +DEA RLL DL       P+  +Y+ ++
Sbjct: 173 VRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVL 232

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C+  +  R ++L   M  +GC  + V++N LI   C+N   E    +  +MV  G  
Sbjct: 233 KGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCT 292

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P +  Y T+  G+ +   +E A ++ + M    +  +   YNT + GLC      +A EL
Sbjct: 293 PDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEEL 352

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +    C LD   +N L+D  C++G +   +EL   +     V DV+TY  +I+G C 
Sbjct: 353 LAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCK 412

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           +G +D+A  L   M      PN I +  ++ G     +     +L+ +M E+   P+   
Sbjct: 413 EGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVT 472

Query: 369 VSMVVDLL 376
            + V++ L
Sbjct: 473 FNTVINFL 480



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 160/326 (49%), Gaps = 8/326 (2%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           YN+++ G C A     A+RL   +    V P+  T+  ++  LC  G++ +A  +LD M 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASV---PVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 114 QRDVRPNAFTYSTLMDGFC---LTGKINRAEELFGSMESMGCKHDDVSYNILINGYC-KN 169
           +R   P    Y  +++  C     G    A  +   +   GC  D  + N+++N  C + 
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 170 KEVEEALSLYREM-VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             V+EAL L R++  S G  P VV+YN +  GL    +      L EEM R     +  T
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           +NT I  LC+NG      ++   +    C  DI+ Y  ++DG+CK G LE+A E+   +P
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
              L  +VV YN ++ GLC+  + ++A +L  +M +N    + + F  L+  F +     
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVD 374
           +VIELL +M E   +PD    + V++
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVIN 408



 Score = 44.3 bits (103), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 32/72 (44%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           V  + + V YN +I  LCK G  D+A      M      P+  TY  LI GL       E
Sbjct: 569 VTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKE 628

Query: 70  AKRLFFEMMDQG 81
           A+ +  E+  +G
Sbjct: 629 AQEMLTELCSKG 640


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 204/399 (51%), Gaps = 39/399 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMK-GENINPDVVTYNSLIHGLCHANDWNEAKR 72
           P+  T + +++ L   G +D A+ +F +M+ G+ + PDV TY ++I  LC A + + A  
Sbjct: 173 PSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFA 232

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  E+   G+QP+VVT+NV+MD LCK+G+++EA RL   MV+  VRP+  T+  L+ G  
Sbjct: 233 MLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLA 292

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +      +   M+  G   ++V YN +I  +C+     EAL L+ EMVSKGIK TVV
Sbjct: 293 RGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVV 352

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF-------------------- 232
           TYN +   L +  ++EHA K+ +EM    +    S +N+                     
Sbjct: 353 TYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIRE 412

Query: 233 ----------------IDGLCKNGYIVEAVEL-FRTLGILKCELDIQAYNCLIDGLCKSG 275
                           I  LCK+G   EA E+ F+ LG     +++   N LI GLC+  
Sbjct: 413 MLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLG-KGLGVNVATSNALIHGLCQGN 471

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
            ++ A ++ +++    +  D +TYNIMI G C   +MD+A  L  DM +    P++  F 
Sbjct: 472 NMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFN 531

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +H +  + K  +++ LL +MK + + PD      ++D
Sbjct: 532 IFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIID 570



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 189/362 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN       I  LCK G  ++A  ++ Q+ G+ +  +V T N+LIHGLC  N+  EA +
Sbjct: 419 KPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATK 478

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M++ GV+   +T+N+++   CK  KMDEA +L D M++R  +P+ FT++  +  +C
Sbjct: 479 VLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYC 538

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+     L   M+S G K D V+Y  +I+GYCK K++ +A     E++  G++P  V
Sbjct: 539 NLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAV 598

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN L  G      +  A+ + + M+ + +     TYN+ +  +C  G + E   +F   
Sbjct: 599 IYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQC 658

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +   EL +  Y  +I G CK G+++ A+  F+ +  R +  + +TY  ++      G  
Sbjct: 659 IVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNK 718

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A  LF +M    + P+ + + TLI GF  ++   K++E   +M  + +  D    +  
Sbjct: 719 EEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAF 778

Query: 373 VD 374
           VD
Sbjct: 779 VD 780



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 179/390 (45%), Gaps = 36/390 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKA----------------------------------- 37
           K   VTYN I   LCKEG ++ A+                                    
Sbjct: 348 KQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVL 407

Query: 38  -LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
            L  +M    + P+     + I  LC +    EA  ++F+++ +G+  +V T N ++  L
Sbjct: 408 RLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGL 467

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           C+   M EA+++L  MV   V  +  TY+ ++ G C   K++ A +L   M   G K D 
Sbjct: 468 CQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDL 527

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            ++NI ++ YC   +VEE L L  +M S+G+KP +VTY T+  G  +   +  A +   E
Sbjct: 528 FTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTE 587

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           + ++ +  +   YN  I G  +NG I +A+ +  T+     +     YN L+  +C +G 
Sbjct: 588 LMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGL 647

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +E    +F     + +   V+ Y I+I G C  G++D+A   F +M    + PN + + T
Sbjct: 648 VEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTT 707

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           L+  + +     +  +L  +M    ++PD+
Sbjct: 708 LMFAYSKSGNKEEASKLFDEMVSLGIVPDS 737



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 136/259 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  T+N  +   C  G V++   L  QMK E + PD+VTY ++I G C A D ++A  
Sbjct: 524 KPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANE 583

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              E+M  G++P+ V +N ++    +NG + +A  +LD M    ++P   TY++LM   C
Sbjct: 584 YLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMC 643

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +   + +F        +   + Y I+I G+CK  +++EA+  ++EM S+GI P  +
Sbjct: 644 HAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKM 703

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL     +    E A KLF+EM    +  D+ +YNT I G C+   + + VE    +
Sbjct: 704 TYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEM 763

Query: 253 GILKCELDIQAYNCLIDGL 271
                + D  +YN  +DG+
Sbjct: 764 SSQVLKQDGCSYNAFVDGI 782



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 171/363 (47%), Gaps = 36/363 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VT+  +I GL +     +  A+  +M+G  I P+ V YN +I   C     +EA +
Sbjct: 278 RPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALK 337

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV------------------- 113
           LF EM+ +G++ +VVT+N+I   LCK G+M+ A ++LD M+                   
Sbjct: 338 LFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHL 397

Query: 114 -----------------QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
                             R ++PN    +  +   C +GK   A E++  +   G   + 
Sbjct: 398 RGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNV 457

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            + N LI+G C+   ++EA  + + MV+ G++   +TYN +  G  +  +++ A++L ++
Sbjct: 458 ATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDD 517

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M +     D  T+N F+   C  G + E + L   +     + DI  Y  +IDG CK+  
Sbjct: 518 MIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKD 577

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +  A E    L +  L  + V YN +I G   +G +  A  +   M+ N + P  + + +
Sbjct: 578 MHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNS 637

Query: 337 LIH 339
           L++
Sbjct: 638 LMY 640



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 147/292 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + +TYN +I G CK   +D+A  L   M      PD+ T+N  +H  C+     E   L 
Sbjct: 491 DRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLL 550

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M  +G++P +VT+  I+D  CK   M +A+  L  +++  +RPNA  Y+ L+ G+   
Sbjct: 551 DQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRN 610

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G I+ A  +  +M+  G +   V+YN L+   C    VEE  +++ + + K I+  V+ Y
Sbjct: 611 GNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGY 670

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             +  G  +I +++ A+  F+EM    +  +  TY T +    K+G   EA +LF  +  
Sbjct: 671 TIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVS 730

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           L    D  +YN LI G C+   L+  +E    +  +VL  D  +YN  + G+
Sbjct: 731 LGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGI 782



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 142/327 (43%), Gaps = 37/327 (11%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ-RDVRPNAFTYST 126
           + A   F E+  +G  PS+ T +++++ L   G++D A ++   M   + V P+  TY+ 
Sbjct: 157 SRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTA 216

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++   C  G+I+ A  +   +   G +   V+YN+L++  CK+  VEEA  L   MV   
Sbjct: 217 MIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGR 276

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           ++P++VT+  L  GL    Q      + +EMQ   +  +   YN  I   C+ G+  EA+
Sbjct: 277 VRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEAL 336

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCK--------------------------------- 273
           +LF  +     +  +  YN +   LCK                                 
Sbjct: 337 KLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWH 396

Query: 274 ---SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
              +GRL++ L L R +  R L  +       I  LC  G+ ++A +++  +    +  N
Sbjct: 397 LRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVN 456

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKM 357
           V     LIHG  + N   +  ++L  M
Sbjct: 457 VATSNALIHGLCQGNNMKEATKVLKAM 483



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 91/167 (54%), Gaps = 4/167 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VTYN+++  +C  G V++ KA+F Q   ++I   V+ Y  +I G C     +EA  
Sbjct: 629 QPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVM 688

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM  +G+ P+ +T+  +M    K+G  +EAS+L D MV   + P++ +Y+TL+ GFC
Sbjct: 689 YFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFC 748

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILING----YCKNKEVEEA 175
               +++  E    M S   K D  SYN  ++G    +C+ + V  A
Sbjct: 749 EVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGITTPWCQKEAVSNA 795



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 120/264 (45%), Gaps = 12/264 (4%)

Query: 105 ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
           + R+  L++Q  V   A    +L     L  ++ R   L  +  ++   H   + ++L+ 
Sbjct: 90  SPRVSTLLLQSLVADRA----SLPSARRLVSRLLRFNPLSVAAAAIADSHCTATADLLVR 145

Query: 165 GYCKNKEVEEALS----LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
             C N     +LS     + E+ ++G  P++ T + L   L    Q++ A K+F EM RD
Sbjct: 146 A-CLNSPAPGSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEM-RD 203

Query: 221 D--VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              VA D  TY   I  LC+ G I  A  +   L     +  +  YN L+D LCKSGR+E
Sbjct: 204 GKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVE 263

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A  L   +    +   +VT+ I+I GL    Q  +   +  +M+   + PN +I+  +I
Sbjct: 264 EAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMI 323

Query: 339 HGFVRINKPSKVIELLHKMKEKKV 362
               R    S+ ++L  +M  K +
Sbjct: 324 GWHCRKGHCSEALKLFDEMVSKGI 347


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 201/433 (46%), Gaps = 70/433 (16%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  +YN +I GL K G    A  LF +M  + + P+ +TYN++I G     D     RL
Sbjct: 186 PNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRL 245

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG--- 130
           + +M+  G++P+V+T+NV++  LC+ G+M E + +LD M  R + P+ FTYS L DG   
Sbjct: 246 WSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSR 305

Query: 131 --------------------------------FCLTGKINRAEELFGSMESMGCKHDDVS 158
                                            C  GKI++AEE+  ++ + G     V 
Sbjct: 306 TGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVI 365

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN LINGYC+  ++E A S++++M S+ I+P  +TYN L  GL ++ ++  A  L  EM+
Sbjct: 366 YNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEME 425

Query: 219 RDDVAADTSTYNTFIDG-----------------------------------LCKNGYIV 243
           ++ V     T+NT ID                                     CKNG I+
Sbjct: 426 KNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKIL 485

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           EAV +   + I       Q YN +ID   + G  + A  L   +    +   +VTYN++I
Sbjct: 486 EAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLI 545

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            GLC   Q+ +A +L   +    +AP+VI + TLI      +   + +EL  +M +  + 
Sbjct: 546 KGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIK 605

Query: 364 PDASIVSMVVDLL 376
           P      M+   L
Sbjct: 606 PSPRTYRMLFSSL 618



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 176/334 (52%), Gaps = 7/334 (2%)

Query: 36  KALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM-MDQGVQPSVVTFNVIMD 94
           +  F  +      PD  T+N  +     A D +EA  +   M  D    P+  ++NV++ 
Sbjct: 137 RGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIA 196

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            L K G   +A +L D M ++ V PN  TY+T++DG    G +     L+  M   G K 
Sbjct: 197 GLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKP 256

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           + ++YN+L++G C+   + E  ++  EM S+ + P   TY+ LF G       +  L LF
Sbjct: 257 NVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLF 316

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGL 271
           EE  +  V     T +  ++GLCK+G I +A E+ +TL   G+L+  +    YN LI+G 
Sbjct: 317 EESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTV---IYNTLINGY 373

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C+ G LE A  +F+ +  R++  D +TYN +I+GL    ++ +AHDL ++ME+N V P+V
Sbjct: 374 CQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSV 433

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             F TLI  + R  +  K   +L  M+EK + P+
Sbjct: 434 ETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPN 467



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 186/368 (50%), Gaps = 1/368 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN-PDVVTYNSLIHGLCHAND 66
           +    +P+T T+N  +      G +D+A  +  +M  +    P+  +YN +I GL  A  
Sbjct: 144 VAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGT 203

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A +LF EM ++ V P+ +T+N ++D   K G ++   RL   M++  ++PN  TY+ 
Sbjct: 204 DCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNV 263

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ G C  G++     +   M S     D  +Y+IL +G+ +  + +  LSL+ E V KG
Sbjct: 264 LLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKG 323

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +K    T + L  GL +  ++  A ++ + +    +   T  YNT I+G C+ G +  A 
Sbjct: 324 VKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAF 383

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            +F+ +       D   YN LI+GL K  R+  A +L   + +  +   V T+N +I   
Sbjct: 384 SIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAY 443

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              GQ++K   +  DM+E  + PNV+ + ++++ F +  K  + + +L  M  K V+P A
Sbjct: 444 GRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGA 503

Query: 367 SIVSMVVD 374
            + + ++D
Sbjct: 504 QVYNAIID 511



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 174/350 (49%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K    T + +++GLCK+G + KA+ +   +    +    V YN+LI+G C   D   A  
Sbjct: 325 KIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFS 384

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +M  + ++P  +T+N +++ L K  ++ EA  L+  M +  V P+  T++TL+D + 
Sbjct: 385 IFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYG 444

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++ +   +   M+  G K + VSY  ++N +CKN ++ EA+++  +M  K + P   
Sbjct: 445 RAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQ 504

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN +     E    + A  L E+M+   V     TYN  I GLCK   I EA EL  +L
Sbjct: 505 VYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSL 564

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D+ +YN LI   C     + ALEL + + +  +     TY ++   L   G++
Sbjct: 565 RNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRV 624

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
            +  +L+  M +  V P   I+  ++  + +  + SKV  L  +M +K +
Sbjct: 625 HEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGI 674



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 159/314 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
            TV YNT+I+G C+ G ++ A ++F QMK   I PD +TYN+LI+GL       EA  L 
Sbjct: 362 TTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLV 421

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM   GV PSV TFN ++D   + G++++   +L  M ++ ++PN  +Y ++++ FC  
Sbjct: 422 IEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKN 481

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GKI  A  +   M           YN +I+ Y +    ++A  L  +M S G+ P++VTY
Sbjct: 482 GKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTY 541

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L  GL +  Q+  A +L + ++   +A D  +YNT I   C       A+EL + +  
Sbjct: 542 NLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWK 601

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              +   + Y  L   L  +GR+     L++ +  + +V     YNIM+      G+  K
Sbjct: 602 CGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESK 661

Query: 315 AHDLFLDMEENAVA 328
              L  +M +  +A
Sbjct: 662 VEALRKEMSDKGIA 675



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 105/219 (47%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V+Y +I++  CK G + +A A+   M  +++ P    YN++I         ++A  
Sbjct: 465 KPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFM 524

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M   GV PS+VT+N+++  LCK  ++ EA  LLD +    + P+  +Y+TL+   C
Sbjct: 525 LAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACC 584

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                +RA EL   M   G K    +Y +L +       V E  +LY++M+ K + P   
Sbjct: 585 YRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSG 644

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
            YN +     +  +      L +EM    +A    T  T
Sbjct: 645 IYNIMVDAYAKCGEESKVEALRKEMSDKGIAVGDYTSMT 683


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/427 (31%), Positives = 212/427 (49%), Gaps = 64/427 (14%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           + +G G  GV  +PN V YNT+I   C+EG  ++A+ L  +M+ + + PDVVT+NS I  
Sbjct: 208 LLDGMGSFGV--QPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISA 265

Query: 61  LCHANDWNEAKRLFFEM-MDQGV---QPSVVTFNVIMDELCK------------------ 98
           LC A    EA R+F +M +D+ +   +P++ TFN++++  CK                  
Sbjct: 266 LCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNG 325

Query: 99  -----------------NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
                            NGK+ EA   L  MV + + PN ++++T+MDG C  G I+ A 
Sbjct: 326 NLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDAR 385

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
            + G M S G   D V+Y+ L++G C   +V +A ++  EM+ +G  P   T N L   L
Sbjct: 386 MIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSL 445

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI------- 254
           ++  ++  A KL ++M       D  T N  IDGLCK+G + EAVE+   + I       
Sbjct: 446 WKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALG 505

Query: 255 ----------------LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
                            KC  D+  Y+ +I+GLCK+GRL+ A + F  +  + L  D + 
Sbjct: 506 NLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSII 565

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y+  IH  C  G++  A  +  DME+     ++  + +LI G    N+  ++  LL  MK
Sbjct: 566 YDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMK 625

Query: 359 EKKVMPD 365
           EK + P+
Sbjct: 626 EKGITPN 632



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 125/411 (30%), Positives = 197/411 (47%), Gaps = 62/411 (15%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN  ++  ++ G C+ G   +A  L   M    + P+ V YN+LI   C      EA+
Sbjct: 182 CRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAE 241

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDV---RPNAFTYSTL 127
           RL   M + G+ P VVTFN  +  LC  GK+ EASR+  D+ +  ++   RPN  T++ +
Sbjct: 242 RLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLM 301

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++GFC  G +  A+ L  SM+  G   +  SYNI + G  +N ++ EA    +EMV KGI
Sbjct: 302 LEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGI 361

Query: 188 KPTV-----------------------------------VTYNTLFLGLFEIHQVEHALK 212
           +P +                                   VTY+TL  G     +V  A  
Sbjct: 362 EPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANN 421

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           +  EM R   + +T T N  +  L K G I EA +L + +     +LD    N +IDGLC
Sbjct: 422 ILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLC 481

Query: 273 KSGRLEIALELFR-----------------------SLPRRVLVADVVTYNIMIHGLCND 309
           KSG+L+ A+E+                         S   +  + D++TY+I+I+GLC  
Sbjct: 482 KSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKA 541

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           G++D+A   F++M   ++ P+ II+ T IH F +  K S    +L  M+++
Sbjct: 542 GRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKR 592



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 185/389 (47%), Gaps = 58/389 (14%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  T+N +++G CKEG +++AK L   MK      ++ +YN  + GL       EA+ 
Sbjct: 292 RPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQL 351

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              EM+D+G++P++ +FN +MD LCKNG + +A  ++ LM+   + P+  TYSTL+ G C
Sbjct: 352 ALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCC 411

Query: 133 LTGKINRAEELFGSMESMGCKH-----------------------------------DDV 157
            TGK+ +A  +   M   GC                                     D+V
Sbjct: 412 STGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNV 471

Query: 158 SYNILINGYCKNKEVEEALSLYREM---------------------VSKGIK--PTVVTY 194
           + NI+I+G CK+ +++EA+ +   M                      S G K  P ++TY
Sbjct: 472 TCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITY 531

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + +  GL +  +++ A K F EM    +  D+  Y+TFI   CK+G I  A  + + +  
Sbjct: 532 SIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEK 591

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C   +Q YN LI GL    ++     L   +  + +  ++ TYN MI  LC  G++  
Sbjct: 592 RGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKD 651

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           A  L  +M +  ++PN+  F  LI  F +
Sbjct: 652 ATSLLDEMLQKGISPNISSFRLLIKAFCK 680



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 187/367 (50%), Gaps = 4/367 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    YN +++   +E  VD    L+  M    ++P+  T N LI GLC +  + +A+ +
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M  +G +P+  +F +++   C+ G    A  LLD M    V+PN   Y+TL+  FC 
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV---SKGI-KP 189
            G+   AE L   M   G   D V++N  I+  C   ++ EA  ++R+M      G+ +P
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRP 293

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            + T+N +  G  +   +E A  L E M+R+    +  +YN ++ GL +NG ++EA    
Sbjct: 294 NITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLAL 353

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + +     E +I ++N ++DGLCK+G +  A  +   +    +  D VTY+ ++HG C+ 
Sbjct: 354 KEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCST 413

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++ KA+++  +M     +PN      L+H   +  +  +  +LL KM E+    D    
Sbjct: 414 GKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTC 473

Query: 370 SMVVDLL 376
           ++V+D L
Sbjct: 474 NIVIDGL 480



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 176/356 (49%), Gaps = 6/356 (1%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGE--NINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           V+   +I  L K G  D A + F   + +     P V  YN ++      +  +    L+
Sbjct: 80  VSLIALIRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLY 139

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M+  GV P   T N+++  LC +G+ ++A  + D M  +  RPN F++  L+ G+C  
Sbjct: 140 KDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRA 199

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G   RA EL   M S G + + V YN LI+ +C+    EEA  L   M   G+ P VVT+
Sbjct: 200 GLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTF 259

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDD----VAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           N+    L    ++  A ++F +MQ D+       + +T+N  ++G CK G + EA  L  
Sbjct: 260 NSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVE 319

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
           ++      +++++YN  + GL ++G+L  A    + +  + +  ++ ++N ++ GLC +G
Sbjct: 320 SMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNG 379

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            +  A  +   M  + + P+ + + TL+HG     K  K   +LH+M  +   P+ 
Sbjct: 380 LISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNT 435



 Score =  160 bits (406), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 159/330 (48%), Gaps = 23/330 (6%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  ++NT++DGLCK G +  A+ +   M    I PD VTY++L+HG C      +A  
Sbjct: 362 EPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANN 421

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EMM +G  P+  T N+++  L K G++ EA +LL  M +R    +  T + ++DG C
Sbjct: 422 ILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLC 481

Query: 133 LTGKINRAEELFGSMESMG-----------------------CKHDDVSYNILINGYCKN 169
            +GK++ A E+   M   G                       C  D ++Y+I+ING CK 
Sbjct: 482 KSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKA 541

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
             ++EA   + EMV K + P  + Y+T      +  ++  A ++ ++M++        TY
Sbjct: 542 GRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTY 601

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           N+ I GL     I E   L   +       +I  YN +I  LC+ GR++ A  L   + +
Sbjct: 602 NSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQ 661

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           + +  ++ ++ ++I   C         ++F
Sbjct: 662 KGISPNISSFRLLIKAFCKASDFGVVKEVF 691



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 165/369 (44%), Gaps = 24/369 (6%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNT T N ++  L KEG + +A+ L  +M   + + D VT N +I GLC +   +EA 
Sbjct: 431 CSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAV 490

Query: 72  RLFFEMMDQGVQ-----------------------PSVVTFNVIMDELCKNGKMDEASRL 108
            +   M   G                         P ++T+++I++ LCK G++DEA + 
Sbjct: 491 EIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKK 550

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
              MV + + P++  Y T +  FC  GKI+ A  +   ME  GC     +YN LI G   
Sbjct: 551 FIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGS 610

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             ++ E   L  +M  KGI P + TYN +   L E  +++ A  L +EM +  ++ + S+
Sbjct: 611 KNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISS 670

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           +   I   CK        E+F  + +  C      Y+ + + L   G +  A ELF +  
Sbjct: 671 FRLLIKAFCKASDFGVVKEVFE-IALSICGHKEALYSLMFNELLIGGEVSEAKELFDAAL 729

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
            R        YN +I  LC D  ++ A D+   M +     +   F+ +I G  +  K  
Sbjct: 730 DRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKH 789

Query: 349 KVIELLHKM 357
              EL  +M
Sbjct: 790 DADELAERM 798



 Score =  120 bits (302), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 140/291 (48%), Gaps = 15/291 (5%)

Query: 4   GNGEIGVV--------CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYN 55
           GN  IG+V        C P+ +TY+ II+GLCK G +D+A+  F++M G++++PD + Y+
Sbjct: 508 GNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYD 567

Query: 56  SLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           + IH  C     + A R+  +M  +G   S+ T+N ++  L    ++ E   LLD M ++
Sbjct: 568 TFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEK 627

Query: 116 DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE---V 172
            + PN  TY+ ++   C  G+I  A  L   M   G   +  S+ +LI  +CK  +   V
Sbjct: 628 GITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVV 687

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           +E   +   +         + +N L +G     +V  A +LF+             YN  
Sbjct: 688 KEVFEIALSICGHKEALYSLMFNELLIG----GEVSEAKELFDAALDRCFDLGNFQYNDL 743

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL 283
           I+ LCK+  +  A ++   +       D  ++  +IDGL K G+   A EL
Sbjct: 744 IEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADEL 794



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 34/172 (19%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW------ 67
           PN  TYN +I  LC+ G +  A +L  +M  + I+P++ ++  LI   C A+D+      
Sbjct: 631 PNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEV 690

Query: 68  ----------------------------NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKN 99
                                       +EAK LF   +D+        +N ++++LCK+
Sbjct: 691 FEIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKD 750

Query: 100 GKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
             ++ AS +L  M+ +  R +  ++  ++DG    GK + A+EL   M  M 
Sbjct: 751 EMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMDMA 802


>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
 gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
          Length = 500

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 193/368 (52%), Gaps = 8/368 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEA 70
           C+P+   Y  +IDG CKE  +D+A  L  +M+ E  I PDVV YNS++ GLC +N + EA
Sbjct: 78  CQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEA 137

Query: 71  KRLFFE-MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
            +   E M+ QG  P+VVT+  ++   CK  KM  A  + + M++R ++P   +YS ++D
Sbjct: 138 WKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPTIVSYSVIID 197

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G    G++  A  +   ME++GC+ + V Y  LI+G CK+  +++A +LYR M   G  P
Sbjct: 198 GLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFP 257

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
              TY TL        + E AL LF+ + RD    D + Y   + GLC+   + +A  LF
Sbjct: 258 NQRTYATLIDTFCRNDRTETALGLFDHI-RDYCPLDVAMYTAVVSGLCRERRLDDARALF 316

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV-LVADVVTYNIMIHGLCN 308
           R + +     D  AYN L+ G  +SGR E A  +   L      VA+++TYN +I G C 
Sbjct: 317 REMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDPGCVANLLTYNTVIAGCC- 375

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
              ++    LF +M +  +AP+   +  LI   +   +  +  +L  +M    + P + +
Sbjct: 376 ---LESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAFDLCEEMLASGLSPPSGV 432

Query: 369 VSMVVDLL 376
           +  VV  L
Sbjct: 433 LGRVVARL 440



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 186/350 (53%), Gaps = 6/350 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFV-DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           PN   + ++ID L K   + D A+AL L M    I+PDVVT+ +LI G C       A  
Sbjct: 9   PNQHAFASLIDALSKSNRLGDAARALEL-MCDAGIHPDVVTFTALIRGFCKNRMVERAWE 67

Query: 73  LFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDVRPNAFTYSTLMDG 130
           +F EM+     QP    + V++D  CK  +MD A  LL ++ V+R ++P+   Y++++DG
Sbjct: 68  IFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDG 127

Query: 131 FCLTGKINRAEELFG-SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            C + +   A +    +M   GC    V+Y  LI G CK K+++ A++++  M+ + I+P
Sbjct: 128 LCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQP 187

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           T+V+Y+ +  GL +  +V  A ++  EM+      +   Y T IDGLCK+G++ +A  L+
Sbjct: 188 TIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALY 247

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           R +       + + Y  LID  C++ R E AL LF  + R     DV  Y  ++ GLC +
Sbjct: 248 RIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHI-RDYCPLDVAMYTAVVSGLCRE 306

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
            ++D A  LF +M    V+ +   +  L+HG  R  +  +   +L ++ +
Sbjct: 307 RRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGD 356



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 130/259 (50%), Gaps = 3/259 (1%)

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           PN   +++L+D    + ++  A      M   G   D V++  LI G+CKN+ VE A  +
Sbjct: 9   PNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEI 68

Query: 179 YREMV-SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD-VAADTSTYNTFIDGL 236
           ++EM+ S   +P    Y  L  G  +  +++ AL+L  EM+ +  +  D   YN+ +DGL
Sbjct: 69  FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGL 128

Query: 237 CKNGYIVEAVELF-RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           C++   +EA +    T+    C   +  Y  LI G CK+ ++++A+ ++ ++  R +   
Sbjct: 129 CRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPT 188

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           +V+Y+++I GL   G++  A+ +  +ME      NV+I+ TLI G  +         L  
Sbjct: 189 IVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYR 248

Query: 356 KMKEKKVMPDASIVSMVVD 374
            MK     P+    + ++D
Sbjct: 249 IMKRSGAFPNQRTYATLID 267



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 108/230 (46%), Gaps = 12/230 (5%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N V Y T+IDGLCK GF+D A AL+  MK     P+  TY +LI   C  ND  E  
Sbjct: 220 CELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCR-NDRTETA 278

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
              F+ +       V  +  ++  LC+  ++D+A  L   M    V  +   Y+ L+ G 
Sbjct: 279 LGLFDHIRDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGA 338

Query: 132 CLTGKINRAEELFGSMESMG----CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
             +G   R+EE F  +E +G    C  + ++YN +I G C    +E  + L+ EM  +GI
Sbjct: 339 FRSG---RSEEAFRILEELGDDPGCVANLLTYNTVIAGCC----LESGMVLFYEMRQRGI 391

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
            P   TY+ L   L    ++  A  L EEM    ++  +      +  LC
Sbjct: 392 APDFATYSALIDRLLGSGEIRRAFDLCEEMLASGLSPPSGVLGRVVARLC 441



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 4/105 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N +TYNT+I G C E        LF +M+   I PD  TY++LI  L  + +   A 
Sbjct: 360 CVANLLTYNTVIAGCCLE----SGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAF 415

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
            L  EM+  G+ P       ++  LC + + D A++L+++ +  D
Sbjct: 416 DLCEEMLASGLSPPSGVLGRVVARLCWSRRGDLAAKLIEMAMAVD 460


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 184/362 (50%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            K ++ TYN +I GL   G V K   L L+M+ E I P VVTYN++IHGL  +     A+ 
Sbjct: 1187 KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQV 1246

Query: 73   LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             F EM   G+ P V+T+N +++  CK G + EA  L   + +  + P   TY+ L+DG+C
Sbjct: 1247 KFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYC 1306

Query: 133  LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              G +  A  L   M   GC  +  +Y IL+ G    + +  A   + EM+SKG++P   
Sbjct: 1307 RLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCF 1366

Query: 193  TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
             YNT       +  +  A +L E +  + +++DT TYN  I GLCK G + +A EL   +
Sbjct: 1367 AYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKM 1426

Query: 253  GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 + D   Y CLI   C+ G L  A ++F ++    L+   VT+ ++IH  C  G +
Sbjct: 1427 VSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNL 1486

Query: 313  DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
              A+  F  M E  V PN I +  LIH   R+ +        H+M E+ ++ +    +++
Sbjct: 1487 YSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLL 1546

Query: 373  VD 374
            +D
Sbjct: 1547 ID 1548



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 175/363 (48%), Gaps = 35/363 (9%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P  VTYN +I GL + G V+ A+  F +M+   + PDV+TYNSL++G C A +  EA  L
Sbjct: 1223 PTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLL 1282

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            F ++   G+ P+V+T+N+++D  C+ G ++EA  L + M ++   PN  TY+ LM G   
Sbjct: 1283 FGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLN 1342

Query: 134  TGKINRAEELFGSMESMGCK-----------------------------------HDDVS 158
               +  A E F  M S G +                                    D V+
Sbjct: 1343 VRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVT 1402

Query: 159  YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
            YNILI+G CK   +++A  L  +MVS G++P  +TY  L     E   +  A K+F  M 
Sbjct: 1403 YNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMI 1462

Query: 219  RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
             D +     T+   I   C+ G +  A   FR +     E +   YN LI  LC+ GR +
Sbjct: 1463 SDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQ 1522

Query: 279  IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            +A   F  +  R LVA+  TY ++I G C  G  + A   + +M +N + P+ +    L+
Sbjct: 1523 LASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALL 1582

Query: 339  HGF 341
             GF
Sbjct: 1583 KGF 1585



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 181/368 (49%), Gaps = 1/368 (0%)

Query: 9    GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
            G  C PN VTYN +I GL ++G +++A  L   M+         TYN LI GL       
Sbjct: 1149 GSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-KASSFTYNPLITGLLARGCVK 1207

Query: 69   EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            +   L  EM ++G+ P+VVT+N ++  L ++G ++ A      M    + P+  TY++L+
Sbjct: 1208 KVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLL 1267

Query: 129  DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            +G+C  G +  A  LFG +   G     ++YNILI+GYC+  ++EEA  L  EM  +G  
Sbjct: 1268 NGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCL 1327

Query: 189  PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
            P V TY  L  G   +  +  A + F+EM    +  D   YNT I      G I  A EL
Sbjct: 1328 PNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFEL 1387

Query: 249  FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
               L +     D   YN LI GLCK+G L+ A EL   +    L  D +TY  +IH  C 
Sbjct: 1388 REVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCE 1447

Query: 309  DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
             G + +A  +F +M  + + P+ + F  +IH + R            KM E+ V P+   
Sbjct: 1448 RGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEIT 1507

Query: 369  VSMVVDLL 376
             ++++  L
Sbjct: 1508 YNVLIHAL 1515



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 157/319 (49%), Gaps = 3/319 (0%)

Query: 37   ALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
            + F +M    + PDV   N ++  L  A  W++   +  EM++ G++PS+VT+N ++D  
Sbjct: 1070 SAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSF 1129

Query: 97   CKNGKMDEASRLLDLMVQRDVR--PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
             K G+ D+ + LL  M  R     PN  TY+ ++ G    G +  A EL   M  +  K 
Sbjct: 1130 LKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSKKA 1188

Query: 155  DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
               +YN LI G      V++   L  EM ++GI PTVVTYN +  GL +   VE A   F
Sbjct: 1189 SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 1248

Query: 215  EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
             EM+   +  D  TYN+ ++G CK G + EA+ LF  L        +  YN LIDG C+ 
Sbjct: 1249 AEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRL 1308

Query: 275  GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            G LE A  L   +  +  + +V TY I++ G  N   +  A + F +M    + P+   +
Sbjct: 1309 GDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAY 1368

Query: 335  VTLIHGFVRINKPSKVIEL 353
             T I   + +   ++  EL
Sbjct: 1369 NTRICAELILGDIARAFEL 1387



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 185/397 (46%), Gaps = 38/397 (9%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P+    N ++  L      D   A+  +M    I P +VTYN+L+         ++   L
Sbjct: 1082 PDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAML 1141

Query: 74   FFEMMDQGVQ--PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
              EM  +G    P+ VT+NV++  L + G ++EA+ L++ M +   + ++FTY+ L+ G 
Sbjct: 1142 LKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKKASSFTYNPLITGL 1200

Query: 132  CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               G + +  +L   ME+ G     V+YN +I+G  ++  VE A   + EM + G+ P V
Sbjct: 1201 LARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDV 1260

Query: 192  VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +TYN+L  G  +   ++ AL LF +++R  +A    TYN  IDG C+ G + EA  L   
Sbjct: 1261 ITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEE 1320

Query: 252  LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL------P----------------- 288
            +G   C  ++  Y  L+ G      L +A E F  +      P                 
Sbjct: 1321 MGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGD 1380

Query: 289  -------RRVLV-----ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
                   R VL+     +D VTYNI+IHGLC  G +  A +L + M  N + P+ I +  
Sbjct: 1381 IARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTC 1440

Query: 337  LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            LIH         +  ++ + M    ++P A   ++++
Sbjct: 1441 LIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVII 1477



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 104/201 (51%), Gaps = 2/201 (0%)

Query: 15   NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
            +TVTYN +I GLCK G +  AK L ++M    + PD +TY  LIH  C      EA+++F
Sbjct: 1399 DTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIF 1458

Query: 75   FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
              M+  G+ PS VTF VI+   C+ G +  A      M++  V PN  TY+ L+   C  
Sbjct: 1459 NNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRM 1518

Query: 135  GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            G+   A   F  M   G   +  +Y +LI+G CK    E+A+  Y EM   GI P  +T+
Sbjct: 1519 GRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTH 1578

Query: 195  NTLFLGLFEIHQVEHALKLFE 215
              L  G F+ H V H ++  +
Sbjct: 1579 KALLKG-FDGH-VHHTIEYLD 1597



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 125/238 (52%), Gaps = 8/238 (3%)

Query: 13   KPNTVTYNTIIDGLCKEGFV-DKAKALFLQ--MKGENINPDVVTYNSLIHGLCHANDWNE 69
            +P+   YNT I   C E  + D A+A  L+  +  E I+ D VTYN LIHGLC   +  +
Sbjct: 1362 QPDCFAYNTRI---CAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKD 1418

Query: 70   AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
            AK L  +M+  G+QP  +T+  ++   C+ G + EA ++ + M+   + P+A T++ ++ 
Sbjct: 1419 AKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIH 1478

Query: 130  GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             +C  G +  A   F  M   G + ++++YN+LI+  C+    + A   + EM+ +G+  
Sbjct: 1479 AYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVA 1538

Query: 190  TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
               TY  L  G  ++   E A++ + EM ++ +  D  T+   + G   +G++   +E
Sbjct: 1539 NKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF--DGHVHHTIE 1594



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 3/192 (1%)

Query: 176  LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
            LS +REM S G+ P V   N +   L +  + +    + EEM    +     TYNT +D 
Sbjct: 1069 LSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDS 1128

Query: 236  LCKNGYIVEAVELFRTLGIL--KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
              K G   +   L + +      C  +   YN +I GL + G LE A EL   + R    
Sbjct: 1129 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKK 1187

Query: 294  ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            A   TYN +I GL   G + K +DL L+ME   + P V+ +  +IHG ++          
Sbjct: 1188 ASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 1247

Query: 354  LHKMKEKKVMPD 365
              +M+   ++PD
Sbjct: 1248 FAEMRAMGLLPD 1259


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/364 (33%), Positives = 194/364 (53%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT + ++DGLC++G   +A ALF +M    + P+ VTY +LI  L  A   +E+  L
Sbjct: 290 PDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGL 349

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+ +GV   +V +  +MD L K GK++EA  +L      ++ PN  TY+ L+D  C 
Sbjct: 350 LGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCR 409

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G I+ AE++   ME      + V+++ +ING  K   + +A    R+M   GI P VVT
Sbjct: 410 AGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVT 469

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G F+    E AL ++ +M  + V A+    ++ ++GL KNG I  A  LF+ + 
Sbjct: 470 YGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMD 529

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                LD   Y  L+DGL K+G +  A ++ + L  + L  D V YN+ I+ LC  G+  
Sbjct: 530 ERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFS 589

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD-ASIVSMV 372
           +A     +M    + P+   + T+I    R  K SK ++LL +MK   + P+  +  ++V
Sbjct: 590 EAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLV 649

Query: 373 VDLL 376
           V LL
Sbjct: 650 VGLL 653



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 183/360 (50%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V Y  ++D L KEG +++AK +    + +NI P+ VTY  L+   C A + + A+++  +
Sbjct: 363 VMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQ 422

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M ++ V P+VVTF+ I++ L K G + +A+  +  M    + PN  TY TL+DGF     
Sbjct: 423 MEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQG 482

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
              A +++  M   G + ++   + L+NG  KN  +E A +L+++M  +G+    V Y T
Sbjct: 483 QEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTT 542

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  GLF+   +  A K+ +E+   +++ D   YN FI+ LC  G   EA    + +    
Sbjct: 543 LMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTG 602

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            E D   YN +I   C+ G+   AL+L + + R  +  +++TY  ++ GL   G + KA 
Sbjct: 603 LEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAK 662

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            L  +M     AP  +    ++       +P  ++E+   M    +  D ++ + +V +L
Sbjct: 663 FLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVL 722



 Score =  173 bits (439), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 178/360 (49%), Gaps = 2/360 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           +IGV   PN VTY T+ID L K     ++  L  +M    +  D+V Y +L+  L     
Sbjct: 320 KIGVA--PNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGK 377

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             EAK +        + P+ VT+ V++D  C+ G +D A ++L  M ++ V PN  T+S+
Sbjct: 378 IEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSS 437

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           +++G    G + +A +    M+  G   + V+Y  LI+G+ K +  E AL +YR+M+ +G
Sbjct: 438 IINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEG 497

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           ++      ++L  GL +   +E A  LF++M    +  D   Y T +DGL K G +  A 
Sbjct: 498 VEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAF 557

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           ++ + L       D   YN  I+ LC  G+   A    + +    L  D  TYN MI   
Sbjct: 558 KVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAAR 617

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C +G+  KA  L  +M+ N++ PN+I + TL+ G +      K   LL++M      P +
Sbjct: 618 CREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTS 677



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 189/397 (47%), Gaps = 35/397 (8%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + V +N +IDG CK   +  A A+  +M  + +  DVV YNSL+ G  H+ D + A  + 
Sbjct: 186 DVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVV 245

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M   GV+P+VVT+  ++ E CK   MDEA  L + MV+  V P+  T S L+DG C  
Sbjct: 246 ERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRD 305

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-------- 186
           G+ + A  LF  M+ +G   + V+Y  LI+   K +   E+L L  EMVS+G        
Sbjct: 306 GQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMY 365

Query: 187 ---------------------------IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
                                      I P  VTY  L         ++ A ++  +M+ 
Sbjct: 366 TALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEE 425

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
             V  +  T+++ I+GL K G + +A +  R +       ++  Y  LIDG  K    E 
Sbjct: 426 KSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEA 485

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           AL+++R +    + A+    + +++GL  +G ++ A  LF DM+E  +  + + + TL+ 
Sbjct: 486 ALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMD 545

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           G  +        ++  ++ EK + PDA + ++ ++ L
Sbjct: 546 GLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCL 582



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 182/389 (46%), Gaps = 35/389 (8%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V Y T++DGL K G +  A  +  ++  +N++PD V YN  I+ LC    ++EAK    E
Sbjct: 538 VNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKE 597

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M + G++P   T+N ++   C+ GK  +A +LL  M +  ++PN  TY+TL+ G    G 
Sbjct: 598 MRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGV 657

Query: 137 INRAEELFGSMESMG--------------CK--------------------HDDVS-YNI 161
           + +A+ L   M S G              C                     H D++ YN 
Sbjct: 658 VKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNT 717

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L++  C +     A  +  EM+++GI P  +T+N L LG  +   +++A  ++ +M    
Sbjct: 718 LVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQG 777

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           ++ + +T+NT + GL   G I EA  +   +  +  E +   Y+ L+ G  K      AL
Sbjct: 778 LSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEAL 837

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            L+  +  +  +    TYN ++      G M++A +LF +M+   V      +  L++G+
Sbjct: 838 RLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGW 897

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVS 370
            ++    +V  LL  MKE    P    +S
Sbjct: 898 SKLRNGIEVRILLKDMKELGFKPSKGTIS 926



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 180/425 (42%), Gaps = 76/425 (17%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  ++D  C+ G +D A+ + LQM+ +++ P+VVT++S+I+GL       +A   
Sbjct: 395 PNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADY 454

Query: 74  FFEMMDQGVQPSVVTFNVIMD-----------------------------------ELCK 98
             +M D G+ P+VVT+  ++D                                    L K
Sbjct: 455 MRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRK 514

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG---------------------------- 130
           NG ++ A  L   M +R +  +   Y+TLMDG                            
Sbjct: 515 NGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVV 574

Query: 131 -------FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
                   C  GK + A+     M + G + D  +YN +I   C+  +  +AL L +EM 
Sbjct: 575 YNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMK 634

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI---DGLCKNG 240
              IKP ++TY TL +GL E   V+ A  L  EM     A  + T+   +    G  +  
Sbjct: 635 RNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPD 694

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            I+E  EL    G+     DI  YN L+  LC  G    A  +   +  R +  D +T+N
Sbjct: 695 VILEIHELMMGAGL---HADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFN 751

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +I G C    +D A  ++  M    ++PN+  F TL+ G     +  +   +L  MK+ 
Sbjct: 752 ALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKV 811

Query: 361 KVMPD 365
            + P+
Sbjct: 812 GLEPN 816



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 167/352 (47%), Gaps = 14/352 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TYNT+I   C+EG   KA  L  +MK  +I P+++TY +L+ GL  A    +AK 
Sbjct: 604 EPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKF 663

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM   G  P+ +T   ++     + + D    + +LM+   +  +   Y+TL+   C
Sbjct: 664 LLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLC 723

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G    A  +   M + G   D +++N LI G+CK+  ++ A ++Y +M+ +G+ P + 
Sbjct: 724 CHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIA 783

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL  GL    ++  A  +  +M++  +  +  TY+  + G  K    VEA+ L+   
Sbjct: 784 TFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLY--- 840

Query: 253 GILKCEL-------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
               CE+           YN L+    K+G +  A ELF  + RR ++    TY+I+++G
Sbjct: 841 ----CEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNG 896

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
                   +   L  DM+E    P+     ++   F R     +   LL  +
Sbjct: 897 WSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTL 948



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 181/401 (45%), Gaps = 41/401 (10%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALF----LQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +T+T N+II   C    +  A +L            +  D V+YN  +  L        A
Sbjct: 75  DTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGRLA 134

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ-RDVRP-NAFTYSTLM 128
             +  EM  +GV    VT +  +  LC+ G + EA+ L +++V+ R +   +   ++ L+
Sbjct: 135 PPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALI 194

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+C    +  A  +   M + G   D V YN L+ G+  + + + AL +   M + G++
Sbjct: 195 DGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVE 254

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTY  L     +   ++ A  L+E M R  V  D  T +  +DGLC++G   EA  L
Sbjct: 255 PNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYAL 314

Query: 249 FR-----------------------------TLGIL------KCELDIQAYNCLIDGLCK 273
           FR                             +LG+L         +D+  Y  L+D L K
Sbjct: 315 FREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGK 374

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
            G++E A ++ R      +  + VTY +++   C  G +D A  + L MEE +V PNV+ 
Sbjct: 375 EGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVT 434

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           F ++I+G V+     K  + + KMK+  + P+      ++D
Sbjct: 435 FSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLID 475



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 136/301 (45%), Gaps = 6/301 (1%)

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD----VRPNAFTYSTLMDGFCLTGKI 137
           V    +T N I+   C    +  A  LL           V  +  +Y+  +      G  
Sbjct: 72  VPGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHG 131

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV-SKGIKPT-VVTYN 195
             A  +   M   G   D V+ +  + G C+   V EA +L   +V  +GI    VV +N
Sbjct: 132 RLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWN 191

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
            L  G  ++  +  AL + E M    VA D   YN+ + G   +G    A+E+   +   
Sbjct: 192 ALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKAD 251

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
             E ++  Y  LI   CK   ++ A  L+  + R  ++ DVVT + ++ GLC DGQ  +A
Sbjct: 252 GVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEA 311

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
           + LF +M++  VAPN + + TLI    +  + S+ + LL +M  + V+ D  + + ++D 
Sbjct: 312 YALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDR 371

Query: 376 L 376
           L
Sbjct: 372 L 372



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 114/245 (46%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G     +   YNT++  LC  G    A  +  +M    I PD +T+N+LI G C ++  
Sbjct: 704 MGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHL 763

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           + A  ++ +M+ QG+ P++ TFN ++  L   G++ EA  +L  M +  + PN  TY  L
Sbjct: 764 DNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDIL 823

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G+        A  L+  M S G      +YN L++ + K   + +A  L+ EM  +G+
Sbjct: 824 VTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGV 883

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
             T  TY+ L  G  ++        L ++M+         T ++      + G   EA  
Sbjct: 884 LHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARR 943

Query: 248 LFRTL 252
           L +TL
Sbjct: 944 LLKTL 948


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 183/362 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K ++ TYN +I GL   G V K   L L+M+ E I P VVTYN++IHGL  +     A+ 
Sbjct: 272 KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQV 331

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EM   G+ P V+T+N +++  CK G + EA  L   + +  + P   TY+  +DG+C
Sbjct: 332 KFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYC 391

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  L   M   GC  +  +Y IL+ G      +  A   + EM+SKG++P   
Sbjct: 392 RLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCF 451

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YNT       +  +  AL+L E +  + +++DT TYN  I GLCK G + +A EL   +
Sbjct: 452 AYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKM 511

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D   Y CLI   C+ G L  A ++F ++    L+   VT+ ++IH  C  G +
Sbjct: 512 VSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNL 571

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A+  F  M E  V PN I +  LIH   R+ +        H+M E+ ++ +    +++
Sbjct: 572 YSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLL 631

Query: 373 VD 374
           +D
Sbjct: 632 ID 633



 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 176/363 (48%), Gaps = 35/363 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTYN +I GL + G V+ A+  F +M+   + PDV+TYNSL++G C A +  EA  L
Sbjct: 308 PTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLL 367

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG--- 130
           F ++   G+ P+V+T+N+ +D  C+ G ++EA  L + M ++   PN  TY+ LM G   
Sbjct: 368 FGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLN 427

Query: 131 -----------------------------FC---LTGKINRAEELFGSMESMGCKHDDVS 158
                                         C   + G I RA EL   +   G   D V+
Sbjct: 428 VCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVT 487

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YNILI+G CK   +++A  L  +MVS G++P  +TY  L     E   +  A K+F  M 
Sbjct: 488 YNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMI 547

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
            D +     T+   I   C+ G +  A   FR +     E +   YN LI  LC+ GR +
Sbjct: 548 SDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQ 607

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           +A   F  +  R LVA+  TY ++I G C  G  + A   + +M +N + P+ +    L+
Sbjct: 608 LASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALV 667

Query: 339 HGF 341
            GF
Sbjct: 668 KGF 670



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 155/317 (48%), Gaps = 3/317 (0%)

Query: 39  FLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
           F +M    + PDV   N ++  L  A  W++   +  EM+  G++PS+VT+N ++D   K
Sbjct: 157 FREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLK 216

Query: 99  NGKMDEASRLLDLMVQR--DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
            G+ D+ + LL  M  R     PN  TY+ ++ G    G +  A EL   M  +  K   
Sbjct: 217 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSKKASS 275

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            +YN LI G      V++   L  EM ++GI PTVVTYN +  GL +   VE A   F E
Sbjct: 276 FTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAE 335

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M+   +  D  TYN+ ++G CK G + EA+ LF  L        +  YN  IDG C+ G 
Sbjct: 336 MRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGD 395

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           LE A  L   +  +  + +V TY I++ G  N   +  A + F +M    + P+   + T
Sbjct: 396 LEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNT 455

Query: 337 LIHGFVRINKPSKVIEL 353
            I   + +   ++ +EL
Sbjct: 456 RICAELILGDIARALEL 472



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 186/397 (46%), Gaps = 38/397 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+    N ++  L      D   A+  +M    I P +VTYN+L+         ++   L
Sbjct: 167 PDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAML 226

Query: 74  FFEMMDQGVQ--PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             EM  +G    P+ VT+NV++  L + G ++EA+ L++ M +   + ++FTY+ L+ G 
Sbjct: 227 LKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKKASSFTYNPLITGL 285

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G + +  +L   ME+ G     V+YN +I+G  ++  VE A   + EM + G+ P V
Sbjct: 286 LARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDV 345

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYN+L  G  +   ++ AL LF +++R  +A    TYN  IDG C+ G + EA  L   
Sbjct: 346 ITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEE 405

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELF--------------------------- 284
           +G   C  ++  Y  L+ G      L +A E F                           
Sbjct: 406 MGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGD 465

Query: 285 --RSLP-RRVLV-----ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
             R+L  R VL+     +D VTYNI+IHGLC  G +  A +L + M  N + P+ I +  
Sbjct: 466 IARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTC 525

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           LIH         +  ++ + M    ++P A   ++++
Sbjct: 526 LIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVII 562



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 104/201 (51%), Gaps = 2/201 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +TVTYN +I GLCK G +  AK L ++M    + PD +TY  LIH  C      EA+++F
Sbjct: 484 DTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIF 543

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M+  G+ PS VTF VI+   C+ G +  A      M++  V PN  TY+ L+   C  
Sbjct: 544 NNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRM 603

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+   A   F  M   G   +  +Y +LI+G CK    E+A+  Y EM   GI P  +T+
Sbjct: 604 GRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTH 663

Query: 195 NTLFLGLFEIHQVEHALKLFE 215
             L  G F+ H V H ++  +
Sbjct: 664 KALVKG-FDGH-VHHTIEYLD 682



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 83/154 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ +TY  +I   C+ G + +A+ +F  M  + + P  VT+  +IH  C   +   A  
Sbjct: 517 QPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYG 576

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F +M+++GV+P+ +T+NV++  LC+ G+   AS     M++R +  N +TY+ L+DG C
Sbjct: 577 WFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNC 636

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
             G    A   +  M   G   D +++  L+ G+
Sbjct: 637 KVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF 670



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 3/192 (1%)

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
           LS +REM S G+ P V   N +   L +  + +    + EEM +  +     TYNT +D 
Sbjct: 154 LSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDS 213

Query: 236 LCKNGYIVEAVELFRTLGIL--KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
             K G   +   L + +      C  +   YN +I GL + G LE A EL   + R    
Sbjct: 214 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKK 272

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
           A   TYN +I GL   G + K +DL L+ME   + P V+ +  +IHG ++          
Sbjct: 273 ASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 332

Query: 354 LHKMKEKKVMPD 365
             +M+   ++PD
Sbjct: 333 FAEMRAMGLLPD 344


>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
 gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
          Length = 482

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 188/361 (52%), Gaps = 1/361 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           NTV+YN +I+  CK   +D+A  LF +MK     P   TYN+LI GLC      EA++ +
Sbjct: 100 NTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFY 159

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             ++  G   S +T+N+++D  CK  ++ EA  LL+ +V R     +  Y+ ++D     
Sbjct: 160 ERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKK 219

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GKI+ AE  F  ME  G +  +V++ +LI+G CK   V  A  ++   +  G  P+VV  
Sbjct: 220 GKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVIC 279

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + L  G  +   V+ A ++FE M       +  + N  I+GLCK   + +A E+F  +  
Sbjct: 280 SCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVK 339

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
            + + D+  Y+  +DGLC++ R++ A ++   L  +    DVV Y  +I GLC+ G++D+
Sbjct: 340 RQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDE 399

Query: 315 AHDLF-LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A  +F +DM     APN      L++GF    +  +  EL  +  E+ V PD    S + 
Sbjct: 400 ARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAMA 459

Query: 374 D 374
           +
Sbjct: 460 N 460



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 173/329 (52%), Gaps = 1/329 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+T TYNT+I GLC+   + +A+  + ++         +TYN L+ G C A+   EA 
Sbjct: 132 CAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPEAV 191

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  E++ +G   +   +N I+D L K GK+ EA    + M +  VRP   T++ L+DG 
Sbjct: 192 ELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGL 251

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++ RA+E+F S    G     V  + L++G+CK   V+EA  ++  M ++G  P  
Sbjct: 252 CKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPND 311

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+ N L  GL +  ++  A ++FEE+ +     D  TY+TF+DGLC+   + +A ++   
Sbjct: 312 VSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCM 371

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA-DVVTYNIMIHGLCNDG 310
           L       D+  Y  LI GLC  GRL+ A ++F    R    A +  T N++++G    G
Sbjct: 372 LVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAG 431

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           ++D+A +LF    E  V P+   F  + +
Sbjct: 432 RLDEARELFQRFVERGVQPDCRTFSAMAN 460



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 152/305 (49%), Gaps = 3/305 (0%)

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           LCH    +EA  LF  ++  G     +  ++++ EL K G+ +E  +++ LM+ R     
Sbjct: 9   LCHVGKLDEALELFHSLVSDGCG---LPADLLVRELSKAGRAEECLKVVKLMLDRQQLRE 65

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
               +  +D  C +  I++AE  F  ++      + VSYNILIN +CK K ++EA+ L+ 
Sbjct: 66  RHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFG 125

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           EM + G  P+  TYNTL  GL  + ++  A + +E +      A   TYN  +DG CK  
Sbjct: 126 EMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKAD 185

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            + EAVEL   L      +    YNC+ID L K G++  A   F  + +  +    VT+ 
Sbjct: 186 RVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFT 245

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           ++I GLC   ++ +A ++F    E+  +P+V+I   L+ GF +     +   +   M  +
Sbjct: 246 VLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNR 305

Query: 361 KVMPD 365
              P+
Sbjct: 306 GCTPN 310



 Score =  107 bits (267), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 94/160 (58%), Gaps = 1/160 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN V+ N +I+GLCK   + +A+ +F ++      PDVVTY++ + GLC A+  ++A+
Sbjct: 307 CTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQAR 366

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL-MVQRDVRPNAFTYSTLMDG 130
           ++   ++D+G  P VV +  ++  LC  G++DEA ++ ++ M      PN FT + L++G
Sbjct: 367 QVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNG 426

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
           F L G+++ A ELF      G + D  +++ + N   K +
Sbjct: 427 FGLAGRLDEARELFQRFVERGVQPDCRTFSAMANNTAKTE 466



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 102/210 (48%), Gaps = 3/210 (1%)

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           C   +++EAL L+  +VS G     +  + L   L +  + E  LK+ + M       + 
Sbjct: 10  CHVGKLDEALELFHSLVSDGCG---LPADLLVRELSKAGRAEECLKVVKLMLDRQQLRER 66

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
              N  ID LCK+  I +A   F+ L   +  ++  +YN LI+  CK+ R++ A++LF  
Sbjct: 67  HLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGE 126

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +          TYN +I GLC   ++ +A   +  +  +    + I +  L+ GF + ++
Sbjct: 127 MKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADR 186

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             + +ELL+++  +  +  ++  + ++D L
Sbjct: 187 VPEAVELLNELVARGGVVTSAPYNCIIDTL 216



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 36/127 (28%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH--------- 63
           KP+ VTY+T +DGLC+   VD+A+ +   +  +   PDVV Y +LI GLC          
Sbjct: 343 KPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARK 402

Query: 64  ---------------------------ANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
                                      A   +EA+ LF   +++GVQP   TF+ + +  
Sbjct: 403 VFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAMANNT 462

Query: 97  CKNGKMD 103
            K    D
Sbjct: 463 AKTEGWD 469



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 29/57 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           C PN  T N +++G    G +D+A+ LF +     + PD  T++++ +       W+
Sbjct: 413 CAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAMANNTAKTEGWD 469


>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 878

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 108/292 (36%), Positives = 171/292 (58%), Gaps = 3/292 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVD--KAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           PN VTYN +ID  C +G V+  K   +F  M    + PD +T+NSL+        W  A+
Sbjct: 258 PNLVTYNAVIDA-CGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAAR 316

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RLF  M+D+G+   + T+N ++D +CK G+MD A  ++  M  +++ PN  TYST++DG+
Sbjct: 317 RLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGY 376

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+++ A  +F  M+ +G   D VSYN L++ Y K    E+AL + +EM + GI+  V
Sbjct: 377 AKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDV 436

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN L  G  + ++ +   ++FEEM+R  V+ +  TY+T ID   K G   EA+E+FR 
Sbjct: 437 VTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFRE 496

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
                 + D+  Y+ LID LCK+G +E ++ L   + +  +  +VVTYN +I
Sbjct: 497 FKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSII 548



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 176/356 (49%), Gaps = 1/356 (0%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           + +I  L + G V+ AKA+F     E     V  +++LI     +   NEA ++F  M  
Sbjct: 194 SAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKS 253

Query: 80  QGVQPSVVTFNVIMDELCKNG-KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            G+ P++VT+N ++D   K G +  +   + D M+   V+P+  T+++L+      G   
Sbjct: 254 NGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWE 313

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A  LF +M   G   D  +YN L++  CK  +++ A  +  EM +K I P VVTY+T+ 
Sbjct: 314 AARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMI 373

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            G  ++ +++ AL +F EM+   V  D  +YNT +    K G   +A+++ + +      
Sbjct: 374 DGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIR 433

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            D+  YN L+ G  K  R +    +F  + R  +  +++TY+ +I      G   +A ++
Sbjct: 434 KDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEV 493

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           F + ++  +  +V+++  LI    +       + LL +M ++ + P+    + ++D
Sbjct: 494 FREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIID 549



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 181/372 (48%), Gaps = 11/372 (2%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKAL----FLQMKGENINPDVVTYNSLIHGLCHAND 66
           +C P+  T+  ++  L   G  D AKA+    F   +    N      +++I  L     
Sbjct: 150 LCGPDDYTF--LLRELGNRG--DSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGK 205

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
              AK +F   + +G   +V  F+ ++    ++G  +EA ++ D M    + PN  TY+ 
Sbjct: 206 VELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNA 265

Query: 127 LMDGFCLTGKI--NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           ++D  C  G +   +  E+F  M S G + D +++N L+    +    E A  L+  MV 
Sbjct: 266 VIDA-CGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVD 324

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           KGI   + TYNTL   + +  Q++ A ++  EM   ++  +  TY+T IDG  K G + +
Sbjct: 325 KGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDD 384

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A+ +F  +  L   LD  +YN L+    K GR E AL++ + +    +  DVVTYN ++ 
Sbjct: 385 ALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLA 444

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G     + D+   +F +M+   V+PN++ + TLI  + +     + +E+  + K+  +  
Sbjct: 445 GYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKA 504

Query: 365 DASIVSMVVDLL 376
           D  + S ++D L
Sbjct: 505 DVVLYSALIDAL 516



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 133/291 (45%), Gaps = 29/291 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + + VTYN ++ G  K+   D+ + +F +MK   ++P+++TY++LI        + EA  
Sbjct: 433 RKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAME 492

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F E    G++  VV ++ ++D LCKNG ++ +  LLD M +  +RPN  TY++++D F 
Sbjct: 493 VFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFG 552

Query: 133 LTGKIN------------RAEELFG-----SMESMGCKHDD-----VSYNILINGYCKNK 170
            +                + E L       ++ES     +D     +   +     C+ K
Sbjct: 553 RSASAQCVVDDSGETTALQVESLSSIVVQEAIESQAADKEDNRIIEIFGKLAAEKACEAK 612

Query: 171 -----EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
                E+   L ++++M    IKP VVT++ +          E A  L EE++  D    
Sbjct: 613 NSGKQEILCILGVFQKMHELKIKPNVVTFSAILNACSRCDSFEDASMLLEELRLFDNQVY 672

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
              +   + G  +N ++ +A  LF  + ++        YN L D L   G+
Sbjct: 673 GVAHGLLM-GYRENVWL-QAQSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 721


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 190/362 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +  T +T+I GLC  G    A A+  +M      PDVVTY  L+   C  + + +A +L 
Sbjct: 159 DAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLL 218

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM D+G  P +VT+NV+++ +C+ G++D+A   L  +      PN  +Y+ ++ G C  
Sbjct: 219 DEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTA 278

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            +   AEEL G M   GC  + V++N+LI+  C+   VE AL +  ++   G  P  ++Y
Sbjct: 279 ERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSY 338

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L     +  +++ A+   + M       D  +YNT +  LC++G +  AVEL   L  
Sbjct: 339 NPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKD 398

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C   + +YN +IDGL K+G+ + ALEL   +  + L  D++TY+ +  GLC + +++ 
Sbjct: 399 KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIED 458

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A   F  +++  + PN +++  +I G  +  +    I+L   M     MP+ S  +++++
Sbjct: 459 AIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIE 518

Query: 375 LL 376
            L
Sbjct: 519 GL 520



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/308 (33%), Positives = 169/308 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYN +++G+C+EG VD A      +      P+ V+YN ++ GLC A  W +A+
Sbjct: 226 CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 285

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM  +G  P+VVTFN+++  LC+ G ++ A  +L+ + +    PN+ +Y+ L+  F
Sbjct: 286 ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAF 345

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K+++A      M S GC  D VSYN L+   C++ EV+ A+ L  ++  KG  P +
Sbjct: 346 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 405

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++YNT+  GL +  + + AL+L  EM    +  D  TY+T   GLC+   I +A+  F  
Sbjct: 406 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 465

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +    +   YN +I GLCK      A++LF  +     + +  TY I+I GL  +G 
Sbjct: 466 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 525

Query: 312 MDKAHDLF 319
           + +A DL 
Sbjct: 526 IKEARDLL 533



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 173/331 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY  +++  CK     +A  L  +M+ +   PD+VTYN +++G+C     ++A 
Sbjct: 191 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAI 250

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                +   G +P+ V++N+++  LC   + ++A  L+  M Q+   PN  T++ L+   
Sbjct: 251 EFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFL 310

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A E+   +   GC  + +SYN L++ +CK K++++A++    MVS+G  P +
Sbjct: 311 CRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDI 370

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+YNTL   L    +V+ A++L  +++    A    +YNT IDGL K G   EA+EL   
Sbjct: 371 VSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNE 430

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DI  Y+ +  GLC+  R+E A+  F  +    +  + V YN +I GLC   +
Sbjct: 431 MVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE 490

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
              A DLF  M  N   PN   +  LI G  
Sbjct: 491 THSAIDLFAYMIGNGCMPNESTYTILIEGLA 521



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 187/364 (51%), Gaps = 3/364 (0%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
             C P+ + YN ++ G C  G VD A+    +   E    D  T ++LI GLC       
Sbjct: 122 AACGPDVMAYNAMMAGYCGAGQVDAARRWCAERAVER---DAYTCDTLIRGLCGRGRTAN 178

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +  EM+ +   P VVT+ ++++  CK     +A +LLD M  +   P+  TY+ +++
Sbjct: 179 ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 238

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C  G+++ A E   ++ S GC+ + VSYNI++ G C  +  E+A  L  EM  KG  P
Sbjct: 239 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 298

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VVT+N L   L     VE AL++ E++ +   + ++ +YN  +   CK   + +A+   
Sbjct: 299 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFL 358

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +    C  DI +YN L+  LC+SG +++A+EL   L  +     +++YN +I GL   
Sbjct: 359 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 418

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G+  +A +L  +M    + P++I + T+  G  R ++    I    K+++  + P+  + 
Sbjct: 419 GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLY 478

Query: 370 SMVV 373
           + ++
Sbjct: 479 NAII 482



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 171/352 (48%), Gaps = 14/352 (3%)

Query: 26  LCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPS 85
           L + G +D+A    L++ G    PD  T  +LI  L  +    EA+R+          P 
Sbjct: 77  LVRRGELDEA----LRLVGSARRPDAGTCAALIKKLSASGRTAEARRVL-----AACGPD 127

Query: 86  VVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFG 145
           V+ +N +M   C  G++D A R      +R V  +A+T  TL+ G C  G+   A  +  
Sbjct: 128 VMAYNAMMAGYCGAGQVDAARRWC---AERAVERDAYTCDTLIRGLCGRGRTANALAVLD 184

Query: 146 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 205
            M    C  D V+Y IL+   CK    ++A+ L  EM  KG  P +VTYN +  G+ +  
Sbjct: 185 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 244

Query: 206 QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYN 265
           +V+ A++  + +       +T +YN  + GLC      +A EL   +G   C  ++  +N
Sbjct: 245 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 304

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD-MEE 324
            LI  LC+ G +E ALE+   +P+     + ++YN ++H  C   +MDKA   FLD M  
Sbjct: 305 MLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAM-AFLDLMVS 363

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               P+++ + TL+    R  +    +ELLH++K+K   P     + V+D L
Sbjct: 364 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 415


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 198/369 (53%), Gaps = 2/369 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E GV  KP  VTY++++   C  G +D+A  L+ +M G+   P+VVTY +L+ G  +   
Sbjct: 414 ETGV--KPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAA 471

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           +++A  L  EM   GV  +  T+N +++ LC  G++ E   +L         P A TY++
Sbjct: 472 FDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNS 531

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           +++GF   G +  A  ++  M + G   + V+Y   I+GYCK    + AL +  ++  KG
Sbjct: 532 IINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKG 591

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           ++P +  YN+L  G  +   + HAL++   M +D +  + S YN+FI G      + EA+
Sbjct: 592 LRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEAL 651

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            L+  +     +LD   Y  LIDG  K G +  AL+L+  +  +  + D +T+  + HGL
Sbjct: 652 RLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGL 711

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C +G +D A  L  +M    + PNV+++  LI+G++R  K  +   L  +M E+K+MPD 
Sbjct: 712 CRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDD 771

Query: 367 SIVSMVVDL 375
           +   ++V +
Sbjct: 772 TTYDILVGM 780



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 176/352 (50%), Gaps = 1/352 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T  +N +I GL  +     A +LF +M    I PD  TYN LIH LC      EA  L
Sbjct: 350 PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNL 408

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +M + GV+P +VT++ ++   C NG MDEA +L   M  +   PN  TY+TLM G   
Sbjct: 409 WEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
               ++A  L   M+  G   +D +YN LING C    V E   + +   ++G  PT +T
Sbjct: 469 KAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMT 528

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN++  G  +   +  A  ++++M    +  +  TY +FIDG CK      A+++   + 
Sbjct: 529 YNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVR 588

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 DI AYN LI G C+ G +  AL++   + +  L+ ++  YN  I G  N   M+
Sbjct: 589 CKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMME 648

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A  L+  M +  +  +   + TLI GF +    +  ++L  +M  K  +PD
Sbjct: 649 EALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPD 700



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 181/361 (50%), Gaps = 1/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTY  +I G  +EG  +KA  L  QM+   + P    +N +I GL +   W +A  L
Sbjct: 315 PTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSL 374

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM D G+ P   T+N+++  LC+  K+ EA  L + M +  V+P   TY +L+  +C+
Sbjct: 375 FKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCV 433

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A +L+  M   G   + V+Y  L+ G+      ++A +L  EM   G+     T
Sbjct: 434 NGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYT 493

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL  + +V    ++ +  + +       TYN+ I+G  K G +  A  +++ + 
Sbjct: 494 YNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMC 553

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +I  Y   IDG CK+   ++AL++   +  + L  D+  YN +I G C +G M 
Sbjct: 554 AKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMS 613

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  + + M ++ + PN+ ++ + I G+  +    + + L  KM ++ +  D +  + ++
Sbjct: 614 HALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLI 673

Query: 374 D 374
           D
Sbjct: 674 D 674



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 178/356 (50%), Gaps = 1/356 (0%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           ++ ++    KEG  D A  LF +M    I PD    +  I  LC   D N A  +  +M 
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQ 239

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           D G  P   TFN ++D L K G+M+EA  + D ++    + +    +TLM G+CL  ++ 
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
           +A ++F      G    DV+Y +LI G  +    E+A  L R+M   G+ P+   +N + 
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVI 359

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            GL      + A+ LF+EM  D    D  TYN  I  LC+   I EA+ L+  +     +
Sbjct: 360 KGLLNDKLWKDAVSLFKEMA-DSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVK 418

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
             I  Y+ L+   C +G ++ A++L+  +P +    +VVTY  ++ G  N    DKA+ L
Sbjct: 419 PYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYAL 478

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +M++N V+ N   + TLI+G   + +  +V E+L + + +  +P A   + +++
Sbjct: 479 LAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIIN 534



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 176/359 (49%), Gaps = 7/359 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V   T++ G C +  V KA  +F +   + + P  VTY  LI G        +A  
Sbjct: 279 KMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYE 338

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M D G+ PS   FN+++  L  +    +A  L   M    + P+AFTY+ L+   C
Sbjct: 339 LCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLC 397

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              KI  A  L+  M   G K   V+Y+ L+  YC N  ++EA+ LY EM  KG  P VV
Sbjct: 398 QRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVV 457

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL---F 249
           TY TL  G       + A  L  EM+++ V+ +  TYNT I+GLC  G + E  E+   F
Sbjct: 458 TYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRF 517

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
            T G +   +    YN +I+G  K+G +  A  +++ +  + +  ++VTY   I G C  
Sbjct: 518 ETEGFVPTAM---TYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKT 574

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
              D A  +  D+    + P++  + +LI GF +    S  +++L  M +  ++P+ S+
Sbjct: 575 SCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISV 633



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 150/356 (42%), Gaps = 34/356 (9%)

Query: 41  QMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
            M+   + PD  +   L+     +    +A  L  EM  +G       F+V+M    K G
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEG 191

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
             D+A RL D M   ++ P+    S  +   C     NRA  +   M+  G    D ++N
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            +++   K   +EEAL +  E+++ G K +VV   TL  G     +V  AL +FEE  RD
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTL-----------------GILKCEL---- 259
            +     TY   I G  + G   +A EL R +                 G+L  +L    
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 260 -------------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
                        D   YN LI  LC+  ++  AL L+  +    +   +VTY+ ++   
Sbjct: 372 VSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCY 431

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           C +G MD+A  L+ +M      PNV+ + TL+ G +      K   LL +MK+  V
Sbjct: 432 CVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGV 487



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 115/265 (43%), Gaps = 1/265 (0%)

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           M  R V P+A + + L+     +     A  L   M   G   D   +++++    K   
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
            ++A+ L+ EM +  I+P     +     L ++     AL +  +MQ         T+N+
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            +D L K G + EA+ +   L     ++ +     L+ G C    +  AL++F    R  
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           LV   VTY ++I G   +G  +KA++L   M ++ + P+   F  +I G +        +
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 352 ELLHKMKEKKVMPDASIVSMVVDLL 376
            L  +M +  + PDA   ++++  L
Sbjct: 373 SLFKEMADSGI-PDAFTYNILIHWL 396


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 190/341 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+I+    +G V KA+ ++ QM  + I+P+VVTY ++I  LC      +A+RL
Sbjct: 184 PSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERL 243

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M + G+QP+  T+NV+M   C+   ++ A  L   +++  + PNA  ++TL+DGFC 
Sbjct: 244 FDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCK 303

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             + + A+ +F  M   G       YN L++G  ++   +EAL+LY+EM   G+ P   T
Sbjct: 304 AKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFT 363

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            + +  GL +  Q+  A +  + +Q D V  + + YN  ID  C+ G + EA+     + 
Sbjct: 364 CSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMT 423

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  E ++ +Y+ LIDG  K G+++IA+ ++  +  + +  +VVTY  +IHG   +G +D
Sbjct: 424 EVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGID 483

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
            A  L  +M EN ++PN I    L+ G  R N+  + +  +
Sbjct: 484 AAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFV 524



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 183/363 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P     N ++DGL K      A  LF +M    + P VVTYN+LI+         +A+ +
Sbjct: 149 PALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEV 208

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +M+ Q + P+VVT+  ++  LC+ G + +A RL D M +  ++PN +TY+ LM G C 
Sbjct: 209 WDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQ 268

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +N A  L+  +   G   + V +  LI+G+CK K   EA  ++ EM   G+ PTV  
Sbjct: 269 RDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPV 328

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L  G F     + AL L++EM R  +  D  T +  + GLC  G +  A    + + 
Sbjct: 329 YNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQ 388

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                L+  AYN LID  C+ G LE AL     +    +  +VV+Y+ +I G    G+M 
Sbjct: 389 EDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQ 448

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  ++ +M    + PNV+ +  LIHG  +         L  +M E  + P+A  VS++V
Sbjct: 449 IAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLV 508

Query: 374 DLL 376
           D L
Sbjct: 509 DGL 511



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 169/335 (50%), Gaps = 19/335 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V + T+IDG CK     +AK +FL+M    + P V  YNSL+ G   + +  EA  L
Sbjct: 289 PNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALAL 348

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + EM   G+ P   T ++++  LC  G+M  A R L  + +  V  NA  Y+ L+D +C 
Sbjct: 349 YQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCR 408

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A      M  +G + + VSY+ LI+G+ K  +++ A+++Y EMV+KGI+P VVT
Sbjct: 409 IGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVT 468

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G  +   ++ A +L +EM  + ++ +  T +  +DGLC+   + EAV       
Sbjct: 469 YTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYS 528

Query: 254 ILKCELDIQA------------------YNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
            LKC  DI +                  Y  LI GL   G+   A +LF  + +  ++ D
Sbjct: 529 GLKCS-DIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPD 587

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
             TY ++I G C  G +  A  L+ DM +  V P 
Sbjct: 588 SFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPT 622



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 175/348 (50%), Gaps = 23/348 (6%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TYN ++ G C+   V+ A  L+ ++    +NP+ V + +LI G C A  ++EAK 
Sbjct: 253 QPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKG 312

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM   GV P+V  +N +MD   ++G   EA  L   M +  + P+ FT S ++ G C
Sbjct: 313 MFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLC 372

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ A+     ++  G   +  +YN LI+ YC+   +EEAL+    M   GI+P VV
Sbjct: 373 DGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVV 432

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y++L  G  +  +++ A+ ++ EM    +  +  TY   I G  KNG I  A  L + +
Sbjct: 433 SYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEM 492

Query: 253 ---GILKCELDIQAYNCLIDGLCKSGRLEIALELFR-----------------SLPRRVL 292
              GI    + +   + L+DGLC+  R++ A+                     ++    L
Sbjct: 493 IENGISPNAITV---SVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECL 549

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           + + V Y  +I+GL  DGQ  +A  LF  M ++ + P+   +  LI G
Sbjct: 550 IPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRG 597



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 109/201 (54%), Gaps = 19/201 (9%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+G+  +PN V+Y+++IDG  K G +  A A++ +M  + I P+VVTY +LIHG      
Sbjct: 424 EVGI--EPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGG 481

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL----------------D 110
            + A RL  EM++ G+ P+ +T +V++D LC+  ++ EA R +                +
Sbjct: 482 IDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSN 541

Query: 111 LMVQRD-VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
             ++ + + PN+  Y TL+ G  L G+   A +LF  M   G   D  +Y +LI G C  
Sbjct: 542 FTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCML 601

Query: 170 KEVEEALSLYREMVSKGIKPT 190
             V  A+ LY +M+  G+KPT
Sbjct: 602 GYVLNAMMLYADMMKIGVKPT 622



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 17/127 (13%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKG-----------------ENINPDVVTYN 55
            PN +T + ++DGLC+E  V +A    ++  G                 E + P+ V Y 
Sbjct: 498 SPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYM 557

Query: 56  SLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           +LI+GL       EA +LF  M   G+ P   T+ +++   C  G +  A  L   M++ 
Sbjct: 558 TLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKI 617

Query: 116 DVRPNAF 122
            V+P  +
Sbjct: 618 GVKPTRY 624


>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 196/361 (54%), Gaps = 2/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   +NT ++ LC++  ++ A  LF  M  +  +PDVV+Y  +I  LC+A  ++EA ++
Sbjct: 117 PDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKV 176

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           +  ++D+G+ P       ++  LC  G++D A  L+  +++  V+ N+  Y+ L+DGFC 
Sbjct: 177 WRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCR 236

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++++A ++   M   GC  D V+YNIL+N  C+   V+EA+ L   M   G++P + +
Sbjct: 237 MGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYS 296

Query: 194 YNTLFLGLFEIHQVEHA-LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           YN L  G  + + V+ A L + E MQ   +  D  +YNT I   CK     +  ELF  +
Sbjct: 297 YNELLKGFCKANMVDRAHLMMVERMQTKGM-CDVVSYNTVITAFCKARRTRKGYELFEEM 355

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D+  +N LID   + G   +  +L   + +  ++ D + Y  ++  LC +G++
Sbjct: 356 CGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKV 415

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D AH +F DM EN V P+VI +  L++GF + ++    + L  +M+ K + PD     ++
Sbjct: 416 DVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLI 475

Query: 373 V 373
           V
Sbjct: 476 V 476



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 167/329 (50%), Gaps = 4/329 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+      ++ GLC  G VD A  L + +    +  + + YN+LI G C     ++A ++
Sbjct: 187 PDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKI 246

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   G  P +VT+N++++  C+ G +DEA RL++ M +  V P+ ++Y+ L+ GFC 
Sbjct: 247 KAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCK 306

Query: 134 TGKINRAEELFGSMESMGCKH--DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              ++RA  +   +E M  K   D VSYN +I  +CK +   +   L+ EM  KGI+P +
Sbjct: 307 ANMVDRAHLMM--VERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDM 364

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+N L              KL +EM +  V  D   Y   +D LCKNG +  A  +FR 
Sbjct: 365 VTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRD 424

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D+ +YN L++G CK+ R+  A+ LF  +  + L  D VTY +++ GL    +
Sbjct: 425 MVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKK 484

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           +  A  ++  M E     N  +  TL++ 
Sbjct: 485 ISLACRVWDQMMERGFTLNRHLSETLVNA 513



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 174/371 (46%), Gaps = 8/371 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM---KGENINPDVVTYNSLIHGLCHA-NDW 67
           C+  +V YN  I  L +   +  A   + +    +G ++ P   TY+  I  LC A N+ 
Sbjct: 41  CRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRGFSLLP--FTYSRFISALCSAPNNI 98

Query: 68  NEA--KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
           N      L  +M   G  P +  FN  ++ LC+  +++ A  L   M  +   P+  +Y+
Sbjct: 99  NLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYT 158

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            ++D  C   + + A +++  +   G   D  +   L+ G C    V+ A  L   ++  
Sbjct: 159 IIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKG 218

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G+K   + YN L  G   + +V+ A+K+   M R     D  TYN  ++  C+ G + EA
Sbjct: 219 GVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEA 278

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           V L  T+     E D+ +YN L+ G CK+  ++ A  +     +   + DVV+YN +I  
Sbjct: 279 VRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITA 338

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            C   +  K ++LF +M    + P+++ F  LI  F+R      V +LL +M + +V+PD
Sbjct: 339 FCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPD 398

Query: 366 ASIVSMVVDLL 376
               + VVD L
Sbjct: 399 CIFYTAVVDHL 409



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 125/238 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYN +++  C+EG VD+A  L   M+   + PD+ +YN L+ G C AN  + A 
Sbjct: 255 CVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAH 314

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  E M       VV++N ++   CK  +  +   L + M  + +RP+  T++ L+D F
Sbjct: 315 LMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAF 374

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G  +  ++L   M  M    D + Y  +++  CKN +V+ A S++R+MV  G+ P V
Sbjct: 375 LREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDV 434

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           ++YN L  G  +  +V  A+ LF+EMQ   +  D  TY   + GL +   I  A  ++
Sbjct: 435 ISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVW 492



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 174/364 (47%), Gaps = 4/364 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + + Y + I  L K G +++A  LF QM   N     V YN  I  L   +  + A   +
Sbjct: 9   HRLAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYY 68

Query: 75  FE-MMDQGVQPSVVTFNVIMDELCK---NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
              ++ +G      T++  +  LC    N  +     LL  M      P+ + ++T ++ 
Sbjct: 69  RRHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNL 128

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C   ++  A ELF SM S G   D VSY I+I+  C  K  +EA  ++R ++ KG+ P 
Sbjct: 129 LCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPD 188

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
                 L +GL    +V+ A +L   + +  V  ++  YN  IDG C+ G + +A+++  
Sbjct: 189 YKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKA 248

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C  D+  YN L++  C+ G ++ A+ L  ++ R  +  D+ +YN ++ G C   
Sbjct: 249 FMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKAN 308

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            +D+AH + ++  +     +V+ + T+I  F +  +  K  EL  +M  K + PD    +
Sbjct: 309 MVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFN 368

Query: 371 MVVD 374
           +++D
Sbjct: 369 ILID 372



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 119/224 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  +YN ++ G CK   VD+A  + ++        DVV+YN++I   C A    +   
Sbjct: 291 EPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYE 350

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  +G++P +VTFN+++D   + G      +LLD M +  V P+   Y+ ++D  C
Sbjct: 351 LFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLC 410

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK++ A  +F  M   G   D +SYN L+NG+CK   V +A+ L+ EM SKG+ P  V
Sbjct: 411 KNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEV 470

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           TY  +  GL    ++  A +++++M       +     T ++ +
Sbjct: 471 TYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNAI 514



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 8/260 (3%)

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           M Q  +  +   Y + +      G IN+A  LF  M    C+   V YN  I    ++  
Sbjct: 1   MYQSSIGAHRLAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSR 60

Query: 172 VEEALSLYRE-MVSKGIKPTVVTYNTLFLGLFEIHQ-----VEHALKLFEEMQRDDVAAD 225
           +  A   YR  ++ +G      TY+     L          + H+L L  +M       D
Sbjct: 61  LHLAHHYYRRHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLL--DMDSLGFVPD 118

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
              +NT+++ LC+   +  A+ELF ++     + D+ +Y  +ID LC + R + A +++R
Sbjct: 119 IWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWR 178

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            L  + L  D      ++ GLC+ G++D A++L + + +  V  N +++  LI GF R+ 
Sbjct: 179 RLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMG 238

Query: 346 KPSKVIELLHKMKEKKVMPD 365
           +  K +++   M     +PD
Sbjct: 239 RVDKAMKIKAFMSRTGCVPD 258


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 196/364 (53%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +C   +  ++ +     + G +++A   F +M+     P   + N L+H L  + +    
Sbjct: 155 ICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLV 214

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           ++ F +M+  G+ PSV T+NV++D LCK G ++ + RL   M +  + P+  TY++L+DG
Sbjct: 215 RKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDG 274

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G +     LF  M+ +GC  D ++YN LIN YCK +++  A   + EM + G+KP 
Sbjct: 275 YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPN 334

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY+TL     +   ++ A+KL  +M+R  +  +  TY + ID  CK G + EA +L  
Sbjct: 335 VVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 394

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +     +L+I  Y  L+DGLCK+GR+  A E+FRS+ +  +  +   Y  ++HG     
Sbjct: 395 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE 454

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +M+ A  +   M E  + P++I++ ++I G     K  +   +L +MK + +  +  I +
Sbjct: 455 RMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIST 514

Query: 371 MVVD 374
            ++D
Sbjct: 515 TIID 518



 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 185/353 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTY+T+ID  CKEG +  A  L   M+   + P+  TY SLI   C A +  EA +
Sbjct: 332 KPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWK 391

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+  GV+ ++VT+  ++D LCK G+M EA  +   M++  + PN   Y+ L+ G+ 
Sbjct: 392 LLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYI 451

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++  A ++   M     K D + Y  +I G+C  +++EE   +  EM S+GI    V
Sbjct: 452 KAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPV 511

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
              T+    F+  +   AL  F+EMQ   V A   TY   IDGLC+ G +  AV+ F  +
Sbjct: 512 ISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRM 571

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             L  + ++  Y  LIDGLC +  +E A +LF  +  R +  D+  +  +I G    G +
Sbjct: 572 LSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNL 631

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +A  L   M E A+  ++ ++ +L+ GF +  +  +  +  ++M EK ++P+
Sbjct: 632 QEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPE 684



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 193/365 (52%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           V C P+ +TYN +I+  CK   + +A   F +MK   + P+VVTY++LI   C       
Sbjct: 294 VGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQG 353

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A +L  +M   G+ P+  T+  ++D  CK G + EA +LL+ M+Q  V+ N  TY+ L+D
Sbjct: 354 AIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLD 413

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C  G++  AEE+F SM   G   +   Y  L++GY K + +E+A+ + ++M    IKP
Sbjct: 414 GLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKP 473

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            ++ Y ++  G     ++E    + EEM+   ++A+     T ID   K G   +A+  F
Sbjct: 474 DLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFF 533

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + +  +  E  I  Y  LIDGLC++G +E+A++ F  +    L  +V  Y  +I GLC +
Sbjct: 534 QEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXN 593

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
             ++ A  LF +M+   + P++  F  LI G ++     + + L+ +M E  +  D  + 
Sbjct: 594 NCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVY 653

Query: 370 SMVVD 374
           + +V 
Sbjct: 654 TSLVS 658



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 185/361 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYN++IDG  K G +++  +LF +MK     PD++TYN LI+  C       A   
Sbjct: 263 PDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEY 322

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM + G++P+VVT++ ++D  CK G M  A +LL  M +  + PN FTY++L+D  C 
Sbjct: 323 FSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCK 382

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A +L   M   G K + V+Y  L++G CK   + EA  ++R M+  GI P    
Sbjct: 383 AGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQV 442

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G  +  ++E A+K+ ++M   ++  D   Y + I G C    + E   +   + 
Sbjct: 443 YTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMK 502

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +      +ID   K+G+   AL  F+ +    + A +VTY ++I GLC  G ++
Sbjct: 503 SRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVE 562

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A D F  M    + PNV ++ +LI G    N      +L  +M+ + + PD +  + ++
Sbjct: 563 LAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALI 622

Query: 374 D 374
           D
Sbjct: 623 D 623



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 165/316 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N VTY  ++DGLCK G + +A+ +F  M  + I+P+   Y +L+HG   A    +A +
Sbjct: 402 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMK 461

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M +  ++P ++ +  I+   C   K++E   +L+ M  R +  N    +T++D + 
Sbjct: 462 ILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYF 521

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK + A   F  M+ +G +   V+Y +LI+G C+   VE A+  +  M+S G++P V 
Sbjct: 522 KAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVA 581

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y +L  GL   + +E A KLF+EMQ   +  D + +   IDG  K+G + EA+ L   +
Sbjct: 582 VYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRM 641

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             L  E D+  Y  L+ G  + G L  A + F  +  + ++ + V    ++      GQ+
Sbjct: 642 TELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQL 701

Query: 313 DKAHDLFLDMEENAVA 328
           D+A +L  +ME  A +
Sbjct: 702 DEAIELKNEMERMAYS 717



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 74/147 (50%)

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
           R+   + +  ++       + G + EA E F  +   +     ++ N L+  L KSG  +
Sbjct: 153 RNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQ 212

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           +  + F  +    +   V TYN+MI  LC +G ++ +  LF+ M E  ++P+V+ + +LI
Sbjct: 213 LVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLI 272

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPD 365
            G+ ++    +V  L ++MK+   +PD
Sbjct: 273 DGYGKVGSLEEVASLFNEMKDVGCVPD 299


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 188/365 (51%), Gaps = 1/365 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENI-NPDVVTYNSLIHGLCHANDWNEAK 71
           +P+  TYN +  GLC+ G VD+A  L  +M+  +I +PDVVTYN+L+         ++A 
Sbjct: 312 EPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDAL 371

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM D+GV+ S+VT N+++  LC+ G+++EA   L +M +  + P+  TY+TL+D +
Sbjct: 372 NLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAY 431

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    + +A  L   M   G K D  + N L+   CK K  EEA  L R    +G  P  
Sbjct: 432 CKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDE 491

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+Y T+    F+ ++ E AL L++EM +  +     TYNT I GLC  G + EA++    
Sbjct: 492 VSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNE 551

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L       D   YN +I   CK G LE A +    +       DVVT N +++GLC  G+
Sbjct: 552 LMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGK 611

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           ++KA  LF    E     +VI + TLI    +       +     M+ + + PDA   ++
Sbjct: 612 LEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNV 671

Query: 372 VVDLL 376
           V+  L
Sbjct: 672 VLSAL 676



 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 179/349 (51%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +  P+ VTYNT++D   K      A  L  +M+ + +   +VT+N ++ GLC      EA
Sbjct: 346 IVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEA 405

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
                 M ++G+ P V+T+N ++D  CK   + +A  L+D MV+  ++ + FT +TL+  
Sbjct: 406 LGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYN 465

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C   +   AEEL  S    G   D+VSY  ++  Y K  + E AL L+ EM  + + P+
Sbjct: 466 LCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPS 525

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           + TYNTL  GL  I ++  A+    E+ +  +  D +TYN  I   CK G + +A +   
Sbjct: 526 IYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHN 585

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +     + D+   N L++GLC  G+LE A++LF S   +    DV+TYN +I  LC DG
Sbjct: 586 KMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDG 645

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
            +D A   F DME   + P+   +  ++       +  +   +LHK+ E
Sbjct: 646 DVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDE 694



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 194/367 (52%), Gaps = 1/367 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           I +   PN  T+N ++   C +G +  A +    M+G  ++PDVVTYN+L+   C     
Sbjct: 202 IALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGML 261

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA+ L   M  +G+ P+  T+N ++    + G + +A+ +++ M      P+ +TY+ L
Sbjct: 262 GEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVL 321

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDD-VSYNILINGYCKNKEVEEALSLYREMVSKG 186
             G C  GK++ A +L   ME +     D V+YN L++   K +   +AL+L  EM  KG
Sbjct: 322 AAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKG 381

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +K ++VT+N +  GL    Q+E AL   + M  + +A D  TYNT ID  CK   + +A 
Sbjct: 382 VKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAF 441

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            L   +     ++D    N L+  LCK  R E A EL RS P+R  V D V+Y  ++   
Sbjct: 442 VLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAY 501

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             + + + A  L+ +M +  + P++  + TLI G   I K ++ I+ L+++ +K ++PD 
Sbjct: 502 FKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDD 561

Query: 367 SIVSMVV 373
           +  ++++
Sbjct: 562 TTYNIII 568



 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 182/388 (46%), Gaps = 36/388 (9%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G    P+ VTYNT++   C++G + +A+ L  +MK E I P   TYN+L+          
Sbjct: 238 GFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIK 297

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-VRPNAFTYSTL 127
           +A  +   M   G +P + T+NV+   LC+ GK+DEA +L D M     V P+  TY+TL
Sbjct: 298 QATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTL 357

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D      + + A  L   M   G K   V++NI++ G C+  ++EEAL   + M  +G+
Sbjct: 358 VDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGL 417

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P V+TYNTL     +   V  A  L +EM R  +  DT T NT +  LCK     EA E
Sbjct: 418 APDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEE 477

Query: 248 LFRT-----------------------------------LGILKCELDIQAYNCLIDGLC 272
           L R+                                   +   K    I  YN LI GLC
Sbjct: 478 LLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLC 537

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
             G+L  A++    L ++ LV D  TYNI+IH  C +G ++KA      M EN   P+V+
Sbjct: 538 TIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVV 597

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEK 360
              TL++G     K  K I+L     EK
Sbjct: 598 TCNTLMNGLCLHGKLEKAIKLFESWAEK 625



 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 171/356 (48%), Gaps = 3/356 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKAL--FLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +P+    N ++  L +        +L  F  +    ++P+  T+N L+H  C      +A
Sbjct: 170 RPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADA 229

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
                 M   G+ P VVT+N ++   C+ G + EA  LL  M +  + P   TY+TL+  
Sbjct: 230 LSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSA 289

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI-KP 189
           +   G I +A  +  +M + G + D  +YN+L  G C+  +V+EA  L  EM    I  P
Sbjct: 290 YARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSP 349

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VVTYNTL    F+  +   AL L EEM+   V +   T+N  + GLC+ G + EA+   
Sbjct: 350 DVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRL 409

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + +       D+  YN LID  CK+  +  A  L   + R  L  D  T N +++ LC +
Sbjct: 410 KMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKE 469

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            + ++A +L     +    P+ + + T++  + + NKP   + L  +M ++K+ P 
Sbjct: 470 KRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPS 525



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 170/369 (46%), Gaps = 36/369 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TYNT+ID  CK   V KA  L  +M    +  D  T N+L++ LC    + EA+ L
Sbjct: 419 PDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEEL 478

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
                 +G  P  V++  +M    K  K + A  L D M +R + P+ +TY+TL+ G C 
Sbjct: 479 LRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCT 538

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A +    +   G   DD +YNI+I+ YCK  ++E+A   + +M+    KP VVT
Sbjct: 539 IGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVT 598

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            NTL  GL    ++E A+KLFE         D  TYNT I  LCK+G +  A+  F  + 
Sbjct: 599 CNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADME 658

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA------------------- 294
               + D   YN ++  L ++GR E A  +   L     ++                   
Sbjct: 659 ARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGK 718

Query: 295 -----------------DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
                            D  +YN  +  LC  GQ+ +A  +  +M +  ++ +   ++TL
Sbjct: 719 DPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITL 778

Query: 338 IHGFVRINK 346
           + G ++  K
Sbjct: 779 MEGLIKRQK 787



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 3/193 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VT NT+++GLC  G ++KA  LF     +    DV+TYN+LI  LC   D + A  
Sbjct: 593 KPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALH 652

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F +M  +G+QP   T+NV++  L + G+ +EA  +L  + +       F+Y  L+    
Sbjct: 653 FFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYP-LIKSSA 711

Query: 133 LTGKINRAEELFGSMESMGCKH--DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
              K  +  E+    ES G     D  SYN  +   C   +++EA ++  EM+ KG+   
Sbjct: 712 EEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVD 771

Query: 191 VVTYNTLFLGLFE 203
             TY TL  GL +
Sbjct: 772 SSTYITLMEGLIK 784



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRL--EIALELFRSLPRRVLVADVVTYNIMIHGL 306
           FR  G ++  L  QA N ++  L +S     + +L++FRSL    L  +  T+N+++H  
Sbjct: 163 FRRRGHVRPSL--QAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTH 220

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C+ G +  A      M+   ++P+V+ + TL+    R     +   LL +MK++ + P  
Sbjct: 221 CSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTR 280

Query: 367 SIVSMVVD 374
           +  + +V 
Sbjct: 281 ATYNTLVS 288


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/356 (33%), Positives = 185/356 (51%), Gaps = 3/356 (0%)

Query: 13  KPNTVTYNTIIDGLCK---EGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           +P  +T NT+++ L +      +  +KA+F       +  +  ++N LIHG C  N + E
Sbjct: 156 QPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGE 215

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A R+  +M D G  P  +T+N I+D LCK G+++EA  LL  M  + + PN  T++ L+ 
Sbjct: 216 AIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVV 275

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C  G +  A  +   M       D  +YN++I+G+CK   + EA+ L  EM +  + P
Sbjct: 276 GCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSP 335

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VVTYNTL  G FE    E   KL EEM+   +  ++ TYN  +    K G + E  +  
Sbjct: 336 DVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTV 395

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           R +    C  DI  YN LI   CK G+++ A  L   + R+ L  D VT N M+  LC +
Sbjct: 396 RKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRE 455

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            ++D+AHDL           + + + TLI G+ +  K S+ + L  +MKEK+++P 
Sbjct: 456 RKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPS 511



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 186/347 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+I+G  + G  ++   L  +M+G  + P+ VTYN ++         +E  + 
Sbjct: 335 PDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKT 394

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M + G  P +VT+N ++   CK GKMDEA RL+D M ++ ++ +  T +T++   C 
Sbjct: 395 VRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCR 454

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K++ A +L  S    G   D+VSY  LI GY K+++  +AL L+ EM  K I P+++T
Sbjct: 455 ERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIIT 514

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN++  GL ++ +   A+   +E+    +  D  TYNT I G C+ G + +A +    + 
Sbjct: 515 YNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMV 574

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+   N L+ GLCK G LE AL+LF +   +    D V+YN +I  LC + +  
Sbjct: 575 EKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFG 634

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +A DL  +MEE  + P+   +  ++ G     +     E + K+ EK
Sbjct: 635 EAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEK 681



 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 115/355 (32%), Positives = 192/355 (54%), Gaps = 6/355 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN +I G CK+G + +A  L  +M+   ++PDVVTYN+LI+G        E  +L
Sbjct: 300 PDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKL 359

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G++P+ VT+NV++    K GKMDE  + +  M +    P+  TY+TL+   C 
Sbjct: 360 IEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCK 419

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A  L   M   G K DDV+ N ++   C+ ++++EA  L      +G     V+
Sbjct: 420 VGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVS 479

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           Y TL +G F+  +   AL+L++EM+  ++     TYN+ I GLC+ G   +A++    L 
Sbjct: 480 YGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELL 539

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             G++  E+    YN +I G C+ G++E A +    +  +    DVVT N ++ GLC +G
Sbjct: 540 ESGLVPDEI---TYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEG 596

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            ++KA  LF          + + + T+I    +  +  +  +LL +M+EKK+ PD
Sbjct: 597 MLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPD 651



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 198/367 (53%), Gaps = 2/367 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           +IGV  K NT ++N +I G C E    +A  +  +M+     PD +TYN+++ GLC    
Sbjct: 190 KIGV--KINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGR 247

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            NEA+ L  +M ++G+ P+  TFN+++   C+ G + EA+ +++LM Q  V P+A+TY+ 
Sbjct: 248 LNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNV 307

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ GFC  G+I  A  L   ME++    D V+YN LING  ++   EE   L  EM  +G
Sbjct: 308 MISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRG 367

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +KP  VTYN +     +  +++   K   +M+      D  TYNT I   CK G + EA 
Sbjct: 368 MKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAF 427

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            L   +G    ++D    N ++  LC+  +L+ A +L  S  RR    D V+Y  +I G 
Sbjct: 428 RLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGY 487

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
               +  +A  L+ +M+E  + P++I + ++I G  ++ K ++ I+ L ++ E  ++PD 
Sbjct: 488 FKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDE 547

Query: 367 SIVSMVV 373
              + ++
Sbjct: 548 ITYNTII 554



 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 193/398 (48%), Gaps = 37/398 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TYNTI+DGLCK+G +++A+ L L MK + + P+  T+N L+ G C      EA 
Sbjct: 228 CPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAA 287

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   M    V P   T+NV++   CK G++ EA RL + M    + P+  TY+TL++G 
Sbjct: 288 NVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGC 347

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G      +L   ME  G K + V+YN+++  + K  +++E     R+M   G  P +
Sbjct: 348 FEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDI 407

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK------------- 238
           VTYNTL     ++ +++ A +L +EM R  +  D  T NT +  LC+             
Sbjct: 408 VTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCS 467

Query: 239 ---NGYIVEAVELFRTL--GILKCELDIQA------------------YNCLIDGLCKSG 275
               GY V+ V  + TL  G  K E   QA                  YN +I GLC+ G
Sbjct: 468 ARRRGYFVDEVS-YGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMG 526

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           +   A++    L    LV D +TYN +IHG C +GQ++KA      M E    P+V+   
Sbjct: 527 KTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCN 586

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           TL+ G  +     K ++L +    K    DA   + ++
Sbjct: 587 TLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTII 624



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 152/313 (48%), Gaps = 35/313 (11%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN+VTYN ++    K+G +D+      +M+     PD+VTYN+LI   C     +EA R
Sbjct: 369 KPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFR 428

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS-------------------------- 106
           L  EM  +G++   VT N ++  LC+  K+DEA                           
Sbjct: 429 LMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYF 488

Query: 107 ---------RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
                    RL D M ++++ P+  TY++++ G C  GK N+A +    +   G   D++
Sbjct: 489 KHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEI 548

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +YN +I+GYC+  +VE+A   + +MV K  KP VVT NTL  GL +   +E ALKLF   
Sbjct: 549 TYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTW 608

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
                  D  +YNT I  LCK     EA +L   +   K   D   YN ++ GL  +GR+
Sbjct: 609 ISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRM 668

Query: 278 EIALELFRSLPRR 290
           + A E    +  +
Sbjct: 669 KDAEEFISKIAEK 681



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 135/269 (50%), Gaps = 3/269 (1%)

Query: 100 GKMDEASRLLDLMVQRDVRPNAFTYSTLMDG---FCLTGKINRAEELFGSMESMGCKHDD 156
           G+  +A+++ + M +  ++P   T +TL++    F  +  I  ++ +F     +G K + 
Sbjct: 138 GRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINT 197

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            S+NILI+G C      EA+ +  +M   G  P  +TYNT+  GL +  ++  A  L  +
Sbjct: 198 NSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLD 257

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M+   +  + +T+N  + G C+ G++ EA  +   +       D   YN +I G CK GR
Sbjct: 258 MKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGR 317

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +  A+ L   +    L  DVVTYN +I+G    G  ++   L  +ME   + PN + +  
Sbjct: 318 IAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNV 377

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++  FV+  K  +V + + KM+E   +PD
Sbjct: 378 MVKWFVKKGKMDEVDKTVRKMEESGCLPD 406



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 107/218 (49%), Gaps = 3/218 (1%)

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI---HQVEHALKLFEE 216
           +I I  Y       +A  ++  M   G++PT++T NTL   L      H +  +  +F +
Sbjct: 128 DISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTD 187

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
             +  V  +T+++N  I G C      EA+ +   +    C  D   YN ++DGLCK GR
Sbjct: 188 FIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGR 247

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           L  A +L   +  + L  +  T+NI++ G C  G + +A ++   M +N+V P+   +  
Sbjct: 248 LNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNV 307

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +I GF +  + ++ + L  +M+  K+ PD    + +++
Sbjct: 308 MISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLIN 345



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 23/147 (15%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VT NT++ GLCKEG ++KA  LF     +  + D V+YN++I  LC    + EA  
Sbjct: 579 KPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFD 638

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA--------------SRLLDLMVQRDVR 118
           L  EM ++ + P   T+N I+  L   G+M +A              ++ L+L  ++D R
Sbjct: 639 LLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFLELGKRQDAR 698

Query: 119 ---------PNAFTYSTLMDGFCLTGK 136
                    PNA  YS  ++  C  G+
Sbjct: 699 TSEIPQEPHPNAIAYSNKINELCSQGR 725


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 189/364 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N   YN ++D   ++    +   +  +M+   + P V TY  L+ GL  A D ++ + 
Sbjct: 165 KLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVES 224

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F E+  + V   V  ++ +++  C+ G +  AS + D  V   + PN  TY  L++GFC
Sbjct: 225 VFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFC 284

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+I  AE L   M+  G  H+ + +N +I+GYC++  V++AL +   M   GI+  V 
Sbjct: 285 KIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVY 344

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GL  ++++E A KL   M  + V ++  +Y T I    K G +VEA  LFR +
Sbjct: 345 TYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDM 404

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   +  YN +IDG  KSG +  A    + + ++ LV DV TY  ++HG C +G++
Sbjct: 405 EGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKV 464

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  LF +M++    PNV+ +  LI G  +  +  +  +    M    + PD ++ SM+
Sbjct: 465 DVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSML 524

Query: 373 VDLL 376
           V  L
Sbjct: 525 VGSL 528



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 165/337 (48%), Gaps = 35/337 (10%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P   TY  ++DGL   G + K +++F ++K +N+  DV  Y+++I+  C A +   A  
Sbjct: 200 EPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASE 259

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F E +  G++P+  T+  +++  CK G+++ A  LL  M  R V  N   ++T++DG+C
Sbjct: 260 VFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYC 319

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE------------------- 173
             G +++A E+   ME MG + D  +YN L  G C+   +E                   
Sbjct: 320 RHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYV 379

Query: 174 ----------------EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
                           EA  L+R+M  KG +P+VVTYN +  G  +   +  A +  +EM
Sbjct: 380 SYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEM 439

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
           ++  +  D  TY   + G C NG +  A+ LF  +     + ++ AY  LI GL K GR 
Sbjct: 440 EKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRS 499

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           E A + + ++    L  D   Y++++  L  D + D+
Sbjct: 500 EEAFQFYDNMLAAGLTPDDTLYSMLVGSLHTDKRKDE 536



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 158/317 (49%)

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
           ++ G C A   ++A+RL  EM   GV+ +   +N ++D   +       + +L  M    
Sbjct: 139 VVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGG 198

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           V P   TY+ L+DG    G I++ E +F  ++      D   Y+ +IN YC+   V  A 
Sbjct: 199 VEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRAS 258

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            ++ E V  GI+P   TY  L  G  +I Q+E A  L  +MQ   V  +   +NT IDG 
Sbjct: 259 EVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGY 318

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           C++G + +A+E+   +  +  +LD+  YN L  GLC+  R+E A +L   +    + ++ 
Sbjct: 319 CRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNY 378

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           V+Y  +I     +G M +A  LF DME     P+V+ +  +I G+++     +      +
Sbjct: 379 VSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKE 438

Query: 357 MKEKKVMPDASIVSMVV 373
           M++K ++PD    + +V
Sbjct: 439 MEKKGLVPDVYTYAALV 455



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 133/264 (50%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G   +PN  TY  +I+G CK G ++ A+ L   M+   +  + + +N++I G C     
Sbjct: 265 VGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMV 324

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  +   M   G+Q  V T+N +   LC+  +M++A +LL +M +  V  N  +Y+TL
Sbjct: 325 DKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTL 384

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +      G +  A  LF  ME  G +   V+YN++I+GY K+  + EA    +EM  KG+
Sbjct: 385 ISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGL 444

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P V TY  L  G     +V+ AL+LFEEM++     +   Y   I GL K G   EA +
Sbjct: 445 VPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQ 504

Query: 248 LFRTLGILKCELDIQAYNCLIDGL 271
            +  +       D   Y+ L+  L
Sbjct: 505 FYDNMLAAGLTPDDTLYSMLVGSL 528



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 138/316 (43%), Gaps = 39/316 (12%)

Query: 85  SVVTF-NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEEL 143
           +V +F +++       G  D A+  LDL V R    +  + ++ +     TG +  A EL
Sbjct: 60  AVASFHDMLFRAYADAGAPDRAAEALDLTVSRLGSLDPRSLTSSLLSLRRTGHLLPAAEL 119

Query: 144 FGSM--ESMGCKHDDVSYNILINGYCKNKEVEEALSL----------------------- 178
                    GC    +S +++++G+CK   +++A  L                       
Sbjct: 120 LRKALASCPGCI-TPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTY 178

Query: 179 ------------YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
                        +EM S G++PTV TY  L  GL     +     +F+E++R +VA D 
Sbjct: 179 TRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDV 238

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
             Y+  I+  C+ G +  A E+F        E + + Y  LI+G CK G++E A  L   
Sbjct: 239 YFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTD 298

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +  R +  + + +N MI G C  G +DKA ++   ME   +  +V  + TL  G  R+N+
Sbjct: 299 MQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNR 358

Query: 347 PSKVIELLHKMKEKKV 362
                +LLH M E  V
Sbjct: 359 MEDAKKLLHIMTENGV 374



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 86/185 (46%)

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           T ++ + +  G  +  +++ A +L +EM R  V  +   YN  +D   +        E+ 
Sbjct: 132 TPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVL 191

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + +     E  +  Y  L+DGL  +G +     +F  + R+ +  DV  Y+ +I+  C  
Sbjct: 192 KEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRA 251

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G + +A ++F +   N + PN   +  LI+GF +I +      LL  M+ + V  +  I 
Sbjct: 252 GNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIF 311

Query: 370 SMVVD 374
           + ++D
Sbjct: 312 NTMID 316



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 3/137 (2%)

Query: 240 GYIVEAVELFRTLGILKCELDIQ--AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           G+++ A EL R   +  C   I   + + ++DG CK+GR++ A  L   +PR  +  +  
Sbjct: 111 GHLLPAAELLRK-ALASCPGCITPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNAC 169

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            YN ++          +  ++  +ME   V P V  +  L+ G       SKV  +  ++
Sbjct: 170 CYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEI 229

Query: 358 KEKKVMPDASIVSMVVD 374
           K K V  D    S V++
Sbjct: 230 KRKNVAGDVYFYSAVIN 246


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 190/374 (50%), Gaps = 11/374 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E G+V  PN VTY+ +IDG CK G ++KA   + +MK + I   V + NS++ G      
Sbjct: 173 ESGLV--PNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQS 230

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           W  A  +F + ++ G+  +V TFN ++  LCK GKM+EA  L D ++ + + PN  +Y+ 
Sbjct: 231 WQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNN 289

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ G C    IN A +++  M   G   + V++ IL++GY K  ++E A S++  M    
Sbjct: 290 IILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDAN 349

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I PT  T   +  GL +  +      LF +            YNT IDG  K G I  A 
Sbjct: 350 ILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLAS 409

Query: 247 ELFRTLGILKCELDIQ----AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            ++R +    CE+ I      Y  LIDG CK   +++AL+L   + R+ L  D+  Y  +
Sbjct: 410 NVYREM----CEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTL 465

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I G C    M  AH+L  ++    ++PN  I+ ++I GF  +N   + I+L  KM  + +
Sbjct: 466 IDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGI 525

Query: 363 MPDASIVSMVVDLL 376
             D    + ++D L
Sbjct: 526 PCDLKTYTSLIDGL 539



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 201/395 (50%), Gaps = 35/395 (8%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T+NT++  LCKEG +++A  L+ ++  + I+P+VV+YN++I G C  ++ N A +++
Sbjct: 248 NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVY 307

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+D G  P+ VTF ++MD   K G ++ A  +   M   ++ P   T   ++ G C  
Sbjct: 308 KEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKA 367

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+     +LF    S G     + YN +I+G+ K   +  A ++YREM   GI P+ VTY
Sbjct: 368 GRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTY 427

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK---------------- 238
            +L  G  + + ++ ALKL  +M+R  +  D   Y T IDG CK                
Sbjct: 428 TSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRG 487

Query: 239 -----NGYIV--------------EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
                N +I               EA++L++ +       D++ Y  LIDGL KSGRL  
Sbjct: 488 AGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLY 547

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A ++   +  + ++ D   + ++I+GLCN GQ + A  +  DM    + P+V+I+ TLI 
Sbjct: 548 ASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIA 607

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           G  +     +   L  +M ++ ++PD     ++V+
Sbjct: 608 GHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVN 642



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 182/330 (55%), Gaps = 6/330 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VT+  ++DG  K+G ++ A ++F +MK  NI P   T   +I GLC A    E + L
Sbjct: 317 PNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDL 376

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F + + QG  P+ + +N I+D   K G ++ AS +   M +  + P+  TY++L+DGFC 
Sbjct: 377 FNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCK 436

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              I+ A +L   M+  G K D  +Y  LI+G+CK ++++ A  L  E+   G+ P    
Sbjct: 437 GNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFI 496

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           YN++  G   ++ VE A+ L+++M  + +  D  TY + IDGL K+G ++ A ++   + 
Sbjct: 497 YNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEML 556

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             GIL    D +A+  LI+GLC  G+ E A ++   +  + ++  V+ YN +I G   +G
Sbjct: 557 SKGILP---DDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEG 613

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            + +A  L  +M +  + P+ I +  L++G
Sbjct: 614 NLQEAFRLHDEMLDRGLVPDNITYDILVNG 643



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 169/357 (47%), Gaps = 1/357 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T + ++    KEG + +A+  FLQ K   +  D   Y+  +H LC   +   A  L  EM
Sbjct: 42  TLHVMLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREM 101

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
              G  P   TF  ++    K G + EA RL D MV      N    ++LM G+C+ G +
Sbjct: 102 RAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNL 161

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A  L   +   G   + V+Y++LI+G CKN  +E+A   Y EM +KGI+ +V + N++
Sbjct: 162 RSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSI 221

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G  +    ++A  +F +     + A+  T+NT +  LCK G + EA  L+  +     
Sbjct: 222 LEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGI 280

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             ++ +YN +I G C+   +  A ++++ +       + VT+ I++ G    G ++ A  
Sbjct: 281 SPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFS 340

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +F  M++  + P       +I G  +  +  +  +L +K   +  +P     + ++D
Sbjct: 341 IFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIID 397



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 118/229 (51%), Gaps = 2/229 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+G+   P+TVTY ++IDG CK   +D A  L   MK + +  D+  Y +LI G C   D
Sbjct: 417 EVGIT--PSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRD 474

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
              A  L  E+   G+ P+   +N ++        ++EA  L   MV   +  +  TY++
Sbjct: 475 MKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTS 534

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+DG   +G++  A ++   M S G   DD ++ +LING C   + E A  +  +M  K 
Sbjct: 535 LIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKN 594

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
           + P+V+ YNTL  G F+   ++ A +L +EM    +  D  TY+  ++G
Sbjct: 595 MIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 150/361 (41%), Gaps = 34/361 (9%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           + P +   N L+  +   N   EA+ L  +M+  GV     T +V++    K G + EA 
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
           +       R V  +   YS  +   CL      A  L   M + G    + ++  +I   
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
            K   V EAL L  +MV+ G    +    +L  G      +  AL L  E+    +  + 
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTL-----------------GILKCE----------- 258
            TY+  IDG CKNG I +A E +  +                 G LKC+           
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240

Query: 259 ------LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++  +N L+  LCK G++  A  L+  +  + +  +VV+YN +I G C    +
Sbjct: 241 ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNI 300

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A  ++ +M +N   PN + F  L+ G+ +         + H+MK+  ++P  + + ++
Sbjct: 301 NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGII 360

Query: 373 V 373
           +
Sbjct: 361 I 361



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 79/188 (42%)

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P++   N L   +   +    A +L  +M    V  D  T +  +    K G I+EA 
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           + F        ELD +AY+  +  LC       AL L R +     +    T+  +I   
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             +G + +A  L  DM     + N+ +  +L+ G+         + L++++ E  ++P+ 
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 367 SIVSMVVD 374
              S+++D
Sbjct: 181 VTYSVLID 188


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 189/415 (45%), Gaps = 70/415 (16%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N VTY  +IDG C+ G +  A  L   M    + PD  TYN+++ GLC A  W EA+ L 
Sbjct: 186 NVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKGLCFAKQWEEAEELM 242

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF--- 131
            EM+     P+ VTF   +   C+NG +D A  LL+ M +    P+   YSTL++GF   
Sbjct: 243 REMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEH 302

Query: 132 -----------------------------CLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
                                        C+ G+ +   EL   M    C  +D +++ L
Sbjct: 303 GRVDDALKLLSTMLCRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTL 362

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE------- 215
           IN  C+N+  E A+ +  +M   G  P VV+YNT+     E    + ALKL         
Sbjct: 363 INSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSMLCKPD 422

Query: 216 -------------------------EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
                                    +M ++D   +  T+N  ID LC+NG + +A+E+F 
Sbjct: 423 TISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFE 482

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +   +C  DI  Y+ LI+G  + G  ++A +LFRS+P R   AD+ +YN  + GLC   
Sbjct: 483 LMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCR---ADIFSYNATLKGLCMAA 539

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + D A +L  DM      PN + F  LI+   +    ++ IE+  +M +  + PD
Sbjct: 540 RWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPD 594



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 175/356 (49%), Gaps = 9/356 (2%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           ++C+PNTV YN  + GLC  G  D+   L  +M  ++  P+  T+++LI+ LC       
Sbjct: 315 MLCRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEY 374

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +  +M   G  P VV++N I+    +    D+A +LL+ M+    +P+  +++ ++ 
Sbjct: 375 AIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSML---CKPDTISFNAVLK 431

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             C   +   A EL   M    C  +++++NILI+  C+N +V++A+ ++  M      P
Sbjct: 432 CLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTP 491

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            +VTY++L  G  E    + A  LF  M      AD  +YN  + GLC      +A EL 
Sbjct: 492 DIVTYSSLINGFSEQGLDKVAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELI 548

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +    C  +   +N LI+ LC+ G +  A+E++  +P+  +  D+ TYN +I+G    
Sbjct: 549 ADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQ 608

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           G +D A      M      P+ I + +++ G  R  +     +L+ +M  K   P+
Sbjct: 609 GCLDDALKFLSTM---PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPN 661



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 163/332 (49%), Gaps = 9/332 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T++T+I+ LC+    + A  +  QM+     PDVV+YN++I         ++A 
Sbjct: 352 CPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDAL 411

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M+    +P  ++FN ++  LC+  +  +A+ L+  M++ D   N  T++ L+D  
Sbjct: 412 KLLNSML---CKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSL 468

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++  A E+F  M    C  D V+Y+ LING+ +    + A  L+R M  +     +
Sbjct: 469 CQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCRA---DI 525

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +YN    GL    + + A +L  +M   D   +  T+N  I+ LC+ G +  A+E++  
Sbjct: 526 FSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQ 585

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       DI  YN LI+G  + G L+ AL+   ++P      D ++YN ++ GLC   +
Sbjct: 586 MPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTMP---CEPDTISYNSILKGLCRAER 642

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
              A  L  +M      PN + F      F++
Sbjct: 643 WKDAEKLVTEMLRKNCTPNEVTFKYANQLFIK 674



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 150/282 (53%), Gaps = 8/282 (2%)

Query: 84  PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEEL 143
           P+V+T N+++ +LC   ++ +A R+L+ + +     +A +++TL+ G+C  G +  AE +
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEAL-KTSGAADAVSHNTLVAGYCRDGSLWDAERV 175

Query: 144 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 203
             +  + G   + V+Y  LI+GYC++  + +AL L   + S  + P   TYNT+  GL  
Sbjct: 176 LEAARASG-AANVVTYTALIDGYCRSGRLTDALRL---IASMPVAPDTYTYNTVLKGLCF 231

Query: 204 IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQA 263
             Q E A +L  EM R++   +  T+ T I   C+NG +  AVEL   +    C  D+  
Sbjct: 232 AKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVI 291

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
           Y+ L++G  + GR++ AL+L  ++  R    + V YN  + GLC  G+ D+  +L  +M 
Sbjct: 292 YSTLVNGFSEHGRVDDALKLLSTMLCR---PNTVCYNAALKGLCIAGRWDEVGELIAEMV 348

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
                PN   F TLI+   +       IE+L +M++   MPD
Sbjct: 349 RKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPD 390



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 152/309 (49%), Gaps = 8/309 (2%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P V+T N LI  LC      +A+R+   +   G     V+ N ++   C++G + +A R+
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSGAA-DAVSHNTLVAGYCRDGSLWDAERV 175

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
           L+   +     N  TY+ L+DG+C +G++  A  L  SM       D  +YN ++ G C 
Sbjct: 176 LE-AARASGAANVVTYTALIDGYCRSGRLTDALRLIASMPV---APDTYTYNTVLKGLCF 231

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
            K+ EEA  L REM+     P  VT+ T      +   ++ A++L E+M +     D   
Sbjct: 232 AKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVI 291

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           Y+T ++G  ++G + +A++L  T   + C  +   YN  + GLC +GR +   EL   + 
Sbjct: 292 YSTLVNGFSEHGRVDDALKLLST---MLCRPNTVCYNAALKGLCIAGRWDEVGELIAEMV 348

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
           R+    +  T++ +I+ LC +   + A ++   M++    P+V+ + T+I  F       
Sbjct: 349 RKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACAD 408

Query: 349 KVIELLHKM 357
             ++LL+ M
Sbjct: 409 DALKLLNSM 417



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 97/189 (51%), Gaps = 11/189 (5%)

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA--- 245
           P V+T N L   L    ++  A ++ E ++    AAD  ++NT + G C++G + +A   
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSG-AADAVSHNTLVAGYCRDGSLWDAERV 175

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           +E  R  G      ++  Y  LIDG C+SGRL  AL L  S+P   +  D  TYN ++ G
Sbjct: 176 LEAARASG----AANVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKG 228

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC   Q ++A +L  +M  N   PN + F T I  F +     + +ELL +M +   MPD
Sbjct: 229 LCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPD 288

Query: 366 ASIVSMVVD 374
             I S +V+
Sbjct: 289 VVIYSTLVN 297


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/327 (34%), Positives = 176/327 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   +N ++ G CK G V  A+ +F ++    + P VV++N+LI G C A    E  RL
Sbjct: 140 PNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRL 199

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  + V P V TF+ +++ LCK G++DE S L D M  + + PN  T++ L+DG C 
Sbjct: 200 KGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCK 259

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A + F  M + G + D V+YN LING CK  +++EA  L  EM + G++P  +T
Sbjct: 260 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRIT 319

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           + TL  G  +   +E AL++   M  + +  D   +   I GLC++G + +A  + R + 
Sbjct: 320 FTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDML 379

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D   Y  ++D  CK G + +  +L + +     V  VVTYN +++GLC  GQ+ 
Sbjct: 380 SAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVK 439

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHG 340
            A  L   M    VAPN I +  L+ G
Sbjct: 440 NAKMLLDAMLNVGVAPNDITYNILLEG 466



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 176/334 (52%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           ++++ A +L++      P+   +N L+HG C       A+ +F E+  +G++P+VV+FN 
Sbjct: 123 LERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNT 182

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           ++   CK G ++E  RL  +M    V P+ FT+S L++G C  G+++    LF  M   G
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG 242

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
              + V++ +LI+G CK  +V+ AL  ++ M+++G++P +VTYN L  GL ++  ++ A 
Sbjct: 243 LVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 302

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           +L  EM    +  D  T+ T IDG CK G +  A+E+ R +     ELD  A+  LI GL
Sbjct: 303 RLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGL 362

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C+ GR+  A  + R +       D  TY +++   C  G +     L  +M+ +   P V
Sbjct: 363 CRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGV 422

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + +  L++G  +  +      LL  M    V P+
Sbjct: 423 VTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPN 456



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 161/299 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  V++NT+I G CK G V++   L   M+ E + PDV T+++LI+GLC     +E   
Sbjct: 174 RPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSL 233

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  +G+ P+ VTF V++D  CK GK+D A +   +M+ + VRP+  TY+ L++G C
Sbjct: 234 LFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLC 293

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  L   M + G + D +++  LI+G CK  ++E AL + R MV +GI+   V
Sbjct: 294 KVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDV 353

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            +  L  GL    +V  A ++  +M       D  TY   +D  CK G +    +L + +
Sbjct: 354 AFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEM 413

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                   +  YN L++GLCK G+++ A  L  ++    +  + +TYNI++ G    G 
Sbjct: 414 QSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGS 472



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/264 (36%), Positives = 148/264 (56%), Gaps = 5/264 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VT+  +IDG CK G VD A   F  M  + + PD+VTYN+LI+GLC   D  EA+RL
Sbjct: 245 PNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRL 304

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G++P  +TF  ++D  CK G M+ A  +   MV+  +  +   ++ L+ G C 
Sbjct: 305 VNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCR 364

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ AE +   M S G K DD +Y ++++ +CK   V     L +EM S G  P VVT
Sbjct: 365 DGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVT 424

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT-L 252
           YN L  GL +  QV++A  L + M    VA +  TYN  ++G  K+G  V+ V++F +  
Sbjct: 425 YNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVD-VDIFNSEK 483

Query: 253 GILKCELDIQAYNCLIDGLCKSGR 276
           G++K   D  +Y  L++   K+ +
Sbjct: 484 GLVK---DYASYTALVNESSKTSK 504



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 123/256 (48%)

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           PN F ++ LM GFC  G +  A  +F  +   G +   VS+N LI+G CK   VEE   L
Sbjct: 140 PNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRL 199

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
              M S+ + P V T++ L  GL +  +++    LF+EM    +  +  T+   IDG CK
Sbjct: 200 KGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCK 259

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
            G +  A++ F+ +       D+  YN LI+GLCK G L+ A  L   +    L  D +T
Sbjct: 260 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRIT 319

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           +  +I G C  G M+ A ++   M E  +  + + F  LI G  R  +      +L  M 
Sbjct: 320 FTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDML 379

Query: 359 EKKVMPDASIVSMVVD 374
                PD    +MVVD
Sbjct: 380 SAGFKPDDPTYTMVVD 395



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 6/207 (2%)

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
           E+E + + Y E++  G  P    +N L  G  ++  V  A  +F+E+ +  +     ++N
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCEL---DIQAYNCLIDGLCKSGRLEIALELFRSL 287
           T I G CK G + E    FR  G+++ E    D+  ++ LI+GLCK GRL+    LF  +
Sbjct: 182 TLISGCCKAGAVEEG---FRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEM 238

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
             + LV + VT+ ++I G C  G++D A   F  M    V P+++ +  LI+G  ++   
Sbjct: 239 CGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDL 298

Query: 348 SKVIELLHKMKEKKVMPDASIVSMVVD 374
            +   L+++M    + PD    + ++D
Sbjct: 299 KEARRLVNEMSASGLRPDRITFTTLID 325


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 190/374 (50%), Gaps = 11/374 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E G+V  PN VTY+ +IDG CK G ++KA   + +MK + I   V + NS++ G      
Sbjct: 291 ESGLV--PNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQS 348

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           W  A  +F + ++ G+  +V TFN ++  LCK GKM+EA  L D ++ + + PN  +Y+ 
Sbjct: 349 WQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNN 407

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ G C    IN A +++  M   G   + V++ IL++GY K  ++E A S++  M    
Sbjct: 408 IILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDAN 467

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I PT  T   +  GL +  +      LF +            YNT IDG  K G I  A 
Sbjct: 468 ILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLAS 527

Query: 247 ELFRTLGILKCELDIQ----AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            ++R +    CE+ I      Y  LIDG CK   +++AL+L   + R+ L  D+  Y  +
Sbjct: 528 NVYREM----CEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTL 583

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I G C    M  AH+L  ++    ++PN  I+ ++I GF  +N   + I+L  KM  + +
Sbjct: 584 IDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGI 643

Query: 363 MPDASIVSMVVDLL 376
             D    + ++D L
Sbjct: 644 PCDLKTYTSLIDGL 657



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 201/395 (50%), Gaps = 35/395 (8%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T+NT++  LCKEG +++A  L+ ++  + I+P+VV+YN++I G C  ++ N A +++
Sbjct: 366 NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVY 425

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+D G  P+ VTF ++MD   K G ++ A  +   M   ++ P   T   ++ G C  
Sbjct: 426 KEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKA 485

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+     +LF    S G     + YN +I+G+ K   +  A ++YREM   GI P+ VTY
Sbjct: 486 GRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTY 545

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK---------------- 238
            +L  G  + + ++ ALKL  +M+R  +  D   Y T IDG CK                
Sbjct: 546 TSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRG 605

Query: 239 -----NGYIV--------------EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
                N +I               EA++L++ +       D++ Y  LIDGL KSGRL  
Sbjct: 606 AGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLY 665

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A ++   +  + ++ D   + ++I+GLCN GQ + A  +  DM    + P+V+I+ TLI 
Sbjct: 666 ASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIA 725

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           G  +     +   L  +M ++ ++PD     ++V+
Sbjct: 726 GHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVN 760



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 182/330 (55%), Gaps = 6/330 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VT+  ++DG  K+G ++ A ++F +MK  NI P   T   +I GLC A    E + L
Sbjct: 435 PNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDL 494

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F + + QG  P+ + +N I+D   K G ++ AS +   M +  + P+  TY++L+DGFC 
Sbjct: 495 FNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCK 554

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              I+ A +L   M+  G K D  +Y  LI+G+CK ++++ A  L  E+   G+ P    
Sbjct: 555 GNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFI 614

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           YN++  G   ++ VE A+ L+++M  + +  D  TY + IDGL K+G ++ A ++   + 
Sbjct: 615 YNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEML 674

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             GIL    D +A+  LI+GLC  G+ E A ++   +  + ++  V+ YN +I G   +G
Sbjct: 675 SKGILP---DDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEG 731

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            + +A  L  +M +  + P+ I +  L++G
Sbjct: 732 NLQEAFRLHDEMLDRGLVPDNITYDILVNG 761



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 170/359 (47%), Gaps = 3/359 (0%)

Query: 16  TVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFF 75
           T  YN  +D   +EG + +A+  FLQ K   +  D   Y+  +H LC   +   A  L  
Sbjct: 160 TKLYNFPLD--IQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLR 217

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
           EM   G  P   TF  ++    K G + EA RL D MV      N    ++LM G+C+ G
Sbjct: 218 EMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQG 277

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
            +  A  L   +   G   + V+Y++LI+G CKN  +E+A   Y EM +KGI+ +V + N
Sbjct: 278 NLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLN 337

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           ++  G  +    ++A  +F +     + A+  T+NT +  LCK G + EA  L+  +   
Sbjct: 338 SILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAK 396

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
               ++ +YN +I G C+   +  A ++++ +       + VT+ I++ G    G ++ A
Sbjct: 397 GISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENA 456

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +F  M++  + P       +I G  +  +  +  +L +K   +  +P     + ++D
Sbjct: 457 FSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIID 515



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 118/229 (51%), Gaps = 2/229 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+G+   P+TVTY ++IDG CK   +D A  L   MK + +  D+  Y +LI G C   D
Sbjct: 535 EVGIT--PSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRD 592

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
              A  L  E+   G+ P+   +N ++        ++EA  L   MV   +  +  TY++
Sbjct: 593 MKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTS 652

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+DG   +G++  A ++   M S G   DD ++ +LING C   + E A  +  +M  K 
Sbjct: 653 LIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKN 712

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
           + P+V+ YNTL  G F+   ++ A +L +EM    +  D  TY+  ++G
Sbjct: 713 MIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761


>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
 gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 198/364 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  + +N ++  + +    +   +LF +M+   I  +V T + LI+  C  +  +    
Sbjct: 37  QPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFS 96

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F + + +G +P VV F  ++D +C+ GK + A+ LL  M      P+  T ++LM G+C
Sbjct: 97  VFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYC 156

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GKI++  ++F  M S G K D  SY+I INGYCK ++++EA+ L+ EM  +G+ P  V
Sbjct: 157 SQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAV 216

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL   L +  +   A  LF +M    ++ D   Y+T +DG CK G + E + LF+ +
Sbjct: 217 TYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEM 276

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D+  Y  +I+G+C+S +++ A E+   L    L  DV TY  ++ GLC +G +
Sbjct: 277 QRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSI 336

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  LF  MEE+   P    +  L+ G ++ N  S V++L+H+M ++    DA   + +
Sbjct: 337 IEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTRTFL 396

Query: 373 VDLL 376
            D L
Sbjct: 397 KDFL 400



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 176/337 (52%)

Query: 30  GFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTF 89
           G +D A A F +M   N  P ++ +N L+  +     +     LF EM  +G++ +V T 
Sbjct: 19  GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78

Query: 90  NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
           +++++  C    +D    +    ++R  +P+   ++TL+DG C  GK   A  L   M  
Sbjct: 79  SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL 138

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
           +GC  D V+ N L+ GYC   ++++   ++  MVSKG+KP V +Y+    G  ++ +++ 
Sbjct: 139 VGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDE 198

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           A++LF+EM    V  +  TYNT I  LC+     +A  LFR +       DI AY+ L+D
Sbjct: 199 AMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLD 258

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           G CK G L+  L LF+ + RR++  D+V Y I+I+G+C   ++  A ++   +    + P
Sbjct: 259 GFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKP 318

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +V  +  L+ G  R     + + L  KM+E   MP +
Sbjct: 319 DVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGS 355



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 135/243 (55%), Gaps = 1/243 (0%)

Query: 7   EIGVV-CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           E+G+V C P+ VT N+++ G C +G +DK + +F  M  + + PDV +Y+  I+G C   
Sbjct: 135 EMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVE 194

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             +EA  LF EM  +GV P+ VT+N ++  LC+  +  +A  L   M    + P+   YS
Sbjct: 195 KIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYS 254

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+DGFC  G ++    LF  M+    K D V Y I+ING C++++V++A  +   ++ +
Sbjct: 255 TLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVE 314

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G+KP V TY  L  GL     +  AL+LF +M+ D     + +YN  + G  ++      
Sbjct: 315 GLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTV 374

Query: 246 VEL 248
           V+L
Sbjct: 375 VQL 377



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 140/275 (50%)

Query: 100 GKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
           G +D+A    + M+ R+ +P    ++ L+       K      LF  ME  G K++  + 
Sbjct: 19  GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           +ILIN +C    V+   S++ + + +G KP VV + TL  G+  I + E A  L +EM  
Sbjct: 79  SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL 138

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
                D  T N+ + G C  G I +  ++F  +     + D+ +Y+  I+G CK  +++ 
Sbjct: 139 VGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDE 198

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A+ELF  +  R +V + VTYN +I  LC   +   A  LF  M    ++P+++ + TL+ 
Sbjct: 199 AMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLD 258

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           GF +     +++ L  +M+ + V PD  + +++++
Sbjct: 259 GFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIIN 293



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY  ++DGLC+EG + +A  LF +M+ +   P   +YN L+ G    ND +   +
Sbjct: 317 KPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQ 376

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKN 99
           L  EM D+G     VT   + D L  N
Sbjct: 377 LIHEMADRGFYADAVTRTFLKDFLPGN 403


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 198/373 (53%), Gaps = 2/373 (0%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N   G    P+  +Y T+I+ L K G++  A  LF +M    + PDV  YN LI G    
Sbjct: 148 NWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKK 207

Query: 65  NDWNEAKRLFFEMMD-QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
            D   A  ++  ++    V P++ ++NV+++ LCK GK DE+  +   M + +   + +T
Sbjct: 208 GDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYT 267

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           YSTL+ G C +G ++ A  ++  M   G   D V YN ++NGY +   +EE L L++ M 
Sbjct: 268 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 327

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
            +G + TVV+YN L  GLFE  +V+ A+ ++E +   D  AD+ TY   + GLCKNGY+ 
Sbjct: 328 KEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLN 386

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           +A+ +       + +LD  AY+ +I+GLC+ GRL+    +   + +     +    N +I
Sbjct: 387 KALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVI 446

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           +G     +++ A   F +M      P V+ + TLI+G  +  + S+   L+ +M +K   
Sbjct: 447 NGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWK 506

Query: 364 PDASIVSMVVDLL 376
           P+    S++++ L
Sbjct: 507 PNMITYSLLMNGL 519



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 199/364 (54%), Gaps = 2/364 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P   +YN++++ L +    D+A++ FL  +   ++P++ TYN LI   C    +++AK
Sbjct: 85  CQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAK 144

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M  QG  P V ++  +++ L KNG M +A +L D M +R V P+   Y+ L+DGF
Sbjct: 145 ELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGF 204

Query: 132 CLTGKINRAEELFGSMESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
              G I  A E++  +      + ++ SYN++ING CK  + +E+  ++  M        
Sbjct: 205 FKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQD 264

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           + TY+TL  GL     ++ A ++++EM  + V+ D   YNT ++G  + G I E +EL++
Sbjct: 265 LYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWK 324

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C   + +YN LI GL ++ +++ A+ ++  LP +   AD +TY +++HGLC +G
Sbjct: 325 VMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNG 383

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            ++KA  +  + E      +   + ++I+G  R  +  +V  +L +M +    P+  + +
Sbjct: 384 YLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCN 443

Query: 371 MVVD 374
            V++
Sbjct: 444 AVIN 447



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 194/391 (49%), Gaps = 34/391 (8%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G    PN  +YN +I+GLCK G  D++  ++ +MK      D+ TY++LIHGLC + + +
Sbjct: 223 GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLD 282

Query: 69  EAKRLFFEMMDQGVQP----------------------------------SVVTFNVIMD 94
            A R++ EM + GV P                                  +VV++N+++ 
Sbjct: 283 GATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIR 342

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            L +N K+DEA  + +L+ ++D   ++ TY  L+ G C  G +N+A  +    E+     
Sbjct: 343 GLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL 402

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D  +Y+ +ING C+   ++E   +  +M   G KP     N +  G     ++E AL+ F
Sbjct: 403 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFF 462

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
             M          TYNT I+GL K     EA  L + +     + ++  Y+ L++GLC+ 
Sbjct: 463 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQG 522

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            +L++AL L+     +    DV  +NI+IHGLC+ G+++ A  L+ +M++    PN++  
Sbjct: 523 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTH 582

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            TL+ GF ++    +  ++   + +  + PD
Sbjct: 583 NTLMEGFYKVRDFERASKIWDHILQYGLQPD 613



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 175/328 (53%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V+YN +I GL +   VD+A +++  +  ++   D +TY  L+HGLC     N+A  +  E
Sbjct: 335 VSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEE 394

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
             +         ++ +++ LC+ G++DE + +LD M +   +PN +  + +++GF    K
Sbjct: 395 AENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASK 454

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +  A   FG+M S GC    V+YN LING  K +   EA +L +EM+ KG KP ++TY+ 
Sbjct: 455 LEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSL 514

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  GL +  +++ AL L+ +        D   +N  I GLC +G + +A++L+  +    
Sbjct: 515 LMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRN 574

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
           C  ++  +N L++G  K    E A +++  + +  L  D+++YNI + GLC+  ++  A 
Sbjct: 575 CVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAV 634

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRI 344
               D  +  V P  I +  L+ G++ +
Sbjct: 635 GFLNDAVDRGVLPTAITWNILVQGYLAL 662



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 157/294 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +++TY  ++ GLCK G+++KA ++  + +    + D   Y+S+I+GLC     +E  
Sbjct: 365 CCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVA 424

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  +M   G +P+    N +++   +  K+++A R    MV +   P   TY+TL++G 
Sbjct: 425 GVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGL 484

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               + + A  L   M   G K + ++Y++L+NG C+ K+++ AL+L+ + + KG KP V
Sbjct: 485 SKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDV 544

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             +N +  GL    +VE AL+L+ EM++ +   +  T+NT ++G  K      A +++  
Sbjct: 545 KMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDH 604

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           +     + DI +YN  + GLC   R+  A+        R ++   +T+NI++ G
Sbjct: 605 ILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQG 658



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 91/280 (32%), Positives = 150/280 (53%), Gaps = 13/280 (4%)

Query: 3   NGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC 62
           NG G++      +T  Y+++I+GLC+EG +D+   +  QM      P+    N++I+G  
Sbjct: 397 NGRGDL------DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFV 450

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
            A+   +A R F  M+ +G  P+VVT+N +++ L K  +  EA  L+  M+Q+  +PN  
Sbjct: 451 RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMI 510

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TYS LM+G C   K++ A  L+      G K D   +NI+I+G C + +VE+AL LY EM
Sbjct: 511 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 570

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
             +   P +VT+NTL  G +++   E A K+++ + +  +  D  +YN  + GLC    I
Sbjct: 571 KQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRI 630

Query: 243 VEAVELFRTL---GILKCELDIQAYNCLIDG-LCKSGRLE 278
            +AV         G+L   +    +N L+ G L   G +E
Sbjct: 631 SDAVGFLNDAVDRGVLPTAI---TWNILVQGYLALKGYME 667



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 151/302 (50%), Gaps = 4/302 (1%)

Query: 75  FEMMDQ--GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           F+ M +  G QP + ++N +++ L ++ K DEA           + PN  TY+ L+   C
Sbjct: 76  FQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISC 135

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              + ++A+EL   M   G   D  SY  LIN   KN  + +AL L+ EM  +G+ P V 
Sbjct: 136 RKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVA 195

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQR-DDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            YN L  G F+   + +A +++E + +   V  +  +YN  I+GLCK G   E+ E++  
Sbjct: 196 CYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHR 255

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +   D+  Y+ LI GLC SG L+ A  +++ +    +  DVV YN M++G    G+
Sbjct: 256 MKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 315

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++  +L+  ME+      V+ +  LI G     K  + I +   + EK    D+    +
Sbjct: 316 IEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGV 374

Query: 372 VV 373
           +V
Sbjct: 375 LV 376



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 126/260 (48%), Gaps = 37/260 (14%)

Query: 138 NRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           ++A ++F  M E  GC+    SYN L+N   ++ + +EA S +    + G+ P + TYN 
Sbjct: 70  DQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNI 129

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L        Q + A +L   M     + D  +Y T I+ L KNGY+ +A++LF  +    
Sbjct: 130 LIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERG 189

Query: 257 CELDIQAYNCLID------------------------------------GLCKSGRLEIA 280
              D+  YN LID                                    GLCK G+ + +
Sbjct: 190 VTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDES 249

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            E++  + +     D+ TY+ +IHGLC  G +D A  ++ +M EN V+P+V+++ T+++G
Sbjct: 250 FEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNG 309

Query: 341 FVRINKPSKVIELLHKMKEK 360
           ++R  +  + +EL   M+++
Sbjct: 310 YLRAGRIEECLELWKVMEKE 329


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 205/405 (50%), Gaps = 36/405 (8%)

Query: 6   GEI-GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           GE+ G  C+P+ VTYN +++  CK G +++A + F +MK E +  +VVT+++ +   C  
Sbjct: 253 GEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKN 312

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
               EA +LF +M  +G++P+ VT+  ++D  CK G++D+A  L + MVQ+ V  N  TY
Sbjct: 313 GMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTY 372

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + L+DG C  GK+  AE++F  ME  G + +++ Y  LI+G+   K  E ALSL  EM  
Sbjct: 373 TVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKD 432

Query: 185 KGIKPTVVTYNTLFLGL-----------------------------------FEIHQVEH 209
           KG++  V  Y  L  GL                                   F+  +   
Sbjct: 433 KGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESE 492

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           A+ L ++M       +  TY   +DGLCK G I EA+  F  +  L  E ++QAY  L+D
Sbjct: 493 AIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVD 552

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           GLCK+GRL+ A+ L   +  + +  D V    ++ G    G +  A  L   M  + +  
Sbjct: 553 GLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQL 612

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           ++  +   + GF  +N   +  E+L +M E  + PDA + + +++
Sbjct: 613 DLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLIN 657



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 187/366 (51%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
            + C P+ VTYN++IDG  K G +++ + L  +M+G    PDVVTYN+L++  C      
Sbjct: 222 AIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRME 281

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A   F EM  +GV  +VVTF+  +D  CKNG + EA +L   M  + ++PN  TY+ L+
Sbjct: 282 RAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLV 341

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C  G+++ A  L   M   G   + V+Y +L++G CK  +V EA  ++R M   GI+
Sbjct: 342 DGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIR 401

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
              + Y TL  G F     E AL L  EM+   +  D S Y   I GLC    + EA  L
Sbjct: 402 ANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSL 461

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +     + +   Y  ++D   K+ +   A+ L + +       ++VTY  ++ GLC 
Sbjct: 462 LNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCK 521

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G +D+A   F  M +  + PNV  +  L+ G  +  +  K + LL +M +K +  D  +
Sbjct: 522 AGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVV 581

Query: 369 VSMVVD 374
            + ++D
Sbjct: 582 CTSLMD 587



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 186/364 (51%), Gaps = 10/364 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNT T N I+  L +E   + A  LF Q+      P+V T+N +I  LC   D  EA+ L
Sbjct: 161 PNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNIMIDFLCKEGDLAEARAL 216

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   G  P VVT+N ++D   K G+++E  +L+  M     RP+  TY+ L++ FC 
Sbjct: 217 LARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCK 276

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++ RA   F  M+  G   + V+++  ++ +CKN  V EA+ L+ +M  KG+KP  VT
Sbjct: 277 FGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVT 336

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           Y  L  G  +  +++ AL L  EM +  V  +  TY   +DGLCK G + EA ++FR + 
Sbjct: 337 YTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLME 396

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             GI   EL    Y  LI G       E AL L   +  + +  DV  Y  +I GLCN  
Sbjct: 397 RAGIRANEL---LYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQ 453

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++D+A  L   M+E  + PN +I+  ++    +  K S+ I LL KM +    P+     
Sbjct: 454 KLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYC 513

Query: 371 MVVD 374
            +VD
Sbjct: 514 ALVD 517



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 103/292 (35%), Positives = 165/292 (56%), Gaps = 4/292 (1%)

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
           V P+  T N I+  L +    + A RL + +      PN FT++ ++D  C  G +  A 
Sbjct: 159 VPPNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNIMIDFLCKEGDLAEAR 214

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
            L   M+++GC  D V+YN LI+GY K  E+EE   L  EM   G +P VVTYN L    
Sbjct: 215 ALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCF 274

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
            +  ++E A   F EM+R+ V A+  T++TF+D  CKNG + EA++LF  + +   + + 
Sbjct: 275 CKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNE 334

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
             Y CL+DG CK+GRL+ AL L   + ++ +  +VVTY +++ GLC +G++ +A D+F  
Sbjct: 335 VTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRL 394

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           ME   +  N +++ TLIHG        + + LL +MK+K +  D S+   ++
Sbjct: 395 MERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALI 446



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 88/172 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY  ++DGLCK G +D+A + F +M    + P+V  Y +L+ GLC     ++A  
Sbjct: 506 RPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVL 565

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+D+G+    V    +MD   K G + +A  L   M+   ++ + + Y+  + GFC
Sbjct: 566 LLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFC 625

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
               I  A E+   M   G   D V YN LIN   K   +EEA  L  EM S
Sbjct: 626 NLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEMES 677



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 1/147 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN   Y  ++DGLCK G +DKA  L  +M  + ++ D V   SL+ G     +  +A  
Sbjct: 541 EPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFA 600

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M++ G+Q  +  +   +   C    + EA  +L  M++  + P+A  Y+ L++   
Sbjct: 601 LKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQ 660

Query: 133 LTGKINRAEELFGSMES-MGCKHDDVS 158
             G +  A  L   MES + C + D +
Sbjct: 661 KLGNMEEAAILQNEMESLLSCTNADAA 687



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 10/176 (5%)

Query: 205 HQVEHALKLFEEMQRDDVA------ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
           H    A  L + + R  +A      A  S  +T +  L   G + +AV     +  L+  
Sbjct: 101 HHPHLAASLVDLLHRAALALGPRRSALPSVVDTLLSLLADRGLLDDAVLALARVRELRVP 160

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            + +  N ++  L +    E+A  LF  LP      +V T+NIMI  LC +G + +A  L
Sbjct: 161 PNTRTCNHILLCLARERSSELAWRLFEQLP----APNVFTFNIMIDFLCKEGDLAEARAL 216

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
              M+    +P+V+ + +LI G+ +  +  +V +L+ +M+     PD    + +V+
Sbjct: 217 LARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVN 272


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 114/332 (34%), Positives = 175/332 (52%), Gaps = 3/332 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDK---AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           P+  TYN++IDG CK+G          L  +M    I+P  VT+  LI+G C  ++   A
Sbjct: 224 PSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAA 283

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            R+F EM  QG+  SVVT+N ++  LC  GK++E  +L++ M    + PN  T+  ++ G
Sbjct: 284 VRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKG 343

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC  G +  A +    M     + D V YNILI+ Y +  ++E+A+++   M  KGI P 
Sbjct: 344 FCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPN 403

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V TYN L  G         A  L +EM+   + AD  TYN  I  LC  G + +AV+L  
Sbjct: 404 VTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLD 463

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +  +  E +   YN +I G C  G ++ A E+   + +    A+VVTYN+ I   C  G
Sbjct: 464 EMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIG 523

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           +MD+A+DL  +M +  + PN I + T+  G +
Sbjct: 524 KMDEANDLLNEMLDKCLVPNGITYETIKEGMM 555



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 184/356 (51%), Gaps = 3/356 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH---ANDWNEA 70
           P+  T+NT+I GLC+ G + KA  +   +K   + P V TYNSLI G C    A +    
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             L  EM++ G+ P+ VTF V+++  CKN     A R+ + M Q+ +  +  TY++L+ G
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  GK+    +L   ME +G   +++++  ++ G+CK   + +A      M  + ++P 
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VV YN L      + ++E A+ + E M +  ++ + +TYN  I G  ++G    A  L  
Sbjct: 369 VVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +     E D+  YN LI  LC  G +  A++L   +    L  + +TYN +I G C+ G
Sbjct: 429 EMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            +  A+++   ME+     NV+ +   I  F +I K  +  +LL++M +K ++P+ 
Sbjct: 489 NIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNG 544



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 169/350 (48%), Gaps = 3/350 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+T + N ++ GL     VD A+  F       ++PD+ T+N++I GLC      +A  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKN---GKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           +  ++   G+ PSV T+N ++D  CK    G M     LL  MV+  + P A T+  L++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+C       A  +F  M+  G     V+YN LI+G C   +VEE + L  EM   G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             +T+  +  G  +   +  A    + M   +V  D   YN  ID   + G + +A+ + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +       ++  YNCLI G  +SG    A  L   +  + + ADVVTYN++I  LC  
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           G++ KA  L  +M E  + PN + + T+I GF          E+  +M++
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 151/297 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VT+  +I+G CK      A  +F +MK + I   VVTYNSLI GLC      E  +L
Sbjct: 262 PTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKL 321

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM D G+ P+ +TF  ++   CK G M +A+  +D M +R+V P+   Y+ L+D +  
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRR 381

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A  +  +M   G   +  +YN LI G+ ++ +   A  L  EM  KGI+  VVT
Sbjct: 382 LGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVT 441

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L   L    +V  A+KL +EM    +  +  TYNT I G C  G I  A E+   + 
Sbjct: 442 YNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRME 501

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             +   ++  YN  I   C+ G+++ A +L   +  + LV + +TY  +  G+   G
Sbjct: 502 KCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 149/297 (50%), Gaps = 3/297 (1%)

Query: 83  QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEE 142
           +PS  + N ++  L    ++D A +     ++R V P+ +T++T++ G C  G++ +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 143 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS---LYREMVSKGIKPTVVTYNTLFL 199
           +   +++ G      +YN LI+GYCK            L +EMV  GI PT VT+  L  
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           G  +      A+++FEEM++  +AA   TYN+ I GLC  G + E V+L   +  L    
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           +   + C++ G CK G +  A +    +  R +  DVV YNI+I      G+M+ A  + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             M +  ++PNV  +  LI GF R         LL +MKEK +  D    ++++  L
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 112/191 (58%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V YN +ID   + G ++ A A+   M  + I+P+V TYN LI G   + DW  A  
Sbjct: 366 EPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASG 425

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM ++G++  VVT+NV++  LC  G++ +A +LLD M +  + PN  TY+T++ GFC
Sbjct: 426 LLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFC 485

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G I  A E+   ME    + + V+YN+ I  +C+  +++EA  L  EM+ K + P  +
Sbjct: 486 DKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGI 545

Query: 193 TYNTLFLGLFE 203
           TY T+  G+ E
Sbjct: 546 TYETIKEGMME 556



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 2/94 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+G+  +PN +TYNTII G C +G +  A  +  +M+      +VVTYN  I   C    
Sbjct: 467 EVGL--EPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGK 524

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
            +EA  L  EM+D+ + P+ +T+  I + + + G
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 114/332 (34%), Positives = 175/332 (52%), Gaps = 3/332 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDK---AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           P+  TYN++IDG CK+G          L  +M    I+P  VT+  LI+G C  ++   A
Sbjct: 224 PSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAA 283

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            R+F EM  QG+  SVVT+N ++  LC  GK++E  +L++ M    + PN  T+  ++ G
Sbjct: 284 VRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKG 343

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC  G +  A +    M     + D V YNILI+ Y +  ++E+A+++   M  KGI P 
Sbjct: 344 FCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPN 403

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V TYN L  G         A  L +EM+   + AD  TYN  I  LC  G + +AV+L  
Sbjct: 404 VTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLD 463

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +  +  E +   YN +I G C  G ++ A E+   + +    A+VVTYN+ I   C  G
Sbjct: 464 EMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIG 523

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           +MD+A+DL  +M +  + PN I + T+  G +
Sbjct: 524 KMDEANDLLNEMLDKCLVPNGITYETIKEGMM 555



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 184/356 (51%), Gaps = 3/356 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH---ANDWNEA 70
           P+  T+NT+I GLC+ G + KA  +   +K   + P V TYNSLI G C    A +    
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             L  EM++ G+ P+ VTF V+++  CKN     A R+ + M Q+ +  +  TY++L+ G
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  GK+    +L   ME +G   +++++  ++ G+CK   + +A      M  + ++P 
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VV YN L      + ++E A+ + E M +  ++ + +TYN  I G  ++G    A  L  
Sbjct: 369 VVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +     E D+  YN LI  LC  G +  A++L   +    L  + +TYN +I G C+ G
Sbjct: 429 EMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            +  A+++   ME+     NV+ +   I  F +I K  +  +LL++M +K ++P+ 
Sbjct: 489 NIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNG 544



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 169/350 (48%), Gaps = 3/350 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+T + N ++ GL     VD A+  F       ++PD+ T+N++I GLC      +A  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKN---GKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           +  ++   G+ PSV T+N ++D  CK    G M     LL  MV+  + P A T+  L++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+C       A  +F  M+  G     V+YN LI+G C   +VEE + L  EM   G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             +T+  +  G  +   +  A    + M   +V  D   YN  ID   + G + +A+ + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +       ++  YNCLI G  +SG    A  L   +  + + ADVVTYN++I  LC  
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           G++ KA  L  +M E  + PN + + T+I GF          E+  +M++
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 151/297 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VT+  +I+G CK      A  +F +MK + I   VVTYNSLI GLC      E  +L
Sbjct: 262 PTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKL 321

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM D G+ P+ +TF  ++   CK G M +A+  +D M +R+V P+   Y+ L+D +  
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRR 381

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A  +  +M   G   +  +YN LI G+ ++ +   A  L  EM  KGI+  VVT
Sbjct: 382 LGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVT 441

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L   L    +V  A+KL +EM    +  +  TYNT I G C  G I  A E+   + 
Sbjct: 442 YNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRME 501

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             +   ++  YN  I   C+ G+++ A +L   +  + LV + +TY  +  G+   G
Sbjct: 502 KCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 149/297 (50%), Gaps = 3/297 (1%)

Query: 83  QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEE 142
           +PS  + N ++  L    ++D A +     ++R V P+ +T++T++ G C  G++ +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 143 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS---LYREMVSKGIKPTVVTYNTLFL 199
           +   +++ G      +YN LI+GYCK            L +EMV  GI PT VT+  L  
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           G  +      A+++FEEM++  +AA   TYN+ I GLC  G + E V+L   +  L    
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           +   + C++ G CK G +  A +    +  R +  DVV YNI+I      G+M+ A  + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             M +  ++PNV  +  LI GF R         LL +MKEK +  D    ++++  L
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 112/191 (58%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V YN +ID   + G ++ A A+   M  + I+P+V TYN LI G   + DW  A  
Sbjct: 366 EPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASG 425

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM ++G++  VVT+NV++  LC  G++ +A +LLD M +  + PN  TY+T++ GFC
Sbjct: 426 LLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFC 485

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G I  A E+   ME    + + V+YN+ I  +C+  +++EA  L  EM+ K + P  +
Sbjct: 486 DKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGI 545

Query: 193 TYNTLFLGLFE 203
           TY T+  G+ E
Sbjct: 546 TYETIKEGMME 556



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 2/94 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+G+  +PN +TYNTII G C +G +  A  +  +M+      +VVTYN  I   C    
Sbjct: 467 EVGL--EPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGK 524

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
            +EA  L  EM+D+ + P+ +T+  I + + + G
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/383 (33%), Positives = 191/383 (49%), Gaps = 36/383 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENI-NPDVVTYNSLIHGLCHANDWNEAK 71
           +P+  TYN +  GLC+ G VD+A  L  +M+   I +PDVVTYN+L+         ++A 
Sbjct: 311 EPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDAL 370

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM ++GV+ S+VT N+I+  LC+ G+++EA   L++M +  + P+  TY+TL+D  
Sbjct: 371 NLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDAS 430

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + +A  L   M   G K D  + N L+   CK K  EEA  L R    +G  P  
Sbjct: 431 CKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDE 490

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+Y T+    F+ ++ E AL L++EM +  +    STYNT I GL   G + EA++    
Sbjct: 491 VSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNE 550

Query: 252 LGILKCELD-------IQAY----------------------------NCLIDGLCKSGR 276
           L  +    D       I AY                            N L++GLC  GR
Sbjct: 551 LMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGR 610

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           LE A++LF S   +    DV+TYN +I  LC D  +D A   F DME   + P+V  +  
Sbjct: 611 LEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNV 670

Query: 337 LIHGFVRINKPSKVIELLHKMKE 359
           L+       +  +  ++LHK+ E
Sbjct: 671 LLSALSEAGRSVEAQKMLHKLNE 693



 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 195/367 (53%), Gaps = 1/367 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           I +   PN  T+N ++   C +G +  A +   +M+G  ++PD VTYN+L++  C     
Sbjct: 201 IALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGML 260

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA+ L   M  +G+ P+  T+N ++    + G + +A+ +++ M      P+ +TY+ L
Sbjct: 261 GEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVL 320

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDD-VSYNILINGYCKNKEVEEALSLYREMVSKG 186
             G C  GK++ A +L   ME +G    D V+YN L++   K +   +AL+L  EM  KG
Sbjct: 321 AAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKG 380

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +K ++VT+N +  GL    Q+E AL   E M  + +  D  TYNT ID  CK G + +A 
Sbjct: 381 VKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAF 440

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            L   +     ++D    N L+  LCK  R E A EL R+ P+R  V D V+Y  ++   
Sbjct: 441 VLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAY 500

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             + + + A  L+ +M +  + P++  + TLI G   + K ++ I+ L+++ E  ++PD 
Sbjct: 501 FKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDD 560

Query: 367 SIVSMVV 373
           +  ++++
Sbjct: 561 TTYNIII 567



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 177/364 (48%), Gaps = 3/364 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKAL--FLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +P+    N ++  L +        +L  F  +    ++P+  T+N L+H  C      +A
Sbjct: 169 RPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADA 228

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
                +M   G+ P  VT+N +++  C+ G + EA  LL  M +  + P   TY+TL+  
Sbjct: 229 LSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSA 288

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI-KP 189
           +   G I +A ++  +M + G + D  +YN+L  G C+  +V+EA  L  EM   GI  P
Sbjct: 289 YARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSP 348

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VVTYNTL    F+  +   AL L EEM+   V +   T+N  + GLC+ G + EA+   
Sbjct: 349 DVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRL 408

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +       D+  YN LID  CK+G +  A  L   + R  L  D  T N +++ LC +
Sbjct: 409 EMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKE 468

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            + ++A +L     +    P+ + + T++  + +  KP   + L  +M ++K+ P  S  
Sbjct: 469 KRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTY 528

Query: 370 SMVV 373
           + ++
Sbjct: 529 NTLI 532



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 172/354 (48%), Gaps = 36/354 (10%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           ++G+V  P+ VTYNT++D   K      A  L  +M+ + +   +VT+N ++ GLC    
Sbjct: 342 QLGIV-SPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQ 400

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             EA      M ++G+ P V+T+N ++D  CK G + +A  L+D MV+  ++ + FT +T
Sbjct: 401 LEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNT 460

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+   C   +   AEEL  +    G   D+VSY  ++  Y K  + E AL L+ EM+ + 
Sbjct: 461 LLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRK 520

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN---------------- 230
           + P++ TYNTL  GL  + ++  A+    E+    +  D +TYN                
Sbjct: 521 LTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAF 580

Query: 231 -------------------TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
                              T ++GLC  G + +A++LF +      ++D+  YN LI  L
Sbjct: 581 QFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQAL 640

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
           CK   ++ AL  F  +  R L  DV TYN+++  L   G+  +A  +   + E+
Sbjct: 641 CKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNES 694



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 152/302 (50%), Gaps = 17/302 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+Y T++    KE   + A  L+ +M    + P + TYN+LI GL       EA   
Sbjct: 488 PDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDK 547

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             E+M+ G+ P   T+N+I+   CK G +++A +  + MV+   +P+  T +TLM+G CL
Sbjct: 548 LNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCL 607

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++ +A +LF S    G K D ++YN LI   CK+ +V+ AL  + +M  +G++P V T
Sbjct: 608 YGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFT 667

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL----- 248
           YN L   L E  +   A K+  ++           Y  F     K+   VEAVE      
Sbjct: 668 YNVLLSALSEAGRSVEAQKMLHKLNESG-----KLYGRFFYPSIKSS--VEAVETGKDPE 720

Query: 249 ----FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
                 ++G  + + D ++YN  I  LC  G+L+ A  +   + ++ +  D  TY  ++ 
Sbjct: 721 VKSDIESVGNTQGD-DQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLME 779

Query: 305 GL 306
           GL
Sbjct: 780 GL 781



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 125/274 (45%), Gaps = 21/274 (7%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYNT+I GL   G + +A     ++    + PD  TYN +IH  C   D  +A + 
Sbjct: 523 PSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQF 582

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M++   +P VVT N +M+ LC  G++++A +L +  V++  + +  TY+TL+   C 
Sbjct: 583 HNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCK 642

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              ++ A   F  ME  G + D  +YN+L++   +     EA  +  ++   G       
Sbjct: 643 DNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGK------ 696

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAA-----------DTSTYNTFIDGLCKNGYI 242
                 G F    ++ +++  E  +  +V +           D  +YN +I  LC  G +
Sbjct: 697 ----LYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQL 752

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
            EA  +   +      +D   Y  L++GL K  +
Sbjct: 753 KEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQK 786



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 7/195 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VT NT+++GLC  G ++KA  LF     +    DV+TYN+LI  LC  ND + A R
Sbjct: 592 KPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALR 651

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF- 131
            F +M  +G+QP V T+NV++  L + G+  EA ++L  + +       F Y ++     
Sbjct: 652 FFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVE 711

Query: 132 -CLTGKINRAEELFGSMESMGCKH--DDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
              TGK     E+   +ES+G     D  SYN  I   C   +++EA ++  EM+ KG+ 
Sbjct: 712 AVETGK---DPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMS 768

Query: 189 PTVVTYNTLFLGLFE 203
               TY TL  GL +
Sbjct: 769 VDNSTYITLMEGLIK 783


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 197/364 (54%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC P    ++ +   L +E   ++A   F +MK   + P   + N L+H        +  
Sbjct: 58  VCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGM 117

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           KR F +M+  G +P+V T+N+++D +CK G ++ AS L + M  R + P+  TY++++DG
Sbjct: 118 KRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDG 177

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G+++     F  M+SM C+ D ++YN LIN +CK  ++ + L  +REM   G+KP 
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPN 237

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VV+Y+TL     +   ++ ALK + +M+R  +  +  TY + +D  CK G + +A  L  
Sbjct: 238 VVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLAD 297

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +  +  E ++  Y  LIDGLC   R++ A ELF  +    ++ ++ +Y  +IHG     
Sbjct: 298 EMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAK 357

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            MD+A +L  +M+   + P+++++ T I     + K      ++++M+EK +  +  I +
Sbjct: 358 NMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYT 417

Query: 371 MVVD 374
            ++D
Sbjct: 418 TLMD 421



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/349 (33%), Positives = 183/349 (52%), Gaps = 1/349 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ +TYNT+I+  CK G + K    F +MK   + P+VV+Y++L+   C  +   +A 
Sbjct: 199 CEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAL 258

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           + + +M   G+ P+  T+  ++D  CK G + +A RL D M Q  V  N  TY+ L+DG 
Sbjct: 259 KFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGL 318

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +I  AEELFG M + G   +  SY  LI+G+ K K ++ AL L  EM  +GIKP +
Sbjct: 319 CDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDL 378

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           + Y T    L  + ++E A  +  EMQ   + A+T  Y T +D   K+    E + L   
Sbjct: 379 LLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEE 438

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV-LVADVVTYNIMIHGLCNDG 310
           +  L  E+    +  LIDGLCK+  +  A++ F  +     L A+   Y  MI GLC + 
Sbjct: 439 MLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKED 498

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           Q++ A  LF  M +  + P+   + +LI G ++     + + L  KM E
Sbjct: 499 QVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAE 547



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 165/335 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P T + N ++    + G  D  K  F  M G    P V TYN +I  +C   D   A  L
Sbjct: 96  PKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGL 155

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM  +G+ P  VT+N ++D   K G++D+     + M      P+  TY+TL++ FC 
Sbjct: 156 FEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCK 215

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+ +  E F  M+  G K + VSY+ L++ +CK   +++AL  Y +M   G+ P   T
Sbjct: 216 FGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHT 275

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +L     +I  +  A +L +EM +  V  +  TY   IDGLC    I EA ELF  + 
Sbjct: 276 YTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMV 335

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 ++ +Y  LI G  K+  ++ ALEL   +  R +  D++ Y   I  LC   +++
Sbjct: 336 TAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIE 395

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
            A  +  +M+E  +  N  I+ TL+  + +   PS
Sbjct: 396 AAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPS 430



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 187/403 (46%), Gaps = 36/403 (8%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           IG   KP   TYN +ID +CKEG ++ A  LF +MK   + PD VTYNS+I G       
Sbjct: 125 IGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRL 184

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++    F EM     +P V+T+N +++  CK GK+ +       M Q  ++PN  +YSTL
Sbjct: 185 DDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTL 244

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D FC    + +A + +  M  +G   ++ +Y  L++ YCK   + +A  L  EM   G+
Sbjct: 245 VDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGV 304

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +  VVTY  L  GL ++ +++ A +LF +M    V  + ++Y   I G  K   +  A+E
Sbjct: 305 EWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALE 364

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD------------ 295
           L   +     + D+  Y   I  LC   ++E A  +   +  + + A+            
Sbjct: 365 LLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYF 424

Query: 296 -----------------------VVTYNIMIHGLCNDGQMDKAHDLFLDMEEN-AVAPNV 331
                                   VT+ ++I GLC +  + KA D F  +  +  +  N 
Sbjct: 425 KSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANA 484

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            I+  +I G  + ++      L  +M +K ++PD +  + ++D
Sbjct: 485 AIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLID 527



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 91/211 (43%), Gaps = 36/211 (17%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  +Y  +I G  K   +D+A  L  +MKG  I PD++ Y + I  LC       AK +
Sbjct: 341 PNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVV 400

Query: 74  FFEMMDQGVQ------------------PS-----------------VVTFNVIMDELCK 98
             EM ++G++                  PS                  VTF V++D LCK
Sbjct: 401 MNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCK 460

Query: 99  NGKMDEASRLLDLMVQR-DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           N  + +A      +     ++ NA  Y+ ++DG C   ++  A  LF  M   G   D  
Sbjct: 461 NKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRT 520

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +Y  LI+G  K   V +AL+L  +M   G++
Sbjct: 521 AYTSLIDGKLKQGNVVQALALRDKMAEIGVE 551



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 1/107 (0%)

Query: 16  TVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEAKRLF 74
            VT+  +IDGLCK   V KA   F ++  +  +  +   Y ++I GLC  +    A  LF
Sbjct: 448 AVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLF 507

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNA 121
            +M  +G+ P    +  ++D   K G + +A  L D M +  V   A
Sbjct: 508 EQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVESGA 554



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + N   Y  +IDGLCKE  V+ A  LF QM  + + PD   Y SLI G     +  +A  
Sbjct: 481 QANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALA 540

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKN 99
           L  +M + GV+ S   F     +LC+N
Sbjct: 541 LRDKMAEIGVE-SGARFG----DLCQN 562


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 199/397 (50%), Gaps = 35/397 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VT++T+ID  CKEG +DKA  LF  M G  + PD++ Y+ LI GL  A    + +R
Sbjct: 304 KPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQR 363

Query: 73  LFF-----------------------------------EMMDQGVQPSVVTFNVIMDELC 97
           L                                      M+++G+ P+VV+ ++++   C
Sbjct: 364 LLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFC 423

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           +NG++ EA  L   +++    P+  TYS L+ GFC +G +     L+  M    C+ D +
Sbjct: 424 QNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTI 483

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            Y++LING CK   V +AL  + + V++G+ P V T NTL      +  +  A+K++  M
Sbjct: 484 VYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLM 543

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
              ++ ADT TY   I G  + G + EA+ LF  +     + D+  Y  LIDGLCK  + 
Sbjct: 544 GMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKS 603

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
              L +F  + +  +  D+  YN++I+    +G ++ A  LF+ + E    P+V  F T+
Sbjct: 604 SAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTM 663

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           I  +    +    ++L  KM  +++ P+A   ++++D
Sbjct: 664 ICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILID 700



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 188/355 (52%), Gaps = 1/355 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+T+ Y+ +I+GLCK+G V  A   F Q     ++P+V T N+L+   C       A 
Sbjct: 478 CEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAM 537

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++++ M    ++   VT+ +++    + G++DEA  L   M+++D +P+  TY TL+DG 
Sbjct: 538 KVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGL 597

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K +    +F  M       D   YN+LIN + +   +E AL L+  +V +G KP V
Sbjct: 598 CKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDV 657

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+NT+        +++ A++LF +M  + +  +  T+   ID  C+ G + +A+ +F  
Sbjct: 658 FTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSK 717

Query: 252 LGILKCELDIQAYNCLIDGLCKS-GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
           +     E ++  Y+CLI G  KS   +E  L+L+  +    +  ++V+Y+I+I GLC  G
Sbjct: 718 MLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRG 777

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            M +A   F    +  + P+VI +  LI G+ ++ + ++ + L   M   ++ PD
Sbjct: 778 LMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 191/361 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + +T N I+ G+  +  +  A   F  +      P+VVT+++LI   C   + ++A  LF
Sbjct: 271 DIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLF 330

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M   GV P ++ +++++D L K G++++  RLL + + + ++ +   +S+ MD +   
Sbjct: 331 DVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKI 390

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G + R  +++  M + G   + VS +ILI G+C+N  + EA  L+ +++  G +P+++TY
Sbjct: 391 GDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTY 450

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + L  G  +   +     L+E+M +     DT  Y+  I+GLCK G + +A+  F     
Sbjct: 451 SALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVN 510

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                ++   N L+D  C+   +  A++++  +    + AD VTY I+I G    G++D+
Sbjct: 511 RGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDE 570

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  LF  M +    P+VI + TLI G  ++ K S  + +   M +  V PD +I +++++
Sbjct: 571 ALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLIN 630

Query: 375 L 375
           +
Sbjct: 631 M 631



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 168/365 (46%), Gaps = 35/365 (9%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQ--MKGENINPDVV--TYNSLIHG---------- 60
           ++V Y  +I+  C++G  DK+  +F+   +KG  ++P+VV     SLI            
Sbjct: 166 HSVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKY 225

Query: 61  --LCHA-------------------NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKN 99
             LC A                    +     R    ++  G    ++T N I+  +   
Sbjct: 226 GELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQ 285

Query: 100 GKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
             +  A    +++V+   +PN  T+STL+D +C  G +++A  LF  M   G   D + Y
Sbjct: 286 NDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVY 345

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           +ILI+G  K   +E+   L    + KGIK  VV +++      +I  +   +++++ M  
Sbjct: 346 SILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLN 405

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
           + ++ +  + +  I G C+NG I+EA  LF  +  L  E  I  Y+ LI G CKSG L  
Sbjct: 406 EGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRD 465

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
              L+  + ++    D + Y+++I+GLC  G +  A   F       ++PNV    TL+ 
Sbjct: 466 GFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLD 525

Query: 340 GFVRI 344
            F R+
Sbjct: 526 SFCRL 530



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 98/186 (52%), Gaps = 1/186 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  T+NT+I   C    +D A  LF +M  E + P+ +T+  LI   C     ++A  
Sbjct: 654 KPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAML 713

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS-RLLDLMVQRDVRPNAFTYSTLMDGF 131
           +F +M+++G +P++VT++ ++    K+  M E+  +L + M++ ++ PN  +YS L+DG 
Sbjct: 714 MFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGL 773

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A   F          D ++Y ILI GYCK   + EA+ LY  M+   + P  
Sbjct: 774 CKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDR 833

Query: 192 VTYNTL 197
               TL
Sbjct: 834 FLERTL 839



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/258 (20%), Positives = 113/258 (43%)

Query: 116 DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
           D   ++  Y  L++ +C  G  +++ ++F  +   G         +L+     +  VE  
Sbjct: 162 DSTNHSVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVI 221

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
           +  Y E+ S   +     Y  +        +VE  L+  + + +     D  T N  + G
Sbjct: 222 VDKYGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKG 281

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           +     I  A + F  +  +  + ++  ++ LID  CK G L+ A  LF  +    +  D
Sbjct: 282 IWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPD 341

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           ++ Y+I+I GL   G+++    L L   +  +  +V+ F + +  +V+I    +VI++  
Sbjct: 342 LIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYK 401

Query: 356 KMKEKKVMPDASIVSMVV 373
           +M  + + P+    S+++
Sbjct: 402 RMLNEGISPNVVSCSILI 419



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 68/306 (22%), Positives = 113/306 (36%), Gaps = 60/306 (19%)

Query: 74  FFEMMDQG-VQP-SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           FFE  +   + P S  +F  ++  L +N     A+ + D  + +    +  T     DGF
Sbjct: 100 FFEWAESFFISPLSAPSFCALLHVLLQNQLFSRAACVFDKFIMQ-FGNDYDTLDAFRDGF 158

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI--KP 189
           C     N +                V Y  LI  YC+    ++++ ++  +  KGI   P
Sbjct: 159 CDLDSTNHS----------------VVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSP 202

Query: 190 TVVTYNTLFLG-LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
            VV    L LG L + H VE             V  D            K G +  A+  
Sbjct: 203 NVVY---LLLGSLIDSHCVE-------------VIVD------------KYGELCSAMR- 233

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
                    E     Y  +++     G +E+ L   ++L +     D++T N ++ G+  
Sbjct: 234 ---------EQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWM 284

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
              +  A D F  +      PNV+ F TLI  + +     K   L   M    V PD  +
Sbjct: 285 QNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIV 344

Query: 369 VSMVVD 374
            S+++D
Sbjct: 345 YSILID 350


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 197/389 (50%), Gaps = 37/389 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +T+N +I  +C+ G VDKA  +F ++   N  PD  TY++L+HGLC     +EA  L
Sbjct: 168 PNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSL 227

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G  P++V FNV++  LCK G +  A++L+D M  +   PN  TY+ L+ G CL
Sbjct: 228 LDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCL 287

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGY--------------------------- 166
            GK+ +A  L   M S  C  +DV++  LING+                           
Sbjct: 288 KGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYV 347

Query: 167 --------CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
                   CK  +  +A+ L++EMV KG  P  + Y+ L  GL    +++ A     EM+
Sbjct: 348 YSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMK 407

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                 ++ TY++ + G  + G   +A+ +++ +    C  +   Y+ LI+GLCK G+  
Sbjct: 408 NKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFM 467

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM--EENAVAPNVIIFVT 336
            AL +++ +  R +  DVV Y+ MIHG CN   +++   LF  M  +   V P+VI +  
Sbjct: 468 EALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNI 527

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           L++ F       + I++L+ M ++   PD
Sbjct: 528 LLNAFCIQKSIFRAIDILNIMLDQGCDPD 556



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 207/421 (49%), Gaps = 58/421 (13%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TY+T++ GLCKE  +D+A +L  +M+ E   P++V +N LI  LC   D   A 
Sbjct: 201 CAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAA 260

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ----------------- 114
           +L   M  +G  P+ VT+N ++  LC  GK+++A  LL+ MV                  
Sbjct: 261 KLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGF 320

Query: 115 ------------------RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
                             R  R N + YS+L+ G C  GK N+A EL+  M   GC  + 
Sbjct: 321 VMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNT 380

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           + Y+ LI+G C+  +++EA     EM +KG  P   TY++L  G FE      A+ +++E
Sbjct: 381 IVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKE 440

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M  ++   +   Y+  I+GLCK+G  +EA+ +++ +     +LD+ AY+ +I G C +  
Sbjct: 441 MANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANL 500

Query: 277 LEIALELFRSL--PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI-- 332
           +E  L+LF  +     V+  DV+TYNI+++  C    + +A D+   M +    P+ I  
Sbjct: 501 VEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITC 560

Query: 333 -IFVTLIHG---------------FVRINKPSKVI---ELLHKMKEKKVMPDASIVSMVV 373
            IF+  +                  VR+ K  + I   +++  M  K ++P AS  +MVV
Sbjct: 561 DIFLKTLRENMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVV 620

Query: 374 D 374
            
Sbjct: 621 Q 621



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 192/394 (48%), Gaps = 40/394 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALF---LQMKGENINPDVVTYNSLIHGLCHANDWN 68
           CK    ++N++++ + +EG  ++A   +   +  K  NI+P+ +T+N +I  +C     +
Sbjct: 128 CKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVD 187

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  +F E+  +   P   T++ +M  LCK  ++DEA  LLD M      PN   ++ L+
Sbjct: 188 KAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLI 247

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
              C  G + RA +L  +M   GC  ++V+YN L++G C   ++E+A+SL  +MVS    
Sbjct: 248 SALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCV 307

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  VT+ TL  G     +     ++   ++      +   Y++ I GLCK G   +A+EL
Sbjct: 308 PNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMEL 367

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLE------------------------------ 278
           ++ +    C  +   Y+ LIDGLC+ G+L+                              
Sbjct: 368 WKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFE 427

Query: 279 -----IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
                 A+ +++ +     + + V Y+I+I+GLC DG+  +A  ++  M    +  +V+ 
Sbjct: 428 AGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVA 487

Query: 334 FVTLIHGFVRINKPSKVIELLHKM--KEKKVMPD 365
           + ++IHGF   N   + ++L ++M  +   V PD
Sbjct: 488 YSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPD 521



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 131/263 (49%), Gaps = 23/263 (8%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G  C PNT+ Y+ +IDGLC+EG +D+A+    +MK +   P+  TY+SL+ G   A D 
Sbjct: 372 VGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDS 431

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  ++ EM +     + V ++++++ LCK+GK  EA  +   M+ R ++ +   YS++
Sbjct: 432 HKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSM 491

Query: 128 MDGFCLTGKINRAEELFGSMESMG--CKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           + GFC    + +  +LF  M   G   + D ++YNIL+N +C  K +  A+ +   M+ +
Sbjct: 492 IHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQ 551

Query: 186 GIKPTVVT---------------------YNTLFLGLFEIHQVEHALKLFEEMQRDDVAA 224
           G  P  +T                      + L + L +  +   A K+ E M    +  
Sbjct: 552 GCDPDFITCDIFLKTLRENMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLLP 611

Query: 225 DTSTYNTFIDGLCKNGYIVEAVE 247
             ST+   +  +CK   + +A+ 
Sbjct: 612 KASTWAMVVQQVCKPKNVRKAIS 634



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 129/257 (50%), Gaps = 3/257 (1%)

Query: 123 TYSTLMDGFCLTGKINRAEELFG---SMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           +++++++     G  NRA E +    + +S+    + +++N++I   C+   V++A+ ++
Sbjct: 134 SFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVF 193

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
           RE+  +   P   TY+TL  GL +  +++ A+ L +EMQ +    +   +N  I  LCK 
Sbjct: 194 REIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKK 253

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G +  A +L   + +  C  +   YN L+ GLC  G+LE A+ L   +     V + VT+
Sbjct: 254 GDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTF 313

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
             +I+G    G+      + + +E      N  ++ +LI G  +  K ++ +EL  +M  
Sbjct: 314 GTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVG 373

Query: 360 KKVMPDASIVSMVVDLL 376
           K   P+  + S ++D L
Sbjct: 374 KGCGPNTIVYSALIDGL 390



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/187 (21%), Positives = 87/187 (46%), Gaps = 8/187 (4%)

Query: 198 FLGLFEIHQVEHALKLFEE----MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF-RTL 252
           F  L E H      +  EE    M+R+        +        K     +AV+LF R  
Sbjct: 64  FYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKAYGKAHLPEKAVDLFHRMW 123

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV---ADVVTYNIMIHGLCND 309
           G  +C+  ++++N +++ + + G    ALE +  +     +    + +T+N++I  +C  
Sbjct: 124 GEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRL 183

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G +DKA ++F ++     AP+   + TL+HG  +  +  + + LL +M+ +   P+    
Sbjct: 184 GLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAF 243

Query: 370 SMVVDLL 376
           ++++  L
Sbjct: 244 NVLISAL 250


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 108/290 (37%), Positives = 164/290 (56%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           PD+ TYN+LI GLC       A+ L  EM  +G +P+V+T+ +++D  CK G+++EA  +
Sbjct: 12  PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 71

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
           LD M  + +  NA  Y+ L+   C   K+  A  +FG M S GCK D  ++N LI G CK
Sbjct: 72  LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 131

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             + EEAL LY++M+ +G+    +TYNTL         ++ ALKL  +M       D  T
Sbjct: 132 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 191

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           YN  I  LC+ G I + + LF  +       +  + N LI+GLC++G ++ ALE  R + 
Sbjct: 192 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 251

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            R L  D+VTYN +I+GLC  G+  +A +LF  ++   + P+ I + TLI
Sbjct: 252 HRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 301



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/339 (33%), Positives = 181/339 (53%), Gaps = 6/339 (1%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V C P+  TYNT+I GLCK+G++  A+ L  +M+ +   P+V+TY  LI   C     
Sbjct: 6   LSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRL 65

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA+ +  EM  +G+  + V +N ++  LCK+ K+ +A  +   M  +  +P+ FT+++L
Sbjct: 66  EEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSL 125

Query: 128 MDGFCLTGKINRAEELFGSMESM---GCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + G C   K+N+ EE  G  + M   G   + ++YN LI+ + +   ++EAL L  +M+ 
Sbjct: 126 IFGLC---KVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 182

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           +G     +TYN L   L     +E  L LFE+M    +  +  + N  I+GLC+ G I  
Sbjct: 183 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 242

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A+E  R +       DI  YN LI+GLCK+GR + AL LF  L    +  D +TYN +I 
Sbjct: 243 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 302

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
             C +G  D AH L     ++   PN + +  L+  F++
Sbjct: 303 WHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 341



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 165/291 (56%)

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
            M+  G  P + T+N ++  LCK G +  A  L++ M  +   PN  TY+ L+D FC  G
Sbjct: 4   SMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEG 63

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           ++  A  +   M   G   + V YN LI+  CK+++V++AL+++ +M SKG KP + T+N
Sbjct: 64  RLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFN 123

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           +L  GL ++++ E AL L+++M  + V A+T TYNT I    + G + EA++L   +   
Sbjct: 124 SLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFR 183

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
            C LD   YN LI  LC++G +E  L LF  +  + L  + ++ NI+I+GLC  G +  A
Sbjct: 184 GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHA 243

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            +   DM    + P+++ + +LI+G  +  +  + + L  K++ + + PDA
Sbjct: 244 LEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDA 294



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 92/180 (51%)

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           ++  M+S G  P + TYNTL LGL +   +  A +L  EMQ      +  TY   ID  C
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           K G + EA  +   +      L+   YNCLI  LCK  +++ AL +F  +  +    D+ 
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           T+N +I GLC   + ++A  L+ DM    V  N I + TLIH F+R     + ++L++ M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180


>gi|302776342|ref|XP_002971343.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
 gi|300161325|gb|EFJ27941.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
          Length = 584

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 193/368 (52%), Gaps = 8/368 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEA 70
           C+P+   Y  +IDG CKE  +D+A  L  +M+ E  I PDVV YNS++ GLC +N + EA
Sbjct: 162 CQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEA 221

Query: 71  KRLFFE-MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
            +   E M+ QG  P+VVT+  ++   CK  KM  A R+ + M++R ++P   +YS ++D
Sbjct: 222 WKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIID 281

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G    G++  A  +   ME++GC+ + V Y  LI+G CK+  +++A +LYR M   G  P
Sbjct: 282 GLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFP 341

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
              TY TL        + E AL LF+ + RD    D + Y   + GLC+   + +A  LF
Sbjct: 342 NQRTYATLIDTFCRNDRTETALGLFDHI-RDYCPLDVAMYTAVVSGLCRERRLDDARALF 400

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV-LVADVVTYNIMIHGLCN 308
           R + +     D  AYN L+ G  +S R E A  +   L      VA+++TYN +I G C 
Sbjct: 401 REMRLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELGDDPGCVANLLTYNTVIAGCC- 459

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
              ++    LF +M +  +AP+   +  LI   +   +  +  +L  +M    + P + +
Sbjct: 460 ---LESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIGRAFDLCEEMLASGLSPPSGV 516

Query: 369 VSMVVDLL 376
           +  VV  L
Sbjct: 517 LGRVVARL 524



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 185/350 (52%), Gaps = 6/350 (1%)

Query: 14  PNTVTYNTIIDGLCKEG-FVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           PN   + ++ID L K     D A+AL L M+   I+PDVVT+  +I G C       A  
Sbjct: 93  PNQHAFASLIDALSKSTRLADAARALEL-MRDAGIHPDVVTFTVMIRGFCKNRMMERAWE 151

Query: 73  LFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDVRPNAFTYSTLMDG 130
           +F EM+     QP    + V++D  CK  +MD A  LL ++ V+R ++P+   Y++++DG
Sbjct: 152 IFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDG 211

Query: 131 FCLTGKINRAEELFG-SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            C + +   A +    +M   GC    V+Y  LI G CK K+++ A+ ++  M+ + I+P
Sbjct: 212 LCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQP 271

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           T+V+Y+ +  GL +  +V  A ++  EM+      +   Y T IDGLCK+G++ +A  L+
Sbjct: 272 TIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALY 331

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           R +       + + Y  LID  C++ R E AL LF  + R     DV  Y  ++ GLC +
Sbjct: 332 RIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHI-RDYCPLDVAMYTAVVSGLCRE 390

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
            ++D A  LF +M    V+ +   +  L+HG  R  +P +   +L ++ +
Sbjct: 391 RRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELGD 440



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 169/331 (51%), Gaps = 7/331 (2%)

Query: 35  AKALFLQMK--GENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQP-SVVTFNV 91
           A A FL+ K    +I P  ++ + +I   C + D   A  +   M+  G  P +   F  
Sbjct: 42  AAARFLREKTAAGSIFPGFLS-SVVIDRACKSGDLRGALLILATMLHSGTPPPNQHAFAS 100

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM-ESM 150
           ++D L K+ ++ +A+R L+LM    + P+  T++ ++ GFC    + RA E+F  M +S 
Sbjct: 101 LIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQEMIKSN 160

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREM-VSKGIKPTVVTYNTLFLGLFEIHQVEH 209
            C+ D   Y +LI+GYCK   ++ AL L REM V + I+P VV YN++  GL   ++   
Sbjct: 161 RCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLE 220

Query: 210 ALKLFEE-MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLI 268
           A K  +E M     +    TY + I G CK   +  AV ++  +   K +  I +Y+ +I
Sbjct: 221 AWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIVSYSVII 280

Query: 269 DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVA 328
           DGL K+GR+  A  + R +       +VV Y  +I GLC  G +D A+ L+  M+ +   
Sbjct: 281 DGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAF 340

Query: 329 PNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           PN   + TLI  F R ++    + L   +++
Sbjct: 341 PNQRTYATLIDTFCRNDRTETALGLFDHIRD 371



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 169/351 (48%), Gaps = 6/351 (1%)

Query: 29  EGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG-VQPSVV 87
            GF        L  +  ++ P     ++ +  L  + D N A R   E    G + P  +
Sbjct: 2   RGFRRGLHRRSLYHRSLHLPPSPDAAHAQLLALHESGDANAAARFLREKTAAGSIFPGFL 61

Query: 88  TFNVIMDELCKNGKMDEASRLLDLMVQRDVRP-NAFTYSTLMDGFCLTGKINRAEELFGS 146
           + +V++D  CK+G +  A  +L  M+     P N   +++L+D    + ++  A      
Sbjct: 62  S-SVVIDRACKSGDLRGALLILATMLHSGTPPPNQHAFASLIDALSKSTRLADAARALEL 120

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV-SKGIKPTVVTYNTLFLGLFEIH 205
           M   G   D V++ ++I G+CKN+ +E A  +++EM+ S   +P    Y  L  G  +  
Sbjct: 121 MRDAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKEL 180

Query: 206 QVEHALKLFEEMQRDD-VAADTSTYNTFIDGLCKNGYIVEAVELF-RTLGILKCELDIQA 263
           +++ AL+L  EM+ +  +  D   YN+ +DGLC++   +EA +    T+ +  C   +  
Sbjct: 181 RMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVT 240

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
           Y  LI G CK+ ++++A+ ++ ++  R +   +V+Y+++I GL   G++  A+ +  +ME
Sbjct: 241 YTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREME 300

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
                 NV+I+ TLI G  +         L   MK     P+    + ++D
Sbjct: 301 TLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLID 351



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 12/230 (5%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N V Y T+IDGLCK GF+D A AL+  MK     P+  TY +LI   C  ND  E  
Sbjct: 304 CELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCR-NDRTETA 362

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
              F+ +       V  +  ++  LC+  ++D+A  L   M    V  +   Y+ L+ G 
Sbjct: 363 LGLFDHIRDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHG- 421

Query: 132 CLTGKINRAEELFGSMESMG----CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
               +  R EE F  +E +G    C  + ++YN +I G C    +E  + L+ EM  +GI
Sbjct: 422 --AFRSERPEEAFRILEELGDDPGCVANLLTYNTVIAGCC----LESGMVLFYEMRQRGI 475

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
            P   TY+ L   L    ++  A  L EEM    ++  +      +  LC
Sbjct: 476 APDFATYSALIDRLLGSGEIGRAFDLCEEMLASGLSPPSGVLGRVVARLC 525



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 4/105 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N +TYNT+I G C E        LF +M+   I PD  TY++LI  L  + +   A 
Sbjct: 444 CVANLLTYNTVIAGCCLE----SGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIGRAF 499

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
            L  EM+  G+ P       ++  LC + + D A++++++ +  D
Sbjct: 500 DLCEEMLASGLSPPSGVLGRVVARLCWSRRGDLAAKVIEMAMAVD 544


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 191/361 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +YNT+I G   EG ++ A  +F QM  +++ P V TY +LI G C     +EA+R+
Sbjct: 332 PDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRV 391

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            +EM   GV+PS +T++ +++  CK+ K+  A  L+  +  R +  N   Y+ L+DGFC 
Sbjct: 392 LYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQ 451

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++++A+++   M + G   D ++Y+ LING CK   + E   +   M   G+ P  V 
Sbjct: 452 LGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVL 511

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL     +    + ALK F ++ R  + A++  +N  +    + G I EA +  + + 
Sbjct: 512 YTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMS 571

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +K   D+ ++NC+ID  C+ G +  A  ++ ++ R     D+ TY  ++ GLC  G + 
Sbjct: 572 RMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLV 631

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A +  + + E A A +     TL+ G  +     + ++L  KM  + ++PD    ++++
Sbjct: 632 QAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILL 691

Query: 374 D 374
           D
Sbjct: 692 D 692



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 186/387 (48%), Gaps = 36/387 (9%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N   Y  +IDG C+ G V KAK +   M  + I+PDV+TY++LI+G+C     +E K + 
Sbjct: 438 NRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEIL 497

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M   GV P+ V +  ++   CK G   EA +    + +  +  N+  ++ L+  F   
Sbjct: 498 SRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYRE 557

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G I  AE+    M  M    D  S+N +I+ YC+   V EA S+Y  MV  G  P + TY
Sbjct: 558 GMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTY 617

Query: 195 -----------------------------------NTLFLGLFEIHQVEHALKLFEEMQR 219
                                              NTL +G+ +   ++ AL L E+M  
Sbjct: 618 GSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVT 677

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
            ++  DT TY   +DG CK G +V A+ L + +       D  AY CL++GL   G+++ 
Sbjct: 678 RNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKA 737

Query: 280 ALELFRS-LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           A  +F+  + +  L AD + YN M++G    GQ+++   L  +M EN V P+   +  L+
Sbjct: 738 ASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILM 797

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPD 365
           HG+++  + S+ + L   M ++ + PD
Sbjct: 798 HGYIKKGQLSRTLYLYRDMVKEGIKPD 824



 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 188/375 (50%), Gaps = 23/375 (6%)

Query: 11   VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
             C  +  T NT++ G+CK G +D+A  L  +M   NI PD  TY  L+ G C       A
Sbjct: 644  ACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPA 703

Query: 71   KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDVRPNAFTYSTLMD 129
              L   M+++G+ P  + +  +++ L   G++  AS +  +++ +  +  +   Y+++M+
Sbjct: 704  LILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMN 763

Query: 130  GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            G+   G+IN  E L  +M          SYNIL++GY K  ++   L LYR+MV +GIKP
Sbjct: 764  GYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKP 823

Query: 190  TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
              VTY  L  GL E   +E A+K  E+M  + V  D   ++  I    +   +  A++LF
Sbjct: 824  DNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLF 883

Query: 250  -------------------RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
                               + LG++  E+   A + ++ GLCK G++E A+ +F S+ R 
Sbjct: 884  SYMKWVGDIDGAFELKEDMKALGVVPSEV---AESSIVRGLCKCGKVEEAIIVFSSIMRA 940

Query: 291  VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
             +V  + T+  ++HGLC + ++D A  L   ME   +  +V+ +  LI G          
Sbjct: 941  GMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDA 1000

Query: 351  IELLHKMKEKKVMPD 365
            ++L  +MK K ++P+
Sbjct: 1001 LDLYEEMKSKGLLPN 1015



 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 187/369 (50%), Gaps = 17/369 (4%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P+T TY  ++DG CK G V  A  L   M  + + PD + Y  L++GL +      A  +
Sbjct: 682  PDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYM 741

Query: 74   FFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F E++  +G+    + +N +M+   K G+++E  RL+  M + +V P++ +Y+ LM G+ 
Sbjct: 742  FQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYI 801

Query: 133  LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              G+++R   L+  M   G K D+V+Y +LI G C+   +E A+    +MV +G+ P  +
Sbjct: 802  KKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNL 861

Query: 193  TYNTLFLGLFEIHQVEHALKLF----------------EEMQRDDVAADTSTYNTFIDGL 236
             ++ L     E  ++ +AL+LF                E+M+   V       ++ + GL
Sbjct: 862  AFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGL 921

Query: 237  CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
            CK G + EA+ +F ++        I  +  L+ GLCK  +++ A  L + +    L  DV
Sbjct: 922  CKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDV 981

Query: 297  VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
            VTYN++I GLCN   +  A DL+ +M+   + PN+  ++TL              +LL  
Sbjct: 982  VTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKD 1041

Query: 357  MKEKKVMPD 365
            ++++ ++P 
Sbjct: 1042 IEDRGIVPS 1050



 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 185/360 (51%), Gaps = 1/360 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +  T N +++ LC +G + KA+++  +MK   + P+ VTYN++++          A R+ 
Sbjct: 229 DVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRIL 287

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M   G++  + T+N+++D+LCK  +   A  LL  M + ++ P+  +Y+TL+ GF   
Sbjct: 288 DDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGE 347

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GKIN A  +F  M     K    +Y  LI+GYC+N   +EA  +  EM   G++P+ +TY
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTY 407

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + L  G  +  ++  AL L + ++   ++ + + Y   IDG C+ G + +A ++ + +  
Sbjct: 408 SALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLA 467

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + D+  Y+ LI+G+CK G +    E+   + +  ++ + V Y  ++   C  G   +
Sbjct: 468 DGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKE 527

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A   F+D+  + +  N +I   L+  F R    ++  +    M   K+  D +  + ++D
Sbjct: 528 ALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIID 587



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 177/364 (48%), Gaps = 4/364 (1%)

Query: 12  CKP-NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           C P N  + + +++   KEG V  A A    M        + + N++++ L   N     
Sbjct: 155 CDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYV 214

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR-PNAFTYSTLMD 129
                E +D+     V T N++++ LC  GK+ +A  +L  M  ++ R PNA TY+T+++
Sbjct: 215 WLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKM--KNCRLPNAVTYNTILN 272

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            +   G+   A  +   ME  G + D  +YNI+I+  CK K    A  L + M    + P
Sbjct: 273 WYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTP 332

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
              +YNTL  G F   ++  A+ +F +M R  +    +TY   IDG C+NG   EA  + 
Sbjct: 333 DECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVL 392

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             + I         Y+ L++G CK  +L  AL+L + L  R +  +   Y I+I G C  
Sbjct: 393 YEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQL 452

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++ KA  +   M  + + P+VI +  LI+G  ++    +  E+L +M++  V+P+  + 
Sbjct: 453 GEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLY 512

Query: 370 SMVV 373
           + +V
Sbjct: 513 TTLV 516



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 178/389 (45%), Gaps = 38/389 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TY+ +I+G+CK G + + K +  +M+   + P+ V Y +L+   C A    EA + 
Sbjct: 472 PDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKY 531

Query: 74  FFEMMDQG-----------------------------------VQPSVVTFNVIMDELCK 98
           F ++   G                                   +   V +FN I+D  C+
Sbjct: 532 FVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQ 591

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
            G + EA  + D MV+    P+  TY +L+ G C  G + +A+E    +    C  D+ +
Sbjct: 592 RGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKT 651

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
            N L+ G CK+  ++EAL L  +MV++ I P   TY  L  G  +  +V  AL L + M 
Sbjct: 652 LNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMML 711

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL--DIQAYNCLIDGLCKSGR 276
              +  DT  Y   ++GL   G +  A  +F+ + I K  L  D  AYN +++G  K G+
Sbjct: 712 EKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI-ICKEGLYADCIAYNSMMNGYLKGGQ 770

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +     L R++    +     +YNI++HG    GQ+ +   L+ DM +  + P+ + +  
Sbjct: 771 INEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRL 830

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LI G          ++ L KM  + V PD
Sbjct: 831 LIFGLCEYGLIEIAVKFLEKMVLEGVFPD 859



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 172/381 (45%), Gaps = 52/381 (13%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +  ++N IID  C+ G V +A +++  M      PD+ TY SL+ GLC      +AK   
Sbjct: 578 DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM 637

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             ++++       T N ++  +CK+G +DEA  L + MV R++ P+ +TY+ L+DGFC  
Sbjct: 638 VYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKR 697

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVT 193
           GK+  A  L   M   G   D ++Y  L+NG     +V+ A  +++E++ K G+    + 
Sbjct: 698 GKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIA 757

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN++  G  +  Q+    +L   M  ++V   +++YN  + G  K G +   + L+R + 
Sbjct: 758 YNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMV 817

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI---------- 303
               + D   Y  LI GLC+ G +EIA++    +    +  D + ++I+I          
Sbjct: 818 KEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMS 877

Query: 304 -----------------------------------------HGLCNDGQMDKAHDLFLDM 322
                                                     GLC  G++++A  +F  +
Sbjct: 878 NALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSI 937

Query: 323 EENAVAPNVIIFVTLIHGFVR 343
               + P +  F TL+HG  +
Sbjct: 938 MRAGMVPTIATFTTLMHGLCK 958



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 117/222 (52%), Gaps = 16/222 (7%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            KP+ VTY  +I GLC+ G ++ A     +M  E + PD + ++ LI      +  + A +
Sbjct: 822  KPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQ 881

Query: 73   LF------------FEMMDQ----GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
            LF            FE+ +     GV PS V  + I+  LCK GK++EA  +   +++  
Sbjct: 882  LFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAG 941

Query: 117  VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
            + P   T++TLM G C   KI+ A  L   MES G K D V+YN+LI G C  K + +AL
Sbjct: 942  MVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDAL 1001

Query: 177  SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
             LY EM SKG+ P + TY TL   ++    ++   KL ++++
Sbjct: 1002 DLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIE 1043



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 41/73 (56%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            K + VTYN +I GLC +  +  A  L+ +MK + + P++ TY +L   +       + ++
Sbjct: 978  KVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEK 1037

Query: 73   LFFEMMDQGVQPS 85
            L  ++ D+G+ PS
Sbjct: 1038 LLKDIEDRGIVPS 1050


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 133/396 (33%), Positives = 194/396 (48%), Gaps = 35/396 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGL------------ 61
           PN  T+N +ID LCK+G + +A+ALF++MK    +PDVVTYNSLI G             
Sbjct: 197 PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELL 256

Query: 62  --------CHAN--------------DWNE-AKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                   C A+               W E A   F EM   GV  +VVT +  +D  CK
Sbjct: 257 VSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCK 316

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
            G + EA +L   M  R + PN FTY++L+DG C  G+++ A  L   M   G   + V+
Sbjct: 317 EGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 376

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y ++++G CK  +V  A  +   M   G+K   + Y TL  G F     E AL L  EM+
Sbjct: 377 YTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMK 436

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  D S Y T I GLCK   + EA  L   +       +   Y  ++D   K+G+  
Sbjct: 437 NKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKES 496

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A+ L   +P   L  +VVTY  +I GLC  G + +A   F  M E  + PNV ++ TLI
Sbjct: 497 EAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLI 556

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            GF +I   SK + L+++M +K +  D  + + ++D
Sbjct: 557 DGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLID 592



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/353 (33%), Positives = 181/353 (51%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N VT +T +D  CKEG V +A  LF QM+   + P+  TY SL+ G C A   ++A  L 
Sbjct: 303 NVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLL 362

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ QG+ P+VVT+ V++D LCK GK+  A  +L LM +  V+ N   Y+TL+ G  + 
Sbjct: 363 DEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMN 422

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
               RA +L   M++ G + D   Y  LI G CK ++++EA SL  +M   G++P  V Y
Sbjct: 423 KNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIY 482

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            T+    F+  +   A+ L  ++    +  +  TY   IDGLCK G I EA+  F  +  
Sbjct: 483 TTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRE 542

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L  + ++Q Y  LIDG CK G L  A+ L   +  + +  D V Y  +I G    G +  
Sbjct: 543 LGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQG 602

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           A  L   M E  +  ++  +   I GF  +N   +   +L +M    + PD +
Sbjct: 603 AFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKT 655



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 186/354 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  + VTYN +I+   K G+++KA + F +MK   +  +VVT ++ +   C      EA 
Sbjct: 265 CAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAM 324

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +LF +M  +G+ P+  T+  ++D  CK G++D+A  LLD MV + + PN  TY+ ++DG 
Sbjct: 325 KLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGL 384

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+  A+++   ME  G K +++ Y  LI+G+  NK  E AL L  EM +KG++  V
Sbjct: 385 CKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDV 444

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y TL  GL ++ +++ A  L  +M    +  +T  Y T +D   K G   EAV L   
Sbjct: 445 SLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHK 504

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + ++  Y  LIDGLCK+G +  A+  F  +    L  +V  Y  +I G C  G 
Sbjct: 505 IPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGS 564

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + KA  L  +M +  ++ + +++ +LI G ++         L  KM E  +  D
Sbjct: 565 LSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLD 618



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/324 (34%), Positives = 165/324 (50%), Gaps = 39/324 (12%)

Query: 84  PSVVTFNVIMDELCKNGKMDEASRLL----DLMVQRDVR--------------------- 118
           PSV  F+ ++  L  +G +D+A R L     L V  + R                     
Sbjct: 133 PSV--FDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRL 190

Query: 119 ------PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
                 PN FT++ ++D  C  G++  A  LF  M++MGC  D V+YN LI+GY K  E+
Sbjct: 191 FEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGEL 250

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           EE   L  EM   G    VVTYN L     +   +E A   F EM+R  V A+  T +TF
Sbjct: 251 EEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTF 310

Query: 233 IDGLCKNGYIVEAVELF---RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           +D  CK G + EA++LF   R  G++  E     Y  L+DG CK+GRL+ A+ L   +  
Sbjct: 311 VDAFCKEGLVREAMKLFAQMRVRGMMPNEF---TYTSLVDGTCKAGRLDDAIVLLDEMVH 367

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
           + LV +VVTY +M+ GLC +G++  A D+   ME   V  N +++ TLIHG        +
Sbjct: 368 QGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSER 427

Query: 350 VIELLHKMKEKKVMPDASIVSMVV 373
            ++LL++MK K +  D S+   ++
Sbjct: 428 ALDLLNEMKNKGMELDVSLYGTLI 451



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 149/311 (47%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  ++DGLCKEG V  A  +   M+   +  + + Y +LIHG     +   A  L
Sbjct: 372 PNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDL 431

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM ++G++  V  +  ++  LCK  K+DEA  LL  M    +RPN   Y+T+MD F  
Sbjct: 432 LNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFK 491

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK + A  L   +   G + + V+Y  LI+G CK   + EA+S + +M   G+ P V  
Sbjct: 492 AGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQV 551

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G  +I  +  A+ L  EM    ++ D   Y + IDG  K G +  A  L   + 
Sbjct: 552 YTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMI 611

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +LD+  Y C I G C    ++ A  +   +    +  D   YN +I      G M+
Sbjct: 612 ETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNME 671

Query: 314 KAHDLFLDMEE 324
           +A  L  +ME 
Sbjct: 672 EASSLQNEMES 682



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 105/206 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PNTV Y TI+D   K G   +A AL  ++    + P+VVTY +LI GLC A    EA  
Sbjct: 476 RPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAIS 535

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F +M + G+ P+V  +  ++D  CK G + +A  L++ MV + +  +   Y++L+DG  
Sbjct: 536 HFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHM 595

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  L   M   G + D   Y   I+G+C    ++EA  +  EM+  GI P   
Sbjct: 596 KQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKT 655

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQ 218
            YN L     ++  +E A  L  EM+
Sbjct: 656 AYNCLIRKYQKLGNMEEASSLQNEME 681



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 89/172 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY  +IDGLCK G + +A + F +M+   ++P+V  Y +LI G C     ++A  
Sbjct: 511 QPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVH 570

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+D+G+    V +  ++D   K G +  A  L   M++  ++ + + Y+  + GFC
Sbjct: 571 LMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFC 630

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
               +  A  +   M   G   D  +YN LI  Y K   +EEA SL  EM S
Sbjct: 631 NMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMES 682



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 98/201 (48%), Gaps = 7/201 (3%)

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
            AL+  R++    + P   T N + L L    Q     +LFE +     A +  T+N  I
Sbjct: 154 RALARVRQL---RVPPNTRTCNHILLRLARNRQGGLVRRLFEHLP----APNVFTFNIVI 206

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
           D LCK G +VEA  LF  +  + C  D+  YN LIDG  K G LE    L   + +    
Sbjct: 207 DFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCA 266

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
           ADVVTYN +I+     G ++KA+  F +M+   V  NV+   T +  F +     + ++L
Sbjct: 267 ADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKL 326

Query: 354 LHKMKEKKVMPDASIVSMVVD 374
             +M+ + +MP+    + +VD
Sbjct: 327 FAQMRVRGMMPNEFTYTSLVD 347



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 2/147 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   Y T+IDG CK G + KA  L  +M  + ++ D V Y SLI G     D   A  L
Sbjct: 547 PNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFAL 606

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M++ G+Q  +  +   +   C    M EA  +L  M+   + P+   Y+ L+  +  
Sbjct: 607 KAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQK 666

Query: 134 TGKINRAEELFGSMESM--GCKHDDVS 158
            G +  A  L   MES+   C  +D +
Sbjct: 667 LGNMEEASSLQNEMESVLSSCTEEDTA 693


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 199/395 (50%), Gaps = 34/395 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P   T+ T+I G CK+  V+KA  L+ +M  + I P V T+ +LI+GLC  N+  EA +
Sbjct: 460 EPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASK 519

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM+++ ++P+ VT+NV+++  CK   MD+A  LL+ M+   + P+ +TY  L+ G C
Sbjct: 520 LFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLC 579

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            TG+++ A++    +     K +++ Y+ L++GYC    + EALS   EM+ +GI   +V
Sbjct: 580 STGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLV 639

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            +  L  G  +   ++    L ++M    +  D+  Y + ID   K G   ++ E    +
Sbjct: 640 CHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLM 699

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL------PRRV--------------- 291
              KC  ++  Y   ++GLCK G ++ A  LF  +      P  V               
Sbjct: 700 VTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNM 759

Query: 292 -------------LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
                        L+A+  TYNI+I G C  G++ +A  +  +M EN + P+ I + T+I
Sbjct: 760 KEATDLHHEMLKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTII 819

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +   R       +EL   M  K V PD+   ++++
Sbjct: 820 YEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLI 854



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 196/368 (53%), Gaps = 2/368 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+G V  P     + ++DGL K+G +D A  L +++      P++  YN+LI+ LC   D
Sbjct: 316 ELGFV--PTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGED 373

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            ++A+ L+  M    +  + VT+++++D  CK G +D A      M++  +R   + Y++
Sbjct: 374 LDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNS 433

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L++G C  G ++ AE L+  M + G +    ++  LI+GYCK+ +VE+A  LYREM  K 
Sbjct: 434 LINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKE 493

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I P+V T+  L  GL   +++  A KLF+EM    +     TYN  I+G CK   + +A 
Sbjct: 494 IAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAF 553

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           EL   +       D   Y  LI GLC +GR+  A +    L ++ L  + + Y+ ++HG 
Sbjct: 554 ELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGY 613

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C  G++ +A     +M +  +  +++    LI G ++     ++  LL KM ++ + PD+
Sbjct: 614 CGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDS 673

Query: 367 SIVSMVVD 374
            I + ++D
Sbjct: 674 VIYTSMID 681



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 191/393 (48%), Gaps = 35/393 (8%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTYN +I GLCK G V +A  +   ++ + +  DVVTY +L+ G C    +++   L  E
Sbjct: 254 VTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNE 313

Query: 77  MMDQGVQPS-----------------------------------VVTFNVIMDELCKNGK 101
           M++ G  P+                                   +  +N +++ LCK   
Sbjct: 314 MVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGED 373

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D+A  L   M   ++  N  TYS L+D FC  G ++ AE  FG M   G +     YN 
Sbjct: 374 LDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNS 433

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LING+CK  ++  A  LY +M+++G++PT  T+ TL  G  +  QVE A KL+ EM   +
Sbjct: 434 LINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKE 493

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           +A    T+   I GLC    + EA +LF  +   K +     YN +I+G CK+  ++ A 
Sbjct: 494 IAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAF 553

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           EL   +    LV D  TY  +I GLC+ G++  A D   D+ +  +  N + +  L+HG+
Sbjct: 554 ELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGY 613

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
               + ++ +    +M ++ +  D    ++++D
Sbjct: 614 CGQGRLTEALSASCEMIQRGINMDLVCHAVLID 646



 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 177/360 (49%), Gaps = 2/360 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G  G +  PN   YN +I+ LCK   +DKA+ L+  M   N+  + VTY+ LI   C   
Sbjct: 350 GRFGFL--PNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRG 407

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             + A+  F  M++ G++ ++  +N +++  CK G +  A  L   M+   + P A T++
Sbjct: 408 MLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFT 467

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+ G+C   ++ +A +L+  M          ++  LI G C   E+ EA  L+ EMV +
Sbjct: 468 TLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVER 527

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            IKPT VTYN +  G  + H ++ A +L E+M  + +  DT TY   I GLC  G +  A
Sbjct: 528 KIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAA 587

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            +    L     +L+   Y+ L+ G C  GRL  AL     + +R +  D+V + ++I G
Sbjct: 588 KDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDG 647

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
                 M +   L   M +  + P+ +I+ ++I  + +     K  E L  M  +K  P+
Sbjct: 648 AMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPN 707



 Score =  167 bits (422), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 181/382 (47%), Gaps = 38/382 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  T + +I  LC+     +AK   L M+    +  +VTYN LIHGLC      EA  
Sbjct: 215 KPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALE 274

Query: 73  LFFEMMDQGVQPSVVTF-----------------------------------NVIMDELC 97
           +   + ++G++  VVT+                                   + ++D L 
Sbjct: 275 VRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLR 334

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K G +D A  L+  + +    PN F Y+ L++  C    +++AE L+ +M SM    +DV
Sbjct: 335 KKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDV 394

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y+ILI+ +CK   ++ A S +  M+  GI+ T+  YN+L  G  +   +  A  L+ +M
Sbjct: 395 TYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKM 454

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
             + +    +T+ T I G CK+  + +A +L+R +   +    +  +  LI GLC +  +
Sbjct: 455 INEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEM 514

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A +LF  +  R +    VTYN+MI G C    MDKA +L  DM  N + P+   +  L
Sbjct: 515 AEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPL 574

Query: 338 IHGFV---RINKPSKVIELLHK 356
           I G     R++     I+ LHK
Sbjct: 575 ISGLCSTGRVSAAKDFIDDLHK 596



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 178/361 (49%), Gaps = 16/361 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T TY  +I GLC  G V  AK     +  +N+  + + Y++L+HG C      EA   
Sbjct: 566 PDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSA 625

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+ +G+   +V   V++D   K   M     LL  M  + +RP++  Y++++D +  
Sbjct: 626 SCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSK 685

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G   ++ E    M +  C  + V+Y   +NG CK  E++ A  L+ +M++  I P  VT
Sbjct: 686 EGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVT 745

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           Y      L +   ++ A  L  EM +  + A+T+TYN  I G CK G ++EA ++   + 
Sbjct: 746 YGCFLDSLTKEGNMKEATDLHHEMLKG-LLANTATYNILIRGFCKLGRLIEATKVLSEMT 804

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             GI     D   Y+ +I   C+SG +  A+EL+ ++ R+ +  D V +N++I+G C +G
Sbjct: 805 ENGIFP---DCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNG 861

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVT---------LIHGFVRINKPSKVIELLHKMKEKK 361
            +DKA +L  DM    + P  I+ +          L+HG     +    + L H M  + 
Sbjct: 862 ALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRA 921

Query: 362 V 362
           V
Sbjct: 922 V 922



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 171/367 (46%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G    P   T + I++GL +         +F +     + PD  T +++I  LC   D+
Sbjct: 175 LGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDF 234

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             AK     M       S+VT+NV++  LCK G + EA  +   + ++ ++ +  TY TL
Sbjct: 235 CRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTL 294

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + GFC   + +    L   M  +G    + + + L++G  K   ++ A  L  ++   G 
Sbjct: 295 VLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGF 354

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P +  YN L   L +   ++ A  L++ M   ++  +  TY+  ID  CK G +  A  
Sbjct: 355 LPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAES 414

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            F  +        I  YN LI+G CK G L  A  L+  +    L     T+  +I G C
Sbjct: 415 YFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYC 474

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            D Q++KA  L+ +M E  +AP+V  F  LI+G    N+ ++  +L  +M E+K+ P   
Sbjct: 475 KDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEV 534

Query: 368 IVSMVVD 374
             +++++
Sbjct: 535 TYNVMIE 541



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 168/363 (46%), Gaps = 1/363 (0%)

Query: 12  CK-PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           CK  +T+ ++ ++    +   V  A  +   M G  + P+V T +++++GL     +   
Sbjct: 143 CKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILV 202

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             +F E ++ GV+P   T + ++  LC+      A   +  M       +  TY+ L+ G
Sbjct: 203 WEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHG 262

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  G +  A E+  S+   G K D V+Y  L+ G+C+ ++ ++ + L  EMV  G  PT
Sbjct: 263 LCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPT 322

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
               + L  GL +   ++ A  L  ++ R     +   YN  I+ LCK   + +A  L++
Sbjct: 323 EAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYK 382

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +  +   L+   Y+ LID  CK G L++A   F  +    +   +  YN +I+G C  G
Sbjct: 383 NMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFG 442

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            +  A  L+  M    + P    F TLI G+ +  +  K  +L  +M EK++ P     +
Sbjct: 443 DLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFT 502

Query: 371 MVV 373
            ++
Sbjct: 503 ALI 505



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 133/256 (51%), Gaps = 27/256 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY   ++GLCK G +D+A  LF +M   NI+P+ VTY   +  L    +  EA 
Sbjct: 704 CFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEAT 763

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+ +G+  +  T+N+++   CK G++ EA+++L  M +  + P+  TYST++   
Sbjct: 764 DLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEH 822

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +G +  A EL+ +M   G + D V++N+LI G C N  +++A  L  +M+S+G+KP  
Sbjct: 823 CRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQ 882

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +                       ++Q+ D+       N  + G C  G +  A+ L+ +
Sbjct: 883 IL----------------------QLQKRDLGV----CNFLMHGGCVTGEVDTALRLYHS 916

Query: 252 LGILKCELDIQAYNCL 267
           +     +L ++ + CL
Sbjct: 917 MLTRAVKLSLEMWKCL 932



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/382 (23%), Positives = 154/382 (40%), Gaps = 52/382 (13%)

Query: 45  ENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQP-----------------SVV 87
           +N+N    ++  L+H L     +  A  L   ++ +G  P                 S +
Sbjct: 90  KNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRGSDPKFVFEKFLESHKQCKFSSTL 149

Query: 88  TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
            F+ ++    +N ++ +A  +L LM+   + P   T S +++G     K     E+F   
Sbjct: 150 GFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDES 209

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
            + G K D  + + +I   C+ K+   A      M S     ++VTYN L  GL +   V
Sbjct: 210 VNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGV 269

Query: 208 EHALKLFEEMQRDDVAADTSTYNT-----------------------------------F 232
             AL++ + ++   +  D  TY T                                    
Sbjct: 270 LEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGL 329

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           +DGL K G I  A +L   LG      ++  YN LI+ LCK   L+ A  L++++    L
Sbjct: 330 VDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNL 389

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
             + VTY+I+I   C  G +D A   F  M E+ +   +  + +LI+G  +    S    
Sbjct: 390 PLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEF 449

Query: 353 LLHKMKEKKVMPDASIVSMVVD 374
           L  KM  + + P A+  + ++ 
Sbjct: 450 LYTKMINEGLEPTATTFTTLIS 471



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 132/314 (42%), Gaps = 21/314 (6%)

Query: 65  NDWNEAKRLF-FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
           +D   A R F F  + + +  +  +F +++  L +N     A+ LL  ++ R   P  F 
Sbjct: 74  HDSKLALRFFNFLGLHKNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRGSDPK-FV 132

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDD-VSYNILINGYCKNKEVEEALSLYREM 182
           +   ++                      CK    + ++ L++ Y +N  V +A+ + R M
Sbjct: 133 FEKFLES------------------HKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLM 174

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
           +   + P V T + +  GL  I +     ++F+E     V  D  T +  I  LC+    
Sbjct: 175 LGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDF 234

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
             A E    +   + +L I  YN LI GLCK G +  ALE+ +SL  + L  DVVTY  +
Sbjct: 235 CRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTL 294

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           + G C   Q D    L  +M E    P       L+ G  +        +L+ K+     
Sbjct: 295 VLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGF 354

Query: 363 MPDASIVSMVVDLL 376
           +P+  + + +++ L
Sbjct: 355 LPNLFVYNALINAL 368


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1202

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 199/397 (50%), Gaps = 35/397 (8%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P+ +TYNT+IDG CK+G  +K+  +  +MK +NI P ++T+N+L+ GL  A    +A+ +
Sbjct: 620  PSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENV 679

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              EM DQG  P   TF+++ D    N K D A  + +  V   ++ NA+T S L++  C 
Sbjct: 680  LTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCK 739

Query: 134  TGKINRAEELFG-----------------------------------SMESMGCKHDDVS 158
             G+I +AEE+ G                                   +ME  G K D ++
Sbjct: 740  EGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLA 799

Query: 159  YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
            YN LI  +C+  ++E A     +M  KG+ P+V TYN L  G    ++ +    L +EM+
Sbjct: 800  YNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEME 859

Query: 219  RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
             +    +  +Y T I+ LCK   ++EA  + R +       +++ YN LIDG C  G++E
Sbjct: 860  DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIE 919

Query: 279  IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
             A      + ++ +  ++VTYN +I GL  +G++ +A D+ L++    + P+V  + +LI
Sbjct: 920  DAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLI 979

Query: 339  HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
             G+       + I L  +MK   + P      +++ L
Sbjct: 980  SGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISL 1016



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 184/362 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+   Y   I    K   V K   LF +MK + I+P V  YN LI GLC      +A++
Sbjct: 549 RPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQ 608

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM+ + + PS++T+N ++D  CK+G  +++ ++ + M   ++ P+  T++TL+ G  
Sbjct: 609 LFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLF 668

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  AE +   M+  G   D  +++IL +GY  N + + AL +Y   V  G+K    
Sbjct: 669 KAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAY 728

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T + L   L +  Q+E A ++        +  +   YNT IDG  + G +V A      +
Sbjct: 729 TCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAM 788

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D  AYNCLI   C+ G +E A +    +  + +   V TYNI+I G     + 
Sbjct: 789 EKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEF 848

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           DK  DL  +ME+N   PNV+ + TLI+   + +K  +   +   M+++ V P+  I +M+
Sbjct: 849 DKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNML 908

Query: 373 VD 374
           +D
Sbjct: 909 ID 910



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 182/360 (50%), Gaps = 4/360 (1%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            PN V YNT+IDG  ++G +  A+     M+ + + PD + YN LI   C   D   A++ 
Sbjct: 760  PNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQE 819

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              +M  +GV PSV T+N+++    +  + D+   LL  M      PN  +Y TL++  C 
Sbjct: 820  VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCK 879

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              K+  A+ +   ME  G   +   YN+LI+G C   ++E+A     EM  KGI+  +VT
Sbjct: 880  GSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVT 939

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            YNTL  GL    ++  A  +  E+ R  +  D  TYN+ I G    G +   + L+  + 
Sbjct: 940  YNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMK 999

Query: 254  ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                +  ++ Y+ LI  LC    +E+  ++F  +    L  D++ YN ++H     G MD
Sbjct: 1000 TSGIKPTLKTYHLLI-SLCTKEGIELTKKIFGEMS---LQPDLLVYNGVLHCYAVHGDMD 1055

Query: 314  KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            KA +L   M E ++  +   + +LI G +++ K  +V  L+ +MK +++ P+A    ++V
Sbjct: 1056 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIV 1115



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 178/349 (51%), Gaps = 4/349 (1%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P+  TYN +I G  ++   DK   L  +M+     P+VV+Y +LI+ LC  +   EA+ +
Sbjct: 830  PSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 889

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              +M D+GV P+V  +N+++D  C  GK+++A R  + M ++ +  N  TY+TL+DG  +
Sbjct: 890  KRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSM 949

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             GK+  AE++   +   G K D  +YN LI+GY     V+  ++LY EM + GIKPT+ T
Sbjct: 950  NGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKT 1009

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            Y+ L + L     +E   K+F EM    +  D   YN  +     +G + +A  L + + 
Sbjct: 1010 YH-LLISLCTKEGIELTKKIFGEMS---LQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMI 1065

Query: 254  ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 LD   YN LI G  K G+L     L   +  R +  +  TY+I++ G C      
Sbjct: 1066 EKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYM 1125

Query: 314  KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
             A+  + +M+E  +  +V I   L+ G     +  +   ++ +M  +K+
Sbjct: 1126 GAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGRKL 1174



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 174/357 (48%), Gaps = 6/357 (1%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            KP+ + YN +I   C+ G ++ A+    +MK + ++P V TYN LI G     ++++   
Sbjct: 794  KPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 853

Query: 73   LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            L  EM D G  P+VV++  +++ LCK  K+ EA  +   M  R V PN   Y+ L+DG C
Sbjct: 854  LLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCC 913

Query: 133  LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              GKI  A      M   G + + V+YN LI+G   N ++ EA  +  E+  KG+KP V 
Sbjct: 914  SKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVF 973

Query: 193  TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            TYN+L  G      V+  + L+EEM+   +     TY+  I  LC      E +EL + +
Sbjct: 974  TYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLI-SLCTK----EGIELTKKI 1028

Query: 253  -GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
             G +  + D+  YN ++      G ++ A  L + +  + +  D  TYN +I G    G+
Sbjct: 1029 FGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGK 1088

Query: 312  MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            + +   L  +M+   + P    +  ++ G   +           +M+EK ++ D  I
Sbjct: 1089 LCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCI 1145



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 159/344 (46%), Gaps = 4/344 (1%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           + +A  LF  ++ E I P   +   L+  L     +     +F  +++   +PS   +  
Sbjct: 498 ISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 557

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
            +    K   + +   L + M    + P  F Y+ L+DG C   ++  AE+LF  M +  
Sbjct: 558 AIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARR 617

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
                ++YN LI+GYCK+   E++  +   M +  I+P+++T+NTL  GLF+   VE A 
Sbjct: 618 LLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAE 677

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC--LID 269
            +  EM+      D  T++   DG   N     A+ ++ T   +   L + AY C  L++
Sbjct: 678 NVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYET--AVDSGLKMNAYTCSILLN 735

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
            LCK G++E A E+      + LV + V YN MI G    G +  A      ME+  + P
Sbjct: 736 ALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKP 795

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           + + +  LI  F  +       + ++KMK K V P     ++++
Sbjct: 796 DHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILI 839



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 177/366 (48%), Gaps = 6/366 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P++ +   ++D L K         +FL +   +  P    Y   I      +D  +   L
Sbjct: 515 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 574

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M    + P+V  +NV++D LCK  +M +A +L D M+ R + P+  TY+TL+DG+C 
Sbjct: 575 FNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCK 634

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G   ++ ++   M++   +   +++N L+ G  K   VE+A ++  EM  +G  P   T
Sbjct: 635 DGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFT 694

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF-RTL 252
           ++ LF G     + + AL ++E      +  +  T +  ++ LCK G I +A E+  R +
Sbjct: 695 FSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREM 754

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             G++  E+    YN +IDG  + G L  A     ++ ++ +  D + YN +I   C  G
Sbjct: 755 AKGLVPNEV---LYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELG 811

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            M+ A      M+   V+P+V  +  LI G+ R  +  K  +LL +M++   MP+     
Sbjct: 812 DMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYG 871

Query: 371 MVVDLL 376
            +++ L
Sbjct: 872 TLINCL 877



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 156/315 (49%), Gaps = 32/315 (10%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            PN V+Y T+I+ LCK   + +A+ +   M+   ++P+V  YN LI G C      +A R 
Sbjct: 865  PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRF 924

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              EM  +G++ ++VT+N ++D L  NGK+ EA  +L  + ++ ++P+ FTY++L+ G+  
Sbjct: 925  SEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRF 984

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILI---------------------------NG- 165
             G + R   L+  M++ G K    +Y++LI                           NG 
Sbjct: 985  AGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGV 1044

Query: 166  ---YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
               Y  + ++++A +L ++M+ K I     TYN+L LG  ++ ++     L +EM+  ++
Sbjct: 1045 LHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREM 1104

Query: 223  AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
              +  TY+  + G C+    + A   +R +      LD+   + L+ GL +  R + A  
Sbjct: 1105 EPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAEN 1164

Query: 283  LFRSLPRRVLVADVV 297
            +   +  R L  DV+
Sbjct: 1165 VISEMNGRKL-GDVI 1178



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 136/307 (44%), Gaps = 35/307 (11%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +EA  LFF + ++G+ PS  +  +++D L K  +      +   +++ D RP+ F Y   
Sbjct: 499 SEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKA 558

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +        + +  ELF  M     KHD +S                             
Sbjct: 559 IQAAVKLSDVGKGLELFNRM-----KHDRIS----------------------------- 584

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            PTV  YN L  GL ++ Q++ A +LF+EM    +     TYNT IDG CK+G   ++ +
Sbjct: 585 -PTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFK 643

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +   +     E  +  +N L+ GL K+G +E A  +   +  +  V D  T++I+  G  
Sbjct: 644 VRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYS 703

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           ++ + D A  ++    ++ +  N      L++   +  +  K  E+L +   K ++P+  
Sbjct: 704 SNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEV 763

Query: 368 IVSMVVD 374
           + + ++D
Sbjct: 764 LYNTMID 770



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 116/243 (47%), Gaps = 3/243 (1%)

Query: 134 TGKINRAEELFG--SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           +      +ELF   S+ S   KHD  SY +L     ++K + EA  L+  + ++GI P+ 
Sbjct: 459 SAPFTSPKELFSAFSLSSPSLKHD-FSYLLLSVLLNESKMISEAADLFFALRNEGIFPSS 517

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +   L   L +  Q    + +F  +   D       Y   I    K   + + +ELF  
Sbjct: 518 DSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNR 577

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +    +  YN LIDGLCK  +++ A +LF  +  R L+  ++TYN +I G C DG 
Sbjct: 578 MKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGN 637

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            +K+  +   M+ + + P++I F TL+ G  +         +L +MK++  +PDA   S+
Sbjct: 638 PEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSI 697

Query: 372 VVD 374
           + D
Sbjct: 698 LFD 700


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  204 bits (518), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 193/364 (53%), Gaps = 2/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY++II  L K   +DKA  +F +M    + PD + Y SL+HG C +    EA  +
Sbjct: 241 PDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGI 300

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M   GV+P VVT+  +MD LCKNGK  EA ++ D +V+R  +P++ TY TL+ G+  
Sbjct: 301 FKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYAT 360

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +    +L   M   G +     +N+++  Y K+ +V+EAL ++  M  +G+ P +V 
Sbjct: 361 EGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVN 420

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL-FRTL 252
           Y T+   L    +V+ AL  F  ++ + +A +   + T I GLC      +  EL F  +
Sbjct: 421 YGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMI 480

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C LD   +N ++  LCK GR+  A  LF  + R  +  +  TYN +I G C DG+M
Sbjct: 481 DRGIC-LDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKM 539

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A  L   M  N V P+ + + T+I+G+ +  +    + LL +M  K V P      M+
Sbjct: 540 DEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEML 599

Query: 373 VDLL 376
           +  L
Sbjct: 600 LQGL 603



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 91/209 (43%), Positives = 132/209 (63%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V Y T++D LC  G VD A + F  +K E + P++V + +LIHGLC  + W++ + L
Sbjct: 416 PDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEEL 475

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            FEM+D+G+    + FN IM  LCK G++ EA  L DLMV+  + PN  TY+TL+DG+CL
Sbjct: 476 AFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCL 535

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A +L G M   G K  DV+YN +INGY +N  +E+ L+L REM  KG+ P +VT
Sbjct: 536 DGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVT 595

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           Y  L  GLF+  +   A +L+  M + D 
Sbjct: 596 YEMLLQGLFQAGRTVAAKELYLRMIKWDT 624



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 173/344 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + Y +++ G C  G   +A  +F +M    + PDVVTY +L+  LC      EA+++
Sbjct: 276 PDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKI 335

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  ++ +G +P   T+  ++      G + E   LLDLM+++ ++     ++ +M  +  
Sbjct: 336 FDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAK 395

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K++ A  +F +M   G   D V+Y  +++  C    V++ALS +  + S+G+ P +V 
Sbjct: 396 HNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVV 455

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           + TL  GL    + +   +L  EM    +  DT  +N  +  LCK G ++EA  LF  + 
Sbjct: 456 FTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMV 515

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  E +   YN LIDG C  G+++ A++L   +    +    VTYN +I+G   +G+++
Sbjct: 516 RIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIE 575

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
               L  +M+   V P ++ +  L+ G  +  +     EL  +M
Sbjct: 576 DGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 619



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 138/271 (50%), Gaps = 2/271 (0%)

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG--CKHDDVSYNILING 165
           +L  M +   +P+ F+Y+ L+ G C      +A +L   M      C  D V+Y  +ING
Sbjct: 158 VLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVING 217

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
             +  ++++A SL+  M+ +G  P VVTY+++   L +   ++ A ++F  M ++ V  D
Sbjct: 218 LLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPD 277

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
              Y + + G C +G   EA+ +F+ +     E D+  Y  L+D LCK+G+   A ++F 
Sbjct: 278 CIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFD 337

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
           SL +R    D  TY  ++HG   +G + + HDL   M +  +     IF  ++  + + N
Sbjct: 338 SLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHN 397

Query: 346 KPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           K  + + +   M+++ + PD      V+D+L
Sbjct: 398 KVDEALLVFSNMRQQGLNPDIVNYGTVLDIL 428



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 2/111 (1%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            IG+  +PNT TYNT+IDG C +G +D+A  L   M    + P  VTYN++I+G      
Sbjct: 516 RIGI--EPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGR 573

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV 117
             +   L  EM  +GV P +VT+ +++  L + G+   A  L   M++ D 
Sbjct: 574 IEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIKWDT 624


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 198/364 (54%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC P    ++ +   L   G +++A   F +MK   + P   + N L+H        ++ 
Sbjct: 187 VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           KR F +M+  G +P+V T+N+++D +CK G ++ A  L + M  R + P+  TY++++DG
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           F   G+++     F  M+ M C+ D ++YN LIN +CK  ++   L  YREM   G+KP 
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VV+Y+TL     +   ++ A+K + +M+R  +  +  TY + ID  CK G + +A  L  
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +  +  E ++  Y  LIDGLC + R++ A ELF  +    ++ ++ +YN +IHG     
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            MD+A +L  +++   + P+++++ T I G   + K      ++++MKE  +  ++ I +
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546

Query: 371 MVVD 374
            ++D
Sbjct: 547 TLMD 550



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 191/390 (48%), Gaps = 36/390 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ +TYN +I+  CK G +      + +MKG  + P+VV+Y++L+   C      +A 
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           + + +M   G+ P+  T+  ++D  CK G + +A RL + M+Q  V  N  TY+ L+DG 
Sbjct: 388 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 447

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++  AEELFG M++ G   +  SYN LI+G+ K K ++ AL L  E+  +GIKP +
Sbjct: 448 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 507

Query: 192 VTYNTLFLGLFEIHQVEHA-----------------------------------LKLFEE 216
           + Y T   GL  + ++E A                                   L L +E
Sbjct: 508 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 567

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF-RTLGILKCELDIQAYNCLIDGLCKSG 275
           M+  D+     T+   IDGLCKN  + +AV+ F R       + +   +  +IDGLCK  
Sbjct: 568 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 627

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           ++E A  LF  + ++ LV D   Y  ++ G    G + +A  L   M E  +  +++ + 
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 687

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +L+ G    N+  K    L +M  + + PD
Sbjct: 688 SLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 187/403 (46%), Gaps = 36/403 (8%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           IG   +P   TYN +ID +CKEG V+ A+ LF +MK   + PD VTYNS+I G       
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++    F EM D   +P V+T+N +++  CK GK+         M    ++PN  +YSTL
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D FC  G + +A + +  M  +G   ++ +Y  LI+  CK   + +A  L  EM+  G+
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +  VVTY  L  GL +  +++ A +LF +M    V  + ++YN  I G  K   +  A+E
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493

Query: 248 LFRTLGILKCELDIQAYNCLIDGLC----------------------------------- 272
           L   L     + D+  Y   I GLC                                   
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN-AVAPNV 331
           KSG     L L   +    +   VVT+ ++I GLC +  + KA D F  +  +  +  N 
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            IF  +I G  + N+      L  +M +K ++PD +  + ++D
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 656



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 150/278 (53%), Gaps = 1/278 (0%)

Query: 4   GNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH 63
           GN  + V  + N VTY  +IDGLC    + +A+ LF +M    + P++ +YN+LIHG   
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484

Query: 64  ANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
           A + + A  L  E+  +G++P ++ +   +  LC   K++ A  +++ M +  ++ N+  
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           Y+TLMD +  +G       L   M+ +  +   V++ +LI+G CKNK V +A+  +  + 
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604

Query: 184 SK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
           +  G++     +  +  GL + +QVE A  LFE+M +  +  D + Y + +DG  K G +
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
           +EA+ L   +  +  +LD+ AY  L+ GL    +L+ A
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKA 702



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 119/271 (43%), Gaps = 36/271 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  +YN +I G  K   +D+A  L  ++KG  I PD++ Y + I GLC       AK +
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV---------------- 117
             EM + G++ + + +  +MD   K+G   E   LLD M + D+                
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589

Query: 118 --------------------RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
                               + NA  ++ ++DG C   ++  A  LF  M   G   D  
Sbjct: 590 NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRT 649

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y  L++G  K   V EAL+L  +M   G+K  ++ Y +L  GL   +Q++ A    EEM
Sbjct: 650 AYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
             + +  D     + +    + G I EAVEL
Sbjct: 710 IGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 106/202 (52%), Gaps = 1/202 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N++ Y T++D   K G   +   L  +MK  +I   VVT+  LI GLC     ++A  
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 598

Query: 73  LFFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            F  +  D G+Q +   F  ++D LCK+ +++ A+ L + MVQ+ + P+   Y++LMDG 
Sbjct: 599 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 658

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G +  A  L   M  +G K D ++Y  L+ G     ++++A S   EM+ +GI P  
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 718

Query: 192 VTYNTLFLGLFEIHQVEHALKL 213
           V   ++    +E+  ++ A++L
Sbjct: 719 VLCISVLKKHYELGCIDEAVEL 740



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 55/104 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   Y +++DG  K+G V +A AL  +M    +  D++ Y SL+ GL H N   +A+  
Sbjct: 646 PDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSF 705

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV 117
             EM+ +G+ P  V    ++ +  + G +DEA  L   +++  +
Sbjct: 706 LEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQL 749


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 201/402 (50%), Gaps = 38/402 (9%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
             C+P+ + YN ++ G C  G +D A+ L   M  E   PD  TYN+LI GLC       
Sbjct: 118 AACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPME---PDSYTYNTLIRGLCGRGRTGN 174

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +  +M+ +G  P VVT+ ++++  CK     +A +LLD M  +   P+  TY+ +++
Sbjct: 175 ALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVN 234

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C  G+++ A E   S+ S GC+ + VSYNI++ G C  +  E+A  L  EM  KG  P
Sbjct: 235 GICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPP 294

Query: 190 TVVTYNTL--FL---GLFE------------------------IH------QVEHALKLF 214
            VVT+N L  FL   GL E                        +H      +++ A+   
Sbjct: 295 NVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFV 354

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           E M       D  +YNT +  LC+ G +  AVEL   L    C   + +YN +IDGL K+
Sbjct: 355 ELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKA 414

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G+ + ALEL   +  + L  D++TY+ +  GLC + ++++A   F  +++  + PN +++
Sbjct: 415 GKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLY 474

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             ++ G  +  +    I+L   M     MP+ S  +++++ L
Sbjct: 475 NAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGL 516



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 174/322 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TYN +++G+C+EG VD A      +      P+ V+YN ++ GLC A  W +A+
Sbjct: 222 CAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAE 281

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  EM  +G  P+VVTFN+++  LC+ G ++ A  +LD + +    PN+ +Y+ ++  F
Sbjct: 282 KLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAF 341

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++RA      M S GC  D VSYN L+   C+  EV+ A+ L  ++  KG  P +
Sbjct: 342 CKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVL 401

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++YNT+  GL +  + + AL+L  EM    +  D  TY+T   GLC+   I EA+  F  
Sbjct: 402 ISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCK 461

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +    +   YN ++ GLCK      A++LF  +     + +  TY I+I GL  +G 
Sbjct: 462 VQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGL 521

Query: 312 MDKAHDLFLDMEENAVAPNVII 333
           + +A +L  ++    V    +I
Sbjct: 522 VKEARELLGELCSRGVVSKGLI 543



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 186/365 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY  +++  CK     +A  L  +M+ +   PD++TYN +++G+C     ++A 
Sbjct: 187 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAI 246

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                +   G +P+ V++N+++  LC   + ++A +L+  M Q+   PN  T++ L+   
Sbjct: 247 EFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFL 306

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A E+   +   GC  + +SYN +++ +CK K+++ A++    MVS+G  P +
Sbjct: 307 CRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDI 366

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+YNTL   L    +V+ A++L  +++         +YNT IDGL K G   EA+EL   
Sbjct: 367 VSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNE 426

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DI  Y+ +  GLC+  R+E A+  F  +    +  + V YN ++ GLC   +
Sbjct: 427 MVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRE 486

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
              A DLF+ M  N   PN   +  LI G        +  ELL ++  + V+    I   
Sbjct: 487 THNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKGLINKA 546

Query: 372 VVDLL 376
            + LL
Sbjct: 547 AIRLL 551



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 113/262 (43%), Gaps = 12/262 (4%)

Query: 119 PNAFTYSTL----MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
           PNA  +  +    + G    G +  A  L  SM  +           LI   C +    E
Sbjct: 53  PNAVPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAE 112

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           A       V    +P V+ YN +  G     Q++ A +L  +M  +    D+ TYNT I 
Sbjct: 113 A-----RRVLAACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPME---PDSYTYNTLIR 164

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
           GLC  G    A+ +   +    C  D+  Y  L++  CK    + A++L   +  +    
Sbjct: 165 GLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAP 224

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           D++TYN++++G+C +G++D A +    +  +   PN + +  ++ G     +     +L+
Sbjct: 225 DIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLM 284

Query: 355 HKMKEKKVMPDASIVSMVVDLL 376
            +M +K   P+    +M++  L
Sbjct: 285 AEMSQKGYPPNVVTFNMLISFL 306


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 195/364 (53%), Gaps = 2/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +Y T+I+ L K G++  A  LF +M    + PDV  YN LI G     D   A  +
Sbjct: 182 PDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI 241

Query: 74  FFEMMD-QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  ++    V P++ ++NV+++ LCK GK DE+  +   M + +   + +TYSTL+ G C
Sbjct: 242 WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 301

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G ++ A  ++  M   G   D V YN ++NGY +   +EE L L++ M  +G + TVV
Sbjct: 302 GSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVV 360

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YN L  GLFE  +V+ A+ ++E +   D  AD+ TY   + GLCKNGY+ +A+ +    
Sbjct: 361 SYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEA 420

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + +LD  AY+ +I+GLC+ GRL+    +   + +     +    N +I+G     ++
Sbjct: 421 ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKL 480

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A   F +M      P V+ + TLI+G  +  + S+   L+ +M  K   P+    S++
Sbjct: 481 EDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLL 540

Query: 373 VDLL 376
           ++ L
Sbjct: 541 MNGL 544



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 200/364 (54%), Gaps = 2/364 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P   +YN++++ L +    D+A++ FL  +   ++P++ TYN LI   C    +++AK
Sbjct: 110 CQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAK 169

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M +QG  P V ++  +++ L KNG M +A +L D M +R V P+   Y+ L+DGF
Sbjct: 170 ELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGF 229

Query: 132 CLTGKINRAEELFGSMESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
              G I  A E++  +      + ++ SYN++ING CK  + +E+  ++  M        
Sbjct: 230 FKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQD 289

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           + TY+TL  GL     ++ A ++++EM  + V+ D   YNT ++G  + G I E +EL++
Sbjct: 290 LYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWK 349

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C   + +YN LI GL ++ +++ A+ ++  LP +   AD +TY +++HGLC +G
Sbjct: 350 VMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNG 408

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            ++KA  +  + E      +   + ++I+G  R  +  +V  +L +M +    P+  + +
Sbjct: 409 YLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCN 468

Query: 371 MVVD 374
            V++
Sbjct: 469 AVIN 472



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 193/391 (49%), Gaps = 34/391 (8%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G    PN  +YN +I+GLCK G  D++  ++ +MK      D+ TY++LIHGLC + + +
Sbjct: 248 GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLD 307

Query: 69  EAKRLFFEMMDQGVQP----------------------------------SVVTFNVIMD 94
            A R++ EM + GV P                                  +VV++N+++ 
Sbjct: 308 GATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIR 367

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            L +N K+DEA  + +L+ ++D   ++ TY  L+ G C  G +N+A  +    E+     
Sbjct: 368 GLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL 427

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D  +Y+ +ING C+   ++E   +  +M   G KP     N +  G     ++E AL+ F
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
             M          TYNT I+GL K     EA  L + +     + ++  Y+ L++GLC+ 
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            +L++AL L+     +    DV  +NI+IHGLC+ G+++ A  L+ +M++    PN++  
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            TL+ GF ++    +  ++   + +    PD
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQYGPQPD 638



 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 170/324 (52%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V+YN +I GL +   VD+A +++  +  ++   D +TY  L+HGLC     N+A  +  E
Sbjct: 360 VSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEE 419

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
             +         ++ +++ LC+ G++DE + +LD M +   +PN    + +++GF    K
Sbjct: 420 AENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASK 479

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +  A   FG+M S GC    V+YN LING  K +   EA +L +EM+ KG KP ++TY+ 
Sbjct: 480 LEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSL 539

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  GL +  +++ AL L+ +        D   +N  I GLC +G + +A++L+  +   K
Sbjct: 540 LMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRK 599

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
           C  ++  +N L++G  K    E A +++  + +     D+++YNI + GLC+  ++  A 
Sbjct: 600 CVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAV 659

Query: 317 DLFLDMEENAVAPNVIIFVTLIHG 340
               D  +  V P  I +  L+  
Sbjct: 660 GFLNDAVDRGVLPTAITWNILVRA 683



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 160/301 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +++TY  ++ GLCK G+++KA ++  + +    + D   Y+S+I+GLC     +E  
Sbjct: 390 CCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVA 449

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  +M   G +P+    N +++   +  K+++A R    MV +   P   TY+TL++G 
Sbjct: 450 GVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGL 509

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               + + A  L   M   G K + ++Y++L+NG C+ K+++ AL+L+ + + KG KP V
Sbjct: 510 SKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDV 569

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             +N +  GL    +VE AL+L+ EM++     +  T+NT ++G  K      A +++  
Sbjct: 570 KMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDH 629

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DI +YN  + GLC   R+  A+        R ++   +T+NI++  + ++G 
Sbjct: 630 ILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGA 689

Query: 312 M 312
           +
Sbjct: 690 L 690



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 82/244 (33%), Positives = 135/244 (55%), Gaps = 6/244 (2%)

Query: 3   NGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC 62
           NG G++      +T  Y+++I+GLC+EG +D+   +  QM      P+    N++I+G  
Sbjct: 422 NGRGDL------DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFV 475

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
            A+   +A R F  M+ +G  P+VVT+N +++ L K  +  EA  L+  M+ +  +PN  
Sbjct: 476 RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMI 535

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TYS LM+G C   K++ A  L+      G K D   +NI+I+G C + +VE+AL LY EM
Sbjct: 536 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 595

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
             +   P +VT+NTL  G +++   E A K+++ + +     D  +YN  + GLC    I
Sbjct: 596 KQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRI 655

Query: 243 VEAV 246
            +AV
Sbjct: 656 SDAV 659



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 151/302 (50%), Gaps = 4/302 (1%)

Query: 75  FEMMDQ--GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           F+ M +  G QP + ++N +++ L ++ K DEA           + PN  TY+ L+   C
Sbjct: 101 FQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISC 160

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              + ++A+EL   M   G   D  SY  LIN   KN  + +AL L+ EM  +G+ P V 
Sbjct: 161 RKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVA 220

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQR-DDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            YN L  G F+   + +A +++E + +   V  +  +YN  I+GLCK G   E+ E++  
Sbjct: 221 CYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHR 280

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +   D+  Y+ LI GLC SG L+ A  +++ +    +  DVV YN M++G    G+
Sbjct: 281 MKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 340

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++  +L+  ME+      V+ +  LI G     K  + I +   + EK    D+    +
Sbjct: 341 IEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGV 399

Query: 372 VV 373
           +V
Sbjct: 400 LV 401



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 147/317 (46%), Gaps = 37/317 (11%)

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           G   +   F+ I+  L     +   SR+++L+  +  +       T++  +      ++A
Sbjct: 38  GYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQA 97

Query: 141 EELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
            ++F  M E  GC+    SYN L+N   ++ + +EA S +    + G+ P + TYN L  
Sbjct: 98  LDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIK 157

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
                 Q + A +L   M     + D  +Y T I+ L KNGY+ +A++LF  +       
Sbjct: 158 ISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTP 217

Query: 260 DIQAYNCLID------------------------------------GLCKSGRLEIALEL 283
           D+  YN LID                                    GLCK G+ + + E+
Sbjct: 218 DVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEI 277

Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           +  + +     D+ TY+ +IHGLC  G +D A  ++ +M EN V+P+V+++ T+++G++R
Sbjct: 278 WHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLR 337

Query: 344 INKPSKVIELLHKMKEK 360
             +  + +EL   M+++
Sbjct: 338 AGRIEECLELWKVMEKE 354



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/198 (21%), Positives = 75/198 (37%), Gaps = 37/198 (18%)

Query: 170 KEVEEALSLYREMVS-KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
           K    ALS++  +    G   T   ++ +   LF+   V H  ++ E ++          
Sbjct: 21  KNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDV 80

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLG-ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
             T I    KN    +A+++F+ +  I  C+  I++YN L++ L +S             
Sbjct: 81  ALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESN------------ 128

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
                                  + D+A   FL  E   ++PN+  +  LI    R  + 
Sbjct: 129 -----------------------KWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQF 165

Query: 348 SKVIELLHKMKEKKVMPD 365
            K  ELL+ M E+   PD
Sbjct: 166 DKAKELLNWMWEQGFSPD 183


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 193/364 (53%), Gaps = 2/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY++II  L K   +DKA  +F +M    + PD + Y SL+HG C +    EA  +
Sbjct: 240 PDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGI 299

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M   GV+P VVT+  +MD LCKNGK  EA ++ D +V+R  +P++ TY TL+ G+  
Sbjct: 300 FKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYAT 359

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +    +L   M   G +     +N+++  Y K+ +V+EAL ++  M  +G+ P +V 
Sbjct: 360 EGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVN 419

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL-FRTL 252
           Y T+   L    +V+ AL  F  ++ + +A +   + T I GLC      +  EL F  +
Sbjct: 420 YGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMI 479

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C LD   +N ++  LCK GR+  A  LF  + R  +  +  TYN +I G C DG+M
Sbjct: 480 DRGIC-LDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKM 538

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A  L   M  N V P+ + + T+I+G+ +  +    + LL +M  K V P      M+
Sbjct: 539 DEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEML 598

Query: 373 VDLL 376
           +  L
Sbjct: 599 LQGL 602



 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 91/209 (43%), Positives = 132/209 (63%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V Y T++D LC  G VD A + F  +K E + P++V + +LIHGLC  + W++ + L
Sbjct: 415 PDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEEL 474

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            FEM+D+G+    + FN IM  LCK G++ EA  L DLMV+  + PN  TY+TL+DG+CL
Sbjct: 475 AFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCL 534

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A +L G M   G K  DV+YN +INGY +N  +E+ L+L REM  KG+ P +VT
Sbjct: 535 DGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVT 594

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           Y  L  GLF+  +   A +L+  M + D 
Sbjct: 595 YEMLLQGLFQAGRTVAAKELYLRMIKWDT 623



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 173/344 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + Y +++ G C  G   +A  +F +M    + PDVVTY +L+  LC      EA+++
Sbjct: 275 PDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKI 334

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  ++ +G +P   T+  ++      G + E   LLDLM+++ ++     ++ +M  +  
Sbjct: 335 FDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAK 394

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K++ A  +F +M   G   D V+Y  +++  C    V++ALS +  + S+G+ P +V 
Sbjct: 395 HNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVV 454

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           + TL  GL    + +   +L  EM    +  DT  +N  +  LCK G ++EA  LF  + 
Sbjct: 455 FTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMV 514

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  E +   YN LIDG C  G+++ A++L   +    +    VTYN +I+G   +G+++
Sbjct: 515 RIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIE 574

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
               L  +M+   V P ++ +  L+ G  +  +     EL  +M
Sbjct: 575 DGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 618



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 186/391 (47%), Gaps = 40/391 (10%)

Query: 14  PNTVTYNTIIDGLCK-------------------------------EGFVDKAKA----- 37
           PN  TY  +I G C+                               +G  D+ +      
Sbjct: 97  PNIATYGIVI-GCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMD 155

Query: 38  -LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD-QGVQP-SVVTFNVIMD 94
            +  +M      PD+ +Y  L+ GLC      +A  L   M D +G  P  VV +  +++
Sbjct: 156 IVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVIN 215

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            L + G++D+A  L D M+ R   P+  TYS+++     T  +++A ++F  M   G   
Sbjct: 216 GLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMP 275

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D + Y  L++GYC + + +EA+ ++++M   G++P VVTY  L   L +  +   A K+F
Sbjct: 276 DCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIF 335

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           + + +     D++TY T + G    G +VE  +L   +     +L    +N ++    K 
Sbjct: 336 DSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKH 395

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            +++ AL +F ++ ++ L  D+V Y  ++  LC  G++D A   F  ++   +APN+++F
Sbjct: 396 NKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVF 455

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            TLIHG    +K  KV EL  +M ++ +  D
Sbjct: 456 TTLIHGLCTCDKWDKVEELAFEMIDRGICLD 486



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 166/334 (49%), Gaps = 9/334 (2%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P++ TY  +I         + A      ++  G++ S + F+ ++  LC   +  +A   
Sbjct: 97  PNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDA--- 153

Query: 109 LDLMVQR----DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG--CKHDDVSYNIL 162
           +D++++R      +P+ F+Y+ L+ G C      +A +L   M      C  D V+Y  +
Sbjct: 154 MDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTV 213

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           ING  +  ++++A SL+  M+ +G  P VVTY+++   L +   ++ A ++F  M ++ V
Sbjct: 214 INGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGV 273

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
             D   Y + + G C +G   EA+ +F+ +     E D+  Y  L+D LCK+G+   A +
Sbjct: 274 MPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARK 333

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           +F SL +R    D  TY  ++HG   +G + + HDL   M +  +     IF  ++  + 
Sbjct: 334 IFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYA 393

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + NK  + + +   M+++ + PD      V+D+L
Sbjct: 394 KHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDIL 427



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 2/111 (1%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            IG+  +PNT TYNT+IDG C +G +D+A  L   M    + P  VTYN++I+G      
Sbjct: 515 RIGI--EPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGR 572

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV 117
             +   L  EM  +GV P +VT+ +++  L + G+   A  L   M++ D 
Sbjct: 573 IEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIKWDT 623


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 200/367 (54%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           IG    P+ V+YN +I G CK+G +D A  +   +    + P+ +TY  L+ G     D 
Sbjct: 458 IGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDC 517

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A  +F +M+  G+ P+  TFN I++ LCK G++ EA   L+  +++   P + TY+ +
Sbjct: 518 EHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCI 577

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DG+   G I+ AE ++  M       + ++Y  LING+CK+ +++ AL ++ +M  KG+
Sbjct: 578 IDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGL 637

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +  +  Y TL  G  ++  +E+A K F ++    +  +T  YN  I        +  A+ 
Sbjct: 638 ELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALN 697

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L + +   K   D++ Y  LIDGL K G+L  AL+L+  +  R +V D+  YN++I+GLC
Sbjct: 698 LHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLC 757

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           N GQ++ A  +  +M+ N + P V+++ TLI G  +     +   L  +M +K ++PD +
Sbjct: 758 NHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDT 817

Query: 368 IVSMVVD 374
              ++V+
Sbjct: 818 TYDILVN 824



 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 178/336 (52%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           NG I    KPN +TY  +++G  K+G  + A  +F QM    I P   T+NS+I+GLC  
Sbjct: 490 NGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKV 549

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
              +EA+      + Q   P+ +T+N I+D   K G +D A  +   M + ++ PN  TY
Sbjct: 550 GRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITY 609

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           ++L++GFC + K++ A ++   M+  G + D   Y  LI G+CK +++E A   + +++ 
Sbjct: 610 TSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLE 669

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
            G+ P  + YN +      ++ +E AL L +EM  + +  D   Y + IDGL K G +  
Sbjct: 670 VGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSF 729

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A++L+  +       DI  YN LI+GLC  G+LE A ++ + +    +   V+ YN +I 
Sbjct: 730 ALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIA 789

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           G   +G + +A  L  +M +  + P+   +  L++G
Sbjct: 790 GHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 190/407 (46%), Gaps = 36/407 (8%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           +  G+ E+G V  P+  TY  +I    + G   +A  L  +M    +  +V    SLI G
Sbjct: 279 LVEGDEELGWV--PSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKG 336

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
            C   D N A RLF E+++ GV P+V  F+V+++   K G +++A+ L   M    ++P 
Sbjct: 337 YCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPT 396

Query: 121 AFTYSTLMDGF----------------------------------CLTGKINRAEELFGS 146
            F  + L+ GF                                  C  GK+N A  L+  
Sbjct: 397 VFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDK 456

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M   G     VSYN +I G+CK   +++A  +   ++  G+KP  +TY  L  G F+   
Sbjct: 457 MIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGD 516

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
            EHA  +F++M    +     T+N+ I+GLCK G + EA +   T            YNC
Sbjct: 517 CEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNC 576

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           +IDG  K G ++ A  ++R + R  +  +V+TY  +I+G C   +MD A  +  DM+   
Sbjct: 577 IIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKG 636

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +  ++ ++ TLI GF ++       +   K+ E  + P+  + ++++
Sbjct: 637 LELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMI 683



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 183/427 (42%), Gaps = 73/427 (17%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T   ++    K G   +A+  F Q  G  +  D  +Y+ +I  +C  +D + A +L    
Sbjct: 224 TLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGD 283

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
            + G  PS  T+  ++    + G   EA RL D MV   V  N    ++L+ G+C+ G +
Sbjct: 284 EELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDV 343

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT------- 190
           N A  LF  +  +G   +   +++LI    K   VE+A  LY  M   G++PT       
Sbjct: 344 NSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFL 403

Query: 191 ---------------------------VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVA 223
                                      VVTYN + L L E+ +V  A  L+++M    + 
Sbjct: 404 LKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGIT 463

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQA-------------------- 263
               +YN  I G CK G + +A E+    GI++  L   A                    
Sbjct: 464 PSLVSYNHMILGHCKKGCMDDAHEVMN--GIIESGLKPNAITYTILMEGSFKKGDCEHAF 521

Query: 264 -----------------YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
                            +N +I+GLCK GR+  A +   +  ++  +   +TYN +I G 
Sbjct: 522 NMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGY 581

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             +G +D A  ++ +M  + ++PNVI + +LI+GF + NK    +++   MK K +  D 
Sbjct: 582 VKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDI 641

Query: 367 SIVSMVV 373
           ++ + ++
Sbjct: 642 TVYATLI 648



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 141/321 (43%), Gaps = 3/321 (0%)

Query: 50  DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
           D   +N L+     AN   EA   F  M++ GV P V   NV++  + +   +++A RL 
Sbjct: 151 DSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLF 210

Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
           D M +R +  + +T   LM      GK   AE  FG     G K D  SY+I+I   C+ 
Sbjct: 211 DEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRG 270

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
            +++ A  L       G  P+  TY  +      +     AL+L +EM    V  + +  
Sbjct: 271 SDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVA 330

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
            + I G C  G +  A+ LF  +  +    ++  ++ LI+   K G +E A EL+  +  
Sbjct: 331 TSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKC 390

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
             L   V   N ++ G      ++ A+ L     EN +A +V+ +  ++     + K ++
Sbjct: 391 MGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWLCELGKVNE 449

Query: 350 VIELLHKMKEKKVMPDASIVS 370
              L  KM  K + P  S+VS
Sbjct: 450 ACNLWDKMIGKGITP--SLVS 468



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 98/220 (44%)

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D   +N L+  Y +  ++ EA+  +R M+  G+ P V   N L   +   + VE A +LF
Sbjct: 151 DSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLF 210

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           +EM    +  D  T    +    K G  VEA   F        +LD  +Y+ +I  +C+ 
Sbjct: 211 DEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRG 270

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
             L++A +L         V    TY  +I      G   +A  L  +M ++ V  NV + 
Sbjct: 271 SDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVA 330

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +LI G+      +  + L  ++ E  V P+ +I S++++
Sbjct: 331 TSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIE 370


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 198/366 (54%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC P++VT+ ++IDGL + G V+ A  L+ +M      P+ V Y SLI          + 
Sbjct: 476 VCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDG 535

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            +++ EMM +G  P ++  N  MD + K G++++   L + +  + + P+  +YS L+ G
Sbjct: 536 HKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHG 595

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               G      +LF  M+  G   D  +YNI+I+G+CK+ +V +A  L  EM +KG++PT
Sbjct: 596 LVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPT 655

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY ++  GL +I +++ A  LFEE +   V  +   Y++ IDG  K G I EA  +  
Sbjct: 656 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILE 715

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            L       +   +NCL+D L K+  ++ AL  F+++       + VTY+IM++GLC   
Sbjct: 716 ELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVR 775

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           + +KA   + +M++  + PN I + T+I G  R+    +  +L  + K    +PD++  +
Sbjct: 776 KFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYN 835

Query: 371 MVVDLL 376
            +++ L
Sbjct: 836 AMIEGL 841



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 198/365 (54%), Gaps = 1/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ + YN I+  L ++G V++A  +   MK  +  P++ +YN LI  LC A +   A 
Sbjct: 373 CIPSVIAYNCILTCLGRKGKVEEALRILEAMK-MDAAPNLTSYNILIDMLCKAGELEAAL 431

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++   M + G+ P+++T N+++D LCK  ++DEA  +   +  +   P++ T+ +L+DG 
Sbjct: 432 KVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGL 491

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GK+N A  L+  M   G   + V Y  LI  + K    E+   +Y+EM+ +G  P +
Sbjct: 492 GRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDL 551

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +  N     +F+  ++E    LFEE++   +  D  +Y+  I GL K G+  +  +LF  
Sbjct: 552 MLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYE 611

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +      LD +AYN +IDG CKSG++  A +L   +  + L   VVTY  +I GL    +
Sbjct: 612 MKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDR 671

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A+ LF + +  AV  NV+++ +LI GF ++ +  +   +L ++ +K + P+    + 
Sbjct: 672 LDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNC 731

Query: 372 VVDLL 376
           ++D L
Sbjct: 732 LLDAL 736



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 185/363 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  +YN +ID LCK G ++ A  +   MK   + P+++T N +I  LC A   +EA  +
Sbjct: 409 PNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSI 468

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  +  +   P  VTF  ++D L ++GK+++A  L + M+     PNA  Y++L+  F  
Sbjct: 469 FLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFK 528

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+     +++  M   GC  D +  N  ++   K  E+E+  +L+ E+ ++G+ P V +
Sbjct: 529 CGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRS 588

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  GL +    +   KLF EM+   +  DT  YN  IDG CK+G + +A +L   + 
Sbjct: 589 YSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMK 648

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +  +  Y  +IDGL K  RL+ A  LF     + +  +VV Y+ +I G    G++D
Sbjct: 649 TKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRID 708

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A+ +  ++ +  + PN   +  L+   V+  +  + +     MK  K  P+    S++V
Sbjct: 709 EAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMV 768

Query: 374 DLL 376
           + L
Sbjct: 769 NGL 771



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 166/314 (52%), Gaps = 3/314 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +  N  +D + K G ++K +ALF ++K + + PDV +Y+ LIHGL       +  
Sbjct: 547 CSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTY 606

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +LF+EM +QG+      +N+++D  CK+GK+++A +LL+ M  + ++P   TY +++DG 
Sbjct: 607 KLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGL 666

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +++ A  LF   +S     + V Y+ LI+G+ K   ++EA  +  E++ KG+ P  
Sbjct: 667 AKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNT 726

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+N L   L +  +++ AL  F+ M+      +  TY+  ++GLCK     +A   ++ 
Sbjct: 727 YTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQE 786

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + +   Y  +I GL + G +  A +LF        + D   YN MI GL N   
Sbjct: 787 MQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSN--- 843

Query: 312 MDKAHDLFLDMEEN 325
            +KA D ++  EE 
Sbjct: 844 ANKAMDAYILFEET 857



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 150/266 (56%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +T  YN +IDG CK G V+KA  L  +MK + + P VVTY S+I GL   +  +EA  LF
Sbjct: 620 DTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLF 679

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            E   + V  +VV ++ ++D   K G++DEA  +L+ ++Q+ + PN +T++ L+D     
Sbjct: 680 EEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKA 739

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            +I+ A   F +M+++ C  ++V+Y+I++NG CK ++  +A   ++EM  +G+KP  +TY
Sbjct: 740 EEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITY 799

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            T+  GL  +  V  A  LFE  +      D++ YN  I+GL      ++A  LF    +
Sbjct: 800 TTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRL 859

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIA 280
             C +  +    L+D L K+  LE A
Sbjct: 860 KGCRIYSKTCVVLLDALHKADCLEQA 885



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 172/360 (47%), Gaps = 1/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T   ++    K   + +A  +   M+     P    Y +LI  L  A++ +    L
Sbjct: 165 PSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTL 224

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M + G + +V  F  ++    + G++D A  LLD M       +   Y+  +D F  
Sbjct: 225 LRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGK 284

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A + F  ++S G   DDV++  +I   CK + V+EA+ L+ E+ S    P V  
Sbjct: 285 VGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYA 344

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+ +G   + +   A  L E  +R         YN  +  L + G + EA+ +   + 
Sbjct: 345 YNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMK 404

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +    ++ +YN LID LCK+G LE AL++  S+    L  +++T NIMI  LC   ++D
Sbjct: 405 -MDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLD 463

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  +FL ++     P+ + F +LI G  R  K +    L  KM +    P+A + + ++
Sbjct: 464 EACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLI 523



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 171/362 (47%), Gaps = 1/362 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P    Y T+I  L      D    L  QM+       V  + +LI         + A  
Sbjct: 199 RPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALS 258

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM        +V +NV +D   K GK+D A +    +  + + P+  T+++++   C
Sbjct: 259 LLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLC 318

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +++ A ELF  ++S        +YN +I GY    +  EA SL      KG  P+V+
Sbjct: 319 KAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVI 378

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN +   L    +VE AL++ E M+  D A + ++YN  ID LCK G +  A+++  ++
Sbjct: 379 AYNCILTCLGRKGKVEEALRILEAMKM-DAAPNLTSYNILIDMLCKAGELEAALKVQDSM 437

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +I   N +ID LCK+ RL+ A  +F  L  +V   D VT+  +I GL   G++
Sbjct: 438 KEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKV 497

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A+ L+  M ++   PN +++ +LI  F +  +     ++  +M  +   PD  +++  
Sbjct: 498 NDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNY 557

Query: 373 VD 374
           +D
Sbjct: 558 MD 559



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 113/226 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VTY ++IDGL K   +D+A  LF + K + ++ +VV Y+SLI G       +EA  
Sbjct: 653 QPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYL 712

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  E+M +G+ P+  T+N ++D L K  ++DEA      M      PN  TYS +++G C
Sbjct: 713 ILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLC 772

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K N+A   +  M+  G K + ++Y  +I+G  +   V EA  L+    S G  P   
Sbjct: 773 KVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSA 832

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
            YN +  GL   ++   A  LFEE +       + T    +D L K
Sbjct: 833 CYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHK 878



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 148/324 (45%), Gaps = 1/324 (0%)

Query: 53  TYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM 112
            YN+L+  +    +    +++  EM   G  PS  T   ++    K+ K+ EA  +++ M
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM 193

Query: 113 VQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
            +   RP    Y+TL+       + +    L   M+ +G +     +  LI  + +   V
Sbjct: 194 RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           + ALSL  EM S      +V YN       ++ +V+ A K F E++   +  D  T+ + 
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSM 313

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           I  LCK   + EAVELF  L   K    + AYN +I G    G+   A  L     R+  
Sbjct: 314 IGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGC 373

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
           +  V+ YN ++  L   G++++A  +   M+ +A APN+  +  LI    +  +    ++
Sbjct: 374 IPSVIAYNCILTCLGRKGKVEEALRILEAMKMDA-APNLTSYNILIDMLCKAGELEAALK 432

Query: 353 LLHKMKEKKVMPDASIVSMVVDLL 376
           +   MKE  + P+   V++++D L
Sbjct: 433 VQDSMKEAGLFPNIITVNIMIDRL 456



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/211 (21%), Positives = 88/211 (41%)

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
           H   +YN L+    + + +E    +  EM   G  P+  T   +     +  ++  A  +
Sbjct: 130 HSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGV 189

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
            E M++       S Y T I  L         + L R +  +  E+ +  +  LI    +
Sbjct: 190 IETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAR 249

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
            GR++ AL L   +      AD+V YN+ I      G++D A   F +++   + P+ + 
Sbjct: 250 EGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVT 309

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           F ++I    +  +  + +EL  ++   K +P
Sbjct: 310 FTSMIGVLCKAERVDEAVELFEELDSNKSVP 340



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 59/120 (49%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY+ +++GLCK    +KA   + +M+ + + P+ +TY ++I GL    +  EAK
Sbjct: 757 CPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAK 816

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF      G  P    +N +++ L    K  +A  L +    +  R  + T   L+D  
Sbjct: 817 DLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDAL 876



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 54/94 (57%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPNT+TY T+I GL + G V +AK LF + K     PD   YN++I GL +AN   +A  
Sbjct: 793 KPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYI 852

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           LF E   +G +    T  V++D L K   +++A+
Sbjct: 853 LFEETRLKGCRIYSKTCVVLLDALHKADCLEQAA 886


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 188/350 (53%), Gaps = 3/350 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+   YN +IDG+CKEG ++ A  L  +M    ++P+VV+Y+ +I+ LC + +   A  
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFA 300

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF +M  +G   ++ TF  ++      GK+ EA  L  LM+Q    PN   Y+TL+ G C
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A ++   M+  GC  +  +Y+ILI+G+ K+ ++  A   +  M+S G +P VV
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  +   L +    + A  L E+M  +    +T T+NTFI GLC NG +  A++L   +
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  +I  YN L+D L +  + E A  LF+ +  R L  ++VTYN +++G    G M
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMM 540

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK---PSKVIELLHKMKE 359
            +A  LF        AP+ I + T+IH + +  K    ++++E +  MKE
Sbjct: 541 GEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKE 590



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/371 (32%), Positives = 185/371 (49%), Gaps = 7/371 (1%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE G  CKP    YN ++D L  E        L+  MK + + P+V TYN L+  LC  +
Sbjct: 136 GEFG--CKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKND 193

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             + A +LF EM ++G  P  VT+  ++  LCK GK+D+A  L         +P+   Y+
Sbjct: 194 RVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAG-----RFKPSVPVYN 248

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+DG C  G+I  A +L G M   G   + VSY+ +IN  C +  VE A +L+ +M  +
Sbjct: 249 ALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLR 308

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G    + T+  L  G F   ++  AL L++ M +D    +   YNT I GLC NG + EA
Sbjct: 309 GCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEA 368

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           +++   +    C  ++  Y+ LIDG  KSG L  A E +  +       +VVTY  M+  
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC +   D+A+ L   M      PN + F T I G     +    ++LL +M+    +P+
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPN 488

Query: 366 ASIVSMVVDLL 376
            +  + ++D L
Sbjct: 489 ITTYNELLDAL 499



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 176/365 (48%), Gaps = 38/365 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENIN----------------------- 48
           PN V+Y+ II+ LC  G V+ A ALF QM  +G + N                       
Sbjct: 277 PNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDL 336

Query: 49  ----------PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                     P+VV YN+LIHGLC      EA ++  +M   G  P+V T+++++D   K
Sbjct: 337 WKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAK 396

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           +G +  AS   + M+    RPN  TY+ ++D  C     ++A  L   M   GC  + ++
Sbjct: 397 SGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMT 456

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +N  I G C N  VE A+ L   M   G  P + TYN L   LF +++ E A  LF+E++
Sbjct: 457 FNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIE 516

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
             ++  +  TYNT + G  + G + EA++LF    +     D   YN +I   CK G+++
Sbjct: 517 ARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVK 576

Query: 279 IALELF-RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN-AVAPNVIIFVT 336
           IA +L  R    +    D++TY  +I G CN   +++A   FLD   N  + PN   +  
Sbjct: 577 IAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAM-AFLDKAINQGICPNFATWNA 635

Query: 337 LIHGF 341
           L+  F
Sbjct: 636 LVRCF 640



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 2/309 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN V YNT+I GLC  G +++A  +  QM+     P+V TY+ LI G   + D   A 
Sbjct: 345 CEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGAS 404

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             +  M+  G +P+VVT+  ++D LCKN   D+A+ L++ M      PN  T++T + G 
Sbjct: 405 ETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGL 464

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++  A +L   M+  GC  +  +YN L++   +  + EEA  L++E+ ++ ++P +
Sbjct: 465 CGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNL 524

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNT+  G      +  AL+LF +      A D+ TYNT I   CK G +  A +L   
Sbjct: 525 VTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVER 584

Query: 252 LGILK-CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND- 309
           +  +K    DI  Y  LI G C    +E A+        + +  +  T+N ++    +  
Sbjct: 585 VSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSL 644

Query: 310 GQMDKAHDL 318
           G M   H L
Sbjct: 645 GHMGPIHIL 653



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 185/359 (51%), Gaps = 5/359 (1%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY  +I+ L +E  +D  + +  QMK + IN     +  +I+G        +A ++F+ +
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
            + G +P+V  +N ++D L    K    + L   M +  + PN FTY+ L+   C   ++
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A +LF  M + GC  D V+Y  +++  CK  ++++A    RE+  +  KP+V  YN L
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA----RELAGR-FKPSVPVYNAL 250

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G+ +  ++E A+KL  EM  + V  +  +Y+  I+ LC +G +  A  LF  + +  C
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           + +I  +  LI G    G+L  AL+L++ + +     +VV YN +IHGLC++G +++A  
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +   M+ +   PNV  +  LI GF +        E  ++M      P+    + +VD+L
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVL 429



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 146/327 (44%), Gaps = 40/327 (12%)

Query: 83  QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEE 142
           Q +  T+ V+++ L +  +MD    +L  M    +      +  +++G+   G   +A +
Sbjct: 71  QHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALK 130

Query: 143 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 202
           +F  +   GCK     YN L++      + +    LY  M   G+ P V TYN L   L 
Sbjct: 131 MFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALC 190

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ 262
           +  +V+ A KLF EM       D  TY T +  LCK G I +A EL    G  K  + + 
Sbjct: 191 KNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL---AGRFKPSVPV- 246

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
            YN LIDG+CK GR+E+A++L   +    +  +VV+Y+ +I+ LC  G ++ A  LF  M
Sbjct: 247 -YNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQM 305

Query: 323 E-----------------------------------ENAVAPNVIIFVTLIHGFVRINKP 347
                                               ++   PNV+ + TLIHG       
Sbjct: 306 FLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSL 365

Query: 348 SKVIELLHKMKEKKVMPDASIVSMVVD 374
            + +++  +M+    +P+ +  S+++D
Sbjct: 366 EEALQVCDQMQRSGCLPNVTTYSILID 392



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 91/191 (47%), Gaps = 5/191 (2%)

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
           S   + T  TY  +   L    +++    + ++M+ D +      +   I+G  + G   
Sbjct: 67  SNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAE 126

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           +A+++F  +G   C+  ++ YN L+D L    + ++   L+ ++ +  L+ +V TYNI++
Sbjct: 127 QALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILL 186

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
             LC + ++D AH LF++M      P+ + + T++    +  K     EL  + K     
Sbjct: 187 KALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK----- 241

Query: 364 PDASIVSMVVD 374
           P   + + ++D
Sbjct: 242 PSVPVYNALID 252


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 203/385 (52%), Gaps = 22/385 (5%)

Query: 12  CKPNTVTYNTIIDGLCK-----EGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           C+P  V YN +I G+C      +  +D A+  + +M    +  + V  ++    LC    
Sbjct: 143 CQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGK 202

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           + +A  +  EMM +G  P   T++ ++  LC   K+++A +L   M +  + P+ + Y+T
Sbjct: 203 FEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTT 262

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+D FC  G I +A   F  ME  GC  + V+Y  LI+ Y K+++V +A  +Y  M+SKG
Sbjct: 263 LIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKG 322

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV-----------------AADTSTY 229
             P +VTY  L  GL +  ++E A ++++ M++++V                   +  TY
Sbjct: 323 CTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTY 382

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
              +DGLCK   + EA +L +++ +  CE +   Y+ LIDG CK+G+L+ A E+F ++  
Sbjct: 383 GALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLE 442

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
                +V TY+ +I  L  D ++D A  +   M EN+ APNV+I+  +I G  ++ K  +
Sbjct: 443 CGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 502

Query: 350 VIELLHKMKEKKVMPDASIVSMVVD 374
             +L+  M+EK   P+    + ++D
Sbjct: 503 AYKLMVMMEEKGCNPNVVTYTAMID 527



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/348 (33%), Positives = 178/348 (51%), Gaps = 4/348 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G   +PN  TY  ++DGLCK   V +A+ L   M  E   P+ V Y++LI G C A   +
Sbjct: 372 GASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLD 431

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA+ +F  M++ G  P+V T++ ++D L K+ ++D A ++L  M++    PN   Y+ ++
Sbjct: 432 EAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMI 491

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C  GK + A +L   ME  GC  + V+Y  +I+G+ K+  VE+ L L ++M SKG  
Sbjct: 492 DGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCA 551

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  VTY  L         ++ A KL EEM++       + Y   I+G   N   + ++ L
Sbjct: 552 PNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGF--NREFIASLYL 609

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP--RRVLVADVVTYNIMIHGL 306
              +           Y  LID   K+GRLEIALEL   L        A+   +  +I  L
Sbjct: 610 SFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENL 669

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
               + DKA +L+ DM      P + I V LI G +R+N+  + ++LL
Sbjct: 670 SLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLL 717



 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 184/383 (48%), Gaps = 22/383 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TV Y  +I GLC+    ++A     +M+  +  P+V+TY  L+ G  +       KR+
Sbjct: 40  PDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRI 99

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+ +G  PS   FN ++   C++G    A +LL  MVQ   +P    Y+ L+ G C 
Sbjct: 100 LSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICS 159

Query: 134 T---GK--INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +   GK  ++ AE+ +G M   G   + V+ +      C   + E+A ++ REM+SKG  
Sbjct: 160 SEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFI 219

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P   TY+ +   L    +VE A +LF+EM+R+ +A D   Y T ID  CK G+I +A   
Sbjct: 220 PDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNW 279

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +    C  ++  Y  LI    KS ++  A E++  +  +    ++VTY  +I GLC 
Sbjct: 280 FDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCK 339

Query: 309 DGQMDKAHDLFLDMEENAV-----------------APNVIIFVTLIHGFVRINKPSKVI 351
            G+++KA  ++  M++  V                  PNV  +  L+ G  +  +  +  
Sbjct: 340 AGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEAR 399

Query: 352 ELLHKMKEKKVMPDASIVSMVVD 374
           +LL  M  +   P+  +   ++D
Sbjct: 400 DLLKSMSVEGCEPNHVVYDALID 422



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 139/337 (41%), Gaps = 37/337 (10%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD-------------------------- 110
           M   G +    T       LCK+GK  EA  LL+                          
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEKEEFVPDTVLYTKMISGLCEASLFEE 60

Query: 111 ------LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
                  M      PN  TY  L+ G     K+ R + +   M + GC      +N L++
Sbjct: 61  AMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVH 120

Query: 165 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ-----VEHALKLFEEMQR 219
            YC++ +   A  L ++MV  G +P  V YN L  G+    +     ++ A K + EM  
Sbjct: 121 AYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLE 180

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
             V  +    + F   LC  G   +A  + R +       D   Y+ +I  LC + ++E 
Sbjct: 181 AGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEK 240

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A +LF+ + R  +  DV  Y  +I   C  G +++A + F +ME +  APNV+ +  LIH
Sbjct: 241 AFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIH 300

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +++  K SK  E+   M  K   P+    + ++D L
Sbjct: 301 AYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGL 337



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 109/242 (45%), Gaps = 37/242 (15%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN V Y  +IDGLCK G  D+A  L + M+ +  NP+VVTY ++I G   +    +  
Sbjct: 480 CAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCL 539

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ----------------- 114
            L  +M  +G  P+ VT+ V+++  C  G +DEA +LL+ M Q                 
Sbjct: 540 ELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGF 599

Query: 115 ----------------RDVRPNAFTYSTLMDGFCLTGKINRAEEL---FGSMESMGCKHD 155
                            D  P A  Y  L+D F   G++  A EL     S       + 
Sbjct: 600 NREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQ 659

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
           ++   ++ N    +K  ++A  LY +M+S+G  P +     L  GL  +++ E AL+L +
Sbjct: 660 NIHITLIENLSLAHK-ADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLLD 718

Query: 216 EM 217
            +
Sbjct: 719 SI 720


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 121/363 (33%), Positives = 176/363 (48%), Gaps = 6/363 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN ++Y  ++  LC+ G +DKA +   +M  E + PDV TYN +I  LC A   + A 
Sbjct: 6   CKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAI 65

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             FFE M    +P VVT+N ++  LCKNG++ +A  L   M    + P+  TY+TL+D F
Sbjct: 66  E-FFETMP---EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVF 121

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +   A  L   M S  C     SY  +ING CKN++V++A  L+ EM   G KP  
Sbjct: 122 CKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDR 181

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  GL    ++  A  L   M  +    D  T+   I+GLC    I EA  LF+ 
Sbjct: 182 VTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQG 241

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  D+  +  L+  LC   +L  AL + R+ P       V+ Y  +   L     
Sbjct: 242 MAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYP--ACPEAVILYTPIFRELGRRRG 299

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D+A  L   M    VAPNV+ +     G     +  +      +M E+ + PD    ++
Sbjct: 300 FDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNV 359

Query: 372 VVD 374
           +VD
Sbjct: 360 LVD 362



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 181/393 (46%), Gaps = 37/393 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN +ID LCK   + +A   F  M      PDVVTYN+L+ GLC      +A  L
Sbjct: 43  PDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSL 98

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   G+ PS VT+  ++D  CK  + + A  LL LM  R   P  ++Y ++++G C 
Sbjct: 99  FGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCK 158

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+++A +LF  M+  GCK D V+YN LI+G C  + + EA  L   MV    +P  +T
Sbjct: 159 NRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKIT 218

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE------ 247
           +  L  GL    +++ A  LF+ M +   A D  T+   +  LC    +  A+       
Sbjct: 219 FTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYP 278

Query: 248 -----------LFRTLGILK----------------CELDIQAYNCLIDGLCKSGRLEIA 280
                      +FR LG  +                   ++  Y     GL        A
Sbjct: 279 ACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRA 338

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
              FR +  + +  D+V YN+++ G C   ++D A  +   M+++ + PN++ + TL+  
Sbjct: 339 YREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGH 398

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
             R  K   + ELLH M  +   PD +  S +V
Sbjct: 399 HCRKGKVEAIGELLHTMVSRGRQPDVATWSTLV 431



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 180/369 (48%), Gaps = 37/369 (10%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYN----------------- 55
           +P+ VTYNT++ GLCK G V +A +LF  M+G  I P  VTY                  
Sbjct: 73  EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYG 132

Query: 56  ------------------SLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
                             S+I+GLC     ++A +LF EM   G +P  VT+N ++  LC
Sbjct: 133 LLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLC 192

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
              ++ EA  LL +MV+   +P+  T++ L++G C T +I  A  LF  M   GC  D V
Sbjct: 193 VKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLV 252

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           ++ +L++  C  +++  ALS+ R          V+ Y  +F  L      + A +L ++M
Sbjct: 253 THTVLVSKLCIRRKLRPALSVVRNY--PACPEAVILYTPIFRELGRRRGFDRAARLLQKM 310

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
            R  VA +  TY  F  GL      + A   FR +     E D+ AYN L+DG CK+ RL
Sbjct: 311 ARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRL 370

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           ++A ++ R + +  L  ++VTYN ++   C  G+++   +L   M      P+V  + TL
Sbjct: 371 DMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTL 430

Query: 338 IHGFVRINK 346
           + G  R+ +
Sbjct: 431 VAGLFRVGQ 439



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 137/262 (52%), Gaps = 4/262 (1%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           +  Q  +P+ +++  ++  LC+ GK+D+A   +  M +  + P+ FTY+ ++D  C   +
Sbjct: 1   IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 60

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           I+RA E F +M     + D V+YN L+ G CKN  V +A SL+  M   GI P+ VTY T
Sbjct: 61  ISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTT 116

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L     ++ Q E A  L + M     +    +Y + I+GLCKN  + +A +LF  + +  
Sbjct: 117 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 176

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
           C+ D   YN LI GLC   RL  A +L   +       D +T+  +I GLC   ++ +A 
Sbjct: 177 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAF 236

Query: 317 DLFLDMEENAVAPNVIIFVTLI 338
            LF  M +   AP+++    L+
Sbjct: 237 VLFQGMAKQGCAPDLVTHTVLV 258



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 130/265 (49%), Gaps = 4/265 (1%)

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           +  +D +PNA +Y  L+   C TGKI++A      M       D  +YN++I+  CK + 
Sbjct: 1   IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 60

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           +  A+  +  M     +P VVTYNTL  GL +  +V  A  LF  M+   +     TY T
Sbjct: 61  ISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTT 116

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            ID  CK      A  L + +   KC   + +Y  +I+GLCK+ +++ A +LF  +    
Sbjct: 117 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 176

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
              D VTYN +IHGLC   ++ +A DL   M EN+  P+ I F  LI G    ++  +  
Sbjct: 177 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAF 236

Query: 352 ELLHKMKEKKVMPDASIVSMVVDLL 376
            L   M ++   PD    +++V  L
Sbjct: 237 VLFQGMAKQGCAPDLVTHTVLVSKL 261



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 6/179 (3%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE- 69
            C    + Y  I   L +    D+A  L  +M    + P+VVTY +   GL    DW E 
Sbjct: 279 ACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGL---GDWKEG 335

Query: 70  --AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A R F  M++QG++P +V +NV++D  CK  ++D A +++  M Q  + PN  TY+TL
Sbjct: 336 MRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTL 395

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           +   C  GK+    EL  +M S G + D  +++ L+ G  +  +V+ A S     +S+G
Sbjct: 396 VGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 201/405 (49%), Gaps = 39/405 (9%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNS----------- 56
           +G  C  N +TYNT+I G CK G +++A  L  +MK    +PDVVT++S           
Sbjct: 97  LGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNL 156

Query: 57  ----------------------LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
                                 L+HGLC AN  +EA+++  EM ++G+ P VVT+N ++D
Sbjct: 157 SRAMQYFRESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLID 216

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            LCK+ +M+EA +LL+ MV+R VRPN  TY+TL+ G+C TG    A +L   M   G   
Sbjct: 217 GLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHP 276

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D V++N LI+G+C+  ++++A  +   M      P +VTYN L  GL +  +   A +L 
Sbjct: 277 DVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELL 336

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGL 271
            EM    +  D  TYN+ I   C+N  I +A ++   +   G++    D  +Y  L   L
Sbjct: 337 SEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIP---DGISYCTLAVAL 393

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
            KS R + A  L  ++     + ++ T+N ++ GLC   ++D+A  L   M      P  
Sbjct: 394 LKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAA 453

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +  L+ G  +  +     E+L  M  + + P  S    +V  L
Sbjct: 454 STYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTL 498



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 113/338 (33%), Positives = 181/338 (53%), Gaps = 2/338 (0%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           V C P++V +N ++ GLCK   + +A+ +  +M    I PDVVTYNSLI GLC +    E
Sbjct: 167 VECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEE 226

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A++L   M+ + V+P++VT+N ++   CK G    A +L++ M+Q    P+  T+++L+ 
Sbjct: 227 ARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLIS 286

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GFC   KI++A E+   M+   C  + V+YN+LI+G C      EA  L  EM  +GI P
Sbjct: 287 GFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILP 346

Query: 190 TVVTYNTLFLGLF-EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
            ++TYN+L +G+F    Q+E A ++   M    V  D  +Y T    L K+    EA  L
Sbjct: 347 DIITYNSL-IGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFAL 405

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +       ++  +N L++GLC S RL+ A  L   + R        TY +++ GLC 
Sbjct: 406 LDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCK 465

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
            G++D A ++ + M    + P V    T++H   R  K
Sbjct: 466 AGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGK 503



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 173/327 (52%), Gaps = 5/327 (1%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E G+V  P+ VTYN++IDGLCK   +++A+ L   M    + P++VTYN+LI+G C    
Sbjct: 201 ERGIV--PDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGC 258

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
              A +L   M+  G  P VVTFN ++   C+  K+D+A  +L LM +    PN  TY+ 
Sbjct: 259 TGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNV 318

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ G C  G+ N A EL   M+  G   D ++YN LI  +C+N ++E+A  +   MV +G
Sbjct: 319 LISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERG 378

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P  ++Y TL + L +  + + A  L + M       +  T+N+ ++GLC +  + EA 
Sbjct: 379 VIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEAR 438

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            L   +  + C+     Y  L+ GLCK+GR++ A E+   +    +   V +   ++H L
Sbjct: 439 HLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTL 498

Query: 307 CNDGQMDKA---HDLFLDMEENAVAPN 330
             +G+ D A    D  +  E  A  P+
Sbjct: 499 AREGKQDLALHYFDQVVAAESKACDPS 525



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 178/352 (50%), Gaps = 3/352 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFL-QMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           N  T N ++  L K     +A  +F  ++ G++ + + +TYN+LI G C A D   A +L
Sbjct: 68  NNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQL 127

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM ++G  P VVT + I+  LC  G +  A +     V+    P++  ++ L+ G C 
Sbjct: 128 LAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNILVHGLCK 185

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +++ A ++   M   G   D V+YN LI+G CK+  +EEA  L   MV + ++P +VT
Sbjct: 186 ANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVT 245

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G  +      A +L E M +     D  T+N+ I G C+   I +A E+   + 
Sbjct: 246 YNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMK 305

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  ++  YN LI GLC +GR   A EL   +  R ++ D++TYN +I   C + Q++
Sbjct: 306 KGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIE 365

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A  +   M E  V P+ I + TL    ++  +  +   LL  M +   +P+
Sbjct: 366 QAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPN 417



 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 121/224 (54%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +C PN VTYN +I GLC  G  ++A  L  +M G  I PD++TYNSLI   C      +A
Sbjct: 308 LCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQA 367

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            ++   M+++GV P  +++  +   L K+ + DEA  LLD M      PN FT+++LM+G
Sbjct: 368 FQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEG 427

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C + +++ A  L   M  +GC     +Y +L+ G CK   V++A  +   MVS+GI+P 
Sbjct: 428 LCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPL 487

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           V +  T+   L    + + AL  F+++   +  A   +Y   ++
Sbjct: 488 VSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLLE 531


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 195/364 (53%), Gaps = 2/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +Y T+I+ L K G++  A  LF +M    + PDV  YN LI G     D   A  +
Sbjct: 182 PDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI 241

Query: 74  FFEMMD-QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  ++    V P++ ++NV+++ LCK GK DE+  +   M + +   + +TYSTL+ G C
Sbjct: 242 WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 301

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G ++ A  ++  M   G   D V YN ++NGY +   +EE L L++ M  +G + TVV
Sbjct: 302 GSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVV 360

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YN L  GLFE  +V+ A+ ++E +   D  AD+ TY   + GLCKNGY+ +A+ +    
Sbjct: 361 SYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEA 420

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + +LD  AY+ +I+GLC+ GRL+    +   + +     +    N +I+G     ++
Sbjct: 421 ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKL 480

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A   F +M      P V+ + TLI+G  +  + S+   L+ +M  K   P+    S++
Sbjct: 481 EDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLL 540

Query: 373 VDLL 376
           ++ L
Sbjct: 541 MNGL 544



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 200/364 (54%), Gaps = 2/364 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P   +YN++++ L +    D+A++ FL  +   ++P++ TYN LI   C    +++AK
Sbjct: 110 CQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAK 169

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M +QG  P V ++  +++ L KNG M +A +L D M +R V P+   Y+ L+DGF
Sbjct: 170 ELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGF 229

Query: 132 CLTGKINRAEELFGSMESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
              G I  A E++  +      + ++ SYN++ING CK  + +E+  ++  M        
Sbjct: 230 FKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQD 289

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           + TY+TL  GL     ++ A ++++EM  + V+ D   YNT ++G  + G I E +EL++
Sbjct: 290 LYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWK 349

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C   + +YN LI GL ++ +++ A+ ++  LP +   AD +TY +++HGLC +G
Sbjct: 350 VMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNG 408

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            ++KA  +  + E      +   + ++I+G  R  +  +V  +L +M +    P+  + +
Sbjct: 409 YLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCN 468

Query: 371 MVVD 374
            V++
Sbjct: 469 AVIN 472



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 186/370 (50%), Gaps = 34/370 (9%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G    PN  +YN +I+GLCK G  D++  ++ +MK      D+ TY++LIHGLC + + +
Sbjct: 248 GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLD 307

Query: 69  EAKRLFFEMMDQGVQP----------------------------------SVVTFNVIMD 94
            A R++ EM + GV P                                  +VV++N+++ 
Sbjct: 308 GATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIR 367

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            L +N K+DEA  + +L+ ++D   ++ TY  L+ G C  G +N+A  +    E+     
Sbjct: 368 GLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL 427

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D  +Y+ +ING C+   ++E   +  +M   G KP     N +  G     ++E AL+ F
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
             M          TYNT I+GL K     EA  L + +     + ++  Y+ L++GLC+ 
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            +L++AL L+     +    DV  +NI+IHGLC+ G+++ A  L+ +M++    PN++  
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607

Query: 335 VTLIHGFVRI 344
            TL+ GF ++
Sbjct: 608 NTLMEGFYKV 617



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 145/268 (54%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V+YN +I GL +   VD+A +++  +  ++   D +TY  L+HGLC     N+A  +  E
Sbjct: 360 VSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEE 419

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
             +         ++ +++ LC+ G++DE + +LD M +   +PN    + +++GF    K
Sbjct: 420 AENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASK 479

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +  A   FG+M S GC    V+YN LING  K +   EA +L +EM+ KG KP ++TY+ 
Sbjct: 480 LEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSL 539

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  GL +  +++ AL L+ +        D   +N  I GLC +G + +A++L+  +   K
Sbjct: 540 LMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRK 599

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELF 284
           C  ++  +N L++G  K    E A +++
Sbjct: 600 CVPNLVTHNTLMEGFYKVRDFERASKIW 627



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 151/302 (50%), Gaps = 4/302 (1%)

Query: 75  FEMMDQ--GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           F+ M +  G QP + ++N +++ L ++ K DEA           + PN  TY+ L+   C
Sbjct: 101 FQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISC 160

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              + ++A+EL   M   G   D  SY  LIN   KN  + +AL L+ EM  +G+ P V 
Sbjct: 161 RKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVA 220

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQR-DDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            YN L  G F+   + +A +++E + +   V  +  +YN  I+GLCK G   E+ E++  
Sbjct: 221 CYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHR 280

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +   D+  Y+ LI GLC SG L+ A  +++ +    +  DVV YN M++G    G+
Sbjct: 281 MKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 340

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++  +L+  ME+      V+ +  LI G     K  + I +   + EK    D+    +
Sbjct: 341 IEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGV 399

Query: 372 VV 373
           +V
Sbjct: 400 LV 401



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 73/215 (33%), Positives = 122/215 (56%), Gaps = 6/215 (2%)

Query: 3   NGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC 62
           NG G++      +T  Y+++I+GLC+EG +D+   +  QM      P+    N++I+G  
Sbjct: 422 NGRGDL------DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFV 475

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
            A+   +A R F  M+ +G  P+VVT+N +++ L K  +  EA  L+  M+ +  +PN  
Sbjct: 476 RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMI 535

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TYS LM+G C   K++ A  L+      G K D   +NI+I+G C + +VE+AL LY EM
Sbjct: 536 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 595

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
             +   P +VT+NTL  G +++   E A K+++ +
Sbjct: 596 KQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 630



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 147/317 (46%), Gaps = 37/317 (11%)

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           G   +   F+ I+  L     +   SR+++L+  +  +       T++  +      ++A
Sbjct: 38  GYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQA 97

Query: 141 EELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
            ++F  M E  GC+    SYN L+N   ++ + +EA S +    + G+ P + TYN L  
Sbjct: 98  LDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIK 157

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
                 Q + A +L   M     + D  +Y T I+ L KNGY+ +A++LF  +       
Sbjct: 158 ISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTP 217

Query: 260 DIQAYNCLID------------------------------------GLCKSGRLEIALEL 283
           D+  YN LID                                    GLCK G+ + + E+
Sbjct: 218 DVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEI 277

Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           +  + +     D+ TY+ +IHGLC  G +D A  ++ +M EN V+P+V+++ T+++G++R
Sbjct: 278 WHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLR 337

Query: 344 INKPSKVIELLHKMKEK 360
             +  + +EL   M+++
Sbjct: 338 AGRIEECLELWKVMEKE 354



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 62/110 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN +TY+ +++GLC+   +D A  L+ Q   +   PDV  +N +IHGLC +    +A +
Sbjct: 531 KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQ 590

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
           L+ EM  +   P++VT N +M+   K    + AS++ D ++Q     N +
Sbjct: 591 LYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSNCY 640



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 44/209 (21%), Positives = 79/209 (37%), Gaps = 37/209 (17%)

Query: 170 KEVEEALSLYREMVS-KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
           K    ALS++  +    G   T   ++ +   LF+   V H  ++ E ++          
Sbjct: 21  KNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDV 80

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLG-ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
             T I    KN    +A+++F+ +  I  C+  I++YN L++ L +S             
Sbjct: 81  ALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESN------------ 128

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
                                  + D+A   FL  E   ++PN+  +  LI    R  + 
Sbjct: 129 -----------------------KWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQF 165

Query: 348 SKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            K  ELL+ M E+   PD      +++ L
Sbjct: 166 DKAKELLNWMWEQGFSPDVFSYGTLINSL 194


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 181/350 (51%), Gaps = 3/350 (0%)

Query: 16  TVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFF 75
            VTY+ + DG C+ G +D+A+ +   + G  + P    YN L+H LC      +A  L  
Sbjct: 120 AVTYSALADGYCRVGRLDEARRV---VDGMPVLPSAYAYNPLMHALCVRGQVRDALVLLD 176

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
            M+ +G  P VVT+N++++  CK     +A  L+DLM      P   TY+ +MDG C  G
Sbjct: 177 NMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREG 236

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
            ++ A EL  S+ S GC  + V+YN ++ G       E+   L  EM S+   P+  T +
Sbjct: 237 DVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLS 296

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
            +   L +    + A++L E+M + D  A+  TYN  + GLC+ G++  A+ L   +   
Sbjct: 297 VVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTD 356

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
            C+ +I  YN L+ GLC + R E A +L   + +   + D++T+N +I  LC  G   +A
Sbjct: 357 GCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQA 416

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            ++F  M E    PN + + ++I G  +  K  + +ELL++M  K   P+
Sbjct: 417 VEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPE 466



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 182/354 (51%), Gaps = 1/354 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  VTYN I+DG+C+EG VD A+ L   +      P+ V YN+++ GL  A  W + +
Sbjct: 218 CTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVE 277

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM  +   PS  T +V++  LC+ G    A RLL+ M + D   N  TY+ ++ G 
Sbjct: 278 ELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGL 337

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G ++ A  L  +M++ GCK +  +YNIL+ G C  +  E+A  L  +M      P +
Sbjct: 338 CEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDI 397

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +T+NT+   L +      A+++F++M       ++ TY++ I+GL K G + +++EL   
Sbjct: 398 LTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNE 457

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +G      +I  Y+ L + L +  +L  A+++   L    +    V YN ++ GLC +G+
Sbjct: 458 MGSKGFNPEIN-YHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGK 516

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            D+A D+  +M  +   P+   +  LI G        +  ELL  +  + V+ D
Sbjct: 517 TDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDVIVD 570



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 189/400 (47%), Gaps = 36/400 (9%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G+   P+   YN ++  LC  G V  A  L   M      PDVVTYN L+   C    + 
Sbjct: 145 GMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYR 204

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  L   M  +G  P+ VT+NVIMD +C+ G +D A  LL+ +      PN   Y+T++
Sbjct: 205 QAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVL 264

Query: 129 DGFCLTGKINRAEELFGSMESMGC-------------------------------KHDD- 156
            G    G+    EEL   M S  C                               KHD  
Sbjct: 265 KGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCT 324

Query: 157 ---VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
              V+YN +++G C+   V+ AL L   M + G KP + TYN L  GL    + E A  L
Sbjct: 325 ANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDL 384

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
             +M + D   D  T+NT I  LC+ G  ++AVE+F+ +    C  +   Y+ +I+GL K
Sbjct: 385 MAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAK 444

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           +G++E +LEL   +  +    ++  Y+++   L  + ++ +A  +   +++  ++P  ++
Sbjct: 445 TGKMEQSLELLNEMGSKGFNPEI-NYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVL 503

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           + T++ G  R  K  + I++L  M     MPD S  S+++
Sbjct: 504 YNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILI 543



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 178/366 (48%), Gaps = 6/366 (1%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +C P+    N ++  LC+ G    A A  ++  G       VTY++L  G C     +EA
Sbjct: 83  LCPPDVALANRLVRDLCRRGRPADA-ARVVEACGSAAT--AVTYSALADGYCRVGRLDEA 139

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           +R+   M    V PS   +N +M  LC  G++ +A  LLD M+ R   P+  TY+ L++ 
Sbjct: 140 RRVVDGM---PVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEA 196

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C      +A EL   M   GC   +V+YN++++G C+  +V+ A  L   + S G  P 
Sbjct: 197 ACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPN 256

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            V YNT+  GL    + E   +L  EM  ++     +T +  I  LC+ G    A+ L  
Sbjct: 257 TVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLE 316

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C  +I  YN ++ GLC+ G ++ AL L  ++       ++ TYNI++ GLCN  
Sbjct: 317 KMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAE 376

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           + + A DL   M +    P+++ F T+I    +     + +E+  +M EK   P++   S
Sbjct: 377 RWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYS 436

Query: 371 MVVDLL 376
            V++ L
Sbjct: 437 SVIEGL 442


>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
 gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
          Length = 540

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 187/361 (51%), Gaps = 4/361 (1%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V Y  II+ L K    D+A A F +M     +PD+ T+  +I GLC A   N A  +F E
Sbjct: 108 VAYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQE 167

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M  +G +P ++ +  ++D L K   MDEA +LL  +V R ++P   TY++ + G C  G+
Sbjct: 168 MNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGR 227

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +  A +L   M  M C  + +  + +  GY    ++EEAL+L  EMV KG+   V  Y  
Sbjct: 228 VEEAGKLVREMGKM-CAAEVL--HCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTN 284

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  GLF + + + A ++FE M R     DT TY   +   CK G +  A ++   +    
Sbjct: 285 LIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAG 344

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            E +   YN L+DG     R   A+ ++ ++ R+++   +VTYNI++ GLC  GQ   A 
Sbjct: 345 LEANCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADAR 404

Query: 317 DLFLDM-EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
            +  +M E + + P ++ + TLIHG  +  +  + I++  +M +  V+PD    + ++  
Sbjct: 405 LVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQA 464

Query: 376 L 376
           L
Sbjct: 465 L 465



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 194/401 (48%), Gaps = 74/401 (18%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  T+  +I GLCK G +++A  +F +M  +   PD++ Y SL+ GL  A+  +EA+
Sbjct: 138 CDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEAR 197

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL---------------------- 109
           +L  E++ +G++P+ VT+   +  LCKNG+++EA +L+                      
Sbjct: 198 KLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKMCAAEVLHCIFGGYVLE 257

Query: 110 ----------DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
                     D MV++ V  +   Y+ L+ G     + + A+E+F +M   GC  D  +Y
Sbjct: 258 GKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTY 317

Query: 160 NILINGYCKNKEVE-----------------------------------EALSLYREMVS 184
            ++++ +CK  +++                                   EA+++Y  M+ 
Sbjct: 318 GMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYSTMLR 377

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCKNGYIV 243
           K +KP++VTYN L LGL ++ Q   A  +  EM +RD +     +Y T I GL K G   
Sbjct: 378 KMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRAD 437

Query: 244 EAVELFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
           EA+++F  +   G++    D  +   LI  L  + R++ A +L R +PR  +  D + YN
Sbjct: 438 EAIDVFTEMVDNGVVP---DCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYN 494

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            ++  LC   ++  A D+ ++M +N+  P+   F  +  GF
Sbjct: 495 ALVKVLCGGAKVGPAWDVLVEMMDNSCVPDGSTFRAMKLGF 535



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 178/388 (45%), Gaps = 71/388 (18%)

Query: 50  DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA-SRL 108
           DV +YN +I GLC A  ++ A  L  EM   G++ S VT  +I+  LC+  ++D+A S  
Sbjct: 3   DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYF 62

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG----------------- 151
             +  + D+  +  +Y+TL+ G   +G+I+ A ELF  M S G                 
Sbjct: 63  HSVSPRSDL--DVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQCVVAYTAIINALFKA 120

Query: 152 -----------------CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
                            C  D  ++ ++I G CK  ++  A  +++EM  KG KP ++ Y
Sbjct: 121 HRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVY 180

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG- 253
            +L  GL +   ++ A KL +E+    +     TY +FI GLCKNG + EA +L R +G 
Sbjct: 181 TSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGK 240

Query: 254 -----ILKC--------------------------ELDIQAYNCLIDGLCKSGRLEIALE 282
                +L C                           LD++ Y  LI GL    R + A E
Sbjct: 241 MCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQE 300

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           +F ++ R+  V D  TY +++   C  G+M  A  +   M+   +  N  ++ +L+ GF+
Sbjct: 301 MFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFL 360

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVS 370
            +N+  + I +   M  K V P  SIV+
Sbjct: 361 GVNRAREAINVYSTMLRKMVKP--SIVT 386



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 151/330 (45%), Gaps = 33/330 (10%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKG---------------------------- 44
           KP  VTY + I GLCK G V++A  L  +M                              
Sbjct: 209 KPTEVTYTSFISGLCKNGRVEEAGKLVREMGKMCAAEVLHCIFGGYVLEGKIEEALTLKD 268

Query: 45  ----ENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
               + +  DV  Y +LIHGL +    +EA+ +F  M+ QG  P   T+ +I+   CK G
Sbjct: 269 EMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQG 328

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           KM  A +++++M    +  N   Y++LMDGF    +   A  ++ +M     K   V+YN
Sbjct: 329 KMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYN 388

Query: 161 ILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           IL+ G CK  +  +A  + REM  + GI PT+V+Y TL  GL +  + + A+ +F EM  
Sbjct: 389 ILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVD 448

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
           + V  D  +  + I  L     + EA +L R +  +    D  AYN L+  LC   ++  
Sbjct: 449 NGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGP 508

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           A ++   +     V D  T+  M  G   D
Sbjct: 509 AWDVLVEMMDNSCVPDGSTFRAMKLGFKAD 538



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 39/151 (25%)

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSL------------------------------- 287
           LD+ +YN +I GLC +GR   A EL + +                               
Sbjct: 2   LDVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSY 61

Query: 288 -----PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
                PR  L  DVV+Y  +I GL + G++D A +LF +M  +  +  V+ +  +I+   
Sbjct: 62  FHSVSPRSDL--DVVSYTTLIMGLADSGRIDVACELFEEMSSSG-SQCVVAYTAIINALF 118

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           + ++P + I    +M  +K  PD    ++V+
Sbjct: 119 KAHRPDQAIACFERMVARKCDPDLRTFTVVI 149



 Score = 37.7 bits (86), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 17/81 (20%), Positives = 39/81 (48%)

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           DV +YNI+I GLC  G+  +A++L  +ME   +  + +    ++       +  + +   
Sbjct: 3   DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYF 62

Query: 355 HKMKEKKVMPDASIVSMVVDL 375
           H +  +  +   S  ++++ L
Sbjct: 63  HSVSPRSDLDVVSYTTLIMGL 83


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 197/369 (53%), Gaps = 2/369 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E GV  KP  VTY++++   C  G +D+A  L+ +M G+   P+VVTY +L+ G  +   
Sbjct: 414 ETGV--KPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAA 471

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           +++A  L  EM   GV  +  T+N +++ LC  G++ E   +L         P A TY++
Sbjct: 472 FDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNS 531

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           +++GF   G +  A  ++  M + G   + V+Y   I+GYCK    + AL +  ++  KG
Sbjct: 532 IINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKG 591

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           ++P +  YN+L  G  +   + HAL++   M +D +  + S YN+FI G      + EA+
Sbjct: 592 LRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEAL 651

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
             +  +     +LD   Y  LIDG  K G +  AL+L+  +  +  + D +T+  + HGL
Sbjct: 652 RFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGL 711

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C +G +D A  L  +M    + PNV+++  LI+G++R  K  +   L  +M E+K+MPD 
Sbjct: 712 CRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDD 771

Query: 367 SIVSMVVDL 375
           +   ++V +
Sbjct: 772 TTYDILVGM 780



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 175/352 (49%), Gaps = 1/352 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T  +N +I GL  +     A +LF +M    I PD  TYN LIH LC      EA  L
Sbjct: 350 PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNL 408

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +M + GV+P +VT++ ++   C NG MDEA +L   M  +   PN  TY+TLM G   
Sbjct: 409 WEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
               ++A  L   M+  G   +D +YN LING C    V E   + +   ++G  PT +T
Sbjct: 469 KAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMT 528

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN++  G  +   +  A  ++++M    +  +  TY +FIDG CK      A+++   + 
Sbjct: 529 YNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVR 588

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 DI AYN LI G C+ G +  AL++   + +  L+ ++  YN  I G  N   M+
Sbjct: 589 CKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMME 648

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A   +  M +  +  +   + TLI GF +    +  ++L  +M  K  +PD
Sbjct: 649 EALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPD 700



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 181/361 (50%), Gaps = 1/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTY  +I G  +EG  +KA  L  QM+   + P    +N +I GL +   W +A  L
Sbjct: 315 PTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSL 374

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM D G+ P   T+N+++  LC+  K+ EA  L + M +  V+P   TY +L+  +C+
Sbjct: 375 FKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCV 433

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A +L+  M   G   + V+Y  L+ G+      ++A +L  EM   G+     T
Sbjct: 434 NGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYT 493

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL  + +V    ++ +  + +       TYN+ I+G  K G +  A  +++ + 
Sbjct: 494 YNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMC 553

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +I  Y   IDG CK+   ++AL++   +  + L  D+  YN +I+G C +G M 
Sbjct: 554 AKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMS 613

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  + + M ++ + PN+ ++ + I G+  +    + +    KM ++ +  D +  + ++
Sbjct: 614 HALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLI 673

Query: 374 D 374
           D
Sbjct: 674 D 674



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 178/356 (50%), Gaps = 1/356 (0%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           ++ ++    KEG  D A  LF +M    I PD    +  I  LC   D N A  +  +M 
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQ 239

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           D G  P   TFN ++D L K G+M+EA  + D ++    + +    +TLM G+CL  ++ 
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
           +A ++F      G    DV+Y +LI G  +    E+A  L R+M   G+ P+   +N + 
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVI 359

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            GL      + A+ LF+EM  D    D  TYN  I  LC+   I EA+ L+  +     +
Sbjct: 360 KGLLNDKLWKDAVSLFKEMA-DSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVK 418

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
             I  Y+ L+   C +G ++ A++L+  +P +    +VVTY  ++ G  N    DKA+ L
Sbjct: 419 PYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYAL 478

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +M++N V+ N   + TLI+G   + +  +V E+L + + +  +P A   + +++
Sbjct: 479 LAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIIN 534



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 177/359 (49%), Gaps = 7/359 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V   T++ G C +  V KA  +F +   + + P  VTY  LI G        +A  
Sbjct: 279 KMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYE 338

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M D G+ PS   FN+++  L  +    +A  L   M    + P+AFTY+ L+   C
Sbjct: 339 LCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLC 397

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              KI  A  L+  M   G K   V+Y+ L+  YC N  ++EA+ LY EM  KG  P VV
Sbjct: 398 QRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVV 457

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL---F 249
           TY TL  G       + A  L  EM+++ V+ +  TYNT I+GLC  G + E  E+   F
Sbjct: 458 TYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRF 517

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
            T G +   +    YN +I+G  K+G +  A  +++ +  + +  ++VTY   I G C  
Sbjct: 518 ETEGFVPTAM---TYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKT 574

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
              D A  +  D+    + P++  + +LI+GF +    S  +++L  M +  ++P+ S+
Sbjct: 575 SCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISV 633



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 150/356 (42%), Gaps = 34/356 (9%)

Query: 41  QMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
            M+   + PD  +   L+     +    +A  L  EM  +G       F+V+M    K G
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEG 191

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
             D+A RL D M   ++ P+    S  +   C     NRA  +   M+  G    D ++N
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            +++   K   +EEAL +  E+++ G K +VV   TL  G     +V  AL +FEE  RD
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTL-----------------GILKCEL---- 259
            +     TY   I G  + G   +A EL R +                 G+L  +L    
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 260 -------------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
                        D   YN LI  LC+  ++  AL L+  +    +   +VTY+ ++   
Sbjct: 372 VSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCY 431

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           C +G MD+A  L+ +M      PNV+ + TL+ G +      K   LL +MK+  V
Sbjct: 432 CVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGV 487



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 115/265 (43%), Gaps = 1/265 (0%)

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           M  R V P+A + + L+     +     A  L   M   G   D   +++++    K   
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
            ++A+ L+ EM +  I+P     +     L ++     AL +  +MQ         T+N+
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            +D L K G + EA+ +   L     ++ +     L+ G C    +  AL++F    R  
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           LV   VTY ++I G   +G  +KA++L   M ++ + P+   F  +I G +        +
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 352 ELLHKMKEKKVMPDASIVSMVVDLL 376
            L  +M +  + PDA   ++++  L
Sbjct: 373 SLFKEMADSGI-PDAFTYNILIHWL 396


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 195/366 (53%), Gaps = 12/366 (3%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GVV  PN  TY+ +IDG CK G + +A  L+ ++    + P+VV + +L+ G C A +  
Sbjct: 298 GVV--PNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELV 355

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A+ LF  M+  GV P++  +N ++   CK+G M EA  LL  M   ++ P+ FTY+ L+
Sbjct: 356 AARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILI 415

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +G C   ++  A  LF  M++       V+YN LI+G+CK   +E+AL L  EM S G++
Sbjct: 416 NGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVE 475

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P ++T++TL  G  ++  ++ A+ L+ EM    +  D  TY T ID   K   + EA+ L
Sbjct: 476 PNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRL 535

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF---------RSLPRRVLVADVVTY 299
           +  +       +   + CL+DG  K GRL  A++ +         +S+ +R      V +
Sbjct: 536 YSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRS-CWKYVGF 594

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
             +I GLC +G + +A   F DM+   V P++  +V+++   +R  + +  + L   M +
Sbjct: 595 TCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIK 654

Query: 360 KKVMPD 365
             ++P+
Sbjct: 655 TGILPN 660



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 172/340 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   Y+ +     K+GF  K + L  +M    + P+V  Y   I  LC  N   EA+++
Sbjct: 231 PDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKM 290

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   GV P++ T++ ++D  CK G + +A  L   ++  ++ PN   + TL+DGFC 
Sbjct: 291 FELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCK 350

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++  A  LF  M   G   +   YN LI+G CK+  + EA+ L  EM S  + P V T
Sbjct: 351 ARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFT 410

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL    ++  A +LF+ M+ + +   + TYN+ I G CK   I +A++L   + 
Sbjct: 411 YTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMT 470

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E +I  ++ LIDG CK   ++ A+ L+  +  + +V DVVTY  +I     +  M 
Sbjct: 471 SSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMK 530

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
           +A  L+ DM E  + PN   F  L+ GF +  + S  I+ 
Sbjct: 531 EALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDF 570



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 178/363 (49%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P++     I++GL +    D     +  M    + PDV  Y+ L          ++ +
Sbjct: 194 CSPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKE 253

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  EM   GV+P+V  + + + +LC+  KM+EA ++ +LM    V PN +TYS ++DG+
Sbjct: 254 KLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGY 313

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C TG + +A  L+  +       + V +  L++G+CK +E+  A SL+  MV  G+ P +
Sbjct: 314 CKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNL 373

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             YN L  G  +   +  A+ L  EM+  +++ D  TY   I+GLC    + EA  LF+ 
Sbjct: 374 YVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQR 433

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +       YN LI G CK   +E AL+L   +    +  +++T++ +I G C    
Sbjct: 434 MKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRN 493

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +  A  L+ +M    + P+V+ + TLI    +     + + L   M E  + P+    + 
Sbjct: 494 IKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC 553

Query: 372 VVD 374
           +VD
Sbjct: 554 LVD 556



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 155/328 (47%), Gaps = 22/328 (6%)

Query: 50  DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
           D+ +++++IH L  A+ +  A+ L   ++++  + S  T              + + RL 
Sbjct: 108 DLQSFSAVIHVLTGAHKYTLARCLIKSLIERLRRYSEPT--------------NISHRLF 153

Query: 110 DLMVQRDVRPNAFT---YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
           + +   D++   F+   +S L+  F   G    A  L+ S E M C  D  +   ++NG 
Sbjct: 154 NAL--EDIQSPKFSIGVFSLLIMEFLEMGLFEDA--LWVSRE-MRCSPDSKACLAILNGL 208

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
            + +  +     Y+ M+S+G+ P V  Y+ LF   F+        KL +EM    V  + 
Sbjct: 209 VRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNV 268

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
             Y  +I  LC+   + EA ++F  + I     ++  Y+ +IDG CK+G L  A  L++ 
Sbjct: 269 YIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKE 328

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +    L+ +VV +  ++ G C   ++  A  LF+ M +  V PN+ ++  LIHG  +   
Sbjct: 329 ILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGN 388

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVD 374
             + + LL +M+   + PD    +++++
Sbjct: 389 MLEAMGLLSEMESLNLSPDVFTYTILIN 416



 Score = 44.7 bits (104), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 21/89 (23%), Positives = 44/89 (49%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V +  +I+GLC+ G++ +A   F  MK   + PD+ +Y S++          +   L  +
Sbjct: 592 VGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCD 651

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEA 105
           M+  G+ P+++   ++     +NG +  A
Sbjct: 652 MIKTGILPNLMVNQLLAMFYQENGYLRSA 680


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  203 bits (517), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 188/350 (53%), Gaps = 3/350 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+   YN +IDG+CKEG ++ A  L  +M    ++P+VV+Y+ +I+ LC + +   A  
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFA 300

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF +M  +G   ++ TF  ++      GK+ EA  L  LM+Q    PN   Y+TL+ G C
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A ++   M+  GC  +  +Y+ILI+G+ K+ ++  A   +  M+S G +P VV
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  +   L +    + A  L E+M  +    +T T+NTFI GLC NG +  A++L   +
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  +I  YN L+D L +  + E A  LF+ +  R L  ++VTYN +++G    G M
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMM 540

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK---PSKVIELLHKMKE 359
            +A  LF        AP+ I + T+IH + +  K    ++++E +  MKE
Sbjct: 541 GEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKE 590



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/371 (32%), Positives = 185/371 (49%), Gaps = 7/371 (1%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE G  CKP    YN ++D L  E        L+  MK + + P+V TYN L+  LC  +
Sbjct: 136 GEFG--CKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKND 193

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             + A +LF EM ++G  P  VT+  ++  LCK GK+D+A  L         +P+   Y+
Sbjct: 194 RVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAG-----RFKPSVPVYN 248

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+DG C  G+I  A +L G M   G   + VSY+ +IN  C +  VE A +L+ +M  +
Sbjct: 249 ALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLR 308

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G    + T+  L  G F   ++  AL L++ M +D    +   YNT I GLC NG + EA
Sbjct: 309 GCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEA 368

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           +++   +    C  ++  Y+ LIDG  KSG L  A E +  +       +VVTY  M+  
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC +   D+A+ L   M      PN I F T I G     +    ++LL +M+    +P+
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPN 488

Query: 366 ASIVSMVVDLL 376
            +  + ++D L
Sbjct: 489 ITTYNELLDAL 499



 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 176/365 (48%), Gaps = 38/365 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENIN----------------------- 48
           PN V+Y+ II+ LC  G V+ A ALF QM  +G + N                       
Sbjct: 277 PNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDL 336

Query: 49  ----------PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                     P+VV YN+LIHGLC      EA ++  +M   G  P+V T+++++D   K
Sbjct: 337 WKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAK 396

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           +G +  AS   + M+    RPN  TY+ ++D  C     ++A  L   M   GC  + ++
Sbjct: 397 SGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTIT 456

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +N  I G C N  VE A+ L   M   G  P + TYN L   LF +++ E A  LF+E++
Sbjct: 457 FNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIE 516

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
             ++  +  TYNT + G  + G + EA++LF    +     D   YN +I   CK G+++
Sbjct: 517 ARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVK 576

Query: 279 IALELF-RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN-AVAPNVIIFVT 336
           IA +L  R    +    D++TY  +I G CN   +++A   FLD   N  + PN   +  
Sbjct: 577 IAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAM-AFLDKAINQGICPNFATWNA 635

Query: 337 LIHGF 341
           L+  F
Sbjct: 636 LVRCF 640



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 2/309 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN V YNT+I GLC  G +++A  +  QM+     P+V TY+ LI G   + D   A 
Sbjct: 345 CEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGAS 404

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             +  M+  G +P+VVT+  ++D LCKN   D+A+ L++ M      PN  T++T + G 
Sbjct: 405 ETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGL 464

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++  A +L   M+  GC  +  +YN L++   +  + EEA  L++E+ ++ ++P +
Sbjct: 465 CGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNL 524

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNT+  G      +  AL+LF +      A D+ TYNT I   CK G +  A +L   
Sbjct: 525 VTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVER 584

Query: 252 LGILK-CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND- 309
           +  +K    DI  Y  LI G C    +E A+        + +  +  T+N ++    +  
Sbjct: 585 VSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSL 644

Query: 310 GQMDKAHDL 318
           G M   H L
Sbjct: 645 GHMGPIHIL 653



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 185/359 (51%), Gaps = 5/359 (1%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY  +I+ L +E  +D  + +  QMK + IN     +  +I+G        +A ++F+ +
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
            + G +P+V  +N ++D L    K    + L   M +  + PN FTY+ L+   C   ++
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A +LF  M + GC  D V+Y  +++  CK  ++++A    RE+  +  KP+V  YN L
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA----RELAGR-FKPSVPVYNAL 250

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G+ +  ++E A+KL  EM  + V  +  +Y+  I+ LC +G +  A  LF  + +  C
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           + +I  +  LI G    G+L  AL+L++ + +     +VV YN +IHGLC++G +++A  
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +   M+ +   PNV  +  LI GF +        E  ++M      P+    + +VD+L
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVL 429



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 146/327 (44%), Gaps = 40/327 (12%)

Query: 83  QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEE 142
           Q +  T+ V+++ L +  +MD    +L  M    +      +  +++G+   G   +A +
Sbjct: 71  QHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALK 130

Query: 143 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 202
           +F  +   GCK     YN L++      + +    LY  M   G+ P V TYN L   L 
Sbjct: 131 MFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALC 190

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ 262
           +  +V+ A KLF EM       D  TY T +  LCK G I +A EL    G  K  + + 
Sbjct: 191 KNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL---AGRFKPSVPV- 246

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
            YN LIDG+CK GR+E+A++L   +    +  +VV+Y+ +I+ LC  G ++ A  LF  M
Sbjct: 247 -YNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQM 305

Query: 323 E-----------------------------------ENAVAPNVIIFVTLIHGFVRINKP 347
                                               ++   PNV+ + TLIHG       
Sbjct: 306 FLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSL 365

Query: 348 SKVIELLHKMKEKKVMPDASIVSMVVD 374
            + +++  +M+    +P+ +  S+++D
Sbjct: 366 EEALQVCDQMQRSGCLPNVTTYSILID 392



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 91/191 (47%), Gaps = 5/191 (2%)

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
           S   + T  TY  +   L    +++    + ++M+ D +      +   I+G  + G   
Sbjct: 67  SNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAE 126

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           +A+++F  +G   C+  ++ YN L+D L    + ++   L+ ++ +  L+ +V TYNI++
Sbjct: 127 QALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILL 186

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
             LC + ++D AH LF++M      P+ + + T++    +  K     EL  + K     
Sbjct: 187 KALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK----- 241

Query: 364 PDASIVSMVVD 374
           P   + + ++D
Sbjct: 242 PSVPVYNALID 252


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/351 (34%), Positives = 184/351 (52%), Gaps = 11/351 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TYN I+D L ++ F+  A  ++ +M   N  P+V T++ LI GLC + +  +A 
Sbjct: 157 CTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDAL 216

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM  +G+ P   T+ V++  LC++ ++D+A RL D M    V P+  T + L++GF
Sbjct: 217 HLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGF 276

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C+  +++ A  L    E  G   D   Y+ LI G  + K  E+   LYR+M+   +KP V
Sbjct: 277 CMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDV 336

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y  +  GL E  +V  AL+L  EM    V  DT  YN  I G C  G + EA  L   
Sbjct: 337 YLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLE 396

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  +++ Y+ LI G+C++G    A E+F  + +       VT+N +I GLC  GQ
Sbjct: 397 ISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQ 456

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE--LLHKMKEK 360
           ++KAH LF  ME   +  N  +F+ L  G      PS V++   L KM E+
Sbjct: 457 LEKAHLLFYKME---IGRNPSLFLRLSQG------PSHVLDSASLQKMVEQ 498



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 188/376 (50%), Gaps = 22/376 (5%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           + N   E GVV  P+TV YN +I G C  G + +A++L L++   +  P+V TY+ LI G
Sbjct: 358 LLNEMTESGVV--PDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISG 415

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL---------DL 111
           +C      +A+ +F EM   G  PS VTFN ++D LCK G++++A  L           L
Sbjct: 416 MCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSL 475

Query: 112 MVQRDVRP----NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
            ++    P    ++ +   +++  C +G I++A  +   +   G      +YNIL+NG+C
Sbjct: 476 FLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFC 535

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           K      A  L+REM  KG+ P  VTY TL  GL    + E A K+F++M+++    D +
Sbjct: 536 KLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAA 595

Query: 228 TYNTFIDGLCKNGYIVEAVELF-RTLGILKCELD--IQAYNCLIDGLCKSGRLEIALELF 284
            Y T +  +C+   +  A  L+ + L  ++ + D  I+A    I+G  +   +E A+   
Sbjct: 596 VYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAIKA----IEGYFEKQEVEKAVRGL 651

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
             +  ++   D+  Y I + GLC   ++ +A  +FL +EE  V       V LI+  ++ 
Sbjct: 652 LEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLILEEYKVVITPPCCVKLIYFLLKE 711

Query: 345 NKPSKVIELLHKMKEK 360
               + I++     EK
Sbjct: 712 GDLDRAIDVFLYTIEK 727



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 151/307 (49%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A   F  M D    P V T+N+I+D L +   +  A  +   M++ +  PN  T+S L
Sbjct: 143 DKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSIL 202

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DG C +G +  A  LF  M   G   D  +Y ++I+G C++K V++A  L+ +M   G+
Sbjct: 203 IDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGV 262

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P  VT N L  G   + +V+ A  L    ++D    D   Y+  I GL +     +   
Sbjct: 263 GPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQL 322

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L+R +     + D+  Y  ++ GL ++G++  ALEL   +    +V D V YN++I G C
Sbjct: 323 LYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFC 382

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           + G + +A  L L++  +   PNV  +  LI G  R        E+ ++M++    P A 
Sbjct: 383 DMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAV 442

Query: 368 IVSMVVD 374
             + ++D
Sbjct: 443 TFNSLID 449



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 140/286 (48%)

Query: 88  TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
            F V++    K G  D+A      M   D  P+ +TY+ ++D       +  A  ++  M
Sbjct: 128 AFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRM 187

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
             + C  +  +++ILI+G CK+  V++AL L+ EM  +GI P   TY  +  GL    +V
Sbjct: 188 MKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRV 247

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
           + A +LF++M+   V  D  T N  ++G C    + EA  L R        LD++ Y+CL
Sbjct: 248 DDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCL 307

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           I GL ++ R E    L+R +    +  DV  Y IM+ GL   G++  A +L  +M E+ V
Sbjct: 308 IRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGV 367

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            P+ + +  LI GF  +   S+   L  ++      P+    S+++
Sbjct: 368 VPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILI 413



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 99/187 (52%), Gaps = 4/187 (2%)

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ----VEHALKLFEEMQRDDVAADTST 228
           +  L LY + +       +  +N  F  L +++      + A++ F  M+  D   D  T
Sbjct: 104 QNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYT 163

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           YN  +D L +  +++ A+ ++  +  L C  ++  ++ LIDGLCKSG ++ AL LF  + 
Sbjct: 164 YNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMT 223

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
           +R ++ D  TY ++I GLC   ++D A+ LF  M+++ V P+ +    L++GF  +++  
Sbjct: 224 QRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVD 283

Query: 349 KVIELLH 355
           +   LL 
Sbjct: 284 EAFSLLR 290


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 202/381 (53%), Gaps = 23/381 (6%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + VTYNT+I G C++G VD+   L  +M    +  D +T N L+ G C       A+ + 
Sbjct: 161 DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVM 220

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
           + ++D GV   V+  N ++D  C+   M +A+ L++   + DV+ +  TY+TL+  FC T
Sbjct: 221 YNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKT 280

Query: 135 GKINRAEELFGSMESMGCKHDD---------------------VSYNILINGYCKNKEVE 173
           G + RAE LF   E +G   D+                     V+Y  LI  YCK   VE
Sbjct: 281 GDLTRAESLFN--EILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVE 338

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           E+ SLY++M+  GI P VVT +++  G     ++  A  LF EM    +  +  +Y T I
Sbjct: 339 ESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATII 398

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
           + L K+G ++EA  L   + +     DI     ++DGL K G+ + A E+F ++ +  L 
Sbjct: 399 NSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLA 458

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            + VTY+ ++ G C  G+M+ A  +   ME+  V PNVI F ++I+G+ +    SK +++
Sbjct: 459 PNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDV 518

Query: 354 LHKMKEKKVMPDASIVSMVVD 374
           L +M ++ VMP+  + ++++D
Sbjct: 519 LREMVQRNVMPNTIVYAILID 539



 Score =  165 bits (417), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 197/396 (49%), Gaps = 36/396 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VTY T+I   CK   V+++ +L+ +M    I PDVVT +S+++G C      EA  
Sbjct: 318 QPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAV 377

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM + G+ P+ V++  I++ L K+G++ EA  L   MV R +  +  T +T+MDG  
Sbjct: 378 LFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLF 437

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK   AEE+F ++  +    + V+Y+ L++GYCK  ++E A  + ++M  + + P V+
Sbjct: 438 KVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVI 497

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG------------LCKN- 239
           T++++  G  +   +  A+ +  EM + +V  +T  Y   IDG             CK  
Sbjct: 498 TFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEM 557

Query: 240 ----------------------GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
                                 G + EA  L   +     + DI  Y  LIDG  K G  
Sbjct: 558 KSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQ 617

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             AL + + +  + +  DVV YN +I GL   G+ D  + +   M E  +AP+ I + T+
Sbjct: 618 LAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTI 676

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           I+ +    K    +++L++MK   +MP+A   ++++
Sbjct: 677 INTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILI 712



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 201/432 (46%), Gaps = 74/432 (17%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VT  T++DGL K G   +A+ +F  +   N+ P+ VTY++L+ G C       A+ +  +
Sbjct: 427 VTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQK 486

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M  + V P+V+TF+ I++   K G + +A  +L  MVQR+V PN   Y+ L+DG+   G+
Sbjct: 487 MEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGE 546

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
            + A++    M+S   +  +V ++IL+N   +   ++EA SL  +M SKGI P +V Y +
Sbjct: 547 QDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYAS 606

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDV---------------------------------- 222
           L  G F+      AL + +EM+  ++                                  
Sbjct: 607 LIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGL 666

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG------- 275
           A D  TYNT I+  C  G   +A+++   +       +   YN LI GLCK+G       
Sbjct: 667 APDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPIT 726

Query: 276 ---------RLEIA--------------LELFRS------LPRRVLVADVVTYNIMIHGL 306
                    R E A              LEL R       + +R + AD+VTYN +I G 
Sbjct: 727 HKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGY 786

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF----VRINKPSKVIELLHKMKEKKV 362
           C    ++KA   +  M  + +APN+  + TL+ G     +      +  +L+ +M E+ +
Sbjct: 787 CTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGL 846

Query: 363 MPDASIVSMVVD 374
           +P+A+   ++V 
Sbjct: 847 VPNAATYDILVS 858



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 169/360 (46%), Gaps = 23/360 (6%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
           A A F  M+   + P +  +N+L++    +   ++ K ++ +M+  GV P V + NV++ 
Sbjct: 78  ASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVH 137

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRP-NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCK 153
            LCK G +D A   L  +   DV   +  TY+T++ GFC  G +++   L   M   G  
Sbjct: 138 SLCKVGDLDLA---LGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLC 194

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            D ++ NIL+ GYC+   V+ A  +   +V  G+   V+  NTL  G  E   +  A +L
Sbjct: 195 FDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATEL 254

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF-RTLGILKCELDIQ---------- 262
            E   R DV  D  TYNT +   CK G +  A  LF   LG  K E  ++          
Sbjct: 255 IENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEI 314

Query: 263 --------AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                    Y  LI   CK   +E +  L++ +    ++ DVVT + +++G C  G++ +
Sbjct: 315 KNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTE 374

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  LF +M E  + PN + + T+I+   +  +  +   L  +M  + +  D    + V+D
Sbjct: 375 AAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 175/373 (46%), Gaps = 44/373 (11%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V Y ++IDG  KEG    A ++  +MK +NI  DVV YN+LI GL     + + + +
Sbjct: 599 PDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYV 657

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M++ G+ P  +T+N I++  C  GK ++A  +L+ M    + PNA TY+ L+ G C 
Sbjct: 658 CSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCK 717

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR------------- 180
           TG +                   +++  L+  Y ++++ ++ L ++              
Sbjct: 718 TGFVPTP----------------ITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQK 761

Query: 181 ----EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
               EMV +GI   +VTYN L  G      VE ALK + +M  D +A + +TYNT + GL
Sbjct: 762 VVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGL 821

Query: 237 CKNGYIVEAVELFRTL-------GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
              G + E +E    L       G++    +   Y+ L+ G  + G  +  + L   +  
Sbjct: 822 SNAGLMEEMMEETEKLVSEMNERGLVP---NAATYDILVSGYGRVGNRKKTIILHIEMIT 878

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
           +  V  + TYN++I      G+M +A +L  D+      PN   +  L  G++ ++   +
Sbjct: 879 KGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPE 938

Query: 350 VIELLHKMKEKKV 362
           +   L +  E +V
Sbjct: 939 IDRSLKRSYEIEV 951



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 116/267 (43%), Gaps = 39/267 (14%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+G+   P+ +TYNTII+  C +G  + A  +  +MK   I P+ VTYN LI GLC    
Sbjct: 663 ELGLA--PDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKT-- 718

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDE---------ASRL--------L 109
                         G  P+ +T   ++    ++ K D+         AS L        L
Sbjct: 719 --------------GFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVL 764

Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK- 168
           D MV+R +  +  TY+ L+ G+C    + +A + +  M   G   +  +YN L+ G    
Sbjct: 765 DEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNA 824

Query: 169 ---NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
               + +EE   L  EM  +G+ P   TY+ L  G   +   +  + L  EM        
Sbjct: 825 GLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPT 884

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTL 252
             TYN  I    K+G ++EA EL   L
Sbjct: 885 LKTYNVLISDYAKSGKMIEARELLNDL 911



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 2/204 (0%)

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LI  Y  +     A + +  M + G+ PT+  +NTL         V     ++ +M    
Sbjct: 65  LIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCG 124

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           V  D  + N  +  LCK G +  A+   R   ++  ++D   YN +I G C+ G ++   
Sbjct: 125 VVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVV--DIDNVTYNTVIWGFCQKGLVDQGF 182

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            L   + +R L  D +T NI++ G C  G +  A  +  ++ +  V  +VI   TLI G+
Sbjct: 183 GLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGY 242

Query: 342 VRINKPSKVIELLHKMKEKKVMPD 365
                 S+  EL+       V  D
Sbjct: 243 CEAVLMSQATELIENSWRSDVKID 266


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 186/364 (51%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           P+T TYN ++ GLC+ G +  A  LF+QM +      D  +Y  LI GLC A   ++A R
Sbjct: 123 PDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACR 182

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +M     +P V T+ V++D LCK  ++ EA  LL  MV + V PN  TY+ L+ G C
Sbjct: 183 VFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLC 242

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+ +   +L   ME      D  +Y  +++G CK+ +V     +  E + KG+   V+
Sbjct: 243 QEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVL 302

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L  G  +   ++ AL + + M+R+ V     T+N  I G C  G + +A+     +
Sbjct: 303 TYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQM 362

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +   +N LI G C  G  +IAL L   +    ++ D  TY I I  LC++GQ+
Sbjct: 363 AGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQL 422

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++AH LF  +    +  + +I+ +L+HG+ ++        L+ KM  +  MPD    + +
Sbjct: 423 EEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTL 482

Query: 373 VDLL 376
           +D L
Sbjct: 483 IDGL 486



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 183/362 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P   TY  ++DGLCK   V +A+AL  +M  + + P+VVTYN+LI GLC    +++  
Sbjct: 192 CRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVT 251

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  +M  Q   P   T+  ++  LCK+GK+   +++L   + + V     TY+ L++G+
Sbjct: 252 KLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGY 311

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A ++   M+         ++N +I+G+C   +V +A++   +M   G+ P  
Sbjct: 312 CKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNT 371

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+N+L  G   + + + AL+L + M+   V  D  TY  FID LC  G + EA  LF  
Sbjct: 372 VTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSC 431

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L +   +     Y  L+ G C+ G ++ A  L   +     + DV TYN +I GLC   +
Sbjct: 432 LPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKR 491

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A DL   M++  + P    F  LI   +   K +   ++  +M      PD    ++
Sbjct: 492 LDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTL 551

Query: 372 VV 373
            +
Sbjct: 552 KI 553



 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 173/341 (50%), Gaps = 1/341 (0%)

Query: 37  ALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
           A F  M      P+  TYN+LI+  C      +A+     M + G+ P   T+N +M  L
Sbjct: 76  ASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGL 135

Query: 97  CKNGKMDEASRLLDLMVQR-DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHD 155
           C+ G +  A  L   M +R     + ++Y+ L+ G C  G+I+ A  +F  M    C+  
Sbjct: 136 CRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPG 195

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
             +Y +L++G CK + V EA +L  EMV+KG+ P VVTYN L  GL +  + +   KL E
Sbjct: 196 VHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLE 255

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
           +M+    + D  TY   + GLCK+G +    ++          L++  YN LI+G CK G
Sbjct: 256 KMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGG 315

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
            ++ AL++ + + R  +   V T+N +IHG C  G++ KA      M    ++PN + F 
Sbjct: 316 DMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFN 375

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +LI G   + +    + LL  M+E  V+PD    ++ +D L
Sbjct: 376 SLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDAL 416



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 169/383 (44%), Gaps = 20/383 (5%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V Y +++ G C+ G +D A  L  +M  EN  PDV TYN+LI GLC     + A  
Sbjct: 438 KAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAID 497

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM--DG 130
           L  +M  QG++P+  TFN+++ ++  + K  +A+++ + M+    +P+  TY+  +  D 
Sbjct: 498 LLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDW 557

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           F    K    +     M   G   D  +YN +I  Y      E+A   + +M+S  I P 
Sbjct: 558 FEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPD 617

Query: 191 VVTYNTLF--------------LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
             TY+ L                 ++++  V +  +LFE+M   D A   STY   + GL
Sbjct: 618 CTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGL 677

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           C    + E   L   +      LD    + L+   C       A E FRS+  +     +
Sbjct: 678 CNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGL 737

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
            +  +++ GLC+ G    A  +F DM       + +++  LI            +E+L  
Sbjct: 738 KSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSV 797

Query: 357 MKEKKVMPD----ASIVSMVVDL 375
           M  KK +      AS+V +V +L
Sbjct: 798 MDAKKCVASTRTYASLVRLVAEL 820



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 159/372 (42%), Gaps = 16/372 (4%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G    PNTVT+N++I G C  G    A  L   M+   + PD  TY   I  LC      
Sbjct: 364 GAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLE 423

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  LF  +  +G++   V +  ++   C+ G +D A  L++ M   +  P+  TY+TL+
Sbjct: 424 EAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLI 483

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C   +++RA +L   M+  G +    ++NILI     +K+  +A  +Y +M+S G K
Sbjct: 484 DGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCK 543

Query: 189 PTVVTYN-TLFLGLFEIHQVEHALKL-FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           P   TY   +    FE    E  + +   EM    V  D  TYN  I      G   +A 
Sbjct: 544 PDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAF 603

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLC--------------KSGRLEIALELFRSLPRRVL 292
                +  +  + D   Y+ L++ +C              K   +    ELF  +     
Sbjct: 604 FAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDA 663

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
              + TY  ++ GLCN  ++++   L L M+ N++  +  +   L+  +  +    +  E
Sbjct: 664 APGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACE 723

Query: 353 LLHKMKEKKVMP 364
               M  +   P
Sbjct: 724 QFRSMAHQSFQP 735



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 7/202 (3%)

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
           L+ +  M+  G  P   TYNTL     ++  +  A      M+   +A DT TYN  + G
Sbjct: 75  LASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLG 134

Query: 236 LCKNGYIVEAVELF----RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
           LC+ G +  A  LF    R  G      D  +Y  LI GLC +GR++ A  +F  + R  
Sbjct: 135 LCRAGLLAAACGLFVQMPRRWGAC---YDRYSYTILIKGLCAAGRIDDACRVFAKMSRGW 191

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
               V TY +++ GLC   ++ +A  L  +M    V PNV+ +  LI G  +  +   V 
Sbjct: 192 CRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVT 251

Query: 352 ELLHKMKEKKVMPDASIVSMVV 373
           +LL KM+ ++  PD    + VV
Sbjct: 252 KLLEKMEIQRHSPDCWTYTQVV 273



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 1/161 (0%)

Query: 206 QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYN 265
           ++ H L  F  M +     +  TYNT I+  CK   + +A      +       D   YN
Sbjct: 70  RLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYN 129

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVA-DVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
           CL+ GLC++G L  A  LF  +PRR     D  +Y I+I GLC  G++D A  +F  M  
Sbjct: 130 CLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSR 189

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
               P V  +  L+ G  ++ +  +   LL +M  K V+P+
Sbjct: 190 GWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPN 230



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 113/276 (40%), Gaps = 22/276 (7%)

Query: 12  CKPNTVTYNTII-----DGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           CKP+  TY   I     +G  KE  +D A    ++M    + PDV TYN++I     A  
Sbjct: 542 CKPDKQTYTLKISTDWFEGATKEENIDMA---VVEMHEAGVFPDVETYNAIIKAYVDAGL 598

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELC-----------KNGKMDEASRLLDL---M 112
             +A     +M+   + P   T++++++ +C           K  KM +   L +L   M
Sbjct: 599 KEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQM 658

Query: 113 VQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
            + D  P   TY  L+ G C   ++   E L   M+      D+   + L+  YC  +  
Sbjct: 659 CESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMY 718

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
            EA   +R M  +  +P + +   L  GL +      A+ +F +M       D   +   
Sbjct: 719 REACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLL 778

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLI 268
           ID L + G+    +E+   +   KC    + Y  L+
Sbjct: 779 IDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLV 814



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/207 (21%), Positives = 84/207 (40%), Gaps = 14/207 (6%)

Query: 14  PNTVTYNTIIDGLC----KEGF----------VDKAKALFLQMKGENINPDVVTYNSLIH 59
           P+  TY+ +++ +C     + F          V   + LF QM   +  P + TY +L+ 
Sbjct: 616 PDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLR 675

Query: 60  GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
           GLC+     E + L  +M    +       + ++   C      EA      M  +  +P
Sbjct: 676 GLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQP 735

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
              +   L+ G C +G    A  +F  M  +G  +D+V + +LI+   +       L + 
Sbjct: 736 GLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEML 795

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQ 206
             M +K    +  TY +L   + E+++
Sbjct: 796 SVMDAKKCVASTRTYASLVRLVAELNE 822


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/316 (35%), Positives = 172/316 (54%), Gaps = 3/316 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           NT T N +I+  C    +  A ++   +      P   T+ +LI GLC      EA +LF
Sbjct: 44  NTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLF 103

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M  +G QP V+T+  +++ LCK+ ++ EA  L   M+ + + PN FTYS+L+ G C+ 
Sbjct: 104 DKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCIL 163

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE---EALSLYREMVSKGIKPTV 191
           G    A  LF +M       D +++N L++  CK   ++   +A+ L+ EM  +G+ P  
Sbjct: 164 GHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDT 223

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  GL  + ++  A+ LF EM       D  TY    D LCKN  + EA+ L + 
Sbjct: 224 VTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKV 283

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DI  Y+ ++DG+C++G LE A +LF  L  + L  DV TY IMI+GLC  G 
Sbjct: 284 IEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGL 343

Query: 312 MDKAHDLFLDMEENAV 327
           + +A  LF +M+EN +
Sbjct: 344 LAEASKLFGEMDENDI 359



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/275 (36%), Positives = 157/275 (57%), Gaps = 3/275 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+T T+ T+I GLC EG + +A  LF +M GE   PDV+TY +LI+GLC      EA  
Sbjct: 77  QPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALS 136

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF +M+ +G+ P+  T++ ++  LC  G   EA RL   M+ R + P+  T++TL+D  C
Sbjct: 137 LFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALC 196

Query: 133 LTGKI---NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             G I   ++A  LF  M   G   D V+YN LI+G C    + +A++L+ EMV  G  P
Sbjct: 197 KEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIP 256

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            +VTY  LF  L + H++  A+ L + ++  ++  D   Y+  +DG+C+ G +  A +LF
Sbjct: 257 DLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLF 316

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
             L       D++ Y  +I+GLC+ G L  A +LF
Sbjct: 317 SKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLF 351



 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 181/352 (51%), Gaps = 3/352 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V ++ ++  + +        +L+ QM    I  +  T N LI+  CH N    A  +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++  G QPS  TF  ++  LC  GK+ EA +L D M     +P+  TY TL++G C 
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++  A  LF  M + G   ++ +Y+ LI+G C     +EA+ L+  M+ + I P  +T
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 194 YNTLFLGLFE---IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           +NTL   L +   I  ++ A+ LFEEM +  +  DT TYNT I GLC  G + +A+ LF 
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            + +     D+  Y  L D LCK+ RL  A+ L + +    L  D+  Y+I++ G+C  G
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAG 307

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           +++ A DLF  +    + P+V  +  +I+G  +    ++  +L  +M E  +
Sbjct: 308 ELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDI 359



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 174/329 (52%), Gaps = 3/329 (0%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P +V ++ L+  +     ++    L+ +M   G+  +  T N++++  C   ++  A  +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
           L  +++   +P+  T++TL+ G C+ GKI  A +LF  M   G + D ++Y  LING CK
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
           ++++ EALSL+ +M++KGI P   TY++L  GL  +   + A++LF  M    +  D  T
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 229 YNTFIDGLCKNGYIV---EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
           +NT +D LCK G I    +A+ LF  +       D   YN LI GLC  GRL  A+ LF 
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            +     + D+VTY I+   LC + ++ +A  L   +E   + P++ I+  ++ G  R  
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAG 307

Query: 346 KPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +     +L  K+  K + PD    +++++
Sbjct: 308 ELEAARDLFSKLSSKGLHPDVRTYTIMIN 336



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFV---DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           P+ +T+NT++D LCKEG +   DKA  LF +M  + + PD VTYN+LIHGLCH     +A
Sbjct: 183 PDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDA 242

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             LF EM+  G  P +VT+ ++ D LCKN ++ EA  LL ++   ++ P+   YS +MDG
Sbjct: 243 IALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDG 302

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  G++  A +LF  + S G   D  +Y I+ING C+   + EA  L+ EM    I+  
Sbjct: 303 MCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDIESY 362

Query: 191 VVTYNTLFLGLF 202
                  F G+F
Sbjct: 363 STFSRNAFKGIF 374



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 135/268 (50%), Gaps = 3/268 (1%)

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           M++    P+   +S L+         +    L+  M+S G  H+  + NILIN +C    
Sbjct: 1   MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           +  A S+  +++  G +P+  T+ TL  GL    ++  AL+LF++M  +    D  TY T
Sbjct: 61  LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 120

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            I+GLCK+  + EA+ LF  +       +   Y+ LI GLC  G  + A+ LF ++  R 
Sbjct: 121 LINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 180

Query: 292 LVADVVTYNIMIHGLCNDGQ---MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
           ++ D +T+N ++  LC +G    MDKA  LF +M +  + P+ + + TLIHG   + +  
Sbjct: 181 IMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 240

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVDLL 376
             I L H+M     +PD     ++ D L
Sbjct: 241 DAIALFHEMVVYGQIPDLVTYRILFDYL 268



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 1/82 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G    P+   Y+ ++DG+C+ G ++ A+ LF ++  + ++PDV TY  +I+GLC      
Sbjct: 286 GTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLA 345

Query: 69  EAKRLFFEMMDQGVQPSVVTFN 90
           EA +LF EM +  ++ S  TF+
Sbjct: 346 EASKLFGEMDENDIE-SYSTFS 366


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 198/364 (54%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC P    ++ +   L   G +++A   F +MK   + P   + N L+H        ++ 
Sbjct: 55  VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 114

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           KR F +M+  G +P+V T+N+++D +CK G ++ A  L + M  R + P+  TY++++DG
Sbjct: 115 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 174

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           F   G+++     F  M+ M C+ D ++YN LIN +CK  ++   L  YREM   G+KP 
Sbjct: 175 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 234

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VV+Y+TL     +   ++ A+K + +M+R  +  +  TY + ID  CK G + +A  L  
Sbjct: 235 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 294

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +  +  E ++  Y  LIDGLC + R++ A ELF  +    ++ ++ +YN +IHG     
Sbjct: 295 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 354

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            MD+A +L  +++   + P+++++ T I G   + K      ++++MKE  +  ++ I +
Sbjct: 355 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 414

Query: 371 MVVD 374
            ++D
Sbjct: 415 TLMD 418



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 191/390 (48%), Gaps = 36/390 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ +TYN +I+  CK G +      + +MKG  + P+VV+Y++L+   C      +A 
Sbjct: 196 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 255

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           + + +M   G+ P+  T+  ++D  CK G + +A RL + M+Q  V  N  TY+ L+DG 
Sbjct: 256 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 315

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++  AEELFG M++ G   +  SYN LI+G+ K K ++ AL L  E+  +GIKP +
Sbjct: 316 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 375

Query: 192 VTYNTLFLGLFEIHQVEHA-----------------------------------LKLFEE 216
           + Y T   GL  + ++E A                                   L L +E
Sbjct: 376 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 435

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF-RTLGILKCELDIQAYNCLIDGLCKSG 275
           M+  D+     T+   IDGLCKN  + +AV+ F R       + +   +  +IDGLCK  
Sbjct: 436 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 495

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           ++E A  LF  + ++ LV D   Y  ++ G    G + +A  L   M E  +  +++ + 
Sbjct: 496 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 555

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +L+ G    N+  K    L +M  + + PD
Sbjct: 556 SLVWGLSHCNQLQKARSFLEEMIGEGIHPD 585



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 187/403 (46%), Gaps = 36/403 (8%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           IG   +P   TYN +ID +CKEG V+ A+ LF +MK   + PD VTYNS+I G       
Sbjct: 122 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 181

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++    F EM D   +P V+T+N +++  CK GK+         M    ++PN  +YSTL
Sbjct: 182 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 241

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D FC  G + +A + +  M  +G   ++ +Y  LI+  CK   + +A  L  EM+  G+
Sbjct: 242 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 301

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +  VVTY  L  GL +  +++ A +LF +M    V  + ++YN  I G  K   +  A+E
Sbjct: 302 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 361

Query: 248 LFRTLGILKCELDIQAYNCLIDGLC----------------------------------- 272
           L   L     + D+  Y   I GLC                                   
Sbjct: 362 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 421

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN-AVAPNV 331
           KSG     L L   +    +   VVT+ ++I GLC +  + KA D F  +  +  +  N 
Sbjct: 422 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 481

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            IF  +I G  + N+      L  +M +K ++PD +  + ++D
Sbjct: 482 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 524



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 151/285 (52%), Gaps = 1/285 (0%)

Query: 4   GNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH 63
           GN  + V  + N VTY  +IDGLC    + +A+ LF +M    + P++ +YN+LIHG   
Sbjct: 293 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 352

Query: 64  ANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
           A + + A  L  E+  +G++P ++ +   +  LC   K++ A  +++ M +  ++ N+  
Sbjct: 353 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 412

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           Y+TLMD +  +G       L   M+ +  +   V++ +LI+G CKNK V +A+  +  + 
Sbjct: 413 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 472

Query: 184 SK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
           +  G++     +  +  GL + +QVE A  LFE+M +  +  D + Y + +DG  K G +
Sbjct: 473 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 532

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           +EA+ L   +  +  +LD+ AY  L+ GL    +L+ A      +
Sbjct: 533 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 577


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 192/364 (52%), Gaps = 3/364 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VTYNT++ G    G ++ A+ +  +MK +   PD+ TYN ++  +C+    +E  R
Sbjct: 257 KPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR 316

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              EM + G+ P  V++N+++     NG ++ A    D MV++ + P  +TY+TL+ G  
Sbjct: 317 ---EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLF 373

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  KI  AE L   +   G   D V+YNILINGYC++ + ++A +L+ EM++ GI+PT  
Sbjct: 374 MENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF 433

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY +L   L   ++   A +LFE++    +  D    NT +DG C  G +  A  L + +
Sbjct: 434 TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            ++    D   YNCL+ GLC  G+ E A EL   + RR +  D ++YN +I G    G  
Sbjct: 494 DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDT 553

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A  +  +M      P ++ +  L+ G  +  +     ELL +MK + ++P+ S    V
Sbjct: 554 KHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSV 613

Query: 373 VDLL 376
           ++ +
Sbjct: 614 IEAM 617



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 185/386 (47%), Gaps = 38/386 (9%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +T+ ++ ++   C+   VD+A   F  MK +   P   T N ++  L   N    A   +
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M    ++ +V TFN++++ LCK GK+ +A   L +M    ++P   TY+TL+ GF L 
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273

Query: 135 GKI--------------------------------NRAEELFGSMESMGCKHDDVSYNIL 162
           G+I                                 RA E+   M+ +G   D VSYNIL
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNIL 333

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           I G   N ++E A +   EMV +G+ PT  TYNTL  GLF  +++E A  L  E++   +
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVEL---FRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
             D+ TYN  I+G C++G   +A  L     T GI   +     Y  LI  LC+  +   
Sbjct: 394 VLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF---TYTSLIYVLCRKNKTRE 450

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A ELF  +  + +  D+V  N ++ G C  G MD+A  L  +M+  ++ P+ + +  L+ 
Sbjct: 451 ADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMR 510

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPD 365
           G     K  +  EL+ +MK + + PD
Sbjct: 511 GLCGEGKFEEARELMGEMKRRGIKPD 536



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 81/152 (53%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G   KP+ V  NT++DG C  G +D+A +L  +M   +INPD VTYN L+ GLC    +
Sbjct: 459 VGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKF 518

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA+ L  EM  +G++P  +++N ++    K G    A  + D M+     P   TY+ L
Sbjct: 519 EEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNAL 578

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
           + G     +   AEEL   M+S G   +D S+
Sbjct: 579 LKGLSKNQEGELAEELLREMKSEGIVPNDSSF 610


>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/356 (32%), Positives = 196/356 (55%), Gaps = 2/356 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +  TY+T++ GLC EG +D+A +L  +M+ E   P+ V +N LI  LC   D + A 
Sbjct: 31  CVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRAS 90

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M  +G  P+ VT+N ++  LC  GK+D+A  LL+ MV     PN  T+ TL+DGF
Sbjct: 91  KLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGF 150

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+      +  S+E  G + ++ SY+ LI+G  K  + E  + L++EMV KG KP  
Sbjct: 151 VKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNT 210

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           + Y+ L  GL    + + A +   EM+      ++ TY++ + G  + G I +A+ +++ 
Sbjct: 211 IVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKE 270

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C      Y+ LI+GLCK+G+L+ AL +++ +  R +  DVV Y+ MIHG CN   
Sbjct: 271 MTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQL 330

Query: 312 MDKAHDLFLDM--EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +++   LF  M      + P+V+ +  L++ F   N  S+ I++L+ M ++   PD
Sbjct: 331 VEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPD 386



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 174/323 (53%), Gaps = 6/323 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V +N +I  LCK+G + +A  L   M  +   P+ VTYNSL+HGLC     ++A  L
Sbjct: 68  PNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSL 127

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+     P+ +TF  ++D   K+G+  +  R+L  + ++  R N F+YS+L+ G   
Sbjct: 128 LNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFK 187

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK     +L+  M   GCK + + Y+ LI+G C+  + +EA     EM +KG  P   T
Sbjct: 188 EGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFT 247

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y++L  G FE   +  A+ +++EM  +D       Y+  I+GLCKNG + EA+ +++ + 
Sbjct: 248 YSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQML 307

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL----PRRVLVADVVTYNIMIHGLCND 309
               +LD+ AY+ +I G C +  +E  ++LF  +    P+  L  DVVTYNI+++  C  
Sbjct: 308 SRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPK--LQPDVVTYNILLNAFCTK 365

Query: 310 GQMDKAHDLFLDMEENAVAPNVI 332
             + +A D+   M +    P+ I
Sbjct: 366 NSVSRAIDILNTMLDQGCDPDFI 388



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 134/300 (44%), Gaps = 72/300 (24%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVT------------------ 53
           C PN VTYN+++ GLC +G +DKA +L  +M      P+ +T                  
Sbjct: 101 CVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGV 160

Query: 54  -----------------YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
                            Y+SLI GL          +L+ EM+++G +P+ + ++ ++D L
Sbjct: 161 RVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGL 220

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           C+ GK DEA   L  M  +   PN+FTYS+LM G+   G I++A  ++  M    C H +
Sbjct: 221 CREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHE 280

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIK---------------------------- 188
           V Y+ILING CKN +++EAL ++++M+S+GIK                            
Sbjct: 281 VCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQ 340

Query: 189 ---------PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
                    P VVTYN L       + V  A+ +   M       D  T + F+  L  N
Sbjct: 341 MLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDN 400



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 23/151 (15%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN--INPDVVTYNSLIHGLCHANDWNEA 70
           K + V Y+++I G C    V++   LF QM   N  + PDVVTYN L++  C  N  + A
Sbjct: 312 KLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRA 371

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKN------GK--MDE-------------ASRLL 109
             +   M+DQG  P  +T ++ +  L  N      G+  +DE             AS ++
Sbjct: 372 IDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLIKRQRTVGASNII 431

Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           ++M+Q+ + P   T++  +   C   K+ + 
Sbjct: 432 EVMLQKFLLPKPSTWALAVQQLCKPMKVRKT 462


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 193/363 (53%), Gaps = 4/363 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P T  +N ++    + G +  A+ +F +M+  ++ P VVT+N+LI G+C A D +    L
Sbjct: 184 PETRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLISGMCRARDLDAVDGL 242

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + EM D GV+P V T+  ++   C+ G+M+ A ++ + M    V PNA  ++TL+D  C 
Sbjct: 243 YKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCK 302

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +N   +L+  M   G   D V+YN L+NG C+ + ++ A S+  EM + G+KP  VT
Sbjct: 303 EGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVT 362

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G  +  +++ A+ + ++M   +V+ D  TY   I GL K G  V+A  + R + 
Sbjct: 363 YTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMM 422

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E D   Y  +ID  C+ G ++   +L + +  +     VVTYN++++GLC  GQM 
Sbjct: 423 EAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMK 482

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L   M    V+P+ I +  L+ G  +  K +   EL      K ++PD ++ + ++
Sbjct: 483 NADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEEL---ESSKGMVPDFAVYTSLI 539

Query: 374 DLL 376
             L
Sbjct: 540 SEL 542



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 172/337 (51%), Gaps = 4/337 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VT+NT+I G+C+   +D    L+ +M    + PDV TY +LI G C       A +
Sbjct: 217 QPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVK 276

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM D GV P+ V F  ++D  CK G ++    L   M  R V P+   Y+ L++G C
Sbjct: 277 MFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLC 336

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +  AE +   M++ G K D V+Y  LI+G CK+ +++ A+ + ++M  K +    V
Sbjct: 337 RARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEV 396

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L  GL +  +   A ++  EM    +  D +TY   ID  C+ G +    +L + +
Sbjct: 397 TYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEM 456

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +  +  YN +++GLCK G+++ A  L  ++    +  D +TYNI++ G C  G++
Sbjct: 457 QNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKV 516

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
             + +L        + P+  ++ +LI    +  KP+K
Sbjct: 517 ANSEEL---ESSKGMVPDFAVYTSLISELAK-KKPAK 549



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 155/340 (45%), Gaps = 34/340 (10%)

Query: 69  EAKRLFFEMMDQG----------------------------------VQPSVVTFNVIMD 94
           EA   + +++D G                                  VQP+VVTFN ++ 
Sbjct: 169 EAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQPTVVTFNTLIS 228

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            +C+   +D    L   M    V+P+ +TY  L+ GFC TG++  A ++F  M   G   
Sbjct: 229 GMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNP 288

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           + V +  LI+ +CK   V   + LY++M  +G+ P +V YN L  GL     ++ A  + 
Sbjct: 289 NAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIV 348

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           EEM+   +  D  TY T IDG CK+G +  A+++ + +   +  LD   Y  LI GL K+
Sbjct: 349 EEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKA 408

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           GR   A  + R +    L  D  TY ++I   C  G +     L  +M+     P V+ +
Sbjct: 409 GRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTY 468

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +++G  ++ +      LLH M    V PD    ++++D
Sbjct: 469 NVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLD 508


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 190/396 (47%), Gaps = 35/396 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V YNT+IDG C+ G +  A  +   M    I+P+ VT NSLI G C +N    A+ L
Sbjct: 300 PNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHL 359

Query: 74  FFEMM------DQGVQPSVV-----------------------------TFNVIMDELCK 98
             EM+      +QG   SV+                                +++  LC+
Sbjct: 360 LEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQ 419

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           NGK  EA  L   ++++    N  T + L+ G C  G    A +L   M   G   D +S
Sbjct: 420 NGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSIS 479

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN LI   CK  +VEE   L  EMV +GI+P + TYN L  GL  + ++E A  L+ E +
Sbjct: 480 YNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECK 539

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
           ++    D  TY   IDG CK   + E  +LF+ +  +K E +   Y  LI   C++G + 
Sbjct: 540 KNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMR 599

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A  L   +  R +     TY+ +IHGL N G +D A+ L  +M +  ++PNV+ +  LI
Sbjct: 600 EAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALI 659

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            G+ ++ +  KV  +L +M    V P+    +++++
Sbjct: 660 GGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMIN 695



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 183/336 (54%), Gaps = 3/336 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           NTVT N +I GLC+ G  ++A  L  +M    +  D ++YN+LI   C      E  +L 
Sbjct: 441 NTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLK 500

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ +G+QP + T+N+++  LC  GK++EA  L     +    P+A+TY  ++DG+C  
Sbjct: 501 EEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKA 560

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            ++   E+LF  M +M  + + V Y  LI  YC+N  + EA  L  +M S+GI  T  TY
Sbjct: 561 NRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATY 620

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           ++L  GL  I  V+ A +L +EM+++ ++ +   Y   I G CK G + +   + + + I
Sbjct: 621 SSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSI 680

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                +   Y  +I+G CK G ++ A +L   + ++ +V D VTYN + +G C +G+M++
Sbjct: 681 NNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEE 740

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
           A  +   M    ++ + I + TLI G+   +KP  V
Sbjct: 741 ALKVCDLMSTGGISLDDITYTTLIDGW---HKPLTV 773



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 201/395 (50%), Gaps = 35/395 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   ++T+++  C  G VD A  LF +M+   + P+VVTYN++IHGLC     +EA + 
Sbjct: 195 PDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQF 254

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M  + V+PS+VT+ V+++ L K  + DEA+ +L  M  R   PN   Y+TL+DG+C 
Sbjct: 255 KEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCR 314

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG------- 186
            G I+ A ++   M S G   + V+ N LI GYCK+ ++E A  L  EM++ G       
Sbjct: 315 IGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGT 374

Query: 187 ----------------------------IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
                                        KP       L  GL +  +   A++L+  + 
Sbjct: 375 FTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLL 434

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
               AA+T T N  I GLC+ G   EA +L + +      LD  +YN LI   CK G++E
Sbjct: 435 EKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVE 494

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
              +L   + RR +  D+ TYN+++HGLCN G++++A  L+ + ++N   P+   +  +I
Sbjct: 495 EGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMI 554

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            G+ + N+  +  +L  +M   K+  +A +   ++
Sbjct: 555 DGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLI 589



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 186/362 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN      ++ GLC+ G   +A  L+ ++  +    + VT N+LIHGLC A    EA +
Sbjct: 404 KPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAK 463

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+++G+    +++N ++   CK GK++E  +L + MV+R ++P+ +TY+ L+ G C
Sbjct: 464 LLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLC 523

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GKI  A  L+   +  G   D  +Y I+I+GYCK   VEE   L++EMV+  I+   V
Sbjct: 524 NMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAV 583

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y TL     E   +  A +L ++M+   +   ++TY++ I GL   G +  A +L   +
Sbjct: 584 VYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEM 643

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++  Y  LI G CK G++     + + +    +  + +TY IMI+G C  G M
Sbjct: 644 RKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNM 703

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A  L  +M +  + P+ + +  L +GF +  K  + +++   M    +  D    + +
Sbjct: 704 KAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTL 763

Query: 373 VD 374
           +D
Sbjct: 764 ID 765



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 190/396 (47%), Gaps = 35/396 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T N ++  L K   V  +  +F  M    + PDV  ++++++  C     ++A  L
Sbjct: 160 PSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIEL 219

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M   GV P+VVT+N I+  LCKNG++DEA +  + M +  V+P+  TY  L++G   
Sbjct: 220 FRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVK 279

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             + + A  +   M   G   ++V YN LI+GYC+   +  AL +  +M+S GI P  VT
Sbjct: 280 LERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVT 339

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI-------------------- 233
            N+L  G  + +Q+EHA  L EEM       +  T+ + I                    
Sbjct: 340 CNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEML 399

Query: 234 ---------------DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                           GLC+NG   EA+EL+  L       +    N LI GLC++G  E
Sbjct: 400 LRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKE 459

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +L + +  R LV D ++YN +I   C +G++++   L  +M    + P++  +  L+
Sbjct: 460 EAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLL 519

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           HG   + K  +   L H+ K+    PDA    +++D
Sbjct: 520 HGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMID 555



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 133/261 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TYN ++ GLC  G +++A  L+ + K     PD  TY  +I G C AN   E ++
Sbjct: 509 QPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEK 568

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM+   ++ + V +  ++   C+NG M EA RL D M  R +   + TYS+L+ G  
Sbjct: 569 LFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLS 628

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A +L   M   G   + V Y  LI GYCK  ++ +  S+ +EM    + P  +
Sbjct: 629 NIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKI 688

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  +  G  ++  ++ A KL  EM +  +  D  TYN   +G CK G + EA+++   +
Sbjct: 689 TYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLM 748

Query: 253 GILKCELDIQAYNCLIDGLCK 273
                 LD   Y  LIDG  K
Sbjct: 749 STGGISLDDITYTTLIDGWHK 769



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 173/371 (46%), Gaps = 35/371 (9%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           LF  +  + + P + T N L+  L  AN+   + ++F  M   GV P V  F+ +++  C
Sbjct: 149 LFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFC 208

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
             G++D+A  L   M +  V PN  TY+ ++ G C  G+++ A +    ME    K   V
Sbjct: 209 TGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLV 268

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y +LING  K +  +EA  + +EM  +G  P  V YNTL  G   I  +  AL++ ++M
Sbjct: 269 TYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDM 328

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL----GI--------------LKCEL 259
             + ++ ++ T N+ I G CK+  +  A  L   +    G+              LKC  
Sbjct: 329 ISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRF 388

Query: 260 DIQ-----------------AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
           D                       L+ GLC++G+   A+EL+  L  +   A+ VT N +
Sbjct: 389 DSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNAL 448

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           IHGLC  G  ++A  L  +M E  +  + I + TLI    +  K  +  +L  +M  + +
Sbjct: 449 IHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGI 508

Query: 363 MPDASIVSMVV 373
            PD    +M++
Sbjct: 509 QPDMYTYNMLL 519



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 106/216 (49%)

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
           ELF  + + G      + N L++   K  EV+ +  ++  M   G+ P V  ++T+    
Sbjct: 148 ELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAF 207

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
               +V+ A++LF +M++  VA +  TYN  I GLCKNG + EA +    +   + +  +
Sbjct: 208 CTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSL 267

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
             Y  LI+GL K  R + A  + + +  R    + V YN +I G C  G +  A  +  D
Sbjct: 268 VTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDD 327

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           M  N ++PN +   +LI G+ + N+      LL +M
Sbjct: 328 MISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEM 363



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 87/164 (53%)

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
            +LF  +    +     T N  +  L K   +  + ++F  +       D+  ++ +++ 
Sbjct: 147 FELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNA 206

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
            C  GR++ A+ELFR + +  +  +VVTYN +IHGLC +G++D+A      ME+  V P+
Sbjct: 207 FCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPS 266

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           ++ +  LI+G V++ +  +   +L +M ++   P+  + + ++D
Sbjct: 267 LVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLID 310



 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 42/87 (48%)

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           +  ELF  L  + L   + T N ++  L    ++  ++ +F  M    V P+V +F T++
Sbjct: 145 VVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMV 204

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPD 365
           + F    +    IEL  KM++  V P+
Sbjct: 205 NAFCTGGRVDDAIELFRKMEKVGVAPN 231


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 205/383 (53%), Gaps = 22/383 (5%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G+V  P+  TY  +ID  CK G + +A+  F +M  +   P+VVTY +LIH    A    
Sbjct: 490 GIV--PSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMP 547

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR---------- 118
            A  LF  M+ +G +P+VVT+  ++D  CK G++++A ++   M + D+           
Sbjct: 548 VADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARM-RGDIESSDMDKYFKL 606

Query: 119 -------PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
                  PN  TY  L+DG C   ++  A EL  +M + GC+ + + Y+ +I+G+CK  +
Sbjct: 607 DHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGK 666

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           +++A  ++ +M  +G  P + TY++    LF+ ++++  LK+  +M  +    +   Y  
Sbjct: 667 LQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTE 726

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            +DGLCK G   EA +L   +    C  ++  Y  +IDG  KSG++E  LELFR +  + 
Sbjct: 727 MVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKG 786

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
              + +TY ++I+  C++G +D+A+ L  +M++     +++    +I GF +    S  I
Sbjct: 787 CAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITS--I 844

Query: 352 ELLHKMKEKKVMPDASIVSMVVD 374
            LL ++ E + +P  S+  +++D
Sbjct: 845 GLLDELSENESVPVDSLYRILID 867



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 188/375 (50%), Gaps = 18/375 (4%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           ++GVV   N V  +     LC  G  D+A  +  +M G+   PD  TY+ +I  LC A+ 
Sbjct: 418 DLGVVL--NKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASK 475

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A  LF EM   G+ PSV T+ +++D  CK G + +A +  D M+ +   PN  TY+ 
Sbjct: 476 VEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTA 535

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM---- 182
           L+  +    ++  A+ELF  M   GCK + V+Y  LI+G+CK  ++E+A  +Y  M    
Sbjct: 536 LIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDI 595

Query: 183 ----VSKGIK--------PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
               + K  K        P V+TY  L  GL + ++V+ A +L + M       +   Y+
Sbjct: 596 ESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYD 655

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
             IDG CK G + +A E+F  +       ++  Y+  ID L K  RL++ L++   +   
Sbjct: 656 AVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLEN 715

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
               +VV Y  M+ GLC  G+ D+A+ L L MEE    PNV+ +  +I GF +  K  + 
Sbjct: 716 SCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQC 775

Query: 351 IELLHKMKEKKVMPD 365
           +EL   M  K   P+
Sbjct: 776 LELFRDMCSKGCAPN 790



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 192/385 (49%), Gaps = 22/385 (5%)

Query: 12  CKPNTVTYNTIIDGLCK------EGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           C+P  + YN  I  +C          +D  +  + +M    +  + V  ++    LC A 
Sbjct: 380 CQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAG 439

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            +++A ++  EMM +G  P   T++ ++  LC   K+++A  L + M +  + P+ +TY+
Sbjct: 440 KFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYT 499

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+D FC  G I +A + F  M   GC  + V+Y  LI+ Y K K++  A  L+  M+ +
Sbjct: 500 ILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLE 559

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS----------------TY 229
           G KP VVTY  L  G  +  Q+E A +++  M+ D  ++D                  TY
Sbjct: 560 GCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITY 619

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
              +DGLCK   + EA EL  T+    CE +   Y+ +IDG CK G+L+ A E+F  +  
Sbjct: 620 GALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSE 679

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
           R    ++ TY+  I  L  D ++D    +   M EN+  PNV+I+  ++ G  +I K  +
Sbjct: 680 RGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDE 739

Query: 350 VIELLHKMKEKKVMPDASIVSMVVD 374
             +L+ KM+EK   P+    + ++D
Sbjct: 740 AYKLMLKMEEKGCNPNVVTYTAMID 764



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 201/424 (47%), Gaps = 65/424 (15%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN----------------PDVVTYN 55
           CKPN VTY  +IDG CK G ++KA  ++ +M+G+  +                P+V+TY 
Sbjct: 561 CKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYG 620

Query: 56  SLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           +L+ GLC AN   EA  L   M+  G +P+ + ++ ++D  CK GK+ +A  +   M +R
Sbjct: 621 ALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSER 680

Query: 116 DVRPNAFTYST-----------------------------------LMDGFCLTGKINRA 140
              PN +TYS+                                   ++DG C  GK + A
Sbjct: 681 GYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEA 740

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
            +L   ME  GC  + V+Y  +I+G+ K+ ++E+ L L+R+M SKG  P  +TY  L   
Sbjct: 741 YKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINH 800

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
                 ++ A KL +EM++        ++   I+G  +    + ++ L   L   +    
Sbjct: 801 CCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQE--FITSIGLLDELSENESVPV 858

Query: 261 IQAYNCLIDGLCKSGRLEIALELFR---SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
              Y  LID   K+GRLE+AL+L     S P    V++   Y  +I  L +  ++DKA +
Sbjct: 859 DSLYRILIDNYIKAGRLEVALDLLEEISSSPSHA-VSNKYLYASLIENLSHASKVDKALE 917

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL--------LHKMKEKKVMPDASIV 369
           L+  M    V P + I V LI G ++++K  + ++L        +H ++EK       +V
Sbjct: 918 LYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDSICQMDIHWLQEKATGRTEEMV 977

Query: 370 SMVV 373
            +V+
Sbjct: 978 KLVI 981



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 189/421 (44%), Gaps = 59/421 (14%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTY------------------- 54
           P+TV YN ++ GLC+    ++A  +  +M+  +  P+VVTY                   
Sbjct: 277 PDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRI 336

Query: 55  ----------------NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                           NSLIH  C + D++ A +LF +M+  G QP  + +N+ +  +C 
Sbjct: 337 LSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCS 396

Query: 99  NGKMDEASRLLDL-------MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           N +   +S +LDL       M+   V  N    S      C  GK ++A ++   M   G
Sbjct: 397 NEE-QPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKG 455

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
              DD +Y+ +I   C   +VE+A SL+ EM   GI P+V TY  L     +   ++ A 
Sbjct: 456 FVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQAR 515

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           K F+EM       +  TY   I    K   +  A ELF  + +  C+ ++  Y  LIDG 
Sbjct: 516 KWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGH 575

Query: 272 CKSGRLEIALELFRSLPRRVLVAD----------------VVTYNIMIHGLCNDGQMDKA 315
           CK+G++E A +++  +   +  +D                V+TY  ++ GLC   ++ +A
Sbjct: 576 CKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEA 635

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
           H+L   M  +   PN I++  +I GF +I K     E+  KM E+   P+    S  +D 
Sbjct: 636 HELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDC 695

Query: 376 L 376
           L
Sbjct: 696 L 696



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/402 (23%), Positives = 162/402 (40%), Gaps = 55/402 (13%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N ++   C+ G+ + A     ++K     P   TYN+LI     A+  + A  +  EM+ 
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS 239

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLD----------------------------- 110
                   T +     LCK GK  EA  L+D                             
Sbjct: 240 YAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAM 299

Query: 111 ----LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
                M      PN  TY  L+ G    G++ R + +   M + GC  +   +N LI+ Y
Sbjct: 300 DILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAY 359

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL-------KLFEEMQR 219
           CK+++   A  L+++M+  G +P  + YN +F+G    ++ + +        K + EM  
Sbjct: 360 CKSRDYSYAYKLFKKMIKCGCQPGYLVYN-IFIGSVCSNEEQPSSDILDLVEKAYSEMLD 418

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL-------DIQAYNCLIDGLC 272
             V  +    + F   LC  G   +A ++        CE+       D   Y+ +I  LC
Sbjct: 419 LGVVLNKVNVSNFARCLCGAGKFDQAFKII-------CEMMGKGFVPDDSTYSKVIGFLC 471

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
            + ++E A  LF  + R  +V  V TY I+I   C  G + +A   F +M      PNV+
Sbjct: 472 DASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVV 531

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +  LIH +++  +     EL   M  +   P+    + ++D
Sbjct: 532 TYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALID 573


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 182/376 (48%), Gaps = 13/376 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN+ TY  ++DGLCK G    A  +F +M    I PDV  Y  L+  LC+     +A 
Sbjct: 210 CLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAG 269

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL   M + G  P  VT+ V +  LCK G++DEA    +L+           YS L+DG 
Sbjct: 270 RLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGL 329

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+ +     +  M       D   Y ILI  + +    ++A  L  EM  KG  P  
Sbjct: 330 FQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDT 389

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             YNTL   LF++  ++ A  L  EM +++V  D++T+N  I GLCK G I +A+++F  
Sbjct: 390 FCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDE 449

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL-----PRRVL--------VADVVT 298
           +G   C   +  YN LIDGL ++G LE A  LF  +     P   L        V D  +
Sbjct: 450 MGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTES 509

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
              ++ G+C  GQ+ KA+ L   + E+ V P+V+ + TLI+G  +       + L  +++
Sbjct: 510 LRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQ 569

Query: 359 EKKVMPDASIVSMVVD 374
            K + PD      ++D
Sbjct: 570 LKGISPDEITYGTLID 585



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 169/357 (47%), Gaps = 51/357 (14%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T  YNT++  L   G +D+A++L  +M   N+  D  T+N +I GLC     ++A ++
Sbjct: 387 PDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQV 446

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL------ 127
           F EM + G  P+V+T+N ++D L + G ++EA R+L   ++    P+ F   TL      
Sbjct: 447 FDEMGEHGCHPTVMTYNALIDGLYRAGMLEEA-RMLFHKMEMGNNPSLFLRLTLGANQVR 505

Query: 128 --------MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
                   +DG C +G++ +A +L   +   G   D V+YN LING CK K ++ AL L+
Sbjct: 506 DTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLF 565

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK- 238
           +E+  KGI P  +TY TL  GL+  H+   A  LF+ + R         YNT +  LC+ 
Sbjct: 566 KELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRM 625

Query: 239 -----------------------------------NGYIVEAVELFRTLGILKCELDIQA 263
                                              +G++ E V+    +  +   L+   
Sbjct: 626 KKLSQAINLWLDYLPKKYNLSPEDEVIANARKCFEDGFLDETVKELIKIDQVYGSLNPNP 685

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           Y   + GLC+  +++ AL +F  L    +V       ++I+ LC D  ++ A D+ +
Sbjct: 686 YTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYLCWDRNLNAAVDIMM 742



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 181/385 (47%), Gaps = 18/385 (4%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G    P+   Y  +I    + G    A  L  +MK +   PD   YN+L+  L    + 
Sbjct: 346 LGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNI 405

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           + A+ L  EM+   V     T N+++  LCK G +D+A ++ D M +    P   TY+ L
Sbjct: 406 DRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNAL 465

Query: 128 MDGFCLTGKINRAEELFGSME-----------SMGCKH--DDVSYNILINGYCKNKEVEE 174
           +DG    G +  A  LF  ME           ++G     D  S   L++G C++ +V +
Sbjct: 466 IDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLK 525

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           A  L R ++  G+ P VVTYNTL  GL +   ++ AL+LF+E+Q   ++ D  TY T ID
Sbjct: 526 AYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLID 585

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS-LPRRVLV 293
           GL +     +A  LF+ +        +  YN ++  LC+  +L  A+ L+   LP++  +
Sbjct: 586 GLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNL 645

Query: 294 A--DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           +  D V  N        DG +D+     + +++   + N   +   + G  ++ K    +
Sbjct: 646 SPEDEVIAN--ARKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDAL 703

Query: 352 ELLHKMKEKKVMPDASIVSMVVDLL 376
            + H ++E  ++   +  +++++ L
Sbjct: 704 RIFHILEEFGIVVTPACCALLINYL 728



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 133/293 (45%)

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           G+      F  ++      G+  EA      M   D RP AF Y+ +       G I  A
Sbjct: 139 GLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLA 198

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
             L+  M S GC  +  +Y +L++G CK     +AL ++ EM+ +GI P V  Y  L   
Sbjct: 199 LALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSS 258

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
           L    ++E A +L   M+ +    D  TY  F+ GLCK G + EA   F  L      L 
Sbjct: 259 LCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLG 318

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           +  Y+CLIDGL ++GR +  L  +  +  + +  D+  Y I+I      G+   A  L  
Sbjct: 319 LIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLD 378

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +M++    P+   + TL+     +    +   L+ +M +  V+ D++  ++++
Sbjct: 379 EMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMI 431



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 42/217 (19%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E GVV  P+ VTYNT+I+GLCK   +D A  LF +++ + I+PD +TY +LI GL  A+ 
Sbjct: 535 ESGVV--PDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHR 592

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL-LDLMVQR---------- 115
            N+A  LF  ++  G  PS+  +N +M  LC+  K+ +A  L LD + ++          
Sbjct: 593 ENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVI 652

Query: 116 ---------------------------DVRPNAFTYSTLMDGFCLTGKINRAEELFGSME 148
                                       + PN +T   +  G C   KI+ A  +F  +E
Sbjct: 653 ANARKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIWVI--GLCQVRKIDDALRIFHILE 710

Query: 149 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
             G         +LIN  C ++ +  A+ +    +SK
Sbjct: 711 EFGIVVTPACCALLINYLCWDRNLNAAVDIMMYTLSK 747


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 188/368 (51%), Gaps = 9/368 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC----HANDWNE 69
           P + ++N ++ G    G V  A A    M+  + +    TYN ++ GLC     AN   +
Sbjct: 100 PTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQ 159

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A   F EM   GV+P + ++++++  L  +G+M EA  L   M      P+  TY+ LMD
Sbjct: 160 AMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMD 216

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+C  G+   A+ L   +   G + +  +Y+I+IN YCK  +VEEA  ++ +M+     P
Sbjct: 217 GYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVP 276

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN-GYIVEAVEL 248
             VT+NTL  G  +   +E A+KLF EM++    A   TYNT ID LCK  G +  AV+L
Sbjct: 277 NAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDL 336

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  L        I  YN LI G C + RL  A++ F  +  +    +V+TY+I+I GLC 
Sbjct: 337 FNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKC-APNVITYSILIDGLCK 395

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
             +M +A     DM+ +   P V+ +  LI+GF +  +    +    KMK     P+  I
Sbjct: 396 VRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVI 455

Query: 369 VSMVVDLL 376
            + ++D L
Sbjct: 456 FNTLIDGL 463



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/355 (33%), Positives = 184/355 (51%), Gaps = 9/355 (2%)

Query: 16  TVTYNTIIDGLCKEG----FVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           T TYN ++ GLC E      +++A   F +MK   + PD+ +Y+ L+  L  +    EA 
Sbjct: 137 TGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAH 196

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M      P ++T+NV+MD  CK G+  EA  L+  +++    PN FTYS +++ +
Sbjct: 197 ALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCY 253

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K+  A E+F  M    C  + V++N LI G+CK   +E+A+ L+ EM   G K T+
Sbjct: 254 CKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATI 313

Query: 192 VTYNTLFLGLFEIHQ-VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VTYNTL   L +    V  A+ LF +++   +     TYN+ I G C    + EA++ F 
Sbjct: 314 VTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFD 373

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +   KC  ++  Y+ LIDGLCK  R++ A +    +        VVTY  +I+G C  G
Sbjct: 374 EMEG-KCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCG 432

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++  A   F  M+    APN +IF TLI G  +  + +  + LL  M  +   PD
Sbjct: 433 ELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPD 487



 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 187/369 (50%), Gaps = 41/369 (11%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  +Y+ ++  L   G + +A ALF  M     +PD++TYN L+ G C      EA+ 
Sbjct: 173 EPDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQS 229

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  E++  G +P+V T+++I++  CK  K++EA  +   M++ +  PNA T++TL+ GFC
Sbjct: 230 LMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFC 289

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE-VEEALSLYREMVSKGIKPTV 191
             G +  A +LF  ME +GCK   V+YN LI+  CK +  V  A+ L+ ++   G+ PT+
Sbjct: 290 KAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTI 349

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQ---------------------RDDVAADT---- 226
           VTYN+L  G  +  ++  A++ F+EM+                     R   AA T    
Sbjct: 350 VTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDM 409

Query: 227 ---------STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
                     TY   I+G CK G +  A+  F  + +  C  +   +N LIDGLCK+ R 
Sbjct: 410 KAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERA 469

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
              L L   +       DV+TYN +I GLC+  +++ A  LF  M   A APNV  F  L
Sbjct: 470 NDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFL 526

Query: 338 IHGFVRINK 346
           I G     K
Sbjct: 527 IRGLCAQKK 535



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/308 (35%), Positives = 173/308 (56%), Gaps = 5/308 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TY+ II+  CK   V++A  +F++M   N  P+ VT+N+LI G C A    +A +
Sbjct: 240 EPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIK 299

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKN-GKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           LF EM   G + ++VT+N ++D LCK  G +  A  L + +    + P   TY++L+ GF
Sbjct: 300 LFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF 359

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +++ A + F  ME   C  + ++Y+ILI+G CK + ++EA     +M + G  PTV
Sbjct: 360 CDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTV 418

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY  L  G  +  +++ AL  FE+M+    A +T  +NT IDGLCK     + + L   
Sbjct: 419 VTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCH 478

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ D+  YNCLI GLC + R+E A  LF  +       +V T+N +I GLC   +
Sbjct: 479 MHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKK 535

Query: 312 MDKAHDLF 319
           +++A ++ 
Sbjct: 536 VEEARNIL 543



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 117/391 (29%), Positives = 187/391 (47%), Gaps = 44/391 (11%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN +I G CK G + +A ++F  MK   + P+  T N+L+ GLC     + A +L
Sbjct: 30  PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 89

Query: 74  FFEMMDQGVQPSVV-----------------------------------TFNVIMDELCK 98
           F EM      P+                                     T+N+++  LC 
Sbjct: 90  FREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCW 149

Query: 99  NGK----MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
             K    +++A      M    V P+  +Y  L+     +G++  A  LF +M    C  
Sbjct: 150 ENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSP 206

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D ++YN+L++GYCK  +  EA SL +E++  G +P V TY+ +     ++ +VE A ++F
Sbjct: 207 DIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVF 266

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
            +M   +   +  T+NT I G CK G + +A++LF  +  + C+  I  YN LID LCK 
Sbjct: 267 MKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKK 326

Query: 275 -GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
            G +  A++LF  L    L   +VTYN +I G C+  ++ +A   F +M E   APNVI 
Sbjct: 327 RGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVIT 385

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           +  LI G  ++ +  +  + L  MK     P
Sbjct: 386 YSILIDGLCKVRRMKEAAKTLEDMKAHGYTP 416



 Score =  170 bits (431), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 93/235 (39%), Positives = 137/235 (58%), Gaps = 5/235 (2%)

Query: 12  CKPNTVTYNTIIDGLCKE-GFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           CK   VTYNT+ID LCK+ G V  A  LF +++G  + P +VTYNSLI G C A   +EA
Sbjct: 309 CKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEA 368

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            + +F+ M+    P+V+T+++++D LCK  +M EA++ L+ M      P   TY  L++G
Sbjct: 369 MQ-YFDEMEGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLING 427

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC  G++  A   F  M+  GC  + V +N LI+G CK +   + L L   M ++G KP 
Sbjct: 428 FCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPD 487

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           V+TYN L  GL   ++VE A +LF+ M     A + +T+N  I GLC    + EA
Sbjct: 488 VITYNCLISGLCSANRVEDAQRLFDGMA---CAPNVTTFNFLIRGLCAQKKVEEA 539



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 167/320 (52%), Gaps = 9/320 (2%)

Query: 55  NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
           N+L+ GL  A   ++A RLF E++     P+  T+NV++   CK G+M +A  +   M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
             + PNA T +TL+ G C  G+++ A +LF  M++        S+NIL+ G+     V +
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLF----EIHQVEHALKLFEEMQRDDVAADTSTYN 230
           AL+  ++M          TYN +  GL       +++E A++ F+EM+   V  D  +Y+
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
             +  L  +G + EA  LF     + C  DI  YN L+DG CK G+   A  L + + + 
Sbjct: 181 ILLSALSDSGRMAEAHALFSA---MTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
               +V TY+I+I+  C   ++++A ++F+ M E+   PN + F TLI GF +       
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 351 IELLHKMKEKKVMPDASIVS 370
           I+L  +M  +K+   A+IV+
Sbjct: 298 IKLFAEM--EKIGCKATIVT 315



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 104/207 (50%), Gaps = 4/207 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G    P  VTYN++I G C    + +A   F +M+G+   P+V+TY+ LI GLC      
Sbjct: 342 GAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMK 400

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA +   +M   G  P+VVT+  +++  CK G++  A    + M      PN   ++TL+
Sbjct: 401 EAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLI 460

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C   + N    L   M + GCK D ++YN LI+G C    VE+A  L+  M      
Sbjct: 461 DGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMA---CA 517

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFE 215
           P V T+N L  GL    +VE A  + +
Sbjct: 518 PNVTTFNFLIRGLCAQKKVEEARNILD 544


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 201/398 (50%), Gaps = 35/398 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N V+Y  +I G C+ G +D+A  LF QMK +   PDV TY  L+   C      EA 
Sbjct: 256 CLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEAL 315

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           + F EM++ G++P+V T+ V++D  CK GKMDE   +L  M+++ +  +   ++ L+DG+
Sbjct: 316 KFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGY 375

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A  +  SM+      +  +YN LI G+C+ K ++ A++L  +M    + P +
Sbjct: 376 CKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNL 435

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  GL +   V+ A +L   M +D    D  T+  FID LCK G + +A ++F +
Sbjct: 436 VTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFES 495

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L     E +   Y  LIDG CK+ +   A  LF+ +       + +T+N+++ GL  +G+
Sbjct: 496 LKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGK 555

Query: 312 MDKAHDL----------------------------------FLD-MEENAVAPNVIIFVT 336
           ++ A  L                                  FLD M  +   PNV+ +  
Sbjct: 556 VEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTA 615

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            I  + R  +  +  E++ K+KE+ ++ D+ I  ++V+
Sbjct: 616 FIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVN 653



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 168/327 (51%)

Query: 50  DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
            V +YN L   L      +E   LF +M++ GV+P++++FN +++  CK G +  A    
Sbjct: 154 SVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYF 213

Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
             +++     ++FTY++L+ G+C   ++  A ++F  M   GC  ++VSY  LI+G+C+ 
Sbjct: 214 CGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEV 273

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
            +++EAL L+ +M   G  P V TY  L     E+ +   ALK FEEM  + +  +  TY
Sbjct: 274 GKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTY 333

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
              ID  CK G + E +E+  T+        +  +N LIDG CK G +E A+ +  S+  
Sbjct: 334 TVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKL 393

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
             +  +  TYN +I G C    MD+A  L   M EN ++PN++ + TLIHG  +      
Sbjct: 394 NKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDS 453

Query: 350 VIELLHKMKEKKVMPDASIVSMVVDLL 376
              L H M +   +PD       +D L
Sbjct: 454 AWRLHHLMIKDGFVPDQRTFCAFIDCL 480



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 180/360 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +  +YN +   L + G +D+   LF  M  + + P+++++N++++  C   +   AK  F
Sbjct: 154 SVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYF 213

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             +M  G      T+  ++   CK  ++ +A ++ ++M Q     N  +Y+ L+ GFC  
Sbjct: 214 CGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEV 273

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GKI+ A ELF  M+  GC  D  +Y +L+  +C+  +  EAL  + EMV  GI+P V TY
Sbjct: 274 GKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTY 333

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L     ++ +++  +++   M    + +    +N  IDG CK G + +A+ +  ++ +
Sbjct: 334 TVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKL 393

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
            K   + + YN LI G C+   ++ A+ L   +    L  ++VTYN +IHGLC    +D 
Sbjct: 394 NKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDS 453

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  L   M ++   P+   F   I    ++ K  +  ++   +KEK    +  + + ++D
Sbjct: 454 AWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALID 513



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 184/387 (47%), Gaps = 33/387 (8%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC PN+ TYN +I G C++  +D+A AL  +M    ++P++VTYN+LIHGLC A   + A
Sbjct: 396 VC-PNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSA 454

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            RL   M+  G  P   TF   +D LCK GK+++A ++ + + ++    N F Y+ L+DG
Sbjct: 455 WRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDG 514

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +C   K + A  LF  M   GC  + +++N+L++G  K  +VE+A+SL   M     KPT
Sbjct: 515 YCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPT 574

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL-- 248
           V TY  L   +      + A    ++M       +  TY  FI   C+ G ++EA E+  
Sbjct: 575 VHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVV 634

Query: 249 -FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL- 306
             +  GIL   LD   Y+ L++     G+L+ A  +   +          TY+I++  L 
Sbjct: 635 KIKEEGIL---LDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLI 691

Query: 307 -------------------CNDGQMDKAHD------LFLDMEENAVAPNVIIFVTLIHGF 341
                               ++  + K  D      LF  M E    PNV  +  LI G 
Sbjct: 692 FEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGL 751

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASI 368
            ++   S    L + MKE  + P  +I
Sbjct: 752 CKVEHLSLAFRLFNHMKESGISPSENI 778



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 184/362 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +++NT+++  CK G V  AKA F  +       D  TY SLI G C  ++  +A +
Sbjct: 187 EPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYK 246

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  M  +G   + V++  ++   C+ GK+DEA  L   M +    P+  TY+ L+  FC
Sbjct: 247 VFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFC 306

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK   A + F  M   G + +  +Y +LI+ +CK  +++E + +   M+ KG+  +VV
Sbjct: 307 EVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVV 366

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            +N L  G  +   +E A+ + + M+ + V  ++ TYN  I G C+   +  A+ L   +
Sbjct: 367 PFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKM 426

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K   ++  YN LI GLCK+  ++ A  L   + +   V D  T+   I  LC  G++
Sbjct: 427 YENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKV 486

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++AH +F  ++E     N  ++  LI G+ +  K S    L  +M  +   P++   +++
Sbjct: 487 EQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVL 546

Query: 373 VD 374
           +D
Sbjct: 547 LD 548



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 164/348 (47%), Gaps = 13/348 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+   ID LCK G V++A  +F  +K ++   +   Y +LI G C A  +++A  L
Sbjct: 468 PDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLL 527

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+ +G  P+ +TFNV++D L K GK+++A  L+D+M + D +P   TY+ L++    
Sbjct: 528 FKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILR 587

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
               +RA      M S GC+ + V+Y   I  YC+   + EA  +  ++  +GI      
Sbjct: 588 ESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFI 647

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L      I Q++ A  +   M          TY+  +  L    Y  E +       
Sbjct: 648 YDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGM------- 700

Query: 254 ILKCELDIQAYNCLID--GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                LD+ + N  +D   + K    EI   LF  +  +  V +V TY+ +I GLC    
Sbjct: 701 ----GLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEH 756

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           +  A  LF  M+E+ ++P+  I  +L+    ++    + + LL  M E
Sbjct: 757 LSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMME 804



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 161/341 (47%), Gaps = 26/341 (7%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN++T+N ++DGL KEG V+ A +L   M   +  P V TY  LI  +   +D++ A 
Sbjct: 536 CFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRAN 595

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
               +M+  G QP+VVT+   +   C+ G++ EA  ++  + +  +  ++F Y  L++ +
Sbjct: 596 MFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAY 655

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS-------------- 177
              G+++ A  +   M   GC+    +Y+IL+      K  +E +               
Sbjct: 656 GCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNAN 715

Query: 178 ------------LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
                       L+ +MV +G  P V TY+ L  GL ++  +  A +LF  M+   ++  
Sbjct: 716 IWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPS 775

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
            + +N+ +   CK G   EA+ L  ++        +++Y  L+ GL + G  E A E+FR
Sbjct: 776 ENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFR 835

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           SL       D V + +++ GL   G +D+   L   ME+  
Sbjct: 836 SLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTG 876



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 134/297 (45%), Gaps = 35/297 (11%)

Query: 104 EASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILI 163
           EA  +L+L+   +   +  +Y+ L       G I+    LF  M + G + + +S+N ++
Sbjct: 138 EARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMV 197

Query: 164 N-----------------------------------GYCKNKEVEEALSLYREMVSKGIK 188
           N                                   GYCK  E+ +A  ++  M  +G  
Sbjct: 198 NAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCL 257

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
              V+Y  L  G  E+ +++ AL+LF +M+ D    D  TY   +   C+ G   EA++ 
Sbjct: 258 RNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKF 317

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +     E ++  Y  LID  CK G+++  +E+  ++  + LV+ VV +N +I G C 
Sbjct: 318 FEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCK 377

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            G M+ A  +   M+ N V PN   +  LI GF R     + + LL+KM E K+ P+
Sbjct: 378 RGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPN 434



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 119/278 (42%), Gaps = 26/278 (9%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           I   C+PN VTY   I   C++G + +A+ + +++K E I  D   Y+ L++        
Sbjct: 602 ISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQL 661

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDEL---------------CKNGKMDEA------- 105
           + A  +   M D G +PS  T+++++  L                 N  +D A       
Sbjct: 662 DSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIAD 721

Query: 106 ----SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
               + L + MV++   PN  TYS L+ G C    ++ A  LF  M+  G    +  +N 
Sbjct: 722 FEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNS 781

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L++  CK    EEAL L   M+       + +Y  L  GLFE    E A ++F  +    
Sbjct: 782 LLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCG 841

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
              D   +   +DGL + GY+ E  +L   +    C L
Sbjct: 842 YNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRL 879



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 3/179 (1%)

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N++       H+    L L   +   + +   ++YN     L + G I E   LF+ +  
Sbjct: 127 NSMIKSCVSSHEARFVLNL---LTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLN 183

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              E ++ ++N +++  CK G + +A   F  L +     D  TY  +I G C   ++  
Sbjct: 184 DGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGD 243

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A+ +F  M +     N + +  LIHGF  + K  + +EL  +MKE    PD    +++V
Sbjct: 244 AYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLV 302


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 173/307 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+ VTYN +I G CK G +D+A     ++      PDV+++N ++  LC    W +A 
Sbjct: 247 CKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAM 306

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M+ +G  PSVVTFN++++ LC+ G + +A  +L++M +    PN+ +++ L+ GF
Sbjct: 307 KLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGF 366

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    I+RA E    M S GC  D V+YNIL+   CK+ +V++A+ +  ++ SKG  P++
Sbjct: 367 CNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSL 426

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++YNT+  GL ++ + E A++L EEM    +  D  T  + + GL + G + EA++ F  
Sbjct: 427 ISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHY 486

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L       +   YN +I GLCKS +  +A++    +  +       TY  +I G+  +G 
Sbjct: 487 LKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGL 546

Query: 312 MDKAHDL 318
            + A  L
Sbjct: 547 AEDASKL 553



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 165/331 (49%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT   +ID  CKE  V +A  LF +M+ +   PDVVTYN LI G C     +EA 
Sbjct: 212 CYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAI 271

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R   ++   G QP V++ N+I+  LC  G+  +A +LL  M+++   P+  T++ L++  
Sbjct: 272 RFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFL 331

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + +A  +   M   G   +  S+N LI G+C  K ++ A+     MVS+G  P +
Sbjct: 332 CQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDI 391

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN L   L +  +V+ A+ +  ++     +    +YNT IDGL K G    AVEL   
Sbjct: 392 VTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEE 451

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D+     ++ GL + G++  A++ F  L R  +  +   YN +I GLC   Q
Sbjct: 452 MCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQ 511

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
              A D   DM      P    + TLI G  
Sbjct: 512 TSLAIDFLADMVAKGCKPTEATYTTLIKGIT 542



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 183/360 (50%), Gaps = 3/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +    +I   CK G    A  +   ++      DV +YN LI G C + +  EA R+
Sbjct: 112 PDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRV 171

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   GV P+  T++ ++  LC  GK+ +A ++L   +Q    P+  T + L+D  C 
Sbjct: 172 LDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCK 228

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              + +A +LF  M + GCK D V+YN+LI G+CK   ++EA+   +++ S G +P V++
Sbjct: 229 ESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVIS 288

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N +   L    +   A+KL   M R        T+N  I+ LC+ G + +A+ +   + 
Sbjct: 289 HNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMP 348

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 + +++N LI G C    ++ A+E    +  R    D+VTYNI++  LC DG++D
Sbjct: 349 KHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVD 408

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  +   +     +P++I + T+I G +++ K    +ELL +M  K + PD    + VV
Sbjct: 409 DAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVV 468



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 182/360 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY+ ++  LC  G + +A  +  +       PDVVT   LI   C  +   +A +L
Sbjct: 179 PNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKL 238

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM ++G +P VVT+NV++   CK G++DEA R L  +     +P+  +++ ++   C 
Sbjct: 239 FNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCS 298

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A +L  +M   GC    V++NILIN  C+   + +AL++   M   G  P   +
Sbjct: 299 GGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRS 358

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L  G      ++ A++  E M       D  TYN  +  LCK+G + +AV +   L 
Sbjct: 359 FNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLS 418

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C   + +YN +IDGL K G+ E+A+EL   +  + L  D++T   ++ GL  +G++ 
Sbjct: 419 SKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVR 478

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A   F  ++  A+ PN  I+ ++I G  +  + S  I+ L  M  K   P  +  + ++
Sbjct: 479 EAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLI 538



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 181/359 (50%), Gaps = 3/359 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +  +YN +I G CK G +++A  +  +M    ++P+  TY++++  LC      +A ++ 
Sbjct: 148 DVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVL 204

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
              +     P VVT  V++D  CK   + +A +L + M  +  +P+  TY+ L+ GFC  
Sbjct: 205 GRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKG 264

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+++ A      + S GC+ D +S+N+++   C      +A+ L   M+ KG  P+VVT+
Sbjct: 265 GRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTF 324

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L   L +   +  AL + E M +     ++ ++N  I G C    I  A+E    +  
Sbjct: 325 NILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVS 384

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C  DI  YN L+  LCK G+++ A+ +   L  +     +++YN +I GL   G+ + 
Sbjct: 385 RGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAEL 444

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A +L  +M    + P++I   +++ G  R  K  + ++  H +K   + P+A I + ++
Sbjct: 445 AVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSII 503



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 143/308 (46%), Gaps = 38/308 (12%)

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           +  L +NG+++E SR L+ M  +   P+    + L+  FC  G+   A ++ G +E  G 
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ------ 206
             D  SYN+LI+GYCK+ E+EEAL +   M   G+ P   TY+ +   L +  +      
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQ 202

Query: 207 -----------------------------VEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
                                        V  A+KLF EM+      D  TYN  I G C
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFC 262

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           K G + EA+   + L    C+ D+ ++N ++  LC  GR   A++L  ++ R+  +  VV
Sbjct: 263 KGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVV 322

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           T+NI+I+ LC  G + KA ++   M ++   PN   F  LI GF       + IE L  M
Sbjct: 323 TFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIM 382

Query: 358 KEKKVMPD 365
             +   PD
Sbjct: 383 VSRGCYPD 390


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 188/354 (53%), Gaps = 1/354 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYN +++  CK     +A  L   M+ E   P+ VTYN L+ G+C   D ++A 
Sbjct: 38  CAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDAL 97

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   +   G +PS V +N ++  LC   +  +A  L+  M++ +  PN  T++ ++   
Sbjct: 98  ELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSL 157

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + +A +L   M   GC  + V+YN +ING C+ + V+ A+ L  +M S G KP +
Sbjct: 158 CRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDI 217

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  GL    +   A +L + M ++    D  T+NT I  LC+ G +V+A+E+F+ 
Sbjct: 218 VTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQ 277

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  +   Y+ +I GL K+ +L+ ALELF  +  +    D + Y ++   L +D  
Sbjct: 278 MPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDT 336

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +++A      ++++ ++P+ +++  ++ G  R  K    I+++  M     MPD
Sbjct: 337 IEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPD 390



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 106/319 (33%), Positives = 165/319 (51%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           + P+  TYN LIH LC      +A  +  +M+ +G  P VVT+N++++  CK     +A 
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
            L+DLM      PN  TY+ LMDG C  G ++ A EL  ++ S GCK   V+YN ++ G 
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           C  +   +A  L  EM+ +   P   T+N +   L     ++ A++L E+M +    A+ 
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            TYN  I+GLC+   +  A+ L   +    C+ DI  YN L+ GLC + R   A EL  +
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           + +   + D VT+N +I  LC  G M  A ++F  M +    PN I + T+I G  +  K
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 302

Query: 347 PSKVIELLHKMKEKKVMPD 365
             + +EL ++M  K   PD
Sbjct: 303 LDQALELFNEMGHKGFNPD 321



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 177/356 (49%), Gaps = 34/356 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYN ++DG+C EG VD A  L   +      P  V YN+++ GLC A  W +A 
Sbjct: 73  CTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDAD 132

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+ +   P+  TFNV++  LC+ G + +A +LL+ M +     N  TY+ +++G 
Sbjct: 133 ELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGL 192

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    ++ A  L   M+S GCK D V+YN L+ G C      +A  L   M   G  P  
Sbjct: 193 CEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDN 252

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NTL   L +   +  A+++F++M       ++ TY+T I GL K   + +A+ELF  
Sbjct: 253 VTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNE 312

Query: 252 LG------------ILKC-------ELDIQA---------------YNCLIDGLCKSGRL 277
           +G            + +C       E  IQ                YN ++ GLC++G+ 
Sbjct: 313 MGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKT 372

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           E A+++   +     + D +TY I+I GL  +G +++A +L + +    V  N +I
Sbjct: 373 EFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSLI 428



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 158/292 (54%)

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
           VQP+  T+N ++  LC+ G++ +A  +LD M+ R   P+  TY+ L++  C      +A 
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
           EL   M + GC  ++V+YN+L++G C   +V++AL L R + S G KP+ V YNT+  GL
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
               +   A +L  EM R++   + +T+N  I  LC+ G + +A++L   +    C  +I
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
             YN +I+GLC+   ++ A+ L   +       D+VTYN ++ GLC+  +   A +L  +
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           M +N   P+ + F TLI    +       IE+  +M +K   P++   S ++
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTII 294



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/266 (36%), Positives = 134/266 (50%), Gaps = 10/266 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N VTYN II+GLC++  VD A  L  +MK     PD+VTYN+L+ GLC A  W +A+
Sbjct: 178 CTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAE 237

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M   G  P  VTFN ++  LC+ G M +A  +   M  +   PN+ TYST++ G 
Sbjct: 238 ELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGL 297

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               K+++A ELF  M   G   D + Y +L      +  +EEA+   R++   GI P  
Sbjct: 298 AKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHT 356

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YN + LGL    + E A+ +   M       D  TY   I+GL   GY+ EA EL   
Sbjct: 357 VLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIK 416

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRL 277
           L    C  D+     L++ L KS  L
Sbjct: 417 L----CSRDV-----LVNSLIKSEAL 433



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 126/260 (48%)

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           V+PNA+TY+ L+   C  G++  A  +   M   GC  D V+YNIL+   CK +   +A+
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            L   M ++G  P  VTYN L  G+     V+ AL+L   +        T  YNT + GL
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           C      +A EL   +    C  +   +N +I  LC+ G L+ A++L   + +    A++
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           VTYN +I+GLC    +D A  L   M+     P+++ + TL+ G     +     EL+  
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 357 MKEKKVMPDASIVSMVVDLL 376
           M +   +PD    + ++  L
Sbjct: 243 MTQNGCLPDNVTFNTLIGFL 262


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 188/365 (51%), Gaps = 1/365 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN-PDVVTYNSLIHGLCHANDWNEAK 71
           +P+  TYN +  GLC+ G VD+A  L  +M+  +   PDVVTYN+L+         ++A 
Sbjct: 310 EPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDAL 369

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL  EM D+GV+P++VT N+++  LCK GK++EA   L+ + +  + P+  TY+TL+D +
Sbjct: 370 RLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAY 429

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + +A  L   M   G K D  + N ++   CK K  E+A  L      +G  P  
Sbjct: 430 CKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDE 489

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+Y T+    F+ +  E AL+L+++M    +    STYNT I GLC+   + EA++    
Sbjct: 490 VSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNE 549

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L       D   YN +I   CK G LE A      +       DVVT N +++GLC  G+
Sbjct: 550 LVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGK 609

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +DKA  LF    E     +VI + TLI    ++      +     M+ K + PDA   ++
Sbjct: 610 LDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNV 669

Query: 372 VVDLL 376
           V+  L
Sbjct: 670 VLSAL 674



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 189/361 (52%), Gaps = 1/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T+N ++   C +G +  A A    M+G  ++PD VTYN+L++  C      EA+ L
Sbjct: 206 PNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 265

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   G+ P+  T+N ++    + G + +A+++++ M      P+  TY+ L  G C 
Sbjct: 266 LARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQ 325

Query: 134 TGKINRAEELFGSMESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            GK++ A  L   ME +     DV +YN L++   K +   +AL L  EM  KG+KPT+V
Sbjct: 326 AGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLV 385

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N +   L +  ++E AL   E++  + +A D  TYNT ID  CK G + +A  L   +
Sbjct: 386 THNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                ++D    N ++  LCK  R E A EL  S P+R  V D V+Y  ++     +   
Sbjct: 446 VGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNP 505

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A  L+  M E  + P++  + TLI G  R+ +  + I+ L+++ EK ++PD +  +++
Sbjct: 506 EPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNII 565

Query: 373 V 373
           +
Sbjct: 566 I 566



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 177/346 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT++D   K      A  L  +M+ + + P +VT+N ++  LC      EA   
Sbjct: 347 PDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGK 406

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++ ++G+ P V+T+N ++D  CK G + +A  L+D MV + ++ + FT +T++   C 
Sbjct: 407 LEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCK 466

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +   AEEL  S    G   D+VSY  ++  Y K    E AL L+ +M+ + + P++ T
Sbjct: 467 MKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIST 526

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL  + +++ A+    E+    +  D +TYN  I   CK G +  A      + 
Sbjct: 527 YNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMV 586

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+   N L++GLC  G+L+ AL+LF S   +    DV+TYN +I  +C  G +D
Sbjct: 587 ENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVD 646

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
            A   F DME   + P+   +  ++       +  +   +LHK+ +
Sbjct: 647 TALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 160/307 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VT+N ++  LCKEG +++A     ++  E + PDV+TYN+LI   C A +  +A  
Sbjct: 381 KPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFT 440

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+ +G++    T N ++  LCK  + ++A  LL    QR   P+  +Y T+M  + 
Sbjct: 441 LMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYF 500

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                  A  L+  M          +YN LI G C+ + ++EA+    E+V KG+ P   
Sbjct: 501 KEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDET 560

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN +     +   +E+A +   +M  +    D  T NT ++GLC +G + +A++LF + 
Sbjct: 561 TYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESW 620

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                ++D+  YN LI  +CK G ++ AL  F  +  + L  D  TYN+++  L   G+ 
Sbjct: 621 VEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRS 680

Query: 313 DKAHDLF 319
           ++AH++ 
Sbjct: 681 EEAHNML 687



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 170/376 (45%), Gaps = 50/376 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TYNT+ID  CK G V KA  L  +M G+ +  D  T N++++ LC    + +A+ L
Sbjct: 417 PDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEEL 476

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
                 +G  P  V++  +M    K    + A RL D M++R + P+  TY+TL+ G C 
Sbjct: 477 LHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCR 536

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCK-----------NKEVE--------- 173
             ++  A +    +   G   D+ +YNI+I+ YCK           NK VE         
Sbjct: 537 MERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVT 596

Query: 174 ---------------EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
                          +AL L+   V KG K  V+TYNTL   + ++  V+ AL  F++M+
Sbjct: 597 CNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDME 656

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCKSG 275
              +  D  TYN  +  L + G   EA  +   L   G L      Q++ C +  L  S 
Sbjct: 657 VKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLS-----QSFACPL--LKPSS 709

Query: 276 RLEIALELFRSLP-----RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
             E  ++     P      +     + TY   ++GLC  GQ+ +A  +  +M +  +  +
Sbjct: 710 ADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVD 769

Query: 331 VIIFVTLIHGFVRINK 346
              ++TL+ G ++  K
Sbjct: 770 SSTYITLMEGLIKRQK 785



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 156/334 (46%), Gaps = 3/334 (0%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL--FFEMMDQGVQPSVVTFNVI 92
           A+ L    +   + P +   N+++  L  +        L  F  +++  + P+  TFN++
Sbjct: 155 AQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLL 214

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           +   C  G + +A   L  M    + P+A TY+TL++  C  G +  A  L   M+  G 
Sbjct: 215 VHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGI 274

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
                +YN L++ + +   +++A  +   M + G +P + TYN L +GL +  +V+ A +
Sbjct: 275 APTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFR 334

Query: 213 LFEEMQRDDVA-ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           L +EM+R   A  D  TYNT +D   K     +A+ L   +     +  +  +N ++  L
Sbjct: 335 LKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSL 394

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           CK G+LE AL     +    L  DV+TYN +I   C  G + KA  L  +M    +  + 
Sbjct: 395 CKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDT 454

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
               T+++   ++ +     ELLH   ++  +PD
Sbjct: 455 FTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 1/160 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + +TYNT+I  +CK G VD A   F  M+ + + PD  TYN ++  L  A    EA  
Sbjct: 626 KVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHN 685

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF-TYSTLMDGF 131
           +  ++ D G         ++         + E     +       + NA  TY   ++G 
Sbjct: 686 MLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGL 745

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           C  G++  A+ +   M   G   D  +Y  L+ G  K ++
Sbjct: 746 CTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQK 785


>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/378 (33%), Positives = 190/378 (50%), Gaps = 36/378 (9%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TYNT++ GLC EG +D+A  +  +M+   + PDVVTYN+LI G        E  RL  EM
Sbjct: 139 TYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEM 198

Query: 78  MDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
             + GV+P+ VT N+++    K GK++EAS  +  MV+  V P+ FTY+T+++GFC  GK
Sbjct: 199 KSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGK 258

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +  A  +   M   G K D  + N +++  C  K+ EEA  L  +   +G     VTY T
Sbjct: 259 LGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGT 318

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---G 253
           L +G F+  Q + ALKL+EEM++  +     +YN  I GLC +G   +AV+    L   G
Sbjct: 319 LIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKG 378

Query: 254 I----LKCELDIQAY----------------------------NCLIDGLCKSGRLEIAL 281
           +    + C + I  Y                            N L+ GLC+   LE A 
Sbjct: 379 LVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAF 438

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           +LF S   +    DVVTYN MI  LC +G++D+A DL  DME     P+   +  ++   
Sbjct: 439 KLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRAL 498

Query: 342 VRINKPSKVIELLHKMKE 359
               +  +  + + K+ E
Sbjct: 499 THAGRTEEAEKFMSKLSE 516



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 180/381 (47%), Gaps = 47/381 (12%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VT+N ++    KEG +++A    ++M    ++PD  TYN++I+G C A    EA R
Sbjct: 205 EPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFR 264

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELC----------------------------------- 97
           +  EM  +G++P + T N ++  LC                                   
Sbjct: 265 MMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYF 324

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K  + D+A +L + M +R + P+  +Y+ L+ G CL+GK ++A +    +   G   D+V
Sbjct: 325 KGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEV 384

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           S NI+I+GYC    V++A   + +MV    KP + T N L  GL  +  +E A KLF   
Sbjct: 385 SCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSW 444

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
                + D  TYNT I  LCK G + EA +L   + + K E D   YN ++  L  +GR 
Sbjct: 445 ISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRT 504

Query: 278 EIALELFRSLP------------RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
           E A +    L             + +  +  + Y+  I  LC  G+  +A  LF + E+ 
Sbjct: 505 EEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESEQK 564

Query: 326 AVAPNVIIFVTLIHGFVRINK 346
            V+ N   ++ L+ GF++  K
Sbjct: 565 GVSLNKYTYIKLMDGFLKRRK 585



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 123/280 (43%), Gaps = 47/280 (16%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + VTY T+I G  K    DKA  L+ +MK   I P VV+YN LI GLC +   ++A    
Sbjct: 312 DEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKL 371

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            E++++G+ P  V+ N+I+   C  G +D+A +  + MV    +P+ FT + L+ G C  
Sbjct: 372 NELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRV 431

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
             + +A +LF S  S     D V+YN +I+  CK   ++EA  L  +M  K  +P   TY
Sbjct: 432 DMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTY 491

Query: 195 NTLFLGLFEIHQVEHA-------------------------------------------- 210
           N +   L    + E A                                            
Sbjct: 492 NAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQGKY 551

Query: 211 ---LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
              +KLF+E ++  V+ +  TY   +DG  K    +  V+
Sbjct: 552 KEAMKLFQESEQKGVSLNKYTYIKLMDGFLKRRKSISKVD 591



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 27/210 (12%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N  +G   KP+  T N ++ GLC+   ++KA  LF     +  + DVVTYN++I  LC  
Sbjct: 407 NKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKE 466

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
              +EA  L  +M  +  +P   T+N I+  L   G+ +EA + +  + +          
Sbjct: 467 GRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSE---------- 516

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
                    TG+  +  +    +++      D+ Y+  I+  C   + +EA+ L++E   
Sbjct: 517 ---------TGQAVKTHDTSQELDA----SSDIMYSQQISDLCTQGKYKEAMKLFQESEQ 563

Query: 185 KGIKPTVVTYNTLFLGLFE----IHQVEHA 210
           KG+     TY  L  G  +    I +V+HA
Sbjct: 564 KGVSLNKYTYIKLMDGFLKRRKSISKVDHA 593



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 36/143 (25%)

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN------------------ 300
           +D+  YN L+ GLC  G+++ A+ +   +    L+ DVVTYN                  
Sbjct: 135 IDVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRL 194

Query: 301 ------------------IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
                             IM+     +G++++A D  + M E+ V+P+   + T+I+GF 
Sbjct: 195 LEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFC 254

Query: 343 RINKPSKVIELLHKMKEKKVMPD 365
           +  K  +   ++ +M  K + PD
Sbjct: 255 KAGKLGEAFRMMDEMARKGLKPD 277


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 185/354 (52%), Gaps = 9/354 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VT+ T I   C+ G +D+A  L  QM      PDV+ Y++L++G       +EA 
Sbjct: 247 CHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEAL 306

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M+    +P+ V +N  +  LC  G+ +E   L+  MV++D  PN  T+STL++  
Sbjct: 307 KLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSL 363

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    +  A E+   M+  G   D VSYN +I+ +      ++AL L + M+    KP  
Sbjct: 364 CQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDT 420

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +++N +   L +  +   A++L  +M + D   +  T+N  ID LC+NG + +A+E+F  
Sbjct: 421 ISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFEL 480

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +C  DI  Y+ LI+G  + G  E+A +LFRS+P R   AD+ +YN  + GLC   +
Sbjct: 481 MPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCR---ADIFSYNATLKGLCMAAR 537

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            D A +L  DM      PN + F  LI    +    ++ I++  +M +  + PD
Sbjct: 538 WDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPD 591



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 166/332 (50%), Gaps = 9/332 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T++T+I+ LC+   V+ A  +  QM+     PDVV+YN++I         ++A 
Sbjct: 349 CPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDAL 408

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M+    +P  ++FN ++  LCK  +  +A  L+  M+++D R N  T++ L+D  
Sbjct: 409 KLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSL 465

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++  A E+F  M    C  D V+Y+ LING+ +    E A  L+R M  +     +
Sbjct: 466 CQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRA---DI 522

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +YN    GL    + + A +L  +M  +D   +  T+N  I  LC+ G +  A++++  
Sbjct: 523 FSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQ 582

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       DI  YN LI+G  + GRL+ AL+   ++P      D ++YN ++ GLC   +
Sbjct: 583 MPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMP---CEPDTISYNSILKGLCRAER 639

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
              A  L  +M      PN + F      F++
Sbjct: 640 WKDAEKLVTEMLRKNCTPNEVTFKYANQLFIK 671



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 175/356 (49%), Gaps = 9/356 (2%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           ++C+PNTV YN  + GLC  G  ++   L  +M  ++  P+  T+++LI+ LC       
Sbjct: 312 MLCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEY 371

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +  +M   G  P VV++N I+       + D+A +LL  M+    +P+  +++ ++ 
Sbjct: 372 AVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLK 428

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             C   +   A EL   M    C+ +++++NILI+  C+N +V++A+ ++  M      P
Sbjct: 429 CLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMP 488

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            +VTY++L  G  E    E A  LF  M      AD  +YN  + GLC      +A EL 
Sbjct: 489 DIVTYSSLINGFSEQGLDEMAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELI 545

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +    C  +   +N LI  LC+ G +  A++++  +P+  +  D+ TYN +I+G    
Sbjct: 546 ADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQ 605

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           G++D A      M      P+ I + +++ G  R  +     +L+ +M  K   P+
Sbjct: 606 GRLDDALKFLSTM---PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPN 658



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 175/363 (48%), Gaps = 11/363 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  ++ N +I  LC    +  A+ +   +K      D V++N+L+ G C      +A+R+
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASGAA-DAVSHNTLVAGYCRDGSLGDAERV 172

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
                  G   +VVT+  ++D  C++G++ +A RL+  M    V P+ +TY+T++ G C 
Sbjct: 173 VEAARASGTA-NVVTYTALIDGYCRSGRLADALRLIASM---PVAPDTYTYNTVLKGLCC 228

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +  +AEEL   M    C  ++V++   I  +C+N  ++ A+ L  +M   G  P V+ 
Sbjct: 229 AKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVII 288

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+TL  G  E  +V+ ALKL   M       +T  YN  + GLC  G   E  EL   + 
Sbjct: 289 YSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMV 345

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  +   ++ LI+ LC++  +E A+E+   + +   + DVV+YN +I    +  + D
Sbjct: 346 RKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARAD 405

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L   M      P+ I F  ++    +  +    +EL+ KM +K    +    ++++
Sbjct: 406 DALKLLKSM---LCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILI 462

Query: 374 DLL 376
           D L
Sbjct: 463 DSL 465


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 182/333 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T+N +++ LCKEG V  A+ +F +++   + P  V++N+LI+G C + +  E  RL
Sbjct: 230 PNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRL 289

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M +  V P V T++ ++D LCK  ++++A+ L   M  R + PN  T++TL++G C 
Sbjct: 290 KMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCK 349

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A E++  M + G K D V YN LI+G CK     EA     EM  +G+ P   T
Sbjct: 350 NGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFT 409

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G  +   +E AL++ +EM ++ +  D   +   I GLC++G IV+A    R + 
Sbjct: 410 YTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREML 469

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D   Y  ++DG CK G +++  +L + +     +  V+TYN++++GLC  GQ+ 
Sbjct: 470 RAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVK 529

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
            A  L   M    V P+ I +  L+ G  +  K
Sbjct: 530 NADMLLNAMLNLGVVPDDITYNILLQGHCKHGK 562



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 176/331 (53%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
           A   +L++      P+V T+N L++ LC      +A+ +F E+   G+QP+ V+FN +++
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLIN 275

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
             CK+G ++E  RL  +M +  V P+ FTYS L+DG C   ++  A  LF  M   G   
Sbjct: 276 GYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVP 335

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           +DV++  LING CKN  V+ AL +Y++M +KG+K  +V YNTL  GL +      A K  
Sbjct: 336 NDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFV 395

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
            EM +  +  D  TY T +DG CK G +  A+E+ + +     +LD  A+  +I GLC+ 
Sbjct: 396 GEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRD 455

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G++  A    R + R  L  D  TY +++ G C  G +     L  +M+ +   P VI +
Sbjct: 456 GKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITY 515

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             L++G  +  +      LL+ M    V+PD
Sbjct: 516 NVLMNGLCKQGQVKNADMLLNAMLNLGVVPD 546



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 177/334 (52%), Gaps = 3/334 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  V++NT+I+G CK G +++   L + M+   + PDV TY++LI GLC      +A  
Sbjct: 264 QPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANH 323

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM D+G+ P+ VTF  +++  CKNG++D A  +   M  + ++ +   Y+TL+DG C
Sbjct: 324 LFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLC 383

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G    A +  G M   G   D  +Y  L++G CK  ++E AL + +EMV +GI+   V
Sbjct: 384 KGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNV 443

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            +  +  GL    ++  A +   EM R  +  D  TY   +DG CK G +    +L + +
Sbjct: 444 AFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEM 503

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   +  YN L++GLCK G+++ A  L  ++    +V D +TYNI++ G C  G++
Sbjct: 504 QSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKL 563

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
               ++  +M    +  +   + +L+H   + +K
Sbjct: 564 GDFQNVKTEM---GLVSDYASYRSLLHELSKASK 594



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 133/256 (51%)

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           PN +T++ LM+  C  GK+  A+ +F  +   G +   VS+N LINGYCK+  +EE   L
Sbjct: 230 PNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRL 289

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
              M    + P V TY+ L  GL +  Q+E A  LF+EM    +  +  T+ T I+G CK
Sbjct: 290 KMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCK 349

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           NG +  A+E+++ +     + D+  YN LIDGLCK G    A +    + +R L+ D  T
Sbjct: 350 NGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFT 409

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y  ++ G C +G ++ A ++  +M +  +  + + F  +I G  R  K       L +M 
Sbjct: 410 YTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREML 469

Query: 359 EKKVMPDASIVSMVVD 374
              + PD    +MV+D
Sbjct: 470 RAGLKPDDGTYTMVMD 485



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 136/277 (49%)

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           + GK   +S    ++  +    ++F +  LM  +   G ++ A + F   +    K    
Sbjct: 139 RKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFN 198

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
               L+    K      AL  Y E++  G  P V T+N L   L +  +V+ A  +F+E+
Sbjct: 199 GCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEI 258

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
           ++  +     ++NT I+G CK+G + E   L   +   +   D+  Y+ LIDGLCK  +L
Sbjct: 259 RKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQL 318

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           E A  LF+ +  R LV + VT+  +I+G C +G++D A +++  M    +  +++++ TL
Sbjct: 319 EDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTL 378

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           I G  +     +  + + +M ++ ++PD    + ++D
Sbjct: 379 IDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLD 415


>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
 gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
          Length = 353

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 106/322 (32%), Positives = 174/322 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYN +++G+C+EG VD A      +      P+ V+YN ++ GLC A  W +A+
Sbjct: 23  CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 82

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM  +G  P+VVTFN+++  LC+ G ++ A  +L+ + +    PN+ +Y+ L+  F
Sbjct: 83  ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF 142

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K+++A      M S GC  D VSYN L+   C++ EV+ A+ L  ++  KG  P +
Sbjct: 143 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 202

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++YNT+  GL +  + + AL+L  EM    +  D  TY+T   GLC+   I +A+  F  
Sbjct: 203 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 262

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +    +   YN +I GLCK      A++LF  +     + +  TY I+I GL  +G 
Sbjct: 263 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 322

Query: 312 MDKAHDLFLDMEENAVAPNVII 333
           + +A DL  ++    V    +I
Sbjct: 323 IKEARDLLDELCSRGVVRKSLI 344



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 178/350 (50%)

Query: 27  CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           CK     +A  L  +M+ +   PD+VTYN +++G+C     ++A      +   G +P+ 
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
           V++N+++  LC   + ++A  L+  M Q+   PN  T++ L+   C  G +  A E+   
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           +   GC  + +SYN L++ +CK K++++A++    MVS+G  P +V+YNTL   L    +
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           V+ A++L  +++    A    +YNT IDGL K G   EA+EL   +     + DI  Y+ 
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           +  GLC+  R+E A+  F  +    +  + V YN +I GLC   +   A DLF  M  N 
Sbjct: 243 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 302

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             PN   +  LI G        +  +LL ++  + V+  + I    + LL
Sbjct: 303 CMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLINKGAIRLL 352


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 182/382 (47%), Gaps = 38/382 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P T  +N I+  L K        +LF Q +   I PD+ T + LI+  CH      A  +
Sbjct: 56  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 115

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  ++ +G  P  +T N ++  LC  G++ +     D +V +  + +  +Y TL++G C 
Sbjct: 116 FANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCK 175

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+      L   +E    K D V YN +IN  CKNK + +A  +Y EM+ KGI P VVT
Sbjct: 176 AGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 235

Query: 194 YNTLFLGL---------------------------FEI-----------HQVEHALKLFE 215
           Y TL  G                            F +             V+ A+ LFE
Sbjct: 236 YTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFE 295

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
           EM+  ++  D  TYN+ IDGLCKN ++  A+ L + +     + D+ +Y  L+DGLCK G
Sbjct: 296 EMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGG 355

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           RLEIA E F+ L  +    +V  YN+MI+GLC  G   +A DL   ME     PN I F 
Sbjct: 356 RLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFR 415

Query: 336 TLIHGFVRINKPSKVIELLHKM 357
           T+I      ++  K  ++L +M
Sbjct: 416 TIICALSEKDENDKAEKILREM 437



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 153/284 (53%), Gaps = 3/284 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + V+Y T+I+GLCK G       L  +++G ++ PDVV YN++I+ LC      +A  ++
Sbjct: 162 DQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY 221

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ +G+ P VVT+  ++   C  GKM EA  LL+ M  +++ P+ +T+S L+D     
Sbjct: 222 SEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKE 281

Query: 135 GK---INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           GK   ++ A  LF  M+      D V+YN LI+G CKN  +E A++L +EM   GI+P V
Sbjct: 282 GKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDV 341

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +Y  L  GL +  ++E A + F+ +       +   YN  I+GLCK G   EA++L   
Sbjct: 342 YSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSK 401

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           +    C  +   +  +I  L +    + A ++ R +  R L+ +
Sbjct: 402 MEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGLLKE 445



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 133/254 (52%), Gaps = 6/254 (2%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G   KP+ V YNTII+ LCK   +  A  ++ +M  + I+PDVVTY +LIHG C      
Sbjct: 191 GHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMK 250

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK---MDEASRLLDLMVQRDVRPNAFTYS 125
           EA  L  EM  + + P V TF+V++D L K GK   +DEA  L + M  +++ P+  TY+
Sbjct: 251 EAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYN 310

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           +L+DG C    + RA  L   M+  G + D  SY IL++G CK   +E A   ++ ++ K
Sbjct: 311 SLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVK 370

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G    V  YN +  GL +      A+ L  +M+      +  T+ T I  L +     +A
Sbjct: 371 GCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKA 430

Query: 246 VELFRTL---GILK 256
            ++ R +   G+LK
Sbjct: 431 EKILREMIARGLLK 444



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 159/331 (48%), Gaps = 5/331 (1%)

Query: 49  PDVVTYNSLIHGLCHANDW--NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           P +    + +H   H+     + A   F  M+     P    FN I+  L KN +     
Sbjct: 19  PPIAIPTATLHYQSHSQPHYHHHAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVI 78

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
            L        + P+  T S L++ FC    I  A  +F ++   G   D ++ N LI G 
Sbjct: 79  SLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGL 138

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           C   E+++ L  + ++V++G +   V+Y TL  GL +  + +   +L  +++   V  D 
Sbjct: 139 CFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDV 198

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
             YNT I+ LCKN  + +A +++  + +     D+  Y  LI G C  G+++ A  L   
Sbjct: 199 VMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNE 258

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQ---MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           +  + +  DV T++++I  L  +G+   +D+A  LF +M+   + P+++ + +LI G  +
Sbjct: 259 MKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCK 318

Query: 344 INKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +   + I LL +MKE  + PD    ++++D
Sbjct: 319 NHHLERAIALLKEMKEHGIQPDVYSYTILLD 349



 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 109/218 (50%)

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +N +++   KNK     +SL+++    GI P + T + L         +  A  +F  + 
Sbjct: 61  FNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 120

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
           +     D  T NT I GLC  G I + +     +     +LD  +Y  LI+GLCK+G  +
Sbjct: 121 KRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETK 180

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
               L R L    +  DVV YN +I+ LC +  +  A D++ +M    ++P+V+ + TLI
Sbjct: 181 AVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLI 240

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           HGF  + K  +   LL++MK K + PD    S+++D L
Sbjct: 241 HGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDAL 278


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 190/364 (52%), Gaps = 3/364 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VTYNT++ G    G ++ A+ +  +MK +   PD+ TYN ++  +C+    +E  R
Sbjct: 258 KPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLR 317

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              EM   G+ P  V++N+++     NG ++ A    D MV++ + P  +TY+TL+ G  
Sbjct: 318 ---EMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLF 374

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  KI  AE L   +   G   D V+YNI+INGYC++ + ++A +L+ EM++ GIKPT  
Sbjct: 375 MENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQF 434

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY +L   L   ++   A +LFE++    +  D    NT +DG C  G +  A  L + +
Sbjct: 435 TYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEM 494

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  + D   YNCL+ GLC  G+ E A EL   + RR +  D ++YN +I G    G  
Sbjct: 495 DRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDT 554

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A  +  +M      P ++ +  L+ G  +        ELL +MK + ++P+ S    V
Sbjct: 555 KHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSV 614

Query: 373 VDLL 376
           ++ +
Sbjct: 615 IEAM 618



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 187/396 (47%), Gaps = 67/396 (16%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +T+ ++ ++   C+   VD+A   F  MK +  +P   T N ++  L   N    A   +
Sbjct: 155 STILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFY 214

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M    ++ +V TFN++++ LCK GK+ +A   L +M    ++P   TY+TL+ G+ L 
Sbjct: 215 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLR 274

Query: 135 GKI--------------------------------NRAEELFGSMESMGCKHDDVSYNIL 162
           G+I                                 RA E+   M+ +G   D VSYNIL
Sbjct: 275 GRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLREMKGIGLVPDSVSYNIL 334

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           I G   N ++E A +   EMV +G+ PT  TYNTL  GLF  +++E A  L  E++   +
Sbjct: 335 IRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 394

Query: 223 AADTSTYNTFIDGLCKNG----------------------------YIV-------EAVE 247
             D+ TYN  I+G C++G                            Y++       EA E
Sbjct: 395 VLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADE 454

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           LF  +     + D+   N L+DG C +G ++ A  L + + R  +  D VTYN ++ GLC
Sbjct: 455 LFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLC 514

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            +G+ ++A +L  +M+   + P+ I + TLI G+ +
Sbjct: 515 GEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 550



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/233 (38%), Positives = 133/233 (57%), Gaps = 2/233 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E G+V   ++VTYN +I+G C+ G   KA AL  +M  + I P   TY SLI+ LC  N 
Sbjct: 391 EKGIVL--DSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNK 448

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             EA  LF +++ +G++P +V  N +MD  C  G MD A  LL  M + ++ P+  TY+ 
Sbjct: 449 TREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNC 508

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           LM G C  GK   A EL G M+  G K D +SYN LI+GY K  + + A  +  EM+S G
Sbjct: 509 LMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLG 568

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
             PT++TYN L  GL +    E A +L  EM+ + +  + S++ + I+ + K+
Sbjct: 569 FNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKS 621



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 154/299 (51%), Gaps = 2/299 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           IG+V  P++V+YN +I G    G ++ A A   +M  + + P   TYN+LIHGL   N  
Sbjct: 322 IGLV--PDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKI 379

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A+ L  E+ ++G+    VT+N++++  C++G   +A  L D M+   ++P  FTY++L
Sbjct: 380 EAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSL 439

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +   C   K   A+ELF  +   G K D V  N L++G+C    ++ A SL +EM    I
Sbjct: 440 IYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNI 499

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P  VTYN L  GL    + E A +L  EM+R  +  D  +YNT I G  K G    A  
Sbjct: 500 DPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFI 559

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +   +  L     +  YN L+ GL K+   E+A EL R +    +V +  ++  +I  +
Sbjct: 560 VRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAM 618


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 201/397 (50%), Gaps = 35/397 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+   YN +I+G CK   +D A  +  +M+ ++ +PD VTYN +I  LC     + A +
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +++    QP+V+T+ ++++     G +DEA +L+D M+ R ++P+ FTY+T++ G C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNIL------------------------------ 162
             G ++RA E+  ++E  G + D +SYNIL                              
Sbjct: 275 KEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334

Query: 163 -----INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
                I   C++ ++EEA++L + M  KG+ P   +Y+ L        +++ A++  E M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
             D    D   YNT +  LCKNG   +A+E+F  LG + C  +  +YN +   L  SG  
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             AL +   +    +  D +TYN MI  LC +G +D+A +L +DM      P+V+ +  +
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + GF + ++    I +L  M      P+ +  +++++
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 175/310 (56%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TYNTII G+CKEG VD+A  +   ++ +   PDV++YN L+  L +   W E ++
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEK 319

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M  +   P+VVT+++++  LC++GK++EA  LL LM ++ + P+A++Y  L+  FC
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ A E   +M S GC  D V+YN ++   CKN + ++AL ++ ++   G  P   
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNT+F  L+       AL +  EM  + +  D  TYN+ I  LC+ G + EA EL   +
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +    +  YN ++ G CK+ R+E A+ +  S+       +  TY ++I G+   G  
Sbjct: 500 RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYR 559

Query: 313 DKAHDLFLDM 322
            +A +L  D+
Sbjct: 560 AEAMELANDL 569



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 176/341 (51%), Gaps = 1/341 (0%)

Query: 27  CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           C+ G   ++  L   M  +  NPDV+    LI G     +  +A R+  E++++  QP V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
             +N +++  CK  ++D+A+R+LD M  +D  P+  TY+ ++   C  GK++ A ++   
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           + S  C+   ++Y ILI        V+EAL L  EM+S+G+KP + TYNT+  G+ +   
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           V+ A ++   ++      D  +YN  +  L   G   E  +L   +   KC+ ++  Y+ 
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LI  LC+ G++E A+ L + +  + L  D  +Y+ +I   C +G++D A +    M  + 
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             P+++ + T++    +  K  + +E+  K+ E    P++S
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 144/308 (46%), Gaps = 34/308 (11%)

Query: 92  IMDELCKNGKMDEASRLLDLMVQR----DV------------------------------ 117
           I    C++G   E+  LL+ MV++    DV                              
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
           +P+ F Y+ L++GFC   +I+ A  +   M S     D V+YNI+I   C   +++ AL 
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           +  +++S   +PTV+TY  L         V+ ALKL +EM    +  D  TYNT I G+C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           K G +  A E+ R L +   E D+ +YN L+  L   G+ E   +L   +       +VV
Sbjct: 275 KEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           TY+I+I  LC DG++++A +L   M+E  + P+   +  LI  F R  +    IE L  M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394

Query: 358 KEKKVMPD 365
                +PD
Sbjct: 395 ISDGCLPD 402



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 118/252 (46%), Gaps = 37/252 (14%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY+ +I  LC++G +++A  L   MK + + PD  +Y+ LI   C     + A 
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA-------------------------- 105
                M+  G  P +V +N ++  LCKNGK D+A                          
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448

Query: 106 ------SRLLDL---MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
                  R L +   M+   + P+  TY++++   C  G ++ A EL   M S       
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL-FEIHQVEHALKLFE 215
           V+YNI++ G+CK   +E+A+++   MV  G +P   TY  L  G+ F  ++ E A++L  
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE-AMELAN 567

Query: 216 EMQRDDVAADTS 227
           ++ R D  ++ S
Sbjct: 568 DLVRIDAISEYS 579



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 122/245 (49%), Gaps = 1/245 (0%)

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +G    +  L  +M   G   D +    LI G+   + + +A+ +  E++ K  +P V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             YN L  G  ++++++ A ++ + M+  D + DT TYN  I  LC  G +  A+++   
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L    C+  +  Y  LI+     G ++ AL+L   +  R L  D+ TYN +I G+C +G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A ++  ++E     P+VI +  L+   +   K  +  +L+ KM  +K  P+    S+
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 372 VVDLL 376
           ++  L
Sbjct: 339 LITTL 343



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 2/138 (1%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE+G  C PN+ +YNT+   L   G   +A  + L+M    I+PD +TYNS+I  LC   
Sbjct: 430 GEVG--CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             +EA  L  +M      PSVVT+N+++   CK  ++++A  +L+ MV    RPN  TY+
Sbjct: 488 MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547

Query: 126 TLMDGFCLTGKINRAEEL 143
            L++G    G    A EL
Sbjct: 548 VLIEGIGFAGYRAEAMEL 565


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 193/364 (53%), Gaps = 2/364 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ VTYN +I  LC  G +D A     Q+  EN  P VVTY  LI         +EA +
Sbjct: 158 SPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMK 217

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM++  +QP + T+N I+  +C+ G +D A +++  +  +   P+  TY+ L+ G  
Sbjct: 218 LLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLL 277

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK     EL   M + GC+ + V+Y++LI+  C++ +VEE + L ++M  KG+KP   
Sbjct: 278 NQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGY 337

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ L   L +  +V+ A+++ + M  D    D   YNT +  LCK     EA+ +F  L
Sbjct: 338 CYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKL 397

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           G + C  +  +YN +   L  +G    AL +   +  + +  D +TYN +I  LC DG +
Sbjct: 398 GEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMV 457

Query: 313 DKAHDLFLDME--ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           D+A +L +DME   +   P+V+ +  ++ G  ++++ S  IE+L  M +K   P+ +  +
Sbjct: 458 DEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYT 517

Query: 371 MVVD 374
            +++
Sbjct: 518 FLIE 521



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 175/308 (56%), Gaps = 2/308 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TYN+II G+C+EG+VD+A  +   +  +   PDV+TYN L+ GL +   W     
Sbjct: 228 QPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYE 287

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ +G + +VVT++V++  +C++GK++E   LL  M ++ ++P+ + Y  L+   C
Sbjct: 288 LMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALC 347

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ A E+   M S GC  D V+YN ++   CK K  +EALS++ ++   G  P   
Sbjct: 348 KEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNAS 407

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YN++F  L+       AL +  EM    V  D  TYN+ I  LC++G + EA+EL   +
Sbjct: 408 SYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDM 467

Query: 253 GI--LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +   +C+  + +YN ++ GLCK  R+  A+E+  ++  +    +  TY  +I G+   G
Sbjct: 468 EMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGG 527

Query: 311 QMDKAHDL 318
            ++ A DL
Sbjct: 528 CLNDARDL 535



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 178/354 (50%), Gaps = 1/354 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V    +I GL     +DKA  +   ++    +PD++ YN++I G C AN  + A +
Sbjct: 89  KPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDLIAYNAIITGFCRANRIDSAYQ 147

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M ++G  P +VT+N+++  LC  G +D A    + +++ + +P   TY+ L++   
Sbjct: 148 VLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATL 207

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G I+ A +L   M  +  + D  +YN +I G C+   V+ A  +   + SKG  P V+
Sbjct: 208 LQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVI 267

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L  GL    + E   +L  +M      A+  TY+  I  +C++G + E V L + +
Sbjct: 268 TYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDM 327

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D   Y+ LI  LCK GR+++A+E+   +     V D+V YN ++  LC   + 
Sbjct: 328 KKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRA 387

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           D+A  +F  + E   +PN   + ++           + + ++ +M +K V PD 
Sbjct: 388 DEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDG 441



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 126/243 (51%), Gaps = 2/243 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N VTY+ +I  +C++G V++   L   MK + + PD   Y+ LI  LC     + A 
Sbjct: 297 CEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAI 356

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   M+  G  P +V +N I+  LCK  + DEA  + + + +    PNA +Y+++    
Sbjct: 357 EVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSAL 416

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY--REMVSKGIKP 189
             TG   RA  +   M   G   D ++YN LI+  C++  V+EA+ L    EM S   KP
Sbjct: 417 WSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKP 476

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           +VV+YN + LGL ++ +V  A+++   M       + +TY   I+G+   G + +A +L 
Sbjct: 477 SVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLA 536

Query: 250 RTL 252
            TL
Sbjct: 537 TTL 539



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 96/179 (53%), Gaps = 12/179 (6%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE+G  C PN  +YN++   L   G   +A  + L+M  + ++PD +TYNSLI  LC   
Sbjct: 398 GEVG--CSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDG 455

Query: 66  DWNEAKRLF--FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
             +EA  L    EM     +PSVV++N+++  LCK  ++ +A  +L  MV +  RPN  T
Sbjct: 456 MVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETT 515

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           Y+ L++G    G +N A +L  ++ +M    +  S+  L   +CK       L +YR++
Sbjct: 516 YTFLIEGIGFGGCLNDARDLATTLVNMDAISEH-SFERLYKTFCK-------LDVYRQL 566



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 120/318 (37%), Gaps = 69/318 (21%)

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
           R N+ + S  +     T  INR        ++      D      ++  CK     E+L 
Sbjct: 19  RTNSHSNSRTLPILNETTNINRTLSSVSKPQTHTLDFKDTHLLKSLSRSCKAGNFNESLY 78

Query: 178 LYREMVSKGIKPTVV----------------------------------TYNTLFLGLFE 203
             R +V+KG KP VV                                   YN +  G   
Sbjct: 79  FLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGHPDLIAYNAIITGFCR 138

Query: 204 IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC------ 257
            ++++ A ++ + M+    + D  TYN  I  LC  G +  A+E    L    C      
Sbjct: 139 ANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVT 198

Query: 258 -------------------------ELDIQ----AYNCLIDGLCKSGRLEIALELFRSLP 288
                                    E+++Q     YN +I G+C+ G ++ A ++  S+ 
Sbjct: 199 YTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSIS 258

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
            +    DV+TYNI++ GL N G+ +  ++L  DM       NV+ +  LI    R  K  
Sbjct: 259 SKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVE 318

Query: 349 KVIELLHKMKEKKVMPDA 366
           + + LL  MK+K + PD 
Sbjct: 319 EGVGLLKDMKKKGLKPDG 336


>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 660

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 188/354 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+    N  ID LCK+  +  A  +  +M+G+   PDVVTY +++  LC+   ++EA  
Sbjct: 257 SPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVG 316

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L+ EM+  G++P VV    ++  LCKN K++EA  L   M+  ++  +   Y+ L+ GF 
Sbjct: 317 LWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFW 376

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G I++A  +   M + GC+   V+YNIL+N YC    +E+A +L  +M + G+ P   
Sbjct: 377 RAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRY 436

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YN L  GL + HQ++ A     +        D  + N  ID  CK   +  A+ELF+ +
Sbjct: 437 SYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEM 496

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D   Y  LI+GL   G   +A ELF  + +  +  +V  YNIM+H LC  G +
Sbjct: 497 DYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDL 556

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            +A  +FL M +  + P+++ + TLI+   + ++  + ++L   M+ K V PD+
Sbjct: 557 KRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDS 610



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 190/365 (52%), Gaps = 4/365 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY T++  LC      +A  L+ +M    + PDVV   +LI GLC  +   EA  L
Sbjct: 293 PDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFEL 352

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+   ++ SV  +N ++    + G +D+A  ++  M      P   TY+ L++ +C 
Sbjct: 353 ASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCT 412

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G + +AE L   ME+ G   D  SYN L+ G CK  ++++A +   + +  G    +V+
Sbjct: 413 IGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVS 472

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            N L     ++ +V+ AL+LF+EM    + AD  TY T I+GL   GY   A ELF  + 
Sbjct: 473 CNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQM- 531

Query: 254 ILKCELD--IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
            LK ++D  +  YN ++  LCK G L+ A ++F  + ++ ++ D+VTYN +I+ L  + +
Sbjct: 532 -LKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSR 590

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
             +A DLF DM    V P+ + F  LI+G +   + +   E+   M E  ++ D  +   
Sbjct: 591 AMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYMMENGIILDREVSER 650

Query: 372 VVDLL 376
           ++ +L
Sbjct: 651 LISVL 655



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 177/317 (55%), Gaps = 4/317 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V    +I GLCK   V++A  L  +M   NI   V  YN+LI G   A   ++A  
Sbjct: 327 KPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYT 386

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M   G +P VVT+N++++  C  G M++A  L+  M    V P+ ++Y+ L+ G C
Sbjct: 387 IISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLC 446

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            T ++++A         +G   D VS NILI+ +CK K+V+ AL L++EM  KG++   V
Sbjct: 447 KTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAV 506

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  GLF +     A +LFE+M +  +  + + YN  +  LCK G +  A ++F  L
Sbjct: 507 TYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIF--L 564

Query: 253 GILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +++ E+  DI  YN LI  L K+ R   AL+LF+ +  + +  D +T+  +I+GL ++G
Sbjct: 565 HMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEG 624

Query: 311 QMDKAHDLFLDMEENAV 327
           +   A++++  M EN +
Sbjct: 625 RSTLAYEVWEYMMENGI 641



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 178/392 (45%), Gaps = 41/392 (10%)

Query: 12  CKPNTVTYNTIIDGLCKE---GFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           C+   + YN  I  L K      V+K   + L  KG  + P   TY+  I  LC +N   
Sbjct: 186 CREFGIDYNRYIGVLIKNCCFDLVEKYYGMALS-KGLCLTP--FTYSRWISALCQSNRIE 242

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
             + L  +M   G  P +   N+ +D LCK  ++ +A ++++ M  +   P+  TY+T++
Sbjct: 243 LVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVV 302

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS---- 184
              C   + + A  L+  M  MG K D V+   LI G CKN +VEEA  L   M+S    
Sbjct: 303 GCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIE 362

Query: 185 -------------------------------KGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
                                           G +P VVTYN L      I  +E A  L
Sbjct: 363 LSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENL 422

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
             +M+   V  D  +YN  + GLCK   + +A         +    DI + N LID  CK
Sbjct: 423 ITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCK 482

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
             +++ ALELF+ +  + + AD VTY  +I+GL + G  + A +LF  M +  + PNV +
Sbjct: 483 VKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNL 542

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +  ++H   ++    +  ++   M +K+++PD
Sbjct: 543 YNIMLHHLCKVGDLKRAQKIFLHMIQKEILPD 574



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 155/348 (44%), Gaps = 4/348 (1%)

Query: 31  FVDKAKALFLQMKGENINPDVVTYNSL----IHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           FVD   AL  +  G   +  V  + SL    + G   A  ++     F EM+  G +   
Sbjct: 131 FVDGNFALLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFG 190

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
           + +N  +  L KN   D   +   + + + +    FTYS  +   C + +I   EEL   
Sbjct: 191 IDYNRYIGVLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLAD 250

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M+  G   D  + NI I+  CK   + +AL +  +M  KG  P VVTY T+   L    +
Sbjct: 251 MDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKR 310

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
              A+ L+EEM +  +  D       I GLCKN  + EA EL   +  L  EL +  YN 
Sbjct: 311 FSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNA 370

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LI G  ++G ++ A  +   +        VVTYNI+++  C  G M+KA +L   ME + 
Sbjct: 371 LISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSG 430

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           V P+   +  L+ G  + ++  K    +    E     D    ++++D
Sbjct: 431 VNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILID 478



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           Y  ++ G  + G  D     F +M         + YN  I  L     ++  ++ +   +
Sbjct: 158 YRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCCFDLVEKYYGMAL 217

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            +G+  +  T++  +  LC++ +++    LL  M +    P+ +  +  +D  C   +++
Sbjct: 218 SKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLH 277

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A ++   M   G   D V+Y  ++   C NK   EA+ L+ EMV  G+KP VV    L 
Sbjct: 278 DALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALI 337

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            GL +  +VE A +L   M   ++    S YN  I G  + G I +A  +   +    CE
Sbjct: 338 FGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCE 397

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
             +  YN L++  C  G +E A  L   +    +  D  +YN ++ GLC   Q+DKA   
Sbjct: 398 PGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAF 457

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             D  E     +++    LI  F ++ K    +EL  +M  K +  DA
Sbjct: 458 VSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADA 505



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 138/356 (38%), Gaps = 39/356 (10%)

Query: 46  NINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDE 104
           +I  D    N ++ GL   +D   A R ++    + G   S      I+  L  +G    
Sbjct: 82  DIELDPFVVNLVVRGL---SDSETAVRFYWWAESRPGFDHSQFAIAYIVSLLFVDGNFAL 138

Query: 105 ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
            S  L  +  + V  +   Y  L+ G+   GK +     F  M   GC+   + YN  I 
Sbjct: 139 LSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIG 198

Query: 165 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAA 224
              KN   +     Y   +SKG+  T  TY+     L + +++E   +L  +M R   + 
Sbjct: 199 VLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSP 258

Query: 225 DTSTYNTFIDGLCK-----------------------------------NGYIVEAVELF 249
           D    N +ID LCK                                   N    EAV L+
Sbjct: 259 DIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLW 318

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +  +  + D+ A   LI GLCK+ ++E A EL   +    +   V  YN +I G    
Sbjct: 319 EEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRA 378

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           G +DKA+ +   M  N   P V+ +  L++ +  I    K   L+ KM+   V PD
Sbjct: 379 GSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPD 434



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 33/160 (20%), Positives = 64/160 (40%)

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           ++   VA   S Y   + G  + G     +  F  + +  C      YN  I  L K+  
Sbjct: 146 VRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCC 205

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
            ++  + +     + L     TY+  I  LC   +++   +L  DM+    +P++     
Sbjct: 206 FDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNI 265

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            I    + N+    ++++ KM+ K  +PD    + VV  L
Sbjct: 266 YIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCL 305


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 189/365 (51%), Gaps = 3/365 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+   Y  +I  LCK   +D A + F +M      PD VTY  L+H L  A  W +  +
Sbjct: 119 KPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQ 178

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM+ +G  P +VT+  +++  CK G++D+A  L+  +      P+   YSTL+DG C
Sbjct: 179 IFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLC 238

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              + + A ELF    + G   D + Y   I+G CK  +++EA +++ +M+  G  P  V
Sbjct: 239 KHDRHDEARELFEM--AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPV 296

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA-VELFRT 251
           +YN +   L + ++V  A +L ++                +DGLCK+  + EA V L R 
Sbjct: 297 SYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERM 356

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L        +  Y+ +IDGLCK+ RL+ A  + + + R   V DVVTY  +I   C  G+
Sbjct: 357 LETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGR 416

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A +LF  M E   A +V+ +  LI G+ R  K  + I ++ +M  + + P+   +S 
Sbjct: 417 LDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLST 476

Query: 372 VVDLL 376
           +VD L
Sbjct: 477 IVDGL 481



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 188/369 (50%), Gaps = 3/369 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+  + +P+  TY T+I G CK   + +A  L  +MK   I P +VT+ SLI  LC  N 
Sbjct: 43  ELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNF 102

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            ++A ++F +M+D  V+P    + V++  LCK  K+D A+   + MVQ    P+  TY+ 
Sbjct: 103 TDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTV 162

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+       K  +  ++F  M S G   + V+Y  ++NGYCK   +++ALSL R +   G
Sbjct: 163 LVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTG 222

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
             P+   Y+TL  GL +  + + A +LF EM   DV  D   Y +FI GLCK G + EA 
Sbjct: 223 RSPSGSLYSTLIDGLCKHDRHDEARELF-EMAAGDV-QDVIVYTSFISGLCKAGKLDEAK 280

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            +   +    C  D  +YN +I  LCK  R+  A EL      R  +  V    +++ GL
Sbjct: 281 AVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGL 340

Query: 307 CNDGQMDKAHDLFLDMEENA-VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           C   ++++A  +   M E    AP+V+ +  +I G  + ++      +L KM+    +PD
Sbjct: 341 CKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPD 400

Query: 366 ASIVSMVVD 374
               + ++D
Sbjct: 401 VVTYTAIID 409



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 181/364 (49%), Gaps = 5/364 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           NT T N++++    +G   +A  +F         PD  TY +LI G C A    +A  L 
Sbjct: 16  NTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLL 75

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM   G+ P++VTF  ++ +LC+    D+A ++   M+   V+P+AF Y+ ++   C  
Sbjct: 76  GEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKI 135

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            K++ A   F  M   GC  D V+Y +L++   K  + E+   ++ EM+SKG  P +VTY
Sbjct: 136 NKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTY 195

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR-TLG 253
            T+  G  +  +++ AL L   ++    +   S Y+T IDGLCK+    EA ELF    G
Sbjct: 196 ATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAG 255

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            ++   D+  Y   I GLCK+G+L+ A  +   +       D V+YN++I+ LC D ++ 
Sbjct: 256 DVQ---DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVS 312

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK-KVMPDASIVSMV 372
           +A +L     E    P V +   L+ G  +  +  +   +L +M E     P     S V
Sbjct: 313 EAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAV 372

Query: 373 VDLL 376
           +D L
Sbjct: 373 IDGL 376



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/207 (39%), Positives = 122/207 (58%), Gaps = 1/207 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V+YN II  LCK+  V +AK L  Q       P V     L+ GLC +    EA 
Sbjct: 291 CAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEAC 350

Query: 72  RLFFEMMDQGVQ-PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            +   M++ G + PSVVT++ ++D LCK  ++D+A  +L  M +    P+  TY+ ++D 
Sbjct: 351 VILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDA 410

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           FC  G+++ A ELF  M   GC  D V+YNILI GYC+  +V+EA+++  EM  +GI+P 
Sbjct: 411 FCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPN 470

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEM 217
           VV+ +T+  GL +  +VE A  L E+M
Sbjct: 471 VVSLSTIVDGLCKESRVEEARLLMEKM 497



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 155/341 (45%), Gaps = 39/341 (11%)

Query: 73  LFFEMMDQ--GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           LFF+      G Q +  T N +++    +G   EA R+    +    RP+ FTY TL+ G
Sbjct: 2   LFFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRG 61

Query: 131 FCLTGKINRAEELFGSMESMG-----------------------------------CKHD 155
           FC   +I +A  L G M++ G                                    K D
Sbjct: 62  FCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPD 121

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
              Y ++I   CK  +++ A S +  MV  G  P  VTY  L   LF+  + E   ++FE
Sbjct: 122 AFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFE 181

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
           EM     + +  TY T ++G CK G I +A+ L R L           Y+ LIDGLCK  
Sbjct: 182 EMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHD 241

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           R + A ELF        V DV+ Y   I GLC  G++D+A  + + M E   AP+ + + 
Sbjct: 242 RHDEARELFEMAAGD--VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYN 299

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +I+   + N+ S+  EL+ +  E+K MP   + +++VD L
Sbjct: 300 VIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGL 340


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 187/354 (52%), Gaps = 4/354 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  +TY  ++ GLC+    D+A+A    M G     +VV +N++I G        EA 
Sbjct: 276 CMPGVMTYGFLLQGLCRVRQADEARA----MLGRVPELNVVLFNTVIGGCLAEGKLAEAT 331

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L+  M  +G QP   T++++M  LCK G++  A RLL  M ++   PN  TY+ ++  F
Sbjct: 332 ELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSF 391

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G  +    L   M + G   +   YN +I   CK+  ++EA+ L +EM S+G  P +
Sbjct: 392 CKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDI 451

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +YNT+   L    Q+E A  +FE +  + V A+  TYNT I  L ++G   +AV L + 
Sbjct: 452 CSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKE 511

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +  C LD+ +YN LI  +CK G ++ +L L   +  + +  + V+YNI+I  LC + +
Sbjct: 512 MILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERR 571

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +  A +L   M    +AP+++ + TLI+G  ++      + LL K+  + V PD
Sbjct: 572 VRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 625



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 179/337 (53%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G V + N V +NT+I G   EG + +A  L+  M  +   PD  TY+ L+HGLC     
Sbjct: 303 LGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRI 362

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           + A RL  EM  +G  P+VVT+ +++   CKNG  D+   LL+ M  + +  N+  Y+ +
Sbjct: 363 SSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGM 422

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +   C  G+++ A  L   M S GC  D  SYN +I   C N+++EEA  ++  ++ +G+
Sbjct: 423 IYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGV 482

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
               +TYNT+   L    + + A++L +EM     + D  +YN  I  +CK+G +  ++ 
Sbjct: 483 VANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLV 542

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +     + +  +YN LI  LCK  R+  ALEL + +  + L  D+VTYN +I+GLC
Sbjct: 543 LLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLC 602

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
             G M  A +L   +    V P++I +  LI    ++
Sbjct: 603 KMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKV 639



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 171/344 (49%), Gaps = 4/344 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P T T+      LC+ G  ++A AL   M      PD V Y ++IH LC      EA  L
Sbjct: 173 PTTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 232

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+  G    V TF+ ++  +C  G++ EA+RL+D M+ +   P   TY  L+ G C 
Sbjct: 233 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 292

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             + + A  + G +  +    + V +N +I G     ++ EA  LY  M  KG +P   T
Sbjct: 293 VRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHT 348

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  GL ++ ++  A++L  EM++   A +  TY   +   CKNG   +   L   + 
Sbjct: 349 YSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMS 408

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                L+ Q YN +I  LCK GR++ A+ L + +  +    D+ +YN +I+ LCN+ QM+
Sbjct: 409 AKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQME 468

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           +A  +F ++ E  V  N I + T+IH  +R  +    + L  +M
Sbjct: 469 EAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM 512



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 150/329 (45%), Gaps = 40/329 (12%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEA 105
           + P   +YN ++  L  A+   +A  L+  M+ +  V P+  TF V    LC+ G+ +EA
Sbjct: 135 VQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEA 194

Query: 106 SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILING 165
             LL  M +    P+A  Y T++   C  G +  A  L   M  MGC  D  +++ ++ G
Sbjct: 195 LALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRG 254

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
            C    V EA  L   M++KG  P V+TY  L  GL  + Q + A  +   +   +V   
Sbjct: 255 MCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVV-- 312

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
              +NT I G    G + EA EL+ T+G+  C+ D   Y+ L+ GLCK GR+  A+ L R
Sbjct: 313 --LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLR 370

Query: 286 SLPRRVLVADVVTYNI-----------------------------------MIHGLCNDG 310
            + ++    +VVTY I                                   MI+ LC DG
Sbjct: 371 EMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDG 430

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           +MD+A  L  +M      P++  + T+I+
Sbjct: 431 RMDEAMGLIQEMRSQGCNPDICSYNTIIY 459



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 147/332 (44%), Gaps = 45/332 (13%)

Query: 75  FEMMDQ-----GVQPSVVTFNVIMD----------------------------------- 94
             ++DQ     GVQPS  ++NV++                                    
Sbjct: 123 LHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAA 182

Query: 95  -ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCK 153
             LC+ G+ +EA  LL  M +    P+A  Y T++   C  G +  A  L   M  MGC 
Sbjct: 183 RALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCA 242

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            D  +++ ++ G C    V EA  L   M++KG  P V+TY  L  GL  + Q + A  +
Sbjct: 243 ADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAM 302

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
              +   +V      +NT I G    G + EA EL+ T+G+  C+ D   Y+ L+ GLCK
Sbjct: 303 LGRVPELNVV----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCK 358

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
            GR+  A+ L R + ++    +VVTY I++H  C +G  D    L  +M    +  N   
Sbjct: 359 LGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQG 418

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +  +I+   +  +  + + L+ +M+ +   PD
Sbjct: 419 YNGMIYALCKDGRMDEAMGLIQEMRSQGCNPD 450



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 78/145 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  + V+YN +I  +CK+G VD++  L  +M  + I P+ V+YN LI  LC      +A 
Sbjct: 517 CSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDAL 576

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +M++QG+ P +VT+N +++ LCK G M  A  LL+ +   +V P+  TY+ L+   
Sbjct: 577 ELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWH 636

Query: 132 CLTGKINRAEELFGSMESMGCKHDD 156
           C    ++ A  L     +  C   D
Sbjct: 637 CKVRLLDDAAMLLNRAMAAVCPVGD 661


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 184/336 (54%), Gaps = 2/336 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N   +N +++  CKEG +  A+ +F ++   ++ P VV++N+LI+G C   + +E  RL 
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M     +P V T++ +++ LCK  KMD A  L D M +R + PN   ++TL+ G    
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+I+  +E +  M S G + D V YN L+NG+CKN ++  A ++   M+ +G++P  +TY
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            TL  G      VE AL++ +EM ++ +  D   ++  + G+CK G +++A    R +  
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + D   Y  ++D  CK G  +   +L + +     V  VVTYN++++GLC  GQM  
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKN 538

Query: 315 AHDLFLDMEEN-AVAPNVIIFVTLIHGFVRINKPSK 349
           A D+ LD   N  V P+ I + TL+ G  R    SK
Sbjct: 539 A-DMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 169/316 (53%)

Query: 50  DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
           +V  +N L++  C   + ++A+++F E+  + +QP+VV+FN +++  CK G +DE  RL 
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298

Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
             M +   RP+ FTYS L++  C   K++ A  LF  M   G   +DV +  LI+G+ +N
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
            E++     Y++M+SKG++P +V YNTL  G  +   +  A  + + M R  +  D  TY
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
            T IDG C+ G +  A+E+ + +     ELD   ++ L+ G+CK GR+  A    R + R
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
             +  D VTY +M+   C  G       L  +M+ +   P+V+ +  L++G  ++ +   
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKN 538

Query: 350 VIELLHKMKEKKVMPD 365
              LL  M    V+PD
Sbjct: 539 ADMLLDAMLNIGVVPD 554



 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 156/294 (53%), Gaps = 3/294 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TY+ +I+ LCKE  +D A  LF +M    + P+ V + +LIHG     + +  K 
Sbjct: 307 RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKE 366

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            + +M+ +G+QP +V +N +++  CKNG +  A  ++D M++R +RP+  TY+TL+DGFC
Sbjct: 367 SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFC 426

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A E+   M+  G + D V ++ L+ G CK   V +A    REM+  GIKP  V
Sbjct: 427 RGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDV 486

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  +     +    +   KL +EMQ D       TYN  ++GLCK G +  A  L   +
Sbjct: 487 TYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAM 546

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
             +    D   YN L++G     R   + + +   P   +VAD+ +Y  +++ L
Sbjct: 547 LNIGVVPDDITYNTLLEG---HHRHANSSKRYIQKPEIGIVADLASYKSIVNEL 597



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 156/293 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  V++NT+I+G CK G +D+   L  QM+     PDV TY++LI+ LC  N  + A  
Sbjct: 272 QPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHG 331

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  +G+ P+ V F  ++    +NG++D        M+ + ++P+   Y+TL++GFC
Sbjct: 332 LFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFC 391

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  +   M   G + D ++Y  LI+G+C+  +VE AL + +EM   GI+   V
Sbjct: 392 KNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRV 451

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            ++ L  G+ +  +V  A +   EM R  +  D  TY   +D  CK G      +L + +
Sbjct: 452 GFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
                   +  YN L++GLCK G+++ A  L  ++    +V D +TYN ++ G
Sbjct: 512 QSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 163/335 (48%)

Query: 30  GFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTF 89
           GF+  A   F   +    +  +    +L+  +   N        + E++D G   +V  F
Sbjct: 184 GFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVF 243

Query: 90  NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
           N++M++ CK G + +A ++ D + +R ++P   +++TL++G+C  G ++    L   ME 
Sbjct: 244 NILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEK 303

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
              + D  +Y+ LIN  CK  +++ A  L+ EM  +G+ P  V + TL  G     +++ 
Sbjct: 304 SRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDL 363

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
             + +++M    +  D   YNT ++G CKNG +V A  +   +       D   Y  LID
Sbjct: 364 MKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLID 423

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           G C+ G +E ALE+ + + +  +  D V ++ ++ G+C +G++  A     +M    + P
Sbjct: 424 GFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKP 483

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           + + +  ++  F +        +LL +M+    +P
Sbjct: 484 DDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 129/255 (50%)

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           N + ++ LM+ FC  G I+ A+++F  +     +   VS+N LINGYCK   ++E   L 
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            +M     +P V TY+ L   L + ++++ A  LF+EM +  +  +   + T I G  +N
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G I    E ++ +     + DI  YN L++G CK+G L  A  +   + RR L  D +TY
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
             +I G C  G ++ A ++  +M++N +  + + F  L+ G  +  +       L +M  
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478

Query: 360 KKVMPDASIVSMVVD 374
             + PD    +M++D
Sbjct: 479 AGIKPDDVTYTMMMD 493



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/137 (21%), Positives = 68/137 (49%)

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G+I +A++ FR     + ++ I+    L+D + K          +  +       +V  +
Sbjct: 184 GFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVF 243

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           NI+++  C +G +  A  +F ++ + ++ P V+ F TLI+G+ ++    +   L H+M++
Sbjct: 244 NILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEK 303

Query: 360 KKVMPDASIVSMVVDLL 376
            +  PD    S +++ L
Sbjct: 304 SRTRPDVFTYSALINAL 320


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 185/354 (52%), Gaps = 9/354 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VT+ T I   C+ G +D+A  L  QM      PDV+ Y++L++G       +EA 
Sbjct: 38  CHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEAL 97

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M+    +P+ V +N  +  LC  G+ +E   L+  MV++D  PN  T+STL++  
Sbjct: 98  KLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSL 154

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    +  A E+   M+  G   D VSYN +I+ +      ++AL L + M+    KP  
Sbjct: 155 CQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSMLC---KPDT 211

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +++N +   L +  +   A++L  +M + D   +  T+N  ID LC+NG + +A+E+F  
Sbjct: 212 ISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFEL 271

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +C  DI  Y+ LI+G  + G  E+A +LFRS+P R   AD+ +YN  + GLC   +
Sbjct: 272 MPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCR---ADIFSYNATLKGLCMAAR 328

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            D A +L  DM      PN + F  LI    +    ++ I++  +M +  + PD
Sbjct: 329 WDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPD 382



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 166/332 (50%), Gaps = 9/332 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T++T+I+ LC+   V+ A  +  QM+     PDVV+YN++I         ++A 
Sbjct: 140 CPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDAL 199

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M+    +P  ++FN ++  LCK  +  +A  L+  M+++D R N  T++ L+D  
Sbjct: 200 KLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSL 256

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++  A E+F  M    C  D V+Y+ LING+ +    E A  L+R M  +     +
Sbjct: 257 CQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRA---DI 313

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +YN    GL    + + A +L  +M  +D   +  T+N  I  LC+ G +  A++++  
Sbjct: 314 FSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQ 373

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       DI  YN LI+G  + GRL+ AL+   ++P      D ++YN ++ GLC   +
Sbjct: 374 MPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCE---PDTISYNSILKGLCRAER 430

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
              A  L  +M      PN + F      F++
Sbjct: 431 WKDAEKLVTEMLRKNCTPNEVTFKYANQLFIK 462



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 175/356 (49%), Gaps = 9/356 (2%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           ++C+PNTV YN  + GLC  G  ++   L  +M  ++  P+  T+++LI+ LC       
Sbjct: 103 MLCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEY 162

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +  +M   G  P VV++N I+       + D+A +LL  M+    +P+  +++ ++ 
Sbjct: 163 AVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLK 219

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             C   +   A EL   M    C+ +++++NILI+  C+N +V++A+ ++  M      P
Sbjct: 220 CLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMP 279

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            +VTY++L  G  E    E A  LF  M      AD  +YN  + GLC      +A EL 
Sbjct: 280 DIVTYSSLINGFSEQGLDEMAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELI 336

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +    C  +   +N LI  LC+ G +  A++++  +P+  +  D+ TYN +I+G    
Sbjct: 337 ADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQ 396

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           G++D A      M      P+ I + +++ G  R  +     +L+ +M  K   P+
Sbjct: 397 GRLDDALKFLSTM---PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPN 449


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 195/393 (49%), Gaps = 35/393 (8%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTYN +I GLCK   V +A  +   + G+ +  DVVTY +L+ G C    +    +L  E
Sbjct: 261 VTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDE 320

Query: 77  MMDQGVQPS-----------------------------------VVTFNVIMDELCKNGK 101
           M++ G  P+                                   +  +N +++ LCK G 
Sbjct: 321 MVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGD 380

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D+A  L   M   ++RPN  TYS L+D FC +G+++ A   F  M   G      +YN 
Sbjct: 381 LDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNS 440

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LING CK  ++  A SL+ EM +KG++PT  T+ +L  G  +  QV+ A KL+ +M  + 
Sbjct: 441 LINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNG 500

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           +  +  T+   I GLC    + EA ELF  L   K +     YN LI+G C+ G+++ A 
Sbjct: 501 ITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAF 560

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           EL   + ++ LV D  TY  +I GLC+ G++ KA D   D+ +  V  N + +  L+HG+
Sbjct: 561 ELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGY 620

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +  +  + +    +M ++ +  D    ++++D
Sbjct: 621 CQEGRLMEALSASCEMIQRGINMDLVCHAVLID 653



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 203/395 (51%), Gaps = 34/395 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P   T+ ++I G CK+  V KA  L+ +M    I P+V T+ +LI GLC  N   EA  
Sbjct: 467 EPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASE 526

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF E++++ ++P+ VT+NV+++  C++GK+D+A  LL+ M Q+ + P+ +TY  L+ G C
Sbjct: 527 LFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLC 586

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            TG++++A++    +     K +++ Y+ L++GYC+   + EALS   EM+ +GI   +V
Sbjct: 587 STGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLV 646

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            +  L  G  +    +    L ++M    +  D   Y + ID   K G   +A E +  +
Sbjct: 647 CHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLM 706

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL------PRRV--------------- 291
              +C  ++  Y  L++GLCK+G ++ A  LF+ +      P  +               
Sbjct: 707 VTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNM 766

Query: 292 -------------LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
                        L+A+ VT+NI+I G C  G+  +A  +  +M EN + P+ + + TLI
Sbjct: 767 KEAIGLHHAMLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLI 826

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           + + R       ++L   M  + + PD    ++++
Sbjct: 827 YEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLI 861



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 195/361 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P     + ++DGL K+G +D A  L +++      P++  YN+LI+ LC   D ++A+ L
Sbjct: 328 PTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELL 387

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           +  M    ++P+ +T+++++D  C++G++D A    D M+Q  +    + Y++L++G C 
Sbjct: 388 YSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCK 447

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ AE LF  M + G +    ++  LI+GYCK+ +V++A  LY +M+  GI P V T
Sbjct: 448 FGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYT 507

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  GL   +++  A +LF+E+    +     TYN  I+G C++G I +A EL   + 
Sbjct: 508 FTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMH 567

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D   Y  LI GLC +GR+  A +    L ++ +  + + Y+ ++HG C +G++ 
Sbjct: 568 QKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLM 627

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A     +M +  +  +++    LI G ++        +LL  M ++ + PD  I + ++
Sbjct: 628 EALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMI 687

Query: 374 D 374
           D
Sbjct: 688 D 688



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 180/360 (50%), Gaps = 2/360 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G  G V  PN   YN +I+ LCK G +DKA+ L+  M   N+ P+ +TY+ LI   C + 
Sbjct: 357 GRFGFV--PNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSG 414

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             + A   F  M+  G+  +V  +N +++  CK G +  A  L   M  + V P A T++
Sbjct: 415 RLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFT 474

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           +L+ G+C   ++ +A +L+  M   G   +  ++  LI+G C   ++ EA  L+ E+V +
Sbjct: 475 SLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVER 534

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            IKPT VTYN L  G     +++ A +L E+M +  +  DT TY   I GLC  G + +A
Sbjct: 535 KIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKA 594

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            +    L     +L+   Y+ L+ G C+ GRL  AL     + +R +  D+V + ++I G
Sbjct: 595 KDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDG 654

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
                      DL  DM +  + P+ +I+ ++I  + +     K  E    M  ++  P+
Sbjct: 655 ALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPN 714



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 188/386 (48%), Gaps = 38/386 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA-- 70
           +P+  T + ++  +C+     +AK     M+    +  +VTYN LIHGLC  +  +EA  
Sbjct: 222 RPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVE 281

Query: 71  -KR--------------------------------LFFEMMDQGVQPSVVTFNVIMDELC 97
            KR                                L  EM++ G  P+    + ++D L 
Sbjct: 282 VKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLR 341

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K GK+D+A  L+  + +    PN F Y+ L++  C  G +++AE L+ +M  M  + + +
Sbjct: 342 KQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGI 401

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y+ILI+ +C++  ++ A+S +  M+  GI  TV  YN+L  G  +   +  A  LF EM
Sbjct: 402 TYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEM 461

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
               V    +T+ + I G CK+  + +A +L+  +       ++  +  LI GLC + ++
Sbjct: 462 TNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKM 521

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A ELF  L  R +    VTYN++I G C DG++DKA +L  DM +  + P+   +  L
Sbjct: 522 AEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPL 581

Query: 338 IHGFV---RINKPSKVIELLHKMKEK 360
           I G     R++K    I+ LHK   K
Sbjct: 582 ISGLCSTGRVSKAKDFIDDLHKQNVK 607



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 173/352 (49%), Gaps = 34/352 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VTYN +I+G C++G +DKA  L   M  + + PD  TY  LI GLC     ++AK 
Sbjct: 537 KPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKD 596

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              ++  Q V+ + + ++ ++   C+ G++ EA      M+QR +  +   ++ L+DG  
Sbjct: 597 FIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGAL 656

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                    +L   M   G + D+V Y  +I+ Y K    ++A   +  MV++   P VV
Sbjct: 657 KQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVV 716

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L  GL +  +++ A  LF+ MQ  +V  ++ TY  F+D L K G + EA+ L   +
Sbjct: 717 TYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAM 776

Query: 253 --GILK------------CEL--------------------DIQAYNCLIDGLCKSGRLE 278
             G+L             C+L                    D   Y+ LI   C+SG + 
Sbjct: 777 LKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVG 836

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
            +++L+ ++  R L  D+V YN++I+G C +G++DKA +L  DM    + P+
Sbjct: 837 ASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888



 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 175/366 (47%), Gaps = 1/366 (0%)

Query: 12  CK-PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           CK  +T+ +N ++        +  A  +   M   N+ P+V T ++L++GL     +   
Sbjct: 150 CKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITV 209

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             LF E ++ GV+P   T + ++  +C+      A   +  M       +  TY+ L+ G
Sbjct: 210 WELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHG 269

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C   +++ A E+  S+   G   D V+Y  L+ G+C+ ++ E  + L  EMV  G  PT
Sbjct: 270 LCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPT 329

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
               + L  GL +  +++ A +L  ++ R     +   YN  I+ LCK G + +A  L+ 
Sbjct: 330 EAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYS 389

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            + ++    +   Y+ LID  C+SGRL++A+  F  + +  +   V  YN +I+G C  G
Sbjct: 390 NMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFG 449

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            +  A  LF++M    V P    F +LI G+ +  +  K  +L +KM +  + P+    +
Sbjct: 450 DLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFT 509

Query: 371 MVVDLL 376
            ++  L
Sbjct: 510 ALISGL 515



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 170/361 (47%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   T + +++GL K         LF +     + PD  T ++++  +C   D+  AK  
Sbjct: 188 PEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEK 247

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   G   S+VT+NV++  LCK  ++ EA  +   +  + +  +  TY TL+ GFC 
Sbjct: 248 IRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCR 307

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +     +L   M  +G    + + + L++G  K  ++++A  L  ++   G  P +  
Sbjct: 308 LQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFV 367

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L   L +   ++ A  L+  M   ++  +  TY+  ID  C++G +  A+  F  + 
Sbjct: 368 YNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMI 427

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  + AYN LI+G CK G L  A  LF  +  + +     T+  +I G C D Q+ 
Sbjct: 428 QDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQ 487

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA  L+  M +N + PNV  F  LI G    NK ++  EL  ++ E+K+ P     ++++
Sbjct: 488 KAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLI 547

Query: 374 D 374
           +
Sbjct: 548 E 548



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 107/178 (60%), Gaps = 1/178 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY  +++GLCK G +D+A  LF +M+  N+ P+ +TY   +  L    +  EA 
Sbjct: 711 CFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAI 770

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M+ +G+  + VT N+I+   CK G+  EA+++L  M +  + P+  TYSTL+  +
Sbjct: 771 GLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEY 829

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           C +G +  + +L+ +M + G + D V+YN+LI G C N E+++A  L  +M+ +GI P
Sbjct: 830 CRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIP 887



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 147/330 (44%), Gaps = 17/330 (5%)

Query: 45  ENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQP-----------------SVV 87
           +N+N    +Y  ++H L H+  +  A  L   ++ +   P                 S +
Sbjct: 97  KNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRESHPKCVFSHFLDSYKRCKFSSTL 156

Query: 88  TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
            FN+++     + ++ +A  ++ LM   ++ P   T S L++G     K     ELF   
Sbjct: 157 GFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDES 216

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
            + G + D  + + ++   C+ K+   A    R M + G   ++VTYN L  GL +  +V
Sbjct: 217 VNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRV 276

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
             A+++   +    +AAD  TY T + G C+       ++L   +  L       A + L
Sbjct: 277 SEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGL 336

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           +DGL K G+++ A EL   + R   V ++  YN +I+ LC  G +DKA  L+ +M    +
Sbjct: 337 VDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNL 396

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            PN I +  LI  F R  +    I    +M
Sbjct: 397 RPNGITYSILIDSFCRSGRLDVAISYFDRM 426



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 137/314 (43%), Gaps = 21/314 (6%)

Query: 65  NDWNEAKRLF-FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
           +D   A R F F  + + +  S  ++ +++  L  +     A+ LL  ++ R+  P    
Sbjct: 81  DDAKLALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRESHPKC-V 139

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDD-VSYNILINGYCKNKEVEEALSLYREM 182
           +S  +D +                    CK    + +N+L+  Y  +  + +A+ + + M
Sbjct: 140 FSHFLDSY------------------KRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLM 181

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
            +  + P V T + L  GL ++ +     +LF+E     V  D  T +  +  +C+    
Sbjct: 182 FANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDF 241

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
           + A E  R +     +L I  YN LI GLCK  R+  A+E+ RSL  + L ADVVTY  +
Sbjct: 242 LRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTL 301

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           + G C   Q +    L  +M E   +P       L+ G  +  K     EL+ K+     
Sbjct: 302 VLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGF 361

Query: 363 MPDASIVSMVVDLL 376
           +P+  + + +++ L
Sbjct: 362 VPNLFVYNALINSL 375


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/353 (33%), Positives = 182/353 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTY+T ID  CKEG + +A   F+ M+   + P+  TY SLI   C A +  EA +
Sbjct: 357 KPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALK 416

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  E++  G++ +VVT+  ++D LC+ G+M EA  +   M+   V PN  TY+ L+ GF 
Sbjct: 417 LVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFI 476

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++  A+++   M+    K D + Y  ++ G C    +EEA  L  E+   GI    V
Sbjct: 477 KAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAV 536

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y TL    F+  Q   AL L EEM    + A   TY   IDGLCK+G + EA+  F  +
Sbjct: 537 IYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRM 596

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  + ++  Y  L+DGLCK+   E+A +LF  +  + ++ D + Y  +I G    G +
Sbjct: 597 SEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNL 656

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +A +L   M E  +  ++  +  LI G     +  K   LL +M  K V+PD
Sbjct: 657 QEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPD 709



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 187/361 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYN++IDG  K G +D+   +F QMK  + +PDV+TYN+LI+  C      +A   
Sbjct: 288 PDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEF 347

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G++P+VVT++  +D  CK G + EA +    M +  + PN FTY++L+D  C 
Sbjct: 348 LHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCK 407

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A +L   +   G K + V+Y  L++G C+   ++EA  ++R M++ G+ P   T
Sbjct: 408 AGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQET 467

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G  +  ++E+A  + +EM+   +  D   Y T + GLC    + EA  L   + 
Sbjct: 468 YTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIK 527

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +   Y  L+D   KSG+   AL L   +    L+A  VTY  +I GLC  G + 
Sbjct: 528 ESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQ 587

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A   F  M E  + PNV ++  L+ G  + N      +L  +M +K +MPD    + ++
Sbjct: 588 EAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALI 647

Query: 374 D 374
           D
Sbjct: 648 D 648



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 199/364 (54%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC P    ++ +   L + G +++A   FL+M+   + P   + N+L+H L      + +
Sbjct: 180 VCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLS 239

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           ++ F +M   G++ SV T+N+++D LCK G ++ A  L   M +    P+  TY++L+DG
Sbjct: 240 RKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDG 299

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               G ++    +F  M+   C  D ++YN LIN +CK + + +A     EM + G+KP 
Sbjct: 300 HGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPN 359

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY+T      +   ++ A+K F +M+R  +  +  TY + ID  CK G + EA++L  
Sbjct: 360 VVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVE 419

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +     +L++  Y  L+DGLC+ GR++ A E+FR++    +  +  TY  ++HG     
Sbjct: 420 EILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAK 479

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +M+ A D+  +M+E  + P+++++ T++ G    ++  +   L+ ++KE  +  +A I +
Sbjct: 480 EMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYT 539

Query: 371 MVVD 374
            ++D
Sbjct: 540 TLMD 543



 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 164/306 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N VTY  ++DGLC+EG + +A+ +F  M    + P+  TY +L+HG   A +   AK 
Sbjct: 427 KLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKD 486

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM ++ ++P ++ +  I+  LC   +++EA  L+  + +  +  NA  Y+TLMD + 
Sbjct: 487 ILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYF 546

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G+   A  L   M  +G    +V+Y  LI+G CK+  V+EA+  +  M   G++P V 
Sbjct: 547 KSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVA 606

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y  L  GL + +  E A KLF+EM    +  D   Y   IDG  K+G + EA+ L   +
Sbjct: 607 VYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRM 666

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  ELD+ AY  LI GL  SG+++ A  L   +  + ++ D V Y  +I      G++
Sbjct: 667 IEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKV 726

Query: 313 DKAHDL 318
           D+A +L
Sbjct: 727 DEALEL 732


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 187/359 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y T+IDG CK+G V  AK LF +M    + P+  TY+ L++G        E  ++
Sbjct: 191 PNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQM 250

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           +  M   G+ P+   +N ++ E C +G +D+A ++   M ++ +     TY+ L+ G C 
Sbjct: 251 YENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K   A +L   +  +G   + V+YNILING+C  ++++ A+ L+ ++ S G+ PT+VT
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVT 370

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G  ++  +  AL L +EM+   +A    TY   ID   +  +  +A E+   + 
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLME 430

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+  Y+ L+ GLC  G ++ A +LF+SL    L  + V YN MIHG C +G   
Sbjct: 431 KSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSY 490

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +A  L  +M ++ + PNV  F + I    R  K  +   LL +M    + P  S+  MV
Sbjct: 491 RALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 191/359 (53%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++  +I G C+ G+  K   L   ++   ++P+VV Y +LI G C   +   AK LF +M
Sbjct: 160 SFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKM 219

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
              G+ P+  T++V+M+   K G   E  ++ + M +  + PNA+ Y+ L+  +C  G +
Sbjct: 220 NRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMV 279

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           ++A ++F  M   G     ++YNILI G C+ K+  EA+ L  ++   G+ P +VTYN L
Sbjct: 280 DKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNIL 339

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G  ++ +++ A++LF +++   ++    TYNT I G  K   +  A++L + +     
Sbjct: 340 INGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCI 399

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
                 Y  LID   +    E A E+   + +  LV DV TY++++HGLC  G M +A  
Sbjct: 400 APSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASK 459

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           LF  + E  + PN +I+ T+IHG+ +     + + LL++M +  ++P+ +     + LL
Sbjct: 460 LFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLL 518



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 175/362 (48%), Gaps = 1/362 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C   T  Y+T+++        D+A      M  E   P   T+N+L+  L  +N +++A 
Sbjct: 85  CSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAW 144

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F E+  + V     +F +++   C+ G   +  RLL ++ +  + PN   Y+TL+DG 
Sbjct: 145 WIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGC 203

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A+ LF  M  +G   +  +Y++L+NG+ K     E   +Y  M   GI P  
Sbjct: 204 CKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNA 263

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             YN L         V+ A K+F EM+   +A    TYN  I GLC+     EAV+L   
Sbjct: 264 YAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK 323

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +    +I  YN LI+G C   +++ A+ LF  L    L   +VTYN +I G      
Sbjct: 324 VNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVEN 383

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +  A DL  +MEE  +AP+ + +  LI  F R+N   K  E+   M++  ++PD    S+
Sbjct: 384 LAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSV 443

Query: 372 VV 373
           ++
Sbjct: 444 LL 445



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 188/386 (48%), Gaps = 27/386 (6%)

Query: 15  NTVTY----------NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVT----------- 53
           NT TY          + I++ L   G + +A++L L++    I   ++            
Sbjct: 27  NTATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLTQAHFTPCS 86

Query: 54  -----YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
                Y+++++   H++  ++A      M+ +G  P   TFN ++  L ++   D+A  +
Sbjct: 87  TYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWI 146

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
            + +  + V  +A+++  ++ G C  G   +   L   +E  G   + V Y  LI+G CK
Sbjct: 147 FNELKSKVVL-DAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCK 205

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
           +  V  A +L+ +M   G+ P   TY+ L  G F+        +++E M+R  +  +   
Sbjct: 206 DGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYA 265

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           YN  I   C +G + +A ++F  +        +  YN LI GLC+  +   A++L   + 
Sbjct: 266 YNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVN 325

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
           +  L  ++VTYNI+I+G C+  +MD A  LF  ++ + ++P ++ + TLI G+ ++   +
Sbjct: 326 KVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLA 385

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVD 374
             ++L+ +M+E+ + P     ++++D
Sbjct: 386 GALDLVKEMEERCIAPSKVTYTILID 411



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN+V YNT+I G CKEG   +A  L  +M    + P+V ++ S I  LC    W EA+ 
Sbjct: 470 QPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAEL 529

Query: 73  LFFEMMDQGVQPSVVTFNVI 92
           L  +M++ G++PSV  + ++
Sbjct: 530 LLGQMINSGLKPSVSLYKMV 549


>gi|302757523|ref|XP_002962185.1| hypothetical protein SELMODRAFT_77345 [Selaginella moellendorffii]
 gi|300170844|gb|EFJ37445.1| hypothetical protein SELMODRAFT_77345 [Selaginella moellendorffii]
          Length = 442

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 188/361 (52%), Gaps = 4/361 (1%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V Y  II+ L K    D+A A F +M     +PD+ T+  +I GLC A   N A  +F E
Sbjct: 10  VAYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQE 69

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M  +G +P ++ +  ++D L K   MDEA +LL  +V R ++P   TY++ + G C  G+
Sbjct: 70  MNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGR 129

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +  A +L   M  M C  + +  + +  GY    ++EEAL+L  EMV KG+   V  Y  
Sbjct: 130 VEEAGKLVREMGKM-CAAEVL--HCIFGGYVLEGKIEEALALKDEMVKKGVTLDVRCYTN 186

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  GLF + + + A ++FE M +     DT TY   +   CK G +  A ++   +    
Sbjct: 187 LIHGLFYVRRNDEAQEMFEAMVQQGYVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAG 246

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            E +   YN L+DG     R   A+ ++ ++ R++++  +VTYNI++ GLC  GQ   A 
Sbjct: 247 LEANCHIYNSLMDGFLGVNRAREAINVYDTMLRKMVMPSIVTYNILMLGLCKLGQTADAR 306

Query: 317 DLFLDM-EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
            +  +M E + + P ++ + TLIHG  +  +  + I++  +M +  V+PD    + ++  
Sbjct: 307 LVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQA 366

Query: 376 L 376
           L
Sbjct: 367 L 367



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 191/392 (48%), Gaps = 39/392 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  T+  +I GLCK G +++A  +F +M  +   PD++ Y SL+ GL  A+  +EA+
Sbjct: 40  CDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEAR 99

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL---------------------- 109
           +L  E++ +G++P+ VT+   +  LCKNG+++EA +L+                      
Sbjct: 100 KLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKMCAAEVLHCIFGGYVLE 159

Query: 110 ----------DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
                     D MV++ V  +   Y+ L+ G     + + A+E+F +M   G   D  +Y
Sbjct: 160 GKIEEALALKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVQQGYVPDTRTY 219

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
            ++++ +CK  +++ A  +   M + G++     YN+L  G   +++   A+ +++ M R
Sbjct: 220 GMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHIYNSLMDGFLGVNRAREAINVYDTMLR 279

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL----GILKCELDIQAYNCLIDGLCKSG 275
             V     TYN  + GLCK G   +A  + R +    GI+     I +Y  LI GL K+G
Sbjct: 280 KMVMPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVP---TIVSYRTLIHGLGKAG 336

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           R + A+++F  +    +V D  +   +I  L    +MD+A  L  DM    + P+ + + 
Sbjct: 337 RADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYN 396

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            L+       K     ++L +M +   +PD S
Sbjct: 397 ALVKVLCGGAKVGPAWDVLVEMMDNSCVPDGS 428



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 174/365 (47%), Gaps = 39/365 (10%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ + Y +++DGL K   +D+A+ L  ++    + P  VTY S I GLC      EA +
Sbjct: 76  KPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGK 135

Query: 73  LFFEM--------------------------------MDQGVQPSVVTFNVIMDELCKNG 100
           L  EM                                + +GV   V  +  ++  L    
Sbjct: 136 LVREMGKMCAAEVLHCIFGGYVLEGKIEEALALKDEMVKKGVTLDVRCYTNLIHGLFYVR 195

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           + DEA  + + MVQ+   P+  TY  ++  FC  GK+  A ++   M++ G + +   YN
Sbjct: 196 RNDEAQEMFEAMVQQGYVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHIYN 255

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM-QR 219
            L++G+       EA+++Y  M+ K + P++VTYN L LGL ++ Q   A  +  EM +R
Sbjct: 256 SLMDGFLGVNRAREAINVYDTMLRKMVMPSIVTYNILMLGLCKLGQTADARLVLREMRER 315

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCKSGR 276
           D +     +Y T I GL K G   EA+++F  +   G++    D  +   LI  L  + R
Sbjct: 316 DGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVP---DCPSCTSLIQALAMADR 372

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           ++ A +L R +PR  +  D + YN ++  LC   ++  A D+ ++M +N+  P+   F  
Sbjct: 373 MDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVLVEMMDNSCVPDGSTFRA 432

Query: 337 LIHGF 341
           +  GF
Sbjct: 433 MKLGF 437



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 155/333 (46%), Gaps = 39/333 (11%)

Query: 13  KPNTVTYNTIIDGLCK--------------------------------EGFVDKAKALFL 40
           KP  VTY + I GLCK                                EG +++A AL  
Sbjct: 111 KPTEVTYTSFISGLCKNGRVEEAGKLVREMGKMCAAEVLHCIFGGYVLEGKIEEALALKD 170

Query: 41  QMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
           +M  + +  DV  Y +LIHGL +    +EA+ +F  M+ QG  P   T+ +I+   CK G
Sbjct: 171 EMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVQQGYVPDTRTYGMIVSHFCKQG 230

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCK---HDDV 157
           KM  A +++++M    +  N   Y++LMDGF     +NRA E     ++M  K      V
Sbjct: 231 KMQAACKVVEIMDAAGLEANCHIYNSLMDGFL---GVNRAREAINVYDTMLRKMVMPSIV 287

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           +YNIL+ G CK  +  +A  + REM  + GI PT+V+Y TL  GL +  + + A+ +F E
Sbjct: 288 TYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTE 347

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M  + V  D  +  + I  L     + EA +L R +  +    D  AYN L+  LC   +
Sbjct: 348 MVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAK 407

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           +  A ++   +     V D  T+  M  G   D
Sbjct: 408 VGPAWDVLVEMMDNSCVPDGSTFRAMKLGFKAD 440


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 108/314 (34%), Positives = 179/314 (57%), Gaps = 12/314 (3%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + + N V YNT+IDG+ K+  V+ A  L+ +M  + I+PDVVTY++LI G        
Sbjct: 201 GKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLK 260

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  LF +M+ + ++P V TFN+++D  CK G++ +A  +LD+M+ +D++PN  T++TL+
Sbjct: 261 DAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLV 320

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DGFC   K+   + +F  M   G K + V+Y  L++GYC  K+V +A  ++  M  +G+ 
Sbjct: 321 DGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVT 380

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
             V +YN +  G  +I +V+ A+KLF EM    +  D  TYN+ IDGLCK+G I  A +L
Sbjct: 381 ANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQL 440

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +       +I  YN +++             L   L  + +  ++ T  I+I GLC 
Sbjct: 441 VNEMHDRGQPPNIITYNSILNA------------LLTKLKDQGIQPNMHTDTILIKGLCQ 488

Query: 309 DGQMDKAHDLFLDM 322
            G+++ A  +F D+
Sbjct: 489 SGKLEAARKVFEDL 502



 Score =  193 bits (491), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 188/356 (52%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           +N I+  L K        +L  QM+ E INP+ VT+N LI+  C       A  +  +++
Sbjct: 71  FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL 130

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
             G +P ++T N  +   C  G++ +A    D +V      +  +Y TL++G C  G+  
Sbjct: 131 KMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 190

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A +L   ++    + + V YN +I+G  K+K V +A  LY EMV+K I P VVTY+ L 
Sbjct: 191 AALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALI 250

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            G F + +++ A+ LF +M  +++  D  T+N  +DG CK G + +A  +   + I   +
Sbjct: 251 RGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIK 310

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            ++  +N L+DG CK  +++    +F  + ++ +  +VVTY  ++ G C   Q++KA  +
Sbjct: 311 PNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKI 370

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           F  M +  V  NV  +  +I+GF +I K  K ++L  +M  K ++PD    + ++D
Sbjct: 371 FNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLID 426



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 192/353 (54%), Gaps = 12/353 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ +T NT I G C +G + +A     ++     + D V+Y +LI+GLC   +   A +
Sbjct: 135 EPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQ 194

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   +  + VQ + V +N ++D + K+  +++A  L   MV + + P+  TYS L+ GF 
Sbjct: 195 LLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFF 254

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + GK+  A +LF  M     K D  ++NIL++G+CK   +++A ++   M+ + IKP V 
Sbjct: 255 IVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVS 314

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL  G  +  +++    +F  M +  +  +  TY + +DG C    + +A ++F T+
Sbjct: 315 TFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTM 374

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++ +YN +I+G CK  +++ A++LF  +  + ++ DVVTYN +I GLC  G++
Sbjct: 375 SQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKI 434

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             A  L  +M +    PN+I + ++++             LL K+K++ + P+
Sbjct: 435 SYAFQLVNEMHDRGQPPNIITYNSILNA------------LLTKLKDQGIQPN 475



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 188/365 (51%), Gaps = 1/365 (0%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           ++ + N + Y++I         VD A +LF  +  +N       +N ++  L  +  ++ 
Sbjct: 28  ILLQKNFIPYSSISTTFHSND-VDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHT 86

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
              L  +M  +G+ P+ VTFN++++  C+ G +  A  +L  +++    P+  T +T + 
Sbjct: 87  VLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIK 146

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GFCL G+I++A      + ++G   D VSY  LING CK  E   AL L R +  K ++ 
Sbjct: 147 GFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQL 206

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             V YNT+  G+ +   V  A  L+ EM    ++ D  TY+  I G    G + +A++LF
Sbjct: 207 NAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLF 266

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             + +   + D+  +N L+DG CK GRL+ A  +   +  + +  +V T+N ++ G C D
Sbjct: 267 NKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKD 326

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            +M +   +F  M +  + PNV+ + +L+ G+  + + +K  ++ + M ++ V  +    
Sbjct: 327 RKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSY 386

Query: 370 SMVVD 374
           +++++
Sbjct: 387 NIMIN 391



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 108/196 (55%), Gaps = 23/196 (11%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN  T+NT++DG CK+  + + K +F  M  + I P+VVTY SL+ G C     N+AK+
Sbjct: 310 KPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKK 369

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  M  +GV  +V ++N++++  CK  K+D+A +L   M  + + P+  TY++L+DG C
Sbjct: 370 IFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLC 429

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYN-----------------------ILINGYCKN 169
            +GKI+ A +L   M   G   + ++YN                       ILI G C++
Sbjct: 430 KSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQPNMHTDTILIKGLCQS 489

Query: 170 KEVEEALSLYREMVSK 185
            ++E A  ++ +++ K
Sbjct: 490 GKLEAARKVFEDLLVK 505


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 189/362 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ +T+NT+I+ LCK+G V +AK +   +   +  P+  TY SLI G C  ++ + A  
Sbjct: 199 RPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFA 258

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  M+  G  P+ VT++ +++ LC  G+++EA  +L+ MVQ+ + P  +TY+  +   C
Sbjct: 259 MFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLC 318

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  + A EL G M+  GC  +  ++  LI+G  ++ + E A+ LY +M++ G+ PT V
Sbjct: 319 DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV 378

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L   L    + E A  +F+ M        T TYN  I   C  G I +A+ +F  +
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++  YN LI G CK G L  A+ L   +    L  D  TY  +I G    G++
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A  LF  M E+ ++PN + +  +I G+  + K    + L  KM E   +P +   +++
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558

Query: 373 VD 374
           + 
Sbjct: 559 IS 560



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 186/362 (51%), Gaps = 8/362 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T+  +I GL ++G  + A  L+ +M  + + P  VTYN+LI+ LC    +  A 
Sbjct: 338 CVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAF 397

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M+  G  PS  T+N I+   C  G + +A  + D M++    PN  TY+TL+ G+
Sbjct: 398 TIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY 457

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +N A  L   M+  G K D  +Y  LI+G+ +  ++E A SL+  M+  GI P  
Sbjct: 458 CKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY  +  G F + +V+ AL LF +M        + TYN  I G  K   I EA      
Sbjct: 518 VTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGK 577

Query: 252 L---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           +   G+L    ++  Y   IDGLC++GR  +A ++F  + +R    ++ TY+ +I+GLC 
Sbjct: 578 MVKQGLLP---NVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ 634

Query: 309 DGQMDKA--HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +G+ + A  ++L   +      PNV  + TL+ G     +  +  +L+  M++K + P  
Sbjct: 635 EGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSE 694

Query: 367 SI 368
            I
Sbjct: 695 EI 696



 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 183/347 (52%), Gaps = 4/347 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P TVTYN +I+ LC EG  + A  +F  M      P   TYN +I   C   D  +A  +
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVI 434

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+  G  P+V+T+N ++   CK G ++ A RLL++M    ++P+A+TY+ L+ GF  
Sbjct: 435 FDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSR 494

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A  LF  M   G   + V+Y  +I+GY    +V++AL+L+ +MV  G  P+  T
Sbjct: 495 GGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQT 554

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  G  + + +  A     +M +  +  +  TY +FIDGLC+NG    A ++F  + 
Sbjct: 555 YNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEME 614

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA---DVVTYNIMIHGLCNDG 310
                 ++  Y+ LI GLC+ GR E A E++  L R        +V TY  ++ GLC +G
Sbjct: 615 KRNYFPNLYTYSSLIYGLCQEGRAEDA-EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEG 673

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           +  +A  L + M++  + P+  I+  L+ G  +  K    + + + M
Sbjct: 674 RCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSM 720



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 183/363 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY ++I G C+   +D A A+F +M  +  +P+ VTY++LI+GLC      EA  +
Sbjct: 235 PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDM 294

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+ +G++P+V T+ + +  LC  G   EA  LL  M +R   PN  T++ L+ G   
Sbjct: 295 LEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSR 354

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK   A  L+  M + G     V+YN LIN  C     E A ++++ M+S G  P+  T
Sbjct: 355 DGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQT 414

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +      +  ++ A+ +F++M +   + +  TYNT I G CK G +  A+ L   + 
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK 474

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D   Y  LI G  + G+LE A  LF  +    +  + VTY  +I G  N  ++D
Sbjct: 475 GNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVD 534

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  LF  M E+   P+   +  +I GF + N  S+      KM ++ ++P+    +  +
Sbjct: 535 DALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFI 594

Query: 374 DLL 376
           D L
Sbjct: 595 DGL 597



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 181/362 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN+VTY+T+I+GLC EG +++A  +  +M  + I P V TY   +  LC A   +EA 
Sbjct: 268 CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAV 327

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +M  +G  P++ TF  ++  L ++GK + A  L   M+   + P   TY+ L++  
Sbjct: 328 ELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C+ G+   A  +F  M S G      +YN +I  +C   ++++A+ ++ +M+  G  P V
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV 447

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYNTL  G  +   + +A++L E M+ + +  D  TY   I G  + G +  A  LF  
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       +   Y  +IDG     +++ AL LF  +     +    TYN+MI G      
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + +A +    M +  + PNVI + + I G  R  +     ++ H+M+++   P+    S 
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627

Query: 372 VV 373
           ++
Sbjct: 628 LI 629



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 164/300 (54%), Gaps = 6/300 (2%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+ ++ +M++ G++PS++TFN +++ LCK G++ EA  ++  + + D  PNAFTY++L+ 
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C    ++ A  +F  M   GC  + V+Y+ LING C    +EEA+ +  EMV KGI+P
Sbjct: 246 GHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEP 305

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           TV TY    + L +      A++L  +M++     +  T+   I GL ++G    A+ L+
Sbjct: 306 TVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLY 365

Query: 250 RTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
             +   G++   +    YN LI+ LC  GR E A  +F+ +     +    TYN +I   
Sbjct: 366 HKMLADGLVPTTV---TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCF 422

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C  G + KA  +F  M +   +PNVI + TLI+G+ +    +  + LL  MK   + PDA
Sbjct: 423 CLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDA 482



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 185/366 (50%), Gaps = 4/366 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T TYN II   C  G + KA  +F +M     +P+V+TYN+LI+G C   + N A RL
Sbjct: 410 PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRL 469

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   G++P   T+  ++    + GK++ A+ L   M++  + PN  TY+ ++DG+  
Sbjct: 470 LEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFN 529

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K++ A  LF  M   G      +YN++I+G+ K   + EA +   +MV +G+ P V+T
Sbjct: 530 LAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVIT 589

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +   GL    +   A K+F EM++ +   +  TY++ I GLC+ G   E  E++  L 
Sbjct: 590 YTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGR-AEDAEMYNLLA 648

Query: 254 ILK---CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            L    CE ++  Y  L+ GLC  GR   A +L  S+ ++ L      Y  ++ G C + 
Sbjct: 649 RLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNL 708

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +++ A ++F  M+      ++  +  LI    + N   +   +   M EK    D  + +
Sbjct: 709 KVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWT 768

Query: 371 MVVDLL 376
           +++D L
Sbjct: 769 VLLDGL 774



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 170/349 (48%), Gaps = 2/349 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +TYNT+I G CK+G ++ A  L   MKG  + PD  TY  LI G         A  L
Sbjct: 445 PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSL 504

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F+ MM+ G+ P+ VT+  I+D      K+D+A  L   MV+    P++ TY+ ++ GF  
Sbjct: 505 FYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSK 564

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           T  I+ AE   G M   G   + ++Y   I+G C+N     A  ++ EM  +   P + T
Sbjct: 565 TNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT 624

Query: 194 YNTLFLGLFEIHQVEHA--LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           Y++L  GL +  + E A    L   +       +  TY T + GLC  G   EA +L  +
Sbjct: 625 YSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     +   + Y  L+ G CK+ ++E AL +F S+        +  Y  +I  LC +  
Sbjct: 685 MQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENF 744

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +++A  +F  M E     + +++  L+ G ++  +    ++LLH M+ +
Sbjct: 745 IEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESR 793



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/288 (33%), Positives = 140/288 (48%), Gaps = 2/288 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  IIDG      VD A ALF +M      P   TYN +I G    N  +EA+  
Sbjct: 515 PNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENF 574

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+ QG+ P+V+T+   +D LC+NG+   A ++   M +R+  PN +TYS+L+ G C 
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ 634

Query: 134 TGKINRAE--ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            G+   AE   L   +   GC+ +  +Y  L+ G C      EA  L   M  KG++P+ 
Sbjct: 635 EGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSE 694

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y  L +G  +  +VE AL +F  M         S Y   I  LCK  +I EA  +F+T
Sbjct: 695 EIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQT 754

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           +       D   +  L+DGL K G  ++ L+L   +  R    +  TY
Sbjct: 755 MLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 123/245 (50%), Gaps = 2/245 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK-- 71
           PN +TY + IDGLC+ G    A  +F +M+  N  P++ TY+SLI+GLC      +A+  
Sbjct: 585 PNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMY 644

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   +   G +P+V T+  ++  LC  G+  EA +L+  M ++ ++P+   Y  L+ G 
Sbjct: 645 NLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGE 704

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K+  A  +F SM+++G +     Y  LI   CK   +EEA  +++ M+ K      
Sbjct: 705 CKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDE 764

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V +  L  GL +  + +  LKL   M+  +   +  TY      L      ++  ++ + 
Sbjct: 765 VVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALDCAIKIPQISQQ 824

Query: 252 LGILK 256
           LGI+K
Sbjct: 825 LGIVK 829



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 121/246 (49%), Gaps = 7/246 (2%)

Query: 135 GKINRAEELFGSMESMGCKHDD----VSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           G++ R  +    + S   K+D      S+  L+    K   V+ A  +Y +M++ GI+P+
Sbjct: 145 GEVKRVTQFLSEINS---KYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPS 201

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           ++T+NT+   L +  +V+ A  +   + R D   +  TY + I G C+N  +  A  +F 
Sbjct: 202 LLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFD 261

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C+ +   Y+ LI+GLC  GRLE A+++   + ++ +   V TY I +  LC+ G
Sbjct: 262 RMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAG 321

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
              +A +L   M++    PN+  F  LI G  R  K    I L HKM    ++P     +
Sbjct: 322 CSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYN 381

Query: 371 MVVDLL 376
            +++ L
Sbjct: 382 ALINQL 387



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 73/151 (48%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN  TY T++ GLC EG   +A  L + M+ + + P    Y +L+ G C       A 
Sbjct: 655 CEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESAL 714

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F+ M   G Q  +  +  ++  LCK   ++EA  +   M+++    +   ++ L+DG 
Sbjct: 715 NIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGL 774

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
              G+ +   +L   MES  C  +  +Y +L
Sbjct: 775 LKEGETDLCLKLLHVMESRNCTLNFQTYVML 805


>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
 gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
           Japonica Group]
 gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
           Japonica Group]
 gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
 gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
          Length = 665

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 181/354 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+    N  +  LC    +  A  +  +M  +   PDVVTY +++  LC    ++EA 
Sbjct: 261 CFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAV 320

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L+ EM+ +G++P VV    ++  LCKN K+DEA  L   M+  D++ N   Y+ L+ GF
Sbjct: 321 GLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGF 380

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G I +A +    M+  GC+ D V+YNIL+N YC     ++A +L R+M   G+ P  
Sbjct: 381 WRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDR 440

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +YN L  GL + HQ++ A     +        D  + N  ID  C+   +  A+ LF+ 
Sbjct: 441 YSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKE 500

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +G    + D   Y  LI+GL   G   +A ELF  +    +V +V  YNIM+H LC  G 
Sbjct: 501 MGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGH 560

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
              A  +F  M +  V+P+ + F TLI+   + ++  + ++L  +M+ K V PD
Sbjct: 561 FKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPD 614



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 179/363 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY T++  LC      +A  L+ +M    + PDVV   +LI GLC     +EA  L
Sbjct: 298 PDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFEL 357

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+   +Q +V  +N ++    + G +++A + +  M +    P+  TY+ L++ +C 
Sbjct: 358 ASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCS 417

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  ++AE L   ME  G   D  SYNIL+ G CK  ++++A +   + +  G    +V+
Sbjct: 418 IGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVS 477

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            N L        +V  AL LF+EM    + AD  TY   I+GL   GY   A ELF  + 
Sbjct: 478 CNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQML 537

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K   ++  YN ++  LCK G  + A ++F  + ++ +  D VT+N +I+ L    +  
Sbjct: 538 NTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAV 597

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A DLF +M    V P+ + F  +I G +   K +   E+   M E  ++ D  +   ++
Sbjct: 598 EALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYMMENGIILDRDVSERLI 657

Query: 374 DLL 376
            +L
Sbjct: 658 SVL 660



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 167/315 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V    +I GLCK   VD+A  L  +M   +I  +V  YN+LI G   A    +A +
Sbjct: 332 KPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYK 391

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
               M   G +P VVT+N++++  C  G  D+A  L+  M    V P+ ++Y+ L+ G C
Sbjct: 392 TVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLC 451

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++++A         +G   D VS NILI+ +C+ K+V  AL+L++EM  KGI+   V
Sbjct: 452 KAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAV 511

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L  GLF I     A +LF++M    +  + + YN  +  LCK G+   A ++F  +
Sbjct: 512 TYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQM 571

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   D   +N LI  L KS R   AL+LF+ +  + +  D +T+  +I GL ++G+ 
Sbjct: 572 TQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKA 631

Query: 313 DKAHDLFLDMEENAV 327
             A++++  M EN +
Sbjct: 632 TLAYEIWEYMMENGI 646



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 176/402 (43%), Gaps = 39/402 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALF--LQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           C+   V YN  I  + K    D  +  +     KG  + P   TY+  I  LC +N    
Sbjct: 191 CREFGVDYNRFIGVMIKNCCFDLVEKYYNMALAKGFCLTP--FTYSRWITALCQSNRIEL 248

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
            + L  +M   G  P     N+ +  LC + ++ +A ++++ M  +   P+  TY+T++ 
Sbjct: 249 VEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVS 308

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             C   + + A  L+  M   G K D V+   LI G CKN++V+EA  L   M++  I+ 
Sbjct: 309 CLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQL 368

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V  YN L  G +    +E A K    MQR+    D  TYN  ++  C  G   +A  L 
Sbjct: 369 NVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLI 428

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLE------------------------------- 278
           R + +     D  +YN L+ GLCK+ +L+                               
Sbjct: 429 RKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRA 488

Query: 279 ----IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
                AL LF+ +  + + AD VTY I+I+GL   G  + A +LF  M    + PNV ++
Sbjct: 489 KKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVY 548

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             ++H   ++       ++  +M +K+V PD    + ++  L
Sbjct: 549 NIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWL 590



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 160/348 (45%), Gaps = 4/348 (1%)

Query: 31  FVDKAKALFLQMKGENINPDVVTYNSL----IHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           FVD   AL  +  G   +  V  + SL    + G   A  ++     F EM+  G +   
Sbjct: 136 FVDDNFALLSEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFG 195

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
           V +N  +  + KN   D   +  ++ + +      FTYS  +   C + +I   EEL   
Sbjct: 196 VDYNRFIGVMIKNCCFDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTD 255

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M+  GC  D  + NI ++  C +  + +AL +  +M  KG  P VVTY T+   L +  +
Sbjct: 256 MDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRR 315

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
              A+ L+EEM R  +  D       I GLCKN  + EA EL   +  L  +L++  YN 
Sbjct: 316 FSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNA 375

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LI G  ++G +E A +    + R     DVVTYNI+++  C+ G  DKA +L   ME + 
Sbjct: 376 LISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSG 435

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           V P+   +  L+ G  + ++  K    +    E     D    ++++D
Sbjct: 436 VNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILID 483



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/161 (19%), Positives = 60/161 (37%)

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
            ++   VA   S Y   + G  + G     +E F  +    C      YN  I  + K+ 
Sbjct: 150 RVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIKNC 209

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
             ++  + +     +       TY+  I  LC   +++   +L  DM++    P+     
Sbjct: 210 CFDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACN 269

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +H     N+    ++++ KM  K   PD    + VV  L
Sbjct: 270 IYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCL 310


>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
          Length = 665

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 181/354 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+    N  +  LC    +  A  +  +M  +   PDVVTY +++  LC    ++EA 
Sbjct: 261 CFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAV 320

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L+ EM+ +G++P VV    ++  LCKN K+DEA  L   M+  D++ N   Y+ L+ GF
Sbjct: 321 GLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGF 380

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G I +A +    M+  GC+ D V+YNIL+N YC     ++A +L R+M   G+ P  
Sbjct: 381 WRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDR 440

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +YN L  GL + HQ++ A     +        D  + N  ID  C+   +  A+ LF+ 
Sbjct: 441 YSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKE 500

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +G    + D   Y  LI+GL   G   +A ELF  +    +V +V  YNIM+H LC  G 
Sbjct: 501 MGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGH 560

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
              A  +F  M +  V+P+ + F TLI+   + ++  + ++L  +M+ K V PD
Sbjct: 561 FKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPD 614



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 179/363 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY T++  LC      +A  L+ +M    + PDVV   +LI GLC     +EA  L
Sbjct: 298 PDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFEL 357

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+   +Q +V  +N ++    + G +++A + +  M +    P+  TY+ L++ +C 
Sbjct: 358 ASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCS 417

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  ++AE L   ME  G   D  SYNIL+ G CK  ++++A +   + +  G    +V+
Sbjct: 418 IGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVS 477

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            N L        +V  AL LF+EM    + AD  TY   I+GL   GY   A ELF  + 
Sbjct: 478 CNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQML 537

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K   ++  YN ++  LCK G  + A ++F  + ++ +  D VT+N +I+ L    +  
Sbjct: 538 NTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAV 597

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A DLF +M    V P+ + F  +I G +   K +   E+   M E  ++ D  +   ++
Sbjct: 598 EALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYMMENGIILDRDVSERLI 657

Query: 374 DLL 376
            +L
Sbjct: 658 SVL 660



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 167/315 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V    +I GLCK   VD+A  L  +M   +I  +V  YN+LI G   A    +A +
Sbjct: 332 KPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYK 391

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
               M   G +P VVT+N++++  C  G  D+A  L+  M    V P+ ++Y+ L+ G C
Sbjct: 392 TVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLC 451

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              ++++A         +G   D VS NILI+ +C+ K+V  AL+L++EM  KGI+   V
Sbjct: 452 KAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAV 511

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L  GLF I     A +LF++M    +  + + YN  +  LCK G+   A ++F  +
Sbjct: 512 TYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQM 571

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +   D   +N LI  L KS R   AL+LF+ +  + +  D +T+  +I GL ++G+ 
Sbjct: 572 TQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKA 631

Query: 313 DKAHDLFLDMEENAV 327
             A++++  M EN +
Sbjct: 632 TLAYEIWEYMMENGI 646



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 161/348 (46%), Gaps = 4/348 (1%)

Query: 31  FVDKAKALFLQMKGENINPDVVTYNSL----IHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           FVD   AL L+  G   +  V  + SL    + G   A  ++     F EM+  G +   
Sbjct: 136 FVDDNFALLLEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFG 195

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
           V +N  +  + KN   D   +  ++ + +      FTYS  +   C + +I   EEL   
Sbjct: 196 VDYNRFIGVMIKNCCFDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTD 255

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M+  GC  D  + NI ++  C +  + +AL +  +M  KG  P VVTY T+   L +  +
Sbjct: 256 MDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRR 315

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
              A+ L+EEM R  +  D       I GLCKN  + EA EL   +  L  +L++  YN 
Sbjct: 316 FSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNA 375

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LI G  ++G +E A +    + R     DVVTYNI+++  C+ G  DKA +L   ME + 
Sbjct: 376 LISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSG 435

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           V P+   +  L+ G  + ++  K    +    E     D    ++++D
Sbjct: 436 VNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILID 483



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 176/402 (43%), Gaps = 39/402 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALF--LQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           C+   V YN  I  + K    D  +  +     KG  + P   TY+  I  LC +N    
Sbjct: 191 CREFGVDYNRFIGVMIKNCCFDLVEKYYNMALAKGFCLTP--FTYSRWITALCQSNRIEL 248

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
            + L  +M   G  P     N+ +  LC + ++ +A ++++ M  +   P+  TY+T++ 
Sbjct: 249 VEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVS 308

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             C   + + A  L+  M   G K D V+   LI G CKN++V+EA  L   M++  I+ 
Sbjct: 309 CLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQL 368

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V  YN L  G +    +E A K    MQR+    D  TYN  ++  C  G   +A  L 
Sbjct: 369 NVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLI 428

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLE------------------------------- 278
           R + +     D  +YN L+ GLCK+ +L+                               
Sbjct: 429 RKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRA 488

Query: 279 ----IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
                AL LF+ +  + + AD VTY I+I+GL   G  + A +LF  M    + PNV ++
Sbjct: 489 KKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVY 548

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             ++H   ++       ++  +M +K+V PD    + ++  L
Sbjct: 549 NIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWL 590



 Score = 42.0 bits (97), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 33/166 (19%), Positives = 62/166 (37%)

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           L+    ++   VA   S Y   + G  + G     +E F  +    C      YN  I  
Sbjct: 145 LEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGV 204

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           + K+   ++  + +     +       TY+  I  LC   +++   +L  DM++    P+
Sbjct: 205 MIKNCCFDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPD 264

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                  +H     N+    ++++ KM  K   PD    + VV  L
Sbjct: 265 FWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCL 310


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 189/362 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ +T+NT+I+ LCK+G V +AK +   +   +  P+  TY SLI G C  ++ + A  
Sbjct: 199 RPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFA 258

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  M+  G  P+ VT++ +++ LC  G+++EA  +L+ MVQ+ + P  +TY+  +   C
Sbjct: 259 MFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLC 318

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  + A EL G M+  GC  +  ++  LI+G  ++ + E A+ LY +M++ G+ PT V
Sbjct: 319 DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV 378

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L   L    + E A  +F+ M        T TYN  I   C  G I +A+ +F  +
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++  YN LI G CK G L  A+ L   +    L  D  TY  +I G    G++
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A  LF  M E+ ++PN + +  +I G+  + K    + L  KM E   +P +   +++
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558

Query: 373 VD 374
           + 
Sbjct: 559 IS 560



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 186/362 (51%), Gaps = 8/362 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T+  +I GL ++G  + A  L+ +M  + + P  VTYN+LI+ LC    +  A 
Sbjct: 338 CVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAF 397

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M+  G  PS  T+N I+   C  G + +A  + D M++    PN  TY+TL+ G+
Sbjct: 398 TIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY 457

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +N A  L   M+  G K D  +Y  LI+G+ +  ++E A SL+  M+  GI P  
Sbjct: 458 CKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY  +  G F + +V+ AL LF +M        + TYN  I G  K   I EA      
Sbjct: 518 VTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGK 577

Query: 252 L---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           +   G+L    ++  Y   IDGLC++GR  +A ++F  + +R    ++ TY+ +I+GLC 
Sbjct: 578 MVKQGLLP---NVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ 634

Query: 309 DGQMDKA--HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +G+ + A  ++L   +      PNV  + TL+ G     +  +  +L+  M++K + P  
Sbjct: 635 EGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSE 694

Query: 367 SI 368
            I
Sbjct: 695 EI 696



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 183/347 (52%), Gaps = 4/347 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P TVTYN +I+ LC EG  + A  +F  M      P   TYN +I   C   D  +A  +
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVI 434

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M+  G  P+V+T+N ++   CK G ++ A RLL++M    ++P+A+TY+ L+ GF  
Sbjct: 435 FDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSR 494

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A  LF  M   G   + V+Y  +I+GY    +V++AL+L+ +MV  G  P+  T
Sbjct: 495 GGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQT 554

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  G  + + +  A     +M +  +  +  TY +FIDGLC+NG    A ++F  + 
Sbjct: 555 YNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEME 614

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA---DVVTYNIMIHGLCNDG 310
                 ++  Y+ LI GLC+ GR E A E++  L R        +V TY  ++ GLC +G
Sbjct: 615 KRNYFPNLYTYSSLIYGLCQEGRAEDA-EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEG 673

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           +  +A  L + M++  + P+  I+  L+ G  +  K    + + + M
Sbjct: 674 RCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSM 720



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 183/363 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY ++I G C+   +D A A+F +M  +  +P+ VTY++LI+GLC      EA  +
Sbjct: 235 PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDM 294

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+ +G++P+V T+ + +  LC  G   EA  LL  M +R   PN  T++ L+ G   
Sbjct: 295 LEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSR 354

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK   A  L+  M + G     V+YN LIN  C     E A ++++ M+S G  P+  T
Sbjct: 355 DGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQT 414

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +      +  ++ A+ +F++M +   + +  TYNT I G CK G +  A+ L   + 
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK 474

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D   Y  LI G  + G+LE A  LF  +    +  + VTY  +I G  N  ++D
Sbjct: 475 GNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVD 534

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  LF  M E+   P+   +  +I GF + N  S+      KM ++ ++P+    +  +
Sbjct: 535 DALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFI 594

Query: 374 DLL 376
           D L
Sbjct: 595 DGL 597



 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 181/362 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN+VTY+T+I+GLC EG +++A  +  +M  + I P V TY   +  LC A   +EA 
Sbjct: 268 CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAV 327

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +M  +G  P++ TF  ++  L ++GK + A  L   M+   + P   TY+ L++  
Sbjct: 328 ELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C+ G+   A  +F  M S G      +YN +I  +C   ++++A+ ++ +M+  G  P V
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV 447

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYNTL  G  +   + +A++L E M+ + +  D  TY   I G  + G +  A  LF  
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       +   Y  +IDG     +++ AL LF  +     +    TYN+MI G      
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + +A +    M +  + PNVI + + I G  R  +     ++ H+M+++   P+    S 
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627

Query: 372 VV 373
           ++
Sbjct: 628 LI 629



 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 164/300 (54%), Gaps = 6/300 (2%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+ ++ +M++ G++PS++TFN +++ LCK G++ EA  ++  + + D  PNAFTY++L+ 
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C    ++ A  +F  M   GC  + V+Y+ LING C    +EEA+ +  EMV KGI+P
Sbjct: 246 GHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEP 305

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           TV TY    + L +      A++L  +M++     +  T+   I GL ++G    A+ L+
Sbjct: 306 TVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLY 365

Query: 250 RTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
             +   G++   +    YN LI+ LC  GR E A  +F+ +     +    TYN +I   
Sbjct: 366 HKMLADGLVPTTV---TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCF 422

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C  G + KA  +F  M +   +PNVI + TLI+G+ +    +  + LL  MK   + PDA
Sbjct: 423 CLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDA 482



 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 184/366 (50%), Gaps = 4/366 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T TYN II   C  G + KA  +F +M     +P+V+TYN+LI+G C   + N A RL
Sbjct: 410 PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRL 469

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   G++P   T+  ++    + GK++ A+ L   M++  + PN  TY+ ++DG+  
Sbjct: 470 LEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFN 529

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K++ A  LF  M   G      +YN++I+G+ K   + EA +   +MV +G+ P V+T
Sbjct: 530 LAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVIT 589

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +   GL    +   A K+F EM++ +   +  TY++ I GLC+ G   E  E++  L 
Sbjct: 590 YTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGR-AEDAEMYNLLA 648

Query: 254 ILK---CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            L    CE ++  Y  L+ GLC  GR   A +L  S+ ++ L      Y  ++ G C + 
Sbjct: 649 RLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNL 708

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +++ A ++F  M+      ++  +  LI    + N   +   +   M EK    D    +
Sbjct: 709 KVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWT 768

Query: 371 MVVDLL 376
           +++D L
Sbjct: 769 VLLDGL 774



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 169/349 (48%), Gaps = 2/349 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +TYNT+I G CK+G ++ A  L   MKG  + PD  TY  LI G         A  L
Sbjct: 445 PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSL 504

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F+ MM+ G+ P+ VT+  I+D      K+D+A  L   MV+    P++ TY+ ++ GF  
Sbjct: 505 FYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSK 564

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           T  I+ AE   G M   G   + ++Y   I+G C+N     A  ++ EM  +   P + T
Sbjct: 565 TNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT 624

Query: 194 YNTLFLGLFEIHQVEHA--LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           Y++L  GL +  + E A    L   +       +  TY T + GLC  G   EA +L  +
Sbjct: 625 YSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     +   + Y  L+ G CK+ ++E AL +F S+        +  Y  +I  LC +  
Sbjct: 685 MQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENF 744

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +++A  +F  M E     + + +  L+ G ++  +    ++LLH M+ +
Sbjct: 745 IEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESR 793



 Score =  157 bits (397), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 141/288 (48%), Gaps = 2/288 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  IIDG      VD A ALF +M      P   TYN +I G    N  +EA+  
Sbjct: 515 PNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENF 574

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+ QG+ P+V+T+   +D LC+NG+   A ++   M +R+  PN +TYS+L+ G C 
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ 634

Query: 134 TGKINRAE--ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            G+   AE   L   +   GC+ +  +Y  L+ G C      EA  L   M  KG++P+ 
Sbjct: 635 EGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSE 694

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y  L +G  +  +VE AL +F  M         S Y   I  LCK  +I EA  +F+T
Sbjct: 695 EIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQT 754

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           +       D  A+  L+DGL K G  ++ L+L   +  R    +  TY
Sbjct: 755 MLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 123/245 (50%), Gaps = 2/245 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK-- 71
           PN +TY + IDGLC+ G    A  +F +M+  N  P++ TY+SLI+GLC      +A+  
Sbjct: 585 PNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMY 644

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   +   G +P+V T+  ++  LC  G+  EA +L+  M ++ ++P+   Y  L+ G 
Sbjct: 645 NLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGE 704

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K+  A  +F SM+++G +     Y  LI   CK   +EEA  +++ M+ K      
Sbjct: 705 CKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDE 764

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V +  L  GL +  + +  LKL   M+  +   +  TY      L      ++  ++ + 
Sbjct: 765 VAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALDCAIKIPQISQQ 824

Query: 252 LGILK 256
           LGI+K
Sbjct: 825 LGIVK 829



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 121/246 (49%), Gaps = 7/246 (2%)

Query: 135 GKINRAEELFGSMESMGCKHDD----VSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           G++ R  +    + S   K+D      S+  L+    K   V+ A  +Y +M++ GI+P+
Sbjct: 145 GEVKRVTQFLSEINS---KYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPS 201

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           ++T+NT+   L +  +V+ A  +   + R D   +  TY + I G C+N  +  A  +F 
Sbjct: 202 LLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFD 261

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C+ +   Y+ LI+GLC  GRLE A+++   + ++ +   V TY I +  LC+ G
Sbjct: 262 RMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAG 321

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
              +A +L   M++    PN+  F  LI G  R  K    I L HKM    ++P     +
Sbjct: 322 CSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYN 381

Query: 371 MVVDLL 376
            +++ L
Sbjct: 382 ALINQL 387



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 73/151 (48%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN  TY T++ GLC EG   +A  L + M+ + + P    Y +L+ G C       A 
Sbjct: 655 CEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESAL 714

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F+ M   G Q  +  +  ++  LCK   ++EA  +   M+++    +   ++ L+DG 
Sbjct: 715 NIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGL 774

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
              G+ +   +L   MES  C  +  +Y +L
Sbjct: 775 LKEGETDLCLKLLHVMESRNCTLNFQTYVML 805


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 197/369 (53%), Gaps = 2/369 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G   KP++VTYN+ ++G CK G +  A+    +M G+ I P+V TY +L+ G        
Sbjct: 229 GCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLE 288

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A RL  E++++G+ P+ V +N I+  L   G M+ AS LL  M+ + + P+ FTYS ++
Sbjct: 289 NAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVI 348

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +G C  G +N A +    +  M    D  S+N++IN  C++  +  A  L   M  +G+ 
Sbjct: 349 EGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLV 408

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVT+ TL     +  +VE+A++++E+M +     +   YN+ I+G  K G    A+ L
Sbjct: 409 PDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILL 468

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
             TL  +    D+  YN LI G C  G+++ A  LF  +    ++A  VTYN +I+ LC 
Sbjct: 469 IDTLRRMGL-FDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCK 527

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD-AS 367
            G + +A +L   M    + P+ + +  LI  F +   P +VIEL   M  K V+PD  +
Sbjct: 528 AGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQT 587

Query: 368 IVSMVVDLL 376
             +MV+ LL
Sbjct: 588 YQTMVIPLL 596



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 185/337 (54%), Gaps = 13/337 (3%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G   +PN  TY T++DG  + G ++ A  L  ++  + + P+ V YNS+IH L    D 
Sbjct: 263 LGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDM 322

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A  L  +M+D+ + P   T++++++ LC+NG ++EA + L ++++  +  +AF+++ +
Sbjct: 323 EGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVV 382

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++  C +  +  A++L  +M   G   D V++  LI+ +CK+ +VE A+ +Y +M+  G 
Sbjct: 383 INYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGE 442

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP ++ YN++  G  +    + A+ L + ++R  +  D  TYNT I G C  G I +A  
Sbjct: 443 KPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGL-FDVVTYNTLIHGYCNCGKIDQAFA 501

Query: 248 LF---RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           LF   R  GIL   +    YN LI+ LCK+G +  A EL + +  R L+ D VTY I+I 
Sbjct: 502 LFSEMRNSGILASHV---TYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILIT 558

Query: 305 GL---CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
                C+  ++ + HD    M    V P+   + T++
Sbjct: 559 SFSKKCSPEEVIELHDY---MVLKGVVPDRQTYQTMV 592



 Score =  164 bits (414), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 180/345 (52%), Gaps = 3/345 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
            +N  +  L K   V++   ++ +M       +V T+N +I+ L       EA  + +  
Sbjct: 130 AWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRS 189

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRL---LDLMVQRDVRPNAFTYSTLMDGFCLT 134
           +  G+ P+VVTFN+I+D   K G MD A +L   +++M    V+P++ TY++ ++GFC  
Sbjct: 190 LKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKI 249

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +  AEE    M     + +  +Y  L++GY +   +E A  L  E+V KG+ P  V Y
Sbjct: 250 GNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIY 309

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N++   L     +E A  L  +M    +  D  TY+  I+GLC+NGY+ EA +  + +  
Sbjct: 310 NSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILE 369

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           +    D  ++N +I+ LC+S  L  A +L  ++  R LV DVVT+  +I   C DG+++ 
Sbjct: 370 MSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVEN 429

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           A  ++  M +    PN++I+ ++I+GF +       I L+  ++ 
Sbjct: 430 AIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRR 474



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 124/243 (51%), Gaps = 3/243 (1%)

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +NR  +++  M S G   +  ++N++I    K   + EA+S+    +  GI P VVT+N 
Sbjct: 144 VNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNM 203

Query: 197 LFLGLFEIHQVEHALKL---FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  G  ++  ++ ALKL    E M    V  D+ TYN+F++G CK G +  A E  + + 
Sbjct: 204 IIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEML 263

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             + E +++ Y  L+DG  + G LE A  L   L  + L+ + V YN +IH L  +G M+
Sbjct: 264 GKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDME 323

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L  DM +  + P+   +  +I G  R    ++  + L  + E  ++ DA   ++V+
Sbjct: 324 GASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVI 383

Query: 374 DLL 376
           + L
Sbjct: 384 NYL 386



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 102/195 (52%), Gaps = 1/195 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+ T+ID  CK+G V+ A  ++ +M      P+++ YNS+I+G      ++ A  L
Sbjct: 409 PDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILL 468

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              +   G+   VVT+N ++   C  GK+D+A  L   M    +  +  TY+TL++  C 
Sbjct: 469 IDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCK 527

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G + +A+EL   M   G   D V+Y ILI  + K    EE + L+  MV KG+ P   T
Sbjct: 528 AGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQT 587

Query: 194 YNTLFLGLFEIHQVE 208
           Y T+ + L +   VE
Sbjct: 588 YQTMVIPLLQEESVE 602


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/374 (31%), Positives = 187/374 (50%), Gaps = 2/374 (0%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN-INPDVVTYNSLIHGLCH 63
           +G I V  +P+ V YNT+IDGLCK G   +   L  +M+ +    PD +TYN LI G C 
Sbjct: 372 SGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCK 431

Query: 64  ANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
           A +  + K LF EM  +GV P+VVT N ++  +C+ G++  A        +R ++ +A T
Sbjct: 432 AGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVT 491

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           Y+ L++ FC      +A ELF  M   GC  D + Y  LI+G+ +   + +A  +  E+ 
Sbjct: 492 YTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELK 551

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
             GI+P  V YNTL  G    ++     ++ +EM+   +  DT TYNT I    KNG + 
Sbjct: 552 KLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLK 611

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA-DVVTYNIM 302
            A ++ R +        +  Y  +I+  C +G    A+E+F+ +     V  + V YNI+
Sbjct: 612 FAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNIL 671

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I+ LC + ++  A  L  DM+   V PN   +  +  G        KV E + +M E   
Sbjct: 672 INSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHAC 731

Query: 363 MPDASIVSMVVDLL 376
            PD   + ++ + L
Sbjct: 732 NPDYITMEILTEWL 745



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 186/370 (50%), Gaps = 10/370 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE--------NINPDVVTYNSLIHGLCHA 64
           +PN VT+  +I+ +CK   VD A  +  +M G         ++ PDVV YN+LI GLC  
Sbjct: 337 QPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKV 396

Query: 65  NDWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
               E   L   M  Q G  P  +T+N ++D  CK G++++   L D M +  V PN  T
Sbjct: 397 GRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVT 456

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
            +TL+ G C TG+++ A   F   +  G K D V+Y  LIN +C     E+A+ L+ EM+
Sbjct: 457 VNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEML 516

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
             G  P  + Y TL  G  +  ++  A  +  E+++  +  DT  YNT I G C+     
Sbjct: 517 KSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFH 576

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
              E+ + +     + D   YN LI    K+G L+ A ++ R + +  +V  V TY  +I
Sbjct: 577 RVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVI 636

Query: 304 HGLCNDGQMDKAHDLFLDME-ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           +  C +G  ++A ++F DM+  + V PN +I+  LI+   + NK    + L+  MK   V
Sbjct: 637 NAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGV 696

Query: 363 MPDASIVSMV 372
            P+ +  + +
Sbjct: 697 TPNTTTYNAI 706



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 190/382 (49%), Gaps = 19/382 (4%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE GV+   ++     +I  LC+    ++   LF +M       +    NSL+ GL    
Sbjct: 262 GEHGVLI--SSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREG 319

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM--------VQRDV 117
           ++N    L  +M++  +QP+VVTF ++++ +CK  ++D+A  +L+ M        +   V
Sbjct: 320 NFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSV 379

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESM----GCKHDDVSYNILINGYCKNKEVE 173
            P+   Y+TL+DG C   K+ R +E  G ME M    GC  D ++YN LI+G+CK  E+E
Sbjct: 380 EPDVVIYNTLIDGLC---KVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIE 436

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           +   L+ EM  +G+ P VVT NTL  G+    +V  A+  F E QR  +  D  TY   I
Sbjct: 437 KGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALI 496

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
           +  C      +A+ELF  +    C  D   Y  LI G  ++GR+  A  +   L +  + 
Sbjct: 497 NAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIR 556

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE- 352
            D V YN +I G C   +  +  ++  +MEE  + P+ I + TLI  +   N   K  + 
Sbjct: 557 PDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLI-AYASKNGDLKFAQK 615

Query: 353 LLHKMKEKKVMPDASIVSMVVD 374
           ++ KM +  V+P  +    V++
Sbjct: 616 VMRKMIKAGVVPTVATYGAVIN 637



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 158/339 (46%), Gaps = 36/339 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINP---------------------- 49
           C P+T+TYN +IDG CK G ++K K LF +M  E + P                      
Sbjct: 415 CAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAV 474

Query: 50  -------------DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
                        D VTY +LI+  C+ N++ +A  LF EM+  G  P  + +  ++   
Sbjct: 475 NFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGF 534

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
            + G+M +AS +L  + +  +RP+   Y+TL+ GFC T K +R  E+   ME  G K D 
Sbjct: 535 SQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDT 594

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           ++YN LI    KN +++ A  + R+M+  G+ PTV TY  +            A+++F++
Sbjct: 595 ITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKD 654

Query: 217 MQR-DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
           M+    V  +T  YN  I+ LCKN  +  AV L   + I     +   YN +  GL    
Sbjct: 655 MKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEK 714

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
            LE   E    +       D +T  I+   L   G++++
Sbjct: 715 DLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIER 753



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 155/308 (50%), Gaps = 9/308 (2%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +E   L  +  + GV  S      ++  LC+N K +    L   M++      +   ++L
Sbjct: 252 DEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSL 311

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM----- 182
           + G    G  NR  EL   M  M  + + V++ ILIN  CK + V++AL +  +M     
Sbjct: 312 LTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKE 371

Query: 183 ---VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ-RDDVAADTSTYNTFIDGLCK 238
              +S  ++P VV YNTL  GL ++ + +  L L E M+ +   A DT TYN  IDG CK
Sbjct: 372 SGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCK 431

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
            G I +  ELF  +       ++   N L+ G+C++GR+  A+  F    RR +  D VT
Sbjct: 432 AGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVT 491

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y  +I+  CN    +KA +LF +M ++  +P+ I++ TLI GF +  + +    +L ++K
Sbjct: 492 YTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELK 551

Query: 359 EKKVMPDA 366
           +  + PD 
Sbjct: 552 KLGIRPDT 559



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 151/328 (46%), Gaps = 26/328 (7%)

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD----VRPNAFTY 124
           E   + F  +D  V+ + +  NV +  L ++G++ +A +++D M + +     RPN  T 
Sbjct: 174 EESLILFNDLDPSVKNTYLR-NVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATG 232

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY---------CKNKEVEEA 175
             L   F    K  R EEL    E +        + +LI+ +         C+N++    
Sbjct: 233 DIL---FSFLLKRERNEELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRG 289

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
             L+ EM+  G        N+L  GL          +L E+M   D+  +  T+   I+ 
Sbjct: 290 WDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINH 349

Query: 236 LCKNGYIVEAVELFRTL-------GI-LKCELDIQAYNCLIDGLCKSGRLEIALELF-RS 286
           +CK   + +A+E+   +       GI +  E D+  YN LIDGLCK GR +  L L  R 
Sbjct: 350 MCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERM 409

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
             ++    D +TYN +I G C  G+++K  +LF +M +  VAPNV+   TL+ G  R  +
Sbjct: 410 RSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGR 469

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVD 374
            S  +    + + + +  DA   + +++
Sbjct: 470 VSSAVNFFVEAQRRGMKGDAVTYTALIN 497



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 3/141 (2%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN-INPDVVTYNSLIHGLCHANDW 67
           GVV  P   TY  +I+  C  G  ++A  +F  MK  + + P+ V YN LI+ LC  N  
Sbjct: 624 GVV--PTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKV 681

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A  L  +M   GV P+  T+N I   L     +++    +D M++    P+  T   L
Sbjct: 682 KSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEIL 741

Query: 128 MDGFCLTGKINRAEELFGSME 148
            +     G+I R ++     E
Sbjct: 742 TEWLSAVGEIERLKKFVAGCE 762


>gi|449468059|ref|XP_004151739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 225

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 99/201 (49%), Positives = 137/201 (68%)

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
           ++LY EM+  G +P   TY TL  GLF+  +V  A KLF  ++   ++AD+  Y  F+DG
Sbjct: 1   MNLYNEMLQVGKRPNATTYGTLLTGLFQTGKVGDAKKLFRVLKTYGISADSCIYRIFLDG 60

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           LCKNG + EA+E F  L     +LDI++YNCLIDGLCK+G+LE A ELF  L +  L +D
Sbjct: 61  LCKNGCLYEAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSD 120

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           VVTYNIMIHG C  GQ+DKA+ LF  MEEN   P++I + TL+ GF + NK  +V++LLH
Sbjct: 121 VVTYNIMIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLH 180

Query: 356 KMKEKKVMPDASIVSMVVDLL 376
           KM ++ + PDA   ++V+D+L
Sbjct: 181 KMIQRDMSPDAISCNIVIDML 201



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 117/212 (55%)

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
           L + M+Q   RPNA TY TL+ G   TGK+  A++LF  +++ G   D   Y I ++G C
Sbjct: 3   LYNEMLQVGKRPNATTYGTLLTGLFQTGKVGDAKKLFRVLKTYGISADSCIYRIFLDGLC 62

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           KN  + EA+  + ++ S  IK  + +YN L  GL +  ++E A +LFE++ ++ + +D  
Sbjct: 63  KNGCLYEAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVV 122

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           TYN  I G CK G + +A  LF  +    C  DI  YN L+ G C+S + +  ++L   +
Sbjct: 123 TYNIMIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKM 182

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
            +R +  D ++ NI+I  L  D +  +  DL 
Sbjct: 183 IQRDMSPDAISCNIVIDMLRKDEKYQECLDLL 214



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 111/201 (55%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P+  TY +L+ GL       +AK+LF  +   G+      + + +D LCKNG + EA   
Sbjct: 14  PNATTYGTLLTGLFQTGKVGDAKKLFRVLKTYGISADSCIYRIFLDGLCKNGCLYEAMEH 73

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
            + +   +++ +  +Y+ L+DG C  GK+  A ELF  +   G + D V+YNI+I+G+CK
Sbjct: 74  FNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVVTYNIMIHGFCK 133

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             +V++A  L+ +M   G  P ++TYNTL  G  + ++ +  +KL  +M + D++ D  +
Sbjct: 134 VGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKMIQRDMSPDAIS 193

Query: 229 YNTFIDGLCKNGYIVEAVELF 249
            N  ID L K+    E ++L 
Sbjct: 194 CNIVIDMLRKDEKYQECLDLL 214



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 109/202 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TY T++ GL + G V  AK LF  +K   I+ D   Y   + GLC      EA  
Sbjct: 13  RPNATTYGTLLTGLFQTGKVGDAKKLFRVLKTYGISADSCIYRIFLDGLCKNGCLYEAME 72

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F ++    ++  + ++N ++D LCK GK++ A  L + + Q  ++ +  TY+ ++ GFC
Sbjct: 73  HFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVVTYNIMIHGFC 132

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++++A  LF  ME  GC  D ++YN L+ G+C++ + +E + L  +M+ + + P  +
Sbjct: 133 KVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKMIQRDMSPDAI 192

Query: 193 TYNTLFLGLFEIHQVEHALKLF 214
           + N +   L +  + +  L L 
Sbjct: 193 SCNIVIDMLRKDEKYQECLDLL 214



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 114/217 (52%), Gaps = 3/217 (1%)

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L+ EM+  G +P+  T+  ++  L + GK+ +A +L  ++    +  ++  Y   +DG C
Sbjct: 3   LYNEMLQVGKRPNATTYGTLLTGLFQTGKVGDAKKLFRVLKTYGISADSCIYRIFLDGLC 62

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A E F  ++S   K D  SYN LI+G CK  ++E A  L+ ++  +G++  VV
Sbjct: 63  KNGCLYEAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVV 122

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN +  G  ++ QV+ A  LFE+M+ +    D  TYNT + G C++    E V+L   +
Sbjct: 123 TYNIMIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKM 182

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
                  D  + N +ID L K  + +  L+L   LPR
Sbjct: 183 IQRDMSPDAISCNIVIDMLRKDEKYQECLDL---LPR 216



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 63/106 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + + VTYN +I G CK G VDKA  LF +M+     PD++TYN+L+ G C +N  +E  +
Sbjct: 118 QSDVVTYNIMIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVK 177

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR 118
           L  +M+ + + P  ++ N+++D L K+ K  E   LL   + ++ R
Sbjct: 178 LLHKMIQRDMSPDAISCNIVIDMLRKDEKYQECLDLLPRFLVQERR 223



 Score = 37.7 bits (86), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 17/59 (28%), Positives = 31/59 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           C P+ +TYNT++ G C+    D+   L  +M   +++PD ++ N +I  L     + E 
Sbjct: 152 CTPDIITYNTLLCGFCQSNKSDEVVKLLHKMIQRDMSPDAISCNIVIDMLRKDEKYQEC 210


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 206/366 (56%), Gaps = 4/366 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  +Y T+I+G+ K G +  A  +F +M    + PDV+ YN +I G     D+ + K 
Sbjct: 181 KPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKE 240

Query: 73  LFFEMMDQG--VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           ++ E + +G  V P+VVT+NV+++ LCK G+ DE+  + + M + +   + FTYS+L+ G
Sbjct: 241 IW-ERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICG 299

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  G ++ A E++  M       D V+YN L+NG+C+  +++E+  L+  M+ K     
Sbjct: 300 LCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWV-MMGKENCHN 358

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VV+YN    GLFE  +VE A+ ++E ++R    AD++TY   I GLCKNG++ +A+++ +
Sbjct: 359 VVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILK 418

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
                  +LD  AY+ ++DGL K GR++ AL +   + +          N +I+G     
Sbjct: 419 EAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRAS 478

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++++A   F +ME    +P V+ + TLI+G  +  + S     + +M EK   PD    S
Sbjct: 479 KLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYS 538

Query: 371 MVVDLL 376
           +++D L
Sbjct: 539 LLMDGL 544



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 188/349 (53%), Gaps = 1/349 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TYN +++G C+ G + ++  L++ M  EN + +VV+YN  I GL       EA  ++  +
Sbjct: 327 TYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVWELL 385

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
             +G      T+ V++  LCKNG +++A ++L        + +AF YS+++DG    G++
Sbjct: 386 RRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRV 445

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  +   M+  GC+      N LING+ +  ++EEA+  +REM +KG  PTVV+YNTL
Sbjct: 446 DEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTL 505

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL +  +   A    +EM   D   D  TY+  +DGLC+   I  A+ L+R + +   
Sbjct: 506 INGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGL 565

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           E D+  +N L+ GLC +G++E AL L+ ++ +   + ++VT+N ++ GL    + + A  
Sbjct: 566 EPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASV 625

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           ++  M +N   P++I +   + G     + S  I L     +  ++P +
Sbjct: 626 IWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTS 674



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 194/395 (49%), Gaps = 39/395 (9%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHAN 65
           E G+V  P+ + YN +IDG  K G   + K ++ ++ KG  + P+VVTYN +I+GLC   
Sbjct: 212 ERGLV--PDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMG 269

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            ++E+  ++  M     +  + T++ ++  LC  G +D A  +   MV+R V  +  TY+
Sbjct: 270 RFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYN 329

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L++GFC  GKI  + EL+  M    C H+ VSYNI I G  +N++VEEA+S++  +  +
Sbjct: 330 ALLNGFCRAGKIKESFELWVMMGKENC-HNVVSYNIFIRGLFENRKVEEAISVWELLRRR 388

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G      TY  L  GL +   +  ALK+ +E +      D   Y++ +DGL K G + EA
Sbjct: 389 GSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEA 448

Query: 246 VEL-----------------------------------FRTLGILKCELDIQAYNCLIDG 270
           + +                                   FR +    C   + +YN LI+G
Sbjct: 449 LGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLING 508

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LCK+ R   A    + +  +    D++TY++++ GLC   ++D A +L+  +    + P+
Sbjct: 509 LCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPD 568

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           V +   L+HG     K    + L   MK+   +P+
Sbjct: 569 VTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPN 603



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 173/330 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V+YN  I GL +   V++A +++  ++      D  TY  LIHGLC     N+A ++ 
Sbjct: 358 NVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKIL 417

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            E  D G +     ++ I+D L K G++DEA  ++  M +     +    + L++GF   
Sbjct: 418 KEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRA 477

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            K+  A   F  ME+ GC    VSYN LING CK +   +A S  +EM+ K  KP ++TY
Sbjct: 478 SKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITY 537

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + L  GL +  +++ AL L+ ++    +  D + +N  + GLC  G I +A+ L+  +  
Sbjct: 538 SLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQ 597

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C  ++  +N L+DGL K+   E+A  ++  + +     D+++YNI + GLC+ G++  
Sbjct: 598 SNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISD 657

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
              LF D  +N + P  I +  L+   +++
Sbjct: 658 GIALFDDALKNGILPTSITWYILVRAVLKL 687



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 194/369 (52%), Gaps = 7/369 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENI---NPDVVTYNSLIHGLCHANDWN 68
           CK       T++    K    ++A   F +M  E I    P + +YN+L++    AN   
Sbjct: 74  CKCTEDVVLTVLKAYAKSKMPNEALDCFQKM--EEIFGCKPGIRSYNALLNAFIEANLLE 131

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A+         G+ P++ T+N+++    K  +  EA  LLD M  +D++P+ ++Y T++
Sbjct: 132 KAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVI 191

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-I 187
           +G   +G +  A E+F  M   G   D + YNI+I+G+ K  +  +   ++  +V    +
Sbjct: 192 NGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCV 251

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P VVTYN +  GL ++ + + +L+++E M++++   D  TY++ I GLC  G +  AVE
Sbjct: 252 YPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVE 311

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +++ +      +D+  YN L++G C++G+++ + EL+  + +     +VV+YNI I GL 
Sbjct: 312 VYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKEN-CHNVVSYNIFIRGLF 370

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            + ++++A  ++  +       +   +  LIHG  +    +K +++L + K+     DA 
Sbjct: 371 ENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAF 430

Query: 368 IVSMVVDLL 376
             S +VD L
Sbjct: 431 AYSSIVDGL 439



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 127/229 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ +    N +I+G  +   +++A   F +M+ +  +P VV+YN+LI+GLC A  +++A 
Sbjct: 460 CELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAY 519

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
               EM+++  +P ++T++++MD LC+  K+D A  L   ++ + + P+   ++ LM G 
Sbjct: 520 SFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGL 579

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GKI  A  L+ +M+   C  + V++N L++G  K +E E A  ++  M   G +P +
Sbjct: 580 CSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDI 639

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           ++YN    GL    ++   + LF++  ++ +   + T+   +  + K G
Sbjct: 640 ISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLG 688



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 108/216 (50%), Gaps = 4/216 (1%)

Query: 147 MESMGCK-HDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEI 204
           +++  CK  +DV   +L   Y K+K   EAL  +++M    G KP + +YN L     E 
Sbjct: 69  IKTQKCKCTEDVVLTVL-KAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEA 127

Query: 205 HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
           + +E A       +   +  +  TYN  I    K    VEA  L   +     + D+ +Y
Sbjct: 128 NLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSY 187

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
             +I+G+ KSG L  ALE+F  +  R LV DV+ YNIMI G    G   +  +++  + +
Sbjct: 188 GTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVK 247

Query: 325 NA-VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
            + V PNV+ +  +I+G  ++ +  + +E+  +MK+
Sbjct: 248 GSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKK 283



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 67/126 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+   +N ++ GLC  G ++ A  L+  MK  N  P++VT+N+L+ GL  A +   A  
Sbjct: 566 EPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASV 625

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++  M   G QP ++++N+ +  LC  G++ +   L D  ++  + P + T+  L+    
Sbjct: 626 IWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVL 685

Query: 133 LTGKIN 138
             G ++
Sbjct: 686 KLGPLD 691



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 52/95 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VT+NT++DGL K    + A  ++  M      PD+++YN  + GLC     ++  
Sbjct: 600 CLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGI 659

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
            LF + +  G+ P+ +T+ +++  + K G +D  S
Sbjct: 660 ALFDDALKNGILPTSITWYILVRAVLKLGPLDSLS 694


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 178/347 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN +TYN ++ GLC+ G + +  AL  +M  + + PD  TY+ L  GL    D      
Sbjct: 82  KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 141

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF + +  GV     T +++++ LCK+GK+  A  +L  +V   + P    Y+TL++G+C
Sbjct: 142 LFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYC 201

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            TG++  A   FG M+S   K D ++YN LING CK + +  A  L  EM   G+ PTV 
Sbjct: 202 QTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVE 261

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL        Q+E    +  EMQ + +  +  +Y + ++  CKNG I EAV +   +
Sbjct: 262 TFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM 321

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  + Q YN +ID   + G  + A  L   +    +   +VTYN++I GLCN  Q+
Sbjct: 322 FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQI 381

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
            +A ++   +  + + P+ + + TLI          K ++L  +M +
Sbjct: 382 SEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHK 428



 Score =  197 bits (500), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 182/357 (50%), Gaps = 2/357 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  +YN +I G+ + G    A  +F +M    + P+ +TYN++I G     D     RL
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+  G++P+ +T+NV++  LC+ G+M E S LLD M  + + P+ FTYS L DG   
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G       LFG     G    D + +IL+NG CK+ +V  A  + + +V+ G+ PT V 
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G  +  ++E A   F +M+   +  D  TYN  I+GLCK   I  A +L   + 
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  ++ +N LID   ++G+LE    +   +    L  +VV+Y  +++  C +G++ 
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 312

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +A  +  DM    V PN  ++  +I  +V      +   L+ KMK   + P  SIV+
Sbjct: 313 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP--SIVT 367



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 177/344 (51%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T + +++GLCK+G V  A+ +   +    + P  V YN+LI+G C   +   A   F +M
Sbjct: 157 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 216

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
             + ++P  +T+N +++ LCK  ++  A  LL  M    V P   T++TL+D +  TG++
Sbjct: 217 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 276

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
            +   +   M+  G K + VSY  ++N +CKN ++ EA+++  +M  K + P    YN +
Sbjct: 277 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 336

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
                E    + A  L E+M+ + ++    TYN  I GLC    I EA E+  +L   + 
Sbjct: 337 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRL 396

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D  +YN LI   C  G ++ AL+L + + +  + + V TY+ +I GL   G++++   
Sbjct: 397 IPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEY 456

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           L+  M +N V P+  I   ++  + +     K  +L  +M +K+
Sbjct: 457 LYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 500



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 157/299 (52%), Gaps = 6/299 (2%)

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           D    P+  ++NV++  + + G+  +A  + D M +R V PN  TY+T++DG    G + 
Sbjct: 8   DGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLE 67

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
               L   M   G K + ++YN+L++G C+   + E  +L  EM S+ + P   TY+ LF
Sbjct: 68  AGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILF 127

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GIL 255
            GL      +  L LF +  ++ V     T +  ++GLCK+G +  A E+ ++L   G++
Sbjct: 128 DGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV 187

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
              +    YN LI+G C++G LE A   F  +  R +  D +TYN +I+GLC   ++  A
Sbjct: 188 PTRV---IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNA 244

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            DL ++M++N V P V  F TLI  + R  +  K   +L +M+E  + P+      +V+
Sbjct: 245 QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 303



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 140/273 (51%), Gaps = 1/273 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ +TYN +I+GLCK   +  A+ L ++M+   +NP V T+N+LI          +   
Sbjct: 222 KPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFI 281

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM + G++P+VV++  I++  CKNGK+ EA  +LD M  +DV PNA  Y+ ++D + 
Sbjct: 282 VLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYV 341

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  ++A  L   M+S G     V+YN+LI G C   ++ EA  +   + +  + P  V
Sbjct: 342 EHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAV 401

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNTL         ++ AL L + M +  + +   TY+  I GL   G + E   L++ +
Sbjct: 402 SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKM 461

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
                      +N +++   K G  EI  E  R
Sbjct: 462 MQNNVVPSNAIHNIMVEAYSKYGN-EIKAEDLR 493



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 86/172 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   YN IID   + G  D+A  L  +MK   I+P +VTYN LI GLC+ +  +EA+ +
Sbjct: 328 PNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEI 387

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              + +  + P  V++N ++   C  G +D+A  L   M +  ++    TY  L+ G   
Sbjct: 388 INSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGG 447

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            G++N  E L+  M        +  +NI++  Y K     +A  L +EM+ K
Sbjct: 448 AGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 499



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 76/145 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ VTYN +I GLC +  + +A+ +   +    + PD V+YN+LI   C+  + ++A  
Sbjct: 362 SPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 421

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M   G++ +V T++ ++  L   G+++E   L   M+Q +V P+   ++ +++ + 
Sbjct: 422 LQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYS 481

Query: 133 LTGKINRAEELFGSMESMGCKHDDV 157
             G   +AE+L   M      HDD 
Sbjct: 482 KYGNEIKAEDLRKEMLQKRNNHDDT 506


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/357 (33%), Positives = 181/357 (50%), Gaps = 2/357 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN-INPDVVTYNSLIHGLCHANDWNEAK 71
           +PN VTYNT+I G C  G V  A  +  +M+    I P+  TY ++I G C     +EA 
Sbjct: 69  RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 128

Query: 72  RLFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           ++F EM+ +G V+P  V +N ++   C  GK+D A    D MV+R V     TY+ L+  
Sbjct: 129 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 188

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
             + G+   A EL   M   G   D  +YNILING+CK   V++AL ++  M  +G++ T
Sbjct: 189 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 248

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY +L   L +  QV+   KLF+E  R  +  D   YN  I+    +G I  A E+  
Sbjct: 249 VVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 308

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +   +   D   YN L+ GLC  GR++ A +L   + +R +  D+VTYN +I G    G
Sbjct: 309 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKG 368

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            +  A  +  +M      P ++ +  LI G  +  +      ++ +M E  + PD S
Sbjct: 369 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDS 425



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 176/351 (50%), Gaps = 6/351 (1%)

Query: 16  TVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFF 75
           T T+N ++  LC  G   +A  L  QM      P+ VTYN++I G C       A  +  
Sbjct: 41  TTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMR 96

Query: 76  EMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR-DVRPNAFTYSTLMDGFCL 133
           EM ++ G+ P+  T+  ++   CK G++DEA ++ D M+ + +V+P A  Y+ L+ G+C 
Sbjct: 97  EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 156

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A      M   G      +YN+L++    +    EA  L  EM  KG+ P V T
Sbjct: 157 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 216

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +   V+ AL++FE M R  V A   TY + I  L K G + E  +LF    
Sbjct: 217 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAV 276

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+  YN LI+    SG ++ A E+   + ++ +  D VTYN ++ GLC  G++D
Sbjct: 277 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 336

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           +A  L  +M +  + P+++ + TLI G+         + + ++M  K   P
Sbjct: 337 EARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 387



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 166/310 (53%), Gaps = 6/310 (1%)

Query: 58  IHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV 117
           +H L  A     A  LF +M    +     TFN+++  LC  GK    +R L+L+ Q   
Sbjct: 13  LHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGK---PARALELLRQMP- 68

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           RPNA TY+T++ GFC  G++  A ++   M E  G   +  +Y  +I+G+CK   V+EA+
Sbjct: 69  RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 128

Query: 177 SLYREMVSKG-IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
            ++ EM++KG +KP  V YN L  G  +  +++ AL   + M    VA   +TYN  +  
Sbjct: 129 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 188

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           L  +G   EA EL   +G      D+  YN LI+G CK G ++ ALE+F ++ RR + A 
Sbjct: 189 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 248

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           VVTY  +I+ L   GQ+ +   LF +     + P+++++  LI+         +  E++ 
Sbjct: 249 VVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 308

Query: 356 KMKEKKVMPD 365
           +M++K++ PD
Sbjct: 309 EMEKKRIAPD 318



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 131/223 (58%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN +I+G CKEG V KA  +F  M    +   VVTY SLI+ L       E  +L
Sbjct: 212 PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKL 271

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E + +G++P +V +N +++    +G +D A  ++  M ++ + P+  TY+TLM G CL
Sbjct: 272 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 331

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A +L   M   G + D V+YN LI+GY    +V++AL +  EM++KG  PT++T
Sbjct: 332 LGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 391

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           YN L  GL +  Q + A  + +EM  + +  D STY + I+GL
Sbjct: 392 YNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 86/159 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V YN +I+     G +D+A  +  +M+ + I PD VTYN+L+ GLC     +EA++
Sbjct: 281 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARK 340

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  +G+QP +VT+N ++      G + +A R+ + M+ +   P   TY+ L+ G C
Sbjct: 341 LIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 400

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
             G+ + AE +   M   G   DD +Y  LI G     E
Sbjct: 401 KNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 439



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 6/169 (3%)

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           A  LF +M R  +   T+T+N  +  LC  G    A+EL R +       +   YN +I 
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIA 80

Query: 270 GLCKSGRLEIALELFRSLPRRVLVA-DVVTYNIMIHGLCNDGQMDKAHDLFLDM-EENAV 327
           G C  GR++ AL++ R +  R  +A +  TY  +I G C  G++D+A  +F +M  +  V
Sbjct: 81  GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            P  +++  LI G+    K    +    +M E+ V    +  +++V  L
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 189


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 105/279 (37%), Positives = 169/279 (60%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + + N V YNT+I G+CK+  V+ A  L+ +M  + I+P+VVTY++LI G        
Sbjct: 70  GKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLK 129

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  LF +++ + ++P   TFN+++D  CK+ KM E   +  +M+++ + P+  TY++L+
Sbjct: 130 DAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLV 189

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG+ L  ++N A+ +F +M   G   D  SYNILING+CK K+V++A++L+ EM  K I 
Sbjct: 190 DGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNII 249

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTYN+L  GL +  ++ +AL+L ++M    V  +  TYN+ ID L K   + +A+ L
Sbjct: 250 PNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIAL 309

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
                    +  +  Y  LIDGLCK GRL+ A  +F  L
Sbjct: 310 ITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 183/330 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNT+T NT+I GLC +G + +A     ++     + D V+Y +LIHGLC   +   A  L
Sbjct: 5   PNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDL 64

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              +  + VQ + V +N ++  +CK+  +++A  L   MV + + PN  TYS L+ GF +
Sbjct: 65  LQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV 124

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A +LF  +     K D  ++NIL++G+CK+++++E  +++  M+ +GI P VVT
Sbjct: 125 VGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVT 184

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L  G   + +V  A  +F  M +  V  D  +YN  I+G CK   + +A+ LF  + 
Sbjct: 185 YNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMH 244

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 ++  YN LIDGL KSGR+  AL+L   +  R +  +++TYN +I  L    Q+D
Sbjct: 245 CKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVD 304

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           KA  L    ++  + P++  +  LI G  +
Sbjct: 305 KAIALITKFKDQGIQPSMYTYTILIDGLCK 334



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 175/308 (56%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + V+Y T+I GLCK G    A  L  ++ G+ +  + V YN++I+G+C     N+A  L+
Sbjct: 41  DQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLY 100

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ +G+ P+VVT++ ++      GK+ +A  L + ++  +++P+ +T++ L+DGFC  
Sbjct: 101 SEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKD 160

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            K+   + +F  M   G   D V+YN L++GY   KEV  A S++  M   G+ P + +Y
Sbjct: 161 RKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSY 220

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L  G  +I +V+ A+ LF EM   ++  +  TYN+ IDGL K+G I  A++L   +  
Sbjct: 221 NILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHD 280

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                +I  YN +ID L K+ +++ A+ L      + +   + TY I+I GLC  G++  
Sbjct: 281 RGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKD 340

Query: 315 AHDLFLDM 322
           A ++F D+
Sbjct: 341 ARNIFEDL 348



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 160/296 (54%)

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           G  P+ +T N ++  LC  G++ +A    D +V      +  +Y TL+ G C  G+   A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
            +L   ++    + + V YN +I G CK+K V +A  LY EMVSKGI P VVTY+ L  G
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
            F + +++ A+ LF ++  +++  D  T+N  +DG CK+  + E   +F  +       D
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           +  YN L+DG      +  A  +F ++ +  +  D+ +YNI+I+G C   ++DKA +LF 
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 241

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +M    + PNV+ + +LI G  +  + S  ++L+ +M ++ V P+    + ++D L
Sbjct: 242 EMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDAL 297



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 115/225 (51%)

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
           MG   + ++ N LI G C   ++ +A   + ++V+ G     V+Y TL  GL ++ +   
Sbjct: 1   MGYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRA 60

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           AL L + +    V  +   YNT I G+CK+ ++ +A +L+  +       ++  Y+ LI 
Sbjct: 61  ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 120

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           G    G+L+ A++LF  +    +  D  T+NI++ G C D +M +   +F  M +  + P
Sbjct: 121 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP 180

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +V+ + +L+ G+  + + +    + + M +  V PD    +++++
Sbjct: 181 DVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILIN 225


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 191/360 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +Y+ +IDG C++G VD+A  +F +M+   I P++ +Y+ LI G C     ++A  +
Sbjct: 313 PDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEV 372

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM + G+ P V ++++++D  C+ G MD A +  + M   +  P+AF Y +L+ G+  
Sbjct: 373 FEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYK 432

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           + +   A + F  M+ +G   D ++ N +++ YC+  +  +AL+L  +    G+     +
Sbjct: 433 SKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYS 492

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN     +      E AL+L   M + +V  D   Y+T I    K     +AV LF  + 
Sbjct: 493 YNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMT 552

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +    +++ Y  LI+      ++++A  LF+ +    +  D + Y  ++ G CN G+M 
Sbjct: 553 KVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMT 612

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  LF +M     +PNV+ +   I+ ++++NK ++  +L  KMKE+ V PD  + +M++
Sbjct: 613 RARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLI 672



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 177/383 (46%), Gaps = 36/383 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  +Y+ +IDG CKEG VDKA  +F +MK   I PDV +Y+ LI G C   D + A + 
Sbjct: 348 PNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKF 407

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + EM      PS   +  ++    K+ +   A +   +M +  + P+    + ++  +C 
Sbjct: 408 WEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCR 467

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
               N+A  L    +  G   +  SYN  I+  C+    E+AL L   M+ + + P VV 
Sbjct: 468 KPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVN 527

Query: 194 YNT----------------LFLGLFEIH-------------------QVEHALKLFEEMQ 218
           Y+T                LF+ + ++                    +++ A +LF+ M+
Sbjct: 528 YSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMK 587

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              V  D   Y + + G C  G +  A  LF  +    C  ++  Y C I+   K  +  
Sbjct: 588 ESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNN 647

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM-EENAVAPNVIIFVTL 337
            A +L+  +  R +  D + Y ++I   CN G+M++A  LF +M +E    PNV+++  L
Sbjct: 648 QAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCL 707

Query: 338 IHGFVRINKPSKVIELLHKMKEK 360
           I+ ++++NK  +  +L  +M+ K
Sbjct: 708 INSYIKLNKRDQAEKLYEEMRAK 730



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 182/370 (49%), Gaps = 8/370 (2%)

Query: 13  KPNTVTYNTIIDGLCK----EGFVDKAKALF--LQMKGENINPDVVTYNSLIHGLCHAND 66
           +PN  TY  +++  C+       + +A  +   + M GE   P+VVTY + I GLC    
Sbjct: 203 RPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGET--PNVVTYGTYIKGLCKVGL 260

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           +  A RL   +  +    +   FN ++  LC+ G +DEAS +   M    + P+ ++YS 
Sbjct: 261 FGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSI 320

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+DGFC  G++++A E+F  M + G   +  SY+ILI+G+CK   V++AL ++ EM + G
Sbjct: 321 LIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSG 380

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I P V +Y+ L  G      ++ A+K +EEM  ++ +     Y + I G  K+     A+
Sbjct: 381 ILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANAL 440

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           + FR +  L    D  A N ++   C+      AL L        +  +  +YN  IH +
Sbjct: 441 KEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRI 500

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C     +KA  L   M +  V P+V+ + TLI  F +     K + L  KM +  +  + 
Sbjct: 501 CRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNV 560

Query: 367 SIVSMVVDLL 376
              +++++L 
Sbjct: 561 KTYTILINLF 570



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 163/322 (50%), Gaps = 10/322 (3%)

Query: 52  VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL 111
           V ++ LI      +    A  +F    D G++ ++++ N ++  L ++ ++D    L ++
Sbjct: 137 VVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEV 196

Query: 112 MVQRDVRPNAFTYSTLMDGFC----LTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
           +++   RPN  TY+ +M+ FC     +  I RA E+ G +   G   + V+Y   I G C
Sbjct: 197 LIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLC 256

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           K      A  L + +  K        +N +  GL +   ++ A ++F+EM+   +  D  
Sbjct: 257 KVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVY 316

Query: 228 TYNTFIDGLCKNGYIVEAVELF---RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           +Y+  IDG C+ G + +A E+F   R  GIL    +I +Y+ LIDG CK GR++ ALE+F
Sbjct: 317 SYSILIDGFCRKGRVDQASEVFKEMRNSGILP---NIYSYSILIDGFCKEGRVDKALEVF 373

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
             +    ++ DV +Y+I+I G C  G MD A   + +M  N  +P+   + +LI G+ + 
Sbjct: 374 EEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKS 433

Query: 345 NKPSKVIELLHKMKEKKVMPDA 366
            + +  ++    M++  + PD 
Sbjct: 434 KQFANALKEFRIMQKLGMWPDT 455



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 182/399 (45%), Gaps = 39/399 (9%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + V ++ +I        ++ A  +F++ K + I  ++++ N L+  L   N  +  + LF
Sbjct: 135 SNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLF 194

Query: 75  FEMMDQGVQPSVVTFNVIMDELCK----NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             ++  G +P++ T+ ++M+  C+    +  +  AS +L  +      PN  TY T + G
Sbjct: 195 EVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKG 254

Query: 131 FCLTGK-----------------------------------INRAEELFGSMESMGCKHD 155
            C  G                                    ++ A E+F  M++ G   D
Sbjct: 255 LCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPD 314

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
             SY+ILI+G+C+   V++A  +++EM + GI P + +Y+ L  G  +  +V+ AL++FE
Sbjct: 315 VYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFE 374

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
           EM+   +  D  +Y+  IDG C+ G +  A++ +  +           Y  LI G  KS 
Sbjct: 375 EMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSK 434

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           +   AL+ FR + +  +  D +  N ++   C     +KA  L    +EN V  N   + 
Sbjct: 435 QFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYN 494

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             IH   R + P K ++LL  M ++ V+PD    S ++ 
Sbjct: 495 EFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLIS 533



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 65/174 (37%), Positives = 97/174 (55%), Gaps = 1/174 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  TY  +I+    +  +D A  LF  MK   + PD + Y SL+ G C+  +   A+ LF
Sbjct: 559 NVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALF 618

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM  +G  P+VVT+   ++E  K  K ++A +L + M +R V P+   Y+ L+  FC T
Sbjct: 619 DEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNT 678

Query: 135 GKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           G++NRAE LF  M+  G C  + V Y  LIN Y K  + ++A  LY EM +KG+
Sbjct: 679 GEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGL 732



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 116/261 (44%), Gaps = 40/261 (15%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR-- 72
           N  +YN  I  +C+    +KA  L   M   N+ PDVV Y++LI   C A   N  K   
Sbjct: 489 NPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLIS--CFAKRLNSEKAVM 546

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF +M   G+  +V T+ ++++    + KMD A RL   M +  V P+   Y++L+ GFC
Sbjct: 547 LFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFC 606

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI----- 187
            TG++ RA  LF  M   GC  + V+Y   IN Y K  +  +A  LY +M  +G+     
Sbjct: 607 NTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQI 666

Query: 188 -------------------------------KPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
                                           P VV Y  L     ++++ + A KL+EE
Sbjct: 667 LYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEE 726

Query: 217 MQRDDVAADTSTYNTFIDGLC 237
           M+   ++   S+  +  +  C
Sbjct: 727 MRAKGLSRLCSSEGSVSESWC 747



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 1/135 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY   I+   K    ++A  L+ +MK   + PD + Y  LI   C+  + N A+
Sbjct: 626 CSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAE 685

Query: 72  RLFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            LF EM  +G   P+VV +  +++   K  K D+A +L + M  + +     +  ++ + 
Sbjct: 686 ALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSES 745

Query: 131 FCLTGKINRAEELFG 145
           +C   ++ +  +L G
Sbjct: 746 WCCRHQVLKTGKLGG 760


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 186/357 (52%), Gaps = 1/357 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y   IDGLCK  +V +A  +  +M G  + P+V T+ +LI GLC       A RL
Sbjct: 141 PNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRL 200

Query: 74  FFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           F +++     +P+V T+ V++   C+ GK+  A  LL  MV++ ++PN  TY+TL+ G C
Sbjct: 201 FLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHC 260

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  +RA EL   M+  G   +  +YN +I+G+CK  +++EA  + R   S+G+K   +
Sbjct: 261 KGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKI 320

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L     +   + +AL LF+ M  +    D   Y + I   C+   + E+ + F   
Sbjct: 321 TYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKC 380

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            ++      Q Y  +I G CK GR  +AL +F  + +    AD +TY  +I GLC + ++
Sbjct: 381 LMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRL 440

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           ++A  L+  M +  + P  +  VTL   + R  K S  + +L ++ +++ +    +V
Sbjct: 441 EEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQVHTVDVV 497



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 152/302 (50%), Gaps = 1/302 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHAND 66
           +G   KPN  T+ T+IDGLCK G+ ++A  LFL++ K  +  P+V TY  +I G C    
Sbjct: 170 VGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGK 229

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
              A+ L   M++QG++P+  T+  ++   CK G  D A  L++ M Q    PN +TY+ 
Sbjct: 230 LARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNA 289

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++DGFC  GKI  A ++     S G K D ++Y ILI  +CK   +  AL L+  MV  G
Sbjct: 290 VIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENG 349

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
             P +  Y +L     +  Q+E + K F++     +     TY + I G CK G    A+
Sbjct: 350 CCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLAL 409

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            +F  +    C  D   Y  LI GLCK  RLE A  L+  +  + LV   VT   +    
Sbjct: 410 RVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEY 469

Query: 307 CN 308
           C 
Sbjct: 470 CR 471



 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 171/367 (46%), Gaps = 15/367 (4%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M  G G + VVC              C+EG V++  AL   M     + D  T   ++  
Sbjct: 72  MNRGFGALVVVC--------------CREGKVEEVDALLAAMWRYGFSLDNATCTVVVRS 117

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           LC    + +    F  M++ G  P+VV +   +D LCK   + +A  +L+ MV R ++PN
Sbjct: 118 LCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPN 177

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
            +T++TL+DG C  G   RA  LF  + +S   K +  +Y ++I GYC+  ++  A  L 
Sbjct: 178 VYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLL 237

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
             MV +G+KP   TY TL  G  +    + A +L  +M+++    +  TYN  IDG CK 
Sbjct: 238 VRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKK 297

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G I EA ++ R       + D   Y  LI   CK G +  AL+LF  +       D+  Y
Sbjct: 298 GKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAY 357

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
             +I   C   QM+++   F       + P    + ++I G+ ++ + +  + +  +M +
Sbjct: 358 TSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQ 417

Query: 360 KKVMPDA 366
                D+
Sbjct: 418 NGCFADS 424



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 154/356 (43%), Gaps = 36/356 (10%)

Query: 22  IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG 81
           ++    + G + +A  + L+M+   +   V T N ++        +  A+++F  M   G
Sbjct: 9   MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
           V P    F  ++   C+ GK++E   LL  M +     +  T + ++   C  G+     
Sbjct: 69  VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
           E F  M   G   + V+Y   I+G CK + V++A  +  EMV +G+KP V T+ TL  GL
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188

Query: 202 FEIHQVEHALKLFEE------------------------------------MQRDDVAAD 225
            +I   E A +LF +                                    M    +  +
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 248

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
           T+TY T I G CK G    A EL   +       +I  YN +IDG CK G+++ A ++ R
Sbjct: 249 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 308

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
               + L  D +TY I+I   C  G +  A DLF  M EN   P++  + +LI  +
Sbjct: 309 MATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTY 364



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 132/321 (41%), Gaps = 36/321 (11%)

Query: 55  NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
             ++     A    EA  +  EM   G+   V T N ++    + G    A ++ D M +
Sbjct: 7   RGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTR 66

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
             V P    +  L+   C  GK+   + L  +M   G   D+ +  +++   C+    ++
Sbjct: 67  AGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKD 126

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
               +R M+  G  P VV Y                                     +ID
Sbjct: 127 VSEFFRRMLETGTPPNVVNYTA-----------------------------------WID 151

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV-LV 293
           GLCK  Y+ +A  +   +     + ++  +  LIDGLCK G  E A  LF  L +     
Sbjct: 152 GLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYK 211

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            +V TY +MI G C +G++ +A  L + M E  + PN   + TLI G  +     +  EL
Sbjct: 212 PNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFEL 271

Query: 354 LHKMKEKKVMPDASIVSMVVD 374
           ++KMK++  +P+    + V+D
Sbjct: 272 MNKMKQEGFLPNIYTYNAVID 292



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 61/129 (47%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+   Y ++I   C++  +++++  F +     + P   TY S+I G C       A 
Sbjct: 350 CCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLAL 409

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R+F  M+  G     +T+  ++  LCK  +++EA  L + M+ + + P   T  TL   +
Sbjct: 410 RVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEY 469

Query: 132 CLTGKINRA 140
           C   K + A
Sbjct: 470 CRREKTSIA 478


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/350 (33%), Positives = 187/350 (53%), Gaps = 3/350 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    Y++I+   CK G V KA  +F +M  +   PD+V +N L+ GL  A   +EA+ L
Sbjct: 77  PTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAREL 136

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M  +G +P VVT+N ++  LCK  K+DEA  LL+ M Q DV P   TY+TL+D  C 
Sbjct: 137 FRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCK 196

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++ +A E+F  M    C   + +Y++L N   +  ++ EA  +Y +M  K +  T  T
Sbjct: 197 FTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNT 256

Query: 194 YNTLFLGLFEIH--QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           Y+ + LGL ++    VE A KL  EM    +A D   Y+  I+GLCK     EA E+F+ 
Sbjct: 257 YSLVVLGLSKMDGGNVEAA-KLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQE 315

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +        +  YN L++GL  + +L+ A+EL   +  +  + D  +YN+MI G C +G 
Sbjct: 316 MRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGD 375

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
            ++A+ LF DM ++ +  N   +  +I GF++    S    L  +M+  K
Sbjct: 376 TNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGK 425



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 190/362 (52%), Gaps = 4/362 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN + YN +I  LCK G + +A++ +L+   ++  P+VV+YN +I G C A +  +A   
Sbjct: 8   PNAILYNNLISCLCKAGMLAEAES-YLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAF 66

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM + G  P+   ++ I+   CK G + +A  +   M  +   P+   ++ L+ G   
Sbjct: 67  LREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWR 126

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             KI+ A ELF SM S GCK D V+YN +I G CK K+++EA+ L   M  + + PT VT
Sbjct: 127 ARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVT 186

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL   L +  +++ A ++FE+M     A     Y+   + L + G +VEA  ++  + 
Sbjct: 187 YTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMC 246

Query: 254 ILKCELDIQAYNCLIDGLCK--SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                +    Y+ ++ GL K   G +E A +L   +  + +  D   Y+I+I+GLC   +
Sbjct: 247 RKNVCMTDNTYSLVVLGLSKMDGGNVEAA-KLVTEMMGKKIAPDFYAYSILINGLCKARR 305

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
             +A ++F +M    ++P V+ + TL+ G +   K    +EL + M ++  +PD    ++
Sbjct: 306 PGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNL 365

Query: 372 VV 373
           ++
Sbjct: 366 MI 367



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 165/336 (49%), Gaps = 14/336 (4%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G    P+   Y+ +I+GLCK     +AK +F +M+G  I+P VVTYN+L+ GL      
Sbjct: 282 MGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKL 341

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            +A  L + M+DQG  P   ++N+++   C NG  +EA  L   M++  +  N +TY+ +
Sbjct: 342 QDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFM 401

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDV------SYNILINGYCKNKEVEEALSLYRE 181
           + GF      + A  LF  M+S   K+D V      +Y ILI+  CK  +VEEA  L   
Sbjct: 402 IVGFIKDEAWSSAWMLFKRMQS--GKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSA 459

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M  KG  P++  +  L   L    +++ A +L++EM R +      + N  +DG+ + G 
Sbjct: 460 MRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGS 519

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           + EA +  + +       D   Y+ L+ GLC  G+ + A +L   L R     +      
Sbjct: 520 VDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQ 579

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           ++  LC  G    A++ +  +      P+V + VTL
Sbjct: 580 LLGALCAQGDFQGAYEFYCWL------PSVGVEVTL 609



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 136/292 (46%), Gaps = 8/292 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T +YN +I G C  G  ++A  LF  M  + I  +  TYN +I G      W+ A  L
Sbjct: 358 PDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWML 417

Query: 74  FFEMM----DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           F  M     D+   P++ T+ +++  LCK  +++EA +LL  M  +   P+   +  L+ 
Sbjct: 418 FKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLS 477

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
                G+++ A EL+  M  + C+    S NIL++G  +   V+EA    ++M   GI P
Sbjct: 478 RLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVP 537

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
              TY+ L +GL    + + A KL EE+ RD    +       +  LC  G    A E +
Sbjct: 538 DKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFY 597

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
             L  +  E+ +  +N L+   C    L   L+    + +R  V DV+   I
Sbjct: 598 CWLPSVGVEVTLGMHNTLVTSCC----LARKLDYLDMIEQREGVPDVIVERI 645



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 96/195 (49%), Gaps = 1/195 (0%)

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M+  G+ P  + YN L   L +   +  A    + M +   A +  +YN  IDG CK   
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARN 59

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           I +A+   R +  L       AY+ ++   CK+G +  A+++F  +P +    D+V +N+
Sbjct: 60  IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           ++ GL    ++ +A +LF  M      P+V+ + T+I G  +  K  + + LL +MK++ 
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179

Query: 362 VMPDASIVSMVVDLL 376
           V P     + ++D L
Sbjct: 180 VSPTFVTYTTLIDHL 194



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 92/193 (47%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           +G+   V  PN  TY  +I  LCK   V++A  L   M+ +   P +  +  L+  L  A
Sbjct: 423 SGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARA 482

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
              ++A  L+ EM     Q  V + N+++D + + G +DEA   L  M    + P+ FTY
Sbjct: 483 GRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTY 542

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
             L+ G C  GK ++A +L   +   G + ++     L+   C   + + A   Y  + S
Sbjct: 543 DKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPS 602

Query: 185 KGIKPTVVTYNTL 197
            G++ T+  +NTL
Sbjct: 603 VGVEVTLGMHNTL 615


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 192/366 (52%), Gaps = 10/366 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ +TYN++I+  CK G + K    + +MK   + P+VV+Y++L+   C  +   +A 
Sbjct: 199 CEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAI 258

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           + + +M   G  P+  T+  ++D  CK G + +A RL + M++  V  N  TY+ L+DG 
Sbjct: 259 KFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGL 318

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++  AE+LFG M + G   +  SYN LI+G+ K K ++ AL L  E+  +GI+P +
Sbjct: 319 CDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDL 378

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           + Y T   GL  + ++E A  +  EMQ + + A+T  Y T +D   K+G   E + L   
Sbjct: 379 LLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEE 438

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV-LVADVVTYNIMIHGLCNDG 310
           +  L  E+ +  +  LIDGLCK+  +  A++ F  +     L  +   Y  MI GLC + 
Sbjct: 439 MQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKEN 498

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           Q+  A  LF  M +  + P+   + +L+ G ++     + + L  KM E         + 
Sbjct: 499 QVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAE---------IG 549

Query: 371 MVVDLL 376
           M +DLL
Sbjct: 550 MKLDLL 555



 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 197/364 (54%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC P    ++ +   L   G +++A   F +MK   + P   + N L+H        +  
Sbjct: 58  VCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGV 117

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           KR F +M+  G +P+V T+N+++D + K G ++ A  L + M  R + P+  TY++++DG
Sbjct: 118 KRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDG 177

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G+++     F  M+SM C+ D ++YN LIN +CK+ ++ + L  YREM   G+KP 
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPN 237

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VV+Y+TL     +   ++ A+K + +M+R     +  TY + +D  CK G + +A  L  
Sbjct: 238 VVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLAN 297

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +  +  E ++  Y  LIDGLC + R++ A +LF  +    ++ ++ +YN +IHG     
Sbjct: 298 EMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAK 357

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            MD+A +L  +++   + P+++++ T I G   + K      ++++M+E  +  +  I +
Sbjct: 358 NMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYT 417

Query: 371 MVVD 374
            ++D
Sbjct: 418 TLMD 421



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 187/403 (46%), Gaps = 36/403 (8%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           IG   KP   TYN +ID + KEG ++ A+ LF +MK   + PD VTYNS+I G       
Sbjct: 125 IGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRL 184

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++    F EM     +P V+T+N +++  CK+GK+ +       M Q  ++PN  +YSTL
Sbjct: 185 DDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTL 244

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D FC    + +A + +  M  +G   ++ +Y  L++  CK   + +A  L  EM+  G+
Sbjct: 245 VDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGV 304

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +  VVTY  L  GL +  +++ A KLF +M    V  + ++YN  I G  K   +  A+E
Sbjct: 305 EWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALE 364

Query: 248 LFRTLGILKCELDIQAYNCLIDGLC----------------------------------- 272
           L   L     + D+  Y   I GLC                                   
Sbjct: 365 LLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYF 424

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN-AVAPNV 331
           KSG     L L   +        VVT+ ++I GLC +  + KA D F  M  +  + PN 
Sbjct: 425 KSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNA 484

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            ++  +I G  + N+      L  +M ++ ++PD +  + ++D
Sbjct: 485 AVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMD 527



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 161/362 (44%), Gaps = 36/362 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V+Y+T++D  CKE  + +A   ++ M+     P+  TY SL+   C   + ++A R
Sbjct: 235 KPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFR 294

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM++ GV+ +VVT+  ++D LC   +M EA +L   MV   V PN  +Y+ L+ GF 
Sbjct: 295 LANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFV 354

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               ++RA EL   ++  G + D + Y   I G C  +++E A  +  EM   GIK   +
Sbjct: 355 KAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTL 414

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDD------------------------------- 221
            Y TL    F+       L L EEMQ  D                               
Sbjct: 415 IYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRM 474

Query: 222 -----VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
                +  + + Y   IDGLCK   +  A  LF  +       D  AY  L+DG  K G 
Sbjct: 475 SNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGN 534

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +  AL L   +    +  D++ Y  ++ G     Q+ KA     +M    + P+ ++ + 
Sbjct: 535 MLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIG 594

Query: 337 LI 338
           ++
Sbjct: 595 VL 596



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 159/298 (53%), Gaps = 3/298 (1%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           +AN   E+GV  + N VTY  +IDGLC    + +A+ LF +M    + P++ +YN+LIHG
Sbjct: 295 LANEMLEVGV--EWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHG 352

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
              A + + A  L  E+  +G+QP ++ +   +  LC   K++ A  +++ M +  ++ N
Sbjct: 353 FVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKAN 412

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
              Y+TLMD +  +G       L   M+ +  +   V++ +LI+G CKNK V +A+  + 
Sbjct: 413 TLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFG 472

Query: 181 EMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            M +  G++P    Y  +  GL + +QV+ A  LFE+M ++ +  D + Y + +DG  K 
Sbjct: 473 RMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQ 532

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           G ++EA+ L   +  +  +LD+ AY  L+ G  +  +L+ A      +    ++ D V
Sbjct: 533 GNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEV 590



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 5/194 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K NT+ Y T++D   K G   +   L  +M+  +    VVT+  LI GLC     ++A  
Sbjct: 410 KANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAID 469

Query: 73  LFFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            F  M  D G+QP+   +  ++D LCK  ++  A+ L + M Q  + P+   Y++LMDG 
Sbjct: 470 YFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGN 529

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G +  A  L   M  +G K D ++Y  L+ G+ +  ++++A S   EM+ + I P  
Sbjct: 530 LKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDE 589

Query: 192 VTYNTLFLGLFEIH 205
           V    L +G+ + H
Sbjct: 590 V----LCIGVLKKH 599



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 54/140 (38%), Gaps = 35/140 (25%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPD---------------------- 50
           +PN   Y  +IDGLCKE  V  A  LF QM  E + PD                      
Sbjct: 481 QPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALA 540

Query: 51  -------------VVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
                        ++ Y SL+ G    N   +A+    EM+ + + P  V    ++ +  
Sbjct: 541 LRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHY 600

Query: 98  KNGKMDEASRLLDLMVQRDV 117
           + G +DEA  L   +++  +
Sbjct: 601 ELGCIDEAVGLQSYLMKHQL 620


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 180/354 (50%), Gaps = 9/354 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VT+ T I   C+ G +D+A  L  QM      PDVV Y++LI+G       ++A 
Sbjct: 221 CPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQAL 280

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M+    +P+ V +N  +  LC   + ++   L+  MV++   PN  T+S L+   
Sbjct: 281 DLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSL 337

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    ++ A E+   ME  GC+ D V+YNI+IN   +   V++AL L   MV    KP  
Sbjct: 338 CQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDA 394

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           + +N +  G     +   A +L  +M RDD      T+N  ID LC+NG +  A ++F  
Sbjct: 395 LGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQ 454

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +C  DI  Y+ L++G  + G +E+A++LFRS+P +    D+ +YN ++ GLC   +
Sbjct: 455 MPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAAR 511

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            + A +L  +M      PN + F  LI+   +     + IE+L +M      PD
Sbjct: 512 WEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPD 565



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 180/356 (50%), Gaps = 9/356 (2%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           ++CKPNTV YN  + GLC     +    L  +M  +  +P+  T++ LI  LC  N  + 
Sbjct: 286 MLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDS 345

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +  +M   G +P  V +N+I++ L + G++D+A RLL+ MV    +P+A  ++ ++ 
Sbjct: 346 AVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLK 402

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GFC   + + A EL   M    C   ++++NILI+  C+N  V  A  ++ +M      P
Sbjct: 403 GFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTP 462

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            +VTY++L  G  E   VE A++LF  M       D  +YN  + GLC+     +A EL 
Sbjct: 463 DIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELI 519

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +    C  +   +N LI+ LC+ G ++ A+E+   +P      D+ TYN +I+G    
Sbjct: 520 AEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQ 579

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           G++D A  L   M   +  P+ I + + + G  R  +     EL+ +M   K  P+
Sbjct: 580 GRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPN 632



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 160/323 (49%), Gaps = 9/323 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T++ +I  LC+   VD A  +  QM+     PD V YN +I+ L      ++A 
Sbjct: 323 CSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDAL 382

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL   M+    +P  + FN ++   C+  +  +AS L+  M + D      T++ L+D  
Sbjct: 383 RLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTL 439

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +N A ++F  M    C  D V+Y+ L+NG+ +   VE A+ L+R M     KP +
Sbjct: 440 CQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDI 496

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +YN +  GL    + E A +L  EM   D   +  T+N  I+ LC+ G +  A+E+   
Sbjct: 497 FSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQ 556

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       DI  YN LI+G  + GRL+ AL+L  ++  +    D ++YN  + GLC   +
Sbjct: 557 MPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRAER 613

Query: 312 MDKAHDLFLDMEENAVAPNVIIF 334
              A +L  +M  N   PN + F
Sbjct: 614 WQDAEELVAEMLRNKCTPNEVTF 636



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 155/293 (52%), Gaps = 9/293 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+TV YN II+ L + G VD A  L   M      PD + +N+++ G C A  W++A 
Sbjct: 358 CEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDAS 414

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +M         +TFN+++D LC+NG ++ A+++ + M +    P+  TYS+L++GF
Sbjct: 415 ELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGF 474

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G +  A +LF    SM CK D  SYN ++ G C+    E+A  L  EMV K   P  
Sbjct: 475 SEQGLVEVAIQLF---RSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNE 531

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+N L   L +   V+ A+++ E+M       D  TYN  I+G  + G + +A++L  T
Sbjct: 532 VTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLST 591

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           +    C+ D  +YN  + GLC++ R + A EL   + R     + VT+    H
Sbjct: 592 MS---CKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANH 641



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 151/290 (52%), Gaps = 8/290 (2%)

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
           ++ N+++ +LC  G++ +A R+LD +       +A +++TL+ G+C  G++  AE + G+
Sbjct: 91  ISCNILIKKLCATGRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLGA 149

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
             + G   + V+Y  LI+GYC++  +++AL L   + S  + P   TYNT+  GL    +
Sbjct: 150 ARATG-AANVVTYTALIDGYCRSGRLDDALRL---IASMPVAPDTYTYNTVLKGLCIAKK 205

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
            E A +L  EM R+    +  T+ T I   C+NG +  AV+L   +    C  D+  Y+ 
Sbjct: 206 WEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYST 265

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LI+G  + G ++ AL+L  ++   +   + V YN  + GLC   + +   +L  +M    
Sbjct: 266 LINGFSEQGHVDQALDLLNTM---LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKG 322

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +PN   F  LI    + N     +E+L +M++    PD    +++++ L
Sbjct: 323 CSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSL 372



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 3/117 (2%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G  C PN VT+N +I+ LC++G VD+A  +  QM      PD+ TYN+LI+G       
Sbjct: 523 VGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRL 582

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
           ++A +L   M     +P  +++N  +  LC+  +  +A  L+  M++    PN  T+
Sbjct: 583 DDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 636


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 183/359 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y T+IDG CK G V  AK LF +M    + P+  TY+ L++G        E  ++
Sbjct: 191 PNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQM 250

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           +  M   G+ P+   +N ++ E C  G +D+A ++   M ++ +     TY+ L+ G C 
Sbjct: 251 YENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K   A +L   +  +G   + V+YNILING+C   +++ A+ L+ ++ S G+ PT+VT
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVT 370

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G  ++  +  AL L +EM+   +A    TY   ID   +  Y  +A E+   + 
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLME 430

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+  Y+ LI GLC  G ++ A +LF+SL    L  + V YN MIHG C +G   
Sbjct: 431 KSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSY 490

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +A  L  +M  + + PNV  F + I    R  K  +   LL +M    + P  S+  MV
Sbjct: 491 RALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 190/359 (52%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++  +I G C+ G+  K   L   ++   ++P+VV Y +LI G C   +   AK LF +M
Sbjct: 160 SFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKM 219

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
              G+ P+  T++V+M+   K G   E  ++ + M +  + PNA+ Y+ L+  +C  G +
Sbjct: 220 DRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMV 279

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           ++A ++F  M   G     ++YNILI G C+ K+  EA+ L  ++   G+ P +VTYN L
Sbjct: 280 DKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNIL 339

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G  ++ +++ A++LF +++   ++    TYNT I G  K   +  A++L + +     
Sbjct: 340 INGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCI 399

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
                 Y  LID   +    E A E+   + +  LV DV TY+++IHGLC  G M +A  
Sbjct: 400 APSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASK 459

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           LF  + E  + PN +I+ T+IHG+ +     + + LL++M    ++P+ +     + LL
Sbjct: 460 LFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLL 518



 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 177/362 (48%), Gaps = 1/362 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C   T  Y+TI++        D+A      M  E   P   T+N+L+  L  +N +++A 
Sbjct: 85  CLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAW 144

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F E+  + V     +F +++   C+ G   +  RLL ++ +  + PN   Y+TL+DG 
Sbjct: 145 WIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGC 203

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A+ LF  M+ +G   +  +Y++L+NG+ K     E   +Y  M   GI P  
Sbjct: 204 CKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNA 263

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             YN L         V+ A K+F EM+   +A    TYN  I GLC+     EAV+L   
Sbjct: 264 YAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK 323

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +    +I  YN LI+G C  G+++ A+ LF  L    L   +VTYN +I G      
Sbjct: 324 VNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVEN 383

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +  A DL  +MEE  +AP+ + +  LI  F R+N   K  E+   M++  ++PD    S+
Sbjct: 384 LAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSV 443

Query: 372 VV 373
           ++
Sbjct: 444 LI 445



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 173/341 (50%), Gaps = 4/341 (1%)

Query: 37  ALFLQMKGENINPDVV---TYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIM 93
           +L LQ+   +  P +     Y+++++   H++  ++A      M+ +G  P   TFN +M
Sbjct: 72  SLMLQLTQAHFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLM 131

Query: 94  DELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCK 153
             L ++   D+A  + + + +  V  +A+++  ++ G C  G   +   L   +E  G  
Sbjct: 132 CLLIRSNYFDKAWWIFNEL-KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLS 190

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            + V Y  LI+G CK   V  A +L+ +M   G+ P   TY+ L  G F+        ++
Sbjct: 191 PNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQM 250

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
           +E M+R  +  +   YN  I   C  G + +A ++F  +        +  YN LI GLC+
Sbjct: 251 YENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
             +   A++L   + +  L  ++VTYNI+I+G C+ G+MD A  LF  ++ + ++P ++ 
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVT 370

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + TLI G+ ++   +  ++L+ +M+E+ + P     ++++D
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILID 411



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN+V YNT+I G CKEG   +A  L  +M    + P+V ++ S I  LC    W EA+ 
Sbjct: 470 QPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAEL 529

Query: 73  LFFEMMDQGVQPSVVTFNVI 92
           L  +M++ G++PSV  + ++
Sbjct: 530 LLGQMINSGLKPSVSLYKMV 549


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 190/352 (53%), Gaps = 7/352 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y   +DGLCK G+V +A  +  +M G+ + P+V T+ SLI GLC       A RL
Sbjct: 249 PNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRL 308

Query: 74  FFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           F +++     +P+V T+ V++   CK GK+  A  LL  MV++ + PN  TY+TL+DG C
Sbjct: 309 FLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHC 368

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  +RA EL   M+  G   +  +YN +I G+CK  ++++A  + R   S+G+ P  V
Sbjct: 369 RGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKV 428

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR-- 250
           TY  L     +   + +AL LF +M  +    D  TY T I   C+   + ++ +LF   
Sbjct: 429 TYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKC 488

Query: 251 -TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
            ++G++  +   Q Y  +I G C+ G+   AL++F  + +   + D +TY  +I GLC +
Sbjct: 489 LSIGLVPTK---QTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKE 545

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
            ++++A  LF  M +  + P  +  VTL + + R +K +  +  L  + +++
Sbjct: 546 SRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLDGLDKRQ 597



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 175/358 (48%), Gaps = 1/358 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G+  +P+  ++  ++ G C+EG  ++A AL   M  E  + D  T   ++   C    + 
Sbjct: 174 GMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFR 233

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +   LF  M++ G  P+VV +   +D LCK G + +A  +L+ MV + ++PN +T+++L+
Sbjct: 234 DVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLI 293

Query: 129 DGFCLTGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           DG C  G   RA  LF  + +S   K +  +Y ++I GYCK  ++  A  L   MV +G+
Sbjct: 294 DGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGL 353

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P   TY TL  G       + A +L  +M+ +    +  TYN  I G CK G I +A +
Sbjct: 354 APNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYK 413

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           + R         D   Y  LI   CK G +  AL+LF  +       D+ TY  +I   C
Sbjct: 414 VLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYC 473

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
              QM+++  LF       + P    + ++I G+ R+ K +  +++  +M +   +PD
Sbjct: 474 QQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPD 531



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 147/325 (45%), Gaps = 48/325 (14%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHAND 66
           +G   KPN  T+ ++IDGLCK G+ ++A  LFL++ K  +  P+V TY  +I G C    
Sbjct: 278 VGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGK 337

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
              A+ L   M++QG+ P+  T+  ++D  C+ G  D A  L++ M      PN +TY+ 
Sbjct: 338 LARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNA 397

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM---- 182
           ++ GFC  GKI +A ++     S G   D V+Y +LI  +CK   +  AL L+ +M    
Sbjct: 398 IIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENS 457

Query: 183 -------------------------------VSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
                                          +S G+ PT  TY ++  G   + +   AL
Sbjct: 458 CHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSAL 517

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC----- 266
           K+FE M +     D  TY   I GLCK   + EA  LF T+      LD     C     
Sbjct: 518 KVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETM------LDKHMVPCDVTCV 571

Query: 267 -LIDGLCKSGRLEIALELFRSLPRR 290
            L    C+  +  IA+     L +R
Sbjct: 572 TLAYEYCRRDKTTIAVSFLDGLDKR 596



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 1/221 (0%)

Query: 146 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 205
           + + MG + D  S+  L+ G C+    EEA +L   M  +G      T   +        
Sbjct: 171 AFDGMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQG 230

Query: 206 QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYN 265
           +      LF  M       +   Y  ++DGLCK GY+ +A  +   +     + ++  + 
Sbjct: 231 RFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHT 290

Query: 266 CLIDGLCKSGRLEIALELFRSLPR-RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
            LIDGLCK G  E A  LF  L +      +V TY +MI G C +G++ +A  L   M E
Sbjct: 291 SLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVE 350

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             +APN   + TLI G  R     +  EL++KMK +  +P+
Sbjct: 351 QGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPN 391



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 74/175 (42%), Gaps = 4/175 (2%)

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFID-GLCKNGYIVEAVELFRTLGILKCELDI 261
           E +++  A  +  E++   +     T N  +  GL +  +   A + F  +G+     D 
Sbjct: 125 ETNRLREATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGMGV---RPDA 181

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
           +++  L+ G C+ GR E A  L  ++ R     D  T  +++   C  G+      LF  
Sbjct: 182 RSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGR 241

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           M E    PNV+ +   + G  +     +   +L +M  K + P+    + ++D L
Sbjct: 242 MVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGL 296


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 196/357 (54%), Gaps = 1/357 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY ++I G+C++G +D A ALF +  G+ + P +V YN+LI GL       +A +L
Sbjct: 326 PDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQL 385

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M  +G+ P + T+N++++ LCK G + +A+ LL+  + +   P+ FT++TL+DG+C 
Sbjct: 386 MNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCK 445

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K++ A  +  SM S G   D ++YN ++NG CK  + E+ +  ++ ++ KG  P ++T
Sbjct: 446 RLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIIT 505

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           YN L   L +  +V  AL L EE++   +  D  ++ T I G C NG + EA +LFR + 
Sbjct: 506 YNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRME 565

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +    +  YN +I+   +   +++A +LF  +  +    D  TY +MI G C  G +
Sbjct: 566 QQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNV 625

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           +  +D  L   E    P++  F  +I+     ++  + + ++H M    V+P+A + 
Sbjct: 626 NSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVVT 682



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 201/407 (49%), Gaps = 42/407 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVT------------------ 53
           C+P+  +YN I++ L + G+ ++A  ++L+MK E I PDV T                  
Sbjct: 107 CEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAAL 166

Query: 54  -----------------YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
                            Y ++I G    N   EA  LF +M+  G+ P + TFN +M  L
Sbjct: 167 RLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHIL 226

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG-------KINRAEELFGSMES 149
           CK G + E  +LL+ +++  V PN FT++  + G C  G       K+  AE     M +
Sbjct: 227 CKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVN 286

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
            G + DD +YN +I GY K  ++++A  + ++   KG  P   TY +L +G+ +   ++H
Sbjct: 287 KGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDH 346

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           AL LFEE     +      YNT I GL + G +++A++L   +       DI  YN +I+
Sbjct: 347 ALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVIN 406

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           GLCK G +  A  L  +   +  + D+ T+N +I G C   +MD A  +   M  + V P
Sbjct: 407 GLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTP 466

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +VI + ++++G  +  KP  V+E    + EK  +P+    +++++ L
Sbjct: 467 DVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESL 513



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 193/368 (52%), Gaps = 7/368 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TYNTII G  K G +  A  +    K +   PD  TY SLI G+C   D + A  
Sbjct: 290 EPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALA 349

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF E + +G++PS+V +N ++  L + G + +A +L++ M +  + P+ +TY+ +++G C
Sbjct: 350 LFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLC 409

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A  L  +  + G   D  ++N LI+GYCK  +++ A+ +   M S G+ P V+
Sbjct: 410 KMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVI 469

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF--- 249
           TYN++  GL +  + E  ++ F+ +       +  TYN  I+ LCK   + EA++L    
Sbjct: 470 TYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEI 529

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV-TYNIMIHGLCN 308
           R  G++    D  ++  +I G C +G L+ A +LFR + ++  +   V TYNIMI+    
Sbjct: 530 RNRGLIP---DPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSE 586

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
              MD A  LF +M +    P+   +  +I GF ++   +   + L K  E   +P  + 
Sbjct: 587 KLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTT 646

Query: 369 VSMVVDLL 376
              V++ L
Sbjct: 647 FGRVINCL 654



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 195/372 (52%), Gaps = 9/372 (2%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQ-------MKGENINPDVVTYNSLIHGLCH 63
           VC PN  T+N  I GLC++G ++ A +  ++       M  + + PD  TYN++I+G   
Sbjct: 247 VC-PNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSK 305

Query: 64  ANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
                +A R+  +   +G  P   T+  ++  +C++G +D A  L +  + + ++P+   
Sbjct: 306 VGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVL 365

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           Y+TL+ G    G + +A +L   M   G   D  +YN++ING CK   V +A +L    +
Sbjct: 366 YNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAI 425

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
           +KG  P + T+NTL  G  +  ++++A+ + + M    V  D  TYN+ ++GLCK     
Sbjct: 426 AKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPE 485

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           + +E F+ +    C  +I  YN LI+ LCK+ ++  AL+L   +  R L+ D V++  +I
Sbjct: 486 DVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVI 545

Query: 304 HGLCNDGQMDKAHDLFLDMEEN-AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
            G CN+G +D+A+ LF  ME+   +   V  +  +I+ F          +L H+M +K  
Sbjct: 546 SGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGC 605

Query: 363 MPDASIVSMVVD 374
            PD+    +++D
Sbjct: 606 DPDSYTYRVMID 617



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 166/329 (50%), Gaps = 1/329 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G   KP+ V YNT+I GL ++G V KA  L   M  E ++PD+ TYN +I+GLC     
Sbjct: 355 LGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCV 414

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  L    + +G  P + TFN ++D  CK  KMD A  +LD M    V P+  TY+++
Sbjct: 415 SDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSI 474

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++G C   K     E F  +   GC  + ++YNILI   CK ++V EAL L  E+ ++G+
Sbjct: 475 LNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGL 534

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            P  V++ T+  G      ++ A +LF  M Q+  +    +TYN  I+   +   +  A 
Sbjct: 535 IPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQ 594

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +LF  +G   C+ D   Y  +IDG CK G +    +          V  + T+  +I+ L
Sbjct: 595 KLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCL 654

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           C   ++ +A  +   M    V P  ++ +
Sbjct: 655 CVQHRVHEAVGIVHLMVRTGVVPEAVVTI 683



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 185/379 (48%), Gaps = 22/379 (5%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K   +TY  +I+ L   G  D  + + ++M+   +N D    NSL+ G+  +   N  ++
Sbjct: 37  KHTFLTYKRMIEKLGFHGEFDAMERVLMEMR---LNVD----NSLLEGVYVSAMRNYGRK 89

Query: 73  L-------FFEMMD-QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
                    FE MD    +PS+ ++N IM+ L + G  ++A ++   M    + P+  T+
Sbjct: 90  GKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTF 149

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           +  +  FC T +   A  L  +M S GC+ + V Y  +I+G+ +     EA  L+ +M+ 
Sbjct: 150 TIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLR 209

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY--- 241
            GI P + T+N L   L +   ++   KL  ++ ++ V  +  T+N FI GLC+ G    
Sbjct: 210 LGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEG 269

Query: 242 ----IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
               +VEA      +     E D   YN +I G  K G+++ A  + +    +  V D  
Sbjct: 270 ANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEF 329

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           TY  +I G+C DG +D A  LF +     + P+++++ TLI G  +     K ++L++ M
Sbjct: 330 TYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDM 389

Query: 358 KEKKVMPDASIVSMVVDLL 376
            ++ + PD    ++V++ L
Sbjct: 390 SKEGMSPDIWTYNLVINGL 408



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 2/210 (0%)

Query: 169 NKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADT 226
            K+  +ALS++  +  + G K T +TY  +   L    + +   ++  EM+ + D +   
Sbjct: 17  QKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLE 76

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
             Y + +    + G + EAV++F  +    CE  I +YN +++ L + G    A +++  
Sbjct: 77  GVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLR 136

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +    +  DV T+ I I   C   +   A  L  +M       N +++ T+I GF   N 
Sbjct: 137 MKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENY 196

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +  EL +KM    + P  +  + ++ +L
Sbjct: 197 QVEAYELFNKMLRLGIFPHIATFNKLMHIL 226


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 198/381 (51%), Gaps = 17/381 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  T+N +I  LCK   +  A  +  +M    + PD  T+ +L+ G     + + A R
Sbjct: 190 KPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFR 249

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV----------------QRD 116
           +  +M+D G   + VT NV++   CK G+++EA   +D M                  + 
Sbjct: 250 VKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKG 309

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
            +P+ FTY+ L+D  C  GK+  A  L   ME  GC  + ++YN LI+G+CKNK++EEA 
Sbjct: 310 CQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAE 369

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            ++ +M  +G+    VTYNTL  GL +  +V+ A +L ++M  + +  D  TYN+ +   
Sbjct: 370 EIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYF 429

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           C+ G I +A ++ +T+    CE DI  Y  LI GLCK+GR+E+A  L RS+  + +V   
Sbjct: 430 CREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTP 489

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP-SKVIELLH 355
             YN +I  L    +  +A  LF +MEE    P+   +  +  G      P  + ++ + 
Sbjct: 490 HAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVI 549

Query: 356 KMKEKKVMPDASIVSMVVDLL 376
           +M EK  +P+ S   M+ + L
Sbjct: 550 EMIEKGFLPEFSSFYMLAEGL 570



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 177/364 (48%), Gaps = 17/364 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK-- 71
           P+  T+ T++ G  +EG +D A  +  QM         VT N L+HG C      EA   
Sbjct: 226 PDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSF 285

Query: 72  --------------RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV 117
                          L+ EM ++G QP   T+N+++D LC  GK+ EA  LL  M     
Sbjct: 286 IDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGC 345

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
             N  TY+TL+DGFC   KI  AEE+F  ME  G   + V+YN LI+G CK++ V+EA  
Sbjct: 346 ARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQ 405

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           L  +M+ +G+KP   TYN++         ++ A  + + M  +    D  TY T I GLC
Sbjct: 406 LMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLC 465

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           K G +  A  L R++ +    L   AYN +I  L K  R + A+ LFR +  +    D  
Sbjct: 466 KAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAF 525

Query: 298 TYNIMIHGLCND-GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           TY I+  GL N  G + +A D  ++M E    P    F  L  G   ++    +I+L+  
Sbjct: 526 TYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVDL 585

Query: 357 MKEK 360
           + EK
Sbjct: 586 VMEK 589



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/327 (33%), Positives = 166/327 (50%), Gaps = 16/327 (4%)

Query: 50  DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
           D + YN L++ L   N     + +   M+ +G++P V TFN+++  LCK  ++  A  ++
Sbjct: 157 DTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVM 216

Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
           + M    + P+  T++TLM GF   G ++ A  +   M   GC   +V+ N+L++G+CK 
Sbjct: 217 EEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKE 276

Query: 170 KEVEEALS----------------LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
             +EEALS                LY EM +KG +P   TYN L   L    +++ AL L
Sbjct: 277 GRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGL 336

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
             EM+    A +  TYNT IDG CKN  I EA E+F  + I     +   YN LIDGLCK
Sbjct: 337 LREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCK 396

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           S R++ A +L   +    L  D  TYN M+   C +G + KA D+   M  N   P+++ 
Sbjct: 397 SRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVT 456

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEK 360
           + TLI G  +  +      LL  ++ K
Sbjct: 457 YGTLIGGLCKAGRVEVASRLLRSIQLK 483



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 93/265 (35%), Positives = 147/265 (55%), Gaps = 7/265 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+  TYN +ID LC  G + +A  L  +M+      +V+TYN+LI G C      EA+
Sbjct: 310 CQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAE 369

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F +M  QG+  + VT+N ++D LCK+ ++ EA++L+D M+   ++P+ FTY++++  F
Sbjct: 370 EIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYF 429

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I +A ++  +M S GC+ D V+Y  LI G CK   VE A  L R +  KG+  T 
Sbjct: 430 CREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTP 489

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN-GYIVEAVELFR 250
             YN +   LF+  + + A++LF EM+      D  TY     GL  + G I EAV+   
Sbjct: 490 HAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVI 549

Query: 251 TL---GILKCELDIQAYNCLIDGLC 272
            +   G L    +  ++  L +GLC
Sbjct: 550 EMIEKGFLP---EFSSFYMLAEGLC 571



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 166/340 (48%), Gaps = 21/340 (6%)

Query: 25  GLCKEGFVDKAKA----------------LFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G CKEG +++A +                L+ +MK +   PD  TYN LI  LC+     
Sbjct: 272 GFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQ 331

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  L  EM   G   +V+T+N ++D  CKN K++EA  + D M  + +  N+ TY+TL+
Sbjct: 332 EALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLI 391

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C + ++  A +L   M   G K D  +YN ++  +C+  ++++A  + + M S G +
Sbjct: 392 DGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCE 451

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P +VTY TL  GL +  +VE A +L   +Q   +      YN  I  L K     EA+ L
Sbjct: 452 PDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRL 511

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKS-GRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           FR +       D   Y  +  GL  S G +  A++    +  +  + +  ++ ++  GLC
Sbjct: 512 FREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLC 571

Query: 308 NDGQMDKAHDLF-LDMEENAVAPNVIIFVTLIHGFVRINK 346
           +    D    L  L ME+   + N ++   +I GF++I K
Sbjct: 572 SLSMEDTLIKLVDLVMEKANFSQNEVV---MIRGFLKIRK 608



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 156/369 (42%), Gaps = 59/369 (15%)

Query: 53  TYNSLIHGLCHANDWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDL 111
           T   L+  L   ND   A RL      Q   +P+   +  I+ +L K G  +    +L  
Sbjct: 53  TPAQLLDTLRRQNDETAALRLLSWASKQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQE 112

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM----GCKHDDVSYNILINGYC 167
           M   D + +       +D +    K    EE+   +E M    G   D + YN L+N   
Sbjct: 113 MKGLDCQIDRGVLLIFIDSY---AKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLV 169

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
              +++   +++  MVSKGIKP V T+N L   L + HQ+  A+ + EEM    +  D  
Sbjct: 170 DGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEK 229

Query: 228 TYNT----FID-------------------------------GLCKNGYIVE-------- 244
           T+ T    FI+                               G CK G I E        
Sbjct: 230 TFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEM 289

Query: 245 --------AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
                   A+EL+  +    C+ D   YN LID LC  G+L+ AL L R +       +V
Sbjct: 290 SNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNV 349

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           +TYN +I G C + ++++A ++F  ME   ++ N + + TLI G  +  +  +  +L+ +
Sbjct: 350 ITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQ 409

Query: 357 MKEKKVMPD 365
           M  + + PD
Sbjct: 410 MIMEGLKPD 418


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 186/357 (52%), Gaps = 1/357 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y   IDGLCK  +V +A  +  +M G  + P+V T+ +LI GLC       A RL
Sbjct: 249 PNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRL 308

Query: 74  FFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           F +++     +P+V T+ V++   C+ GK+  A  LL  MV++ ++PN  TY+TL+ G C
Sbjct: 309 FLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHC 368

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  +RA EL   M+  G   +  +YN +I+G+CK  +++EA  + R   S+G+K   +
Sbjct: 369 KGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKI 428

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L     +   + +AL LF+ M  +    D   Y + I   C+   + E+ + F   
Sbjct: 429 TYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKC 488

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            ++      Q Y  +I G CK GR  +AL +F  + +    AD +TY  +I GLC + ++
Sbjct: 489 LMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRL 548

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           ++A  L+  M +  + P  +  VTL   + R  K S  + +L ++ +++ +    +V
Sbjct: 549 EEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQVHTVDVV 605



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 152/302 (50%), Gaps = 1/302 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHAND 66
           +G   KPN  T+ T+IDGLCK G+ ++A  LFL++ K  +  P+V TY  +I G C    
Sbjct: 278 VGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGK 337

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
              A+ L   M++QG++P+  T+  ++   CK G  D A  L++ M Q    PN +TY+ 
Sbjct: 338 LARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNA 397

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++DGFC  GKI  A ++     S G K D ++Y ILI  +CK   +  AL L+  MV  G
Sbjct: 398 VIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENG 457

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
             P +  Y +L     +  Q+E + K F++     +     TY + I G CK G    A+
Sbjct: 458 CCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLAL 517

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            +F  +    C  D   Y  LI GLCK  RLE A  L+  +  + LV   VT   +    
Sbjct: 518 RVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEY 577

Query: 307 CN 308
           C 
Sbjct: 578 CR 579



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 172/357 (48%), Gaps = 2/357 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC P+  ++  ++   C+EG V++  AL   M     + D  T   ++  LC    + + 
Sbjct: 177 VC-PDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDV 235

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
              F  M++ G  P+VV +   +D LCK   + +A  +L+ MV R ++PN +T++TL+DG
Sbjct: 236 SEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDG 295

Query: 131 FCLTGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            C  G   RA  LF  + +S   K +  +Y ++I GYC+  ++  A  L   MV +G+KP
Sbjct: 296 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKP 355

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
              TY TL  G  +    + A +L  +M+++    +  TYN  IDG CK G I EA ++ 
Sbjct: 356 NTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVL 415

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           R       + D   Y  LI   CK G +  AL+LF  +       D+  Y  +I   C  
Sbjct: 416 RMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQ 475

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            QM+++   F       + P    + ++I G+ ++ + +  + +  +M +     D+
Sbjct: 476 RQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADS 532



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 155/356 (43%), Gaps = 36/356 (10%)

Query: 22  IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG 81
           ++    + G + +A  + L+M+   +   V T N ++        +  A+++F  M   G
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
           V P   +F  ++   C+ GK++E   LL  M +     +  T + ++   C  G+     
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 236

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
           E F  M   G   + V+Y   I+G CK + V++A  +  EMV +G+KP V T+ TL  GL
Sbjct: 237 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 296

Query: 202 FEIHQVEHALKLFEE------------------------------------MQRDDVAAD 225
            +I   E A +LF +                                    M    +  +
Sbjct: 297 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 356

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
           T+TY T I G CK G    A EL   +       +I  YN +IDG CK G+++ A ++ R
Sbjct: 357 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 416

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
               + L  D +TY I+I   C  G +  A DLF  M EN   P++  + +LI  +
Sbjct: 417 MATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTY 472



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 134/321 (41%), Gaps = 36/321 (11%)

Query: 55  NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
             ++     A    EA  +  EM   G+   V T N ++    + G    A ++ D M +
Sbjct: 115 RGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTR 174

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
             V P+  ++  L+   C  GK+   + L  +M   G   D+ +  +++   C+    ++
Sbjct: 175 AGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKD 234

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
               +R M+  G  P VV Y                                     +ID
Sbjct: 235 VSEFFRRMLETGTPPNVVNYTA-----------------------------------WID 259

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV-LV 293
           GLCK  Y+ +A  +   +     + ++  +  LIDGLCK G  E A  LF  L +     
Sbjct: 260 GLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYK 319

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            +V TY +MI G C +G++ +A  L + M E  + PN   + TLI G  +     +  EL
Sbjct: 320 PNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFEL 379

Query: 354 LHKMKEKKVMPDASIVSMVVD 374
           ++KMK++  +P+    + V+D
Sbjct: 380 MNKMKQEGFLPNIYTYNAVID 400



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 61/129 (47%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+   Y ++I   C++  +++++  F +     + P   TY S+I G C       A 
Sbjct: 458 CCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLAL 517

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R+F  M+  G     +T+  ++  LCK  +++EA  L + M+ + + P   T  TL   +
Sbjct: 518 RVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEY 577

Query: 132 CLTGKINRA 140
           C   K + A
Sbjct: 578 CRREKTSIA 586


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 197/424 (46%), Gaps = 70/424 (16%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GVV  P+  TYN +IDG CK G +  A  +   M+G   NPD  TYNSLIHGLC     +
Sbjct: 318 GVV--PSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGGKP-D 374

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR---------- 118
           EA+ L    + +G  P+V+TF  I++  CK  K+D+A R+  +M+    +          
Sbjct: 375 EAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLI 434

Query: 119 -------------------------PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCK 153
                                    PN   Y++++D +C  GK+  A E+F   E  GC+
Sbjct: 435 SVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCR 494

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            +  +Y+ LI G  +++++ +A++L  +M   GI P V+TY TL  G  + H+ ++A +L
Sbjct: 495 PNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRL 554

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL------------------ 255
           FE M+++ +  D   YN   D LCK+G   EA       G++                  
Sbjct: 555 FEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGN 614

Query: 256 --------------KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
                          C+ D   Y+ L+  LCK  +L  AL +   +  R +  ++V Y I
Sbjct: 615 TEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTI 674

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +I  +  +G+ D A  +F +M  +   P+ I +   I  + +I +  +   L+ +M+   
Sbjct: 675 IISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNG 734

Query: 362 VMPD 365
           V PD
Sbjct: 735 VAPD 738



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 181/362 (50%), Gaps = 1/362 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +T T N ++ G C+ G + KA  L + M       +  +Y  LI GLC      EA  L 
Sbjct: 217 DTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLL 276

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M+  G  P++ T+ +++  LCK G++ +A  LLD M +R V P+ +TY+ ++DG+C +
Sbjct: 277 LMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKS 336

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G++  A  +   ME  GC  DD +YN LI+G C  K  +EA  L    +++G  PTV+T+
Sbjct: 337 GRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGGKP-DEAEELLNGAIARGFSPTVITF 395

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             +  G  +  +++ AL++   M       D   Y   I  L K   + EA +    +  
Sbjct: 396 TNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFA 455

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                ++  Y  +ID  CK G++  ALE+F+         +  TY+ +I+GL  D ++ K
Sbjct: 456 NGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHK 515

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  L   M+E+ + P VI + TLI G  + ++      L   M++  + PD    +++ D
Sbjct: 516 AMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTD 575

Query: 375 LL 376
            L
Sbjct: 576 AL 577



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 188/405 (46%), Gaps = 56/405 (13%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN  TY+++I GL ++  + KA AL  +M+ + I P V+TY +LI G C  ++++ A 
Sbjct: 493 CRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAF 552

Query: 72  RLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           RLF EMM+Q G+ P    +NV+ D LCK+G+ +EA   L   V++ V     TY++L+DG
Sbjct: 553 RLF-EMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VKKGVVLTKVTYTSLVDG 608

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS------------- 177
           F   G    A  L   M + GCK D  +Y++L+   CK K++ EALS             
Sbjct: 609 FSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGN 668

Query: 178 ----------------------LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
                                 ++ EM+S G KP+ +TY        +I ++E A  L  
Sbjct: 669 IVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIG 728

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLI------- 268
           EM+R+ VA D  TYN FI+G    GY+  A    + +    CE +   Y  L+       
Sbjct: 729 EMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMS 788

Query: 269 ---------DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
                     G+    +L+   +L   + +  L    VTY+ +I G C   ++++A  L 
Sbjct: 789 LANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLL 848

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
             M    ++PN  I+  LI     I    K    +  M E    P
Sbjct: 849 DHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQP 893



 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 182/361 (50%), Gaps = 3/361 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N  +Y  +I GLC+   V +A  L L M  +  +P++ TY  LI GLC     ++A+
Sbjct: 249 CRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDAR 308

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM  +GV PSV T+N ++D  CK+G++ +A  +  LM      P+ +TY++L+ G 
Sbjct: 309 VLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGL 368

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK + AEEL     + G     +++  +INGYCK +++++AL +   M+S   K  +
Sbjct: 369 C-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDL 427

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y  L   L + H+++ A     E+  + ++ +   Y + ID  CK G +  A+E+F+ 
Sbjct: 428 QAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKL 487

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                C  +   Y+ LI GL +  +L  A+ L   +    +   V+TY  +I G C   +
Sbjct: 488 TEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 547

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D A  LF  ME+N + P+   +  L     +  +  +    L  +K+  V+   +  S+
Sbjct: 548 FDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL--VKKGVVLTKVTYTSL 605

Query: 372 V 372
           V
Sbjct: 606 V 606



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 169/374 (45%), Gaps = 16/374 (4%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTY +++DG  K G  + A AL  +M  E    D  TY+ L+  LC     NEA  +  +
Sbjct: 600 VTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQ 659

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M  +GV+ ++V + +I+ E+ K GK D A  + + M+    +P+A TY+  +  +C  G+
Sbjct: 660 MTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGR 719

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           I  A  L G ME  G   D V+YN+ ING      ++ A S  + M+    +P   TY  
Sbjct: 720 IEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWL 779

Query: 197 L---FL-------------GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           L   FL             G++   +++   +L E M +  +     TY++ I G CK  
Sbjct: 780 LLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKAT 839

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            + EA  L   +       + + Y  LI   C     E A     ++        + +Y+
Sbjct: 840 RLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYH 899

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +I GLC++G  DKA  LF D+ E     N + +  L  G ++        +LL  M+ +
Sbjct: 900 YLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENR 959

Query: 361 KVMPDASIVSMVVD 374
               D+   SMV +
Sbjct: 960 HCRIDSETYSMVTN 973



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 163/355 (45%), Gaps = 36/355 (10%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           YN  +  L   +      +L+ +++ +G+ P  VT+N ++   CK G +  A R   L+ 
Sbjct: 151 YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLR 210

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
           +  +  + +T + L+ G+C TG + +A  L   M  MGC+ ++ SY ILI G C+ + V 
Sbjct: 211 ESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVR 270

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           EAL L   M+  G  P + TY  L  GL +  ++  A  L +EM R  V     TYN  I
Sbjct: 271 EALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMI 330

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
           DG CK+G + +A+ +   +    C  D   YN LI GLC  G+ + A EL      R   
Sbjct: 331 DGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFS 389

Query: 294 ADVVTYNIMIHGLCNDGQMD-----------------------------------KAHDL 318
             V+T+  +I+G C   ++D                                   +A D 
Sbjct: 390 PTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDT 449

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
             ++  N ++PNV+I+ ++I  + ++ K    +E+    + +   P+A   S ++
Sbjct: 450 LNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLI 504



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 147/328 (44%), Gaps = 16/328 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CK ++ TY+ ++  LCK+  +++A ++  QM    +  ++V Y  +I  +      + AK
Sbjct: 630 CKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAK 689

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F EM+  G +PS +T+ V +   CK G+++EA  L+  M +  V P+  TY+  ++G 
Sbjct: 690 SMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGC 749

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK----------------EVEEA 175
              G ++ A      M    C+ +  +Y +L+  + K                  +++  
Sbjct: 750 GHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTV 809

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
             L   MV  G+ PT VTY+++  G  +  ++E A  L + M   D++ +   Y   I  
Sbjct: 810 WQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKC 869

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
            C      +A      +     +  +++Y+ LI GLC  G  + A  LF  L       +
Sbjct: 870 CCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHN 929

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDME 323
            V + I+  GL   G +D    L   ME
Sbjct: 930 EVAWKILNDGLLKAGHVDICSQLLSAME 957



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 129/310 (41%), Gaps = 16/310 (5%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N V Y  II  + KEG  D AK++F +M      P  +TY   I   C      EA  
Sbjct: 666 KGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGH 725

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM   GV P VVT+NV ++     G MD A   L  M+     PN +TY  L+  F 
Sbjct: 726 LIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFL 785

Query: 133 LTG----------------KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
                              K++   +L   M   G     V+Y+ +I G+CK   +EEA 
Sbjct: 786 KMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEAC 845

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            L   M+ K I P    Y  L     +I   E A      M          +Y+  I GL
Sbjct: 846 VLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGL 905

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           C  G   +A  LF  L  +    +  A+  L DGL K+G ++I  +L  ++  R    D 
Sbjct: 906 CDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDS 965

Query: 297 VTYNIMIHGL 306
            TY+++ + +
Sbjct: 966 ETYSMVTNNI 975



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 92/205 (44%)

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
           +E  +A+   R    K +  +   YN     L      EH  KL+ ++ ++ +  DT TY
Sbjct: 127 REAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTY 186

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           NT I   CK G +  A   FR L     E+D    N L+ G C++G L  A  L   +P 
Sbjct: 187 NTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPL 246

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
                +  +Y I+I GLC    + +A  L L M ++  +PN+  +  LI G  +  +   
Sbjct: 247 MGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHD 306

Query: 350 VIELLHKMKEKKVMPDASIVSMVVD 374
              LL +M  + V+P     + ++D
Sbjct: 307 ARVLLDEMPRRGVVPSVWTYNAMID 331



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 6/166 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTY++II G CK   +++A  L   M G++I+P+   Y  LI   C    + +A   
Sbjct: 823 PTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASF 882

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M++ G QP + +++ ++  LC  G  D+A  L   +++ D   N   +  L DG   
Sbjct: 883 VTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLK 942

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
            G ++   +L  +ME+  C+ D  +Y+++ N       + EA  +Y
Sbjct: 943 AGHVDICSQLLSAMENRHCRIDSETYSMVTN------NIHEASGMY 982



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 16/204 (7%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGF----------------VDKAKALFLQMKGENINPDV 51
           I   C+PN  TY  ++    K                   +D    L  +M    +NP  
Sbjct: 766 IDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTA 825

Query: 52  VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL 111
           VTY+S+I G C A    EA  L   M+ + + P+   + +++   C     ++A+  +  
Sbjct: 826 VTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTN 885

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           M++   +P+  +Y  L+ G C  G  ++A+ LF  +  M   H++V++ IL +G  K   
Sbjct: 886 MIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGH 945

Query: 172 VEEALSLYREMVSKGIKPTVVTYN 195
           V+    L   M ++  +    TY+
Sbjct: 946 VDICSQLLSAMENRHCRIDSETYS 969



 Score = 42.0 bits (97), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 51/102 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  +Y+ +I GLC EG  DKAKALF  +   + N + V +  L  GL  A   +   +
Sbjct: 892 QPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQ 951

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
           L   M ++  +    T++++ + + +   M E+     L+ Q
Sbjct: 952 LLSAMENRHCRIDSETYSMVTNNIHEASGMYESYMCAPLVGQ 993


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 188/366 (51%), Gaps = 3/366 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMK--GENINPDVVTYNSLIHGLCHANDWNEA 70
           +P+  TYN +  GLC+ G VD+A  L  +M+  G  + PDVVTYN+L+         ++A
Sbjct: 310 EPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTAL-PDVVTYNTLVDACFKWRCSSDA 368

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            RL  EM D+GV+P++VT N+++  LCK GK++EA   L+ + +  + P+  TY+TL+D 
Sbjct: 369 LRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +C  G + +A  L   M   G K D  + N ++   CK K  E+A  L      +G  P 
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            V+Y T+    F+ +  E AL+L+++M    +    STYNT I GLC+   + EA++   
Sbjct: 489 EVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLN 548

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
                    D   YN +I   CK G LE A      +       DVVT N +++GLC  G
Sbjct: 549 EFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHG 608

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++DKA  LF    E     +VI + TLI    ++      +     M+ K + PDA   +
Sbjct: 609 KLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYN 668

Query: 371 MVVDLL 376
           +V+  L
Sbjct: 669 VVLSAL 674



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 189/361 (52%), Gaps = 1/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T+N ++   C +G +  A A    M+G  ++PD VTYN+L++  C      EA+ L
Sbjct: 206 PNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 265

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   G+ P+  T+N ++    + G + +A+++++ M      P+  TY+ L  G C 
Sbjct: 266 LARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQ 325

Query: 134 TGKINRAEELFGSMESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            GK++ A  L   ME +G    DV +YN L++   K +   +AL L  EM  KG+KPT+V
Sbjct: 326 AGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLV 385

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N +   L +  ++E AL   E++  + +A D  TYNT ID  CK G + +A  L   +
Sbjct: 386 THNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                ++D    N ++  LCK  R E A EL  S P+R  V D V+Y  ++     +   
Sbjct: 446 VGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNP 505

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A  L+  M E  + P++  + TLI G  R+ +  + I+ L++  EK ++PD +  +++
Sbjct: 506 EPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNII 565

Query: 373 V 373
           +
Sbjct: 566 I 566



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 176/346 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT++D   K      A  L  +M+ + + P +VT+N ++  LC      EA   
Sbjct: 347 PDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGK 406

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++ ++G+ P V+T+N ++D  CK G + +A  L+D MV + ++ + FT +T++   C 
Sbjct: 407 LEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCK 466

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +   AEEL  S    G   D+VSY  ++  Y K    E AL L+ +M+ + + P++ T
Sbjct: 467 MKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIST 526

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL  + +++ A+    E     +  D +TYN  I   CK G +  A      + 
Sbjct: 527 YNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMV 586

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+   N L++GLC  G+L+ AL+LF S   +    DV+TYN +I  +C  G +D
Sbjct: 587 ENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVD 646

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
            A   F DME   + P+   +  ++       +  +   +LHK+ +
Sbjct: 647 TALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 159/307 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VT+N ++  LCKEG +++A     ++  E + PDV+TYN+LI   C A +  +A  
Sbjct: 381 KPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFT 440

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+ +G++    T N ++  LCK  + ++A  LL    QR   P+  +Y T+M  + 
Sbjct: 441 LMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYF 500

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                  A  L+  M          +YN LI G C+ + ++EA+    E V KG+ P   
Sbjct: 501 KEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDET 560

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN +     +   +E+A +   +M  +    D  T NT ++GLC +G + +A++LF + 
Sbjct: 561 TYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESW 620

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                ++D+  YN LI  +CK G ++ AL  F  +  + L  D  TYN+++  L   G+ 
Sbjct: 621 VEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRS 680

Query: 313 DKAHDLF 319
           ++AH++ 
Sbjct: 681 EEAHNML 687



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 169/376 (44%), Gaps = 50/376 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TYNT+ID  CK G V KA  L  +M G+ +  D  T N++++ LC    + +A+ L
Sbjct: 417 PDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEEL 476

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
                 +G  P  V++  +M    K    + A RL D M++R + P+  TY+TL+ G C 
Sbjct: 477 LHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCR 536

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCK-----------NKEVE--------- 173
             ++  A +        G   D+ +YNI+I+ YCK           NK VE         
Sbjct: 537 MERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVT 596

Query: 174 ---------------EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
                          +AL L+   V KG K  V+TYNTL   + ++  V+ AL  F++M+
Sbjct: 597 CNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDME 656

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCKSG 275
              +  D  TYN  +  L + G   EA  +   L   G L      Q++ C +  L  S 
Sbjct: 657 VKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLS-----QSFACPL--LKPSS 709

Query: 276 RLEIALELFRSLP-----RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
             E  ++     P      +     + TY   ++GLC  GQ+ +A  +  +M +  +  +
Sbjct: 710 ADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVD 769

Query: 331 VIIFVTLIHGFVRINK 346
              ++TL+ G ++  K
Sbjct: 770 CSTYITLMEGLIKRQK 785



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 156/334 (46%), Gaps = 3/334 (0%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL--FFEMMDQGVQPSVVTFNVI 92
           A+ L    +   + P +   N+++  L  +        L  F  +++  + P+  TFN++
Sbjct: 155 AQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLL 214

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           +   C  G + +A   L  M    + P+A TY+TL++  C  G +  A  L   M+  G 
Sbjct: 215 VHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGI 274

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
                +YN L++ + +   +++A  +   M + G +P + TYN L +GL +  +V+ A +
Sbjct: 275 APTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFR 334

Query: 213 LFEEMQRDDVA-ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           L +EM+R   A  D  TYNT +D   K     +A+ L   +     +  +  +N ++  L
Sbjct: 335 LKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSL 394

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           CK G+LE AL     +    L  DV+TYN +I   C  G + KA  L  +M    +  + 
Sbjct: 395 CKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDT 454

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
               T+++   ++ +     ELLH   ++  +PD
Sbjct: 455 FTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 36/155 (23%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + +TYNT+I  +CK G VD A   F  M+ + + PD  TYN ++  L  A    EA  
Sbjct: 626 KVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHN 685

Query: 73  LFFEMMDQG----------VQPSVV--------------------------TFNVIMDEL 96
           +  ++ D G          ++PS                            T+   ++ L
Sbjct: 686 MLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGL 745

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           C  G++ EA  +LD M+Q+ +  +  TY TLM+G 
Sbjct: 746 CTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGL 780


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 197/361 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+YN +I G CK+G +DKA ++   +    + P+ VTY  LI G     D   A  +
Sbjct: 462 PSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVV 521

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +MM   + P+  TFN +++ L K G++ E    L+  +++     + TY++++DGF  
Sbjct: 522 FEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFK 581

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A   +  M   G   D ++Y  LI+G CK+ ++  AL ++ +M  KG+K  VV 
Sbjct: 582 EGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVA 641

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  G  ++H +E A K F E+    +  +T  YN+ I G      +  A+ L + + 
Sbjct: 642 YSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMI 701

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K   D+Q Y  +I GL K G+L +AL+L+  +  + +V D+V Y ++I+GL N+GQ++
Sbjct: 702 KNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLE 761

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  +  +M+ N + P+V+++  LI G  R     +   L  +M +K ++PD +   ++V
Sbjct: 762 NASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILV 821

Query: 374 D 374
           +
Sbjct: 822 N 822



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 197/364 (54%), Gaps = 1/364 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN    N++++G  ++  ++ A  LF +     I  +VVTYN L+  L      NEA  
Sbjct: 392 QPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACN 450

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L+ +M+ +G+ PS+V++N ++   CK G MD+A  +L  +++R ++PNA TY+ L+DGF 
Sbjct: 451 LWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFF 510

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G   RA  +F  M +      D ++N +ING  K   V E        + +G   T +
Sbjct: 511 KKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSI 570

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN++  G F+   V+ AL  + EM    ++ D  TY + IDGLCK+  I  A+E+   +
Sbjct: 571 TYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDM 630

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +LD+ AY+ LIDG CK   +E A + F  L    L  + V YN MI G  +   M
Sbjct: 631 KYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNM 690

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A +L  +M +N V  ++ ++ ++I G ++  K S  ++L  +M  K ++PD  + +++
Sbjct: 691 EAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVL 750

Query: 373 VDLL 376
           ++ L
Sbjct: 751 INGL 754



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 180/333 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTY  +IDG  K+G  ++A  +F QM   NI P   T+N++I+GL      +E + 
Sbjct: 496 KPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQD 555

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
                + QG   + +T+N I+D   K G +D A      M +  + P+  TY++L+DG C
Sbjct: 556 KLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLC 615

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            + KI  A E+   M+  G K D V+Y+ LI+G+CK  ++E A   + E++  G+ P  V
Sbjct: 616 KSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTV 675

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN++  G   ++ +E AL L +EM ++ V  D   Y + I GL K G +  A++L+  +
Sbjct: 676 VYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEM 735

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  DI  Y  LI+GL  +G+LE A ++ + +    +   V+ YNI+I G   +G +
Sbjct: 736 LSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNL 795

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            +A  L  +M +  + P+   +  L++G ++++
Sbjct: 796 QEAFRLHDEMLDKGLVPDDTTYDILVNGKLKVS 828



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 200/436 (45%), Gaps = 71/436 (16%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E G V  P+  TY  +I    K+G   +A  L  +M    +  +V+   SL+ G C   D
Sbjct: 283 EFGWV--PSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGD 340

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            N A +LF E+++ GV P VV F+V+++   K G M++A  L   M    ++PN F  ++
Sbjct: 341 VNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNS 400

Query: 127 LMDGF-----------------------CLT-----------GKINRAEELFGSMESMGC 152
           L++GF                        +T           GK+N A  L+  M S G 
Sbjct: 401 LLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGI 460

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
               VSYN LI G+CK   +++A S+ + ++ +G+KP  VTY  L  G F+    E A  
Sbjct: 461 TPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFV 520

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL-----------------GIL 255
           +FE+M   ++A    T+NT I+GL K G + E  +                      G  
Sbjct: 521 VFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFF 580

Query: 256 K--------------CEL----DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           K              CE     D+  Y  LIDGLCKS ++ +ALE+   +  + +  DVV
Sbjct: 581 KEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVV 640

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            Y+ +I G C    M+ A   F ++ +  + PN +++ ++I GF+ +N     + L  +M
Sbjct: 641 AYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEM 700

Query: 358 KEKKVMPDASIVSMVV 373
            + KV  D  + + ++
Sbjct: 701 IKNKVPCDLQVYTSII 716



 Score =  157 bits (397), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 173/357 (48%), Gaps = 1/357 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T + ++    KEG  ++ +  F + KG  +  D   Y+ L+  +C   D N A  L  EM
Sbjct: 222 TLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEM 281

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
            + G  PS  T+  ++    K G   EA RL D MV   +  N     +LM G+C+ G +
Sbjct: 282 REFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDV 341

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           N A +LF  +   G   D V +++LING  K  ++E+A  LY  M   GI+P V   N+L
Sbjct: 342 NLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSL 401

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G  E + +EHA  LF+E     +  +  TYN  +  L + G + EA  L+  +     
Sbjct: 402 LEGFHEQNLLEHAYGLFDEAVEHGI-TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGI 460

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
              + +YN LI G CK G ++ A  + +S+  R L  + VTY ++I G    G  ++A  
Sbjct: 461 TPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFV 520

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +F  M    +AP    F T+I+G  +  + S+  + L+   ++  +  +   + ++D
Sbjct: 521 VFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIID 577



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 167/356 (46%), Gaps = 1/356 (0%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           +N ++    +   +  A   F  M   ++ P V   N+L+  +   N   +A++L+ EM+
Sbjct: 153 FNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMV 212

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           ++G+     T +V+M    K GK +E  +       R +  +A  YS L+   C    +N
Sbjct: 213 ERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLN 272

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A EL   M   G      +Y  +I    K     EAL L  EMVS G+   V+   +L 
Sbjct: 273 LACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLM 332

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            G   +  V  AL+LF+E+    V  D   ++  I+G  K G + +A EL+  + ++  +
Sbjct: 333 KGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQ 392

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            ++   N L++G  +   LE A  LF        + +VVTYNI++  L   G++++A +L
Sbjct: 393 PNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG-ITNVVTYNILLKWLGELGKVNEACNL 451

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +  M    + P+++ +  LI G  +     K   +L  + E+ + P+A   ++++D
Sbjct: 452 WEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLID 507



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 124/292 (42%), Gaps = 35/292 (11%)

Query: 50  DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
           D   +N L+      N   +A   F  M++  + P V   N ++  + +   + +A +L 
Sbjct: 149 DSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLY 208

Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
           D MV+R +  + +T   +M      GK    E+ F   +  G + D  +Y+IL+   C+ 
Sbjct: 209 DEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRR 268

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
            ++  A  L +EM   G  P+                                     TY
Sbjct: 269 LDLNLACELLKEMREFGWVPS-----------------------------------KGTY 293

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
              I    K G  VEA+ L   +  +   +++     L+ G C  G + +AL+LF  +  
Sbjct: 294 TAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVE 353

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
             +V DVV ++++I+G    G M+KA++L+  M+   + PNV I  +L+ GF
Sbjct: 354 GGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGF 405



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 35/259 (13%)

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G + D   +N L+  + +  ++ +A+  +R M+   + P V   N L   +   + V  A
Sbjct: 145 GFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDA 204

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
            +L++EM    +  D  T +  +    K G   E  + F+       E+D  AY+ L+  
Sbjct: 205 RQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQA 264

Query: 271 LCKSGRLEIALELFRSL------PRR-----VLVA------------------------D 295
           +C+   L +A EL + +      P +     V+VA                        +
Sbjct: 265 VCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMN 324

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           V+    ++ G C  G ++ A  LF ++ E  V P+V+IF  LI+G  ++    K  EL  
Sbjct: 325 VIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYT 384

Query: 356 KMKEKKVMPDASIVSMVVD 374
           +MK   + P+  IV+ +++
Sbjct: 385 RMKLMGIQPNVFIVNSLLE 403


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 190/400 (47%), Gaps = 41/400 (10%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN +TYN ++ GLC+ G + +  AL  +M  + + PD  TY+ L  GL    D      
Sbjct: 130 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 189

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF + +  GV     T +++++ LCK+GK+  A  +L  +V   + P    Y+TL++G+C
Sbjct: 190 LFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYC 249

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            TG++  A   FG M+S   K D ++YN LING CK + +  A  L  EM   G+ PTV 
Sbjct: 250 QTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVE 309

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV------ 246
           T+NTL        Q+E    +  EMQ + +  +  +Y + ++  CKNG I EAV      
Sbjct: 310 TFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM 369

Query: 247 --------------------------------ELFRTLGILKCELDIQAYNCLIDGLCKS 274
                                           E  ++ GI      I  YN LI GLC  
Sbjct: 370 FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGI---SPSIVTYNLLIKGLCNQ 426

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            ++  A E+  SL    L+ D V+YN +I   C  G +DKA DL   M +  +   V  +
Sbjct: 427 SQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 486

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             LI G     + +++  L  KM +  V+P  +I +++V+
Sbjct: 487 HQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVE 526



 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 182/357 (50%), Gaps = 2/357 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  +YN +I G+ + G    A  +F +M    + P+ +TYN++I G     D     RL
Sbjct: 61  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+  G++P+ +T+NV++  LC+ G+M E S LLD M  + + P+ FTYS L DG   
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 180

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G       LFG     G    D + +IL+NG CK+ +V  A  + + +V+ G+ PT V 
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 240

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G  +  ++E A   F +M+   +  D  TYN  I+GLCK   I  A +L   + 
Sbjct: 241 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 300

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  ++ +N LID   ++G+LE    +   +    L  +VV+Y  +++  C +G++ 
Sbjct: 301 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 360

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +A  +  DM    V PN  ++  +I  +V      +   L+ KMK   + P  SIV+
Sbjct: 361 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP--SIVT 415



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 177/344 (51%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T + +++GLCK+G V  A+ +   +    + P  V YN+LI+G C   +   A   F +M
Sbjct: 205 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 264

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
             + ++P  +T+N +++ LCK  ++  A  LL  M    V P   T++TL+D +  TG++
Sbjct: 265 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 324

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
            +   +   M+  G K + VSY  ++N +CKN ++ EA+++  +M  K + P    YN +
Sbjct: 325 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 384

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
                E    + A  L E+M+ + ++    TYN  I GLC    I EA E+  +L   + 
Sbjct: 385 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRL 444

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D  +YN LI   C  G ++ AL+L + + +  + + V TY+ +I GL   G++++   
Sbjct: 445 IPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEY 504

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           L+  M +N V P+  I   ++  + +     K  +L  +M +K+
Sbjct: 505 LYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 548



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 140/273 (51%), Gaps = 1/273 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ +TYN +I+GLCK   +  A+ L ++M+   +NP V T+N+LI          +   
Sbjct: 270 KPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFI 329

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM + G++P+VV++  I++  CKNGK+ EA  +LD M  +DV PNA  Y+ ++D + 
Sbjct: 330 VLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYV 389

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  ++A  L   M+S G     V+YN+LI G C   ++ EA  +   + +  + P  V
Sbjct: 390 EHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAV 449

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNTL         ++ AL L + M +  + +   TY+  I GL   G + E   L++ +
Sbjct: 450 SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKM 509

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
                      +N +++   K G  EI  E  R
Sbjct: 510 MQNNVVPSNAIHNIMVEAYSKYGN-EIKAEDLR 541



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 86/172 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   YN IID   + G  D+A  L  +MK   I+P +VTYN LI GLC+ +  +EA+ +
Sbjct: 376 PNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEI 435

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              + +  + P  V++N ++   C  G +D+A  L   M +  ++    TY  L+ G   
Sbjct: 436 INSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGG 495

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            G++N  E L+  M        +  +NI++  Y K     +A  L +EM+ K
Sbjct: 496 AGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 547



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 76/145 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ VTYN +I GLC +  + +A+ +   +    + PD V+YN+LI   C+  + ++A  
Sbjct: 410 SPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 469

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M   G++ +V T++ ++  L   G+++E   L   M+Q +V P+   ++ +++ + 
Sbjct: 470 LQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYS 529

Query: 133 LTGKINRAEELFGSMESMGCKHDDV 157
             G   +AE+L   M      HDD 
Sbjct: 530 KYGNEIKAEDLRKEMLQKRNNHDDT 554


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 191/362 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY  +ID LC    +D AK +F +MK     PD VTY +L+       D +  K
Sbjct: 289 CGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVK 348

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           + + EM   G  P VVTF +++D LCK G   EA   LD+M  + + PN  TY+TL+ G 
Sbjct: 349 QFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGL 408

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +++ A ELFG+MES+G K    +Y + I+ Y K+ +   AL  + +M +KGI P +
Sbjct: 409 LRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNI 468

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V  N     L +  +   A ++F  ++   +  D+ TYN  +    K G I EA++L   
Sbjct: 469 VACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSE 528

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    CE D+   N LI+ L K+ R++ A ++F  +    L   VVTYN ++ GL  +G+
Sbjct: 529 MMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK 588

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + +A +LF  M +    PN I F TL     + ++ +  +++L KM +   +PD    + 
Sbjct: 589 IQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNT 648

Query: 372 VV 373
           ++
Sbjct: 649 II 650



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 115/352 (32%), Positives = 181/352 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TY++++ GL K   +D    L  +M+   + P+V T+   I  L  A   NEA  
Sbjct: 220 RPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYE 279

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M D+G  P VVT+ V++D LC   K+D A  + + M     +P+  TY TL+D F 
Sbjct: 280 ILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFS 339

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               ++  ++ +  ME  G   D V++ IL++  CK     EA      M  +GI P + 
Sbjct: 340 DNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLH 399

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GL  +H+++ AL+LF  M+   V     TY  FID   K+G  V A+E F  +
Sbjct: 400 TYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM 459

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +I A N  +  L K+GR   A ++F  L    LV D VTYN+M+      G++
Sbjct: 460 KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 519

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           D+A  L  +M EN   P+VI+  +LI+   + ++  +  ++  +MKE K+ P
Sbjct: 520 DEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 175/330 (53%), Gaps = 1/330 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+  ++D LCK G   +A      M+ + I P++ TYN+LI GL   +  ++A  L
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEL 420

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   GV+P+  T+ V +D   K+G    A    + M  + + PN    +  +     
Sbjct: 421 FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK 480

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A+++F  ++ +G   D V+YN+++  Y K  E++EA+ L  EM+  G +P V+ 
Sbjct: 481 AGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIV 540

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            N+L   L++  +V+ A K+F  M+   +     TYNT + GL KNG I EA+ELF  + 
Sbjct: 541 VNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV 600

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  +   +N L D LCK+  + +AL++   +     V DV TYN +I GL  +GQ+ 
Sbjct: 601 QKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVK 660

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           +A   F  M++  V P+ +   TL+ G V+
Sbjct: 661 EAMCFFHQMKK-LVYPDFVTLCTLLPGVVK 689



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 176/327 (53%), Gaps = 4/327 (1%)

Query: 7    EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            ++GV  +P   TYN +I GL +   ++ A+ +FLQ+K     PDV TYN L+     +  
Sbjct: 778  DLGV--QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGK 835

Query: 67   WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDVRPNAFTYS 125
             +E   L+ EM     + + +T N+++  L K G +D+A  L  DLM  RD  P A TY 
Sbjct: 836  IDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG 895

Query: 126  TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
             L+DG   +G++  A++LF  M   GC+ +   YNILING+ K  E + A +L++ MV +
Sbjct: 896  PLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 955

Query: 186  GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            G++P + TY+ L   L  + +V+  L  F+E++   +  D   YN  I+GL K+  + EA
Sbjct: 956  GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015

Query: 246  VELFRTLGILK-CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
            + LF  +   +    D+  YN LI  L  +G +E A +++  + R  L  +V T+N +I 
Sbjct: 1016 LVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075

Query: 305  GLCNDGQMDKAHDLFLDMEENAVAPNV 331
            G    G+ + A+ ++  M     +PN 
Sbjct: 1076 GYSLSGKPEHAYAVYQTMVTGGFSPNT 1102



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 193/403 (47%), Gaps = 40/403 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VTYNT++ GL K G + +A  LF  M  +   P+ +T+N+L   LC  ++   A +
Sbjct: 570 KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALK 629

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           + F+MMD G  P V T+N I+  L KNG++ EA      M ++ V P+  T  TL+ G  
Sbjct: 630 MLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVV 688

Query: 133 LTGKINRA--------------------EELFGSMESMGCKHDDVSYN--ILING----- 165
               I  A                    E+L GS+ +     + VS++  ++ NG     
Sbjct: 689 KASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDG 748

Query: 166 ----------YCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
                      CK+  V  A +L+ +     G++P + TYN L  GL E   +E A  +F
Sbjct: 749 DSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF 808

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
            +++      D +TYN  +D   K+G I E  EL++ +   +CE +   +N +I GL K+
Sbjct: 809 LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKA 868

Query: 275 GRLEIALELFRSL-PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           G ++ AL+L+  L   R       TY  +I GL   G++ +A  LF  M +    PN  I
Sbjct: 869 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +  LI+GF +  +      L  +M ++ V PD    S++VD L
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971



 Score =  160 bits (405), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 203/395 (51%), Gaps = 43/395 (10%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA------- 64
            C P+  TYNTII GL K G V +A   F QMK + + PD VT  +L+ G+  A       
Sbjct: 639  CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAY 697

Query: 65   --------NDWNEAKRLFFE------MMDQGVQPSVVTFN--VIMDELCKNG-------- 100
                    N  ++   LF+E      + + G+  + V+F+  ++ + +C++G        
Sbjct: 698  KIITNFLYNCADQPANLFWEDLIGSILAEAGID-NAVSFSERLVANGICRDGDSILVPII 756

Query: 101  ----KMDEAS--RLLDLMVQRD--VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
                K +  S  R L     +D  V+P   TY+ L+ G      I  A+++F  ++S GC
Sbjct: 757  RYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGC 816

Query: 153  KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
              D  +YN L++ Y K+ +++E   LY+EM +   +   +T+N +  GL +   V+ AL 
Sbjct: 817  IPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALD 876

Query: 213  LFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            L+ ++  D D +    TY   IDGL K+G + EA +LF  +    C  +   YN LI+G 
Sbjct: 877  LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGF 936

Query: 272  CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
             K+G  + A  LF+ + +  +  D+ TY++++  LC  G++D+    F +++E+ + P+V
Sbjct: 937  GKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDV 996

Query: 332  IIFVTLIHGFVRINKPSKVIELLHKMKEKK-VMPD 365
            + +  +I+G  + ++  + + L ++MK  + + PD
Sbjct: 997  VCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPD 1031



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 168/359 (46%), Gaps = 3/359 (0%)

Query: 11   VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNE 69
            +C+        II   CK   V  A+ LF +  K   + P + TYN LI GL  A+    
Sbjct: 744  ICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEI 803

Query: 70   AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
            A+ +F ++   G  P V T+N ++D   K+GK+DE   L   M   +   N  T++ ++ 
Sbjct: 804  AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863

Query: 130  GFCLTGKINRAEELFGS-MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G    G ++ A +L+   M          +Y  LI+G  K+  + EA  L+  M+  G +
Sbjct: 864  GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR 923

Query: 189  PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
            P    YN L  G  +  + + A  LF+ M ++ V  D  TY+  +D LC  G + E +  
Sbjct: 924  PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983

Query: 249  FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP-RRVLVADVVTYNIMIHGLC 307
            F+ L       D+  YN +I+GL KS RLE AL LF  +   R +  D+ TYN +I  L 
Sbjct: 984  FKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG 1043

Query: 308  NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              G +++A  ++ +++   + PNV  F  LI G+    KP     +   M      P+ 
Sbjct: 1044 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNT 1102



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 179/362 (49%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  +YN +I  L K  F  +A  ++ +M  E   P + TY+SL+ GL    D +    L 
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM   G++P+V TF + +  L + GK++EA  +L  M      P+  TY+ L+D  C  
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            K++ A+E+F  M++   K D V+Y  L++ +  N++++     + EM   G  P VVT+
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF 366

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L   L +      A    + M+   +  +  TYNT I GL +   + +A+ELF  +  
Sbjct: 367 TILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L  +     Y   ID   KSG    ALE F  +  + +  ++V  N  ++ L   G+  +
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 486

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  +F  +++  + P+ + +  ++  + ++ +  + I+LL +M E    PD  +V+ +++
Sbjct: 487 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN 546

Query: 375 LL 376
            L
Sbjct: 547 TL 548



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 180/366 (49%), Gaps = 6/366 (1%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           + K +T TY TI   L  +G + +A     +M+      +  +YN LIH L  +    EA
Sbjct: 148 IIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEA 207

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             ++  M+ +G +PS+ T++ +M  L K   +D    LL  M    ++PN +T++  +  
Sbjct: 208 MEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRV 267

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               GKIN A E+   M+  GC  D V+Y +LI+  C  ++++ A  ++ +M +   KP 
Sbjct: 268 LGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA---VE 247
            VTY TL     +   ++   + + EM++D    D  T+   +D LCK G   EA   ++
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD 387

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           + R  GIL    ++  YN LI GL +  RL+ ALELF ++    +     TY + I    
Sbjct: 388 VMRDQGILP---NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG 444

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G    A + F  M+   +APN++     ++   +  +  +  ++ + +K+  ++PD+ 
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504

Query: 368 IVSMVV 373
             +M++
Sbjct: 505 TYNMMM 510



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 188/408 (46%), Gaps = 52/408 (12%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ +  N++I+ L K   VD+A  +F++MK   + P VVTYN+L+ GL       EA 
Sbjct: 534 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAI 593

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M+ +G  P+ +TFN + D LCKN ++  A ++L  M+     P+ FTY+T++ G 
Sbjct: 594 ELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL 653

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE----------------- 174
              G++  A   F  M+ +    D V+   L+ G  K   +E+                 
Sbjct: 654 VKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPA 712

Query: 175 -------------------ALSLYREMVSKGIKP-------TVVTYNTLFLGLFEIHQVE 208
                              A+S    +V+ GI          ++ Y+       + + V 
Sbjct: 713 NLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSC------KHNNVS 766

Query: 209 HALKLFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
            A  LFE+  +D  V     TYN  I GL +   I  A ++F  +    C  D+  YN L
Sbjct: 767 GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFL 826

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD-MEENA 326
           +D   KSG+++   EL++ +      A+ +T+NI+I GL   G +D A DL+ D M +  
Sbjct: 827 LDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 886

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +P    +  LI G  +  +  +  +L   M +    P+ +I +++++
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 166/362 (45%), Gaps = 36/362 (9%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASR 107
           PD+ +   +  GL    D + +   F  +     +  +  T N +++ L  +GK++E + 
Sbjct: 80  PDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAY 139

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
           + DLM +R ++ +  TY T+     + G + +A      M   G   +  SYN LI+   
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           K++   EA+ +YR M+ +G +P++ TY++L +GL +   ++  + L +EM+   +  +  
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY 259

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF--- 284
           T+   I  L + G I EA E+ + +    C  D+  Y  LID LC + +L+ A E+F   
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM 319

Query: 285 ---RSLPRRVL-----------------------------VADVVTYNIMIHGLCNDGQM 312
              R  P RV                              V DVVT+ I++  LC  G  
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 379

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A D    M +  + PN+  + TLI G +R+++    +EL   M+   V P A    + 
Sbjct: 380 GEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVF 439

Query: 373 VD 374
           +D
Sbjct: 440 ID 441



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 122/255 (47%), Gaps = 37/255 (14%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQ-MKGENINPDVVTYNSLIHGLCHANDWNEA 70
            C+ NT+T+N +I GL K G VD A  L+   M   + +P   TY  LI GL  +    EA
Sbjct: 851  CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA 910

Query: 71   KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            K+LF  M+D G +P+   +N++++   K G+ D A  L   MV+  VRP+  TYS L+D 
Sbjct: 911  KQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDC 970

Query: 131  FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK----- 185
             C+ G+++     F  ++  G   D V YN++ING  K+  +EEAL L+ EM +      
Sbjct: 971  LCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITP 1030

Query: 186  -------------------------------GIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
                                           G++P V T+N L  G     + EHA  ++
Sbjct: 1031 DLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVY 1090

Query: 215  EEMQRDDVAADTSTY 229
            + M     + +T TY
Sbjct: 1091 QTMVTGGFSPNTGTY 1105



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 105/187 (56%), Gaps = 1/187 (0%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            C+PN   YN +I+G  K G  D A ALF +M  E + PD+ TY+ L+  LC     +E  
Sbjct: 922  CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981

Query: 72   RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM-VQRDVRPNAFTYSTLMDG 130
              F E+ + G+ P VV +N+I++ L K+ +++EA  L + M   R + P+ +TY++L+  
Sbjct: 982  HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILN 1041

Query: 131  FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
              + G +  A +++  ++  G + +  ++N LI GY  + + E A ++Y+ MV+ G  P 
Sbjct: 1042 LGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101

Query: 191  VVTYNTL 197
              TY  L
Sbjct: 1102 TGTYEQL 1108



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 88/153 (57%), Gaps = 1/153 (0%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            +P+  TY+ ++D LC  G VD+    F ++K   +NPDVV YN +I+GL  ++   EA  
Sbjct: 958  RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALV 1017

Query: 73   LFFEM-MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM   +G+ P + T+N ++  L   G ++EA ++ + + +  + PN FT++ L+ G+
Sbjct: 1018 LFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1077

Query: 132  CLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
             L+GK   A  ++ +M + G   +  +Y  L N
Sbjct: 1078 SLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 1/239 (0%)

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNTL 197
           ++ +  GSM     K D  S   +  G     + + + S ++ +     +  T  T N +
Sbjct: 65  KSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYM 124

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
              L    ++E    +F+ MQ+  +  DT+TY T    L   G + +A    R +     
Sbjct: 125 LEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGF 184

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
            L+  +YN LI  L KS     A+E++R +        + TY+ ++ GL     +D    
Sbjct: 185 VLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMG 244

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           L  +ME   + PNV  F   I    R  K ++  E+L +M ++   PD    ++++D L
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 303


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 197/355 (55%), Gaps = 12/355 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V Y+T+++G  ++G VD A  L   + G    P+ + YN+ + GLC A  W +  
Sbjct: 278 CTPDVVIYSTLVNGFSEQGRVDDAIEL---LNGMLCKPNTICYNAALKGLCIAQRWEDVG 334

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  EM+ +   P+  TF+++   LC+NG +D A  +L+ M +   RP+A  Y+TL+  F
Sbjct: 335 QLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSF 394

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+++ A +L   + SM C  D +S+N  + G C+ +  ++A  L  +M+ +      
Sbjct: 395 SEQGRVDDALKL---LNSMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIE 451

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +T+N L   L +  +V +A+++FE+M +     D  TY++ I+GL + G +  A+ELF++
Sbjct: 452 MTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQS 511

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ DI  YN ++ GLC++ R E A EL  ++ R+    + +T+NI+I+ LC  G 
Sbjct: 512 M---PCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGL 568

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +D+A ++F  M +    P++  +  LI+GF    +      LL  M  K   PDA
Sbjct: 569 VDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCK---PDA 620



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 187/418 (44%), Gaps = 76/418 (18%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N VTY T+I+G C+ G +  A AL   M    + PD  TYN+++ GLC A  W +A+ L 
Sbjct: 179 NVVTYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEALM 235

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+     P+ VTF   +   C+NG +D A +LLD M Q    P+   YSTL++GF   
Sbjct: 236 AEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQ 295

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK--------- 185
           G+++ A EL   +  M CK + + YN  + G C  +  E+   L  EMV K         
Sbjct: 296 GRVDDAIEL---LNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATF 352

Query: 186 --------------------------GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ- 218
                                     G +P  V YNTL     E  +V+ ALKL   M  
Sbjct: 353 SMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMPC 412

Query: 219 -------------------------------RDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
                                          R+D      T+N  ID LC+NG +  A+E
Sbjct: 413 SPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIE 472

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +F  +    C  DI  Y+ LI+GL + G +E A+ELF+S+P +    D+  YN ++ GLC
Sbjct: 473 VFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCK---PDIFGYNAVLKGLC 529

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
              + + A +L  +M      PN I F  LI+   +     + IE+  +M +    PD
Sbjct: 530 RAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPD 587



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 180/357 (50%), Gaps = 9/357 (2%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G++CKPNT+ YN  + GLC     +    L ++M  ++  P+  T++ L   LC     +
Sbjct: 307 GMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVD 366

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A  +  +M   G +P  V +N ++    + G++D+A +LL+ M      P+  +++  +
Sbjct: 367 CAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSM---PCSPDVISFNAAL 423

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C   + + AEEL   M    C   ++++NILI+  C+N  V  A+ ++ +M   G  
Sbjct: 424 KGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCT 483

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P +VTY++L  GL E   VE A++LF+ M       D   YN  + GLC+     +A EL
Sbjct: 484 PDIVTYSSLINGLSEQGLVESAIELFQSM---PCKPDIFGYNAVLKGLCRAARWEDAGEL 540

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +    C  +   +N LI+ LC+ G ++ A+E+F  +P+     D+ TYN +I+G   
Sbjct: 541 ISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSE 600

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            G++D A  L   M   +  P+ + + + + G  R  +  +  E++ +M   K  P+
Sbjct: 601 QGRLDDARRLLSTM---SCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPN 654



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 159/323 (49%), Gaps = 9/323 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T++ +   LC+ G VD A  +  QM      PD V YN+LI+        ++A 
Sbjct: 345 CLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDAL 404

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M      P V++FN  +  LC+  + D+A  L+  M++ D      T++ L+D  
Sbjct: 405 KLLNSM---PCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSL 461

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++N A E+F  M   GC  D V+Y+ LING  +   VE A+ L++ M     KP +
Sbjct: 462 CQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM---PCKPDI 518

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             YN +  GL    + E A +L   M R D   +  T+N  I+ LC+ G +  A+E+F  
Sbjct: 519 FGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQ 578

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       DI  YN LI+G  + GRL+ A  L  ++  +    D V+YN  + GLC   +
Sbjct: 579 MPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCK---PDAVSYNSALKGLCRAER 635

Query: 312 MDKAHDLFLDMEENAVAPNVIIF 334
             +A ++  +M      PN + F
Sbjct: 636 WKEAEEVVAEMLRMKCPPNEVTF 658



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 172/391 (43%), Gaps = 38/391 (9%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR---- 72
           V  N +I  LC +  +  A+ +   +K      D V++N+L+ G C      +A+R    
Sbjct: 113 VACNILIKKLCAQRRLADAERVLDALKAAGAA-DPVSHNTLVAGYCRDGRLADAERLLAA 171

Query: 73  ---------LFFEMMDQG------------------VQPSVVTFNVIMDELCKNGKMDEA 105
                    + +  +  G                  V P   T+N ++  LC   + ++A
Sbjct: 172 AGLSGAANVVTYTTLINGYCRSGRLADALALIASMPVAPDTYTYNTVLMGLCGARQWEDA 231

Query: 106 SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILING 165
             L+  MV+    PN  T++T +  FC  G ++RA +L   M   GC  D V Y+ L+NG
Sbjct: 232 EALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNG 291

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
           + +   V++A+ L   M+    KP  + YN    GL    + E   +L  EM R D   +
Sbjct: 292 FSEQGRVDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPN 348

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
            +T++     LC+NG +  A+E+   +    C  D   YN LI    + GR++ AL+L  
Sbjct: 349 EATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLN 408

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
           S+P      DV+++N  + GLC   + D A +L + M         + F  LI    +  
Sbjct: 409 SMP---CSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNG 465

Query: 346 KPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + +  IE+  +M +    PD    S +++ L
Sbjct: 466 RVNNAIEVFEQMPKYGCTPDIVTYSSLINGL 496



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 108/191 (56%), Gaps = 9/191 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY+++I+GL ++G V+ A  LF  M      PD+  YN+++ GLC A  W +A 
Sbjct: 482 CTPDIVTYSSLINGLSEQGLVESAIELFQSMP---CKPDIFGYNAVLKGLCRAARWEDAG 538

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M  +   P+ +TFN++++ LC+ G +D A  + + M +    P+ FTY+ L++GF
Sbjct: 539 ELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGF 598

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+++ A  L   + +M CK D VSYN  + G C+ +  +EA  +  EM+     P  
Sbjct: 599 SEQGRLDDARRL---LSTMSCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNE 655

Query: 192 VTY---NTLFL 199
           VT+   N LF+
Sbjct: 656 VTFKYANRLFV 666



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 142/288 (49%), Gaps = 8/288 (2%)

Query: 86  VVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFG 145
           VV  N+++ +LC   ++ +A R+LD +       +  +++TL+ G+C  G++  AE L  
Sbjct: 112 VVACNILIKKLCAQRRLADAERVLDALKAAGA-ADPVSHNTLVAGYCRDGRLADAERLLA 170

Query: 146 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 205
           +    G   + V+Y  LINGYC++  + +AL+L   + S  + P   TYNT+ +GL    
Sbjct: 171 AAGLSG-AANVVTYTTLINGYCRSGRLADALAL---IASMPVAPDTYTYNTVLMGLCGAR 226

Query: 206 QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYN 265
           Q E A  L  EM R+    +  T+ T I   C+NG +  AV+L   +    C  D+  Y+
Sbjct: 227 QWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYS 286

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
            L++G  + GR++ A+EL   +   +   + + YN  + GLC   + +    L ++M   
Sbjct: 287 TLVNGFSEQGRVDDAIELLNGM---LCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRK 343

Query: 326 AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
              PN   F  L     +       +E+L +M +    PDA I + ++
Sbjct: 344 DCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLI 391



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 3/87 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN +I+G  ++G +D A+ L   M   +  PD V+YNS + GLC A  W EA+ +
Sbjct: 586 PDIFTYNALINGFSEQGRLDDARRLLSTM---SCKPDAVSYNSALKGLCRAERWKEAEEV 642

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNG 100
             EM+     P+ VTF         NG
Sbjct: 643 VAEMLRMKCPPNEVTFKYANRLFVPNG 669


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 198/377 (52%), Gaps = 20/377 (5%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +  TY  ++D  CK G +++A+  F +M+     P+VVTY +LIH    A   + A  LF
Sbjct: 476 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 535

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV-QRDV---------------R 118
             M+ +G  P++VT++ ++D  CK G++++A ++ + M   +DV               R
Sbjct: 536 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 595

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           PN  TY  L+DGFC + ++  A +L  +M   GC+ + + Y+ LI+G CK  +++EA  +
Sbjct: 596 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 655

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
             EM   G   T+ TY++L    F++ + + A K+  +M  +  A +   Y   IDGLCK
Sbjct: 656 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 715

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
            G   EA +L + +    C+ ++  Y  +IDG    G++E  LEL   +  + +  + VT
Sbjct: 716 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 775

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS-KVIELLHKM 357
           Y ++I   C +G +D AH+L  +M++     +   +  +I GF   NK   + + LL ++
Sbjct: 776 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF---NKEFIESLGLLDEI 832

Query: 358 KEKKVMPDASIVSMVVD 374
            +    P  S+  +++D
Sbjct: 833 GQDDTAPFLSVYRLLID 849



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 196/418 (46%), Gaps = 57/418 (13%)

Query: 14  PNTVTYNTIIDGLCKEG------FVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           P  V YN +I  +C +        +D A+  + +M    +  + +  +S    LC A  +
Sbjct: 364 PGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 423

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            +A  +  EM+ QG  P   T++ +++ LC   KM+ A  L + M +  +  + +TY+ +
Sbjct: 424 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 483

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D FC  G I +A + F  M  +GC  + V+Y  LI+ Y K K+V  A  L+  M+S+G 
Sbjct: 484 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 543

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEM--------------QRDDVA--ADTSTYNT 231
            P +VTY+ L  G  +  QVE A ++FE M              Q DD +   +  TY  
Sbjct: 544 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 603

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL-------- 283
            +DG CK+  + EA +L   + +  CE +   Y+ LIDGLCK G+L+ A E+        
Sbjct: 604 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 663

Query: 284 -------FRSLPRRVL--------------------VADVVTYNIMIHGLCNDGQMDKAH 316
                  + SL  R                        +VV Y  MI GLC  G+ D+A+
Sbjct: 664 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 723

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            L   MEE    PNV+ +  +I GF  I K    +ELL +M  K V P+     +++D
Sbjct: 724 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 781



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 177/344 (51%), Gaps = 4/344 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY  ++DG CK   V++A+ L   M  E   P+ + Y++LI GLC     +EA+ 
Sbjct: 595 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 654

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM + G   ++ T++ ++D   K  + D AS++L  M++    PN   Y+ ++DG C
Sbjct: 655 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 714

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK + A +L   ME  GC+ + V+Y  +I+G+    ++E  L L   M SKG+ P  V
Sbjct: 715 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 774

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L     +   ++ A  L EEM++      T+ Y   I+G   N   +E++ L   +
Sbjct: 775 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEI 832

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP--RRVLVADVVTYNIMIHGLCNDG 310
           G       +  Y  LID L K+ RLE+AL L   +      LV    TYN +I  LC   
Sbjct: 833 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 892

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           +++ A  LF +M +  V P +  F +LI G  R +K S+ + LL
Sbjct: 893 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 936



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 186/385 (48%), Gaps = 22/385 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TV Y  +I GLC+    ++A     +M+  +  P+VVTY++L+ G  +       KR+
Sbjct: 259 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 318

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              MM +G  PS   FN ++   C +G    A +LL  MV+    P    Y+ L+   C 
Sbjct: 319 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 378

Query: 134 TGK------INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
                    ++ AE+ +  M + G   + ++ +      C   + E+A S+ REM+ +G 
Sbjct: 379 DKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 438

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P   TY+ +   L    ++E A  LFEEM+R  + AD  TY   +D  CK G I +A +
Sbjct: 439 IPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 498

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            F  +  + C  ++  Y  LI    K+ ++  A ELF ++     + ++VTY+ +I G C
Sbjct: 499 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC 558

Query: 308 NDGQMDKAHDLF-----------LDM-----EENAVAPNVIIFVTLIHGFVRINKPSKVI 351
             GQ++KA  +F           +DM     ++N+  PNV+ +  L+ GF + ++  +  
Sbjct: 559 KAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEAR 618

Query: 352 ELLHKMKEKKVMPDASIVSMVVDLL 376
           +LL  M  +   P+  +   ++D L
Sbjct: 619 KLLDAMSMEGCEPNQIVYDALIDGL 643



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 168/320 (52%), Gaps = 5/320 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN + Y+ +IDGLCK G +D+A+ +  +M        + TY+SLI         + A 
Sbjct: 629 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 688

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++  +M++    P+VV +  ++D LCK GK DEA +L+ +M ++  +PN  TY+ ++DGF
Sbjct: 689 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 748

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            + GKI    EL   M S G   + V+Y +LI+  CKN  ++ A +L  EM         
Sbjct: 749 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 808

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y  +  G F    +E +L L +E+ +DD A   S Y   ID L K   +  A+ L   
Sbjct: 809 AGYRKVIEG-FNKEFIE-SLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 866

Query: 252 LGILKCEL-DIQA-YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           +      L D  + YN LI+ LC + ++E A +LF  + ++ ++ ++ ++  +I GL  +
Sbjct: 867 VATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRN 926

Query: 310 GQMDKAHDLFLDMEENAVAP 329
            ++ +A  L LD   + V P
Sbjct: 927 SKISEAL-LLLDFISHMVCP 945



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 165/369 (44%), Gaps = 11/369 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TYN +I    K   +D A  +  +M   N+  D  T     + LC    W EA  
Sbjct: 191 RPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALT 250

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   +  +   P  V +  ++  LC+    +EA   L+ M      PN  TYSTL+ G C
Sbjct: 251 L---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCG-C 306

Query: 133 LTGK-INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           L  K + R + +   M   GC      +N L++ YC + +   A  L ++MV  G  P  
Sbjct: 307 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 366

Query: 192 VTYNTLFLGL------FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           V YN L   +           ++ A K + EM    V  +    ++F   LC  G   +A
Sbjct: 367 VVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 426

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             + R +       D   Y+ +++ LC + ++E+A  LF  + R  LVADV TY IM+  
Sbjct: 427 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 486

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            C  G +++A   F +M E    PNV+ +  LIH +++  K S   EL   M  +  +P+
Sbjct: 487 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 546

Query: 366 ASIVSMVVD 374
               S ++D
Sbjct: 547 IVTYSALID 555



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/329 (21%), Positives = 127/329 (38%), Gaps = 9/329 (2%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           YN+L+  +   +D    +    ++ D   +      NV++ + C+NG    A   L  + 
Sbjct: 127 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSIALEELGRLK 186

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
               RP+  TY+ L+  F    +++ A  +   M     + D  +        CK  +  
Sbjct: 187 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR 246

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           EAL+L     ++   P  V Y  L  GL E    E A+     M+      +  TY+T +
Sbjct: 247 EALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 303

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
            G      +     +   + +  C    + +N L+   C SG    A +L + + +   +
Sbjct: 304 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 363

Query: 294 ADVVTYNIMIHGLCNDGQ------MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
              V YNI+I  +C D        +D A   + +M    V  N I   +         K 
Sbjct: 364 PGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 423

Query: 348 SKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            K   ++ +M  +  +PD S  S V++ L
Sbjct: 424 EKAFSVIREMIGQGFIPDTSTYSKVLNYL 452


>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
          Length = 466

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 180/354 (50%), Gaps = 9/354 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VT+ T I   C+ G +D+A  L  QM      PDVV Y++LI+G       ++A 
Sbjct: 38  CPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQAL 97

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M+    +P+ V +N  +  LC   + ++   L+  MV++   PN  T+S L+   
Sbjct: 98  DLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSL 154

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    ++ A E+   ME  GC+ D V+YNI+IN   +   V++AL L   MV    KP  
Sbjct: 155 CQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVC---KPDA 211

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           + +N +  G     +   A +L  +M RDD      T+N  ID LC+NG +  A ++F  
Sbjct: 212 LGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQ 271

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +C  DI  Y+ L++G  + G +E+A++LFRS+P +    D+ +YN ++ GLC   +
Sbjct: 272 MPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAAR 328

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            + A +L  +M      PN + F  LI+   +     + IE+L +M      PD
Sbjct: 329 WEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPD 382



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 180/356 (50%), Gaps = 9/356 (2%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           ++CKPNTV YN  + GLC     +    L  +M  +  +P+  T++ LI  LC  N  + 
Sbjct: 103 MLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDS 162

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +  +M   G +P  V +N+I++ L + G++D+A RLL+ MV    +P+A  ++ ++ 
Sbjct: 163 AVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLK 219

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GFC   + + A EL   M    C   ++++NILI+  C+N  V  A  ++ +M      P
Sbjct: 220 GFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTP 279

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            +VTY++L  G  E   VE A++LF  M       D  +YN  + GLC+     +A EL 
Sbjct: 280 DIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELI 336

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +    C  +   +N LI+ LC+ G ++ A+E+   +P      D+ TYN +I+G    
Sbjct: 337 AEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQ 396

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           G++D A  L   M   +  P+ I + + + G  R  +     EL+ +M   K  P+
Sbjct: 397 GRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPN 449



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 161/328 (49%), Gaps = 9/328 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T++ +I  LC+   VD A  +  QM+     PD V YN +I+ L      ++A 
Sbjct: 140 CSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDAL 199

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL   M+    +P  + FN ++   C+  +  +AS L+  M + D      T++ L+D  
Sbjct: 200 RLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDML 256

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +N A ++F  M    C  D V+Y+ L+NG+ +   VE A+ L+R M     KP +
Sbjct: 257 CQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDI 313

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +YN +  GL    + E A +L  EM   D   +  T+N  I+ LC+ G +  A+E+   
Sbjct: 314 FSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQ 373

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       DI  YN LI+G  + GRL+ AL+L  ++  +    D ++YN  + GLC   +
Sbjct: 374 MPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRAER 430

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIH 339
              A +L  +M  N   PN + F    H
Sbjct: 431 WQDAEELVAEMLRNKCTPNEVTFKYANH 458



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 3/117 (2%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G  C PN VT+N +I+ LC++G VD+A  +  QM      PD+ TYN+LI+G       
Sbjct: 340 VGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRL 399

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
           ++A +L   M     +P  +++N  +  LC+  +  +A  L+  M++    PN  T+
Sbjct: 400 DDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 453


>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 191/363 (52%), Gaps = 3/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+N +ID L K   V++A  +F  M   N++PDV TY  LI  L      +   +L
Sbjct: 98  PDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKL 157

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M  QG QP++ T++ +M      G++DEA  +   MVQ+ ++P+A TY+ L+D F  
Sbjct: 158 FESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGK 217

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG++ RA +  G   S     ++V+YN L++   +  +++  + L+ +M +KG+    +T
Sbjct: 218 TGQLERAFDFVGKSRSF---TNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELT 274

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L   L    +VE   +L+ EM  +D+  D  T N  +D L K G +  A ELF+ + 
Sbjct: 275 YAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMK 334

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D   YN LI+GL ++G+L+ A  L   +       +++TYN +I        + 
Sbjct: 335 FKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLS 394

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  LFL+M+E  VAPNV+ + +LI GF +  +    I L  +MK +   P+    ++++
Sbjct: 395 AATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLI 454

Query: 374 DLL 376
           D L
Sbjct: 455 DCL 457



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 196/397 (49%), Gaps = 38/397 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +T  +NT+I    +   ++KA         E   P   TY+S+I       D      
Sbjct: 27  KLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLL 86

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++ +M+     P   TFN+++D L K  +++EA  +   M + +V P+ +TY+ L+    
Sbjct: 87  MYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLG 146

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+I+   +LF SM + GC+ +  +Y+ +++ +     V+EA  ++++MV KG++P  V
Sbjct: 147 TIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAV 206

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF--- 249
           TYN L     +  Q+E A   F+ + +     +  TYN+ +  L + G I   +ELF   
Sbjct: 207 TYNILIDAFGKTGQLERA---FDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQM 263

Query: 250 RTLGILKCEL--------------------------------DIQAYNCLIDGLCKSGRL 277
           +  G++  EL                                DI   N ++D L K+GR+
Sbjct: 264 KAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRV 323

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           E A ELF+ +  + L AD VTYNI+I+GL   G++D A  L L+MEEN  APN+I + TL
Sbjct: 324 EAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTL 383

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           I  + + +  S    L  +MKE+ V P+    S +++
Sbjct: 384 ISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIE 420



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 148/308 (48%), Gaps = 32/308 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYN---------------- 55
           C+PN  TY++++      G VD+A  +F QM  + + PD VTYN                
Sbjct: 166 CQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAF 225

Query: 56  ----------------SLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKN 99
                           SL+  L    D      LF +M  +G+  + +T+ ++++ L   
Sbjct: 226 DFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWA 285

Query: 100 GKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
           G++++  +L   MV  D++ +  T + ++D     G++  A ELF  M+  G   D V+Y
Sbjct: 286 GRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTY 345

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           NILING  +  +++ A +L  EM   G  P ++TYNTL     +   +  A +LF EM+ 
Sbjct: 346 NILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKE 405

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
             VA +  +Y++ I+G  K G    A+ LFR +    C  +   YN LID L ++GR   
Sbjct: 406 RGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGA 465

Query: 280 ALELFRSL 287
           A+E  R +
Sbjct: 466 AMEYLREM 473



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 130/245 (53%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N VTYN+++  L ++G +     LF QMK + +  + +TY  LI  L  A    +  +L+
Sbjct: 236 NEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLY 295

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+D  ++  +VT N ++D L K G+++ A  L   M  + +  +  TY+ L++G    
Sbjct: 296 LEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRA 355

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK++ A  L   ME  GC  + ++YN LI+ Y K   +  A  L+ EM  +G+ P VV+Y
Sbjct: 356 GKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSY 415

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           ++L  G  +  + + A+ LF EM+ +    +  TYN  ID L + G    A+E  R +  
Sbjct: 416 SSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRD 475

Query: 255 LKCEL 259
             C++
Sbjct: 476 AGCQM 480



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/344 (22%), Positives = 158/344 (45%), Gaps = 3/344 (0%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
           D  + L   M+ +    D   +N+LIH    AN   +A +       +G +P+  T++ +
Sbjct: 12  DDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSM 71

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           +    K G +     +   M++    P+  T++ L+D      ++  A  +FG M  +  
Sbjct: 72  IQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNV 131

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
             D  +Y ILI        ++  + L+  M ++G +P + TY+++        +V+ A  
Sbjct: 132 SPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACD 191

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           +F++M +  +  D  TYN  ID   K G +  A   F  +G  +   +   YN L+  L 
Sbjct: 192 IFQQMVQKGLQPDAVTYNILIDAFGKTGQLERA---FDFVGKSRSFTNEVTYNSLLSSLG 248

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           + G ++  +ELF  +  + LV++ +TY I+I  L   G+++    L+L+M +N +  +++
Sbjct: 249 RKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIV 308

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               ++    +  +     EL   MK K +  D    +++++ L
Sbjct: 309 TINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGL 352



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 107/204 (52%), Gaps = 2/204 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + VT N ++D L K G V+ A  LF  MK + +N D VTYN LI+GL  A   + A  
Sbjct: 304 KYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGA 363

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM + G  P+++T+N ++    K   +  A+RL   M +R V PN  +YS+L++GF 
Sbjct: 364 LLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFG 423

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+ + A  LF  M++ GC  + V+YN+LI+   +      A+   REM   G +   V
Sbjct: 424 KAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKV 483

Query: 193 TYNTLFLGLFEIHQVEHALKLFEE 216
           T + L         +E A   F+E
Sbjct: 484 TKSLLV--RIPPQYMEEAQSFFQE 505



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 142/316 (44%), Gaps = 3/316 (0%)

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           L  A  +++ +RL   M     +     FN ++    +   M++A + L    +   RP 
Sbjct: 5   LGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPT 64

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
           A+TYS+++  F   G +     ++  M       D  ++NILI+   K  +VEEA +++ 
Sbjct: 65  AYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFG 124

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           +M    + P V TY  L   L  I +++  +KLFE M       +  TY++ +      G
Sbjct: 125 DMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAG 184

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            + EA ++F+ +     + D   YN LID   K+G+LE A +    + +     + VTYN
Sbjct: 185 RVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDF---VGKSRSFTNEVTYN 241

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            ++  L   G +    +LF  M+   +  N + +  LI       +   V +L  +M + 
Sbjct: 242 SLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDN 301

Query: 361 KVMPDASIVSMVVDLL 376
            +  D   ++ V+D L
Sbjct: 302 DIKYDIVTINNVLDCL 317



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 15/129 (11%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN +TYNT+I    K   +  A  LFL+MK   + P+VV+Y+SLI G   A   + A 
Sbjct: 373 CAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAI 432

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM  +G  P+ VT+N+++D L + G+   A   L     R++R          D  
Sbjct: 433 SLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYL-----REMR----------DAG 477

Query: 132 CLTGKINRA 140
           C  GK+ ++
Sbjct: 478 CQMGKVTKS 486


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 182/364 (50%), Gaps = 1/364 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P T T N ++ G C+ G + KA  LFL M       +  +Y  LI GLC A    EA  
Sbjct: 215 EPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALV 274

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M   G  P+V  F  ++  LCK+G++ +A  L D M Q  V P+  TY+ ++ G+ 
Sbjct: 275 LFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYS 334

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++N A ++   ME  GC  DD +YN LI G C  K  EEA  L    V +G  PTVV
Sbjct: 335 KLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVV 393

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+  L  G     + + AL++  +M       D   +   I+ L K   + EA EL   +
Sbjct: 394 TFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI 453

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++  Y  +IDG CKSG+++IALE+ + + R     +  TYN +++GL  D ++
Sbjct: 454 SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKL 513

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            KA  L   M+++ + PNVI + TL+ G    +       L   M++  + PD    +++
Sbjct: 514 HKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVL 573

Query: 373 VDLL 376
            D L
Sbjct: 574 TDAL 577



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 185/363 (50%), Gaps = 4/363 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TYNT+I GLC +   ++A+ L      E   P VVT+ +LI+G C A  +++A 
Sbjct: 354 CHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDAL 412

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R+  +MM    +  +  F  +++ L K  ++ EA  LL+ +    + PN  TY++++DG+
Sbjct: 413 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGY 472

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +GK++ A E+   ME  GC+ +  +YN L+ G  K+K++ +A++L  +M   GI P V
Sbjct: 473 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 532

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY TL  G  + H  ++A +LFE M+++ +  D   Y    D LCK G   EA      
Sbjct: 533 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR 592

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
            G+    L    Y  LIDG  K+G  + A  L   +       D  TY++++H LC   +
Sbjct: 593 KGV---ALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 649

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A  +   M    +   +  +  LI   +R  K      + ++M      P A+  ++
Sbjct: 650 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTV 709

Query: 372 VVD 374
            ++
Sbjct: 710 FIN 712



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 189/379 (49%), Gaps = 21/379 (5%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN  TYN+++ GL K+  + KA AL  +M+ + I P+V+TY +L+ G C  +D++ A 
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552

Query: 72  RLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           RLF EMM+Q G++P    + V+ D LCK G+ +EA      +V++ V      Y+TL+DG
Sbjct: 553 RLF-EMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDG 608

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           F   G  + A  L   M   GC  D  +Y++L++  CK K + EAL +  +M  +GIK T
Sbjct: 609 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           +  Y  L   +    + +HA +++ EM         +TY  FI+  CK G + +A +L  
Sbjct: 669 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 728

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH------ 304
            +       D+  YN LIDG    G ++ A    + +       +  TY +++       
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 788

Query: 305 ----------GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
                     G+ N  ++D    L   M ++ + P V  + +LI GF +  +  +   LL
Sbjct: 789 LAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLL 848

Query: 355 HKMKEKKVMPDASIVSMVV 373
             M  K + P+  I ++++
Sbjct: 849 DHMCGKGLSPNEDIYTLLI 867



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 196/397 (49%), Gaps = 33/397 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N  +Y  +I GLC+   V +A  LFL MK +  +P+V  +  LI GLC +    +A+
Sbjct: 249 CQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 308

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M   GV PSV+T+N ++    K G+M++A ++ +LM +    P+ +TY+TL+ G 
Sbjct: 309 LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 368

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K   AEEL  +    G     V++  LINGYC  ++ ++AL +  +M+S   K  +
Sbjct: 369 C-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDL 427

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             +  L   L +  +++ A +L  E+  + +  +  TY + IDG CK+G +  A+E+ + 
Sbjct: 428 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 487

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ +   YN L+ GL K  +L  A+ L   + +  ++ +V+TY  ++ G C++  
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 547

Query: 312 MDKAHDLFLDMEENAVAPN--------------------------------VIIFVTLIH 339
            D A  LF  ME+N + P+                                 + + TLI 
Sbjct: 548 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLID 607

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           GF +         L+ +M ++   PD+   S+++  L
Sbjct: 608 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHAL 644



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 188/381 (49%), Gaps = 34/381 (8%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           YN  +  L +    +    ++ Q+  + + PD VTYN++I   C   D   A R F  ++
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLL 210

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           + G++P   T N ++   C+ G++ +A  L  +M     + N ++Y+ L+ G C    + 
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVR 270

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A  LF  M+  GC  +  ++  LI+G CK+  V +A  L+  M   G+ P+V+TYN + 
Sbjct: 271 EALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK-------------------- 238
           +G  ++ ++  ALK+ E M+++    D  TYNT I GLC                     
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTP 390

Query: 239 ---------NGYIV-----EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
                    NGY +     +A+ +   +   KC+LD+Q +  LI+ L K  RL+ A EL 
Sbjct: 391 TVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELL 450

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
             +    LV +V+TY  +I G C  G++D A ++   ME +   PN   + +L++G V+ 
Sbjct: 451 NEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKD 510

Query: 345 NKPSKVIELLHKMKEKKVMPD 365
            K  K + LL KM++  ++P+
Sbjct: 511 KKLHKAMALLTKMQKDGIIPN 531



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 170/354 (48%), Gaps = 3/354 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CK +   +  +I+ L K+  + +AK L  ++    + P+V+TY S+I G C +   + A 
Sbjct: 423 CKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIAL 482

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   M   G QP+  T+N +M  L K+ K+ +A  LL  M +  + PN  TY+TL+ G 
Sbjct: 483 EVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQ 542

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C     + A  LF  ME  G K D+ +Y +L +  CK    EEA S    +V KG+  T 
Sbjct: 543 CDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTK 599

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V Y TL  G  +    + A  L E M  +    D+ TY+  +  LCK   + EA+ +   
Sbjct: 600 VYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQ 659

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +   +  I AY  LID + + G+ + A  ++  +          TY + I+  C +G+
Sbjct: 660 MSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGR 719

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++ A DL L ME   VAP+V+ +  LI G   +    +    L +M      P+
Sbjct: 720 LEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 773



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 172/374 (45%), Gaps = 16/374 (4%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V Y T+IDG  K G  D A  L  +M  E   PD  TY+ L+H LC     NEA  +  +
Sbjct: 600 VYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQ 659

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M  +G++ ++  + +++DE+ + GK D A R+ + M     +P+A TY+  ++ +C  G+
Sbjct: 660 MSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGR 719

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +  AE+L   ME  G   D V+YNILI+G      ++ A S  + MV    +P   TY  
Sbjct: 720 LEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCL 779

Query: 197 LF----------------LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           L                  G++ + +++   +L E M +  +    +TY++ I G CK G
Sbjct: 780 LLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAG 839

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            + EA  L   +       +   Y  LI   C +   E AL     +        + +Y 
Sbjct: 840 RLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYR 899

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +++ GLCN+G  +K   LF D+ E     + + +  L  G ++        ++L  M+++
Sbjct: 900 LLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 959

Query: 361 KVMPDASIVSMVVD 374
                +   ++V +
Sbjct: 960 YCCISSQTYALVTN 973



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 145/330 (43%), Gaps = 16/330 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P++ TY+ ++  LCK+  +++A  +  QM    I   +  Y  LI  +      + AK
Sbjct: 630 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 689

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R++ EM   G +PS  T+ V ++  CK G++++A  L+  M +  V P+  TY+ L+DG 
Sbjct: 690 RMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGC 749

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK----------------EVEEA 175
              G I+RA      M    C+ +  +Y +L+    K                  E++  
Sbjct: 750 GHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDIT 809

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
             L   MV  G+ PTV TY++L  G  +  ++E A  L + M    ++ +   Y   I  
Sbjct: 810 WQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKC 869

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
            C   +  +A+     +     +  +++Y  L+ GLC  G  E    LF  L       D
Sbjct: 870 CCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHD 929

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
            V + I+  GL   G +D    +   ME+ 
Sbjct: 930 EVAWKILNDGLLKAGYVDICFQMLSIMEKR 959



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 120/268 (44%), Gaps = 16/268 (5%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY   I+  CKEG ++ A+ L L+M+ E + PDVVTYN LI G  H    + A  
Sbjct: 701 KPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFS 760

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNG----------------KMDEASRLLDLMVQRD 116
               M+    +P+  T+ +++  L K                  ++D   +LL+ MV+  
Sbjct: 761 TLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHG 820

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           + P   TYS+L+ GFC  G++  A  L   M   G   ++  Y +LI   C  K  E+AL
Sbjct: 821 LNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKAL 880

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           S    M   G +P + +Y  L +GL      E    LF ++       D   +    DGL
Sbjct: 881 SFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGL 940

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAY 264
            K GY+    ++   +    C +  Q Y
Sbjct: 941 LKAGYVDICFQMLSIMEKRYCCISSQTY 968



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 4/194 (2%)

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           +A+   R   S  +  +   YN     L      E+  +++ ++ +D +  DT TYNT I
Sbjct: 131 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 190

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNC--LIDGLCKSGRLEIALELFRSLPRRV 291
              CK G +  A   FR L  L+  L+ + + C  L+ G C++G L  A  LF  +P   
Sbjct: 191 KSYCKEGDLTTAHRCFRLL--LEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 248

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
              +  +Y I+I GLC    + +A  LFL M+ +  +PNV  F  LI G  +  +     
Sbjct: 249 CQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 308

Query: 352 ELLHKMKEKKVMPD 365
            L   M +  V+P 
Sbjct: 309 LLFDAMPQNGVVPS 322



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 3/163 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TY+++I G CK G +++A  L   M G+ ++P+   Y  LI   C    + +A   
Sbjct: 823 PTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSF 882

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M + G QP + ++ +++  LC  G  ++   L   +++     +   +  L DG   
Sbjct: 883 VSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLK 942

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
            G ++   ++   ME   C     +Y ++ N   K  EV  +L
Sbjct: 943 AGYVDICFQMLSIMEKRYCCISSQTYALVTN---KMHEVSSSL 982


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 112/331 (33%), Positives = 180/331 (54%), Gaps = 3/331 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVTYNSLIHGLCHANDWNEAK 71
           PN  TY T+I G CK G VD+A  +F +M  KGE + P+ V YN+LI G C     + A 
Sbjct: 179 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE-VKPEAVMYNALIGGYCDQGKLDTAL 237

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                M+++GV  +V T+N+++  L  +G+  EA  L++ M  + + P+ FTY+ L++G 
Sbjct: 238 LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGH 297

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + +A E+F +M   G +   V+Y  LI    K  +V+E   L+ E V +GI+P +
Sbjct: 298 CKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL 357

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YN L         ++ A ++  EM++  +A D  TYNT + GLC  G + EA +L   
Sbjct: 358 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 417

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D+  YN LI G    G ++ AL +   +  +     ++TYN +I GLC +GQ
Sbjct: 418 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 477

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
            D A ++  +M EN + P+   +++LI G  
Sbjct: 478 GDDAENMVKEMVENGITPDDSTYISLIEGLT 508



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 175/351 (49%), Gaps = 6/351 (1%)

Query: 16  TVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFF 75
           T T+N ++  LC  G   +A  L  QM      P+ VTYN++I G C       A  +  
Sbjct: 114 TTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMR 169

Query: 76  EMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR-DVRPNAFTYSTLMDGFCL 133
           EM ++ G+ P+  T+  ++   CK G++DEA ++ D M+ + +V+P A  Y+ L+ G+C 
Sbjct: 170 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 229

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A      M   G      +YN+L++    +    EA  L  EM  KG+ P V T
Sbjct: 230 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 289

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +   V+ AL++FE M R  V A   TY   I  L K G + E  +LF    
Sbjct: 290 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 349

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+  YN LI+    SG ++ A E+   + ++ +  D VTYN ++ GLC  G++D
Sbjct: 350 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 409

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           +A  L  +M E  + P+++ + TLI G+         + + ++M  K   P
Sbjct: 410 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 460



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 175/330 (53%), Gaps = 10/330 (3%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           L+ +MK  ++     + + L+  L  A     A  LF +M    +     TFN+++  LC
Sbjct: 70  LYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRHLC 125

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM-ESMGCKHDD 156
             GK    +R L+L+ Q   RPNA TY+T++ GFC  G++  A ++   M E  G   + 
Sbjct: 126 SAGK---PARALELLRQMP-RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQ 181

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKG-IKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
            +Y  +I+G+CK   V+EA+ ++ EM++KG +KP  V YN L  G  +  +++ AL   +
Sbjct: 182 YTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRD 241

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
            M    VA   +TYN  +  L  +G   EA EL   +G      D+  YN LI+G CK G
Sbjct: 242 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEG 301

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
            ++ ALE+F ++ RR + A VVTY  +I+ L   GQ+ +   LF +     + P+++++ 
Sbjct: 302 NVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYN 361

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            LI+         +  E++ +M++K++ PD
Sbjct: 362 ALINSHSTSGNIDRAFEIMGEMEKKRIAPD 391



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 87/159 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V YN +I+     G +D+A  +  +M+ + I PD VTYN+L+ GLC     +EA++
Sbjct: 354 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARK 413

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM ++G+QP +VT+N ++      G + +A R+ + M+ +   P   TY+ L+ G C
Sbjct: 414 LIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 473

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
             G+ + AE +   M   G   DD +Y  LI G     E
Sbjct: 474 KNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 512



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 102/213 (47%), Gaps = 22/213 (10%)

Query: 175 ALSLYREMVS--KGIKPTVVTY----------NTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           AL+L++ ++S  K + P  V            N L      +     +L+L+  M+   +
Sbjct: 20  ALALFKSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSL 79

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
              T++ +  +  L          ++FR    L+  L    +N ++  LC +G+   ALE
Sbjct: 80  PISTASLHPLLSALPSAPAFALFADMFR----LRLPLCTTTFNIMLRHLCSAGKPARALE 135

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN-AVAPNVIIFVTLIHGF 341
           L R +PR     + VTYN +I G C+ G++  A D+  +M E   +APN   + T+I G+
Sbjct: 136 LLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 191

Query: 342 VRINKPSKVIELLHKMKEK-KVMPDASIVSMVV 373
            ++ +  + +++  +M  K +V P+A + + ++
Sbjct: 192 CKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 224


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  200 bits (509), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 198/377 (52%), Gaps = 20/377 (5%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +  TY  ++D  CK G +++A+  F +M+     P+VVTY +LIH    A   + A  LF
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV-QRDV---------------R 118
             M+ +G  P++VT++ ++D  CK G++++A ++ + M   +DV               R
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           PN  TY  L+DGFC + ++  A +L  +M   GC+ + + Y+ LI+G CK  +++EA  +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
             EM   G   T+ TY++L    F++ + + A K+  +M  +  A +   Y   IDGLCK
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
            G   EA +L + +    C+ ++  Y  +IDG    G++E  LEL   +  + +  + VT
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS-KVIELLHKM 357
           Y ++I   C +G +D AH+L  +M++     +   +  +I GF   NK   + + LL ++
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF---NKEFIESLGLLDEI 873

Query: 358 KEKKVMPDASIVSMVVD 374
            +    P  S+  +++D
Sbjct: 874 GQDDTAPFLSVYRLLID 890



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 191/383 (49%), Gaps = 22/383 (5%)

Query: 14  PNTVTYNTIIDGLCKEG------FVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           P  V YN +I  +C +        +D A+  + +M    +  + +  +S    LC A  +
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            +A  +  EM+ QG  P   T++ +++ LC   KM+ A  L + M +  +  + +TY+ +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D FC  G I +A + F  M  +GC  + V+Y  LI+ Y K K+V  A  L+  M+S+G 
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEM--------------QRDDVA--ADTSTYNT 231
            P +VTY+ L  G  +  QVE A ++FE M              Q DD +   +  TY  
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            +DG CK+  + EA +L   + +  CE +   Y+ LIDGLCK G+L+ A E+   +    
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
             A + TY+ +I       + D A  +   M EN+ APNV+I+  +I G  ++ K  +  
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764

Query: 352 ELLHKMKEKKVMPDASIVSMVVD 374
           +L+  M+EK   P+    + ++D
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMID 787



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 177/344 (51%), Gaps = 4/344 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY  ++DG CK   V++A+ L   M  E   P+ + Y++LI GLC     +EA+ 
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM + G   ++ T++ ++D   K  + D AS++L  M++    PN   Y+ ++DG C
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK + A +L   ME  GC+ + V+Y  +I+G+    ++E  L L   M SKG+ P  V
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 815

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L     +   ++ A  L EEM++      T+ Y   I+G   N   +E++ L   +
Sbjct: 816 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEI 873

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP--RRVLVADVVTYNIMIHGLCNDG 310
           G       +  Y  LID L K+ RLE+AL L   +      LV    TYN +I  LC   
Sbjct: 874 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 933

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           +++ A  LF +M +  V P +  F +LI G  R +K S+ + LL
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 186/385 (48%), Gaps = 22/385 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TV Y  +I GLC+    ++A     +M+  +  P+VVTY++L+ G  +       KR+
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              MM +G  PS   FN ++   C +G    A +LL  MV+    P    Y+ L+   C 
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419

Query: 134 TGK------INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
                    ++ AE+ +  M + G   + ++ +      C   + E+A S+ REM+ +G 
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 479

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P   TY+ +   L    ++E A  LFEEM+R  + AD  TY   +D  CK G I +A +
Sbjct: 480 IPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            F  +  + C  ++  Y  LI    K+ ++  A ELF ++     + ++VTY+ +I G C
Sbjct: 540 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC 599

Query: 308 NDGQMDKAHDLF-----------LDM-----EENAVAPNVIIFVTLIHGFVRINKPSKVI 351
             GQ++KA  +F           +DM     ++N+  PNV+ +  L+ GF + ++  +  
Sbjct: 600 KAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEAR 659

Query: 352 ELLHKMKEKKVMPDASIVSMVVDLL 376
           +LL  M  +   P+  +   ++D L
Sbjct: 660 KLLDAMSMEGCEPNQIVYDALIDGL 684



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 162/306 (52%), Gaps = 4/306 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN + Y+ +IDGLCK G +D+A+ +  +M        + TY+SLI         + A 
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++  +M++    P+VV +  ++D LCK GK DEA +L+ +M ++  +PN  TY+ ++DGF
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            + GKI    EL   M S G   + V+Y +LI+  CKN  ++ A +L  EM         
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y  +  G F    +E +L L +E+ +DD A   S Y   ID L K   +  A+ L   
Sbjct: 850 AGYRKVIEG-FNKEFIE-SLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 907

Query: 252 LGILKCEL-DIQA-YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           +      L D  + YN LI+ LC + ++E A +LF  + ++ ++ ++ ++  +I GL  +
Sbjct: 908 VATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRN 967

Query: 310 GQMDKA 315
            ++ +A
Sbjct: 968 SKISEA 973



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 165/369 (44%), Gaps = 11/369 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TYN +I    K   +D A  +  +M   N+  D  T     + LC    W EA  
Sbjct: 232 RPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALT 291

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   +  +   P  V +  ++  LC+    +EA   L+ M      PN  TYSTL+ G C
Sbjct: 292 L---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCG-C 347

Query: 133 LTGK-INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           L  K + R + +   M   GC      +N L++ YC + +   A  L ++MV  G  P  
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 407

Query: 192 VTYNTLFLGL------FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           V YN L   +           ++ A K + EM    V  +    ++F   LC  G   +A
Sbjct: 408 VVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 467

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             + R +       D   Y+ +++ LC + ++E+A  LF  + R  LVADV TY IM+  
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            C  G +++A   F +M E    PNV+ +  LIH +++  K S   EL   M  +  +P+
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587

Query: 366 ASIVSMVVD 374
               S ++D
Sbjct: 588 IVTYSALID 596



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 101/239 (42%), Gaps = 35/239 (14%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN V Y  +IDGLCK G  D+A  L   M+ +   P+VVTY ++I G           
Sbjct: 740 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCL 799

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR---------------- 115
            L   M  +GV P+ VT+ V++D  CKNG +D A  LL+ M Q                 
Sbjct: 800 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 859

Query: 116 -----------------DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
                            D  P    Y  L+D      ++  A  L   + +      D S
Sbjct: 860 NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYS 919

Query: 159 --YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
             YN LI   C   +VE A  L+ EM  KG+ P + ++ +L  GLF   ++  AL L +
Sbjct: 920 STYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/329 (21%), Positives = 127/329 (38%), Gaps = 9/329 (2%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           YN+L+  +   +D    +    ++ D   +      NV++ + C+NG    A   L  + 
Sbjct: 168 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLK 227

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
               RP+  TY+ L+  F    +++ A  +   M     + D  +        CK  +  
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR 287

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           EAL+L     ++   P  V Y  L  GL E    E A+     M+      +  TY+T +
Sbjct: 288 EALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
            G      +     +   + +  C    + +N L+   C SG    A +L + + +   +
Sbjct: 345 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 404

Query: 294 ADVVTYNIMIHGLCNDGQ------MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
              V YNI+I  +C D        +D A   + +M    V  N I   +         K 
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464

Query: 348 SKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            K   ++ +M  +  +PD S  S V++ L
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYL 493



 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 2/107 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMK--GENINPDVVTYNSLIHGLCHANDWNEAK 71
           P    Y  +ID L K   ++ A  L  ++      +     TYNSLI  LC AN    A 
Sbjct: 880 PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAF 939

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR 118
           +LF EM  +GV P + +F  ++  L +N K+ EA  LLD +   +++
Sbjct: 940 QLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQ 986


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 120/363 (33%), Positives = 175/363 (48%), Gaps = 6/363 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN ++Y  ++  LC+ G +DKA +   +M  E + PDV TYN +I  LC A   + A 
Sbjct: 31  CKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAI 90

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             FFE M    +P VVT+N ++  LCKNG++ +A  L   M    + P+  TY+TL+D F
Sbjct: 91  E-FFETMP---EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVF 146

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +   A  L   M S  C     SY  +ING CKN++V++A  L+ EM   G KP  
Sbjct: 147 CKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDR 206

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNTL  GL    ++  A  L   M  +    D  T+   I+GLC    I EA  LF+ 
Sbjct: 207 VTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQG 266

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  D+  +  L+  LC   +L  AL + R+ P       V+ Y  +   L     
Sbjct: 267 MAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYP--ACPEAVILYTPIFRELGRRRG 324

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D+A  L   M    V PNV+ +     G     +  +      +M E+ + PD    ++
Sbjct: 325 FDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNV 384

Query: 372 VVD 374
           +VD
Sbjct: 385 LVD 387



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 184/393 (46%), Gaps = 37/393 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN +ID LCK   + +A   F  M      PDVVTYN+L+ GLC      +A  L
Sbjct: 68  PDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSL 123

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   G+ PS VT+  ++D  CK  + + A  LL LM  R   P  ++Y ++++G C 
Sbjct: 124 FGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCK 183

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+++A +LF  M+  GCK D V+YN LI+G C  + + EA  L   MV  G +P  +T
Sbjct: 184 NRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKIT 243

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC------------KN-G 240
           +  L  GL    +++ A  LF+ M +   A D  T+   +  LC            +N  
Sbjct: 244 FTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYP 303

Query: 241 YIVEAV----ELFRTLGILK----------------CELDIQAYNCLIDGLCKSGRLEIA 280
              EAV     +FR LG  +                   ++  Y     GL        A
Sbjct: 304 ACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRA 363

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
              FR +  + +  D+V YN+++ G C   ++D A  +   M+++ + PN++ + TL+  
Sbjct: 364 YREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGH 423

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
             R  K   + ELLH M  +   PD +  S +V
Sbjct: 424 HCRKGKVEAIGELLHTMVSRGRQPDVATWSTLV 456



 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 180/378 (47%), Gaps = 37/378 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYN----------------- 55
           +P+ VTYNT++ GLCK G V +A +LF  M+G  I P  VTY                  
Sbjct: 98  EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYG 157

Query: 56  ------------------SLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
                             S+I+GLC     ++A +LF EM   G +P  VT+N ++  LC
Sbjct: 158 LLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLC 217

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
              ++ EA  LL +MV+   +P+  T++ L++G C T +I  A  LF  M   GC  D V
Sbjct: 218 VKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLV 277

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           ++ +L++  C  +++  ALS+ R          V+ Y  +F  L      + A +L ++M
Sbjct: 278 THTVLVSKLCILRKLRPALSVVRNY--PACPEAVILYTPIFRELGRRRGFDRAARLLQKM 335

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
            R  V  +  TY  F  GL      + A   FR +     E D+ AYN L+DG CK+ RL
Sbjct: 336 ARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRL 395

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           ++A ++ R + +  L  ++VTYN ++   C  G+++   +L   M      P+V  + TL
Sbjct: 396 DMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTL 455

Query: 338 IHGFVRINKPSKVIELLH 355
           + G   + +       L+
Sbjct: 456 VAGLFMVGQADAAYSFLN 473



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 159/318 (50%), Gaps = 7/318 (2%)

Query: 52  VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL 111
           VT N+L+  L  A    +   +F  +  Q  +P+ +++  ++  LC+ GK+D+A   +  
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           M +  + P+ FTY+ ++D  C   +I+RA E F +M     + D V+YN L+ G CKN  
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGR 116

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           V +A SL+  M   GI P+ VTY TL     ++ Q E A  L + M     +    +Y +
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            I+GLCKN  + +A +LF  + +  C+ D   YN LI GLC   RL  A +L   +    
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENG 236

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
              D +T+  +I GLC   ++ +A  LF  M +   AP+++    L+     + K    +
Sbjct: 237 FQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPAL 296

Query: 352 ELLHKMKEKKVMPDASIV 369
            ++   +     P+A I+
Sbjct: 297 SVV---RNYPACPEAVIL 311



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 141/290 (48%), Gaps = 4/290 (1%)

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
           VT N ++D L +  + ++   +   +  +D +PNA +Y  L+   C TGKI++A      
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M       D  +YN++I+  CK + +  A+  +  M     +P VVTYNTL  GL +  +
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGR 116

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           V  A  LF  M+   +     TY T ID  CK      A  L + +   KC   + +Y  
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           +I+GLCK+ +++ A +LF  +       D VTYN +IHGLC   ++ +A DL   M EN 
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENG 236

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             P+ I F  LI G    ++  +   L   M ++   PD    +++V  L
Sbjct: 237 FQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKL 286



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 6/179 (3%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE- 69
            C    + Y  I   L +    D+A  L  +M    + P+VVTY +   GL    DW E 
Sbjct: 304 ACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGL---GDWKEG 360

Query: 70  --AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A R F  M++QG++P +V +NV++D  CK  ++D A +++  M Q  + PN  TY+TL
Sbjct: 361 MRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTL 420

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           +   C  GK+    EL  +M S G + D  +++ L+ G     + + A S     +S+G
Sbjct: 421 VGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 188/353 (53%), Gaps = 5/353 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           ++VTYN +I G C    +D A +L  +M  E +  +  T + ++ GLC      +A   F
Sbjct: 24  SSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHF 83

Query: 75  FEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-VRPNAFTYSTLMDGFC 132
              ++    QP VV++  +++ LCK G++D A  L   MV     RPNAFTY+ L+DG C
Sbjct: 84  DASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLC 143

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +++ A  +           D V+YN L+    +   V+EAL+ + +M  +G  PT+V
Sbjct: 144 KQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLV 203

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           ++N +  GL    ++  AL++F EM   D   +  TY+  IDGLCK+  + EA +L   +
Sbjct: 204 SFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRM 263

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D+ AY  L+ G   +GRL+ AL L R +  +  + DVVTY ++I  LC  G++
Sbjct: 264 VSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRV 323

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           D AH++F ++  N  +PNV+ +  LI G+ R    S+V E    M+E    P+
Sbjct: 324 DDAHEIFRELVANKCSPNVVTYSALIGGYCR---ASRVDEGGKVMREMACRPN 373



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 179/340 (52%), Gaps = 4/340 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNEAK 71
           +P+ V+Y T+I+GLCK G VD A  LF +M       P+  TYN+L+ GLC  +  + A+
Sbjct: 93  QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAAR 152

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  E   +   P VVT+N +M  L + G++DEA      M +    P   +++ ++ G 
Sbjct: 153 AVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGL 212

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++  A E+F  M       + V+Y+++I+G CK+ +++EA  L   MVS+G +P +
Sbjct: 213 CRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDL 272

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V Y  L LG     +++ AL L   M       D  TY   ID LCK G + +A E+FR 
Sbjct: 273 VAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRE 332

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L   KC  ++  Y+ LI G C++ R++   ++ R +  R    +VVTYN MI GL    +
Sbjct: 333 LVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDR 389

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
            ++A+ +F +M E    P+   +  L      I++P  V+
Sbjct: 390 NEEAYGMFREMSECGFVPDARTYRGLKRALRMIDQPPHVL 429



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 164/295 (55%), Gaps = 3/295 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN  TYN ++DGLCK+  +D A+A+  + +  +  PDVVTYN+L+  L      +EA 
Sbjct: 128 CRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEAL 187

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             F +M ++G  P++V+FN I+  LC+  ++ +A  + + M+ RD  PN  TYS ++DG 
Sbjct: 188 ATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGL 247

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C + +++ A++L   M S GC+ D V+Y  L+ G+     ++ AL L R MVS+G  P V
Sbjct: 248 CKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDV 307

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY  +   L ++ +V+ A ++F E+  +  + +  TY+  I G C+   + E  ++ R 
Sbjct: 308 VTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMRE 367

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +    C  ++  YN +I GL    R E A  +FR +     V D  TY  +   L
Sbjct: 368 MA---CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 184/354 (51%), Gaps = 5/354 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALF-LQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           N  T + I+ GLC+ G V +A   F   ++  +  PDVV+Y +LI+GLC     + A  L
Sbjct: 59  NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 118

Query: 74  FFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           F +M+  G  +P+  T+N ++D LCK  ++D A  ++    +RD  P+  TY+TLM    
Sbjct: 119 FRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALF 178

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ A   F  M   G     VS+N +I G C+ + + +AL ++ EM+ +   P +V
Sbjct: 179 QLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLV 238

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ +  GL +  Q++ A +L + M  +    D   Y   + G    G +  A+ L R +
Sbjct: 239 TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 298

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D+  Y  +ID LCK GR++ A E+FR L       +VVTY+ +I G C   ++
Sbjct: 299 VSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRV 358

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           D+   +   M E A  PNV+ + T+I G   +++  +   +  +M E   +PDA
Sbjct: 359 DEGGKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDA 409



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 164/316 (51%), Gaps = 3/316 (0%)

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
            A   N+A +LF E   Q +  S VT+NV++   C    +D A  LL  M    ++ N  
Sbjct: 3   RAGSHNQALQLFRENPCQ-LPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDR 61

Query: 123 TYSTLMDGFCLTGKINRAEELF-GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 181
           T S ++ G C  G++ +A E F  S+E    + D VSY  LING CK   V+ A  L+R+
Sbjct: 62  TTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRK 121

Query: 182 MVSKG-IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           MV+ G  +P   TYN L  GL +  +++ A  +  E ++ D A D  TYNT +  L + G
Sbjct: 122 MVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLG 181

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            + EA+  F  +        + ++N +I GLC++ RL  ALE+F  +  R    ++VTY+
Sbjct: 182 RVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYS 241

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           ++I GLC   Q+D+A  L   M      P+++ +  L+ GF    +    + LL +M  +
Sbjct: 242 VVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQ 301

Query: 361 KVMPDASIVSMVVDLL 376
             +PD    ++V+D L
Sbjct: 302 GCIPDVVTYTVVIDKL 317



 Score = 39.7 bits (91), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 27/52 (51%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGL 61
           + C+PN VTYNT+I GL      ++A  +F +M      PD  TY  L   L
Sbjct: 368 MACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 188/354 (53%), Gaps = 4/354 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  +TY  ++ GLC+    D+A+A+  ++   N    VV +N++I G        EA 
Sbjct: 276 CMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN----VVLFNTVIGGCLAEGKLAEAT 331

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L+  M  +G QP   T++++M  LCK G++  A RLL  M ++   PN  TY+ ++  F
Sbjct: 332 ELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSF 391

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G  +    L   M + G   +   YN +I   CK+  ++EA+ L +EM S+G  P +
Sbjct: 392 CKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDI 451

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +YNT+   L    Q+E A  +FE +  + V A+  TYNT I  L ++G   +AV L + 
Sbjct: 452 CSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKE 511

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +  C LD+ +YN LI  +CK G ++ +L L   +  + +  + V+YNI+I  LC + +
Sbjct: 512 MILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERR 571

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +  A +L   M    +AP+++ + TLI+G  ++      + LL K+  + V PD
Sbjct: 572 VRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 625



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 178/338 (52%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G V + N V +NT+I G   EG + +A  L+  M  +   PD  TY+ L+HGLC     
Sbjct: 303 LGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRI 362

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A RL  EM  +G  P+VVT+ +++   CKNG  D+   LL+ M  + +  N+  Y+ +
Sbjct: 363 GSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGM 422

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +   C  G+++ A  L   M S GC  D  SYN +I   C N+++EEA  ++  ++ +G+
Sbjct: 423 IYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGV 482

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
               +TYNT+   L    + + A++L +EM     + D  +YN  I  +CK+G +  ++ 
Sbjct: 483 VANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLV 542

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +     + +  +YN LI  LCK  R+  ALEL + +  + L  D+VTYN +I+GLC
Sbjct: 543 LLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLC 602

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
             G M  A +L   +    V P++I +  LI    ++ 
Sbjct: 603 KMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVR 640



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 171/345 (49%), Gaps = 4/345 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P T T+      LC+ G  D+A AL   M      PD V Y ++IH LC      EA  
Sbjct: 172 PPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAAT 231

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+  G    V TF+ ++  +C  G++ EA+RL+D M+ +   P   TY  L+ G C
Sbjct: 232 LLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLC 291

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              + + A  + G +  +    + V +N +I G     ++ EA  LY  M  KG +P   
Sbjct: 292 RVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAH 347

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L  GL ++ ++  A++L  EM++   A +  TY   +   CKNG   +   L   +
Sbjct: 348 TYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEM 407

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 L+ Q YN +I  LCK GR++ A+ L + +  +    D+ +YN +I+ LCN+ QM
Sbjct: 408 SAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQM 467

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           ++A  +F ++ E  V  N I + T+IH  +R  +    + L  +M
Sbjct: 468 EEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM 512



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 155/321 (48%), Gaps = 5/321 (1%)

Query: 46  NINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDE 104
            + P   +YN ++  L  A+   +A  L+  M+ +  V P+  TF V    LC+ G+ DE
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADE 193

Query: 105 ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
           A  LL  M +    P+A  Y T++   C  G +  A  L   M  MGC  D  +++ ++ 
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253

Query: 165 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAA 224
           G C    V EA  L   M++KG  P V+TY  L  GL  + Q + A  +   +   +V  
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVV- 312

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
               +NT I G    G + EA EL+ T+G+  C+ D   Y+ L+ GLCK GR+  A+ L 
Sbjct: 313 ---LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLL 369

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
           R + ++    +VVTY I++H  C +G  D    L  +M    +  N   +  +I+   + 
Sbjct: 370 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKD 429

Query: 345 NKPSKVIELLHKMKEKKVMPD 365
            +  + + L+ +M+ +   PD
Sbjct: 430 GRMDEAMGLIQEMRSQGCNPD 450


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 198/377 (52%), Gaps = 20/377 (5%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +  TY  ++D  CK G +++A+  F +M+     P+VVTY +LIH    A   + A  LF
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV-QRDV---------------R 118
             M+ +G  P++VT++ ++D  CK G++++A ++ + M   +DV               R
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           PN  TY  L+DGFC + ++  A +L  +M   GC+ + + Y+ LI+G CK  +++EA  +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
             EM   G   T+ TY++L    F++ + + A K+  +M  +  A +   Y   IDGLCK
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
            G   EA +L + +    C+ ++  Y  +IDG    G++E  LEL   +  + +  + VT
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS-KVIELLHKM 357
           Y ++I   C +G +D AH+L  +M++     +   +  +I GF   NK   + + LL ++
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF---NKEFIESLGLLDEI 873

Query: 358 KEKKVMPDASIVSMVVD 374
            +    P  S+  +++D
Sbjct: 874 GQDDTAPFLSVYRLLID 890



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 196/418 (46%), Gaps = 57/418 (13%)

Query: 14  PNTVTYNTIIDGLCKEG------FVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           P  V YN +I  +C +        +D A+  + +M    +  + +  +S    LC A  +
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            +A  +  EM+ QG  P   T++ +++ LC   KM+ A  L + M +  +  + +TY+ +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D FC  G I +A + F  M  +GC  + V+Y  LI+ Y K K+V  A  L+  M+S+G 
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEM--------------QRDDVA--ADTSTYNT 231
            P +VTY+ L  G  +  QVE A ++FE M              Q DD +   +  TY  
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL-------- 283
            +DG CK+  + EA +L   + +  CE +   Y+ LIDGLCK G+L+ A E+        
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704

Query: 284 -------FRSLPRRVL--------------------VADVVTYNIMIHGLCNDGQMDKAH 316
                  + SL  R                        +VV Y  MI GLC  G+ D+A+
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            L   MEE    PNV+ +  +I GF  I K    +ELL +M  K V P+     +++D
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 177/344 (51%), Gaps = 4/344 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY  ++DG CK   V++A+ L   M  E   P+ + Y++LI GLC     +EA+ 
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM + G   ++ T++ ++D   K  + D AS++L  M++    PN   Y+ ++DG C
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK + A +L   ME  GC+ + V+Y  +I+G+    ++E  L L   M SKG+ P  V
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 815

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L     +   ++ A  L EEM++      T+ Y   I+G   N   +E++ L   +
Sbjct: 816 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEI 873

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP--RRVLVADVVTYNIMIHGLCNDG 310
           G       +  Y  LID L K+ RLE+AL L   +      LV    TYN +I  LC   
Sbjct: 874 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 933

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           +++ A  LF +M +  V P +  F +LI G  R +K S+ + LL
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977



 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 186/385 (48%), Gaps = 22/385 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TV Y  +I GLC+    ++A     +M+  +  P+VVTY++L+ G  +       KR+
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              MM +G  PS   FN ++   C +G    A +LL  MV+    P    Y+ L+   C 
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419

Query: 134 TGK------INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
                    ++ AE+ +  M + G   + ++ +      C   + E+A S+ REM+ +G 
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 479

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P   TY+ +   L    ++E A  LFEEM+R  + AD  TY   +D  CK G I +A +
Sbjct: 480 IPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            F  +  + C  ++  Y  LI    K+ ++  A ELF ++     + ++VTY+ +I G C
Sbjct: 540 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC 599

Query: 308 NDGQMDKAHDLF-----------LDM-----EENAVAPNVIIFVTLIHGFVRINKPSKVI 351
             GQ++KA  +F           +DM     ++N+  PNV+ +  L+ GF + ++  +  
Sbjct: 600 KAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEAR 659

Query: 352 ELLHKMKEKKVMPDASIVSMVVDLL 376
           +LL  M  +   P+  +   ++D L
Sbjct: 660 KLLDAMSMEGCEPNQIVYDALIDGL 684



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 168/320 (52%), Gaps = 5/320 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN + Y+ +IDGLCK G +D+A+ +  +M        + TY+SLI         + A 
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++  +M++    P+VV +  ++D LCK GK DEA +L+ +M ++  +PN  TY+ ++DGF
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            + GKI    EL   M S G   + V+Y +LI+  CKN  ++ A +L  EM         
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y  +  G F    +E +L L +E+ +DD A   S Y   ID L K   +  A+ L   
Sbjct: 850 AGYRKVIEG-FNKEFIE-SLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 907

Query: 252 LGILKCEL-DIQA-YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           +      L D  + YN LI+ LC + ++E A +LF  + ++ ++ ++ ++  +I GL  +
Sbjct: 908 VATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRN 967

Query: 310 GQMDKAHDLFLDMEENAVAP 329
            ++ +A  L LD   + V P
Sbjct: 968 SKISEAL-LLLDFISHMVCP 986



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 165/369 (44%), Gaps = 11/369 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TYN +I    K   +D A  +  +M   N+  D  T     + LC    W EA  
Sbjct: 232 RPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALT 291

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   +  +   P  V +  ++  LC+    +EA   L+ M      PN  TYSTL+ G C
Sbjct: 292 L---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCG-C 347

Query: 133 LTGK-INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           L  K + R + +   M   GC      +N L++ YC + +   A  L ++MV  G  P  
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 407

Query: 192 VTYNTLFLGL------FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           V YN L   +           ++ A K + EM    V  +    ++F   LC  G   +A
Sbjct: 408 VVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 467

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             + R +       D   Y+ +++ LC + ++E+A  LF  + R  LVADV TY IM+  
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            C  G +++A   F +M E    PNV+ +  LIH +++  K S   EL   M  +  +P+
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587

Query: 366 ASIVSMVVD 374
               S ++D
Sbjct: 588 IVTYSALID 596



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/329 (21%), Positives = 127/329 (38%), Gaps = 9/329 (2%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           YN+L+  +   +D    +    ++ D   +      NV++ + C+NG    A   L  + 
Sbjct: 168 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLK 227

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
               RP+  TY+ L+  F    +++ A  +   M     + D  +        CK  +  
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR 287

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           EAL+L     ++   P  V Y  L  GL E    E A+     M+      +  TY+T +
Sbjct: 288 EALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
            G      +     +   + +  C    + +N L+   C SG    A +L + + +   +
Sbjct: 345 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 404

Query: 294 ADVVTYNIMIHGLCNDGQ------MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
              V YNI+I  +C D        +D A   + +M    V  N I   +         K 
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464

Query: 348 SKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            K   ++ +M  +  +PD S  S V++ L
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYL 493


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 197/397 (49%), Gaps = 35/397 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TYNT+IDG CK G  +K+  +  +MK ++I P ++T+N+L+ GL  A    +A+ +
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306

Query: 74  FFEMMDQGVQPSVVTFNVIMD-----------------------------------ELCK 98
             EM D G  P   TF+++ D                                    LCK
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
            GK+++A  +L   + + + PN   Y+T++DG+C  G +  A     +ME  G K D ++
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN LI  +C+  E+E A     +M  KG+ P+V TYN L  G    ++ +    + +EM+
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
            +    +  +Y T I+ LCK   ++EA  + R +        ++ YN LIDG C  G++E
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A    + + ++ +  ++VTYN +I GL   G++ +A DL L++    + P+V  + +LI
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
            G+       + I L  +MK   + P      +++ L
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL 643



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 184/362 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+   Y   I    K   V K   LF +MK + I P V  YN LI GLC     N+A++
Sbjct: 176 RPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQ 235

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM+ + + PS++T+N ++D  CK G  +++ ++ + M    + P+  T++TL+ G  
Sbjct: 236 LFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLF 295

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  AE +   M+ +G   D  +++IL +GY  N++ E AL +Y   V  G+K    
Sbjct: 296 KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAY 355

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T + L   L +  ++E A ++        +  +   YNT IDG C+ G +V A      +
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D  AYNCLI   C+ G +E A +    +  + +   V TYNI+I G     + 
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           DK  D+  +ME+N   PNV+ + TLI+   + +K  +   +   M+++ V P   I +M+
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNML 535

Query: 373 VD 374
           +D
Sbjct: 536 ID 537



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 183/360 (50%), Gaps = 4/360 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V YNT+IDG C++G +  A+     M+ + + PD + YN LI   C   +   A++ 
Sbjct: 387 PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKE 446

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M  +GV PSV T+N+++    +  + D+   +L  M      PN  +Y TL++  C 
Sbjct: 447 VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 506

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+  A+ +   ME  G       YN+LI+G C   ++E+A    +EM+ KGI+  +VT
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL    ++  A  L  E+ R  +  D  TYN+ I G    G +   + L+  + 
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +  ++ Y+ LI  LC    +E+   LF  +    L  D++ YN ++H     G M+
Sbjct: 627 RSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDME 682

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA +L   M E ++  +   + +LI G +++ K  +V  L+ +M  +++ P+A   +++V
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 168/328 (51%), Gaps = 4/328 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN +I G  ++   DK   +  +M+     P+VV+Y +LI+ LC  +   EA+ +
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 516

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M D+GV P V  +N+++D  C  GK+++A R    M+++ +  N  TY+TL+DG  +
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM 576

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TGK++ AE+L   +   G K D  +YN LI+GY     V+  ++LY EM   GIKPT+ T
Sbjct: 577 TGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKT 636

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L + L     +E   +LF EM    +  D   YN  +     +G + +A  L + + 
Sbjct: 637 YH-LLISLCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMI 692

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                LD   YN LI G  K G+L     L   +  R +  +  TYNI++ G C      
Sbjct: 693 EKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYM 752

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            A+  + +M+E     +V I   L+ G 
Sbjct: 753 SAYVWYREMQEKGFLLDVCIGNELVSGL 780



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 173/364 (47%), Gaps = 4/364 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ + YN +I   C+ G ++ A+    +MK + ++P V TYN LI G     ++++   
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM D G  P+VV++  +++ LCK  K+ EA  +   M  R V P    Y+ L+DG C
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GKI  A      M   G + + V+YN LI+G     ++ EA  L  E+  KG+KP V 
Sbjct: 541 SKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVF 600

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  G      V+  + L+EEM+R  +     TY+  I    K G  +E  E  R  
Sbjct: 601 TYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG--IELTE--RLF 656

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           G +  + D+  YN ++      G +E A  L + +  + +  D  TYN +I G    G++
Sbjct: 657 GEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKL 716

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +   L  +M    + P    +  ++ G   +           +M+EK  + D  I + +
Sbjct: 717 CEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNEL 776

Query: 373 VDLL 376
           V  L
Sbjct: 777 VSGL 780



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 175/358 (48%), Gaps = 12/358 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P++ +   ++D L K         +FL +   +  P    Y   I      +D  +   L
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 201

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M    + PSV  +NV++D LCK  +M++A +L D M+ R + P+  TY+TL+DG+C 
Sbjct: 202 FNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCK 261

Query: 134 TGKINRAEELFGSMESMGCKHDD---VSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            G     E+ F   E M   H +   +++N L+ G  K   VE+A ++ +EM   G  P 
Sbjct: 262 AGN---PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPD 318

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF- 249
             T++ LF G     + E AL ++E      V  +  T +  ++ LCK G I +A E+  
Sbjct: 319 AFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILG 378

Query: 250 RTL--GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           R +  G++  E+    YN +IDG C+ G L  A     ++ ++ +  D + YN +I   C
Sbjct: 379 REMAKGLVPNEV---IYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFC 435

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             G+M+ A      M+   V+P+V  +  LI G+ R  +  K  ++L +M++   MP+
Sbjct: 436 ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPN 493



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 163/344 (47%), Gaps = 4/344 (1%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           + +A  LF  ++ E I P   +   L+  L     +     +F  +++   +PS   +  
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
            +    K   + +   L + M    + P+ F Y+ L+DG C   ++N AE+LF  M +  
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
                ++YN LI+GYCK    E++  +   M +  I+P+++T+NTL  GLF+   VE A 
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC--LID 269
            + +EM+      D  T++   DG   N     A+ ++ T   +   + + AY C  L++
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYET--AVDSGVKMNAYTCSILLN 362

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
            LCK G++E A E+      + LV + V YN MI G C  G +  A      ME+  + P
Sbjct: 363 ALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP 422

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           + + +  LI  F  + +     + ++KMK K V P     ++++
Sbjct: 423 DHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 144/294 (48%), Gaps = 31/294 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V+Y T+I+ LCK   + +A+ +   M+   ++P V  YN LI G C      +A R 
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRF 551

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+ +G++ ++VT+N ++D L   GK+ EA  LL  + ++ ++P+ FTY++L+ G+  
Sbjct: 552 SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGF 611

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILI---------------------------NG- 165
            G + R   L+  M+  G K    +Y++LI                           NG 
Sbjct: 612 AGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGV 671

Query: 166 ---YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
              Y  + ++E+A +L ++M+ K I     TYN+L LG  ++ ++     L +EM   ++
Sbjct: 672 LHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREM 731

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
             +  TYN  + G C+    + A   +R +      LD+   N L+ GL +  R
Sbjct: 732 EPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWR 785



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 111/235 (47%), Gaps = 33/235 (14%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N VTYNT+IDGL   G + +A+ L L++  + + PDV TYNSLI G   A +      L+
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622

Query: 75  FEMMDQGVQPSVVTFNVIMDELCK--------------------------------NGKM 102
            EM   G++P++ T+++++  LC                                 +G M
Sbjct: 623 EEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDM 681

Query: 103 DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
           ++A  L   M+++ +  +  TY++L+ G    GK+     L   M +   + +  +YNI+
Sbjct: 682 EKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNII 741

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           + G+C+ K+   A   YREM  KG    V   N L  GL E  + + A  +  EM
Sbjct: 742 VKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 132/307 (42%), Gaps = 35/307 (11%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +EA  LFF + ++G+ PS  +  +++D L K  +      +   +++ D RP+ F Y   
Sbjct: 126 SEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKA 185

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +        + +  ELF  M     KHD                               I
Sbjct: 186 IQAAVKLSDVGKGLELFNRM-----KHDR------------------------------I 210

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P+V  YN L  GL +  ++  A +LF+EM    +     TYNT IDG CK G   ++ +
Sbjct: 211 YPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFK 270

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +   +     E  +  +N L+ GL K+G +E A  + + +     V D  T++I+  G  
Sbjct: 271 VRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYS 330

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           ++ + + A  ++    ++ V  N      L++   +  K  K  E+L +   K ++P+  
Sbjct: 331 SNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEV 390

Query: 368 IVSMVVD 374
           I + ++D
Sbjct: 391 IYNTMID 397



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 112/236 (47%), Gaps = 3/236 (1%)

Query: 141 EELFG--SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
           +ELF   S+ S   KHD  SY +L     ++K + EA  L+  + ++GI P+  +   L 
Sbjct: 93  KELFSAFSLSSPSLKHD-FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLL 151

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
             L +  Q    + +F  +   D       Y   I    K   + + +ELF  +   +  
Sbjct: 152 DHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIY 211

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
             +  YN LIDGLCK  R+  A +LF  +  R L+  ++TYN +I G C  G  +K+  +
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
              M+ + + P++I F TL+ G  +         +L +MK+   +PDA   S++ D
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFD 327



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 110/240 (45%)

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           I+ A +LF ++ + G      S  +L++   K K+    ++++  ++    +P+   Y  
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
                 ++  V   L+LF  M+ D +      YN  IDGLCK   + +A +LF  +   +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
               +  YN LIDG CK+G  E + ++   +    +   ++T+N ++ GL   G ++ A 
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           ++  +M++    P+   F  L  G+    K    + +     +  V  +A   S++++ L
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 200/391 (51%), Gaps = 36/391 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNEAK 71
            PN VTY  ++ G C E  +++A+ +  ++ K + +  D   + ++I+G C      +A 
Sbjct: 310 SPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAA 369

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL  EM+D  +Q ++  +N++++  CK G+M EA  +L  M    VRP+ ++Y++L+DG+
Sbjct: 370 RLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGY 429

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +N+A E + +M   G     ++YN L+ G+C    +++AL L+  M+ KGI P  
Sbjct: 430 CKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNE 489

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++ +TL  G F+  + E AL L++E     +A +T+T+NT I+GLCK   + EA EL   
Sbjct: 490 ISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDK 549

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIA---------------LELFRSL--------- 287
           +   +C  DI  Y  L  G CK G ++ A               +E F SL         
Sbjct: 550 MKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQ 609

Query: 288 -----------PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
                        R L  + V Y  +I G C +G +  A++L+L+M E  + PN+ I  +
Sbjct: 610 HGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSS 669

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           L+  F R  K  +   +L  +    ++PD S
Sbjct: 670 LVSCFYRKGKFDEANLVLQNLVGTDMIPDIS 700



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 199/464 (42%), Gaps = 96/464 (20%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GV  +P+T +YN+++DG CK+G ++KA   +  M         +TYN+L+ G C     +
Sbjct: 412 GVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSID 471

Query: 69  EAKRLFFEMMDQGVQPS-----------------------------------VVTFNVIM 93
           +A RL+F M+ +G+ P+                                     TFN ++
Sbjct: 472 DALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVI 531

Query: 94  DELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG-- 151
           + LCK  +M EA  L+D M Q    P+  TY TL  G+C  G ++RA  +   +E++G  
Sbjct: 532 NGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFA 591

Query: 152 ---------------------------------CKHDDVSYNILINGYCKNKEVEEALSL 178
                                               + V+Y  LI G+CK  ++  A +L
Sbjct: 592 PTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNL 651

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST---------- 228
           Y EM+ KG+ P +   ++L    +   + + A  + + +   D+  D S           
Sbjct: 652 YLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVAN 711

Query: 229 ----------------YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
                           +N  I GLCK G I +A  L   L       D   Y+ LI G  
Sbjct: 712 FIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCS 771

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
            SG +++A +L  ++    L  ++VTYN +I+GLC  G++ +A  LF  +    ++PN I
Sbjct: 772 ASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAI 831

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            + TLI    +    ++  +L  +M E+ + P     S++++ L
Sbjct: 832 TYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGL 875



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 173/358 (48%), Gaps = 26/358 (7%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TY T+  G CK G +D+A  +  +++     P +  +NSLI G   A    +  
Sbjct: 555 CPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVN 614

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            + FEM ++G+ P+ V +  ++   CK G +  A  L   M+++ + PN F  S+L+  F
Sbjct: 615 DILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCF 674

Query: 132 CLTGKINRA----EELFGS---------------------MESMGCKHD-DVSYNILING 165
              GK + A    + L G+                       + G  H   + +NI+I G
Sbjct: 675 YRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFG 734

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
            CK   +E+A +L  ++  KG      TY++L  G      V+ A  L + M    +  +
Sbjct: 735 LCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPN 794

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
             TYN+ I GLCK+G +  AV LF+ L       +   YN LID  CK G +  A +L +
Sbjct: 795 IVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQ 854

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            +    +   V TY+I+I+GLC  G M++A  L   M EN V PN + + TLI G+VR
Sbjct: 855 RMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVR 912



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 185/392 (47%), Gaps = 42/392 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ +  + N+I++ L + G +    A+F QM+     PD  T   +    C       A 
Sbjct: 204 CRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHAL 263

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
               EM   GV+ ++V ++ +M+  C+ G+ ++A R+LD +  R   PN  TY+ L+ G+
Sbjct: 264 EFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGY 323

Query: 132 CLTGKINRA----------------EELFGSMESMGC---KHDDVS-------------- 158
           C    +  A                E +FG++ +  C   + +D +              
Sbjct: 324 CNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVN 383

Query: 159 ---YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
              YNI+INGYCK   + EA ++  EM   G++P   +YN+L  G  +   +  A + + 
Sbjct: 384 LFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYN 443

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLC 272
            M R+  AA T TYN  + G C  G I +A+ L+  +   GI   E+       L+DG  
Sbjct: 444 TMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCST---LLDGFF 500

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           KSG+ E AL L++    R L  +  T+N +I+GLC   +M +A +L   M++    P++I
Sbjct: 501 KSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDII 560

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            + TL  G+ +I    +   +L++++     P
Sbjct: 561 TYRTLFSGYCKIGDMDRASRILNELENLGFAP 592



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 179/377 (47%), Gaps = 26/377 (6%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           NT T+NT+I+GLCK   + +A+ L  +MK     PD++TY +L  G C   D + A R+ 
Sbjct: 523 NTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRIL 582

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            E+ + G  P++  FN ++       +  + + +L  M  R + PN   Y  L+ G+C  
Sbjct: 583 NELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKE 642

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV--- 191
           G ++ A  L+  M   G   +    + L++ + +  + +EA  + + +V   + P +   
Sbjct: 643 GDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAP 702

Query: 192 -----------------------VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
                                  + +N +  GL ++ ++E A  L  +++     AD  T
Sbjct: 703 RLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFT 762

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           Y++ I G   +G++  A +L  T+  +    +I  YN LI GLCKSG L  A+ LF+ L 
Sbjct: 763 YSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLW 822

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
            + +  + +TYN +I   C DG + +A  L   M E  + P V  +  LI+G        
Sbjct: 823 TKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYME 882

Query: 349 KVIELLHKMKEKKVMPD 365
           + I+LL +M E  V P+
Sbjct: 883 EAIKLLDQMIENNVDPN 899



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 172/363 (47%), Gaps = 1/363 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +  +++ ++  L   G +D A  +F +M+       + + NS+++ L    D      +F
Sbjct: 172 SAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVF 231

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M   G  P   T  ++    CK   +  A   ++ M +  V  N   Y  +M+G+C  
Sbjct: 232 EQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEV 291

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV-SKGIKPTVVT 193
           G+ N A  +  S+   G   + V+Y +L+ GYC  K +EEA  + +E+  +K +      
Sbjct: 292 GQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAV 351

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  +  G  ++ ++E A +L  EM    +  +   YN  I+G CK G +VEA  +   + 
Sbjct: 352 FGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT 411

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +    D  +YN L+DG CK G +  A E + ++ R    A  +TYN ++ G C+ G +D
Sbjct: 412 GVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSID 471

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L+  M +  +APN I   TL+ GF +  K  K + L  +   + +  + +  + V+
Sbjct: 472 DALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVI 531

Query: 374 DLL 376
           + L
Sbjct: 532 NGL 534



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 154/313 (49%), Gaps = 33/313 (10%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PNTV Y  +I G CKEG +  A  L+L+M  + + P++   +SL+        ++EA  
Sbjct: 626 SPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANL 685

Query: 73  LFFEMMDQGVQPSV--------------------------VTFNVIMDELCKNGKMDEAS 106
           +   ++   + P +                          + +N+++  LCK G++++A 
Sbjct: 686 VLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAK 745

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
            LL  +  +    + FTYS+L+ G   +G ++ A +L  +M S+G   + V+YN LI G 
Sbjct: 746 NLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGL 805

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           CK+ E+  A+SL++++ +KGI P  +TYNTL     +   +  A KL + M  + +    
Sbjct: 806 CKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTV 865

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE---- 282
            TY+  I+GLC  GY+ EA++L   +     + +   Y  LI G  +   +++ +     
Sbjct: 866 FTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPLDQ 925

Query: 283 ---LFRSLPRRVL 292
              + ++ PRR +
Sbjct: 926 STIVVKASPRRAV 938



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 50/124 (40%), Positives = 82/124 (66%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + V   PN VTYN++I GLCK G + +A +LF ++  + I+P+ +TYN+LI   C     
Sbjct: 787 LSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYI 846

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA +L   M+++G+ P+V T++++++ LC  G M+EA +LLD M++ +V PN  TY TL
Sbjct: 847 TEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTL 906

Query: 128 MDGF 131
           + G+
Sbjct: 907 IQGY 910



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 127/263 (48%), Gaps = 1/263 (0%)

Query: 113 VQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
           V ++   +A ++  L+      G+++ A ++F  M ++GC+    S N ++N   +  ++
Sbjct: 165 VYKEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDL 224

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
              ++++ +M   G  P   T   +     ++  V HAL+  EEM +  V  +   Y+  
Sbjct: 225 GATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAV 284

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR-RV 291
           ++G C+ G   +A  +  +L       +I  Y  L+ G C    +E A  + + + + + 
Sbjct: 285 MNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQ 344

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           LV D   +  +I+G C  G+M+ A  L  +M ++ +  N+ ++  +I+G+ ++ +  +  
Sbjct: 345 LVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAH 404

Query: 352 ELLHKMKEKKVMPDASIVSMVVD 374
            +LH+M    V PD    + +VD
Sbjct: 405 NILHEMTGVGVRPDTYSYNSLVD 427


>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
 gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
          Length = 649

 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 180/354 (50%), Gaps = 9/354 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VT+ T I   C+ G +D+A  L  QM      PDVV Y++LI+G       ++A 
Sbjct: 221 CPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQAL 280

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M+    +P+ V +N  +  LC   + ++   L+  MV++   PN  T+S L+   
Sbjct: 281 DLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSL 337

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    ++ A E+   ME  GC+ D V+YNI+IN   +   V++AL L   MV    KP  
Sbjct: 338 CQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDA 394

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           + +N +  G     +   A +L  +M RDD      T+N  ID LC+NG +  A ++F  
Sbjct: 395 LGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQ 454

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +C  DI  Y+ L++G  + G +E+A++LFRS+P +    D+ +YN ++ GLC   +
Sbjct: 455 MPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAAR 511

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            + A +L  +M      PN + F  LI+   +     + IE+L +M      PD
Sbjct: 512 WEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPD 565



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 180/356 (50%), Gaps = 9/356 (2%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           ++CKPNTV YN  + GLC     +    L  +M  +  +P+  T++ LI  LC  N  + 
Sbjct: 286 MLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDS 345

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +  +M   G +P  V +N+I++ L + G++D+A RLL+ MV    +P+A  ++ ++ 
Sbjct: 346 AVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLK 402

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GFC   + + A EL   M    C   ++++NILI+  C+N  V  A  ++ +M      P
Sbjct: 403 GFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTP 462

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            +VTY++L  G  E   VE A++LF  M       D  +YN  + GLC+     +A EL 
Sbjct: 463 DIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELI 519

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +    C  +   +N LI+ LC+ G ++ A+E+   +P      D+ TYN +I+G    
Sbjct: 520 AEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQ 579

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           G++D A  L   M   +  P+ I + + + G  R  +     EL+ +M   K  P+
Sbjct: 580 GRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPN 632



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 161/328 (49%), Gaps = 9/328 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T++ +I  LC+   VD A  +  QM+     PD V YN +I+ L      ++A 
Sbjct: 323 CSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDAL 382

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL   M+    +P  + FN ++   C+  +  +AS L+  M + D      T++ L+D  
Sbjct: 383 RLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDML 439

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +N A ++F  M    C  D V+Y+ L+NG+ +   VE A+ L+R M     KP +
Sbjct: 440 CQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDI 496

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +YN +  GL    + E A +L  EM   D   +  T+N  I+ LC+ G +  A+E+   
Sbjct: 497 FSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQ 556

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       DI  YN LI+G  + GRL+ AL+L  ++  +    D ++YN  + GLC   +
Sbjct: 557 MPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRAER 613

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIH 339
              A +L  +M  N   PN + F    H
Sbjct: 614 WQDAEELVAEMLRNKCTPNEVTFKYANH 641



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 150/290 (51%), Gaps = 8/290 (2%)

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
           ++ N+++ +LC   ++ +A R+LD +       +A +++TL+ G+C  G++  AE + G+
Sbjct: 91  ISCNILIKKLCATRRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLGA 149

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
             + G   + V+Y  LI+GYC++  +++AL L   + S  + P   TYNT+  GL    +
Sbjct: 150 ARATG-AANVVTYTALIDGYCRSGRLDDALRL---IASMPVAPDTYTYNTVLKGLCIAKK 205

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
            E A +L  EM R+    +  T+ T I   C+NG +  AV+L   +    C  D+  Y+ 
Sbjct: 206 WEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYST 265

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LI+G  + G ++ AL+L  ++   +   + V YN  + GLC   + +   +L  +M    
Sbjct: 266 LINGFSEQGHVDQALDLLNTM---LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKG 322

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +PN   F  LI    + N     +E+L +M++    PD    +++++ L
Sbjct: 323 CSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSL 372



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 3/117 (2%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G  C PN VT+N +I+ LC++G VD+A  +  QM      PD+ TYN+LI+G       
Sbjct: 523 VGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRL 582

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
           ++A +L   M     +P  +++N  +  LC+  +  +A  L+  M++    PN  T+
Sbjct: 583 DDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 636


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 188/354 (53%), Gaps = 4/354 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  +TY  ++ GLC+    D+A+A+  ++   N    VV +N++I G        EA 
Sbjct: 260 CMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN----VVLFNTVIGGCLAEGKLAEAT 315

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L+  M  +G QP   T++++M  LCK G++  A RLL  M ++   PN  TY+ ++  F
Sbjct: 316 ELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSF 375

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G  +    L   M + G   +   YN +I   CK+  ++EA+ L +EM S+G  P +
Sbjct: 376 CKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDI 435

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +YNT+   L    Q+E A  +FE +  + V A+  TYNT I  L ++G   +AV L + 
Sbjct: 436 CSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKE 495

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +  C LD+ +YN LI  +CK G ++ +L L   +  + +  + V+YNI+I  LC + +
Sbjct: 496 MILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERR 555

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +  A +L   M    +AP+++ + TLI+G  ++      + LL K+  + V PD
Sbjct: 556 VRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 609



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 178/338 (52%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G V + N V +NT+I G   EG + +A  L+  M  +   PD  TY+ L+HGLC     
Sbjct: 287 LGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRI 346

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A RL  EM  +G  P+VVT+ +++   CKNG  D+   LL+ M  + +  N+  Y+ +
Sbjct: 347 GSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGM 406

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +   C  G+++ A  L   M S GC  D  SYN +I   C N+++EEA  ++  ++ +G+
Sbjct: 407 IYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGV 466

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
               +TYNT+   L    + + A++L +EM     + D  +YN  I  +CK+G +  ++ 
Sbjct: 467 VANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLV 526

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +     + +  +YN LI  LCK  R+  ALEL + +  + L  D+VTYN +I+GLC
Sbjct: 527 LLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLC 586

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
             G M  A +L   +    V P++I +  LI    ++ 
Sbjct: 587 KMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVR 624



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 171/345 (49%), Gaps = 4/345 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P T T+      LC+ G  D+A AL   M      PD V Y ++IH LC      EA  
Sbjct: 156 PPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAAT 215

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+  G    V TF+ ++  +C  G++ EA+RL+D M+ +   P   TY  L+ G C
Sbjct: 216 LLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLC 275

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              + + A  + G +  +    + V +N +I G     ++ EA  LY  M  KG +P   
Sbjct: 276 RVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAH 331

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L  GL ++ ++  A++L  EM++   A +  TY   +   CKNG   +   L   +
Sbjct: 332 TYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEM 391

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 L+ Q YN +I  LCK GR++ A+ L + +  +    D+ +YN +I+ LCN+ QM
Sbjct: 392 SAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQM 451

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           ++A  +F ++ E  V  N I + T+IH  +R  +    + L  +M
Sbjct: 452 EEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM 496



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 138/284 (48%), Gaps = 4/284 (1%)

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
           V P+  TF V    LC+ G+ DEA  LL  M +    P+A  Y T++   C  G +  A 
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
            L   M  MGC  D  +++ ++ G C    V EA  L   M++KG  P V+TY  L  GL
Sbjct: 215 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
             + Q + A  +   +   +V      +NT I G    G + EA EL+ T+G+  C+ D 
Sbjct: 275 CRVRQADEARAMLGRVPELNVV----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 330

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
             Y+ L+ GLCK GR+  A+ L R + ++    +VVTY I++H  C +G  D    L  +
Sbjct: 331 HTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEE 390

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           M    +  N   +  +I+   +  +  + + L+ +M+ +   PD
Sbjct: 391 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPD 434



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 1/152 (0%)

Query: 213 LFEEM-QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           L+  M  RD V   T T+      LC+ G   EA+ L R +    C  D   Y  +I  L
Sbjct: 145 LYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHAL 204

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           C  G +  A  L   +      ADV T++ ++ G+C  G++ +A  L   M      P V
Sbjct: 205 CDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGV 264

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           + +  L+ G  R+ +  +   +L ++ E  V+
Sbjct: 265 MTYGFLLQGLCRVRQADEARAMLGRVPELNVV 296


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 180/349 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +YN +I GL + G    A  +F +M    + P+ +TYN++I G     D     RL
Sbjct: 193 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRL 252

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+  G +P+VVT+NV++  LC+ G+MDE   L+D M    + P+ FTYS L DG   
Sbjct: 253 RDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTR 312

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG       LFG     G      + +IL+NG CK+ +V +A  +   +V  G+ PT   
Sbjct: 313 TGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAI 372

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G  ++  ++ A  +FE+M+   +  D  TYN  I+GLCK   I EA +L   + 
Sbjct: 373 YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEME 432

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +  ++ +N LID   ++G+LE    +   +  + + ++V+++  ++   C +G++ 
Sbjct: 433 KSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIP 492

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           +A  +  DM    V PN  ++ ++I  ++      +   L+ KMK   V
Sbjct: 493 EAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGV 541



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 188/386 (48%), Gaps = 35/386 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +TYNT+IDG  K G ++    L  QM  +   P+VVTYN L+ GLC A   +E + L
Sbjct: 228 PNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRAL 287

Query: 74  FFEMMDQGVQPSVVTFNVIMD-----------------------------------ELCK 98
             EM    + P   T++++ D                                    LCK
Sbjct: 288 MDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCK 347

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           +GK+ +A ++L+++V   + P    Y+TL++G+C    +  A  +F  M+S   + D ++
Sbjct: 348 DGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHIT 407

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN LING CK + + EA  L  EM   G+ P+V T+NTL        Q+E    +  +MQ
Sbjct: 408 YNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQ 467

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              + ++  ++ + +   CKNG I EAV +   +       + Q YN +ID   +SG  E
Sbjct: 468 DKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTE 527

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A  L   +    + A + TYN+++ GLC + Q+D+A +L  ++    + P+V+ + T+I
Sbjct: 528 QAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTII 587

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMP 364
                     + +ELL +M +  + P
Sbjct: 588 SACCNKGDTDRALELLQEMHKYDIRP 613



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 190/391 (48%), Gaps = 35/391 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTYN ++ GLC+ G +D+ +AL  +M   ++ PD  TY+ L  GL    D      
Sbjct: 262 KPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLS 321

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF E + +GV     T +++++ LCK+GK+ +A ++L+++V   + P    Y+TL++G+C
Sbjct: 322 LFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYC 381

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +  A  +F  M+S   + D ++YN LING CK + + EA  L  EM   G+ P+V 
Sbjct: 382 QVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVE 441

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL        Q+E    +  +MQ   + ++  ++ + +   CKNG I EAV +   +
Sbjct: 442 TFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDM 501

Query: 253 GILKCELDIQAYNCLID-----------------------------------GLCKSGRL 277
                  + Q YN +ID                                   GLCK+ ++
Sbjct: 502 IHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQI 561

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A EL  +L  + L  DVV+YN +I   CN G  D+A +L  +M +  + P +  +  L
Sbjct: 562 DEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPL 621

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           +       +   +  L   M  K V P +SI
Sbjct: 622 LSALGSAGRVHDMECLYQHMVHKNVEPSSSI 652



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 186/369 (50%), Gaps = 2/369 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINP-DVVTYNSLIHGLCHAN 65
           +    +P+T  +N  +      G +D+A A+  +M + E   P D  +YN +I GL  + 
Sbjct: 150 VAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSG 209

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             ++A ++F EM+D+GV P+ +T+N ++D   K G ++   RL D M+Q   +PN  TY+
Sbjct: 210 KGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYN 269

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+ G C  G+++    L   M S     D  +Y+IL +G  +  +    LSL+ E + K
Sbjct: 270 VLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKK 329

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G+     T + L  GL +  +V  A ++ E +    +   T+ YNT I+G C+   +  A
Sbjct: 330 GVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGA 389

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             +F  +       D   YN LI+GLCK   +  A +L   + +  +   V T+N +I  
Sbjct: 390 FSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDA 449

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
               GQ++K   +  DM++  +  NVI F +++  F +  K  + + +L  M  K V+P+
Sbjct: 450 YGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPN 509

Query: 366 ASIVSMVVD 374
           A + + ++D
Sbjct: 510 AQVYNSIID 518



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 176/348 (50%), Gaps = 6/348 (1%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T + +++GLCK+G V KA+ +   +    + P    YN+LI+G C   D   A  +F +M
Sbjct: 337 TCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQM 396

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
             + ++P  +T+N +++ LCK   + EA  L+  M +  V P+  T++TL+D +   G++
Sbjct: 397 KSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQL 456

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
            +   +   M+  G K + +S+  ++  +CKN ++ EA+++  +M+ K + P    YN++
Sbjct: 457 EKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSI 516

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
                E    E A  L E+M+   V+A   TYN  + GLCKN  I EA EL   L     
Sbjct: 517 IDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGL 576

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D+ +YN +I   C  G  + ALEL + + +  +   + TY+ ++  L + G++     
Sbjct: 577 RPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMEC 636

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           L+  M    V P+  I+ T      R    SKV  L  +M EK +  D
Sbjct: 637 LYQHMVHKNVEPSSSIYGT------RCENESKVASLKKEMSEKGIAFD 678



 Score =  140 bits (353), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 129/288 (44%), Gaps = 70/288 (24%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P T  YNT+I+G C+   +  A ++F QMK  +I PD +TYN+LI+GLC      EA+ L
Sbjct: 368 PTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDL 427

Query: 74  FFEMMDQGVQPSVVTFNVIMDE-----------------------------------LCK 98
             EM   GV PSV TFN ++D                                     CK
Sbjct: 428 VMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCK 487

Query: 99  NGKMDEASRLLDLMVQRDVRPNA-----------------------------------FT 123
           NGK+ EA  +LD M+ +DV PNA                                   FT
Sbjct: 488 NGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFT 547

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           Y+ L+ G C   +I+ AEEL  ++ + G + D VSYN +I+  C   + + AL L +EM 
Sbjct: 548 YNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMH 607

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
              I+PT+ TY+ L   L    +V     L++ M   +V   +S Y T
Sbjct: 608 KYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGT 655



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 139/284 (48%), Gaps = 2/284 (0%)

Query: 84  PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEEL 143
           PS+ + N++++ L   G+  +      L+V    RP+ F ++  +      G ++ A  +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 144 FGSM-ESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
              M  S G    D  SYN++I G  ++ +  +AL ++ EMV +G+ P  +TYNT+  G 
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
            +   +E   +L ++M +D    +  TYN  + GLC+ G + E   L   +       D 
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG 300

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
             Y+ L DGL ++G     L LF    ++ ++    T +I+++GLC DG++ KA  +   
Sbjct: 301 FTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEM 360

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +    + P   I+ TLI+G+ ++        +  +MK + + PD
Sbjct: 361 LVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPD 404



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 95/184 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N +++ +++   CK G + +A A+   M  +++ P+   YNS+I     +    +A  
Sbjct: 472 KSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFL 531

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M   GV  S+ T+N+++  LCKN ++DEA  L+  +  + +RP+  +Y+T++   C
Sbjct: 532 LVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACC 591

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  +RA EL   M     +    +Y+ L++       V +   LY+ MV K ++P+  
Sbjct: 592 NKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSS 651

Query: 193 TYNT 196
            Y T
Sbjct: 652 IYGT 655


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 190/400 (47%), Gaps = 41/400 (10%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN +TYN ++ GLC+ G + +  AL  +M  + + PD  TY+ L  GL    D      
Sbjct: 267 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 326

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF + +  GV     T +++++ LCK+GK+  A  +L  +V   + P    Y+TL++G+C
Sbjct: 327 LFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYC 386

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            TG++  A   FG M+S   K D ++YN LING CK + +  A  L  EM   G+ PTV 
Sbjct: 387 QTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVE 446

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV------ 246
           T+NTL        Q+E    +  EMQ + +  +  +Y + ++  CKNG I EAV      
Sbjct: 447 TFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM 506

Query: 247 --------------------------------ELFRTLGILKCELDIQAYNCLIDGLCKS 274
                                           E  ++ GI      I  YN LI GLC  
Sbjct: 507 FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGI---SPSIVTYNLLIKGLCNQ 563

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            ++  A E+  SL    L+ D V+YN +I   C  G +DKA DL   M +  +   V  +
Sbjct: 564 SQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 623

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             LI G     + +++  L  KM +  V+P  +I +++V+
Sbjct: 624 HQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVE 663



 Score =  197 bits (500), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 182/357 (50%), Gaps = 2/357 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  +YN +I G+ + G    A  +F +M    + P+ +TYN++I G     D     RL
Sbjct: 198 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 257

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+  G++P+ +T+NV++  LC+ G+M E S LLD M  + + P+ FTYS L DG   
Sbjct: 258 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 317

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G       LFG     G    D + +IL+NG CK+ +V  A  + + +V+ G+ PT V 
Sbjct: 318 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 377

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G  +  ++E A   F +M+   +  D  TYN  I+GLCK   I  A +L   + 
Sbjct: 378 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 437

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  ++ +N LID   ++G+LE    +   +    L  +VV+Y  +++  C +G++ 
Sbjct: 438 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 497

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +A  +  DM    V PN  ++  +I  +V      +   L+ KMK   + P  SIV+
Sbjct: 498 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP--SIVT 552



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 177/344 (51%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T + +++GLCK+G V  A+ +   +    + P  V YN+LI+G C   +   A   F +M
Sbjct: 342 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 401

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
             + ++P  +T+N +++ LCK  ++  A  LL  M    V P   T++TL+D +  TG++
Sbjct: 402 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 461

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
            +   +   M+  G K + VSY  ++N +CKN ++ EA+++  +M  K + P    YN +
Sbjct: 462 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 521

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
                E    + A  L E+M+ + ++    TYN  I GLC    I EA E+  +L   + 
Sbjct: 522 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRL 581

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D  +YN LI   C  G ++ AL+L + + +  + + V TY+ +I GL   G++++   
Sbjct: 582 IPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEY 641

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           L+  M +N V P+  I   ++  + +     K  +L  +M +K+
Sbjct: 642 LYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 685



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 140/273 (51%), Gaps = 1/273 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ +TYN +I+GLCK   +  A+ L ++M+   +NP V T+N+LI          +   
Sbjct: 407 KPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFI 466

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM + G++P+VV++  I++  CKNGK+ EA  +LD M  +DV PNA  Y+ ++D + 
Sbjct: 467 VLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYV 526

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  ++A  L   M+S G     V+YN+LI G C   ++ EA  +   + +  + P  V
Sbjct: 527 EHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAV 586

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNTL         ++ AL L + M +  + +   TY+  I GL   G + E   L++ +
Sbjct: 587 SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKM 646

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
                      +N +++   K G  EI  E  R
Sbjct: 647 MQNNVVPSNAIHNIMVEAYSKYGN-EIKAEDLR 678



 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 156/345 (45%), Gaps = 42/345 (12%)

Query: 70  AKRLFFEMMDQGVQP--SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR--------- 118
           A RL  ++ D+   P  S+ + N++++ L   G+  +  R   ++     R         
Sbjct: 111 ALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKA 170

Query: 119 ---------------------------PNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
                                      PNAF+Y+ ++ G    G+   A E+F  M    
Sbjct: 171 VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA 230

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
              + ++YN +I+G+ K  ++E    L  +MV  G+KP  +TYN L  GL    ++    
Sbjct: 231 VLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETS 290

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC--LID 269
            L +EM    +  D  TY+   DGL +NG     + LF     LK  + I  Y C  L++
Sbjct: 291 ALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKY--LKNGVTIGDYTCSILLN 348

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           GLCK G++ IA E+ +SL    LV   V YN +I+G C  G+++ A   F  M+   + P
Sbjct: 349 GLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKP 408

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + I +  LI+G  +  + +   +LL +M++  V P     + ++D
Sbjct: 409 DHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLID 453



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 86/172 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   YN IID   + G  D+A  L  +MK   I+P +VTYN LI GLC+ +  +EA+ +
Sbjct: 513 PNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEI 572

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              + +  + P  V++N ++   C  G +D+A  L   M +  ++    TY  L+ G   
Sbjct: 573 INSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGG 632

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            G++N  E L+  M        +  +NI++  Y K     +A  L +EM+ K
Sbjct: 633 AGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 684



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 76/145 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ VTYN +I GLC +  + +A+ +   +    + PD V+YN+LI   C+  + ++A  
Sbjct: 547 SPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 606

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M   G++ +V T++ ++  L   G+++E   L   M+Q +V P+   ++ +++ + 
Sbjct: 607 LQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYS 666

Query: 133 LTGKINRAEELFGSMESMGCKHDDV 157
             G   +AE+L   M      HDD 
Sbjct: 667 KYGNEIKAEDLRKEMLQKRNNHDDT 691


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 187/374 (50%), Gaps = 13/374 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T+  +++GLCK G  D A  +F +M  + I P+ + Y  ++ GLC A   ++  RL
Sbjct: 199 PNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRL 258

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   G  P  +T N ++D  CK G++DEA  LL L  +         YS+L+DG   
Sbjct: 259 LNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFR 318

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             + +  +E    M   G + D V Y ILI G+C+   V+ AL++  +M  +G+ P    
Sbjct: 319 AKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYC 378

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  ++  ++ A  L  E+ ++D    + TY   I G+C+NG + EA ++F  + 
Sbjct: 379 YNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQME 438

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL-----PRRVL--------VADVVTYN 300
            L C   I  +N LIDGLCK+G LE A  LF  +     P   L        V D  +  
Sbjct: 439 NLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQ 498

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            M+  LC  G + KA+ L + + ++ V P+++ +  LI+GF +    +   +L  +++ K
Sbjct: 499 TMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLK 558

Query: 361 KVMPDASIVSMVVD 374
              PD+     ++D
Sbjct: 559 GHSPDSVTYGTLID 572



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 181/358 (50%), Gaps = 13/358 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+++T N ++DG CK G +D+A AL    + E     +  Y+SLI GL  A  ++E +
Sbjct: 267 CCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQ 326

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
               +M   G++P VV + +++   C+ G +D A  +L+ M QR + P+ + Y+ L+ GF
Sbjct: 327 EWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGF 386

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +++A  L   +    C     +Y ILI G C+N  ++EA  ++ +M + G  P++
Sbjct: 387 CDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSI 446

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEM-------------QRDDVAADTSTYNTFIDGLCK 238
           +T+N L  GL +  ++E A  LF +M             Q  D   DT++  T ++ LC+
Sbjct: 447 MTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCE 506

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           +G I++A +L   L       DI  YN LI+G CK+  +  A +LFR L  +    D VT
Sbjct: 507 SGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVT 566

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           Y  +I G     + + A  +   M +N   P+  ++  L+    R  K S    L  K
Sbjct: 567 YGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLK 624



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 188/391 (48%), Gaps = 47/391 (12%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T  YN +I G C  G +DKA++L L++   +  P   TY  LI G+C     +EA+++
Sbjct: 374 PDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQI 433

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL-------------LDLMVQRDVRPN 120
           F +M + G  PS++TFN ++D LCK G+++EA  L             L L    D   +
Sbjct: 434 FNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMD 493

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             +  T+++  C +G I +A +L   +   G   D ++YN+LING+CK K +  A  L+R
Sbjct: 494 TASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFR 553

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           E+  KG  P  VTY TL  G   + + E A ++ ++M ++     ++ Y   +   C+ G
Sbjct: 554 ELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKG 613

Query: 241 YIVEAVELF----RTLG---------------------ILKCELD---------IQAYNC 266
            +  A  L+    R+L                       ++C L+         I  Y  
Sbjct: 614 KLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTI 673

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
            + GLC++ R E AL++F  L    +  +  +  ++I+GLC DG ++ A D+FL   E  
Sbjct: 674 WLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKG 733

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
                 I   L+   +  +K    ++LL++M
Sbjct: 734 FMLMPRICNQLLRSLILQDKMKHALDLLNRM 764



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 166/358 (46%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VT+N +ID L K+   D    +  ++K  NI     T++ LI     +    +A   F +
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M D G +P V T+N I+  + +      A  + + M++ +  PN  T+  L++G C  GK
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
            + A ++F  M   G   + + Y I+++G C+ K  ++   L   M   G  P  +T N 
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G  ++ Q++ A  L +  +++        Y++ IDGL +     E  E  R +    
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            E D+  Y  LI G C+ G ++ AL +   + +R L  D   YN +I G C+ G +DKA 
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            L L++ +N   P    +  LI G  R     +  ++ ++M+     P     + ++D
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALID 454



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 161/323 (49%), Gaps = 53/323 (16%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P + TY  +I G+C+ G +D+A+ +F QM+    +P ++T+N+LI GLC A +  EA+
Sbjct: 407 CFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEAR 466

Query: 72  RLFFEMMDQGVQPSV--------------VTFNVIMDELCKNGKMDEASRLLDLMVQRDV 117
            LF++M + G  PS+               +   +++ LC++G + +A +LL  +    V
Sbjct: 467 HLFYKM-EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGV 525

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
            P+  TY+ L++GFC    IN A +LF  ++  G   D V+Y  LI+G+ +    E+A  
Sbjct: 526 VPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFR 585

Query: 178 LYREMVSKGIKPTVVTYNTLF------------------------------LGLFEIH-- 205
           +  +MV  G  P+   Y  L                               L L E H  
Sbjct: 586 VLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFE 645

Query: 206 --QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQA 263
             ++E A++   EM       + + Y  ++ GLC+     EA+++F  L   +C++D+  
Sbjct: 646 KGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLK--ECQMDVNP 703

Query: 264 YNC--LIDGLCKSGRLEIALELF 284
            +C  LI+GLCK G LE+A+++F
Sbjct: 704 PSCVMLINGLCKDGNLEMAVDIF 726



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 144/300 (48%), Gaps = 9/300 (3%)

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           W   +R F          S VT N+++D L K+   D   ++L+ +   +++    T+S 
Sbjct: 86  WTTRRRSF---------RSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSV 136

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+  +  +G   +A E FG M+  GCK D  +YN +++   + +    AL++Y +M+   
Sbjct: 137 LIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLN 196

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
             P   T+  L  GL +  + + ALK+F+EM +  +  +T  Y   + GLC+     +  
Sbjct: 197 YNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVH 256

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            L  T+ +  C  D    N L+DG CK G+++ A  L +   +   V  +  Y+ +I GL
Sbjct: 257 RLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGL 316

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
               + D+  +    M +  + P+V+++  LI GF  +      + +L+ M ++ + PD 
Sbjct: 317 FRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDT 376


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 127/388 (32%), Positives = 201/388 (51%), Gaps = 38/388 (9%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHA 64
           GE G++   N VT   +I G C++  +++A+ +  +M + E +  D   Y  LI G C  
Sbjct: 280 GERGIL--RNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRV 337

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
              ++A RL  EM++ G++ ++   N +++  CKNG++ EA RLL  MV  D+ P +++Y
Sbjct: 338 CKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSY 397

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           STLMDGFC  G + +A  ++  M  +G + + V++N L+ G C+    E+AL ++  M+ 
Sbjct: 398 STLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLK 457

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           +G+ P  V+Y TL   LF++ +   AL L+ ++        T  +NT I+G CK   ++E
Sbjct: 458 RGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIE 517

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA---------------LELFRSL-- 287
           A E F  +  L  E D   Y  LIDG CK G +E A               +EL+ SL  
Sbjct: 518 AEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIG 577

Query: 288 -------PRRV-----------LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
                   R V           L  +VVTY  +I G C++G++DKA   + DM E   AP
Sbjct: 578 GLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAP 637

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKM 357
           NVII   ++    R+ +  +   LL KM
Sbjct: 638 NVIICSKIVSSLYRLGRIDEANMLLQKM 665



 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 122/393 (31%), Positives = 192/393 (48%), Gaps = 37/393 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTY T+IDG CK G V++A  +  +M+ E I P +  YNSLI GL  +    E   
Sbjct: 531 EPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMD 590

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  +G+ P+VVT+  ++   C  G++D+A      M+++   PN    S ++    
Sbjct: 591 LLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLY 650

Query: 133 LTGKINRAEELFGSMESMGC-----------KHDD------------------------V 157
             G+I+ A  L   M ++             K DD                        V
Sbjct: 651 RLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSV 710

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            YNI I G CK+ +V++A  ++  ++ +G  P   TY TL  G      V  A  L +EM
Sbjct: 711 VYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEM 770

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
            +  +A +  TYN  I+GLCK+G +  A +LF  L +     ++ +YN LIDG CK+G  
Sbjct: 771 LKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNT 830

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             AL+L   + +  +   ++TY+ +I+G C  G M KA +L  +M E     N+  FV L
Sbjct: 831 REALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKL 890

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           + G V+  +  K+ + LH M    + P A ++S
Sbjct: 891 VEGHVKCGEVKKIAK-LHNMMHITI-PCAGVIS 921



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 207/466 (44%), Gaps = 105/466 (22%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P + +Y+T++DG C+EG V KA +++ +M    I  +VVT+NSL+ GLC    + +A  
Sbjct: 391 EPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALH 450

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++  M+ +GV P  V++  ++D L K G+   A  L + ++ R    + + ++T+++GFC
Sbjct: 451 VWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFC 510

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA----------------- 175
              K+  AEE F  M+ +G + D V+Y  LI+GYCK   VEEA                 
Sbjct: 511 KMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIE 570

Query: 176 ------------------LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
                             + L  EM  KG+ P VVTY TL  G  +  +++ A   + +M
Sbjct: 571 LYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDM 630

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD----------------- 260
                A +    +  +  L + G I EA  L + +  L   LD                 
Sbjct: 631 IEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDS 690

Query: 261 ------------------IQAYNCLIDGLCKSGRLEIALELFRSL------P-------- 288
                                YN  I GLCKSG+++ A ++F SL      P        
Sbjct: 691 QKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTL 750

Query: 289 ---------------------RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
                                +R L  +++TYN +I+GLC  G +D+A  LF  +    +
Sbjct: 751 IHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGL 810

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           APNVI +  LI G+ +     + ++L +KM ++ + P     S ++
Sbjct: 811 APNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALI 856



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 191/370 (51%), Gaps = 3/370 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G++G  C P+  + N ++  L ++G    A  ++  +    I PDV T + +++  C   
Sbjct: 175 GKLG--CVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDG 232

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             N A     EM   G + +VVT+N ++D     G M+ A  +L LM +R +  N  T +
Sbjct: 233 WVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLT 292

Query: 126 TLMDGFCLTGKINRAEELFGSME-SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
            L+ G+C   K+  AE++   ME S G   D+ +Y +LI+GYC+  ++++A+ L  EM++
Sbjct: 293 LLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLN 352

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
            G++  +   N L  G  +  QV  A +L   M   D+  ++ +Y+T +DG C+ G + +
Sbjct: 353 VGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTK 412

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A+ ++  +  +  + ++  +N L+ GLC+ G  E AL ++  + +R +  D V+Y  ++ 
Sbjct: 413 AISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLD 472

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            L   G+  +A  L+ D+       +   F T+I+GF ++ K  +  E  ++MKE    P
Sbjct: 473 LLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEP 532

Query: 365 DASIVSMVVD 374
           D      ++D
Sbjct: 533 DGVTYRTLID 542



 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 151/324 (46%), Gaps = 35/324 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY T+I G C EG +DKA   +  M  +   P+V+  + ++  L      +EA  L
Sbjct: 602 PNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANML 661

Query: 74  FFEM------MDQGV-----------------------------QPSVVTFNVIMDELCK 98
             +M      +D G                               P+ V +N+ +  LCK
Sbjct: 662 LQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCK 721

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           +GK+D+A ++   ++ R   P+ FTY TL+ G+   G +N A  L   M   G   + ++
Sbjct: 722 SGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIIT 781

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN LING CK+  ++ A  L+ ++  KG+ P V++YN L  G  +      AL L  +M 
Sbjct: 782 YNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKML 841

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
           ++ ++    TY+  I G CK G + +A  L   +  L  + +I  +  L++G  K G ++
Sbjct: 842 KEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVK 901

Query: 279 IALELFRSLPRRVLVADVVTYNIM 302
              +L   +   +  A V+++  M
Sbjct: 902 KIAKLHNMMHITIPCAGVISHKQM 925



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 170/392 (43%), Gaps = 55/392 (14%)

Query: 40  LQMKGENINPDVVTYNSLIHGLCHAN------------------------DWNEAKRLF- 74
           L  K  N  P+V ++  L+H L  A                          WNE  R+F 
Sbjct: 83  LASKQSNFRPNVNSHCKLVHILSRARMYDETRSYLNELVTPSKNNYSSLVVWNELVRVFE 142

Query: 75  --------FEMMDQ---------------------GVQPSVVTFNVIMDELCKNGKMDEA 105
                   F+M+ +                     G  PS+ + N ++  L + G+   A
Sbjct: 143 DFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNA 202

Query: 106 SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILING 165
             + D + +  + P+ FT S +++ +C  G +N A +    M+ +G + + V+YN LI+G
Sbjct: 203 ILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDG 262

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD-VAA 224
                ++E A  + + M  +GI    VT   L  G     ++E A K+  EM+R + +  
Sbjct: 263 CVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVL 322

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           D   Y   IDG C+   + +AV L   +  +   +++   N LI+G CK+G++  A  L 
Sbjct: 323 DEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLL 382

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
             +    L  +  +Y+ ++ G C +G + KA  ++ +M    +  NV+   +L+ G  R+
Sbjct: 383 MRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRV 442

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                 + + H M ++ V PD      ++DLL
Sbjct: 443 GAFEDALHVWHLMLKRGVTPDEVSYCTLLDLL 474



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 124/276 (44%), Gaps = 20/276 (7%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYST-LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           +D  SRLL L     ++   F +S  ++D   L  K N    L      +  K  +   N
Sbjct: 36  IDRISRLLVLGRYHALKDLNFQFSDYILDSVLLKLKFNPIASL--HFFKLASKQSNFRPN 93

Query: 161 ILINGYCKNKEVEEALSLY---REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +  N +CK   +     +Y   R  +++ + P+   Y++L +           +++FE  
Sbjct: 94  V--NSHCKLVHILSRARMYDETRSYLNELVTPSKNNYSSLVVW-------NELVRVFE-- 142

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
              D     + ++  +   C+ G I  A+ +F  +G L C   +++ N L+  L + G  
Sbjct: 143 ---DFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGES 199

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A+ ++  + R  +V DV T +IM++  C DG ++ A D   +M+      NV+ + +L
Sbjct: 200 SNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSL 259

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           I G V I    +   +L  M E+ ++ +   +++++
Sbjct: 260 IDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLI 295


>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
 gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
          Length = 718

 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 108/293 (36%), Positives = 171/293 (58%), Gaps = 3/293 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKAL--FLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           KPN VTYN +ID  C +G V+  + L  F +M    + PD +T+NSL+        W  A
Sbjct: 144 KPNLVTYNAVIDA-CGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAA 202

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           + L  EM+++G+   + T+N ++D +CK G++D A  ++  M  +++ PN  TYST++DG
Sbjct: 203 RSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDG 262

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G+++ A  LF  M+ +G   D VSYN L++ Y K    EEA+ + REM + GI+  
Sbjct: 263 YAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKD 322

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTYN L  G  + ++ +   K+FEEM+   V+ +  TY+T ID   K G   EA+++FR
Sbjct: 323 VVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFR 382

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
                  + D+  Y+ LID LCK+G +E A+ L   + +  +  +VVTYN +I
Sbjct: 383 EFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 435



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 178/356 (50%), Gaps = 1/356 (0%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           + +I  L + G V+ AK +F     E     V  ++++I     +   NEA ++F+ M D
Sbjct: 81  SAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKD 140

Query: 80  QGVQPSVVTFNVIMDELCKNG-KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            G++P++VT+N ++D   K G +      + D M++  ++P+  T+++L+      G   
Sbjct: 141 YGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWE 200

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A  L   M + G   D  +YN L++  CK  +++ A  +  EM +K I P VVTY+T+ 
Sbjct: 201 AARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMI 260

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            G  +  +++ A  LF EM+   ++ D  +YNT +    K G   EA+++ R +      
Sbjct: 261 DGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIR 320

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            D+  YN L+ G  K  + ++  ++F  +  R +  +++TY+ +I      G   +A D+
Sbjct: 321 KDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDV 380

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           F + ++  +  +V+++  LI    +       + LL +M ++ + P+    + ++D
Sbjct: 381 FREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 436



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 157/309 (50%), Gaps = 3/309 (0%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           AK +F   + +G   +V  F+ I+    ++G  +EA ++   M    ++PN  TY+ ++D
Sbjct: 96  AKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVID 155

Query: 130 GFCLTGKI--NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
             C  G +   R  E+F  M   G + D +++N L+    K    E A SL  EMV++GI
Sbjct: 156 A-CGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGI 214

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
              + TYNTL   + +  Q++ A ++  EM   ++  +  TY+T IDG  K G + +A  
Sbjct: 215 DQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARN 274

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           LF  +  L   LD  +YN L+    K GR E A+++ R +    +  DVVTYN ++ G  
Sbjct: 275 LFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYG 334

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
              + D    +F +M+   V+PN++ + TLI  + +     + +++  + K+  +  D  
Sbjct: 335 KQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVV 394

Query: 368 IVSMVVDLL 376
           + S ++D L
Sbjct: 395 LYSALIDAL 403



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 132/291 (45%), Gaps = 29/291 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + + VTYN ++ G  K+   D  + +F +MK  +++P+++TY++LI        + EA  
Sbjct: 320 RKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMD 379

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF- 131
           +F E    G++  VV ++ ++D LCKNG ++ A  LLD M +  +RPN  TY++++D F 
Sbjct: 380 VFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 439

Query: 132 ------CLTGKINRAEEL-FGSMESMGCKH------DDVSYNILIN----------GYCK 168
                  +     +  EL   S+ S   +        D   N +I           G  K
Sbjct: 440 RPATTESVVDDAGQTSELQIDSLSSSAVEKATKSLVADREDNRIIKIFGQLAAEKAGQAK 499

Query: 169 NKEVEEA---LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
           N   +E    L ++ +M    IKP VVT++ +       +  E A  L EE++  D    
Sbjct: 500 NSGGQEMMCILGVFHKMHELEIKPNVVTFSAILNACSRCNSFEEASMLLEELRLFDNQVY 559

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
              +   + G  +N +  +A  LF  + ++        YN L D L   G+
Sbjct: 560 GVAHGLLM-GYRENVW-EQAQSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 608


>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
 gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
          Length = 484

 Score =  200 bits (508), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 190/350 (54%), Gaps = 4/350 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   YN ++ G C  G V +A   F +M G+   P+V TYN++I+GLC     + A  L
Sbjct: 112 PDVTAYNVVLKGYCDLGRVGRALIKFGKM-GKTCKPNVATYNTVINGLCKFGKIDWAVHL 170

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  +    V P   T++ ++  LC+  +++ A ++ D+M++ +   +A  Y+ + DGFC 
Sbjct: 171 FTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCK 230

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK-EVEEALSLYREMVSKGIKPTVV 192
             +++ A E+  +M   GCK   V+YN +ING C+ K  +EEA  L+++MV     P  V
Sbjct: 231 ERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAV 290

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY T+ LGL +I++V+  L+LF+ M +  ++ D   Y++ I    K   + EA  + +  
Sbjct: 291 TYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDA 350

Query: 253 GILKCELDIQAYNCLIDGLCKS--GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
                  D+  Y  LI G C++   R++ AL LF+++  R +  +V+TYNI++ GLC  G
Sbjct: 351 ARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTG 410

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           + D+A+ +F +M +   +PN + F  +  G +   K  K   +   M  K
Sbjct: 411 RFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCGKTDKFERIFMDMVYK 460



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 175/320 (54%), Gaps = 3/320 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G++G  CKPN  TYNT+I+GLCK G +D A  LF ++  + ++PD  TY++L+HGLC A 
Sbjct: 138 GKMGKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAE 197

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
               A +++  M++         +N + D  CK  ++DEA  +L  M+QR  +P+  TY+
Sbjct: 198 RLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYN 257

Query: 126 TLMDGFC-LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
            +++G C    +I  A  LF  M    C  + V+Y  +I G  K  EV+  L L++ M  
Sbjct: 258 CIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSK 317

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC--KNGYI 242
            G+ P    Y++L     ++ +++ A  + ++  R+ V  D   Y T I G C  +   +
Sbjct: 318 AGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRV 377

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            EA+ LF+ +   +   ++  YN ++ GLCK+GR + A ++F+ + +     + +T+ +M
Sbjct: 378 DEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVM 437

Query: 303 IHGLCNDGQMDKAHDLFLDM 322
             G+ + G+ DK   +F+DM
Sbjct: 438 TMGMIHCGKTDKFERIFMDM 457



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 168/342 (49%), Gaps = 3/342 (0%)

Query: 35  AKALF-LQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIM 93
           A+  F    K E    DV  Y  L+H L  A    EA R F   +    +PS+ +F +I+
Sbjct: 27  ARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIII 86

Query: 94  DELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCK 153
              C       A R L  M    + P+   Y+ ++ G+C  G++ RA   FG M    CK
Sbjct: 87  QCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT-CK 145

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            +  +YN +ING CK  +++ A+ L+  +    + P   TY+TL  GL +  ++E A+K+
Sbjct: 146 PNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKV 205

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
           ++ M   +   D   YN   DG CK   + EA+E+ +T+    C+  +  YNC+I+G+C+
Sbjct: 206 YDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQ 265

Query: 274 -SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
              R+E A  LF+ +       + VTY  MI GL    ++ +  +LF  M +  ++P+  
Sbjct: 266 YKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGY 325

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            + +LI+ FV++ K  +   +L       V PD  + + ++ 
Sbjct: 326 AYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLIS 367



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 2/181 (1%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G  C PN VTY T+I GL K   V +   LF  M    ++PD   Y+SLI+        
Sbjct: 281 VGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKL 340

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK--MDEASRLLDLMVQRDVRPNAFTYS 125
           +EAK +  +     V P V  +  ++   C+  K  +DEA  L   M  R V PN  TY+
Sbjct: 341 DEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYN 400

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            ++ G C TG+ + A ++F  M  + C  + +++ ++  G     + ++   ++ +MV K
Sbjct: 401 IVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCGKTDKFERIFMDMVYK 460

Query: 186 G 186
           G
Sbjct: 461 G 461


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/359 (32%), Positives = 185/359 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y T+IDG CK G +++ K LF +M   ++  +  TY  LI+G        +   L
Sbjct: 197 PNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIEL 256

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +M   G+ P+V T+N ++   C +GK++ A  L D M +R V  N  TY+TL+ G C 
Sbjct: 257 YEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQ 316

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++  AE L   M+  G   + +SYN LI+GYC    +++A SL+ +M S G  P++ T
Sbjct: 317 ERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLAT 376

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  E         +  EM+   ++    TY   +D L ++  I +A +++ ++ 
Sbjct: 377 YNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSME 436

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 DI  Y  LI GLC  G ++ A +LF+SL    L  + V YN MI+G C +G   
Sbjct: 437 KAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSY 496

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +A  L  +M EN + PNV  + + I    +  K ++   LL  M E  + P  SI +M+
Sbjct: 497 RALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 555



 Score =  197 bits (500), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 189/364 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +  ++  +I G C+ G++DK   +  QM+   ++P+VV Y +LI G C   D    K+
Sbjct: 161 KLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQ 220

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF++M +  V  +  T+ V+++   K G   +   L + M    + PN +TY++++   C
Sbjct: 221 LFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCC 280

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+N A ELF  M   G   + V+YN LI G C+ + V EA  L   M   G+ P ++
Sbjct: 281 NDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLI 340

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNTL  G   I  ++ A  LF +M+    +   +TYN  I G  +        ++ R +
Sbjct: 341 SYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREM 400

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                      Y  L+D L +S  +E A +++ S+ +  LVAD+  Y ++IHGLC  G M
Sbjct: 401 EARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDM 460

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  LF  ++E  + PN +I+ T+I+G+ +     + + LL +M E  ++P+ +  +  
Sbjct: 461 KEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNST 520

Query: 373 VDLL 376
           + +L
Sbjct: 521 IQIL 524



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 179/359 (49%), Gaps = 1/359 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + + +  II+   +    ++A   F QM G  + P   T+N+L+  L  +N + +A R+F
Sbjct: 94  HVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVF 153

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            E     V+  V +F +++   C+ G +D+   +L  M +  + PN   Y+TL+DG C  
Sbjct: 154 NETKGN-VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKN 212

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G I R ++LF  M  +    +  +Y +LING+ K    ++ + LY +M   GI P V TY
Sbjct: 213 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 272

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N++        ++ +A +LF+EM+   VA +  TYNT I GLC+   ++EA  L   +  
Sbjct: 273 NSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 332

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                ++ +YN LIDG C  G L+ A  LF  +        + TYNI+I G         
Sbjct: 333 DGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAG 392

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
             D+  +ME   ++P+ + +  L+   VR +   K  ++   M++  ++ D  I  +++
Sbjct: 393 VTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLI 451



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 169/326 (51%), Gaps = 1/326 (0%)

Query: 51  VVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD 110
           V+ + ++I+    +    +A   F +M+ +G+ P   TFN ++  L K+   ++A R+ +
Sbjct: 95  VLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN 154

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
              + +V+ + +++  ++ G C  G +++  E+ G ME MG   + V Y  LI+G CKN 
Sbjct: 155 -ETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNG 213

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
           ++E    L+ +M    +     TY  L  G F++   +  ++L+E+M+   +  +  TYN
Sbjct: 214 DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYN 273

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           + I   C +G +  A ELF  +       ++  YN LI GLC+  R+  A  L   + R 
Sbjct: 274 SMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD 333

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
            L  ++++YN +I G C+ G +DKA  LF  M+ +  +P++  +  LI GF      + V
Sbjct: 334 GLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGV 393

Query: 351 IELLHKMKEKKVMPDASIVSMVVDLL 376
            +++ +M+ + + P     ++++D L
Sbjct: 394 TDMVREMEARGLSPSKVTYTILMDAL 419



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 109/225 (48%), Gaps = 35/225 (15%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN ++YNT+IDG C  G +DKA +LF QMK    +P + TYN LI G   A +      +
Sbjct: 337 PNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDM 396

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G+ PS VT+ ++MD L ++  +++A ++   M +  +  + + Y  L+ G C+
Sbjct: 397 VREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCV 456

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM----------- 182
            G +  A +LF S++ M  K +DV YN +I GYCK      AL L +EM           
Sbjct: 457 VGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVAS 516

Query: 183 ------------------------VSKGIKPTVVTYNTLFLGLFE 203
                                   +  G+KP++  +N +    F+
Sbjct: 517 YNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFD 561



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 49/80 (61%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V YNT+I G CKEG   +A  L  +M    + P+V +YNS I  LC    W EA+ 
Sbjct: 476 KPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEV 535

Query: 73  LFFEMMDQGVQPSVVTFNVI 92
           L  +M++ G++PS+  +N+I
Sbjct: 536 LLKDMIELGLKPSISIWNMI 555


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 185/362 (51%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N + YN+++D   ++    + + +   M+ E I   V TY  L+  L  A D ++ + LF
Sbjct: 211 NALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALF 270

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM    V   V  +  +++  C+ G M  A+++LD  V   V PN  TY  L++GFC  
Sbjct: 271 NEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKI 330

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G++  AE L   M+  G   + + +N +I+GYC+   V++AL +   M   G++  + TY
Sbjct: 331 GQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTY 390

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           NTL  GL  +++++ A  L   M    V  +  TY T I   CK+G +VEA  LFR +  
Sbjct: 391 NTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAE 450

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                 +  YN +IDG  K G +  A    + + ++  V DV TY  ++HG C +G++D 
Sbjct: 451 KGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDV 510

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  LF +M++    PNV+ +  LI G  +  +     +L   M +  ++PD S+ S +V 
Sbjct: 511 ALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVG 570

Query: 375 LL 376
            L
Sbjct: 571 SL 572



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 154/295 (52%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           Y  +I+  C+ G + +A  +  +  G  + P+  TY  LI+G C       A+ L  +M 
Sbjct: 285 YTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQ 344

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            QGV  + + FN ++D  C+ G +D+A ++   M +  V  + +TY+TL  G C   +++
Sbjct: 345 GQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLD 404

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A+ L   M  MG   + V+Y  LI+ +CK+ ++ EA  L+REM  KG  P+VVTYN + 
Sbjct: 405 EAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMI 464

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            G  +   +  A +  +EM++     D  TY + + G C NG +  A++LF  +     E
Sbjct: 465 DGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTE 524

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            ++ AY  LI GL K GR E A +L+  + +  L+ D   Y+ ++  L  D + D
Sbjct: 525 PNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKD 579



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 150/309 (48%)

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
           ++ GLC +   ++A+RL  +M   GV  + + +N ++D   +         +L++M    
Sbjct: 183 VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEG 242

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           +     TY+ L+D       I++ E LF  M++     D   Y  +IN YC+   +  A 
Sbjct: 243 IEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAA 302

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            +  E V  G++P   TY  L  G  +I Q+E A  L  +MQ   V  +   +NT IDG 
Sbjct: 303 KVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGY 362

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           C+ G + +A+++   +  +  ELDI  YN L  GLC+  RL+ A  L   +    +V + 
Sbjct: 363 CRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNY 422

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           VTY  +I   C DG M +A  LF +M E    P+V+ +  +I G+ +     +      +
Sbjct: 423 VTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKE 482

Query: 357 MKEKKVMPD 365
           M++K  +PD
Sbjct: 483 MEKKGFVPD 491



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 141/274 (51%), Gaps = 4/274 (1%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G   +PN  TY  +I+G CK G ++ A+ L   M+G+ +  + + +N++I G C     
Sbjct: 309 VGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMV 368

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A ++   M   GV+  + T+N +   LC+  ++DEA  LL +M++  V PN  TY+TL
Sbjct: 369 DDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTL 428

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +   C  G +  A  LF  M   G     V+YN++I+GY K   + EA    +EM  KG 
Sbjct: 429 ISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGF 488

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P V TY +L  G     +V+ ALKLFEEM++     +   Y   I GL K G    A +
Sbjct: 489 VPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQ 548

Query: 248 LFRTLGILKCEL--DIQAYNCLIDGLCKSGRLEI 279
           L+  +  LK  L  D   Y+ L+  L    R ++
Sbjct: 549 LYDDM--LKAGLIPDDSLYSALVGSLHTDNRKDV 580



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 1/136 (0%)

Query: 240 GYIVEAVELF-RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           G + +A  L  R LG     +   A + ++DGLCKSGR++ A  L   +PR  +  + + 
Sbjct: 155 GRLADAAGLLERALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALC 214

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           YN ++          +  ++   ME   +   V  +  L+         SKV  L ++MK
Sbjct: 215 YNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMK 274

Query: 359 EKKVMPDASIVSMVVD 374
              V+ D  + + V++
Sbjct: 275 ANNVVGDVYLYTAVIN 290



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 1/104 (0%)

Query: 274 SGRLEIALELF-RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           +GRL  A  L  R+L         +  ++++ GLC  G++D A  L  DM  + V+ N +
Sbjct: 154 AGRLADAAGLLERALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNAL 213

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            + +L+  +VR     +V E+L  M+ + +       +++VD L
Sbjct: 214 CYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSL 257


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 201/381 (52%), Gaps = 21/381 (5%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +TVTYNT+I G C+ G V++A      M  ++   D +T N L+ G C        +R+ 
Sbjct: 76  DTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIM 135

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             ++  G    V+ FN ++D  CK G+M  A  L++ M +  +  +  +Y+TL++GFC  
Sbjct: 136 DNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKR 195

Query: 135 GKINRAEELFGSM-ESMGCKH--------------------DDVSYNILINGYCKNKEVE 173
           G+ ++A+ L   + ES G K                     D ++Y  +I+ YCK   +E
Sbjct: 196 GEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLE 255

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           EA +LY EM+  G  P VVTY+++  GL +  ++  A +L  EM++  V  +   Y T I
Sbjct: 256 EARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLI 315

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
           D L K G   EA      L +    LD+     L+DGL KS + + A ++FR+L +  L+
Sbjct: 316 DSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLI 375

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            + +TY  +I G C  G M++   L  +MEE  + PNVI + ++I+G+ +     + I +
Sbjct: 376 PNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINV 435

Query: 354 LHKMKEKKVMPDASIVSMVVD 374
           + KM ++ ++P+A + ++++D
Sbjct: 436 MKKMLDQNIIPNAYVYAILID 456



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 200/429 (46%), Gaps = 69/429 (16%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN++TY  +IDG CK G +++ ++L  +M+ ++INP+V+TY+S+I+G       +EA  +
Sbjct: 376 PNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINV 435

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGK-------------------------------- 101
             +M+DQ + P+   + +++D  CK GK                                
Sbjct: 436 MKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKR 495

Query: 102 ---MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK----INRAEEL----------- 143
              MDEA  LL  +  R +  +   Y++LMDGF   GK    +N  EE+           
Sbjct: 496 GKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVT 555

Query: 144 -------------------FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
                              +  M  MG   +  +YNI+I  YCK  E++ AL L+ EM S
Sbjct: 556 YNVLINGLLEHGKYEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKS 615

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
             I P+ +T NTL +GL E  ++E A+ +  EM    +  +   +   ++   K+G    
Sbjct: 616 HKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANA 675

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
            +++   L  +  +++ +AYN LI   C+    + A  + + + R   VAD VTYN +I 
Sbjct: 676 VLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIR 735

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G C    + KA   +  M    V+PN++ +  L+ G +     ++  EL  KMKE  + P
Sbjct: 736 GYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNP 795

Query: 365 DASIVSMVV 373
           DAS    ++
Sbjct: 796 DASTYDTLI 804



 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 189/353 (53%), Gaps = 1/353 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY++I++GLCK+G + +A+ L  +MK   ++P+ V Y +LI  L  A    EA   
Sbjct: 271 PDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFAC 330

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++ +G+   +V    ++D L K+ K  EA  +   + + ++ PN+ TY+ L+DG+C 
Sbjct: 331 QSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCK 390

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G + R E L   ME      + ++Y+ +INGY K   ++EA+++ ++M+ + I P    
Sbjct: 391 VGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYV 450

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G  +  + E A  L+ EM+   +  +   ++  ++ L +   + EA EL + + 
Sbjct: 451 YAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVT 510

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                LD   Y  L+DG  K+G+   AL +   +  + +  DVVTYN++I+GL   G+ +
Sbjct: 511 SRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE 570

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            A  ++  M E  +APN   +  +I  + +  +    +EL ++MK  K+MP +
Sbjct: 571 -AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSS 622



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 193/381 (50%), Gaps = 21/381 (5%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQM-------------------KGENIN--PDVVTYN 55
           V+YNT+I+G CK G  DKAK+L  ++                   K +N+N   D++TY 
Sbjct: 183 VSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYT 242

Query: 56  SLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           ++I   C  +   EA+ L+ EM+  G  P VVT++ I++ LCK+G++ EA  LL  M + 
Sbjct: 243 TIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKM 302

Query: 116 DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
            V PN   Y+TL+D     G    A      +   G   D V    L++G  K+ + +EA
Sbjct: 303 GVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEA 362

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
             ++R +    + P  +TY  L  G  ++  +E    L +EM+   +  +  TY++ I+G
Sbjct: 363 EDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIING 422

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
             K G + EA+ + + +       +   Y  LIDG CK+G+ EIA +L+  +    L  +
Sbjct: 423 YTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVN 482

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
            V ++++++ L    +MD+A +L  D+    +  + + + +L+ GF +  K S  + ++ 
Sbjct: 483 NVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVE 542

Query: 356 KMKEKKVMPDASIVSMVVDLL 376
           +M EK +  D    +++++ L
Sbjct: 543 EMTEKSIPFDVVTYNVLINGL 563



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 183/374 (48%), Gaps = 29/374 (7%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           +G I +   PN  TYN +I   CK+G +D A  L+ +MK   I P  +T N+L+ GL  A
Sbjct: 576 SGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEA 635

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
            +  +A  +  EM   G+ P++V   V+++   K+GK +   ++ + +V   ++ N   Y
Sbjct: 636 GEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAY 695

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + L+  FC      +A  +   M   G   D V+YN LI GYC++  V++AL+ Y +M++
Sbjct: 696 NNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLN 755

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           +G+ P +VTYN L  GL     +    +LF++M+ + +  D STY+T I G  K G   E
Sbjct: 756 EGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKE 815

Query: 245 AVELFRTLGILKCELDIQA-------YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           ++ L+       CE+  Q        YN LI    K G+++ A EL   +  R +     
Sbjct: 816 SIRLY-------CEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSS 868

Query: 298 TYNIMIHGLCN-------DGQMDK-----AHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
           TY+I+I G CN       D  + K     A +L  +M +    P       +   F R  
Sbjct: 869 TYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISSTFAR-- 926

Query: 346 KPSKVIELLHKMKE 359
            P K+++    +KE
Sbjct: 927 -PGKMLDAEKLLKE 939



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 178/357 (49%), Gaps = 1/357 (0%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V Y +++DG  K G    A  +  +M  ++I  DVVTYN LI+GL     + EAK ++  
Sbjct: 519 VNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSG 577

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M++ G+ P+  T+N+++   CK G++D A  L + M    + P++ T +TL+ G    G+
Sbjct: 578 MIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGE 637

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           I +A  +   M  MG   + V + +L+N   K+ +    L ++ ++V  G+K     YN 
Sbjct: 638 IEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNN 697

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L +    +   + A  + + M RD   ADT TYN  I G C++ ++ +A+  +  +    
Sbjct: 698 LIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEG 757

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              +I  YN L+ GL  +G +    ELF  +    L  D  TY+ +I G    G   ++ 
Sbjct: 758 VSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESI 817

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            L+ +M      P    +  LI  F ++ K  +  ELL++M+ + V P +S   +++
Sbjct: 818 RLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILI 874



 Score =  144 bits (363), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 170/343 (49%), Gaps = 1/343 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + VTYN +I+GL + G  + AK+++  M    + P+  TYN +I   C   + + A  L+
Sbjct: 552 DVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELW 610

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM    + PS +T N ++  L + G++++A  +L+ M    + PN   +  L++    +
Sbjct: 611 NEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKS 670

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK N   ++   +  MG K +  +YN LI  +C+ +  ++A S+ + M+  G     VTY
Sbjct: 671 GKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTY 730

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L  G  E   V+ AL  + +M  + V+ +  TYN  + GL   G + E  ELF  +  
Sbjct: 731 NALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKE 790

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D   Y+ LI G  K G  + ++ L+  +  +  V    TYN++I      G+MD+
Sbjct: 791 NGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQ 850

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           A +L  +M+   V P+   +  LI G+  ++K   +   L K+
Sbjct: 851 ARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKI 893



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 153/324 (47%), Gaps = 30/324 (9%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M    + P+++ +N ++      G + +   +   M+   V PN +T++ L+  +C  G 
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +  A +L   + ++  + D V+YN +I G+C++  V +A      MV K      +T N 
Sbjct: 61  LILALDL---LRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI---VEAVELFRTLG 253
           L  G   I   ++  ++ + +       D   +NT IDG CK G +   ++ VE  R  G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALEL--------------FRSLPRRV-------L 292
           +L    DI +YN LI+G CK G  + A  L              F ++  R+       L
Sbjct: 178 LLS---DIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNL 234

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
            AD++TY  +I   C    +++A  L+ +M  N   P+V+ + ++++G  +  + S+  E
Sbjct: 235 EADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQE 294

Query: 353 LLHKMKEKKVMPDASIVSMVVDLL 376
           LL +MK+  V P+    + ++D L
Sbjct: 295 LLREMKKMGVDPNHVAYTTLIDSL 318


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 181/367 (49%), Gaps = 37/367 (10%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN-INPDVVTYNSLIHGLCHANDWNEAK 71
           +PN VTYNT+I G C  G V  A  +  +M+    I P+  TY ++I G C     +EA 
Sbjct: 182 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 241

Query: 72  RLFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           ++F EM+ +G V+P  V +N ++   C  GK+D A    D MV+R V     TY+ L+  
Sbjct: 242 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 301

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
             + G+   A EL   M   G   D  +YNILING+CK   V++AL ++  M  +G++ T
Sbjct: 302 LFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 361

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFE----------------------------------- 215
           VVTY +L   L +  QV+   KLF+                                   
Sbjct: 362 VVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 421

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
           EM++  +A D  TYNT + GLC  G + EA +L   +     + D+  YN LI G    G
Sbjct: 422 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKG 481

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
            ++ AL +   +  +     ++TYN +I GLC +GQ D A ++  +M EN + P+   ++
Sbjct: 482 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 541

Query: 336 TLIHGFV 342
           +LI G  
Sbjct: 542 SLIEGLT 548



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 176/330 (53%), Gaps = 10/330 (3%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           L+ +MK  ++     + + L+  L  A     A  LF +M    +     TFN+++  LC
Sbjct: 110 LYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRHLC 165

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM-ESMGCKHDD 156
             GK    +R L+L+ Q   RPNA TY+T++ GFC  G++  A ++   M E  G   + 
Sbjct: 166 SAGK---PARALELLRQMP-RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQ 221

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKG-IKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
            +Y  +I+G+CK   V+EA+ ++ EM++KG +KP  V YN L  G  +  +++ AL   +
Sbjct: 222 YTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRD 281

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
            M    VA   +TYN  +  L  +G   EA EL   +G     LD+  YN LI+G CK G
Sbjct: 282 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEG 341

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
            ++ ALE+F ++ RR + A VVTY  +I+ L   GQ+ +   LF +     + P+++++ 
Sbjct: 342 NVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYN 401

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            LI+         +  E++ +M++K++ PD
Sbjct: 402 ALINSHSTSGNIDRAFEIMGEMEKKRIAPD 431



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 86/159 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V YN +I+     G +D+A  +  +M+ + I PD VTYN+L+ GLC     +EA++
Sbjct: 394 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARK 453

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  +G+QP +VT+N ++      G + +A R+ + M+ +   P   TY+ L+ G C
Sbjct: 454 LIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 513

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
             G+ + AE +   M   G   DD +Y  LI G     E
Sbjct: 514 KNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 101/213 (47%), Gaps = 22/213 (10%)

Query: 175 ALSLYREMVS--KGIKPTVVTY----------NTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           AL+L++  +S  K + P  V            N L      +     +L+L+  M+   +
Sbjct: 60  ALALFKSALSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSL 119

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
              T++ +  +  L          ++FR    L+  L    +N ++  LC +G+   ALE
Sbjct: 120 PISTASLHPLLSALPSAPAFALFADMFR----LRLPLCTTTFNIMLRHLCSAGKPARALE 175

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN-AVAPNVIIFVTLIHGF 341
           L R +PR     + VTYN +I G C+ G++  A D+  +M E   +APN   + T+I G+
Sbjct: 176 LLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 231

Query: 342 VRINKPSKVIELLHKMKEK-KVMPDASIVSMVV 373
            ++ +  + +++  +M  K +V P+A + + ++
Sbjct: 232 CKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 264


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 197/397 (49%), Gaps = 59/397 (14%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           +GE+G+  KPN VT+N ++ G C+EG +++A++L   MK       + +YN+ + GL   
Sbjct: 283 DGELGLP-KPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRN 341

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
               E + +  EM++ G++P++ ++N++MD LC+N  M +A RL+DLMV   V P+  TY
Sbjct: 342 GKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTY 401

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGC-------------------------------- 152
           +TL+ G+C  GK+  A+ +   M   GC                                
Sbjct: 402 TTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNE 461

Query: 153 ---KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK--------------------- 188
              + D V+ NI++NG C+N E+E+A  +  EM + G                       
Sbjct: 462 KSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTN 521

Query: 189 -PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P V+TY TL  GL ++ ++E A K F EM   ++  D+ TY+TF+   CK G I  A+ 
Sbjct: 522 VPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALR 581

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           + + +    C   +Q YN LI GL   G++     L   +  R +  D+ TYN MI+ LC
Sbjct: 582 VLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLC 641

Query: 308 NDGQMDKAHDLFLDM-EENAVAPNVIIFVTLIHGFVR 343
             G+   A  L  +M ++  V+PNV  F  LI  F +
Sbjct: 642 EGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCK 678



 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 125/423 (29%), Positives = 199/423 (47%), Gaps = 61/423 (14%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V YNT++   CK+   D+A+ L  +M  + + PDVVT+NS I  LC A    EA R+F
Sbjct: 218 NRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIF 277

Query: 75  FEMMDQG----VQPSVVTFNVIMDELCKNGKMDEASRL---------------------- 108
            +M   G     +P+VVTFN+++   C+ G M+EA  L                      
Sbjct: 278 RDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLG 337

Query: 109 -------------LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHD 155
                        LD MV+  + PN ++Y+ +MDG C    +  A  L   M S G   D
Sbjct: 338 LLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPD 397

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
            V+Y  L++GYC   +V EA ++  EM+ KG  P   T NTL   L++  +   A ++ +
Sbjct: 398 TVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQ 457

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR--------TLG-------------- 253
           +M       DT T N  ++GLC+NG + +A E+          +LG              
Sbjct: 458 KMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHN 517

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +     D+  Y  LI+GLCK G+LE A + F  +  + L  D VTY+  +   C  G++ 
Sbjct: 518 VSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKIS 577

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  +  DME N  +  +  + +LI G     +  ++  L+ +M+E+ + PD    + ++
Sbjct: 578 SALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMI 637

Query: 374 DLL 376
           + L
Sbjct: 638 NCL 640



 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 192/381 (50%), Gaps = 28/381 (7%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN  T   ++ G C+ G   +A        G N+N   V YN+L+   C  +  +EA+
Sbjct: 182 CQPNKFTVGILVRGFCRAGRTKQALEFVDGKMGGNVNR--VVYNTLVSSFCKQDMNDEAE 239

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDV---RPNAFTYSTL 127
           +L   M ++G+ P VVTFN  +  LC+ GK+ EASR+  D+ +  ++   +PN  T++ +
Sbjct: 240 KLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLM 299

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + GFC  G +  A  L  +M+  G      SYN  + G  +N ++ E  S+  EMV  GI
Sbjct: 300 LKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGI 359

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P + +YN +  GL   H +  A +L + M  + V  DT TY T + G C  G + EA  
Sbjct: 360 EPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKA 419

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +   +    C  +    N L++ L K GR   A E+ + +  +    D VT NI+++GLC
Sbjct: 420 ILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLC 479

Query: 308 NDGQMDKAHDLFLDM---------EENAVA-------------PNVIIFVTLIHGFVRIN 345
            +G+++KA ++  +M         +EN VA             P+VI + TLI+G  ++ 
Sbjct: 480 RNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVG 539

Query: 346 KPSKVIELLHKMKEKKVMPDA 366
           K  +  +   +M  K + PD+
Sbjct: 540 KLEEAKKKFIEMMAKNLHPDS 560



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 174/344 (50%), Gaps = 6/344 (1%)

Query: 37  ALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
           +L+  M    +NP+  T+N LI  LC +N  + A+ LF +M ++G QP+  T  +++   
Sbjct: 137 SLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGF 196

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           C+ G+  +A   +D  +  +V  N   Y+TL+  FC     + AE+L   M   G   D 
Sbjct: 197 CRAGRTKQALEFVDGKMGGNV--NRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDV 254

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKG----IKPTVVTYNTLFLGLFEIHQVEHALK 212
           V++N  I+  C+  +V EA  ++R+M   G     KP VVT+N +  G  +   +E A  
Sbjct: 255 VTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARS 314

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           L E M++        +YNT++ GL +NG ++E   +   +     E +I +YN ++DGLC
Sbjct: 315 LVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLC 374

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           ++  +  A  L   +    +  D VTY  ++HG C+ G++ +A  +  +M      PN  
Sbjct: 375 RNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTY 434

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              TL++   +  + S+  E+L KM EK    D    ++VV+ L
Sbjct: 435 TCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGL 478



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 171/365 (46%), Gaps = 24/365 (6%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNT T NT+++ L KEG   +A+ +  +M  ++   D VT N +++GLC   +  +A 
Sbjct: 429 CHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKAS 488

Query: 72  RLFFEMMDQGVQ----------------------PSVVTFNVIMDELCKNGKMDEASRLL 109
            +  EM   G                        P V+T+  +++ LCK GK++EA +  
Sbjct: 489 EVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKF 548

Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
             M+ +++ P++ TY T +  FC  GKI+ A  +   ME  GC     +YN LI G    
Sbjct: 549 IEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSK 608

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTST 228
            ++ E   L  EM  +GI P + TYN +   L E  + + A  L  EM  +  V+ + S+
Sbjct: 609 GQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSS 668

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           +   I   CK+G    A ELF  + +  C      Y+ + + L   G+L  A ELF +  
Sbjct: 669 FKILIKAFCKSGDFKVACELF-DVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASL 727

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
            R L++    Y  +I  LC DG++D AH L   + +     +   F+ +I G  +     
Sbjct: 728 ERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQ 787

Query: 349 KVIEL 353
           +  EL
Sbjct: 788 QADEL 792



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 129/275 (46%), Gaps = 37/275 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTY------------------- 54
           P+ +TY T+I+GLCK G +++AK  F++M  +N++PD VTY                   
Sbjct: 523 PDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRV 582

Query: 55  ----------------NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                           NSLI GL       E   L  EM ++G+ P + T+N +++ LC+
Sbjct: 583 LKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCE 642

Query: 99  NGKMDEASRLLDLMVQRDV-RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
            GK  +A+ LL  M+ + V  PN  ++  L+  FC +G    A ELF    S+ C H + 
Sbjct: 643 GGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSV-CGHKEA 701

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            Y+++ N      ++ +A  L+   + + +      Y  L   L +  +++ A  L +++
Sbjct: 702 LYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKL 761

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
                  D S++   IDGL K G   +A EL R +
Sbjct: 762 IDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIM 796



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 82/182 (45%), Gaps = 36/182 (19%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENI-NPDVVTYNSLIHGLCHANDW----- 67
           P+  TYN +I+ LC+ G    A +L  +M  + + +P+V ++  LI   C + D+     
Sbjct: 628 PDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACE 687

Query: 68  -----------------------------NEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                                        ++AK LF   +++ +      +  ++D+LCK
Sbjct: 688 LFDVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCK 747

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSME-SMGCKHDDV 157
           +G++D+A  LL  ++ +    +  ++  ++DG    G   +A+EL   ME ++  K  D 
Sbjct: 748 DGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIMELALEDKTSDR 807

Query: 158 SY 159
           +Y
Sbjct: 808 TY 809



 Score = 44.7 bits (104), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 20/82 (24%), Positives = 36/82 (43%)

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           +  R      L+  + +  +  +  T+N++I  LC    +D A +LF  M E    PN  
Sbjct: 128 QQNRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKF 187

Query: 333 IFVTLIHGFVRINKPSKVIELL 354
               L+ GF R  +  + +E +
Sbjct: 188 TVGILVRGFCRAGRTKQALEFV 209


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 192/389 (49%), Gaps = 36/389 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TYN ++DGLCK G   +   ++ +M   N+ PDV+TY  LIHGLC + D + A R
Sbjct: 261 RPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAAR 320

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL--------------------- 111
           ++ E++  G+      +N ++   C+ G++ EA +  D                      
Sbjct: 321 VYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFD 380

Query: 112 ------------MVQRDVR--PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
                       ++++DV   P+  T+ TL+ G C  G  N+A  +F      G + D  
Sbjct: 381 SGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVF 440

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           SY+ +ING C    + +A+ +Y +M   G KP    YN L  G  ++++   A++++ +M
Sbjct: 441 SYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKM 500

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
             +  +    TYNT IDGLCK     EA  + R +       DI  Y  LI GL    ++
Sbjct: 501 ADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKI 560

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA-VAPNVIIFVT 336
           + AL +++ +  + L  DV+ +NI+IHGLC+ G++D+A  +F DM+E     PN++ + T
Sbjct: 561 DDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNT 620

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           L+ G        K   L   + E  + PD
Sbjct: 621 LMDGLYETGYIDKAATLWTSITEDGLEPD 649



 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 192/398 (48%), Gaps = 38/398 (9%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           +G  G    PN  TYN ++  LC  G +D+A  LF  ++   + PD +TY++L+ GL   
Sbjct: 147 HGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQ 206

Query: 65  NDWNEAKRLFFEMMDQGVQPSVV------------------------------------T 88
           +  + A  L  EM    VQP VV                                    T
Sbjct: 207 DRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLAT 266

Query: 89  FNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSME 148
           +NV++D LCK G+  E   + + MV  +++P+  TY  L+ G C +G ++ A  ++  + 
Sbjct: 267 YNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEII 326

Query: 149 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 208
             G   D   YN L+ G+C+   V+EA   +      G++  + TYN +  GLF+   V+
Sbjct: 327 KTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVD 385

Query: 209 HALKLFEEMQRDDVA-ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
            A++L++ +++D     DT T+ T I GLC+NG+  +A  +F    +   +LD+ +Y+ +
Sbjct: 386 EAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSM 445

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           I+GLC  GRL  A++++  + +     +   YN +I G C   +   A  ++  M +N  
Sbjct: 446 INGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGC 505

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +P VI + TLI G  +  K  +   +  +M E    PD
Sbjct: 506 SPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPD 543



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 180/331 (54%), Gaps = 2/331 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALF-LQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           N  TYN +I GL   G VD+A  L+ L  K     PD VT+ +LIHGLC     N+A  +
Sbjct: 367 NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTI 426

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E    G Q  V +++ +++ LC  G++ +A ++ + M +   +PN+  Y+ L+ GFC 
Sbjct: 427 FEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQ 486

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             + + A  ++  M   GC    ++YN LI+G CK ++ +EA S+ REMV  G  P + T
Sbjct: 487 VYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITT 546

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +L  GLF   +++ AL +++++    +  D   +N  I GLC  G + EA+ +F  + 
Sbjct: 547 YGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMK 606

Query: 254 ILK-CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             K C  ++  YN L+DGL ++G ++ A  L+ S+    L  D+++YN  I GLC+  ++
Sbjct: 607 EKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRI 666

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            +   L  ++    + P VI +  L+   ++
Sbjct: 667 HEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 201/389 (51%), Gaps = 38/389 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TY+T++ GL K+  +D A  L  +M    + PDVV YN+L+ G   A ++ +  R+
Sbjct: 191 PDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRV 250

Query: 74  FFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           + +++ D G +P++ T+NV++D LCK G+  E   + + MV  +++P+  TY  L+ G C
Sbjct: 251 WDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLC 310

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G ++ A  ++  +   G   D   YN L+ G+C+   V+EA   +      G++  + 
Sbjct: 311 RSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLR 369

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVA-ADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           TYN +  GLF+   V+ A++L++ +++D     DT T+ T I GLC+NG+  +A  +F  
Sbjct: 370 TYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEE 429

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR---------------------- 289
             +   +LD+ +Y+ +I+GLC  GRL  A++++  + +                      
Sbjct: 430 ARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYR 489

Query: 290 -----RVL--VAD------VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
                R+   +AD      V+TYN +I GLC   +  +A  +  +M EN   P++  + +
Sbjct: 490 TSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGS 549

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LI G     K    + +  ++  K +  D
Sbjct: 550 LIRGLFSDKKIDDALSIWKQILYKGLKVD 578



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 169/307 (55%), Gaps = 1/307 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E  V C P+TVT+ T+I GLC+ GF +KA  +F + +      DV +Y+S+I+GLC+   
Sbjct: 395 EKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGR 454

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A +++ +M   G +P+   +N ++   C+  +  +A R+   M      P   TY+T
Sbjct: 455 LVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNT 514

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+DG C   K   A  +   M   G   D  +Y  LI G   +K++++ALS++++++ KG
Sbjct: 515 LIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKG 574

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           +K  V+ +N L  GL    +V+ AL +F +M ++ +   +  TYNT +DGL + GYI +A
Sbjct: 575 LKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKA 634

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             L+ ++     E DI +YN  I GLC   R+   ++L   +  R ++  V+T+NI++  
Sbjct: 635 ATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRA 694

Query: 306 LCNDGQM 312
           +   G +
Sbjct: 695 VIKYGPI 701



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 119/240 (49%), Gaps = 6/240 (2%)

Query: 140 AEELFGSMES-MGCKHDDVSYNILINGYCKNKEVEEA----LSLYREMVSKGIKPTVVTY 194
           A + F ++ S +GC     S+N L++ + + +   +A     SL      + I P + TY
Sbjct: 102 ALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTY 161

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N +   L     ++ A+ LF+ ++R  VA D  TY+T + GL K   +  A++L   +  
Sbjct: 162 NIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPR 221

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV-ADVVTYNIMIHGLCNDGQMD 313
            + + D+  YN L+ G  K+G  E  + ++  L +      ++ TYN+M+ GLC  G+  
Sbjct: 222 SRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFK 281

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +  +++  M  N + P+VI +  LIHG  R         +  ++ +  ++ DA++ + +V
Sbjct: 282 EVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLV 341


>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
 gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
          Length = 690

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/371 (33%), Positives = 190/371 (51%), Gaps = 10/371 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN---PDVVTYNSLIHGLCHANDWNE 69
           +P+ VT NT++DGLCK G V +A A F++ +  +++   P+ VTYN LI   C   + + 
Sbjct: 206 RPDVVTLNTVVDGLCKSGRVQEALA-FVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISM 264

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP----NAFTYS 125
           A  L  +M ++GV  ++VT N I+  LC+ G+   A  L     +R V P    NA TYS
Sbjct: 265 AYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAA--LEFFREKRTVWPEGKGNAVTYS 322

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+     T  +  A ELF    S G   D + Y  +I+G  +   +E+A S+   M   
Sbjct: 323 TLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEA 382

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G K     YN L  G     ++  A +L +EM+   +  D  TYNT + G CK G     
Sbjct: 383 GFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAV 442

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            EL   +    C+  +  +  L+ G CK G+++ AL + RS+    +  + V YN +I  
Sbjct: 443 DELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDF 502

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC  G +D A +LF +M+E +V  NV  F  L+ G    N P K  EL+ +M+E++  PD
Sbjct: 503 LCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPD 562

Query: 366 ASIVSMVVDLL 376
              V ++++ L
Sbjct: 563 YVTVDVLMEWL 573



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 188/369 (50%), Gaps = 13/369 (3%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKG-ENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
            +N+I+  L +   V     ++  M+G  ++ PDVVTY  L++GLC A    +A R+   
Sbjct: 138 AFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDG 197

Query: 77  MMDQ--GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR-----DVRPNAFTYSTLMD 129
           M  Q   ++P VVT N ++D LCK+G++ EA   L  + QR        PN  TY+ L+D
Sbjct: 198 MSRQDLDIRPDVVTLNTVVDGLCKSGRVQEA---LAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE--MVSKGI 187
            FC  G I+ A EL   ME+ G   + V+ N ++ G C+      AL  +RE   V    
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           K   VTY+TL   L   + V  A++LF E   +  + D   Y T I GL + G + +A  
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACS 374

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +  ++     +LD +AYN LI G C+  RL  A EL + +    +  DV TYN ++ G C
Sbjct: 375 MASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSC 434

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G      +L   M ++   P+VI F TL+HG+ ++ K  + + +L  M E  + P+  
Sbjct: 435 KAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNV 494

Query: 368 IVSMVVDLL 376
           I + ++D L
Sbjct: 495 IYNTLIDFL 503



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 166/332 (50%), Gaps = 6/332 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNTVTYN +ID  C+ G +  A  L  +M+ E +  ++VT N+++ GLC A     A 
Sbjct: 242 CPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAAL 301

Query: 72  RLFFEMMDQGVQP----SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             F E   + V P    + VT++ ++  L     +  A  L    +     P+A  Y T+
Sbjct: 302 EFFRE--KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTM 359

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G    G++  A  +  SM+  G K D  +YNILI G+C+ K + EA  L +EM   GI
Sbjct: 360 ISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGI 419

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P V TYNTL  G  +        +L  +M  D       T+ T + G CK G I EA+ 
Sbjct: 420 RPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALR 479

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           + R++       +   YN LID LCK G +++A+ELF  +  + + A+V T+N ++ GL 
Sbjct: 480 ILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLR 539

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           +    +KA +L   M E    P+ +    L+ 
Sbjct: 540 DKNMPEKAFELMDQMREERCFPDYVTVDVLME 571


>gi|255661032|gb|ACU25685.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 373

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/352 (32%), Positives = 189/352 (53%), Gaps = 9/352 (2%)

Query: 27  CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           C+ G +D A+ ++ +M    ++PD V YN++++G   A    +   L+ E+M +    +V
Sbjct: 1   CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELW-ELMGREDSQNV 59

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
           V+FN++M  L  NG +D+A  + +LM Q     ++ TY  L+DGFC  G IN++  + G 
Sbjct: 60  VSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGI 119

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
            E  G   D  +Y+ +ING CK  +++EA+S+   M+  G  P    YNTL  G   + +
Sbjct: 120 AEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSK 179

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQA 263
            + A+++F EM   + +    TYNT I+GLCK     EA +L + +   G   C   +  
Sbjct: 180 FDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPC---VIT 236

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
           Y+ L+ GLC+  ++E+AL+L+  +    L  DV   NI+IHGLC+ G+   A  L+ DM 
Sbjct: 237 YSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMN 296

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
               APN++   TL+ GF +       + +  ++    + PD  IVS  + L
Sbjct: 297 RWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPD--IVSYNITL 346



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 166/316 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V++N ++ GL   G VDKA +++  M       D  TY  L+ G C     N++ R+ 
Sbjct: 58  NVVSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVL 117

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
               ++G       ++ +++ LCK  K+DEA  +L+ M++    PNA  Y+TL++GF   
Sbjct: 118 GIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGV 177

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            K + A  +F  M S  C    V+YN LING CK +   EA  L +EM+ KG KP V+TY
Sbjct: 178 SKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITY 237

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + L  GL + H+VE AL+L+ ++  + +  D    N  I GLC  G    A+ L+  +  
Sbjct: 238 SLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNR 297

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C  ++  +N L++G  K G +  AL ++  + R  L  D+V+YNI + GLC+  ++  
Sbjct: 298 WNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISF 357

Query: 315 AHDLFLDMEENAVAPN 330
           A     D     +AP+
Sbjct: 358 AILFLQDALAKKIAPS 373



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 119/219 (54%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           NG I     PN   YNT+I+G       D A  +F +M   N +P VVTYN+LI+GLC  
Sbjct: 153 NGMIKNGGTPNAHVYNTLINGFVGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKG 212

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
             + EA  L  EM+++G +P V+T++++M  LC+  K++ A +L + ++   ++P+    
Sbjct: 213 ERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQML 272

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + L+ G C  GK   A  L+  M    C  + V++N L+ G+ K+ ++  AL ++  ++ 
Sbjct: 273 NILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILR 332

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVA 223
            G++P +V+YN    GL    ++  A+   ++     +A
Sbjct: 333 NGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIA 371



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 96/179 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  VTYNT+I+GLCK     +A  L  +M  +   P V+TY+ L+ GLC  +    A 
Sbjct: 195 CSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMAL 254

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L+ +++  G++P V   N+++  LC  GK   A  L   M + +  PN  T++TLM+GF
Sbjct: 255 QLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGF 314

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
              G I  A  ++  +   G + D VSYNI + G C    +  A+   ++ ++K I P+
Sbjct: 315 YKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIAPS 373


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 186/352 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY+ +I G CK+G V+K   L  +MK  N+ P +V+Y+SL HGLC     + +  +
Sbjct: 358 PDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDI 417

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F ++   G +     +++++   C  G +D A +L++ MV+ ++ P+   + +L+ GFC 
Sbjct: 418 FRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCK 477

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G    A E F  M   G      + N++I+ +C+   VEEAL+L  EM ++GI P + T
Sbjct: 478 MGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFT 537

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +   L +  + E AL+LF  M + +V      Y+T IDG  K     +A+ L+  + 
Sbjct: 538 YNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARML 597

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +    D+ AY  LI+ LC   R+  A  LF+ +    +  D ++Y  +I G C  G M 
Sbjct: 598 KIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMR 657

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           KA  LF +M +    P V+ + +L+ G+ ++N+      L+ +MK K + PD
Sbjct: 658 KAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPD 709



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 195/405 (48%), Gaps = 40/405 (9%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           NGE      P  VTY+T I GLC+ G+V+ A      +   N   +V  YN++IHGLC  
Sbjct: 284 NGE-----SPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKK 338

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
            + +EA ++  EM   G+ P V T+++++   CK G +++   L++ M   ++ P+  +Y
Sbjct: 339 GELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSY 398

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           S+L  G C     + + ++F  + + G K+D  +Y+ILI G+C   +++ A  L  EMV 
Sbjct: 399 SSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVR 458

Query: 185 K-----------------------------------GIKPTVVTYNTLFLGLFEIHQVEH 209
                                               GI P++ T N +        +VE 
Sbjct: 459 NNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEE 518

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           AL L  EMQ   +  +  TYN  I+ LCK      A+ELF  +        +  Y+ LID
Sbjct: 519 ALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLID 578

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           G  K    + AL L+  + +  +  D+V Y I+I+ LC+  +M +A++LF  M EN + P
Sbjct: 579 GFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTP 638

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + I + ++I GF RI    K   L ++M ++  +P     + +VD
Sbjct: 639 DKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVD 683



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 176/360 (48%), Gaps = 35/360 (9%)

Query: 13  KPNTVTYNTIIDGLCK-----------------------------------EGFVDKAKA 37
           +P+ V+Y+++  GLCK                                   +G +D A  
Sbjct: 392 EPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHK 451

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           L  +M   N+ PD   + SL+HG C    W  A   F  M++ G+ PS+ T NVI+D  C
Sbjct: 452 LMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHC 511

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           + G+++EA  L++ M  + + PN FTY+ +++  C   K  RA ELF  M         V
Sbjct: 512 REGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVV 571

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            Y+ LI+G+ K    ++AL LY  M+  G+ P +V Y  L   L    ++  A  LF++M
Sbjct: 572 VYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKM 631

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
             + +  D  +Y + I G C+ G + +A  LF  +        +  Y  L+DG CK  R+
Sbjct: 632 TENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRI 691

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           +IA  L   + R+ +  DVVTYN++I      G +DKA ++  +M+EN V P+ + ++ L
Sbjct: 692 DIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 206/406 (50%), Gaps = 47/406 (11%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN------DWN 68
           +T + N ++  L +    +  ++LF +MK     P+V TY  +++  C  N      D  
Sbjct: 213 STRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTR 272

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  +  EM   G  P+VVT++  +  LC+ G ++ A   +  ++  +   N + Y+ ++
Sbjct: 273 QATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAII 332

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C  G+++ A ++   M+S G   D  +Y+ILI+G+CK  +VE+ L L  EM    ++
Sbjct: 333 HGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNME 392

Query: 189 PTVVTYNTLFLGL--------------------FEIHQVEHAL---------------KL 213
           P++V+Y++LF GL                    ++  Q  +++               KL
Sbjct: 393 PSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKL 452

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDG 270
            EEM R+++A D S + + + G CK G  V A+E F  +   GIL     I   N +ID 
Sbjct: 453 MEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILP---SIATCNVIIDA 509

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
            C+ GR+E AL L   +  + +  ++ TYN +I+ LC + + ++A +LF  M +  V P+
Sbjct: 510 HCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPS 569

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           V+++ TLI GF + +   K + L  +M +  V PD    ++++++L
Sbjct: 570 VVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINIL 615



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 176/368 (47%), Gaps = 6/368 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + + ++ +I        ++ A  +FLQ K   +     + N L+  L  AN     + LF
Sbjct: 178 SVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLF 237

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKN--GKMD----EASRLLDLMVQRDVRPNAFTYSTLM 128
            EM   G  P+V T+ ++M+  CK   G+ D    +A+ +L+ M +    P   TYST +
Sbjct: 238 EEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYI 297

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C  G +  A +   S+ S     +   YN +I+G CK  E++EAL +  EM S GI 
Sbjct: 298 YGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGIS 357

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P V TY+ L  G  +   VE  L L EEM+  ++     +Y++   GLCK      ++++
Sbjct: 358 PDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDI 417

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           FR LG    + D  AY+ LI G C  G L+ A +L   + R  L  D   +  ++HG C 
Sbjct: 418 FRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCK 477

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G    A + F  M E  + P++     +I    R  +  + + L+++M+ + + P+   
Sbjct: 478 MGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFT 537

Query: 369 VSMVVDLL 376
            + V++ L
Sbjct: 538 YNAVINRL 545



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 132/265 (49%), Gaps = 11/265 (4%)

Query: 89  FNVIMDELCKNGKMD-EASRLLDLMVQ--RDVRPNAFTYSTLMDGFCLTGKINRAEELFG 145
           + ++ D +C   K++ +A  L  ++++  +D   +   +  L+  F     +  A ++F 
Sbjct: 144 YALLRDIVCYYNKVNLDAFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFL 203

Query: 146 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF------- 198
             +  G +    S N L+    +    E   SL+ EM S G  P V TY  +        
Sbjct: 204 QAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGN 263

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            G  +I     A ++ EEM+R+  +    TY+T+I GLC+ GY+  A++  R+L      
Sbjct: 264 FGEADI-DTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGL 322

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
           +++  YN +I GLCK G L+ AL++   +    +  DV TY+I+IHG C  G ++K   L
Sbjct: 323 VNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYL 382

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVR 343
             +M+ + + P+++ + +L HG  +
Sbjct: 383 IEEMKYSNMEPSLVSYSSLFHGLCK 407


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/331 (33%), Positives = 180/331 (54%), Gaps = 3/331 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVTYNSLIHGLCHANDWNEAK 71
           PN  TY T+I G CK G VD+A  +F +M  KGE + P+ V YN+LI G C     + A 
Sbjct: 553 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE-VKPEAVMYNALIGGYCDQGKLDTAL 611

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                M+++GV  +V T+N+++  L  +G+  EA  L++ M  + + P+ FTY+ L++G 
Sbjct: 612 LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGH 671

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + +A E+F +M   G +   V+Y  LI    K  +V+E   L+ E V +GI+P +
Sbjct: 672 CKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL 731

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YN L         ++ A ++  EM++  +A D  TYNT + GLC  G + EA +L   
Sbjct: 732 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 791

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D+  YN LI G    G ++ AL +   +  +     ++TYN +I GLC +GQ
Sbjct: 792 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 851

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
            D A ++  +M EN + P+   +++LI G  
Sbjct: 852 GDDAENMVKEMVENGITPDDSTYISLIEGLT 882



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 175/351 (49%), Gaps = 6/351 (1%)

Query: 16  TVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFF 75
           T T+N ++  LC  G   +A  L  QM      P+ VTYN++I G C       A  +  
Sbjct: 488 TTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMR 543

Query: 76  EMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR-DVRPNAFTYSTLMDGFCL 133
           EM ++ G+ P+  T+  ++   CK G++DEA ++ D M+ + +V+P A  Y+ L+ G+C 
Sbjct: 544 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 603

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A      M   G      +YN+L++    +    EA  L  EM  KG+ P V T
Sbjct: 604 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 663

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +   V+ AL++FE M R  V A   TY   I  L K G + E  +LF    
Sbjct: 664 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 723

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+  YN LI+    SG ++ A E+   + ++ +  D VTYN ++ GLC  G++D
Sbjct: 724 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 783

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           +A  L  +M E  + P+++ + TLI G+         + + ++M  K   P
Sbjct: 784 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 834



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 175/330 (53%), Gaps = 10/330 (3%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           L+ +MK  ++     + + L+  L  A     A  LF +M    +     TFN+++  LC
Sbjct: 444 LYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRHLC 499

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM-ESMGCKHDD 156
             GK    +R L+L+ Q   RPNA TY+T++ GFC  G++  A ++   M E  G   + 
Sbjct: 500 SAGK---PARALELLRQMP-RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQ 555

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKG-IKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
            +Y  +I+G+CK   V+EA+ ++ EM++KG +KP  V YN L  G  +  +++ AL   +
Sbjct: 556 YTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRD 615

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
            M    VA   +TYN  +  L  +G   EA EL   +G      D+  YN LI+G CK G
Sbjct: 616 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEG 675

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
            ++ ALE+F ++ RR + A VVTY  +I+ L   GQ+ +   LF +     + P+++++ 
Sbjct: 676 NVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYN 735

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            LI+         +  E++ +M++K++ PD
Sbjct: 736 ALINSHSTSGNIDRAFEIMGEMEKKRIAPD 765



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 87/159 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V YN +I+     G +D+A  +  +M+ + I PD VTYN+L+ GLC     +EA++
Sbjct: 728 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARK 787

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM ++G+QP +VT+N ++      G + +A R+ + M+ +   P   TY+ L+ G C
Sbjct: 788 LIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 847

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
             G+ + AE +   M   G   DD +Y  LI G     E
Sbjct: 848 KNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 886



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 102/213 (47%), Gaps = 22/213 (10%)

Query: 175 ALSLYREMVS--KGIKPTVVTY----------NTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           AL+L++ ++S  K + P  V            N L      +     +L+L+  M+   +
Sbjct: 394 ALALFKSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSL 453

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
              T++ +  +  L          ++FR    L+  L    +N ++  LC +G+   ALE
Sbjct: 454 PISTASLHPLLSALPSAPAFALFADMFR----LRLPLCTTTFNIMLRHLCSAGKPARALE 509

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN-AVAPNVIIFVTLIHGF 341
           L R +PR     + VTYN +I G C+ G++  A D+  +M E   +APN   + T+I G+
Sbjct: 510 LLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 565

Query: 342 VRINKPSKVIELLHKMKEK-KVMPDASIVSMVV 373
            ++ +  + +++  +M  K +V P+A + + ++
Sbjct: 566 CKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 598


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 195/364 (53%), Gaps = 1/364 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V+Y ++I  LCK G + +A+ LF QM+ E   P    YN++I G   A  + +A +
Sbjct: 15  KPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYK 74

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   + ++G  PSVV+FN I+  L K  K+DEA  L ++M ++D  PN+ TY+ ++D  C
Sbjct: 75  LLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDMLC 133

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G++  A  +   ME      + ++ NI+++  CK +++EEA  ++     +G  P  V
Sbjct: 134 LGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCV 193

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY +L  GL +  QV+ A +LFE+M      A+   Y + I     +G   +  ++F+ L
Sbjct: 194 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKEL 253

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C+ D+   N  +D + K+G +E    +F  +     + DV +Y+I+IHGL   GQ 
Sbjct: 254 IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQA 313

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +  ++F  M++   A +   +  ++ GF +  K  K  E+L +MKEK V P  +    +
Sbjct: 314 RETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAI 373

Query: 373 VDLL 376
           VD L
Sbjct: 374 VDGL 377



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 196/365 (53%), Gaps = 1/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V++N+I+  L K+  VD+A +LF  MK ++  P+  TYN +I  LC      EA 
Sbjct: 84  CIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAY 142

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R+  EM    + P+++T N+++D LCK  K++EA ++ +   QR   P+  TY +L+DG 
Sbjct: 143 RILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGL 202

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+++ A  LF  M   G   + V Y  LI  +  +   E+   +++E++ +G KP +
Sbjct: 203 GKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDL 262

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
              NT    +F+  +VE    +FE+++      D  +Y+  I GL K G   E   +F  
Sbjct: 263 TLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHA 322

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +      LD +AYN ++DG CKSG++  A E+   +  + +   V TY  ++ GL    +
Sbjct: 323 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 382

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A+ LF + +   +  NV+++ +LI GF ++ +  +   +L +M +K + P+    + 
Sbjct: 383 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 442

Query: 372 VVDLL 376
           ++D L
Sbjct: 443 LLDAL 447



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 191/365 (52%), Gaps = 4/365 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVTYNSLIHGLCHANDWNE 69
           C P+ VTY ++IDGL K+G VD+A  LF +M   G N NP  V Y SLI          +
Sbjct: 188 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP--VVYTSLIRNFFIHGRKED 245

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
             ++F E++ +G +P +   N  MD + K G++++   + + +      P+  +YS L+ 
Sbjct: 246 GHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIH 305

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G    G+      +F +M+  G   D  +YN +++G+CK+ +V +A  +  EM  K ++P
Sbjct: 306 GLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQP 365

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           TV TY  +  GL +I +++ A  LFEE +   +  +   Y++ IDG  K G I EA  + 
Sbjct: 366 TVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLIL 425

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +       ++  +N L+D L K+  +  AL  F+S+       +  TY+I+I+GLC  
Sbjct: 426 EEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRV 485

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            + +KA   + DM++  + PNV+ + T+I G  ++   +    L  + K    +PDA+  
Sbjct: 486 QKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASF 545

Query: 370 SMVVD 374
           + +++
Sbjct: 546 NALIE 550



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 187/364 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN+ TYN IID LC  G V++A  +  +M+  ++ P+++T N ++  LC A    EA +
Sbjct: 119 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYK 178

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F     +G  P  VT+  ++D L K G++DEA RL + M+      N   Y++L+  F 
Sbjct: 179 IFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFF 238

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + G+     ++F  +   GCK D    N  ++   K  EVE+   ++ ++ S G  P V 
Sbjct: 239 IHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVR 298

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y+ L  GL +  Q      +F  M++   A D   YN  +DG CK+G + +A E+   +
Sbjct: 299 SYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM 358

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +  +  Y  ++DGL K  RL+ A  LF     + +  +VV Y+ +I G    G++
Sbjct: 359 KEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRI 418

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A+ +  +M +  + PNV  + +L+   V+  + ++ +     MKE K  P+    S++
Sbjct: 419 DEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSIL 478

Query: 373 VDLL 376
           ++ L
Sbjct: 479 INGL 482



 Score =  167 bits (423), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 35/335 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+    NT +D + K G V+K + +F  ++     PDV +Y+ LIHGL  A    E  
Sbjct: 258 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETS 317

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M  QG       +N ++D  CK+GK+ +A  +L+ M ++ V+P   TY  ++DG 
Sbjct: 318 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 377

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +++ A  LF   +S G + + V Y+ LI+G+ K   ++EA  +  EM+ KG+ P V
Sbjct: 378 AKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 437

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+N+L   L +  ++  AL  F+ M+      +T TY+  I+GLC+             
Sbjct: 438 YTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCR------------- 484

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                    +Q YN              A   ++ + ++ LV +VVTY  MI GL   G 
Sbjct: 485 ---------VQKYN-------------KAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGN 522

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +  A+ LF   + N   P+   F  LI G    N+
Sbjct: 523 ITDAYSLFERFKANGGIPDAASFNALIEGMSNANR 557



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 134/230 (58%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
            YN ++DG CK G V KA  +  +MK + + P V TY +++ GL   +  +EA  LF E 
Sbjct: 334 AYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEA 393

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
             +G++ +VV ++ ++D   K G++DEA  +L+ M+++ + PN +T+++L+D      +I
Sbjct: 394 KSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEI 453

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           N A   F SM+ M C  +  +Y+ILING C+ ++  +A   +++M  +G+ P VVTY T+
Sbjct: 454 NEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTM 513

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
             GL ++  +  A  LFE  + +    D +++N  I+G+      +EA +
Sbjct: 514 ISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 563



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 155/340 (45%), Gaps = 36/340 (10%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A + F E+  QG++P  V++  ++  LCK G++ EA  L   M      P A+ Y+T++ 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+   G+   A +L   +   GC    VS+N ++    K ++V+EALSL+ E++ K  +P
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEP 120

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
              TYN +   L    +VE A ++ +EM+   +  +  T N  +D LCK   + EA ++F
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY-----NIMIH 304
            +     C  D   Y  LIDGL K G+++ A  LF  +      A+ V Y     N  IH
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240

Query: 305 GLCND------------------------------GQMDKAHDLFLDMEENAVAPNVIIF 334
           G   D                              G+++K   +F D+      P+V  +
Sbjct: 241 GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 300

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             LIHG  +  +  +   + H MK++    DA   + VVD
Sbjct: 301 SILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVD 340



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 2/92 (2%)

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           +A + F  L  + L  D V+Y  MI  LC  G++ +A +LF  ME     P    + T+I
Sbjct: 1   MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            G+    +     +LL +++E+  +P  S+VS
Sbjct: 61  MGYGSAGRFEDAYKLLERLRERGCIP--SVVS 90


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 192/389 (49%), Gaps = 36/389 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TYN ++DGLCK G   +   ++ +M   N+ PDV+TY  LIHGLC + D + A R
Sbjct: 261 RPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAAR 320

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL--------------------- 111
           ++ E++  G+      +N ++   C+ G++ EA +  D                      
Sbjct: 321 VYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFD 380

Query: 112 ------------MVQRDVR--PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
                       ++++DV   P+  T+ TL+ G C  G  N+A  +F      G + D  
Sbjct: 381 SGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVF 440

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           SY+ +ING C    + +A+ +Y +M   G KP    YN L  G  ++++   A++++ +M
Sbjct: 441 SYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKM 500

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
             +  +    TYNT IDGLCK     EA  + R +       DI  Y  LI GL    ++
Sbjct: 501 ADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKI 560

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA-VAPNVIIFVT 336
           + AL +++ +  + L  DV+ +NI+IHGLC+ G++D+A  +F DM+E     PN++ + T
Sbjct: 561 DDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNT 620

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           L+ G        K   L   + E  + PD
Sbjct: 621 LMDGLYETGYIDKAATLWTSITEDGLEPD 649



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 193/398 (48%), Gaps = 38/398 (9%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           +G  G    PN  TYN ++  LC  G +D+A  LF  ++   + PD +TY++L+ GL   
Sbjct: 147 HGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQ 206

Query: 65  NDWNEAKRLFFEMMDQGVQPSVV------------------------------------T 88
           +  + A  L  EM   GVQP VV                                    T
Sbjct: 207 DRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLAT 266

Query: 89  FNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSME 148
           +NV++D LCK G+  E   + + MV  +++P+  TY  L+ G C +G ++ A  ++  + 
Sbjct: 267 YNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEII 326

Query: 149 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 208
             G   D   YN L+ G+C+   V+EA   +      G++  + TYN +  GLF+   V+
Sbjct: 327 KTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVD 385

Query: 209 HALKLFEEMQRDDVA-ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
            A++L++ +++D     DT T+ T I GLC+NG+  +A  +F    +   +LD+ +Y+ +
Sbjct: 386 EAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSM 445

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           I+GLC  GRL  A++++  + +     +   YN +I G C   +   A  ++  M +N  
Sbjct: 446 INGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGC 505

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +P VI + TLI G  +  K  +   +  +M E    PD
Sbjct: 506 SPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPD 543



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 180/331 (54%), Gaps = 2/331 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALF-LQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           N  TYN +I GL   G VD+A  L+ L  K     PD VT+ +LIHGLC     N+A  +
Sbjct: 367 NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTI 426

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E    G Q  V +++ +++ LC  G++ +A ++ + M +   +PN+  Y+ L+ GFC 
Sbjct: 427 FEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQ 486

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             + + A  ++  M   GC    ++YN LI+G CK ++ +EA S+ REMV  G  P + T
Sbjct: 487 VYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITT 546

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +L  GLF   +++ AL +++++    +  D   +N  I GLC  G + EA+ +F  + 
Sbjct: 547 YGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMK 606

Query: 254 ILK-CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             K C  ++  YN L+DGL ++G ++ A  L+ S+    L  D+++YN  I GLC+  ++
Sbjct: 607 EKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRI 666

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            +   L  ++    + P VI +  L+   ++
Sbjct: 667 HEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 201/389 (51%), Gaps = 38/389 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TY+T++ GL K+  +D A  L  +M    + PDVV YN+L+ G   A ++ +  R+
Sbjct: 191 PDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRV 250

Query: 74  FFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           + +++ D G +P++ T+NV++D LCK G+  E   + + MV  +++P+  TY  L+ G C
Sbjct: 251 WDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLC 310

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G ++ A  ++  +   G   D   YN L+ G+C+   V+EA   +      G++  + 
Sbjct: 311 RSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLR 369

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVA-ADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           TYN +  GLF+   V+ A++L++ +++D     DT T+ T I GLC+NG+  +A  +F  
Sbjct: 370 TYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEE 429

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR---------------------- 289
             +   +LD+ +Y+ +I+GLC  GRL  A++++  + +                      
Sbjct: 430 ARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYR 489

Query: 290 -----RVL--VAD------VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
                R+   +AD      V+TYN +I GLC   +  +A  +  +M EN   P++  + +
Sbjct: 490 TSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGS 549

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LI G     K    + +  ++  K +  D
Sbjct: 550 LIRGLFSDKKIDDALSIWKQILYKGLKVD 578



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 169/307 (55%), Gaps = 1/307 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E  V C P+TVT+ T+I GLC+ GF +KA  +F + +      DV +Y+S+I+GLC+   
Sbjct: 395 EKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGR 454

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A +++ +M   G +P+   +N ++   C+  +  +A R+   M      P   TY+T
Sbjct: 455 LVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNT 514

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+DG C   K   A  +   M   G   D  +Y  LI G   +K++++ALS++++++ KG
Sbjct: 515 LIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKG 574

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           +K  V+ +N L  GL    +V+ AL +F +M ++ +   +  TYNT +DGL + GYI +A
Sbjct: 575 LKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKA 634

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             L+ ++     E DI +YN  I GLC   R+   ++L   +  R ++  V+T+NI++  
Sbjct: 635 ATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRA 694

Query: 306 LCNDGQM 312
           +   G +
Sbjct: 695 VIKYGPI 701



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 131/274 (47%), Gaps = 8/274 (2%)

Query: 108 LLDLMVQRDVRPNAFTYSTL--MDGFCLTGKINRAEELFGSMES-MGCKHDDVSYNILIN 164
           LL+L+ +   RP     + L  +  F      + A + F ++ S +GC     S+N L++
Sbjct: 68  LLNLLPRLRHRPRFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLD 127

Query: 165 GYCKNKEVEEA----LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            + + +   +A     SL      + I P + TYN +   L     ++ A+ LF+ ++R 
Sbjct: 128 AFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRR 187

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            VA D  TY+T + GL K   +  A++L   +     + D+  YN L+ G  K+G  E  
Sbjct: 188 QVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKV 247

Query: 281 LELFRSLPRRVLV-ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           + ++  L +      ++ TYN+M+ GLC  G+  +  +++  M  N + P+VI +  LIH
Sbjct: 248 MRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIH 307

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           G  R         +  ++ +  ++ DA++ + +V
Sbjct: 308 GLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLV 341


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/371 (33%), Positives = 190/371 (51%), Gaps = 10/371 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN---PDVVTYNSLIHGLCHANDWNE 69
           +P+ VT NT++DGLCK G V +A A F++ +  +++   P+ VTYN LI   C   + + 
Sbjct: 206 RPDVVTLNTVVDGLCKSGRVQEALA-FVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISM 264

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP----NAFTYS 125
           A  L  +M ++GV  ++VT N I+  LC+ G+   A  L     +R V P    NA TYS
Sbjct: 265 AYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAA--LEFFREKRTVWPEGKGNAVTYS 322

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+     T  +  A ELF    S G   D + Y  +I+G  +   +E+A S+   M   
Sbjct: 323 TLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEA 382

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G K     YN L  G     ++  A +L +EM+   +  D  TYNT + G CK G     
Sbjct: 383 GFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAV 442

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            EL   +    C+  +  +  L+ G CK G+++ AL + RS+    +  + V YN +I  
Sbjct: 443 DELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDF 502

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC  G +D A +LF +M+E +V  NV  F  L+ G    N P K  EL+ +M+E++  PD
Sbjct: 503 LCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPD 562

Query: 366 ASIVSMVVDLL 376
              V ++++ L
Sbjct: 563 YVTVDVLMEWL 573



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 188/369 (50%), Gaps = 13/369 (3%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKG-ENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
            +N+I+  L +   V     ++  M+G  ++ PDVVTY  L++GLC A    +A R+   
Sbjct: 138 AFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDG 197

Query: 77  MMDQ--GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR-----DVRPNAFTYSTLMD 129
           M  Q   ++P VVT N ++D LCK+G++ EA   L  + QR        PN  TY+ L+D
Sbjct: 198 MSRQDLDIRPDVVTLNTVVDGLCKSGRVQEA---LAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE--MVSKGI 187
            FC  G I+ A EL   ME+ G   + V+ N ++ G C+      AL  +RE   V    
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           K   VTY+TL   L   + V  A++LF E   +  + D   Y T I GL + G + +A  
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACS 374

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +  ++     +LD +AYN LI G C+  RL  A EL + +    +  DV TYN ++ G C
Sbjct: 375 MASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSC 434

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G      +L   M ++   P+VI F TL+HG+ ++ K  + + +L  M E  + P+  
Sbjct: 435 KAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNV 494

Query: 368 IVSMVVDLL 376
           I + ++D L
Sbjct: 495 IYNTLIDFL 503



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 172/349 (49%), Gaps = 6/349 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNTVTYN +ID  C+ G +  A  L  +M+ E +  ++VT N+++ GLC A     A 
Sbjct: 242 CPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAAL 301

Query: 72  RLFFEMMDQGVQP----SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             F E   + V P    + VT++ ++  L     +  A  L    +     P+A  Y T+
Sbjct: 302 EFFRE--KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTM 359

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G    G++  A  +  SM+  G K D  +YNILI G+C+ K + EA  L +EM   GI
Sbjct: 360 ISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGI 419

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P V TYNTL  G  +        +L  +M  D       T+ T + G CK G I EA+ 
Sbjct: 420 RPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALR 479

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           + R++       +   YN LID LCK G +++A+ELF  +  + + A+V T+N ++ GL 
Sbjct: 480 ILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLR 539

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           +    +KA +L   M E    P+ +    L+     I +  ++   + +
Sbjct: 540 DKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQ 588



 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 121/243 (49%), Gaps = 6/243 (2%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           MA+   E G   K +T  YN +I G C++  + +A  L  +MK   I PDV TYN+L+ G
Sbjct: 375 MASSMKEAGF--KLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSG 432

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
            C A D+     L  +M+D G QPSV+TF  ++   CK GK+DEA R+L  M +  + PN
Sbjct: 433 SCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPN 492

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
              Y+TL+D  C  G ++ A ELF  M+      +  ++N L+ G       E+A  L  
Sbjct: 493 NVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMD 552

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE----MQRDDVAADTSTYNTFIDGL 236
           +M  +   P  VT + L   L  I + +   +  ++      +  V+  TS Y  F  GL
Sbjct: 553 QMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHTASKRIVSDRTSAYFHFATGL 612

Query: 237 CKN 239
            + 
Sbjct: 613 AET 615


>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
 gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
          Length = 347

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 169/308 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +TYN +++G+C+EG VD A      +      P+ V+YN ++ GL  A  W +A+
Sbjct: 12  CAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAE 71

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  EM  +G  P+VVTFN+++  LC+ G ++ A  +L+ + +    PN+ +Y+ L+  F
Sbjct: 72  KLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAF 131

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K+++A      M S GC  D VSYN L+   C+N EV+ A+ L  ++  KG  P +
Sbjct: 132 CKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVL 191

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++YNT+  GL +  + + AL+L +EM    +  D  TY T   GLC+   I EA+  F  
Sbjct: 192 ISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCK 251

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +     +  YN ++ GLCK      A++LF  +     + +  TY I++ GL  +G 
Sbjct: 252 VQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGL 311

Query: 312 MDKAHDLF 319
           + +A DL 
Sbjct: 312 VKEARDLL 319



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 158/305 (51%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           L  +M+ +   PD++TYN +++G+C     ++A      +   G +P+ V++N+++  L 
Sbjct: 3   LLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLF 62

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
              + ++A +L++ M  +   PN  T++ L+   C  G +  A E+   +   GC  + +
Sbjct: 63  TAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSL 122

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           SYN L++ +CK K++++A++    MVS+G  P +V+YNTL   L    +V+ A+ L  ++
Sbjct: 123 SYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQL 182

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
           +    +    +YNT IDGL K G   EA+EL   +     + DI  Y  +  GLC+  ++
Sbjct: 183 KGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKI 242

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           E A+  F  +    +   VV YN ++ GLC   +   A DLF  M  N   PN   +  L
Sbjct: 243 EEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTIL 302

Query: 338 IHGFV 342
           + G  
Sbjct: 303 VEGLA 307



 Score =  164 bits (414), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 161/305 (52%)

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  EM D+G  P ++T+NV+++ +C+ G++D+A   L+ +      PN  +Y+ ++ G 
Sbjct: 2   KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +   AE+L   M   GC  + V++N+LI+  C+   VE A+ +  ++   G  P  
Sbjct: 62  FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++YN L     +  +++ A+   E M       D  +YNT +  LC+NG +  A++L   
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQ 181

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L    C   + +YN +IDGL K+G+ + ALEL   +  + L  D++TY  +  GLC + +
Sbjct: 182 LKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDK 241

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A   F  +++  + P V+++  ++ G  +  +    I+L   M     MP+ S  ++
Sbjct: 242 IEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTI 301

Query: 372 VVDLL 376
           +V+ L
Sbjct: 302 LVEGL 306



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 130/241 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VT+N +I  LC+ G V+ A  +  Q+      P+ ++YN L+H  C     ++A 
Sbjct: 82  CPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAM 141

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                M+ +G  P +V++N ++  LC+NG++D A  LL  +  +   P   +Y+T++DG 
Sbjct: 142 AFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGL 201

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GK   A EL   M S G + D ++Y  + +G C+  ++EEA+  + ++   GI+PTV
Sbjct: 202 TKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTV 261

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YN + LGL +  +  +A+ LF  M  +    + STY   ++GL   G + EA +L   
Sbjct: 262 VLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQ 321

Query: 252 L 252
           L
Sbjct: 322 L 322



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 100/176 (56%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V+YNT++  LC+ G VD A  L  Q+KG+  +P +++YN++I GL  A    EA 
Sbjct: 152 CYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEAL 211

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+ +G+QP ++T+  I   LC+  K++EA R    +    +RP    Y+ ++ G 
Sbjct: 212 ELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGL 271

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           C   + + A +LF  M S GC  ++ +Y IL+ G      V+EA  L  ++ S+G+
Sbjct: 272 CKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSRGV 327



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 78/143 (54%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C P  ++YNT+IDGL K G   +A  L  +M  + + PD++TY ++  GLC  +   
Sbjct: 184 GKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIE 243

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA R F ++ D G++P+VV +N I+  LCK  +   A  L   M+     PN  TY+ L+
Sbjct: 244 EAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILV 303

Query: 129 DGFCLTGKINRAEELFGSMESMG 151
           +G    G +  A +L G + S G
Sbjct: 304 EGLAYEGLVKEARDLLGQLCSRG 326



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 35/225 (15%)

Query: 176 LSLYREMVSKGIKPTVVTYNTL---------------FL--------------------G 200
           + L  EM  KG  P ++TYN +               FL                    G
Sbjct: 1   MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
           LF   + E A KL EEM       +  T+N  I  LC+ G +  A+E+   +    C  +
Sbjct: 61  LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPN 120

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
             +YN L+   CK  +++ A+     +  R    D+V+YN ++  LC +G++D A DL  
Sbjct: 121 SLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLH 180

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            ++    +P +I + T+I G  +  K  + +ELL +M  K + PD
Sbjct: 181 QLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPD 225


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/359 (32%), Positives = 185/359 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y T+IDG CK G +++ K LF +M   ++  +  TY  LI+G        +   L
Sbjct: 184 PNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIEL 243

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +M   G+ P+V T+N ++   C +GK++ A  L D M +R V  N  TY+TL+ G C 
Sbjct: 244 YEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQ 303

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++  AE L   M+  G   + +SYN LI+GYC    +++A SL+ +M S G  P++ T
Sbjct: 304 ERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLAT 363

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  E         +  EM+   ++    TY   +D L ++  I +A +++ ++ 
Sbjct: 364 YNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSME 423

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 DI  Y  LI GLC  G ++ A +LF+SL    L  + V YN MI+G C +G   
Sbjct: 424 KAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSY 483

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +A  L  +M EN + PNV  + + I    +  K ++   LL  M E  + P  SI +M+
Sbjct: 484 RALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 542



 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 189/364 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +  ++  +I G C+ G++DK   +  QM+   ++P+VV Y +LI G C   D    K+
Sbjct: 148 KLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQ 207

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF++M +  V  +  T+ V+++   K G   +   L + M    + PN +TY++++   C
Sbjct: 208 LFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCC 267

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+N A ELF  M   G   + V+YN LI G C+ + V EA  L   M   G+ P ++
Sbjct: 268 NDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLI 327

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNTL  G   I  ++ A  LF +M+    +   +TYN  I G  +        ++ R +
Sbjct: 328 SYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREM 387

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                      Y  L+D L +S  +E A +++ S+ +  LVAD+  Y ++IHGLC  G M
Sbjct: 388 EARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDM 447

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  LF  ++E  + PN +I+ T+I+G+ +     + + LL +M E  ++P+ +  +  
Sbjct: 448 KEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNST 507

Query: 373 VDLL 376
           + +L
Sbjct: 508 IXIL 511



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 178/359 (49%), Gaps = 1/359 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + + +  II+   +    ++A     QM G  + P   T+N+L+  L  +N + +A R+F
Sbjct: 81  HVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVF 140

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            E     V+  V +F +++   C+ G +D+   +L  M +  + PN   Y+TL+DG C  
Sbjct: 141 NETKGN-VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKN 199

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G I R ++LF  M  +    +  +Y +LING+ K    ++ + LY +M   GI P V TY
Sbjct: 200 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 259

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N++        ++ +A +LF+EM+   VA +  TYNT I GLC+   ++EA  L   +  
Sbjct: 260 NSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 319

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                ++ +YN LIDG C  G L+ A  LF  +        + TYNI+I G         
Sbjct: 320 DGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAG 379

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
             D+  +ME   ++P+ + +  L+   VR +   K  ++   M++  ++ D  I  +++
Sbjct: 380 VTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLI 438



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 163/316 (51%), Gaps = 3/316 (0%)

Query: 63  HANDWNEAKRLFF--EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           H       + LF+  +M+ +G+ P   TFN ++  L K+   ++A R+ +   + +V+ +
Sbjct: 92  HVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN-ETKGNVKLD 150

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
            +++  ++ G C  G +++  E+ G ME MG   + V Y  LI+G CKN ++E    L+ 
Sbjct: 151 VYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFY 210

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           +M    +     TY  L  G F++   +  ++L+E+M+   +  +  TYN+ I   C +G
Sbjct: 211 KMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDG 270

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            +  A ELF  +       ++  YN LI GLC+  R+  A  L   + R  L  ++++YN
Sbjct: 271 KLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYN 330

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +I G C+ G +DKA  LF  M+ +  +P++  +  LI GF      + V +++ +M+ +
Sbjct: 331 TLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEAR 390

Query: 361 KVMPDASIVSMVVDLL 376
            + P     ++++D L
Sbjct: 391 GLSPSKVTYTILMDAL 406



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 109/225 (48%), Gaps = 35/225 (15%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN ++YNT+IDG C  G +DKA +LF QMK    +P + TYN LI G   A +      +
Sbjct: 324 PNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDM 383

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G+ PS VT+ ++MD L ++  +++A ++   M +  +  + + Y  L+ G C+
Sbjct: 384 VREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCV 443

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM----------- 182
            G +  A +LF S++ M  K +DV YN +I GYCK      AL L +EM           
Sbjct: 444 VGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVAS 503

Query: 183 ------------------------VSKGIKPTVVTYNTLFLGLFE 203
                                   +  G+KP++  +N +    F+
Sbjct: 504 YNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFD 548



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 49/80 (61%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V YNT+I G CKEG   +A  L  +M    + P+V +YNS I  LC    W EA+ 
Sbjct: 463 KPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEV 522

Query: 73  LFFEMMDQGVQPSVVTFNVI 92
           L  +M++ G++PS+  +N+I
Sbjct: 523 LLKDMIELGLKPSISIWNMI 542


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/371 (33%), Positives = 190/371 (51%), Gaps = 10/371 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN---PDVVTYNSLIHGLCHANDWNE 69
           +P+ VT NT++DGLCK G V +A A F++ +  +++   P+ VTYN LI   C   + + 
Sbjct: 206 RPDVVTLNTVVDGLCKSGRVQEALA-FVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISM 264

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP----NAFTYS 125
           A  L  +M ++GV  ++VT N I+  LC+ G+   A  L     +R V P    NA TYS
Sbjct: 265 AYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAA--LEFFREKRTVWPEGKGNAVTYS 322

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+     T  +  A ELF    S G   D + Y  +I+G  +   +E+A S+   M   
Sbjct: 323 TLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEA 382

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G K     YN L  G     ++  A +L +EM+   +  D  TYNT + G CK G     
Sbjct: 383 GFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAV 442

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            EL   +    C+  +  +  L+ G CK G+++ AL + RS+    +  + V YN +I  
Sbjct: 443 DELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDF 502

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC  G +D A +LF +M+E +V  NV  F  L+ G    N P K  EL+ +M+E++  PD
Sbjct: 503 LCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPD 562

Query: 366 ASIVSMVVDLL 376
              V ++++ L
Sbjct: 563 YVTVDVLMEWL 573



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 188/369 (50%), Gaps = 13/369 (3%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKG-ENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
            +N+I+  L +   V     ++  M+G  ++ PDVVTY  L++GLC A    +A R+   
Sbjct: 138 AFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDG 197

Query: 77  MMDQ--GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR-----DVRPNAFTYSTLMD 129
           M  Q   ++P VVT N ++D LCK+G++ EA   L  + QR        PN  TY+ L+D
Sbjct: 198 MSRQDLDIRPDVVTLNTVVDGLCKSGRVQEA---LAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE--MVSKGI 187
            FC  G I+ A EL   ME+ G   + V+ N ++ G C+      AL  +RE   V    
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           K   VTY+TL   L   + V  A++LF E   +  + D   Y T I GL + G + +A  
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACS 374

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +  ++     +LD +AYN LI G C+  RL  A EL + +    +  DV TYN ++ G C
Sbjct: 375 MASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSC 434

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G      +L   M ++   P+VI F TL+HG+ ++ K  + + +L  M E  + P+  
Sbjct: 435 KAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNV 494

Query: 368 IVSMVVDLL 376
           I + ++D L
Sbjct: 495 IYNTLIDFL 503



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 172/349 (49%), Gaps = 6/349 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNTVTYN +ID  C+ G +  A  L  +M+ E +  ++VT N+++ GLC A     A 
Sbjct: 242 CPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAAL 301

Query: 72  RLFFEMMDQGVQP----SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             F E   + V P    + VT++ ++  L     +  A  L    +     P+A  Y T+
Sbjct: 302 EFFRE--KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTM 359

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G    G++  A  +  SM+  G K D  +YNILI G+C+ K + EA  L +EM   GI
Sbjct: 360 ISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGI 419

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P V TYNTL  G  +        +L  +M  D       T+ T + G CK G I EA+ 
Sbjct: 420 RPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALR 479

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           + R++       +   YN LID LCK G +++A+ELF  +  + + A+V T+N ++ GL 
Sbjct: 480 ILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLR 539

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           +    +KA +L   M E    P+ +    L+     I +  ++   + +
Sbjct: 540 DKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQ 588



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 111/216 (51%), Gaps = 2/216 (0%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           MA+   E G   K +T  YN +I G C++  + +A  L  +MK   I PDV TYN+L+ G
Sbjct: 375 MASSMKEAGF--KLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSG 432

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
            C A D+     L  +M+D G QPSV+TF  ++   CK GK+DEA R+L  M +  + PN
Sbjct: 433 SCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPN 492

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
              Y+TL+D  C  G ++ A ELF  M+      +  ++N L+ G       E+A  L  
Sbjct: 493 NVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMD 552

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           +M  +   P  VT + L   L  I + +   +  ++
Sbjct: 553 QMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQ 588



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 72/143 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ +T+ T++ G CK G +D+A  +   M    I+P+ V YN+LI  LC   D + A 
Sbjct: 454 CQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAI 513

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM ++ V  +V TFN ++  L      ++A  L+D M +    P+  T   LM+  
Sbjct: 514 ELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWL 573

Query: 132 CLTGKINRAEELFGSMESMGCKH 154
            + G+ +R +      E    K 
Sbjct: 574 PVIGETDRLKRFMQQGEHTASKR 596


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 194/396 (48%), Gaps = 35/396 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +YN +I G  K   +D A  +F +M+    +PDVVTYN +I  LC       A  +
Sbjct: 129 PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEV 188

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             E++  G +PSV+T+ ++++     G+++EA  L D +V R +RP+ +TY+ ++ G C 
Sbjct: 189 MDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICK 248

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  +RA +    + + GC  D VSYNIL+  +      E+   L ++MV  G +P VVT
Sbjct: 249 EGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVT 308

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           ++ L        +V  A+ + E M+   +  D+ +Y+  I   CK G +  A+E    + 
Sbjct: 309 HSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMV 368

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP------------------------- 288
              C  DI  YN ++  LCK G  ++AL++F  L                          
Sbjct: 369 SDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKI 428

Query: 289 ----------RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
                     R+ +  D +TYN +I  LC DG +D+A  L +DME     P VI F  ++
Sbjct: 429 KALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVL 488

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            G  + ++  + IELL  M EK  +P+ +   ++++
Sbjct: 489 LGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIE 524



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 171/306 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TYN II G+CKEG  D+A      +     NPDVV+YN L+    + + W + +R
Sbjct: 233 RPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGER 292

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+  G +P+VVT ++++   C+ G++ EA  +L++M ++ + P++++Y  L+  FC
Sbjct: 293 LMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFC 352

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ A E    M S GC  D V+YN ++   CK    + AL ++ ++   G  PTV 
Sbjct: 353 KEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVR 412

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YNT+F  L+       AL++  EM R  +  D  TYN+ I  LC++G + EA+ L   +
Sbjct: 413 AYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDM 472

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + +  + ++N ++ G+CK+ R+   +EL  ++  +  + +  +Y ++I G+   G  
Sbjct: 473 EATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWR 532

Query: 313 DKAHDL 318
            +A +L
Sbjct: 533 AEAMEL 538



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 176/355 (49%), Gaps = 5/355 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALF--LQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           KP+ V    +I G      + KA  +   L+  G+   PDV +YN++I G   AN  + A
Sbjct: 94  KPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGD---PDVYSYNAMISGFSKANQIDSA 150

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            ++F  M  +G  P VVT+N+++  LC  GK++ A  ++D +++   +P+  TY+ L++ 
Sbjct: 151 NQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEA 210

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
             L G+IN A ELF  + S G + D  +YN +I G CK    + AL   R + ++G  P 
Sbjct: 211 TILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPD 270

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VV+YN L        + E   +L ++M       +  T++  I   C+ G + EAV +  
Sbjct: 271 VVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLE 330

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +       D  +Y+ LI   CK GRL++A+E    +     + D+V YN ++  LC  G
Sbjct: 331 VMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFG 390

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             D A D+F  ++E    P V  + T+           K +E++ +M  K + PD
Sbjct: 391 CADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPD 445



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 169/346 (48%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+ +TY  +I+    EG +++A  LF ++    + PD+ TYN++I G+C     + A 
Sbjct: 197 CKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRAL 256

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                +  +G  P VV++N+++       + ++  RL+  MV     PN  T+S L+  F
Sbjct: 257 DFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSF 316

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++  A  +   M+  G   D  SY+ LI+ +CK   ++ A+    +MVS G  P +
Sbjct: 317 CREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDI 376

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YNT+   L +    + AL +FE++           YNT    L   G  ++A+E+   
Sbjct: 377 VNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISE 436

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D   YN LI  LC+ G ++ A+ L   +        V+++NI++ G+C   +
Sbjct: 437 MIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHR 496

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           + +  +L + M E    PN   +V LI G       ++ +EL + +
Sbjct: 497 VFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSL 542



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 159/331 (48%), Gaps = 1/331 (0%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
           + A F Q    N++        L++  C A   NE+      ++ +G +P VV    ++ 
Sbjct: 46  SSAEFRQPHFPNLDNRDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIK 105

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
               +  + +A R+++++ +    P+ ++Y+ ++ GF    +I+ A ++F  M S G   
Sbjct: 106 GFFNSRNLKKAMRVMEIL-ETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSP 164

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D V+YNI+I   C   ++E A  +  E++  G KP+V+TY  L        ++  AL+LF
Sbjct: 165 DVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELF 224

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           +E+    +  D  TYN  I G+CK G    A++  R L    C  D+ +YN L+      
Sbjct: 225 DELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNK 284

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            R E    L + +       +VVT++I+I   C +G++ +A ++   M+E  + P+   +
Sbjct: 285 SRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSY 344

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             LI  F +  +    IE L KM     +PD
Sbjct: 345 DPLISAFCKEGRLDLAIEYLEKMVSDGCLPD 375



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 106/215 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P++ +Y+ +I   CKEG +D A     +M  +   PD+V YN+++  LC     + A  +
Sbjct: 339 PDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDV 398

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F ++ + G  P+V  +N +   L   G   +A  ++  M+++ + P+  TY++L+   C 
Sbjct: 399 FEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCR 458

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A  L   ME+   +   +S+NI++ G CK   V E + L   MV KG  P   +
Sbjct: 459 DGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETS 518

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
           Y  L  G+        A++L   + R  V +  S+
Sbjct: 519 YVLLIEGIAYAGWRAEAMELANSLYRLGVISGDSS 553



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 4/179 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V YNTI+  LCK G  D A  +F ++      P V  YN++   L    +  +A 
Sbjct: 372 CLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKAL 431

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  EM+ +G+ P  +T+N ++  LC++G +DEA  LL  M     +P   +++ ++ G 
Sbjct: 432 EMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGM 491

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC----KNKEVEEALSLYREMVSKG 186
           C   ++    EL  +M   GC  ++ SY +LI G      + + +E A SLYR  V  G
Sbjct: 492 CKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVISG 550



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 2/152 (1%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+G  C P    YNT+   L   G   KA  +  +M  + I+PD +TYNSLI  LC    
Sbjct: 404 EVG--CPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGL 461

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            +EA  L  +M     QP+V++FN+++  +CK  ++ E   LL  MV++   PN  +Y  
Sbjct: 462 VDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVL 521

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           L++G    G    A EL  S+  +G    D S
Sbjct: 522 LIEGIAYAGWRAEAMELANSLYRLGVISGDSS 553


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 191/399 (47%), Gaps = 31/399 (7%)

Query: 3   NGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC 62
            G  E G    P+ V++N ++ G CK G VD AK+ F  M    + PDV +YN L+HGLC
Sbjct: 261 TGGEEFG----PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLC 316

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
            A    EA     +M + GV+P +VT+N++ +     G +  A +++  M+   + P+  
Sbjct: 317 VAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLV 376

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE----------- 171
           TY+ L+ G C  G I  + +L   M S G K   V+Y +L++  CK+             
Sbjct: 377 TYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEM 436

Query: 172 ----------------VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
                           VEEA+ LY EM SK I P     + +  GLFE   +  A   F+
Sbjct: 437 EVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFD 496

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
            + + DVA +   YN  IDG  K G I EAV  ++ +        I  +N LI G CK G
Sbjct: 497 SVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKG 556

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           +L  A++L  ++    LV   VTY  +++G C +G M    D+  +ME  A+ P  I + 
Sbjct: 557 KLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYT 616

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            ++ G  +  +  + ++LL  M  + + PD    + V+ 
Sbjct: 617 VVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQ 655



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 182/351 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN+   + II GL ++G + +A+  F  +   ++  +++ YN +I G     +  EA R 
Sbjct: 470 PNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRS 529

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +++++G+ P++VTFN ++   CK GK+ EA +LLD +    + P + TY+TLM+G+C 
Sbjct: 530 YKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCE 589

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++   ++   ME+   K   ++Y +++ G CK   + E++ L + M ++G+ P  +T
Sbjct: 590 EGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQIT 649

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+     + H ++ A +L  +M +  +     TYN  I+GLC  G + +A  L  TL 
Sbjct: 650 YNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQ 709

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                L   AY  +I   C  G ++ AL  F  +  R     +  Y+ +I+ LC    + 
Sbjct: 710 DQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLIT 769

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            A   F  M  + + P+  I + +++ F R   P+ V E+   M +  ++P
Sbjct: 770 DAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 183/356 (51%), Gaps = 27/356 (7%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTYN + +G    G +  A  +  +M    +NPD+VTY  LI G C   +  E+ +
Sbjct: 337 EPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFK 396

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL----------DL----------- 111
           L  +M+ QG++ S+VT+ V++  LCK+G++DEA  LL          DL           
Sbjct: 397 LKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEA 456

Query: 112 ------MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILING 165
                 M  + + PN+F  S ++ G    G I+ A+  F S+       + + YNI+I+G
Sbjct: 457 IELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDG 516

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
           Y K   + EA+  Y++++ KGI PT+VT+N+L  G  +  ++  A+KL + ++   +   
Sbjct: 517 YAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPT 576

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
           + TY T ++G C+ G +    ++   +     +     Y  ++ GLCK GRL  +++L +
Sbjct: 577 SVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLK 636

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            +  R L  D +TYN +I   C    + KA  L   M ++++ P+ + +  LI+G 
Sbjct: 637 YMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGL 692



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 192/386 (49%), Gaps = 27/386 (6%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T   +IDGLC++  +  A     +  GE   P VV++N+L+ G C     + AK  F
Sbjct: 234 NEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFF 293

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M+  G+ P V ++N+++  LC  G M+EA    + M    V P+  TY+ L +GF + 
Sbjct: 294 CMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRIL 353

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G I+ A ++   M   G   D V+Y ILI G+C+   +EE+  L  +M+S+G+K ++VTY
Sbjct: 354 GLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTY 413

Query: 195 NTLFLGLFE----------IHQ-----------------VEHALKLFEEMQRDDVAADTS 227
             L   L +          +H+                 VE A++L+EEM    +  ++ 
Sbjct: 414 TVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSF 473

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
             +  I GL + G I EA   F ++       +I  YN +IDG  K G +  A+  ++ +
Sbjct: 474 VCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQI 533

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
             + +   +VT+N +I+G C  G++ +A  L   ++ + + P  + + TL++G+      
Sbjct: 534 IEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDM 593

Query: 348 SKVIELLHKMKEKKVMPDASIVSMVV 373
             + ++LH+M+ K + P     ++VV
Sbjct: 594 HSMFDMLHEMEAKAIKPTQITYTVVV 619



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 179/379 (47%), Gaps = 30/379 (7%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +  TYN+++  L      D    ++ ++K   +  +  T   LI GLC  +   +A    
Sbjct: 202 SIATYNSLLYNL---RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFL 258

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            E   +   PSVV+FN +M   CK G +D A     +M++  + P+ ++Y+ L+ G C+ 
Sbjct: 259 RETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVA 318

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +  A E    ME+ G + D V+YNIL NG+     +  A  + + M+  G+ P +VTY
Sbjct: 319 GSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTY 378

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  G  ++  +E + KL E+M    +     TY   +  LCK+G I EAV L   + +
Sbjct: 379 TILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEV 438

Query: 255 LKCELDIQAY---------------------------NCLIDGLCKSGRLEIALELFRSL 287
           +  + D+  Y                           + +I GL + G +  A   F S+
Sbjct: 439 IGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSV 498

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
            +  +  +++ YNIMI G    G + +A   +  + E  ++P ++ F +LI+GF +  K 
Sbjct: 499 TKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKL 558

Query: 348 SKVIELLHKMKEKKVMPDA 366
           ++ ++LL  +K   ++P +
Sbjct: 559 AEAVKLLDTIKVHGLVPTS 577



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 94/177 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  +TY  ++ GLCKEG + ++  L   M    + PD +TYN++I   C A+D  +A +
Sbjct: 609 KPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQ 668

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+   +QPS VT+NV+++ LC  G + +A RLL  +  + +R     Y+T++   C
Sbjct: 669 LHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHC 728

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             G +  A   F  M   G +     Y+ +IN  CK   + +A   +  M++ GI P
Sbjct: 729 AKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPP 785



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 156/311 (50%), Gaps = 24/311 (7%)

Query: 66  DWNEAKRLFFEMM--DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
           D +++    F+++  + G + S V++ ++   + + G+  E  R+L+ MV+ +   +A +
Sbjct: 93  DNSDSALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPS 152

Query: 124 YSTLM-DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
              L+ + F       R  +L           ++V +++L   Y + + V +AL +  +M
Sbjct: 153 LCELLCNSF-------RDWDL-----------NNVVWDMLACAYSRAEMVHDALFVLAKM 194

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
               ++ ++ TYN+L   L+ +   +    ++ E++   V  +  T    IDGLC+   +
Sbjct: 195 KVLNLQVSIATYNSL---LYNLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRL 251

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            +AV   R  G  +    + ++N L+ G CK G +++A   F  + +  L+ DV +YNI+
Sbjct: 252 QDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNIL 311

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           +HGLC  G M++A +   DME + V P+++ +  L +GF  +   S   +++ +M    +
Sbjct: 312 LHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGL 371

Query: 363 MPDASIVSMVV 373
            PD    ++++
Sbjct: 372 NPDLVTYTILI 382



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 163/352 (46%), Gaps = 22/352 (6%)

Query: 33  DKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQ---GVQPSVVT 88
           D A  LF  ++ E       V++  + H +       E +R+  +M+++   G  PS+  
Sbjct: 96  DSALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCE 155

Query: 89  F-----------NVIMDEL-CKNGKMD---EASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
                       NV+ D L C   + +   +A  +L  M   +++ +  TY++L+     
Sbjct: 156 LLCNSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRH 215

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           T   +   +++  +++ G   ++ +  ILI+G C+   +++A++  RE   +   P+VV+
Sbjct: 216 T---DIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVS 272

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L  G  ++  V+ A   F  M +  +  D  +YN  + GLC  G + EA+E    + 
Sbjct: 273 FNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDME 332

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E DI  YN L +G    G +  A ++ + +    L  D+VTY I+I G C  G ++
Sbjct: 333 NHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIE 392

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++  L   M    +  +++ +  L+    +  +  + + LLH+M+   + PD
Sbjct: 393 ESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPD 444



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 70/139 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTYN +I+GLC  G +  A  L + ++ ++I    V Y ++I   C   D   A  
Sbjct: 679 QPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALV 738

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F +M+++G + S+  ++ +++ LCK   + +A     +M+   + P+      +++ F 
Sbjct: 739 FFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFH 798

Query: 133 LTGKINRAEELFGSMESMG 151
            +G  N   E+F  M   G
Sbjct: 799 RSGDPNSVFEIFAMMIKCG 817


>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Brachypodium distachyon]
          Length = 597

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 178/356 (50%), Gaps = 6/356 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKG--ENINPDVVTYNSLIHGLCHANDWNEA 70
           +PN VTY  ++ GLCK G V  A ++   M G   ++ PDVV  N+++ GLC      +A
Sbjct: 169 RPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQA 228

Query: 71  KRLFFEMMD--QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            +   E M    G  P+ VT+N +    C+ G +  A  L+  M +  V PNA T +T++
Sbjct: 229 VKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIV 288

Query: 129 DGFCLTGKINRAEELFGSMESMG--CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
            G C  G++  A E F    ++    + + V+Y+ L+  +     V  A+ L+ EMV +G
Sbjct: 289 GGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEG 348

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
             P  + Y T+  GL +  +++ A  +   M++     D   YN  I G C+   + EA 
Sbjct: 349 NSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAY 408

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           EL   +     + D+  YN L+ GLCK+G      EL   +        VVT+  +IHG 
Sbjct: 409 ELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGY 468

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           C  GQ+D+A  +F  M+E+ + PN +I+ TLI    +    S  IEL  +M+EK V
Sbjct: 469 CKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHV 524



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 181/370 (48%), Gaps = 6/370 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+T  +NT++D L + G +     LF  M+  ++ P+VVTY  L+ GLC A    +A  
Sbjct: 134 PPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALS 193

Query: 73  LFFEMM--DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ--RDVRPNAFTYSTLM 128
           +   M   +  V P VV  N I+D LCK G++ +A + ++  ++      PN  TY+ L 
Sbjct: 194 VLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLA 253

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE--MVSKG 186
             FC  G +  A EL   ME      + V+ N ++ G C    V  AL  +RE   V   
Sbjct: 254 HAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPE 313

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            +   VTY+TL       + V  A++LF EM  +  + D   Y T I GL + G + +A 
Sbjct: 314 ARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAW 373

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            +  ++     +LD +AYN LI G C+  RL  A EL   +    L  DV TYN ++ GL
Sbjct: 374 SMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGL 433

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C  G      +L   M +    P+V+ F TLIHG+ ++ +  + + +   M E  + P+ 
Sbjct: 434 CKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNT 493

Query: 367 SIVSMVVDLL 376
            I + ++D L
Sbjct: 494 VIYNTLIDFL 503



 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/371 (32%), Positives = 179/371 (48%), Gaps = 7/371 (1%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN---PDVVTYNSLIHGLCHANDW 67
           VC P+ V  N I+DGLCK G + +A   F++ +  +++   P+ VTYN L H  C A + 
Sbjct: 205 VC-PDVVMLNNIVDGLCKTGRLQQA-VKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNV 262

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL--DLMVQRDVRPNAFTYS 125
             A  L  +M  + V P+ VT N I+  LC  G++  A         V  + R NA TYS
Sbjct: 263 GMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYS 322

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+  F  T  +  A ELF  M   G   D + Y  +I+G  +   +++A S+   M   
Sbjct: 323 TLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKA 382

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G +     YN L  G     ++  A +L  EM+   +  D  TYNT + GLCK G  +  
Sbjct: 383 GFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAV 442

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            EL   +    C   +  +  LI G CK G+++ AL +FRS+    +  + V YN +I  
Sbjct: 443 DELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDF 502

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC       A +LF +M E  V  NV  F  L+ G    N P K  EL+  M+E +  PD
Sbjct: 503 LCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPD 562

Query: 366 ASIVSMVVDLL 376
              + ++++ L
Sbjct: 563 YVTIDILMEWL 573



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 160/340 (47%), Gaps = 37/340 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC--------- 62
           C PNTVTYN +    C+ G V  A  L  +M+ E + P+ VT N+++ GLC         
Sbjct: 242 CAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAAL 301

Query: 63  ----------------------------HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
                                       H N+   A  LF EM+D+G  P  + +  ++ 
Sbjct: 302 EFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMIS 361

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            L + G++D+A  +   M +   + +A  Y+ L+ GFC   ++N A EL G M+  G + 
Sbjct: 362 GLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQP 421

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D  +YN L++G CK  +      L  +M+  G +P+VVT+ TL  G  ++ Q++ AL++F
Sbjct: 422 DVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIF 481

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
             M    +  +T  YNT ID LCK+     A+ELF  +       ++  +N L+ GL   
Sbjct: 482 RSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDK 541

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              E A EL   +       D VT +I++  L   G+ D+
Sbjct: 542 NMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETDR 581



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 128/284 (45%), Gaps = 10/284 (3%)

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
            +   D A  L D +      P+   ++TL+D     G +    +LF SM     + + V
Sbjct: 114 PSSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVV 173

Query: 158 SYNILINGYCKNKEVEEALSLYREMVS--KGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
           +Y IL+ G CK   V +ALS+   M      + P VV  N +  GL +  +++ A+K  E
Sbjct: 174 TYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVE 233

Query: 216 EMQRD--DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
           E  R     A +T TYN      C+ G +  A EL   +   +   +    N ++ GLC 
Sbjct: 234 ERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCW 293

Query: 274 SGRLEIALELFRSLPRRVLVAD----VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
            GR+  ALE FR   +R +  +     VTY+ ++    +   +  A +LF +M +   +P
Sbjct: 294 VGRVGAALEFFRE--KRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSP 351

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           + I++ T+I G  +  +      +   MK+     DA   ++++
Sbjct: 352 DAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILI 395



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 4/111 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PNTV YNT+ID LCK      A  LF +M+ +++  +V T+N+L+ GL   N   +A  
Sbjct: 490 QPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFE 549

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
           L   M +    P  VT +++M+ L   G+ D     L   +Q D  P   T
Sbjct: 550 LMDLMREGRCTPDYVTIDILMEWLPVIGETDR----LKHFMQHDTTPKRMT 596


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 186/365 (50%), Gaps = 5/365 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+T TY ++I G C+   +D A  +F +M  E   P+  TY++LI+GLC++   NEA  
Sbjct: 260 KPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALD 319

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              EM   GV P+V TF   +  LC  G++++A ++   M ++  +PN +TY++L+ G  
Sbjct: 320 FISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG-- 377

Query: 133 LTGKINR-AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              +++R A  LF  M   G   + V+YN L+N   +N E++ AL ++  M   G  P  
Sbjct: 378 --QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNT 435

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +YN L  G   I   E A+ +   M +        TYN  I G C +G    A+ +   
Sbjct: 436 SSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLEL 495

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ D  +Y  LI G CK  ++E+A  +F  +  R L  + VTY  +I G C D +
Sbjct: 496 MKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEK 555

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D A  +   M+ +   PNV  +  LIHG  + N  S   EL   M E+K+ PD    S 
Sbjct: 556 LDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYST 615

Query: 372 VVDLL 376
           V++ L
Sbjct: 616 VINGL 620



 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 178/333 (53%), Gaps = 2/333 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GVV  PNTVTYN +++ L +   +D A  +F  M      P+  +YN LI G C   D  
Sbjct: 395 GVV--PNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTE 452

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  +   M+     P++VT+N+I+   C +G  D A R+L+LM     +P+ ++Y+ L+
Sbjct: 453 KAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELI 512

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            GFC   K+  A  +F  M   G   ++V+Y  LI+GYCK+++++ A  +   M   G +
Sbjct: 513 SGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCR 572

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P V TYN L  GL + +    A +L + M  + ++ D  TY+T I+GLC NG I  A+E+
Sbjct: 573 PNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEM 632

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +    C  ++  Y+ LI  L + GR+E A E+F  L ++ L+ D VTY  MI     
Sbjct: 633 FNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVM 692

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            G++D+A D   +M      P +  +  LI G 
Sbjct: 693 SGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL 725



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 187/353 (52%), Gaps = 3/353 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN  TY ++I G   +     A  LF +M  + + P+ VTYN+L++ L    + + A 
Sbjct: 364 CKPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSAL 420

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M   G  P+  ++N ++   C  G  ++A  +L  M++    P   TY+ ++ G+
Sbjct: 421 IVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGY 480

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +G  + A  +   M++ GC+ D+ SY  LI+G+CK  ++E A  ++ EM+ +G+ P  
Sbjct: 481 CDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNE 540

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY  L  G  +  +++ A ++ E M+R     +  TYN  I GL K      A EL + 
Sbjct: 541 VTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKV 600

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   K   D+  Y+ +I+GLC +G + +ALE+F  + +   + ++ TY+ +I  L  +G+
Sbjct: 601 MLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGR 660

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           +++A ++F ++++  + P+ + +V +I   V   K  +  + L +M      P
Sbjct: 661 VEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQP 713



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 174/349 (49%), Gaps = 5/349 (1%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY T++  L K          + Q+  E + P+++ YNS+I+ LC   +  +A+ +  ++
Sbjct: 195 TYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKV 254

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
              G++P   T+  ++   C+N  +D A  + + M +    PNA TYSTL++G C +G++
Sbjct: 255 FKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRV 314

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           N A +    M   G      ++   I   C    +E+A  ++ +M  KG KP V TY +L
Sbjct: 315 NEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSL 374

Query: 198 FLGLFEIHQVEH-ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
             G     +V   A+ LF  M RD V  +T TYN  ++ L +N  I  A+ +F  +G   
Sbjct: 375 ISG----QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHG 430

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
           C  +  +YN LI G C  G  E A+ +  ++ +      +VTYNI+I G C+ G  D A 
Sbjct: 431 CLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAI 490

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +   M+ N   P+   +  LI GF +I+K      + ++M ++ + P+
Sbjct: 491 RVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPN 539



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 174/374 (46%), Gaps = 30/374 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTYN II G C  G  D A  +   MK     PD  +Y  LI G C  +    A  +
Sbjct: 468 PTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGM 527

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EMMD+G+ P+ VT+  ++   CK+ K+D A+R+L+ M +   RPN  TY+ L+ G   
Sbjct: 528 FNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTK 587

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
               + AEEL   M       D V+Y+ +ING C N  +  AL ++ +MV  G  P + T
Sbjct: 588 QNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHT 647

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y++L   L +  +VE A ++F E+++  +  D  TY   I+    +G +  A +    + 
Sbjct: 648 YSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMI 707

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR---------RVLVADVVT------ 298
              C+  +Q Y+ LI GL    + E+      +LP          +++  DV++      
Sbjct: 708 NAGCQPTLQTYDVLIKGL----QNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKL 763

Query: 299 -----------YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
                      Y+ ++  L   G+  +A++L+  M   +  PN   +   +   +R  K 
Sbjct: 764 AELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKV 823

Query: 348 SKVIELLHKMKEKK 361
              +++   M +++
Sbjct: 824 DLAMDVFKHMSDQR 837



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 181/363 (49%), Gaps = 13/363 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  +I G CK+  +D A  +  +MK     P+V TYN LIHGL   N+++ A+ L
Sbjct: 538 PNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 597

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+++ + P VVT++ +++ LC NG +  A  + + MV+    PN  TYS+L+     
Sbjct: 598 CKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQ 657

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  AEE+F  ++  G   D+V+Y  +I     + +V+ A     EM++ G +PT+ T
Sbjct: 658 EGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQT 717

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  GL +   V H L           AA TST++  I     N  ++    L   L 
Sbjct: 718 YDVLIKGL-QNEMVYHKLVALPN------AASTSTFDDQI----INKDVISV--LSSKLA 764

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            L  EL  Q Y+ L+  L +SGR   A  L+RS+  +    +  TY   +  L    ++D
Sbjct: 765 ELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVD 824

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A D+F  M +     ++  +  LI    ++++  +   +  KM  + +  D  + ++++
Sbjct: 825 LAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILI 884

Query: 374 DLL 376
           + L
Sbjct: 885 NGL 887



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 165/343 (48%), Gaps = 26/343 (7%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN  TYN +I GL K+     A+ L   M  E I+PDVVTY+++I+GLC+      A 
Sbjct: 571 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLAL 630

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F +M+  G  P++ T++ ++  L + G+++EA  +   + ++ + P+  TY  +++  
Sbjct: 631 EMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVC 690

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILING------YCK----------------- 168
            ++GK++RA +  G M + GC+    +Y++LI G      Y K                 
Sbjct: 691 VMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQI 750

Query: 169 -NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
            NK+V   LS   ++     + +   Y+ L   L    +   A  L+  M       +  
Sbjct: 751 INKDVISVLS--SKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQD 808

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           TY  F+  L +   +  A+++F+ +   +CEL +  Y  LI  LC+  R + A  +F  +
Sbjct: 809 TYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKM 868

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
             R L AD + + I+I+GL   G  D   +    ME N   P+
Sbjct: 869 LSRALNADEIVWTILINGLLGAGYKDLCMEFLHIMETNRRNPS 911



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 149/304 (49%), Gaps = 10/304 (3%)

Query: 74  FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDL---MVQRDVRPNAFTYSTLMD 129
           + +M  Q G +  + T+  ++ +L    K++  S ++D    +++  ++PN   Y+++++
Sbjct: 180 YLDMFSQRGPKMGLFTYTTLLIQL---NKLNMTSTVMDRYHQILREGLQPNLLIYNSVIN 236

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             C  G +  AE +   +   G K D  +Y  +I GYC+N++++ A  ++  M  +G +P
Sbjct: 237 ALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEP 296

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
              TY+TL  GL    +V  AL    EM R  V     T+   I  LC  G I +A ++F
Sbjct: 297 NAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIF 356

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +    C+ ++  Y  LI G   S    +A+ LF  + R  +V + VTYN +++ L  +
Sbjct: 357 IDMKKKGCKPNVYTYTSLISGQRVS---RMAIGLFHRMSRDGVVPNTVTYNALMNVLMEN 413

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            ++D A  +F  M ++   PN   +  LI G+  I    K + +L  M + +  P     
Sbjct: 414 MEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTY 473

Query: 370 SMVV 373
           ++++
Sbjct: 474 NIII 477



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 1/200 (0%)

Query: 167 CKNK-EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
           C NK E+ +AL+       +G K  + TY TL + L +++     +  + ++ R+ +  +
Sbjct: 168 CSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPN 227

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
              YN+ I+ LCK+G + +A  +   +     + D   Y  +I G C++  L+ A E+F 
Sbjct: 228 LLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFN 287

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            +       +  TY+ +I+GLCN G++++A D   +M  + V P V  F   I     + 
Sbjct: 288 RMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMG 347

Query: 346 KPSKVIELLHKMKEKKVMPD 365
           +     ++   MK+K   P+
Sbjct: 348 RIEDAWKIFIDMKKKGCKPN 367



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 23/200 (11%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKAL-----FLQMKGENINPDVVTYNSLIHGLC 62
           I   C+P   TY+ +I GL  E    K  AL           + IN DV++  S      
Sbjct: 707 INAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLS------ 760

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
                ++   L FE+  Q        ++ ++  L ++G+  EA+ L   MV +   PN  
Sbjct: 761 -----SKLAELDFELSRQ-------LYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQD 808

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TY   +       K++ A ++F  M    C+     Y  LI   C+    +EA  ++ +M
Sbjct: 809 TYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKM 868

Query: 183 VSKGIKPTVVTYNTLFLGLF 202
           +S+ +    + +  L  GL 
Sbjct: 869 LSRALNADEIVWTILINGLL 888



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/167 (20%), Positives = 72/167 (43%), Gaps = 2/167 (1%)

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           A++L E   RD  AA        I        + +A+           ++ +  Y  L+ 
Sbjct: 144 AMRLLE--SRDRPAAVGRARIHMIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLI 201

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
            L K       ++ +  + R  L  +++ YN +I+ LC DG +  A  +   + ++ + P
Sbjct: 202 QLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKP 261

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +   + ++I G+ R        E+ ++M E+   P+A+  S +++ L
Sbjct: 262 DTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGL 308



 Score = 38.1 bits (87), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 26/114 (22%), Positives = 48/114 (42%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY   +  L +   VD A  +F  M  +     +  Y  LI  LC  +   EA+ +
Sbjct: 805 PNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFV 864

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           F +M+ + +    + + ++++ L   G  D     L +M      P++   + L
Sbjct: 865 FEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLHIMETNRRNPSSHARTIL 918


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 191/366 (52%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC PN VT++++IDGL K G VD A +L+ +M      P  + Y SLI          + 
Sbjct: 224 VCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDG 283

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            +++ EM+  G  P +   N  MD + K G+ ++   L   +      P+A +YS L+ G
Sbjct: 284 HKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHG 343

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               G  N   ELF +M+  GC  D  +YN +I+G+CK+ +V +A  L  EM  KG  PT
Sbjct: 344 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPT 403

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY ++  GL +I +++ A  LFEE + + +  +   Y++ IDG  K G I EA  +  
Sbjct: 404 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIME 463

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            L       ++  +NCL+D L K+  +  AL  F+S+       + +TY+I+I+GLC   
Sbjct: 464 ELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVR 523

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           + +KA   + +M++  + PN I + T+I G  +     +   L  + K    +PD++  +
Sbjct: 524 KFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYN 583

Query: 371 MVVDLL 376
            +++ L
Sbjct: 584 AMIEGL 589



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 191/363 (52%), Gaps = 1/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + YN I+  L K+  V++A  +F +MK + + P+V TYN LI  LC     N A  +
Sbjct: 123 PSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEI 181

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   G+ P+V+T N+++D LCK  K++EA  + + M  +   PNA T+S+L+DG   
Sbjct: 182 RDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGK 241

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A  L+  M   G     + Y  LI  + K    E+   +Y+EMV  G  P +  
Sbjct: 242 CGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTL 301

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            NT    +F+  + E    LF E+       D  +Y+  I GL K G   E  ELF  + 
Sbjct: 302 INTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMK 361

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C LD  AYN +IDG CKSG++  A +L   +  +     VVTY  +I GL    ++D
Sbjct: 362 EQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLD 421

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A+ LF + + N +  NV+++ +LI GF ++ +  +   ++ ++ +K + P+    + ++
Sbjct: 422 EAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 481

Query: 374 DLL 376
           D L
Sbjct: 482 DAL 484



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 181/363 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN +ID LC+EG ++ A  +   M+   + P+V+T N +I  LC A    EA  +
Sbjct: 157 PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSI 216

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M D+   P+ VTF+ ++D L K G++D+A  L + M+     P A  Y++L+  F  
Sbjct: 217 FEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFK 276

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+     +++  M   GC  D    N  ++   K  E E+  +L+RE+ + G  P   +
Sbjct: 277 CGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARS 336

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  GL +        +LF  M+      DT  YN  IDG CK+G + +A +L   + 
Sbjct: 337 YSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMK 396

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +      +  Y  +IDGL K  RL+ A  LF       +  +VV Y+ +I G    G++D
Sbjct: 397 VKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRID 456

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A+ +  ++ +  + PNV  +  L+   V+  + ++ +     MK+ K  P+    S+++
Sbjct: 457 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILI 516

Query: 374 DLL 376
           + L
Sbjct: 517 NGL 519



 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 177/351 (50%), Gaps = 1/351 (0%)

Query: 26  LCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPS 85
           LCK   +D+A  LF Q++     P    YN++I G   A  ++EA  L      +G  PS
Sbjct: 65  LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124

Query: 86  VVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFG 145
           V+ +N I+  L K  +++EA R+ + M +RD  PN  TY+ L+D  C  GK+N A E+  
Sbjct: 125 VIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRD 183

Query: 146 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 205
            ME  G   + ++ NI+I+  CK +++EEA S++  M  K   P  VT+++L  GL +  
Sbjct: 184 DMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 243

Query: 206 QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYN 265
           +V+ A  L+E+M           Y + I    K G   +  ++++ +    C  D+   N
Sbjct: 244 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLIN 303

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
             +D + K+G  E    LFR +     + D  +Y+I+IHGL   G  ++ ++LF  M+E 
Sbjct: 304 TYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQ 363

Query: 326 AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               +   +  +I GF +  K +K  +LL +MK K   P       V+D L
Sbjct: 364 GCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGL 414



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 158/308 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+    NT +D + K G  +K +ALF ++      PD  +Y+ LIHGL  A   NE  
Sbjct: 295 CSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETY 354

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF+ M +QG       +N ++D  CK+GK+++A +LL+ M  +   P   TY +++DG 
Sbjct: 355 ELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGL 414

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +++ A  LF   +S G K + V Y+ LI+G+ K   ++EA  +  E++ KG+ P V
Sbjct: 415 AKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 474

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+N L   L +  ++  AL  F+ M+      +  TY+  I+GLC+     +A   ++ 
Sbjct: 475 YTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQE 534

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  L  + +   Y  +I GL K+G +  A  LF        + D  +YN MI GL +  +
Sbjct: 535 MQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANK 594

Query: 312 MDKAHDLF 319
              A+ LF
Sbjct: 595 AMDAYALF 602



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 149/269 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +T  YN +IDG CK G V+KA  L  +MK +   P VVTY S+I GL   +  +EA 
Sbjct: 365 CVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAY 424

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF E    G++ +VV ++ ++D   K G++DEA  +++ ++Q+ + PN +T++ L+D  
Sbjct: 425 MLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 484

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +IN A   F SM+ + C  + ++Y+ILING C+ ++  +A   ++EM   G+KP  
Sbjct: 485 VKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNT 544

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY T+  GL +   +  A  LF   + +    D+++YN  I+GL      ++A  LF  
Sbjct: 545 ITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEE 604

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIA 280
             +  C +  +    L+D L K+  LE A
Sbjct: 605 TRLKGCNIHTKTCVVLLDALHKAECLEQA 633



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 52/94 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPNT+TY T+I GL K G + +A  LF + K     PD  +YN++I GL  AN   +A  
Sbjct: 541 KPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYA 600

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           LF E   +G      T  V++D L K   +++A+
Sbjct: 601 LFEETRLKGCNIHTKTCVVLLDALHKAECLEQAA 634


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/331 (33%), Positives = 180/331 (54%), Gaps = 3/331 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVTYNSLIHGLCHANDWNEAK 71
           PN  TY T+I G CK G VD+A  +F +M  KGE + P+ V YN+LI G C     + A 
Sbjct: 548 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE-VKPEAVMYNALIGGYCDQGKLDTAL 606

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                M+++GV  +V T+N+++  L  +G+  EA  L++ M  + + P+ FTY+ L++G 
Sbjct: 607 LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGH 666

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + +A E+F +M   G +   V+Y  LI    K  +V+E   L+ E V +GI+P +
Sbjct: 667 CKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL 726

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YN L         ++ A ++  EM++  +A D  TYNT + GLC  G + EA +L   
Sbjct: 727 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 786

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D+  YN LI G    G ++ AL +   +  +     ++TYN +I GLC +GQ
Sbjct: 787 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 846

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
            D A ++  +M EN + P+   +++LI G  
Sbjct: 847 GDDAENMVKEMVENGITPDDSTYISLIEGLT 877



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 175/351 (49%), Gaps = 6/351 (1%)

Query: 16  TVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFF 75
           T T+N ++  LC  G   +A  L  QM      P+ VTYN++I G C       A  +  
Sbjct: 483 TTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMR 538

Query: 76  EMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR-DVRPNAFTYSTLMDGFCL 133
           EM ++ G+ P+  T+  ++   CK G++DEA ++ D M+ + +V+P A  Y+ L+ G+C 
Sbjct: 539 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 598

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A      M   G      +YN+L++    +    EA  L  EM  KG+ P V T
Sbjct: 599 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 658

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +   V+ AL++FE M R  V A   TY   I  L K G + E  +LF    
Sbjct: 659 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 718

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+  YN LI+    SG ++ A E+   + ++ +  D VTYN ++ GLC  G++D
Sbjct: 719 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 778

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           +A  L  +M E  + P+++ + TLI G+         + + ++M  K   P
Sbjct: 779 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 829



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 175/330 (53%), Gaps = 10/330 (3%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           L+ +MK  ++     + + L+  L  A     A  LF +M    +     TFN+++  LC
Sbjct: 439 LYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRHLC 494

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM-ESMGCKHDD 156
             GK    +R L+L+ Q   RPNA TY+T++ GFC  G++  A ++   M E  G   + 
Sbjct: 495 SAGK---PARALELLRQMP-RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQ 550

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKG-IKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
            +Y  +I+G+CK   V+EA+ ++ EM++KG +KP  V YN L  G  +  +++ AL   +
Sbjct: 551 YTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRD 610

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
            M    VA   +TYN  +  L  +G   EA EL   +G      D+  YN LI+G CK G
Sbjct: 611 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEG 670

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
            ++ ALE+F ++ RR + A VVTY  +I+ L   GQ+ +   LF +     + P+++++ 
Sbjct: 671 NVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYN 730

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            LI+         +  E++ +M++K++ PD
Sbjct: 731 ALINSHSTSGNIDRAFEIMGEMEKKRIAPD 760



 Score =  103 bits (258), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 87/159 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V YN +I+     G +D+A  +  +M+ + I PD VTYN+L+ GLC     +EA++
Sbjct: 723 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARK 782

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM ++G+QP +VT+N ++      G + +A R+ + M+ +   P   TY+ L+ G C
Sbjct: 783 LIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 842

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
             G+ + AE +   M   G   DD +Y  LI G     E
Sbjct: 843 KNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 881



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 102/213 (47%), Gaps = 22/213 (10%)

Query: 175 ALSLYREMVS--KGIKPTVVTY----------NTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           AL+L++ ++S  K + P  V            N L      +     +L+L+  M+   +
Sbjct: 389 ALALFKSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSL 448

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
              T++ +  +  L          ++FR    L+  L    +N ++  LC +G+   ALE
Sbjct: 449 PISTASLHPLLSALPSAPAFALFADMFR----LRLPLCTTTFNIMLRHLCSAGKPARALE 504

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM-EENAVAPNVIIFVTLIHGF 341
           L R +PR     + VTYN +I G C+ G++  A D+  +M E   +APN   + T+I G+
Sbjct: 505 LLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 560

Query: 342 VRINKPSKVIELLHKMKEK-KVMPDASIVSMVV 373
            ++ +  + +++  +M  K +V P+A + + ++
Sbjct: 561 CKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 593


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 193/366 (52%), Gaps = 5/366 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T TYN +I  LC  G V  A A+F  M     +P VVTY+ L+   C  + + +A  L
Sbjct: 158 PDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVL 217

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G +P +VT+NV+++ +C  G + EA ++L+ +     +P+A TY+ ++   C 
Sbjct: 218 LDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCS 277

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           + +   A++L   M S  C  D+V++N +I   C+   V  A  +  +M   G  P ++T
Sbjct: 278 SERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIIT 337

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVA----ADTSTYNTFIDGLCKNGYIVEAVELF 249
           Y+++  GL +  +V+ A+KL +E+  + V+     D  T+NT I  LC+ G    A+++ 
Sbjct: 338 YSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVV 397

Query: 250 RTLGILKCELDIQAYNCLIDG-LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
             +    C  DI  YNC++DG LCKS + E AL+L   +    L  D  TY  +  GL  
Sbjct: 398 DEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSR 457

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           + +M++A  +F  ++   ++P+ +++  ++ G  +  +    I+    M     MPD S 
Sbjct: 458 EDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDEST 517

Query: 369 VSMVVD 374
             ++V+
Sbjct: 518 YIILVE 523



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 172/336 (51%), Gaps = 5/336 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY+ ++D  CKE    +A  L  +M+ +   PD+VTYN LI+ +C   D  EA 
Sbjct: 191 CSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEAL 250

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++   +   G +P  VT+  ++  LC + + +EA +LL  M   D  P+  T++ ++   
Sbjct: 251 KVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSL 310

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR----EMVSKGI 187
           C  G + RA ++   M   GC  D ++Y+ +++G CK + V+EA+ L +    EMVSK  
Sbjct: 311 CQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNC 370

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG-LCKNGYIVEAV 246
            P  VT+NT+   L +    + A+K+ +EM       D +TYN  +DG LCK+    EA+
Sbjct: 371 IPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEAL 430

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +L   +       D   Y  L  GL +   +E A+ +FR +    L  D + YN ++ GL
Sbjct: 431 DLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGL 490

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           C   + D A D F  M  N   P+   ++ L+ G  
Sbjct: 491 CKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIA 526



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 185/362 (51%), Gaps = 17/362 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPD--VVTYNSLIHGLCHANDWNEAK 71
           P  +  N +I  LC +G V  A+ +      E + P   ++TYN++++G C A + + A+
Sbjct: 94  PAVIPCNILIKKLCADGRVADAERVV-----EALGPSATIITYNTMVNGYCRAGNIDAAR 148

Query: 72  RLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           R    M+D     P   T+N ++  LC  G + +A  + D M+ R   P+  TYS L+D 
Sbjct: 149 R----MIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDA 204

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C      +A  L   M S GC+ D V+YN+LIN  C   +V EAL +   + S G KP 
Sbjct: 205 TCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPD 264

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            VTY  +   L    + E A KL  +M  +D A D  T+N  I  LC+ G++  A ++  
Sbjct: 265 AVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLA 324

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL----VADVVTYNIMIHGL 306
            +    C  DI  Y+ ++DGLCK  R++ A++L + L   ++    + D VT+N +I  L
Sbjct: 325 QMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSL 384

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV-RINKPSKVIELLHKMKEKKVMPD 365
           C  G  D+A  +  +M E+   P++  +  ++ GF+ +  K  + ++LL+ M    + PD
Sbjct: 385 CQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPD 444

Query: 366 AS 367
            +
Sbjct: 445 TT 446



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/281 (33%), Positives = 148/281 (52%), Gaps = 5/281 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+ VTY  ++  LC     ++A  L  +M   +  PD VT+N++I  LC       A 
Sbjct: 261 CKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRAT 320

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL----MVQRDVRPNAFTYSTL 127
           ++  +M + G  P ++T++ IMD LCK  ++DEA +LL      MV ++  P+  T++T+
Sbjct: 321 KVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTI 380

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY-CKNKEVEEALSLYREMVSKG 186
           +   C  G  +RA ++   M   GC  D  +YN +++G+ CK+ + EEAL L   MVS G
Sbjct: 381 ITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNG 440

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P   TY +L  GL    ++E A+ +F  +Q   ++ D   YN  + GLCK      A+
Sbjct: 441 LCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAI 500

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           + F  +    C  D   Y  L++G+   G LE A EL  +L
Sbjct: 501 DFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNL 541



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 169/328 (51%), Gaps = 14/328 (4%)

Query: 55  NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
           N  + GL    + + A RL   +   G  P+V+  N+++ +LC +G++ +A R+++ +  
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL-- 122

Query: 115 RDVRPNA--FTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
               P+A   TY+T+++G+C  G I+ A  +   ++S+    D  +YN LI   C    V
Sbjct: 123 ---GPSATIITYNTMVNGYCRAGNIDAARRM---IDSVPFAPDTFTYNPLIRALCVRGCV 176

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
            +AL+++ +M+ +G  P+VVTY+ L     +    + A+ L +EM+      D  TYN  
Sbjct: 177 LDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVL 236

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           I+ +C  G + EA+++  +L    C+ D   Y  ++  LC S R E A +L   +     
Sbjct: 237 INAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDC 296

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV---RINKPSK 349
             D VT+N +I  LC  G + +A  +   M E+   P++I + +++ G     R+++  K
Sbjct: 297 APDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIK 356

Query: 350 VI-ELLHKMKEKKVMPDASIVSMVVDLL 376
           ++ ELL +M  K  +PD    + ++  L
Sbjct: 357 LLKELLAEMVSKNCIPDQVTFNTIITSL 384


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 189/400 (47%), Gaps = 41/400 (10%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN +TYN ++ GLC+ G + +  AL  +M  + + PD  TY+ L  GL    D      
Sbjct: 263 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 322

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF + +  GV     T +++++ LCK+GK+  A  +L  +V   + P    Y+TL++G+C
Sbjct: 323 LFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYC 382

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            TG++  A   FG M+S   K D ++YN LING CK + +  A  L  EM   G+ PTV 
Sbjct: 383 QTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVE 442

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV------ 246
           T+NTL        Q+E    +  EMQ + +  +  +Y + ++  CKNG I EAV      
Sbjct: 443 TFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM 502

Query: 247 --------------------------------ELFRTLGILKCELDIQAYNCLIDGLCKS 274
                                           E  ++ GI      I  YN LI GLC  
Sbjct: 503 FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGI---SPSIVTYNLLIKGLCNQ 559

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            ++  A E+  SL    L+ D V+YN +I   C  G +DKA DL   M +  +   V  +
Sbjct: 560 SQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 619

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             LI G     +  ++  L  KM +  V+P  +I +++V+
Sbjct: 620 HQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVE 659



 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 181/357 (50%), Gaps = 2/357 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  +YN +I G+ + G    A  +F +M    + P+ +TYN++I G     D      L
Sbjct: 194 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSL 253

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+  G++P+ +T+NV++  LC+ G+M E S LLD M  + + P+ FTYS L DG   
Sbjct: 254 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 313

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G       LFG     G    D + +IL+NG CK+ +V  A  + + +V+ G+ PT V 
Sbjct: 314 NGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 373

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G  +  ++E A   F +M+   +  D  TYN  I+GLCK   I  A +L   + 
Sbjct: 374 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 433

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  ++ +N LID   ++G+LE    +   +    L  +VV+Y  +++  C +G++ 
Sbjct: 434 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 493

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +A  +  DM    V PN  ++  +I  +V      +   L+ KMK   + P  SIV+
Sbjct: 494 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP--SIVT 548



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 176/344 (51%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T + +++GLCK+G V  A+ +   +    + P  V YN+LI+G C   +   A   F +M
Sbjct: 338 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 397

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
             + ++P  +T+N +++ LCK  ++  A  LL  M    V P   T++TL+D +  TG++
Sbjct: 398 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 457

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
            +   +   M+  G K + VSY  ++N +CKN ++ EA+++  +M  K + P    YN +
Sbjct: 458 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 517

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
                E    + A  L E+M+ + ++    TYN  I GLC    I EA E+  +L   + 
Sbjct: 518 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRL 577

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D  +YN LI   C  G ++ AL+L + + +  + + V TY+ +I GL   G++ +   
Sbjct: 578 IPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEY 637

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           L+  M +N V P+  I   ++  + +     K  +L  +M +K+
Sbjct: 638 LYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 681



 Score =  147 bits (371), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 141/273 (51%), Gaps = 1/273 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ +TYN +I+GLCK   +  A+ L ++M+   +NP V T+N+LI          +   
Sbjct: 403 KPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFI 462

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM + G++P+VV++  I++  CKNGK+ EA  +LD M  +DV PNA  Y+ ++D + 
Sbjct: 463 VLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYV 522

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  ++A  L   M+S G     V+YN+LI G C   ++ EA  +   + +  + P  V
Sbjct: 523 EHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAV 582

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNTL         ++ AL L + M +  + +   TY+  I GL   G ++E   L++ +
Sbjct: 583 SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKM 642

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
                      +N +++   K G  EI  E  R
Sbjct: 643 MQNNVVPSNAIHNIMVEAYSKYGN-EIKAEDLR 674



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 157/345 (45%), Gaps = 42/345 (12%)

Query: 70  AKRLFFEMMDQGVQP--SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR--------- 118
           A RL  ++ D+   P  S+ + N++++ L   G+  +  R   ++     R         
Sbjct: 107 ALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKA 166

Query: 119 ---------------------------PNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
                                      PNAF+Y+ ++ G    G+   A E+F  M    
Sbjct: 167 VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA 226

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
              + ++YN +I+G+ K  ++E   SL  +MV  G+KP  +TYN L  GL    ++    
Sbjct: 227 VLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETS 286

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC--LID 269
            L +EM    +  D  TY+   DGL +NG     + LF     LK  + I  Y C  L++
Sbjct: 287 ALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGK--SLKNGVTIGDYTCSILLN 344

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           GLCK G++ IA E+ +SL    LV   V YN +I+G C  G+++ A   F  M+   + P
Sbjct: 345 GLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKP 404

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + I +  LI+G  +  + +   +LL +M++  V P     + ++D
Sbjct: 405 DHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLID 449



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 85/172 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   YN IID   + G  D+A  L  +MK   I+P +VTYN LI GLC+ +  +EA+ +
Sbjct: 509 PNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEI 568

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              + +  + P  V++N ++   C  G +D+A  L   M +  ++    TY  L+ G   
Sbjct: 569 INSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGG 628

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            G++   E L+  M        +  +NI++  Y K     +A  L +EM+ K
Sbjct: 629 AGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 680



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 75/145 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ VTYN +I GLC +  + +A+ +   +    + PD V+YN+LI   C+  + ++A  
Sbjct: 543 SPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 602

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M   G++ +V T++ ++  L   G++ E   L   M+Q +V P+   ++ +++ + 
Sbjct: 603 LQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYS 662

Query: 133 LTGKINRAEELFGSMESMGCKHDDV 157
             G   +AE+L   M      HDD 
Sbjct: 663 KYGNEIKAEDLRKEMLQKRNNHDDT 687


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 191/366 (52%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC PN VT++++IDGL K G VD A +L+ +M      P  + Y SLI          + 
Sbjct: 469 VCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDG 528

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            +++ EM+  G  P +   N  MD + K G+ ++   L   +      P+A +YS L+ G
Sbjct: 529 HKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHG 588

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               G  N   ELF +M+  GC  D  +YN +I+G+CK+ +V +A  L  EM  KG  PT
Sbjct: 589 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPT 648

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY ++  GL +I +++ A  LFEE + + +  +   Y++ IDG  K G I EA  +  
Sbjct: 649 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIME 708

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            L       ++  +NCL+D L K+  +  AL  F+S+       + +TY+I+I+GLC   
Sbjct: 709 ELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVR 768

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           + +KA   + +M++  + PN I + T+I G  +     +   L  + K    +PD++  +
Sbjct: 769 KFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYN 828

Query: 371 MVVDLL 376
            +++ L
Sbjct: 829 AMIEGL 834



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 191/363 (52%), Gaps = 1/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + YN I+  L K+  V++A  +F +MK + + P+V TYN LI  LC     N A  +
Sbjct: 368 PSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEI 426

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   G+ P+V+T N+++D LCK  K++EA  + + M  +   PNA T+S+L+DG   
Sbjct: 427 RDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGK 486

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A  L+  M   G     + Y  LI  + K    E+   +Y+EMV  G  P +  
Sbjct: 487 CGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTL 546

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            NT    +F+  + E    LF E+       D  +Y+  I GL K G   E  ELF  + 
Sbjct: 547 INTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMK 606

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C LD  AYN +IDG CKSG++  A +L   +  +     VVTY  +I GL    ++D
Sbjct: 607 EQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLD 666

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A+ LF + + N +  NV+++ +LI GF ++ +  +   ++ ++ +K + P+    + ++
Sbjct: 667 EAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 726

Query: 374 DLL 376
           D L
Sbjct: 727 DAL 729



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 185/363 (50%), Gaps = 1/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY ++I  LCK   +D+A  LF Q++     P    YN++I G   A  ++EA  L
Sbjct: 298 PDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGL 357

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
                 +G  PSV+ +N I+  L K  +++EA R+ + M +RD  PN  TY+ L+D  C 
Sbjct: 358 LERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCR 416

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+N A E+   ME  G   + ++ NI+I+  CK +++EEA S++  M  K   P  VT
Sbjct: 417 EGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVT 476

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +++L  GL +  +V+ A  L+E+M           Y + I    K G   +  ++++ + 
Sbjct: 477 FSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMV 536

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D+   N  +D + K+G  E    LFR +     + D  +Y+I+IHGL   G  +
Sbjct: 537 HTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLAN 596

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           + ++LF  M+E     +   +  +I GF +  K +K  +LL +MK K   P       V+
Sbjct: 597 ETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVI 656

Query: 374 DLL 376
           D L
Sbjct: 657 DGL 659



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 181/363 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN +ID LC+EG ++ A  +   M+   + P+V+T N +I  LC A    EA  +
Sbjct: 402 PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSI 461

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M D+   P+ VTF+ ++D L K G++D+A  L + M+     P A  Y++L+  F  
Sbjct: 462 FEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFK 521

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+     +++  M   GC  D    N  ++   K  E E+  +L+RE+ + G  P   +
Sbjct: 522 CGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARS 581

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  GL +        +LF  M+      DT  YN  IDG CK+G + +A +L   + 
Sbjct: 582 YSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMK 641

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +      +  Y  +IDGL K  RL+ A  LF       +  +VV Y+ +I G    G++D
Sbjct: 642 VKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRID 701

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A+ +  ++ +  + PNV  +  L+   V+  + ++ +     MK+ K  P+    S+++
Sbjct: 702 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILI 761

Query: 374 DLL 376
           + L
Sbjct: 762 NGL 764



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 158/308 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+    NT +D + K G  +K +ALF ++      PD  +Y+ LIHGL  A   NE  
Sbjct: 540 CSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETY 599

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF+ M +QG       +N ++D  CK+GK+++A +LL+ M  +   P   TY +++DG 
Sbjct: 600 ELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGL 659

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +++ A  LF   +S G K + V Y+ LI+G+ K   ++EA  +  E++ KG+ P V
Sbjct: 660 AKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 719

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+N L   L +  ++  AL  F+ M+      +  TY+  I+GLC+     +A   ++ 
Sbjct: 720 YTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQE 779

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  L  + +   Y  +I GL K+G +  A  LF        + D  +YN MI GL +  +
Sbjct: 780 MQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANK 839

Query: 312 MDKAHDLF 319
              A+ LF
Sbjct: 840 AMDAYALF 847



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 149/269 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +T  YN +IDG CK G V+KA  L  +MK +   P VVTY S+I GL   +  +EA 
Sbjct: 610 CVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAY 669

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF E    G++ +VV ++ ++D   K G++DEA  +++ ++Q+ + PN +T++ L+D  
Sbjct: 670 MLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 729

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +IN A   F SM+ + C  + ++Y+ILING C+ ++  +A   ++EM   G+KP  
Sbjct: 730 VKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNT 789

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY T+  GL +   +  A  LF   + +    D+++YN  I+GL      ++A  LF  
Sbjct: 790 ITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEE 849

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIA 280
             +  C +  +    L+D L K+  LE A
Sbjct: 850 TRLKGCNIHTKTCVVLLDALHKAECLEQA 878



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 183/395 (46%), Gaps = 36/395 (9%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N   + T+I    +EG VD A +L  +MK  +++ D+V YN  I     A   + + + F
Sbjct: 229 NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFF 288

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM   G+ P  VT+  ++  LCK  ++DEA  L + + Q    P A+ Y+T++ G+   
Sbjct: 289 HEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSA 348

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK + A  L    ++ G     ++YN ++    K + VEEAL ++ EM    + P V TY
Sbjct: 349 GKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTY 407

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L   L    ++  AL++ ++M+R  +  +  T N  ID LCK   + EA  +F  +  
Sbjct: 408 NILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDD 467

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSL------PRRVLVADVVT---------- 298
             C  +   ++ LIDGL K GR++ A  L+  +      P  ++   ++           
Sbjct: 468 KVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKED 527

Query: 299 ----YNIMIHGLCND---------------GQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
               Y  M+H  C+                G+ +K   LF ++  +   P+   +  LIH
Sbjct: 528 GHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIH 587

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           G V+    ++  EL + MKE+  + D    + V+D
Sbjct: 588 GLVKAGLANETYELFYAMKEQGCVLDTHAYNAVID 622



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 174/362 (48%), Gaps = 1/362 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P    Y  +I  L +    D    LF QM+      +V  + +LI         + A  
Sbjct: 192 RPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALS 251

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM    +   +V +NV +D   K GK+D + +    M    + P+  TY++++   C
Sbjct: 252 LLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLC 311

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +++ A ELF  +E         +YN +I GY    + +EA  L     +KG  P+V+
Sbjct: 312 KANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVI 371

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN +   L +  +VE AL++FEEM+RD V  +  TYN  ID LC+ G +  A+E+   +
Sbjct: 372 AYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDM 430

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++   N +ID LCK+ +LE A  +F  +  +V   + VT++ +I GL   G++
Sbjct: 431 ERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRV 490

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A+ L+  M +    P  I++ +LI  F +  +     ++  +M      PD ++++  
Sbjct: 491 DDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTY 550

Query: 373 VD 374
           +D
Sbjct: 551 MD 552



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 164/359 (45%), Gaps = 1/359 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
            YN+++  + +    D  + +  +M      P       L+     +    EA  +   M
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
                +P+   + +++  L +  + D    L   M +     N   ++TL+  F   G++
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  L   M+S     D V YN+ I+ + K  +V+ +   + EM S G+ P  VTY ++
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
              L + ++++ A++LFE+++++        YNT I G    G   EA  L         
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGS 366

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
              + AYNC++  L K  R+E AL +F  + +R  V +V TYNI+I  LC +G+++ A +
Sbjct: 367 IPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALE 425

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +  DME   + PNV+    +I    +  K  +   +   M +K   P+A   S ++D L
Sbjct: 426 IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGL 484



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 52/94 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPNT+TY T+I GL K G + +A  LF + K     PD  +YN++I GL  AN   +A  
Sbjct: 786 KPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYA 845

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           LF E   +G      T  V++D L K   +++A+
Sbjct: 846 LFEETRLKGCNIHTKTCVVLLDALHKAECLEQAA 879


>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
 gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
          Length = 381

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 186/357 (52%), Gaps = 1/357 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN VTYN IID +C+EG VD+A+ L   +      P+ V YN+++ GLC    W +A+
Sbjct: 12  CEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAE 71

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+ +   P+  T NVI++ L + G + + +R L+ M +     N  TY+ ++ G 
Sbjct: 72  ELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGM 131

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G ++ A EL  +M+S GCK D V+YN L+ G C   + E+A  L  +M      P  
Sbjct: 132 CEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDN 191

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+NT+   L +   +  A ++F++M       +++TY+T I GL K G + +A+EL   
Sbjct: 192 VTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNE 251

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D + Y  L + L K  ++E  +++   L    +    V +N ++  LC +G+
Sbjct: 252 MASKGYNTD-KMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGK 310

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            D A D+  DM      P+ + ++ LI G        +  EL+ ++  + V+ ++ I
Sbjct: 311 TDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRLCSRDVLSNSLI 367



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 170/324 (52%), Gaps = 1/324 (0%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           M+ E   P+VVTYN +I  +C   D ++A+ L   +  +G +P+ V +N ++  LC   +
Sbjct: 7   MRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIER 66

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
             +A  LLD MV+ +  PN  T + +++     G + +       M   GC  + V+YN 
Sbjct: 67  WVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNA 126

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           +I+G C+   V+ AL L   M S G KP +VTYNTL  GL    Q E A +L  +M ++D
Sbjct: 127 VISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQND 186

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              D  T+NT I  LC+ G I++A E+F+ +    C  +   Y+ +I GL K+G++E AL
Sbjct: 187 CLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQAL 246

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           EL   +  +    D + Y ++   L  + ++++   +   ++++ ++P  ++F T++   
Sbjct: 247 ELLNEMASKGYNTDKM-YQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVL 305

Query: 342 VRINKPSKVIELLHKMKEKKVMPD 365
            R  K    I++L  M     MPD
Sbjct: 306 CRNGKTDYAIDVLADMVSYGCMPD 329



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 130/254 (51%)

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
            L+DLM      PN  TY+ ++D  C  G +++A EL  S+ S GCK + V+YN ++ G 
Sbjct: 2   ELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGL 61

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           C  +   +A  L  EMV +   P   T N +   L     ++   +  E+M +    A+ 
Sbjct: 62  CSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANV 121

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            TYN  I G+C+ G++  A+EL   +    C+ DI  YN L+ GLC + + E A EL   
Sbjct: 122 VTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIK 181

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           + +   + D VT+N +I  LC  G + +A ++F  M E    PN   + T+I G  +  K
Sbjct: 182 MSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGK 241

Query: 347 PSKVIELLHKMKEK 360
             + +ELL++M  K
Sbjct: 242 MEQALELLNEMASK 255



 Score =  134 bits (337), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 123/232 (53%)

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
           EL   M + GC+ + V+YN++I+  C+  +V++A  L   + S+G KP  V YNT+  GL
Sbjct: 2   ELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGL 61

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
             I +   A +L +EM R++   + +T N  ++ L + G + +       +    C  ++
Sbjct: 62  CSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANV 121

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
             YN +I G+C+ G ++ ALEL  ++       D+VTYN ++ GLC+  Q + A +L + 
Sbjct: 122 VTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIK 181

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           M +N   P+ + F T+I    +     +  E+  +M EK   P+++  S ++
Sbjct: 182 MSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTII 233



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 104/263 (39%), Gaps = 69/263 (26%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N VTYN +I G+C++G VD A  L   M+     PD+VTYN+L+ GLC A+ W +A+
Sbjct: 117 CTANVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAE 176

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELC---------------------------------- 97
            L  +M      P  VTFN I+  LC                                  
Sbjct: 177 ELMIKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGL 236

Query: 98  -KNGKMDEASRLLDLMVQRD----------------------------------VRPNAF 122
            K GKM++A  LL+ M  +                                   + P   
Sbjct: 237 AKAGKMEQALELLNEMASKGYNTDKMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTV 296

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
            ++T++   C  GK + A ++   M S GC  D+++Y ILI G      ++EA  L   +
Sbjct: 297 LFNTVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRL 356

Query: 183 VSKGIKPTVVTYNTLFLGLFEIH 205
            S+ +    +  N   L    IH
Sbjct: 357 CSRDVLSNSLIKNEALLLDQNIH 379



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 92/195 (47%)

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M ++G +P VVTYN +   +     V+ A +L   +       +T  YNT + GLC    
Sbjct: 7   MRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIER 66

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
            V+A EL   +    C  +    N +++ L + G L+        + +    A+VVTYN 
Sbjct: 67  WVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNA 126

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +I G+C  G +D A +L  +M+     P+++ + TL+ G    ++     EL+ KM +  
Sbjct: 127 VISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQND 186

Query: 362 VMPDASIVSMVVDLL 376
            +PD    + ++  L
Sbjct: 187 CLPDNVTFNTIISFL 201


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 188/362 (51%), Gaps = 1/362 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+ +  +PN   YN +I+G C+E  V +   L  QM  + I+P+V+TY+++I  L    +
Sbjct: 240 ELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGN 299

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
              A  ++ +M  +G  P+V TF  +M      G++ EA  + + M +    PN   Y+T
Sbjct: 300 VELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNT 359

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ G C  GK+  A  +   ME  GC  +  +Y  LI+G+ K  ++  A  ++ +M++ G
Sbjct: 360 LIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNG 419

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
             P VV Y ++   L        A  L E+M  D+   +T T+NTFI GLC +G +  A+
Sbjct: 420 CIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAI 479

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            LF  +    C  +I+ YN ++DGL K  R++ ALEL   +  + +  ++VTYN +  G 
Sbjct: 480 NLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGF 539

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE-KKVMPD 365
           CN G+ ++A  L   M    V P+ I + TL + +    K    I+LL K+    K +P+
Sbjct: 540 CNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPE 599

Query: 366 AS 367
            +
Sbjct: 600 VA 601



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 176/365 (48%), Gaps = 5/365 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P    YN ++D +  E      + ++  MK +   P+V TYN L+  LC  N  + A 
Sbjct: 145 CQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGAC 204

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  EM ++G +P VV++  ++  + K GK++EA R L +  Q    PN   Y+ L++GF
Sbjct: 205 KLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA-RELSIRFQ----PNVSVYNALINGF 259

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K+     L G M   G   + ++Y+ +I+       VE AL+++ +M  +G  P V
Sbjct: 260 CREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNV 319

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+ +L  G F   +V  AL ++  M  +    +   YNT I GLC +G + EAV +   
Sbjct: 320 YTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSK 379

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  ++  Y  LIDG  K+G L  A E++  +     + +VV Y  M++ LC    
Sbjct: 380 MERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSM 439

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
             +A  L   M  +   PN + F T I G     +    I L  +M++    P+    + 
Sbjct: 440 FSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNE 499

Query: 372 VVDLL 376
           V+D L
Sbjct: 500 VLDGL 504



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 161/308 (52%), Gaps = 2/308 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V YNT+I GLC  G + +A ++  +M+    +P+V TY +LI G   A D   A  
Sbjct: 351 EPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASE 410

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++ +MM  G  P+VV +  +++ LC++    +A  L++ M   +  PN  T++T + G C
Sbjct: 411 IWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLC 470

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            +G++  A  LF  ME  GC  +  +YN +++G  K   ++EAL L  EM  KG++  +V
Sbjct: 471 CSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLV 530

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNT+F G   + + E ALKL  +M    V  D  TYNT     C  G +  A++L   L
Sbjct: 531 TYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKL 590

Query: 253 GIL-KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND-G 310
               K   ++ AY  L+ G+C    +E A+     +    +  +  T+N ++ GL N  G
Sbjct: 591 SAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLG 650

Query: 311 QMDKAHDL 318
            +   H L
Sbjct: 651 HLGPIHIL 658



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 170/355 (47%), Gaps = 40/355 (11%)

Query: 22  IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG 81
           +I+   + G  ++A  +F +++     P V  YN L+  +   N +   + ++  M   G
Sbjct: 120 VINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDG 179

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
            +P+V T+N+++  LCKN ++D A +LL  M  +   P+  +Y+T++      GK+  A 
Sbjct: 180 KEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAR 239

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
           EL     S+  + +   YN LING+C+  +V+E   L  +MV KGI P V+TY+T+   L
Sbjct: 240 EL-----SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSL 294

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
             I  VE AL ++ +M              F+ G                     C  ++
Sbjct: 295 SGIGNVELALAVWAKM--------------FVRG---------------------CSPNV 319

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
             +  L+ G    GR+  AL ++  +       +VV YN +IHGLC+ G+M +A  +   
Sbjct: 320 YTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSK 379

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           ME N  +PNV  +  LI GF +        E+ +KM     +P+  + + +V++L
Sbjct: 380 MERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVL 434



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 119/226 (52%), Gaps = 1/226 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN V Y ++++ LC+     +A +L  +M  +N  P+ VT+N+ I GLC +     A 
Sbjct: 420 CIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAI 479

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF +M   G  P++ T+N ++D L K  ++ EA  L+  M ++ +  N  TY+T+  GF
Sbjct: 480 NLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGF 539

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-IKPT 190
           C  GK   A +L G M   G K D ++YN L   YC   +V+ A+ L  ++ + G   P 
Sbjct: 540 CNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPE 599

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           V  Y +L  G+     VE A+   ++M  + +  + +T+N  + GL
Sbjct: 600 VAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGL 645



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 111/192 (57%), Gaps = 1/192 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNTVT+NT I GLC  G V+ A  LF QM+    +P++ TYN ++ GL   N   EA 
Sbjct: 455 CPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEAL 514

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM ++G++ ++VT+N I    C  GK +EA +LL  M+   V+P+A TY+TL   +
Sbjct: 515 ELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAY 574

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVS-YNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           C+ GK+  A +L   + + G    +V+ Y  L+ G C    VEEA+    +M+++GI   
Sbjct: 575 CMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLN 634

Query: 191 VVTYNTLFLGLF 202
             T+N L  GLF
Sbjct: 635 AATWNALVRGLF 646



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 102/249 (40%), Gaps = 42/249 (16%)

Query: 153 KHDDVSYNIL-----------------------------------INGYCKNKEVEEALS 177
           +H  ++Y I+                                   IN Y +    E+AL 
Sbjct: 76  QHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALK 135

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           ++  +   G +PTV  YN L   +   ++ +    ++  M+RD    +  TYN  +  LC
Sbjct: 136 MFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALC 195

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL-FRSLPRRVLVADV 296
           KN  +  A +L   +    CE D+ +Y  +I  + K G++E A EL  R  P      +V
Sbjct: 196 KNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQP------NV 249

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
             YN +I+G C + ++ +   L   M E  + PNVI + T+I     I      + +  K
Sbjct: 250 SVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAK 309

Query: 357 MKEKKVMPD 365
           M  +   P+
Sbjct: 310 MFVRGCSPN 318



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 96/223 (43%), Gaps = 30/223 (13%)

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
           SK  + T +TY  +   L     V+    L ++M+ + ++     +   I+   + G   
Sbjct: 72  SKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAE 131

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           +A+++F  +    C+  ++ YN L+D +    R ++   ++ ++ R     +V TYNI++
Sbjct: 132 QALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILL 191

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT--------------------------- 336
             LC + ++D A  L ++M      P+V+ + T                           
Sbjct: 192 KALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSV 251

Query: 337 ---LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              LI+GF R  K  +V  LL +M EK + P+    S V+  L
Sbjct: 252 YNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSL 294


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 190/365 (52%), Gaps = 1/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYN ++   CK     +A  L   M+ E   P+ VTYN +I  +C   D ++A+
Sbjct: 194 CAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQAR 253

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   +  +G +P+ V +N ++   C   +  +A  +LD MV+ +  PN  T + +++  
Sbjct: 254 ELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTL 313

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + +       M   GC  + V+YN +I+G C+   V+ AL L   M S G KP +
Sbjct: 314 CRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDI 373

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYNT+  GL    + E A +L  +M ++D   D ST+NT I   C+ G I++A E+F+ 
Sbjct: 374 VTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQ 433

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  +   Y+ +I GL K+G++E ALEL   +  +    D + Y ++   L  + +
Sbjct: 434 MPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDK 492

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++   +   ++++ ++P  +++ T++ G  R  K    I++L  M     MPD S   +
Sbjct: 493 IEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYII 552

Query: 372 VVDLL 376
           +++ L
Sbjct: 553 LIEGL 557



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 170/352 (48%), Gaps = 2/352 (0%)

Query: 11  VCKP--NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
            C P     TY  ++DG C+ G ++ A+ +   M           +N LIH LC      
Sbjct: 121 ACGPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVA 180

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  +   M+ +G  P VVT+N+++   CK     +A  L+D M      PN  TY+ ++
Sbjct: 181 DALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVII 240

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           D  C  G +++A EL  S+ S GCK + V+YN ++ G+C  +   +A  +  EMV +   
Sbjct: 241 DAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCP 300

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P   T N +   L     ++      E+M +    A+  TYN  I G+C+ G +  A+EL
Sbjct: 301 PNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALEL 360

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +    C+ DI  YN ++ GLC + R E A EL   + +   + D  T+N +I   C 
Sbjct: 361 LSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQ 420

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            G + +A ++F  M E    PN   + T+I G  +  K  + +ELL++M  K
Sbjct: 421 KGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANK 472



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 182/363 (50%), Gaps = 9/363 (2%)

Query: 14  PNTVTYNTIIDGLCKEGF-VDKAKALFLQMKGENINPDV--VTYNSLIHGLCHANDWNEA 70
           P+    N ++  LC+ G   D A+ +      E   P+    TY +L+ G C A    +A
Sbjct: 94  PDVPLANRLVRDLCRRGRPADAARVV------EACGPEATAATYGALVDGYCRAGLLEDA 147

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           +R+   M       S    N ++  LC+ G++ +A  +LD M+ R   P+  TY+ L+  
Sbjct: 148 RRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQA 207

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C      +A EL   M + GC+ ++V+YN++I+  C+  +V++A  L   + S+G KP 
Sbjct: 208 ACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPN 267

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            V YNT+  G   I +   A ++ +EM R++   + +T N  I+ LC+ G + +      
Sbjct: 268 TVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLE 327

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C  ++  YN +I G+C+ G ++ ALEL  ++       D+VTYN ++ GLC+  
Sbjct: 328 KMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSAD 387

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           + + A +L + M +N   P+   F T+I  + +     +  E+  +M EK   P+++  S
Sbjct: 388 RWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYS 447

Query: 371 MVV 373
            ++
Sbjct: 448 TII 450



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 148/289 (51%), Gaps = 1/289 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T N II+ LC++G + K      +M       +VVTYN++I G+C   + + A 
Sbjct: 299 CPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSAL 358

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M   G +P +VT+N ++  LC   + ++A  L+  M Q D  P+  T++T++  +
Sbjct: 359 ELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFW 418

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I +A E+F  M   GC  +  +Y+ +I G  K  ++E+AL L  EM +KG   T 
Sbjct: 419 CQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFN-TD 477

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y  L   L +  ++E  +++  ++Q   ++  T  YNT + GLC+NG    A+++   
Sbjct: 478 KMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLAD 537

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
           +    C  D   Y  LI+GL   G  + A EL   L  R ++++ +  N
Sbjct: 538 MVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDVLSNSLIKN 586



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 104/257 (40%), Gaps = 69/257 (26%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N VTYN +I G+C++G VD A  L   M+     PD+VTYN+++ GLC A+ W +A+
Sbjct: 334 CTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAE 393

Query: 72  RL-----------------------------------FFEMMDQGVQPSVVTFNVIMDEL 96
            L                                   F +M ++G  P+  T++ I+  L
Sbjct: 394 ELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGL 453

Query: 97  CKNGKMDEASRLLDLMVQRD----------------------------------VRPNAF 122
            K GKM++A  LL+ M  +                                   + P   
Sbjct: 454 TKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTV 513

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
            Y+T++ G C  GK + A ++   M S GC  D+ +Y ILI G       +EA  L   +
Sbjct: 514 LYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRL 573

Query: 183 VSKGIKPTVVTYNTLFL 199
            S+ +    +  N   L
Sbjct: 574 CSRDVLSNSLIKNEALL 590



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 108/243 (44%), Gaps = 8/243 (3%)

Query: 135 GKINRAEELFGSMESMGCKHDDVSY-NILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           G ++ A  L GS      +  DV   N L+   C+     +A    R + + G + T  T
Sbjct: 78  GDLDAALRLVGSSP----RPPDVPLANRLVRDLCRRGRPADAA---RVVEACGPEATAAT 130

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G      +E A ++   M     A+    +N  I  LC+ G + +A+ +   + 
Sbjct: 131 YGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGML 190

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D+  YN L+   CK      ALEL   +       + VTYN++I  +C +G +D
Sbjct: 191 CRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVD 250

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A +L   +      PN + + T++ GF  I +     E+L +M  +   P+ + +++++
Sbjct: 251 QARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVII 310

Query: 374 DLL 376
           + L
Sbjct: 311 NTL 313


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 183/369 (49%), Gaps = 6/369 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   +N+++  L + G +     LF  M+  ++ PDVVTY  L++GLC +    +A ++
Sbjct: 129 PDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKV 188

Query: 74  FFEMMDQG--VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ--RDVRPNAFTYSTLMD 129
              M   G  V P +   N ++D LCK G++ +A   +D  ++      PNA TY+ L D
Sbjct: 189 LDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLAD 248

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE--MVSKGI 187
            FC  G I  A ++   ME  G   + ++ N +I G C+   V  AL  +RE   V    
Sbjct: 249 AFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEA 308

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +   VTY+TL       + V+ A++LF EM       D   Y T I GL + G +++A  
Sbjct: 309 RGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACT 368

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
              ++     +LD +AYN LI G C+  +L  A EL   +    L  DV TYN ++ GLC
Sbjct: 369 TAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLC 428

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G      +L   M ++   P+V+ F TL+HG+ +  K  + + +   M E ++ P+  
Sbjct: 429 KAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTV 488

Query: 368 IVSMVVDLL 376
           I + ++D L
Sbjct: 489 IYNTLIDFL 497



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 175/356 (49%), Gaps = 6/356 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMK--GENINPDVVTYNSLIHGLCHANDWNEA 70
           KP+ VTY  +++GLCK G V  A  +  +M   G ++ PD+   N+++ GLC      +A
Sbjct: 163 KPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQA 222

Query: 71  KRLFFEMMD--QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
                E M    G  P+ VT+N + D  C+ G +  A +++  M +  V PN  T +T++
Sbjct: 223 IIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTII 282

Query: 129 DGFCLTGKINRAEELFGSMESMG--CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
            G C  G++  A E F    ++    + + V+Y+ L + +     V+ A+ L+ EM   G
Sbjct: 283 GGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHG 342

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            +P  V Y T+  GL +  ++  A      M++     D   YN  I G C+   + EA 
Sbjct: 343 HRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAY 402

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           EL   +  +  + D+  YN L+ GLCK+G      EL   +        VVT+  ++HG 
Sbjct: 403 ELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGY 462

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           C  G+ D+A  +F  M+E  + PN +I+ TLI    +  +    I+L  +M+EK V
Sbjct: 463 CKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNV 518



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 173/353 (49%), Gaps = 6/353 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYN + D  C+ G +  A  +  +M+ E + P+V+T N++I GLC       A 
Sbjct: 236 CAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAAL 295

Query: 72  RLFFEMMDQGVQP----SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             F E   + V P    + VT++ +         +D A  L   M     RP+A  Y T+
Sbjct: 296 EFFRE--KRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTM 353

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G    G++  A     SM+  G K D  +YNILI G+C+ K++ EA  L  EM   G+
Sbjct: 354 ISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGL 413

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P V TYNTL  GL +        +L   M  D       T+ T + G CK G   EA+ 
Sbjct: 414 QPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALR 473

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +FR++   + + +   YN LID LCKS  +++A++LF  +  + + A+V TYN ++ GL 
Sbjct: 474 IFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQ 533

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +    +KA +L   M E    PN +    L+     I +  ++   + +  +K
Sbjct: 534 DKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETERLKCFMQQRDQK 586



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN---PDVVTYNSLIHGLCHANDW 67
           VC P+    NT++DGLCK G + +A  +F+  +  +++   P+ VTYN L    C   D 
Sbjct: 199 VC-PDIAILNTVVDGLCKIGRLQQA-IIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDI 256

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL--DLMVQRDVRPNAFTYS 125
             A ++   M  +GV P+V+T N I+  LC+ G++  A         V  + R NA TYS
Sbjct: 257 GMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYS 316

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL   F     ++ A ELF  M   G + D V Y  +I+G  +   + +A +    M   
Sbjct: 317 TLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKA 376

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G K     YN L  G     ++  A +L EEM+   +  D  TYNT + GLCK G     
Sbjct: 377 GFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAV 436

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            EL   +    C+  +  +  L+ G CK+G+ + AL +FRS+    +  + V YN +I  
Sbjct: 437 DELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDF 496

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC   ++D A  LF +M E  V  NV  +  L+ G        K  EL+ +M+E++  P+
Sbjct: 497 LCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPN 556

Query: 366 ASIVSMVVDLL 376
              V ++++ L
Sbjct: 557 YVTVDVLMEWL 567



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 10/279 (3%)

Query: 103 DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
           + A  L D +      P+   +++L+      G +    ELF SM     K D V+Y IL
Sbjct: 113 EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGIL 172

Query: 163 INGYCKNKEVEEALSLYREMVSKG--IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR- 219
           +NG CK+  V +AL +   M S G  + P +   NT+  GL +I +++ A+   +E  R 
Sbjct: 173 LNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRH 232

Query: 220 -DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
               A +  TYN   D  C+ G I  A ++   +       ++   N +I GLC+ GR+ 
Sbjct: 233 VHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVG 292

Query: 279 IALELFRSLPRRVLV----ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            ALE FR   +R +      + VTY+ +     +   +D A +LF +M ++   P+ +++
Sbjct: 293 AALEFFRE--KRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMY 350

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            T+I G  +  +          MK+     DA   ++++
Sbjct: 351 FTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILI 389



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 88/166 (53%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GV  +P+  TYNT++ GLCK G       L   M  +   P VVT+ +L+HG C A   +
Sbjct: 410 GVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTD 469

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA R+F  M +  +QP+ V +N ++D LCK+ ++D A +L D M +++V  N  TY+ L+
Sbjct: 470 EALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALL 529

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
            G        +A EL   M    C  + V+ ++L+    +  E E 
Sbjct: 530 KGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETER 575



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/108 (40%), Positives = 62/108 (57%), Gaps = 3/108 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PNTV YNT+ID LCK   VD A  LF +M+ +N+  +V TYN+L+ GL       +A  
Sbjct: 484 QPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFE 543

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           L   M ++   P+ VT +V+M+ L + G   E  RL   M QRD + N
Sbjct: 544 LMDRMREERCTPNYVTVDVLMEWLPEIG---ETERLKCFMQQRDQKDN 588



 Score = 42.0 bits (97), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 2/105 (1%)

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           S   E A  L  SL       D+  +N ++  L   G +    +LF  M + +V P+V+ 
Sbjct: 109 SSPAEAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVT 168

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKE--KKVMPDASIVSMVVDLL 376
           +  L++G  +       +++L +M      V PD +I++ VVD L
Sbjct: 169 YGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGL 213


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 197/397 (49%), Gaps = 35/397 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+   YN +I G CK   ++ A  +  +MK     PD+VTYN +I  LC+      A +
Sbjct: 134 EPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALK 193

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +++     P+V+T+ ++++     G ++EA +LL+ M+ R + P+ +TY+ ++ G C
Sbjct: 194 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 253

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G + RA EL  S+ S GCK D +SYNIL+  +    + +E   L  EM S+G +P  V
Sbjct: 254 KEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKV 313

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST------------------------ 228
           TY+ L   L    +++ A+ + + M   ++  DT +                        
Sbjct: 314 TYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYM 373

Query: 229 -----------YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
                      YNT +  LCKNG   +A+E+F  L  + C  ++ +YN +I  L   G  
Sbjct: 374 ISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDR 433

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             AL +  ++  + +  D +TYN +I  LC DG +++A  L  DME++   P VI +  +
Sbjct: 434 SRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIV 493

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + G  ++ +    I +  +M EK   P+ +   ++++
Sbjct: 494 LLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIE 530



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 172/356 (48%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  +TY  +I+    EG +++A  L  +M    + PD+ TYN++I G+C       A 
Sbjct: 203 CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAA 262

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   +  +G +P V+++N+++      GK DE  +L+  M  R   PN  TYS L+   
Sbjct: 263 ELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSL 322

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+I+ A  +   M       D  SY+ LI+  CK   ++ A+ +   M+S G  P +
Sbjct: 323 CRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 382

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YNT+   L +      AL++F +++      + S+YNT I  L   G    A+ +   
Sbjct: 383 VNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPA 442

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D   YN LI  LC+ G +E A+ L   + +      V++YNI++ GLC   +
Sbjct: 443 MISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRR 502

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           +D A  +F +M E    PN   ++ LI G       ++ +EL + +  + V+   S
Sbjct: 503 IDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDS 558



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 172/352 (48%), Gaps = 1/352 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +    +I G      ++KA  + +++   +  PDV  YN++I G C  N    A ++
Sbjct: 101 PDVILCTKLIKGFFNFKNIEKASRV-MEILESHTEPDVFAYNAVISGFCKVNRIEAATQV 159

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +G  P +VT+N+++  LC   K+  A ++LD ++  +  P   TY+ L++   +
Sbjct: 160 LNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIV 219

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G IN A +L   M + G   D  +YN +I G CK   VE A  L   + SKG KP V++
Sbjct: 220 EGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVIS 279

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L        + +   KL  EM       +  TY+  I  LC+ G I EA+ + + + 
Sbjct: 280 YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI 339

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +   D  +Y+ LI  LCK GRL++A+ +   +     + D+V YN ++  LC +G  +
Sbjct: 340 EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNAN 399

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A ++F  +      PNV  + T+I         S+ + ++  M  K V PD
Sbjct: 400 QALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPD 451



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 165/355 (46%), Gaps = 36/355 (10%)

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
           L++  C A  +NE+      ++++G  P V+    ++        +++ASR+++++ +  
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEIL-ESH 132

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
             P+ F Y+ ++ GFC   +I  A ++   M++ G   D V+YNI+I   C  +++  AL
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            +  +++     PTV+TY  L         +  A+KL EEM    +  D  TYN  I G+
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYN------------------------------- 265
           CK G +  A EL  +L    C+ D+ +YN                               
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312

Query: 266 ----CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
                LI  LC+ GR++ A+ + + +  + L  D  +Y+ +I  LC +G++D A  +   
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           M  N   P+++ + T++    +    ++ +E+ +K++     P+ S  + ++  L
Sbjct: 373 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 427



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 77/141 (54%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G+ C PN  +YNT+I  L   G   +A  +   M  + ++PD +TYNSLI  LC      
Sbjct: 410 GMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVE 469

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  L  +M   G +P+V+++N+++  LCK  ++D+A  +   M+++  RPN  TY  L+
Sbjct: 470 EAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLI 529

Query: 129 DGFCLTGKINRAEELFGSMES 149
           +G    G    A EL  S+ S
Sbjct: 530 EGIGFAGWRTEAMELANSLFS 550


>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
 gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 189/357 (52%), Gaps = 1/357 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TYN ++  LC+ G  D    +F  M  +   PD      L+  +  A+D++  K+L  E+
Sbjct: 75  TYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEV 134

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
             + V+ +   +N ++  L K  ++ EA  L    +     P+ +T++ L+ G C  G +
Sbjct: 135 QGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGV 194

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-IKPTVVTYNT 196
           +RA E+F  MES GC  D V+YN LING CK  EV+    L++E+ S+    P +VTY +
Sbjct: 195 DRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTS 254

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  G  +  +++ A  LFEEM R  +  +  T+N  IDG  K G I EA  ++R +    
Sbjct: 255 IISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFD 314

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
           C  D+  +  LIDG C++G++   L+ +  +  R +   V TY ++I+ LC + ++++A 
Sbjct: 315 CSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEAR 374

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           D    ++ +++ P   ++  +I GF +     +   +L +M+EK+  PD    ++++
Sbjct: 375 DFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILI 431



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 162/306 (52%), Gaps = 1/306 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T T+N +I GLC+ G VD+A  +F  M+     PDVVTYN+LI+GLC AN+      L
Sbjct: 176 PDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCEL 235

Query: 74  FFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           F E+  +    P +VT+  I+   CK+GKM EAS L + M++  ++PN  T++ L+DGF 
Sbjct: 236 FKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFG 295

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G I  AE ++  M    C  D V++  LI+GYC+  +V   L  +  M ++ + PTV 
Sbjct: 296 KIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVY 355

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L   L + +++  A     +++   +      YN  IDG CK G + E   + + +
Sbjct: 356 TYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEM 415

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +C+ D   +  LI G C  GR+  A+ +F  +       D +T N +I  L   G  
Sbjct: 416 EEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMP 475

Query: 313 DKAHDL 318
           ++A+ +
Sbjct: 476 NEAYRI 481



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 181/364 (49%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P++     ++  + +    D  K L  +++G+ +  +   YN+L+  L   N  +EA  L
Sbjct: 106 PDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYL 165

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E +     P   TFN+++  LC+ G +D A  +   M      P+  TY+TL++G C 
Sbjct: 166 FKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCK 225

Query: 134 TGKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             ++ R  ELF  ++S   C  D V+Y  +I+G+CK+ +++EA +L+ EM+  GI+P V+
Sbjct: 226 ANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVI 285

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N L  G  +I  +  A  ++ +M   D +AD  T+ + IDG C+ G +   ++ +  +
Sbjct: 286 TFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVM 345

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   +  Y  LI+ LCK  RL  A +    +    ++     YN +I G C  G +
Sbjct: 346 KTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNV 405

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+ + +  +MEE    P+ + F  LI G     +  + I + ++M   +  PD   V+ +
Sbjct: 406 DEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSL 465

Query: 373 VDLL 376
           +  L
Sbjct: 466 ISCL 469



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 174/343 (50%), Gaps = 7/343 (2%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N+  YN ++  L K+  V +A  LF +       PD  T+N LI GLC     + A  +F
Sbjct: 142 NSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVF 201

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDVRPNAFTYSTLMDGFCL 133
            +M   G  P VVT+N +++ LCK  ++     L  ++  + D  P+  TY++++ GFC 
Sbjct: 202 KDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCK 261

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +GK+  A  LF  M   G + + +++N+LI+G+ K   + EA ++YR+M        VVT
Sbjct: 262 SGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVT 321

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           + +L  G     QV H LK +  M+  +V+    TY   I+ LCK   + EA +    LG
Sbjct: 322 FTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDF---LG 378

Query: 254 ILKCELDIQA---YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +K    I     YN +IDG CK+G ++    + + +  +    D VT+ I+I G C  G
Sbjct: 379 QIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKG 438

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
           +M +A ++F  M     AP+ I   +LI   ++   P++   +
Sbjct: 439 RMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRI 481



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 137/265 (51%), Gaps = 1/265 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEA 70
           C P+ VTYNT+I+GLCK   V +   LF +++   + +PD+VTY S+I G C +    EA
Sbjct: 209 CLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEA 268

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             LF EMM  G+QP+V+TFNV++D   K G + EA  +   M   D   +  T+++L+DG
Sbjct: 269 SNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDG 328

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +C  G++N   + +  M++        +Y +LIN  CK   + EA     ++ +  I P 
Sbjct: 329 YCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPK 388

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
              YN +  G  +   V+    + +EM+      D  T+   I G C  G + EA+ +F 
Sbjct: 389 PFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFN 448

Query: 251 TLGILKCELDIQAYNCLIDGLCKSG 275
            +   +C  D    N LI  L K+G
Sbjct: 449 RMLATRCAPDNITVNSLISCLLKAG 473



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 164/330 (49%), Gaps = 1/330 (0%)

Query: 46  NINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA 105
           N+N    TYN L+  LC     +    +F  M   G  P       ++  + +    D  
Sbjct: 68  NVNHCYSTYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMV 127

Query: 106 SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILING 165
            +LL  +  ++VR N+F Y+ L+       +++ A  LF     M    D  ++NILI G
Sbjct: 128 KKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRG 187

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ-RDDVAA 224
            C+   V+ A  ++++M S G  P VVTYNTL  GL + ++V+   +LF+E+Q R D + 
Sbjct: 188 LCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSP 247

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           D  TY + I G CK+G + EA  LF  +     + ++  +N LIDG  K G +  A  ++
Sbjct: 248 DIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMY 307

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
           R +      ADVVT+  +I G C  GQ++     +  M+   V+P V  +  LI+   + 
Sbjct: 308 RKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKE 367

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           N+ ++  + L ++K   ++P   + + V+D
Sbjct: 368 NRLNEARDFLGQIKNSSIIPKPFMYNPVID 397



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 149/307 (48%), Gaps = 1/307 (0%)

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           K L F  ++  V     T+N++M  LC+ G  D  + + D M      P++     L+  
Sbjct: 58  KFLEFSRLNLNVNHCYSTYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTW 117

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
                  +  ++L   ++    + +   YN L++   K  +V EA+ L++E +     P 
Sbjct: 118 MAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPD 177

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             T+N L  GL  +  V+ A ++F++M+      D  TYNT I+GLCK   +    ELF+
Sbjct: 178 TWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFK 237

Query: 251 TLGILK-CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
            +     C  DI  Y  +I G CKSG+++ A  LF  + R  +  +V+T+N++I G    
Sbjct: 238 EIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKI 297

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G + +A  ++  M     + +V+ F +LI G+ R  + +  ++  + MK + V P     
Sbjct: 298 GNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTY 357

Query: 370 SMVVDLL 376
           +++++ L
Sbjct: 358 AVLINAL 364



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 120/237 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY +II G CK G + +A  LF +M    I P+V+T+N LI G     +  EA+
Sbjct: 245 CSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAE 304

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            ++ +M        VVTF  ++D  C+ G+++   +  ++M  R+V P  +TY+ L++  
Sbjct: 305 AMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINAL 364

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++N A +  G +++         YN +I+G+CK   V+E   + +EM  K   P  
Sbjct: 365 CKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDK 424

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           VT+  L +G     ++  A+ +F  M     A D  T N+ I  L K G   EA  +
Sbjct: 425 VTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRI 481



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 51/101 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    YN +IDG CK G VD+   +  +M+ +  +PD VT+  LI G C      EA  +
Sbjct: 387 PKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINI 446

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
           F  M+     P  +T N ++  L K G  +EA R+  + ++
Sbjct: 447 FNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALE 487


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 182/364 (50%), Gaps = 1/364 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P T T N ++ G C+ G + KA  LFL M       +  +Y  LI GLC A    +A  
Sbjct: 100 EPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALV 159

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M   G  P+V  F  ++  LCK+G++ +A  L D M Q  V P+  TY+ ++ G+ 
Sbjct: 160 LFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYS 219

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++N A ++   ME  GC  DD +YN LI G C  K  EEA  L    V +G  PTVV
Sbjct: 220 KLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVV 278

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+  L  G     + + AL++  +M       D   +   I+ L K   + EA EL   +
Sbjct: 279 TFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI 338

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++  Y  +IDG CKSG+++IALE+ + + R     +  TYN +++GL  D ++
Sbjct: 339 SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKL 398

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            KA  L   M+++ + PNVI + TL+ G    +       L   M++  + PD    +++
Sbjct: 399 HKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVL 458

Query: 373 VDLL 376
            D L
Sbjct: 459 TDAL 462



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 185/363 (50%), Gaps = 4/363 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TYNT+I GLC +   ++A+ L      E   P VVT+ +LI+G C A  +++A 
Sbjct: 239 CHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDAL 297

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R+  +MM    +  +  F  +++ L K  ++ EA  LL+ +    + PN  TY++++DG+
Sbjct: 298 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGY 357

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +GK++ A E+   ME  GC+ +  +YN L+ G  K+K++ +A++L  +M   GI P V
Sbjct: 358 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 417

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY TL  G  + H  ++A +LFE M+++ +  D   Y    D LCK G   EA      
Sbjct: 418 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR 477

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
            G+    L    Y  LIDG  K+G  + A  L   +       D  TY++++H LC   +
Sbjct: 478 KGV---ALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 534

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A  +   M    +   +  +  LI   +R  K      + ++M      P A+  ++
Sbjct: 535 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTV 594

Query: 372 VVD 374
            ++
Sbjct: 595 FIN 597



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 195/397 (49%), Gaps = 33/397 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N  +Y  +I GLC    V KA  LFL MK +  +P+V  +  LI GLC +    +A+
Sbjct: 134 CQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 193

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M   GV PSV+T+N ++    K G+M++A ++ +LM +    P+ +TY+TL+ G 
Sbjct: 194 LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 253

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K   AEEL  +    G     V++  LINGYC  ++ ++AL +  +M+S   K  +
Sbjct: 254 C-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDL 312

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             +  L   L +  +++ A +L  E+  + +  +  TY + IDG CK+G +  A+E+ + 
Sbjct: 313 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 372

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ +   YN L+ GL K  +L  A+ L   + +  ++ +V+TY  ++ G C++  
Sbjct: 373 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 432

Query: 312 MDKAHDLFLDMEENAVAPN--------------------------------VIIFVTLIH 339
            D A  LF  ME+N + P+                                 + + TLI 
Sbjct: 433 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLID 492

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           GF +         L+ +M ++   PD+   S+++  L
Sbjct: 493 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHAL 529



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 189/379 (49%), Gaps = 21/379 (5%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN  TYN+++ GL K+  + KA AL  +M+ + I P+V+TY +L+ G C  +D++ A 
Sbjct: 378 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 437

Query: 72  RLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           RLF EMM+Q G++P    + V+ D LCK G+ +EA      +V++ V      Y+TL+DG
Sbjct: 438 RLF-EMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDG 493

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           F   G  + A  L   M   GC  D  +Y++L++  CK K + EAL +  +M  +GIK T
Sbjct: 494 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 553

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           +  Y  L   +    + +HA +++ EM         +TY  FI+  CK G + +A +L  
Sbjct: 554 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 613

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH------ 304
            +       D+  YN LIDG    G ++ A    + +       +  TY +++       
Sbjct: 614 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 673

Query: 305 ----------GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
                     G+ N  ++D    L   M ++ + P V  + +LI GF +  +  +   LL
Sbjct: 674 LAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLL 733

Query: 355 HKMKEKKVMPDASIVSMVV 373
             M  K + P+  I ++++
Sbjct: 734 DHMCGKGLSPNEDIYTLLI 752



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 189/381 (49%), Gaps = 34/381 (8%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           YN  +  L +    +    ++ Q+  + + PD VTYN++I   C   D   A R F  ++
Sbjct: 36  YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 95

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           + G++P   T N ++   C+ G++ +A  L  +M     + N ++Y+ L+ G C    + 
Sbjct: 96  EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 155

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
           +A  LF  M+  GC  +  ++  LI+G CK+  V +A  L+  M   G+ P+V+TYN + 
Sbjct: 156 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 215

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK-------------------- 238
           +G  ++ ++  ALK+ E M+++    D  TYNT I GLC                     
Sbjct: 216 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTP 275

Query: 239 ---------NGYIV-----EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
                    NGY +     +A+ +   +   KC+LD+Q +  LI+ L K  RL+ A EL 
Sbjct: 276 TVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELL 335

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
             +    LV +V+TY  +I G C  G++D A ++   ME +   PN   + +L++G V+ 
Sbjct: 336 NEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKD 395

Query: 345 NKPSKVIELLHKMKEKKVMPD 365
            K  K + LL KM++  ++P+
Sbjct: 396 KKLHKAMALLTKMQKDGIIPN 416



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 170/354 (48%), Gaps = 3/354 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CK +   +  +I+ L K+  + +AK L  ++    + P+V+TY S+I G C +   + A 
Sbjct: 308 CKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIAL 367

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   M   G QP+  T+N +M  L K+ K+ +A  LL  M +  + PN  TY+TL+ G 
Sbjct: 368 EVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQ 427

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C     + A  LF  ME  G K D+ +Y +L +  CK    EEA S    +V KG+  T 
Sbjct: 428 CDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTK 484

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V Y TL  G  +    + A  L E M  +    D+ TY+  +  LCK   + EA+ +   
Sbjct: 485 VYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQ 544

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +   +  I AY  LID + + G+ + A  ++  +          TY + I+  C +G+
Sbjct: 545 MSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGR 604

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++ A DL L ME   VAP+V+ +  LI G   +    +    L +M      P+
Sbjct: 605 LEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 658



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 172/374 (45%), Gaps = 16/374 (4%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V Y T+IDG  K G  D A  L  +M  E   PD  TY+ L+H LC     NEA  +  +
Sbjct: 485 VYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQ 544

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M  +G++ ++  + +++DE+ + GK D A R+ + M     +P+A TY+  ++ +C  G+
Sbjct: 545 MSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGR 604

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +  AE+L   ME  G   D V+YNILI+G      ++ A S  + MV    +P   TY  
Sbjct: 605 LEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCL 664

Query: 197 LF----------------LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           L                  G++ + +++   +L E M +  +    +TY++ I G CK G
Sbjct: 665 LLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAG 724

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            + EA  L   +       +   Y  LI   C +   E AL     +        + +Y 
Sbjct: 725 RLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYR 784

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +++ GLCN+G  +K   LF D+ E     + + +  L  G ++        ++L  M+++
Sbjct: 785 LLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 844

Query: 361 KVMPDASIVSMVVD 374
                +   ++V +
Sbjct: 845 YCCISSQTYALVTN 858



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 145/329 (44%), Gaps = 16/329 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P++ TY+ ++  LCK+  +++A  +  QM    I   +  Y  LI  +      + AK
Sbjct: 515 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 574

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R++ EM   G +PS  T+ V ++  CK G++++A  L+  M +  V P+  TY+ L+DG 
Sbjct: 575 RMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGC 634

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK----------------EVEEA 175
              G I+RA      M    C+ +  +Y +L+    K                  E++  
Sbjct: 635 GHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDIT 694

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
             L   MV  G+ PTV TY++L  G  +  ++E A  L + M    ++ +   Y   I  
Sbjct: 695 WQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKC 754

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
            C   +  +A+     +     +  +++Y  L+ GLC  G  E    LF  L       D
Sbjct: 755 CCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHD 814

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
            V + I+  GL   G +D    +   ME+
Sbjct: 815 EVAWKILNDGLLKAGYVDICFQMLSIMEK 843



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 120/268 (44%), Gaps = 16/268 (5%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY   I+  CKEG ++ A+ L L+M+ E + PDVVTYN LI G  H    + A  
Sbjct: 586 KPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFS 645

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNG----------------KMDEASRLLDLMVQRD 116
               M+    +P+  T+ +++  L K                  ++D   +LL+ MV+  
Sbjct: 646 TLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHG 705

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           + P   TYS+L+ GFC  G++  A  L   M   G   ++  Y +LI   C  K  E+AL
Sbjct: 706 LNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKAL 765

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           S    M   G +P + +Y  L +GL      E    LF ++       D   +    DGL
Sbjct: 766 SFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGL 825

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAY 264
            K GY+    ++   +    C +  Q Y
Sbjct: 826 LKAGYVDICFQMLSIMEKRYCCISSQTY 853



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 4/193 (2%)

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           +A+   R   S  +  +   YN     L      E+  +++ ++ +D +  DT TYNT I
Sbjct: 16  DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 75

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNC--LIDGLCKSGRLEIALELFRSLPRRV 291
              CK G +  A   FR L  L+  L+ + + C  L+ G C++G L  A  LF  +P   
Sbjct: 76  KSYCKEGDLTTAHRYFRLL--LEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 133

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
              +  +Y I+I GLC+   + KA  LFL M+ +  +PNV  F  LI G  +  +     
Sbjct: 134 CQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 193

Query: 352 ELLHKMKEKKVMP 364
            L   M +  V+P
Sbjct: 194 LLFDAMPQNGVVP 206



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 3/163 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TY+++I G CK G +++A  L   M G+ ++P+   Y  LI   C    + +A   
Sbjct: 708 PTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSF 767

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M + G QP + ++ +++  LC  G  ++   L   +++     +   +  L DG   
Sbjct: 768 VSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLK 827

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
            G ++   ++   ME   C     +Y ++ N   K  EV  +L
Sbjct: 828 AGYVDICFQMLSIMEKRYCCISSQTYALVTN---KMHEVSSSL 867


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/377 (32%), Positives = 196/377 (51%), Gaps = 5/377 (1%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           + N  G++GVV  PN   YN++I+ LCK G +++A+ LF  M    +NP+ VTY  LI G
Sbjct: 352 LLNKVGKLGVV--PNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDG 409

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
                  + A   F +M++ G+  +V ++N +++  CK GKM  A  L   MV + ++P 
Sbjct: 410 FGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPT 469

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY++L+ G+C  G + +A +L+  M   G   + V++  LI G C+  ++ EA  L+ 
Sbjct: 470 VATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFD 529

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           EMV   I P  VTYN L  G         A +L +EM +  ++ DT TY   I GLC  G
Sbjct: 530 EMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTG 589

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            + EA E    L      LD   Y  L+ G CK GR++ AL   + +  R L  D+V+Y 
Sbjct: 590 RVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYA 649

Query: 301 IMIHGLCNDGQMDKA-HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           ++I G  N  Q D+   +L  +M    + P+ +I+  LI GF++     K  E  + M  
Sbjct: 650 VLISGALN--QNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIG 707

Query: 360 KKVMPDASIVSMVVDLL 376
           +  +P++   + +V+ L
Sbjct: 708 EGYVPNSVTYTALVNGL 724



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 202/444 (45%), Gaps = 78/444 (17%)

Query: 2   ANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGL 61
           A GNG     C  + VTYN  I+GLCK   V +A  +   +  + +  D+VTY +L+ GL
Sbjct: 251 AEGNG-----CSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGL 305

Query: 62  CHANDWNEAKRLF-------------------------------FEMMDQ----GVQPSV 86
           C   ++     +                                FE++++    GV P++
Sbjct: 306 CRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNL 365

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF--------------- 131
             +N +++ LCK GK++EA  L  +M +R + PN  TY+ L+DGF               
Sbjct: 366 FVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNK 425

Query: 132 --------------------CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
                               C  GK+  AE LF  M   G K    +Y  LI+GYCK+  
Sbjct: 426 MIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGL 485

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           V +A  LY EM  KGI P  VT+  L  GL +I+++  A KLF+EM    +  +  TYN 
Sbjct: 486 VPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNV 545

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            I+G C+ G    A EL   +       D   Y  LI GLC +GR+  A E    L  + 
Sbjct: 546 LIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKH 605

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
              D + Y  ++ G C +G++ +A     +M    +  +++ +  LI G   +N+  +++
Sbjct: 606 QRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISG--ALNQNDRIL 663

Query: 352 -ELLHKMKEKKVMPDASIVSMVVD 374
            ELL +M  K + PD  I ++++D
Sbjct: 664 FELLREMHGKGMQPDNVIYTILID 687



 Score =  183 bits (465), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 198/433 (45%), Gaps = 71/433 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP   TY ++I G CK+G V KA  L+ +M G+ I P+ VT+ +LI GLC  N   EA +
Sbjct: 467 KPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASK 526

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY-------- 124
           LF EM++  + P+ VT+NV+++  C+ G    A  LLD M+++ + P+ +TY        
Sbjct: 527 LFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLC 586

Query: 125 ---------------------------STLMDGFCLTGKINRAE---------------- 141
                                      + L+ GFC  G+I  A                 
Sbjct: 587 STGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLV 646

Query: 142 ------------------ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
                             EL   M   G + D+V Y ILI+G+ K+  +++A   +  M+
Sbjct: 647 SYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMI 706

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
            +G  P  VTY  L  GLF+   V  A  LF+ M   +   +  TY  F+D L K G + 
Sbjct: 707 GEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNME 766

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
            A++L   + +     +   YN LI G C+ G+ + A +L   +    +V D +TY+  I
Sbjct: 767 NALQLHNAM-LQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFI 825

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           +  C  G +D A D++  M +  + P+ ++F  LIH      +  + ++L + M  + + 
Sbjct: 826 YEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLK 885

Query: 364 PDASIV-SMVVDL 375
           P  S   S++V L
Sbjct: 886 PTQSTYHSLMVQL 898



 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 156/332 (46%), Gaps = 35/332 (10%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M D G+ P V T + +++ L +  K  +   L D +V   V+P+ + Y+ ++   C    
Sbjct: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKD 240

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
            N+A+E+    E  GC    V+YN+ ING CK+K V EA+ + R +  KG+K  +VTY T
Sbjct: 241 FNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCT 300

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L LGL  I + E  +++ +EM         +  +  I+GL K G I  A EL   +G L 
Sbjct: 301 LVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLG 360

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL---------- 306
              ++  YN +I+ LCK+G+LE A  LF  +  R L  + VTY I+I G           
Sbjct: 361 VVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAF 420

Query: 307 -------------------------CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
                                    C  G+M  A  LF +M +  + P V  + +LI G+
Sbjct: 421 YYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGY 480

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            +     K  +L H+M  K + P+    + ++
Sbjct: 481 CKDGLVPKAFKLYHEMTGKGIAPNTVTFTALI 512



 Score =  157 bits (397), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 175/361 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   T + +++ L +     +   LF  +    + PD   Y  ++  LC   D+N+AK +
Sbjct: 188 PEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEI 247

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +    G   S+VT+NV ++ LCK+ ++ EA  +   + ++ ++ +  TY TL+ G C 
Sbjct: 248 INQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCR 307

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +     E+   M  +G    + + + LI G  K   +E A  L  ++   G+ P +  
Sbjct: 308 IQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFV 367

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN++   L +  ++E A  LF  M    +  +  TY   IDG  +   +  A   F  + 
Sbjct: 368 YNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMI 427

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  + +YN +I+  CK G++++A  LF+ +  + L   V TY  +I G C DG + 
Sbjct: 428 ECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVP 487

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA  L+ +M    +APN + F  LI G  +INK ++  +L  +M E K++P+    ++++
Sbjct: 488 KAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLI 547

Query: 374 D 374
           +
Sbjct: 548 E 548



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 120/232 (51%), Gaps = 1/232 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V Y  +IDG  K G + KA   +  M GE   P+ VTY +L++GL  A   NEAK 
Sbjct: 676 QPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKL 735

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M+     P+ +T+   +D L K G M+ A +L + M+Q     N  TY+ L+ G+C
Sbjct: 736 LFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSF-ANTVTYNILIRGYC 794

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK   A +L   M  +G   D ++Y+  I  YCK   V+ A+ ++  M+ +G+KP  V
Sbjct: 795 QIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRV 854

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
            +N L        +++ AL+L  +M    +    STY++ +  L +   + +
Sbjct: 855 VFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQ 906



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 136/297 (45%), Gaps = 43/297 (14%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           Y  ++ G CKEG + +A     +M G  +  D+V+Y  LI G  + ND     R+ FE++
Sbjct: 613 YTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQND-----RILFELL 667

Query: 79  DQ----GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +    G+QP  V + +++D   K+G + +A     +M+     PN+ TY+ L++G    
Sbjct: 668 REMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKA 727

Query: 135 GKINRAEELF-------------------------GSMES---------MGCKHDDVSYN 160
           G +N A+ LF                         G+ME+          G   + V+YN
Sbjct: 728 GYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVTYN 787

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           ILI GYC+  + +EA  L   M+  G+ P  +TY+T      +   V+ A+ ++E M + 
Sbjct: 788 ILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQR 847

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
            +  D   +N  I   C NG +  A++L   + +   +     Y+ L+  L +  RL
Sbjct: 848 GLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARL 904



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 107/219 (48%)

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            +++LI  Y +NK V + + +   M   G+ P V T + L   L  I +    L+LF+ +
Sbjct: 157 GFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTL 216

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
               V  D   Y   +  LC+     +A E+        C L I  YN  I+GLCKS R+
Sbjct: 217 VNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRV 276

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A+E+ RSL  + L AD+VTY  ++ GLC   + +   ++  +M E    P+      L
Sbjct: 277 WEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGL 336

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           I G +++       ELL+K+ +  V+P+  + + +++ L
Sbjct: 337 IEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSL 375



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 146/350 (41%), Gaps = 53/350 (15%)

Query: 45  ENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDE 104
            N +    ++  LIH L   N +  A  L   ++ +G+ P  +  N    E  K  K   
Sbjct: 97  RNFHHSTASFCILIHSLLQNNLFWPASSLLQTLLLRGLNPHQIFENFF--ESYKKYKFSS 154

Query: 105 ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
           +S   D+++Q  V+        +MDG  +             M   G   +  + + L+N
Sbjct: 155 SSGF-DMLIQHYVQN-----KRVMDGVLVVN----------LMRDYGLLPEVRTLSALLN 198

Query: 165 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAA 224
              + ++  + L L+  +V+ G+KP    Y  +   L E+     A ++  + + +  + 
Sbjct: 199 ALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSL 258

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC------------ 272
              TYN FI+GLCK+  + EAVE+ R+LG    + D+  Y  L+ GLC            
Sbjct: 259 SIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMM 318

Query: 273 -----------------------KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
                                  K G +E A EL   + +  +V ++  YN MI+ LC  
Sbjct: 319 DEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKT 378

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           G++++A  LF  M E  + PN + +  LI GF R  K        +KM E
Sbjct: 379 GKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIE 428



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 55/97 (56%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           IG+   P+ +TY+T I   CK G VD A  ++  M    + PD V +N LIH  C   + 
Sbjct: 810 IGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGEL 869

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDE 104
           + A +L  +MM +G++P+  T++ +M +L +  ++ +
Sbjct: 870 DRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQ 906


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 187/359 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N VT++T +D  CKEG V +A  LF QM+   +  +  TY  LI G C A   ++A  L 
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL 351

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ QGV  +VVT+ V++D LCK  K+ EA  +L +M +  VR N   Y+TL+ G  + 
Sbjct: 352 DEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMN 411

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
               +A  L   M++ G + D   Y  LI G C   +++EA SL  +M   G++P  + Y
Sbjct: 412 KNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIY 471

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            T+    F+  +V  A+ + +++       +  TY   IDGLCK G I EA+  F  +  
Sbjct: 472 TTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRD 531

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L  + ++QAY  L+DGLCK+G L  A++LF  +  + +  D V Y  ++ G    G +  
Sbjct: 532 LGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHD 591

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A  L   M ++ +  ++  +   I GF  +N   +  E+  +M    + PD ++ + ++
Sbjct: 592 AFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/361 (32%), Positives = 183/361 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T+N +ID LCKEG + +A++LF +MK     PDVVT+NSLI G     + +E ++L
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G +  VVT+N +++  CK G+M+ A      M +  V  N  T+ST +D FC 
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A +LF  M   G   ++ +Y  LI+G CK   +++A+ L  EMV +G+   VVT
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +  +V  A  +   M++  V A+   Y T I G   N    +A+ L   + 
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               ELDI  Y  LI GLC   +L+ A  L   +    L  + + Y  M+      G++ 
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  +   + ++   PNVI +  LI G  +     + I   +KM++  + P+    + +V
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545

Query: 374 D 374
           D
Sbjct: 546 D 546



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 187/346 (54%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CK + VTYN +I+  CK G ++ A   F  MK E +  +VVT+++ +   C      EA 
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +LF +M  +G+  +  T+  ++D  CK G++D+A  LLD MV++ V  N  TY+ L+DG 
Sbjct: 314 KLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGL 373

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K+  AE++   ME  G + +++ Y  LI+G+  NK  E+AL L  EM +KG++  +
Sbjct: 374 CKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDI 433

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y  L  GL  +H+++ A  L  +M    +  +   Y T +D   K+G + EA+ + + 
Sbjct: 434 SLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQK 493

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + ++  Y  LIDGLCK+G ++ A+  F  +    L  +V  Y  ++ GLC +G 
Sbjct: 494 ILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGC 553

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           +++A  LF +M    ++ + +++  L+ G+++         L  KM
Sbjct: 554 LNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKM 599



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 183/363 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT+N++IDG  K G +D+ + L  +M+      DVVTYN+LI+  C       A 
Sbjct: 219 CLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAY 278

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             F  M  +GV  +VVTF+  +D  CK G + EA +L   M  R +  N FTY+ L+DG 
Sbjct: 279 GYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGT 338

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A  L   M   G   + V+Y +L++G CK ++V EA  + R M   G++   
Sbjct: 339 CKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANE 398

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           + Y TL  G F     E AL L  EM+   +  D S Y   I GLC    + EA  L   
Sbjct: 399 LLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTK 458

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     E +   Y  ++D   KSG++  A+ + + +       +V+TY  +I GLC  G 
Sbjct: 459 MDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGS 518

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A   F  M +  + PNV  +  L+ G  +    ++ ++L ++M  K +  D  + + 
Sbjct: 519 IDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTA 578

Query: 372 VVD 374
           ++D
Sbjct: 579 LLD 581



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 107/319 (33%), Positives = 174/319 (54%), Gaps = 4/319 (1%)

Query: 55  NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
           ++L+  L      ++A R    + +  V P+  T N I+  L +    D + RL+  + +
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLAR----DRSGRLVRRLFE 181

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
           +   PN FT++ ++D  C  G++  A  LF  M+ MGC  D V++N LI+GY K  E++E
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
              L  EM   G K  VVTYN L     +  ++E A   F  M+R+ V A+  T++TF+D
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
             CK G + EA++LF  + +    L+   Y CLIDG CK+GRL+ A+ L   + R+ +  
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           +VVTY +++ GLC + ++ +A D+   ME+  V  N +++ TLIHG        K + LL
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421

Query: 355 HKMKEKKVMPDASIVSMVV 373
            +MK K +  D S+   ++
Sbjct: 422 SEMKNKGLELDISLYGALI 440



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 183/390 (46%), Gaps = 39/390 (10%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           +T++  L   G +D A     +++   + P+  T N ++  L         +RLF    +
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLF----E 181

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
           Q   P+V TFN+++D LCK G++ EA  L   M +    P+  T+++L+DG+   G+++ 
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
            E+L   M   GCK D V+YN LIN +CK   +E A   +  M  +G+   VVT++T   
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
              +   V  A+KLF +M+   +A +  TY   IDG CK G + +A+ L   +      L
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 260 DIQAYNCLIDGLCKSGRL-----------------------------------EIALELF 284
           ++  Y  L+DGLCK  ++                                   E AL L 
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
             +  + L  D+  Y  +I GLCN  ++D+A  L   M+E+ + PN II+ T++    + 
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            K  + I +L K+ +    P+      ++D
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNVITYCALID 511



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 138/280 (49%), Gaps = 4/280 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + N + Y T+I G       +KA  L  +MK + +  D+  Y +LI GLC+ +  +EAK 
Sbjct: 395 RANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKS 454

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M + G++P+ + +  +MD   K+GK+ EA  +L  ++    +PN  TY  L+DG C
Sbjct: 455 LLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLC 514

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G I+ A   F  M  +G   +  +Y  L++G CKN  + EA+ L+ EMV KG+    V
Sbjct: 515 KAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKV 574

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y  L  G  +   +  A  L  +M    +  D   Y  FI G C    + EA E+F  +
Sbjct: 575 VYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 634

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIAL----ELFRSLP 288
                  D   YNCLI    K G LE A+    E+ R LP
Sbjct: 635 IGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLP 674


>gi|307136214|gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 653

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/360 (34%), Positives = 191/360 (53%), Gaps = 7/360 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G    PN VTYN II+G CK   ++ AK +  +M    I+ +  TY  LI G       +
Sbjct: 280 GGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDSNERTYAPLIDGYARKGSLD 339

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A RL  EM++  + P  V +N ++  L   G+++EAS LL  M+ R + P+ FTYS L 
Sbjct: 340 VAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDMINRRILPDEFTYSILT 399

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G CL+G +N+A  +   +       D  ++NILIN   +++ +  A  L   M+ +GIK
Sbjct: 400 KGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGAKQLLSSMIVRGIK 459

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA--- 245
           P +VTY TL  G  +  ++E A++++++  + D  ++   YN+ +DGLCK G I  A   
Sbjct: 460 PDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIDAARLL 519

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           V+  +  G     LD   YN L+ G C +G +E A  LF  +     + ++V+YNIMI+ 
Sbjct: 520 VDKLQQNGF----LDSVTYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVSYNIMINF 575

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC  G + +A +L   M    + P++I + TLI  FV+      VIEL   M  K  +PD
Sbjct: 576 LCKMGLIQQAMELMRAMASQGIVPDLITYTTLITNFVKSYGSDNVIELHDYMVLKGAVPD 635



 Score =  148 bits (373), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 185/390 (47%), Gaps = 41/390 (10%)

Query: 15  NTVTYNTIIDGLCKE-GFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           N  T+N II  LCKE   ++    ++L +K E I P+VV++N +I       + + A +L
Sbjct: 213 NVNTFNLIIYALCKECKLLEAISVVYLMLKIE-IWPNVVSFNMIIDKASKMGEMDLALKL 271

Query: 74  F--FEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
               E++  G V P++VT+N I++  CK  +++ A  +L  M++  +  N  TY+ L+DG
Sbjct: 272 TRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDSNERTYAPLIDG 331

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G ++ A  L   M       D V YN LI       E+EEA  L  +M+++ I P 
Sbjct: 332 YARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDMINRRILPD 391

Query: 191 VVTYNTLFLGL-----------------------------------FEIHQVEHALKLFE 215
             TY+ L  GL                                   F+   +  A +L  
Sbjct: 392 EFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGAKQLLS 451

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
            M    +  D  TY T + G CK G I  AV+++        + ++  YN ++DGLCK G
Sbjct: 452 SMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQG 511

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
            ++ A  L   L +   + D VTYN ++HG C +G+++KA  LFL+M       N++ + 
Sbjct: 512 SIDAARLLVDKLQQNGFL-DSVTYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVSYN 570

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +I+   ++    + +EL+  M  + ++PD
Sbjct: 571 IMINFLCKMGLIQQAMELMRAMASQGIVPD 600



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 169/349 (48%), Gaps = 3/349 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +C  N   ++ ++    +   V+ A  +  +++ E     +  +N+ ++ L    + ++ 
Sbjct: 139 ICNSNPAVFDALVRTCTQLKSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDKF 198

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             ++ EM+  G   +V TFN+I+  LCK  K+ EA  ++ LM++ ++ PN  +++ ++D 
Sbjct: 199 WNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMIIDK 258

Query: 131 FCLTGKINRAEELFGSMESMG---CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
               G+++ A +L  + E +       + V+YN +ING+CK + +E A ++  EM+  GI
Sbjct: 259 ASKMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGI 318

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
                TY  L  G      ++ A +L +EM    +  DT  YN+ I  L   G + EA  
Sbjct: 319 DSNERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASF 378

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +   +   D   Y+ L  GLC SG L  AL +   +  R LV D  T+NI+I+ + 
Sbjct: 379 LLSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMF 438

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
               +  A  L   M    + P+++ + TL+ G  +  K    +++  K
Sbjct: 439 QSRNIAGAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDK 487



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 89/152 (58%), Gaps = 1/152 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N V YN+I+DGLCK+G +D A+ L  +++ +N   D VTYN+L+HG C   +  +A  
Sbjct: 494 KSNLVVYNSILDGLCKQGSIDAARLLVDKLQ-QNGFLDSVTYNTLLHGFCVNGEVEKAFA 552

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM++ G   ++V++N++++ LCK G + +A  L+  M  + + P+  TY+TL+  F 
Sbjct: 553 LFLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMELMRAMASQGIVPDLITYTTLITNFV 612

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
            +   +   EL   M   G   D  +Y  L++
Sbjct: 613 KSYGSDNVIELHDYMVLKGAVPDRQTYQSLVS 644



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 1/185 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY T++ G CKEG ++ A  ++ +    +   ++V YNS++ GLC     + A+ 
Sbjct: 459 KPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIDAARL 518

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  ++   G   SV T+N ++   C NG++++A  L   M+      N  +Y+ +++  C
Sbjct: 519 LVDKLQQNGFLDSV-TYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVSYNIMINFLC 577

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G I +A EL  +M S G   D ++Y  LI  + K+   +  + L+  MV KG  P   
Sbjct: 578 KMGLIQQAMELMRAMASQGIVPDLITYTTLITNFVKSYGSDNVIELHDYMVLKGAVPDRQ 637

Query: 193 TYNTL 197
           TY +L
Sbjct: 638 TYQSL 642



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 122/245 (49%), Gaps = 3/245 (1%)

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+ ++   ++  M + G   +  ++N++I   CK  ++ EA+S+   M+   I P VV++
Sbjct: 193 GETDKFWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSF 252

Query: 195 NTLFLGLFEIHQVEHALKLF---EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           N +     ++ +++ ALKL    E +    V+ +  TYN  I+G CK   +  A  +   
Sbjct: 253 NMIIDKASKMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAE 312

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  L  + + + Y  LIDG  + G L++A  L   +    L+ D V YN +I+ L  +G+
Sbjct: 313 MIKLGIDSNERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGE 372

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A  L  DM    + P+   +  L  G       +K + + + + E+ ++ DA   ++
Sbjct: 373 LEEASFLLSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNI 432

Query: 372 VVDLL 376
           +++ +
Sbjct: 433 LINYM 437


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 178/357 (49%), Gaps = 1/357 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C P  V YN +IDG C+ G + +   L  +M+ + I P VVTY ++IH L    D  
Sbjct: 109 GEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLT 168

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           + + L  EM  +G+ P+V  +N +++ LCK     +AS +L+ MV+    P+  T++T++
Sbjct: 169 KVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMI 228

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            GFC  G +  A +L       G + + +SY  LI+G+C   E   A  L  EM+ +G  
Sbjct: 229 AGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHT 288

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P ++T   L  GL    QV  AL + E+M    V  D + YN  I GLCK   +  A  L
Sbjct: 289 PDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNL 348

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +   K + D   Y  LIDG  +S +L  A ++F  +  +    D+V YN+MI G C 
Sbjct: 349 LEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKA-CPDIVAYNVMIKGYCK 407

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            G M +A      M +    P+   + TL+ G+ +    S  + LL  M +++  P+
Sbjct: 408 FGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPN 464



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 176/352 (50%), Gaps = 1/352 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTY  II  L ++G + K ++L  +M+   ++P+V  YN++I+ LC     ++A  +
Sbjct: 149 PTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDM 208

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+     P VVTFN ++   C+ G + EA +LL   ++R + PN  +Y+ L+ GFC+
Sbjct: 209 LNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCV 268

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A +L   M   G   D ++   LI+G   + +V +AL +  +M  + + P    
Sbjct: 269 RGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANI 328

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  GL +   +  A  L EEM    V  D   Y T IDG  ++  + +A ++F  + 
Sbjct: 329 YNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFME 388

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  DI AYN +I G CK G ++ A+    S+ +   + D  TY  ++ G    G + 
Sbjct: 389 EKACP-DIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDIS 447

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +  L  DM +    PN+  + +LI G+  I       +L  KM+ + + P+
Sbjct: 448 ASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPN 499



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 175/363 (48%), Gaps = 1/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   YNT+I+ LCK     +A  +  QM     NPDVVT+N++I G C   D  EA +L
Sbjct: 184 PNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKL 243

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             E + +G++P+ +++  ++   C  G+   AS LL  M+ R   P+  T   L+ G  +
Sbjct: 244 LREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVV 303

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G++N A  +   M       D   YN+LI+G CK + +  A +L  EM+ + ++P    
Sbjct: 304 SGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFI 363

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G     ++  A K+FE M+ +    D   YN  I G CK G + EAV    ++ 
Sbjct: 364 YTTLIDGFVRSDKLSDARKIFEFME-EKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMR 422

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  D   Y  L+DG  K G +  +L L   + +R    ++ TY  +I G CN G   
Sbjct: 423 KAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTY 482

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A DLF  M+   + PNV+ +  LI    + +K  +       M      P+ + V  +V
Sbjct: 483 SAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLV 542

Query: 374 DLL 376
           + L
Sbjct: 543 NGL 545



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 166/358 (46%), Gaps = 3/358 (0%)

Query: 19  YNT--IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           Y+T  ++ GLC EG V++ + L     GE   P  V YN LI G C   D      L  E
Sbjct: 82  YSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGE 141

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M  +G+ P+VVT+  I+  L + G + +   LL  M  R + PN   Y+T+++  C    
Sbjct: 142 METKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRS 201

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
            ++A ++   M       D V++N +I G+C+  +V EAL L RE + +G++P  ++Y  
Sbjct: 202 ASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTP 261

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G     +   A  L  EM       D  T    I GL  +G + +A+ +   +   +
Sbjct: 262 LIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQ 321

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              D   YN LI GLCK   L  A  L   +  + +  D   Y  +I G     ++  A 
Sbjct: 322 VMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDAR 381

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +F  MEE A  P+++ +  +I G+ +     + +  +  M++   +PD    + +VD
Sbjct: 382 KIFEFMEEKA-CPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVD 438



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 174/386 (45%), Gaps = 49/386 (12%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN ++Y  +I G C  G    A  L ++M G    PD++T  +LIHGL  +   N+A  
Sbjct: 253 EPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALI 312

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M ++ V P    +NV++  LCK   +  A  LL+ M+++ V+P+ F Y+TL+DGF 
Sbjct: 313 VREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFV 372

Query: 133 LTGKINRAEELF----------------------------------GSMESMGCKHDDVS 158
            + K++ A ++F                                   SM   GC  D+ +
Sbjct: 373 RSDKLSDARKIFEFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFT 432

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y  L++GY K  ++  +L L  +M+ +  KP + TY +L  G   I     A  LF +MQ
Sbjct: 433 YTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQ 492

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL--CKSGR 276
            + +  +   Y   I  L K   +++A   F  + +  C  +    + L++GL  C+ G 
Sbjct: 493 SEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGM 552

Query: 277 L-------------EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
           +                L++FR L    L   +  YN +I  LC    + KA DL   M 
Sbjct: 553 VNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMS 612

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSK 349
                P+ I F++L++GF    +  K
Sbjct: 613 NKGCLPDPITFLSLLYGFSSAGESGK 638



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 151/333 (45%), Gaps = 1/333 (0%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
           ++A+ L+ +M       D  +   ++ GLC      E + L      +G  P  V +NV+
Sbjct: 63  ERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVL 122

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           +D  C+ G +     LL  M  + + P   TY  ++      G + + E L G M + G 
Sbjct: 123 IDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGL 182

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
             +   YN +IN  CK +   +A  +  +MV     P VVT+NT+  G      V  ALK
Sbjct: 183 SPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALK 242

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           L  E  R  +  +  +Y   I G C  G  + A +L   +       D+     LI GL 
Sbjct: 243 LLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLV 302

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
            SG++  AL +   +  R ++ D   YN++I GLC    +  A +L  +M E  V P+  
Sbjct: 303 VSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKF 362

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           I+ TLI GFVR +K S   ++   M+EK   PD
Sbjct: 363 IYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PD 394



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 159/329 (48%), Gaps = 1/329 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+NT+I G C+EG V +A  L  +     + P+ ++Y  LIHG C   +   A  L
Sbjct: 219 PDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDL 278

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EMM +G  P ++T   ++  L  +G++++A  + + M +R V P+A  Y+ L+ G C 
Sbjct: 279 LVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCK 338

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              ++ A+ L   M     + D   Y  LI+G+ ++ ++ +A  ++  M  K   P +V 
Sbjct: 339 KRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVA 397

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  G  +   ++ A+     M++     D  TY T +DG  K G I  ++ L   + 
Sbjct: 398 YNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMM 457

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +C+ +I  Y  LI G C  G    A +LF  +    L  +VV Y ++I  L    ++ 
Sbjct: 458 KRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVI 517

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           +A   F  M  N   PN      L++G V
Sbjct: 518 QAAAYFEHMLLNHCPPNDATVHYLVNGLV 546



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 139/274 (50%)

Query: 103 DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
           + A  L   M+ R+   + ++   ++ G CL G++     L  +    GC    V YN+L
Sbjct: 63  ERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVL 122

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           I+GYC+  ++   L L  EM +KGI PTVVTY  +   L     +     L  EM+   +
Sbjct: 123 IDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGL 182

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
           + +   YNT I+ LCK     +A ++   +   +   D+  +N +I G C+ G +  AL+
Sbjct: 183 SPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALK 242

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           L R   RR L  + ++Y  +IHG C  G+   A DL ++M      P++I    LIHG V
Sbjct: 243 LLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLV 302

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              + +  + +  KM E++VMPDA+I ++++  L
Sbjct: 303 VSGQVNDALIVREKMAERQVMPDANIYNVLISGL 336



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 20/229 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TY T++DG  K+G +  +  L   M      P++ TY SLI G C+  D   A+
Sbjct: 426 CIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAE 485

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF +M  +G+ P+VV + V++  L K  K+ +A+   + M+     PN  T   L++G 
Sbjct: 486 DLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGL 545

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
                             + C+H  V+ N   +   +  E    L ++R ++S G+ P +
Sbjct: 546 ------------------VNCRHGMVNSN--RSDTKQAHEKSALLDVFRGLISDGLDPRI 585

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
             YN +   L   + +  A+ L ++M       D  T+ + + G    G
Sbjct: 586 SAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAG 634



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 43/98 (43%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    YN II  LC+   + KA  L  +M  +   PD +T+ SL++G   A +  + +  
Sbjct: 583 PRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGKWRSA 642

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL 111
                 Q     +  +  + ++   +  + E SR+L L
Sbjct: 643 LPNEFQQDEFEIITKYMALFNQHVTSSVVGEVSRILQL 680



 Score = 39.3 bits (90), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 51/112 (45%)

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
           NCL+  L +  R E A  L+  +  R   AD  +  +M+ GLC +G++++   L      
Sbjct: 50  NCLLRLLVERRRWERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWG 109

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               P  + +  LI G+ R     + + LL +M+ K ++P       ++  L
Sbjct: 110 EGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWL 161


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 200/362 (55%), Gaps = 2/362 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ ++Y T+I+ L K G +  A  LF +M    +NPDV+ YN LI G     D+ +A  +
Sbjct: 182 PDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEI 241

Query: 74  FFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  ++ +  V PSV T+N++++ LCK GK+DE+  + + M + +  P+ FT+S+++ G  
Sbjct: 242 WKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLS 301

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  N AE++F  M   G   D  +YN +++G  +  ++ +   L+  M SK     +V
Sbjct: 302 KAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVM-SKNNCCNIV 360

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YN L  GL +  +VE A+  ++ +    + AD++TY   I+GLCKNGY+ +A+ +    
Sbjct: 361 SYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEA 420

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +LD  AY+ ++ GLCK G LE A+EL   + +     +   +N +I+G     ++
Sbjct: 421 ENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKL 480

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A  +  +M+    AP V+ + T+I+G  +  + S     L +M E+ + PD    S++
Sbjct: 481 EEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLL 540

Query: 373 VD 374
           +D
Sbjct: 541 ID 542



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 196/360 (54%), Gaps = 1/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN ++ GL + G ++K   L+  M   N   ++V+YN LI GL       +A   
Sbjct: 323 PDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNC-CNIVSYNMLIQGLLDNKKVEQAICY 381

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           +  + ++G++    T+ ++++ LCKNG +++A R+L+         + F YS+++ G C 
Sbjct: 382 WQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCK 441

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G + +A EL   M+    K +   +N LINGY +  ++EEA+S+ REM SK   PTVV+
Sbjct: 442 KGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVS 501

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+  GL +  +   A    +EM  + +  D  TY+  IDGLC+   +  A+ L+    
Sbjct: 502 YNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCI 561

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             + + D+Q +N +I GLC + ++++ALE+F  + +   V D+VT+N ++ GL   G   
Sbjct: 562 NKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCV 621

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  ++  + E  + P++I +     G     + S  IE L+   ++ ++P+A   +++V
Sbjct: 622 EALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLV 681



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 193/364 (53%), Gaps = 2/364 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P   ++N++++   +     +A+  F   +   ++P++ TYN LI   C    + + K
Sbjct: 110 CNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGK 169

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M + G+ P ++++  +++ L K+G + +A  L D M  R V P+   Y+ L+DGF
Sbjct: 170 GLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGF 229

Query: 132 CLTGKINRAEELFGSMESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
              G   +A E++  + +    +  V +YNI+ING CK  +++E++ ++  M      P 
Sbjct: 230 LRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPD 289

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           + T++++  GL +      A K+F+EM    ++ D  TYN  + GL + G + +  EL+ 
Sbjct: 290 LFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWN 349

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +    C  +I +YN LI GL  + ++E A+  ++ L  R L AD  TY ++I+GLC +G
Sbjct: 350 VMSKNNC-CNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNG 408

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            ++KA  +  + E      +   + +++HG  +     + +EL+H+MK+ +   ++ + +
Sbjct: 409 YLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFN 468

Query: 371 MVVD 374
            +++
Sbjct: 469 SLIN 472



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 167/328 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V+YN +I GL     V++A   +  +    +  D  TY  LI+GLC     N+A R+ 
Sbjct: 358 NIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRIL 417

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            E  ++G       ++ ++  LCK G +++A  L+  M +   + N+  +++L++G+   
Sbjct: 418 EEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRA 477

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            K+  A  +   M+S  C    VSYN +ING CK +   +A    +EM+ +G+KP ++TY
Sbjct: 478 FKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITY 537

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + L  GL    +V+ AL L+ +     +  D   +N  I GLC    +  A+E+F  +  
Sbjct: 538 SLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQ 597

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           + C  D+  +N +++GL K+G    AL+++  +    L  D+++YNI   GLC+  ++  
Sbjct: 598 VNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSD 657

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           A +   D  +  + PN   +  L+   V
Sbjct: 658 AIEFLYDALDRGILPNAPTWNVLVRAVV 685



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 165/297 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K ++ TY  +I+GLCK G+++KA  +  + + E  + D   Y+S++HGLC      +A  
Sbjct: 391 KADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVE 450

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M     + +   FN +++   +  K++EA  +L  M  +D  P   +Y+T+++G C
Sbjct: 451 LIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLC 510

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              + + A      M   G K D ++Y++LI+G C+ ++V+ AL+L+ + ++K +KP + 
Sbjct: 511 KAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQ 570

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            +N +  GL    +V+ AL++F +M++ +   D  T+NT ++GL K G  VEA++++  +
Sbjct: 571 MHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRI 630

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
                + DI +YN    GLC   R+  A+E       R ++ +  T+N+++  + +D
Sbjct: 631 LEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDD 687



 Score =  130 bits (327), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 134/259 (51%), Gaps = 2/259 (0%)

Query: 103 DEASRLLDLMVQ-RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           D+A  L   MV      P   +++++++ F  + +   AE  F   ++ G   +  +YNI
Sbjct: 95  DQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNI 154

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LI   CK ++ E+   L   M   G+ P +++Y TL   L +   +  A++LF+EM    
Sbjct: 155 LIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRG 214

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELF-RTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
           V  D   YN  IDG  + G  V+A E++ R L        ++ YN +I+GLCK G+L+ +
Sbjct: 215 VNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDES 274

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           +E++  + +     D+ T++ MIHGL   G  + A  +F +M E+ ++P+V  +  ++ G
Sbjct: 275 MEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSG 334

Query: 341 FVRINKPSKVIELLHKMKE 359
             R  K +K  EL + M +
Sbjct: 335 LFRTGKLNKCFELWNVMSK 353



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 134/232 (57%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N+  +N++I+G  +   +++A ++  +MK ++  P VV+YN++I+GLC A  +++A  
Sbjct: 461 KLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYL 520

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              EM+++G++P ++T+++++D LC+  K+D A  L    + + ++P+   ++ ++ G C
Sbjct: 521 SLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLC 580

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K++ A E+F  M  + C  D V++N ++ G  K  +  EAL ++  ++  G++P ++
Sbjct: 581 TAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDII 640

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           +YN  F GL    +V  A++   +     +  +  T+N  +  +  +  ++E
Sbjct: 641 SYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPLME 692



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 97/186 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  V+YNTII+GLCK      A     +M  E + PD++TY+ LI GLC     + A 
Sbjct: 495 CAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMAL 554

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L+ + +++ ++P +   N+I+  LC   K+D A  +   M Q +  P+  T++T+M+G 
Sbjct: 555 NLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGL 614

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G    A +++  +   G + D +SYNI   G C    V +A+    + + +GI P  
Sbjct: 615 YKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNA 674

Query: 192 VTYNTL 197
            T+N L
Sbjct: 675 PTWNVL 680



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 51/84 (60%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           V C P+ VT+NTI++GL K G   +A  ++ ++    + PD+++YN    GLC     ++
Sbjct: 598 VNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSD 657

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIM 93
           A    ++ +D+G+ P+  T+NV++
Sbjct: 658 AIEFLYDALDRGILPNAPTWNVLV 681


>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
 gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 738

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 201/397 (50%), Gaps = 41/397 (10%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
            Y  +I G C E  +D+A+++FL+M+ + + PDV  Y +L+HG C++ ++++A  ++  M
Sbjct: 297 AYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSM 356

Query: 78  MDQGVQPSVVTF-----------------------------------NVIMDELCKNGKM 102
           + +G++ + V F                                   N++ D LCK GK+
Sbjct: 357 ISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKV 416

Query: 103 DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
           D+A  +LD +    +  +   Y+TL++G+ L GK   A+ LF  ME  G K D V+YN+L
Sbjct: 417 DDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVL 476

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
             G+ +N+   EA+ L   M S+G++P   T+  +  GL    +VE A + F  ++ + V
Sbjct: 477 AAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESV 536

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ------AYNCLIDGLCKSGR 276
                 Y   ++G C+   I ++ EL     +L+  L++        Y+ +   LC +G 
Sbjct: 537 EISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGN 596

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +E A  LF          D VTY IMI+G C    + +AH+LF DM+E  + P+ + +  
Sbjct: 597 MEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTI 656

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +I+G+ ++N   +  EL   MKE+ + PD    ++++
Sbjct: 657 MINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVII 693



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 179/365 (49%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           VV  PN +++N +I+ L K   VD A  LF++ K   +  +  TY  +I  LC   DW  
Sbjct: 184 VVILPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWEN 243

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
             R+F EM + GV      +   ++ LCKN + D    +L     R+   + + Y+ ++ 
Sbjct: 244 VVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIR 303

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GFC   K++ AE +F  ME  G   D   Y  L++GYC ++  ++AL++Y+ M+S+GIK 
Sbjct: 304 GFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKT 363

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             V ++ +   L E+ +    + +FEE +   +  D   YN   D LCK G + +AV + 
Sbjct: 364 NCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGML 423

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             L  ++ ++D++ Y  LI+G    G+   A  LF+ +  R    DVV YN++  G   +
Sbjct: 424 DELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRN 483

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
               +A DL   ME   V PN      +I G     K  +  E  + +K + V     I 
Sbjct: 484 RTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIY 543

Query: 370 SMVVD 374
           + +V+
Sbjct: 544 TALVN 548



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 160/322 (49%), Gaps = 6/322 (1%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
            YN + D LCK G VD A  +  ++K   ++ D+  Y +LI+G        EA+ LF EM
Sbjct: 402 AYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEM 461

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
            ++G +P VV +NV+     +N    EA  LL+ M  + V PN+ T+  +++G C  GK+
Sbjct: 462 EERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKV 521

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYC------KNKEVEEALSLYREMVSKGIKPTV 191
             AEE F  ++    +     Y  L+NGYC      K+ E++EA  L R M+   +KP+ 
Sbjct: 522 EEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSK 581

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V Y+ +F  L     +E A  LF          D  TY   I+G CK   + EA ELF+ 
Sbjct: 582 VMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKD 641

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D   Y  +I+G CK   L  A ELF+ +  R +  DV+ Y ++I GL N G 
Sbjct: 642 MKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGH 701

Query: 312 MDKAHDLFLDMEENAVAPNVII 333
            + A  L+ +M +  + P   +
Sbjct: 702 TEIAFQLYNEMIDMGMTPGATL 723



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 120/211 (56%), Gaps = 6/211 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA------ND 66
           +PN+ T+  II+GLC  G V++A+  F  +KGE++   V  Y +L++G C A      ++
Sbjct: 502 EPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHE 561

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             EA  L   M++  ++PS V ++ I   LC NG M+ A  L +L +     P+A TY+ 
Sbjct: 562 LKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTI 621

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           +++G+C T  +  A ELF  M+  G   D V+Y I+INGYCK   + EA  L+++M  +G
Sbjct: 622 MINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERG 681

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           IKP V+ Y  +  GL      E A +L+ EM
Sbjct: 682 IKPDVIAYTVIIKGLLNSGHTEIAFQLYNEM 712



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 122/246 (49%), Gaps = 6/246 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V YN +  G  +     +A  L   M+ + + P+  T+  +I GLC A    EA+ 
Sbjct: 467 KPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEE 526

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELC------KNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            F  +  + V+ SV  +  +++  C      K+ ++ EA  LL  M++ +++P+   YS 
Sbjct: 527 FFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSK 586

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           +    C  G +  A  LF      G   D V+Y I+INGYCK   + EA  L+++M  +G
Sbjct: 587 IFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERG 646

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           I P  VTY  +  G  +++ +  A +LF++M+   +  D   Y   I GL  +G+   A 
Sbjct: 647 ITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAF 706

Query: 247 ELFRTL 252
           +L+  +
Sbjct: 707 QLYNEM 712



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 167/353 (47%), Gaps = 31/353 (8%)

Query: 35  AKALFLQMKGEN-INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIM 93
           A + F Q+K ++  + ++ TY S+I  LC+ N   +   LF +++D   Q      NV+ 
Sbjct: 78  AYSYFTQLKNQHGFSHNIQTYTSIIRILCYYNLDRKLDSLFLDIIDHSKQDPCFEINVLF 137

Query: 94  DELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF---CLTGK--INRAEELFGSME 148
           D L +                 DV  + + ++   +GF   C++    +   + L  + +
Sbjct: 138 DSLFEG--------------VNDVNEDHYLFNAF-NGFVKACVSQNMFVEAIDFLLQTRK 182

Query: 149 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 208
           ++    + +S+N LIN   K+ EV+ AL L+    S G+     TY  +   L +    E
Sbjct: 183 NVVILPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWE 242

Query: 209 HALKLFEEMQRDDVAADTSTYNTFIDGLCKN-----GYIVEAVELFRTLGILKCELDIQA 263
           + +++F+EM+   V  D+  Y TFI+GLCKN     GY V  ++ +RT       +   A
Sbjct: 243 NVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAV--LQDYRTRN---AHVHKYA 297

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
           Y  +I G C   +L+ A  +F  + ++ LV DV  Y  ++HG CN    DKA  ++  M 
Sbjct: 298 YTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMI 357

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              +  N +IF  ++H    + +  +V+++  + KE  +  D    +++ D L
Sbjct: 358 SRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDAL 410



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 71/139 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V Y+ I   LC  G ++ A  LF         PD VTY  +I+G C  N   EA  
Sbjct: 578 KPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHE 637

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF +M ++G+ P  VT+ ++++  CK   + EA  L   M +R ++P+   Y+ ++ G  
Sbjct: 638 LFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLL 697

Query: 133 LTGKINRAEELFGSMESMG 151
            +G    A +L+  M  MG
Sbjct: 698 NSGHTEIAFQLYNEMIDMG 716



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 61/108 (56%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY  +I+G CK   + +A  LF  MK   I PD VTY  +I+G C  N   EA  L
Sbjct: 614 PDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHEL 673

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNA 121
           F +M ++G++P V+ + VI+  L  +G  + A +L + M+   + P A
Sbjct: 674 FKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGMTPGA 721


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 181/351 (51%), Gaps = 3/351 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  ++N ++  L   G +  A   F +M      PDVVTY +++HG C   +   A +L 
Sbjct: 254 NVCSHNILLKALLSAGRLKDACQHFDEMSSP---PDVVTYGTMVHGYCVRGELENAVKLL 310

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM  +G++ +   +  ++  LC  G++ +A R+L+ M    V  +A  ++T++ GFC  
Sbjct: 311 DEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSK 370

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +  A  LF  M+  G   D V++  LING C+  E++EA  + +EMV KG+   VVTY
Sbjct: 371 GDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTY 430

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  G  +   +  A ++  EM    VA +  TY    DGLCK G +  A EL   +  
Sbjct: 431 TVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCN 490

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              EL++  YN LI+GLCK G LE A+ +   +       DV TY  +I  LC  G+ D+
Sbjct: 491 KGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDR 550

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           AH++  +M +  + P++  +  L++GF    +     +LL  M EK V P+
Sbjct: 551 AHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPN 601



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 182/360 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY T++ G C  G ++ A  L  +M  + +  +   Y S+I  LC+    ++A R+
Sbjct: 285 PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRV 344

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   GV    V F  ++   C  G +  A RL + M +R +  +  T++ L++G C 
Sbjct: 345 LEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCR 404

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A+ +   M   G   D V+Y +LI+GYCK   + EA  ++ EMV + + P VVT
Sbjct: 405 AGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVT 464

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +   V  A +L  EM    +  +  TYN+ I+GLCK G + +A+ +   + 
Sbjct: 465 YTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEME 524

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+  Y  LID LCKSG  + A  + + +  + +   + TYN++++G C  G+++
Sbjct: 525 AAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVE 584

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
               L   M E  V PNV+ + +L+  +          E+   M  ++V P+ +  ++++
Sbjct: 585 GGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILI 644



 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 182/361 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + V + T+I G C +G +  A+ LF +M+   +  D VT+ +LI+GLC A +  EA R+ 
Sbjct: 356 DAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVL 415

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+D+G+   VVT+ V++D  CK G M EA R+ + MV R V PN  TY+ L DG C  
Sbjct: 416 QEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQ 475

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +  A EL   M + G + +  +YN LING CK   +E+A+ +  EM + G +  V TY
Sbjct: 476 GDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTY 535

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            TL   L +  + + A  + +EM    +    +TYN  ++G C +G +    +L   +  
Sbjct: 536 TTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLE 595

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                ++  YN L+   C    ++   E+++ +  + +  +  TYNI+I G C    M +
Sbjct: 596 KNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKE 655

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A     +M E  +      +  LI    +  K S+      KM+ + +  +  + S  +D
Sbjct: 656 ALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMD 715

Query: 375 L 375
           +
Sbjct: 716 I 716



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 178/362 (49%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N   Y ++I  LC +G V  A  +   M    +  D V + ++I G C   D   A+RLF
Sbjct: 321 NATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLF 380

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM  +G+    VT   +++ LC+ G++ EA R+L  MV + +  +  TY+ L+DG+C  
Sbjct: 381 EEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKR 440

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +  A  +   M       + V+Y  L +G CK  +V  A  L  EM +KG++  V TY
Sbjct: 441 GNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTY 500

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N+L  GL +   +E A+++  EM+      D  TY T ID LCK+G    A  + + +  
Sbjct: 501 NSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLD 560

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              +  I  YN L++G C SGR+E   +L   +  + +  +VVTYN ++   C D  M  
Sbjct: 561 KGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKS 620

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +++  M    VAPN   +  LI G  +     + +    +M EK +   AS  S ++ 
Sbjct: 621 TTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIR 680

Query: 375 LL 376
           LL
Sbjct: 681 LL 682



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 143/265 (53%), Gaps = 35/265 (13%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC-- 62
           N  +G    PN VTY  + DGLCK+G V  A  L  +M  + +  +V TYNSLI+GLC  
Sbjct: 451 NEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKF 510

Query: 63  -----------------HAND----------------WNEAKRLFFEMMDQGVQPSVVTF 89
                            H  D                ++ A  +  EM+D+G++PS+ T+
Sbjct: 511 GNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATY 570

Query: 90  NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
           NV+M+  C +G+++   +LL+ M++++VRPN  TY++LM  +C+   +    E++  M S
Sbjct: 571 NVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHS 630

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
                ++ +YNILI G+CK + ++EAL  ++EM+ KG++ T  +Y+ L   L +  +   
Sbjct: 631 QEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSE 690

Query: 210 ALKLFEEMQRDDVAADTSTYNTFID 234
           A   F++M+ + + A+   Y+ ++D
Sbjct: 691 ARVFFDKMRNEGLTAEPDVYSFYMD 715



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 179/361 (49%), Gaps = 11/361 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  + N ++  L     +D+A ALF ++  +N    V ++N L+  L  A    +A + 
Sbjct: 226 PSPESCNAVLSRLP----LDEAIALFRELPDKN----VCSHNILLKALLSAGRLKDACQH 277

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM      P VVT+  ++   C  G+++ A +LLD M  + +  NA  Y++++   C 
Sbjct: 278 FDEM---SSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCN 334

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A  +   M   G   D V +  +I+G+C   ++  A  L+ EM  +G+    VT
Sbjct: 335 KGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVT 394

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  GL    +++ A ++ +EM    +  D  TY   IDG CK G +VEA  +   + 
Sbjct: 395 HTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMV 454

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +   ++  Y  L DGLCK G +  A EL   +  + L  +V TYN +I+GLC  G ++
Sbjct: 455 GRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLE 514

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  +  +ME      +V  + TLI    +  +  +   +L +M +K + P  +  ++++
Sbjct: 515 QAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLM 574

Query: 374 D 374
           +
Sbjct: 575 N 575



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 166/339 (48%), Gaps = 11/339 (3%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           L  +++   ++P   + N+++  L      +EA  LF E+ D+    +V + N+++  L 
Sbjct: 215 LLRRLRQYGLSPSPESCNAVLSRL----PLDEAIALFRELPDK----NVCSHNILLKALL 266

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
             G++ +A +  D M      P+  TY T++ G+C+ G++  A +L   M + G + +  
Sbjct: 267 SAGRLKDACQHFDEMSSP---PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNAT 323

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            Y  +I   C   +V +AL +  +M   G+    V + T+  G      +  A +LFEEM
Sbjct: 324 VYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEM 383

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
           Q+  +AAD  T+   I+GLC+ G + EA  + + +     ++D+  Y  LIDG CK G +
Sbjct: 384 QKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNM 443

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A  +   +  R +  +VVTY  +  GLC  G +  A++L  +M    +  NV  + +L
Sbjct: 444 VEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSL 503

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           I+G  +     + + ++ +M+      D    + ++D L
Sbjct: 504 INGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTL 542



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 82/171 (47%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TYN +++G C  G V+  K L   M  +N+ P+VVTYNSL+   C   +      
Sbjct: 564 KPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTE 623

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++  M  Q V P+  T+N+++   CK   M EA      M+++ +R  A +YS L+    
Sbjct: 624 IYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLN 683

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
              K + A   F  M + G   +   Y+  ++       +E  ++L  E+V
Sbjct: 684 KKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELV 734


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 187/366 (51%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G V + N V  NT+I G   EG + +A  L+  M  +   PDV TYN L+HGLC     
Sbjct: 308 LGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRC 367

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A R+  EM ++G  P++VT++ ++   C+NG  D+A  +LD M  +    N+  Y+ +
Sbjct: 368 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGI 427

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +      GK++ A  L   M+S GCK D  +YN +I   C N +++EA  ++  ++ +G+
Sbjct: 428 IYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGV 487

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
               +TYNTL   L    + +  L+L  EM       D  +YN  I  LCK G +  ++ 
Sbjct: 488 VANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMM 547

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L   +     + +  +YN LI+ LCK+G++  ALEL + +  + L  D+VTYN +I+GLC
Sbjct: 548 LLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLC 607

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G    A +L   +    V P+++ +  LI    ++        LL K     ++P+  
Sbjct: 608 KVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNER 667

Query: 368 IVSMVV 373
              M+V
Sbjct: 668 TWGMMV 673



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 185/354 (52%), Gaps = 4/354 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY  ++ GLC+    D+A A+  ++   N    VV  N++I G         A 
Sbjct: 281 CTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVN----VVMLNTVIRGCLAEGKLARAT 336

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L+  M  +G  P V T+N++M  LCK G+   A R+LD M ++   PN  TYSTL+  F
Sbjct: 337 ELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSF 396

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G  + A  +   M + G   +   YN +I    K+ +++EA+ L +EM S+G KP +
Sbjct: 397 CRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDI 456

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYNT+   L    Q++ A  +F  +  + V A+  TYNT I  L  +G   E + L   
Sbjct: 457 CTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANE 516

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +  C LD+ +YN LI  LCK G ++ ++ L   +  + +  +  +YN++I+ LC  G+
Sbjct: 517 MVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGK 576

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +  A +L  +M    + P+++ + TLI+G  ++      + LL K+  + V PD
Sbjct: 577 VRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPD 630



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 174/332 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TYN ++ GLCK G    A  +  +M+ +   P++VTY++L+H  C    W++A+
Sbjct: 347 CPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDAR 406

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  +M  +G   +   +N I+  L K+GK+DEA RL+  M  +  +P+  TY+T++   
Sbjct: 407 AMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHL 466

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   +++ AE +FG++   G   + ++YN LI+    +   +E L L  EMV  G    V
Sbjct: 467 CNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDV 526

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+YN L   L +   V+ ++ L EEM    +  +  +YN  I+ LCK G + +A+EL + 
Sbjct: 527 VSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKE 586

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       DI  YN LI+GLCK G    AL L   LP   +  D+VTYNI+I   C    
Sbjct: 587 MLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRL 646

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           +D A  L        + PN   +  ++  FVR
Sbjct: 647 LDDASMLLDKAVSGGIVPNERTWGMMVQNFVR 678



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 169/345 (48%), Gaps = 4/345 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P T T+      LC+ G    A AL   M      PD V Y ++IH L       EA  
Sbjct: 177 PPTTFTFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAT 236

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+  G    V TFN ++  LC  G + EA+RL+D M+     P+  TY  L+ G C
Sbjct: 237 LLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLC 296

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            T + + A  + G +  +    + V  N +I G     ++  A  LY  M SKG  P V 
Sbjct: 297 RTRQADEAYAMLGRVPEV----NVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVH 352

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L  GL ++ +   A+++ +EM+    A +  TY+T +   C+NG   +A  +   +
Sbjct: 353 TYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM 412

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 ++ Q YN +I  L K G+L+ A+ L + +  +    D+ TYN +I+ LCN+ QM
Sbjct: 413 SAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQM 472

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           D+A  +F ++ E  V  N I + TLIH  +   +  + + L ++M
Sbjct: 473 DEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEM 517



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 181/365 (49%), Gaps = 4/365 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V Y T+I  L  +G V +A  L  +M       DV T+N ++ GLC      EA 
Sbjct: 211 CVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAA 270

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL   MM  G  PSVVT+  ++  LC+  + DEA      M+ R    N    +T++ G 
Sbjct: 271 RLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYA----MLGRVPEVNVVMLNTVIRGC 326

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GK+ RA EL+  M S GC  D  +YNIL++G CK      A+ +  EM  KG  P +
Sbjct: 327 LAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNI 386

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY+TL          + A  + ++M     + ++  YN  I  L K+G + EA+ L + 
Sbjct: 387 VTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQE 446

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ DI  YN +I  LC + +++ A  +F +L    +VA+ +TYN +IH L + G+
Sbjct: 447 MKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGR 506

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
             +   L  +M  +    +V+ +  LI    +     + + LL +M  K + P+    +M
Sbjct: 507 WQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNM 566

Query: 372 VVDLL 376
           +++ L
Sbjct: 567 LINEL 571



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 144/319 (45%), Gaps = 4/319 (1%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           + P   +YN+++  L  A+   +A  L+  M+   V P+  TF V    LC+ G+  +A 
Sbjct: 141 VTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDAL 200

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
            LL  M +    P+A  Y T++      G +  A  L   M  MGC  D  ++N ++ G 
Sbjct: 201 ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGL 260

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           C    V EA  L   M+  G  P+VVTY  L  GL    Q + A  +   +   +V    
Sbjct: 261 CGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVV--- 317

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
              NT I G    G +  A EL+  +G   C  D+  YN L+ GLCK GR   A+ +   
Sbjct: 318 -MLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDE 376

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +  +    ++VTY+ ++H  C +G  D A  +   M     + N   +  +I+   +  K
Sbjct: 377 MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGK 436

Query: 347 PSKVIELLHKMKEKKVMPD 365
             + + L+ +MK +   PD
Sbjct: 437 LDEAMRLVQEMKSQGCKPD 455


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 201/397 (50%), Gaps = 37/397 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  +Y+T+I+ L K G +D A  LF +M    + PDV  YN LI G     D   A +
Sbjct: 181 KPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQ 240

Query: 73  LFFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           L+ +++ D  V P+V T N+++  L K G++D+  ++ D M Q +   + +TYS+L+ G 
Sbjct: 241 LWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGL 300

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +++AE +F  +       D V+YN ++ G+C+  +++E+L L+R M  +     +
Sbjct: 301 CDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNI 359

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+YN L  GL E  +++ A  ++  M     AAD +TY  FI GLC NGY+ +A+ + + 
Sbjct: 360 VSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQE 419

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALEL---------------------------- 283
           +      LD+ AY  +ID LCK  RLE A  L                            
Sbjct: 420 VESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479

Query: 284 -------FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
                   R + +   +  VV+YNI+I GLC  G+  +A     +M EN + P++  +  
Sbjct: 480 LSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSI 539

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           L+ G  R  K    +EL H+  +  + PD  + ++++
Sbjct: 540 LLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILI 576



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 189/348 (54%), Gaps = 1/348 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY+++I GLC EG VDKA+++F ++       DVVTYN+++ G C      E+  L+  +
Sbjct: 292 TYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELW-RI 350

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           M+Q    ++V++N+++  L +NGK+DEA+ +  LM  +    +  TY   + G C+ G +
Sbjct: 351 MEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYV 410

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           N+A  +   +ES G   D  +Y  +I+  CK + +EEA +L +EM   G++      N L
Sbjct: 411 NKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNAL 470

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL    ++  A  L   M ++       +YN  I GLC+ G   EA    + +     
Sbjct: 471 IGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGL 530

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           + D++ Y+ L+ GLC+  ++E+ALEL+    +  L  DV+ +NI+IHGLC+ G++D A  
Sbjct: 531 KPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMT 590

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +  +ME      N++ + TL+ G+ ++   ++   +   M +  + PD
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPD 638



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 198/367 (53%), Gaps = 3/367 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKG-ENINPDVVTYNSLIHGLCHANDWNEA 70
           CK +     ++I    K    D+A  +F +M+      P + +YN+L++    A  W + 
Sbjct: 74  CKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKV 133

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           + LF      GV P++ T+NV++   CK  + ++A   L+ M +   +P+ F+YST+++ 
Sbjct: 134 ESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVIND 193

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIKP 189
              TGK++ A ELF  M       D   YNILI+G+ K K+ + A+ L+ +++    + P
Sbjct: 194 LAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYP 253

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V T+N +  GL +  +V+  LK+++ M++++   D  TY++ I GLC  G + +A  +F
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVF 313

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             L   K  +D+  YN ++ G C+ G+++ +LEL+R + +R  V ++V+YNI+I GL  +
Sbjct: 314 NELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSV-NIVSYNILIKGLLEN 372

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++D+A  ++  M     A +   +   IHG       +K + ++ +++ K    D    
Sbjct: 373 GKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAY 432

Query: 370 SMVVDLL 376
           + ++D L
Sbjct: 433 ASIIDCL 439



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 163/328 (49%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V+YN +I GL + G +D+A  ++  M  +    D  TY   IHGLC     N+A  + 
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVM 417

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            E+  +G    V  +  I+D LCK  +++EAS L+  M +  V  N+   + L+ G    
Sbjct: 418 QEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            +++ A  L   M   GC    VSYNILI G C+  +  EA +  +EM+  G+KP + TY
Sbjct: 478 SRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTY 537

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + L  GL    ++E AL+L+ +  +  +  D   +N  I GLC  G + +A+ +   +  
Sbjct: 538 SILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C  ++  YN L++G  K      A  ++  + +  L  D+++YN ++ GLC   ++  
Sbjct: 598 RNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSY 657

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           A + F D   + + P V  +  L+   V
Sbjct: 658 AIEFFDDARNHGIFPTVYTWNILVRAVV 685



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 149/294 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +  TY   I GLC  G+V+KA  +  +++ +  + DV  Y S+I  LC      EA  L 
Sbjct: 393 DNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLV 452

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM   GV+ +    N ++  L ++ ++ +AS L+  M +    P   +Y+ L+ G C  
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEA 512

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK   A      M   G K D  +Y+IL+ G C+++++E AL L+ + +  G++P V+ +
Sbjct: 513 GKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMH 572

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L  GL  + +++ A+ +   M+  +  A+  TYNT ++G  K      A  ++  +  
Sbjct: 573 NILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYK 632

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           +  + DI +YN ++ GLC   R+  A+E F       +   V T+NI++  + N
Sbjct: 633 MGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVVN 686



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 107/197 (54%), Gaps = 2/197 (1%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           +  G G+ G  C P  V+YN +I GLC+ G   +A A   +M    + PD+ TY+ L+ G
Sbjct: 486 LMRGMGKNG--CLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGG 543

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           LC       A  L+ + +  G++P V+  N+++  LC  GK+D+A  ++  M  R+   N
Sbjct: 544 LCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY+TLM+G+      NRA  ++G M  MG + D +SYN ++ G C    V  A+  + 
Sbjct: 604 LVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFD 663

Query: 181 EMVSKGIKPTVVTYNTL 197
           +  + GI PTV T+N L
Sbjct: 664 DARNHGIFPTVYTWNIL 680



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 113/240 (47%), Gaps = 7/240 (2%)

Query: 137 INRAEELFGSMESMGCKHD-DVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTY 194
           + R  EL  S E   CK D DV+ ++ I  Y KN   + AL +++ M    G +P + +Y
Sbjct: 62  VGRIVELIRSQE---CKCDEDVALSV-IKTYGKNSMPDRALDVFKRMREIFGCEPGIRSY 117

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           NTL     E  Q      LF   +   VA +  TYN  I   CK     +A      +  
Sbjct: 118 NTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWK 177

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + D+ +Y+ +I+ L K+G+L+ ALELF  +  R +  DV  YNI+I G   +     
Sbjct: 178 EGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKM 237

Query: 315 AHDLFLD-MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A  L+   +E+++V PNV     +I G  +  +    +++  +MK+ +   D    S ++
Sbjct: 238 AMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLI 297



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 82/158 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY+ ++ GLC++  ++ A  L+ Q     + PDV+ +N LIHGLC     ++A  
Sbjct: 531 KPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMT 590

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M  +    ++VT+N +M+   K    + A+ +   M +  ++P+  +Y+T++ G C
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLC 650

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
           L  +++ A E F    + G      ++NIL+      K
Sbjct: 651 LCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVVNRK 688



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 1/190 (0%)

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G   + V Y+ +   L E   V H  ++ E ++  +   D     + I    KN     A
Sbjct: 38  GYAHSAVVYHHILRRLSEARMVTHVGRIVELIRSQECKCDEDVALSVIKTYGKNSMPDRA 97

Query: 246 VELFRTLG-ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           +++F+ +  I  CE  I++YN L++   ++ +      LF       +  ++ TYN++I 
Sbjct: 98  LDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIK 157

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
             C   + +KA      M +    P+V  + T+I+   +  K    +EL  +M E++V P
Sbjct: 158 MSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAP 217

Query: 365 DASIVSMVVD 374
           D +  ++++D
Sbjct: 218 DVTCYNILID 227



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 49/82 (59%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N VTYNT+++G  K    ++A  ++  M    + PD+++YN+++ GLC  +  + A 
Sbjct: 600 CTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAI 659

Query: 72  RLFFEMMDQGVQPSVVTFNVIM 93
             F +  + G+ P+V T+N+++
Sbjct: 660 EFFDDARNHGIFPTVYTWNILV 681


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 188/370 (50%), Gaps = 44/370 (11%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TY T++DGLCK   +D+A +L  +M+ E   P   T+N LI+GLC   D+    
Sbjct: 212 CVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVT 271

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   M  +G  P+ VT+N ++  LC  GK+D+A  LLD MV     PN  TY T+++G 
Sbjct: 272 KLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGL 331

Query: 132 CLT-----------------------------------GKINRAEELFGSMESMGCKHDD 156
                                                 GK   A  LF      GCK + 
Sbjct: 332 VKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNT 391

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           V Y+ L++G C++++ +EA+ +  EM  KG  P   T+++L  G FE+     A++++++
Sbjct: 392 VLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKD 451

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M + + A +   Y+  I GLCK+G ++EA+ ++  +    C  D+ AY+ +I GLC +G 
Sbjct: 452 MTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGS 511

Query: 277 LEIALELFRSL----PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           +E AL+L+  +    P      DV+TYNI+ + LC    + +A DL   M +    P+++
Sbjct: 512 VEEALKLYNEMLCLEPDS--QPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLV 569

Query: 333 ---IFVTLIH 339
              IF+ ++ 
Sbjct: 570 TCNIFLRMLR 579



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 190/378 (50%), Gaps = 15/378 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +++N II  +CK G VD A  LF +M      PD  TY +L+ GLC  +  +EA  L
Sbjct: 179 PNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSL 238

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G  PS  TFNV+++ LCK G     ++L+D M  +   PN  TY+TL+ G CL
Sbjct: 239 LDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 298

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+++A  L   M S  C  ++V+Y  +ING  K     +   +   M  +G       
Sbjct: 299 KGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYV 358

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  GLF+  + E A++LF+E        +T  Y+  +DGLC++    EA+++   + 
Sbjct: 359 YSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMT 418

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  +   ++ L+ G  + G    A+E+++ + +     + V Y+++IHGLC DG++ 
Sbjct: 419 DKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVM 478

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM--KEKKVMPDA----- 366
           +A  ++  M      P+V+ + ++I G        + ++L ++M   E    PD      
Sbjct: 479 EAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNI 538

Query: 367 --------SIVSMVVDLL 376
                   S +S  VDLL
Sbjct: 539 LFNALCKQSSISRAVDLL 556



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 183/365 (50%), Gaps = 3/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE---NINPDVVTYNSLIHGLCHANDWN 68
           CKP   ++N++++ + + GF D+A   +  + G    NI P+V+++N +I  +C     +
Sbjct: 139 CKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVD 198

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A  LF EM  +   P   T+  +MD LCK  ++DEA  LLD M      P+  T++ L+
Sbjct: 199 NAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLI 258

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +G C  G   R  +L  +M   GC  ++V+YN LI+G C   ++++ALSL   MVS    
Sbjct: 259 NGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCV 318

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  VTY T+  GL +  +     ++   M+      +   Y+  + GL K G   EA+ L
Sbjct: 319 PNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRL 378

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F+      C+L+   Y+ L+DGLC+  + + A+++   +  +    +  T++ ++ G   
Sbjct: 379 FKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFE 438

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G   KA +++ DM +   A N + +  LIHG  +  K  + + +  KM      PD   
Sbjct: 439 VGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVA 498

Query: 369 VSMVV 373
            S ++
Sbjct: 499 YSSMI 503



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 134/288 (46%), Gaps = 9/288 (3%)

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAF-----TYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           +NG   E+S + D +     +  +F     T+ +L++ +  +   N  E++   M     
Sbjct: 44  ENGSEPESSPISDKIFSSPPKMGSFKVGDSTFYSLIENYAYSSDFNSLEKVLNRMRLENR 103

Query: 153 KHDDVSYNILINGYCKNKEVEEALSL-YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
              + S+ ++   Y K     +A+ L YR       KPTV ++N++   + +    + AL
Sbjct: 104 VFSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRAL 163

Query: 212 KLFEEM--QRD-DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLI 268
           + +  +   +D ++  +  ++N  I  +CK G +  A+ELFR + + KC  D   Y  L+
Sbjct: 164 EFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLM 223

Query: 269 DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVA 328
           DGLCK  R++ A+ L   +          T+N++I+GLC  G   +   L  +M      
Sbjct: 224 DGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCV 283

Query: 329 PNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           PN + + TLIHG     K  K + LL +M   K +P+      +++ L
Sbjct: 284 PNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGL 331



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 23/150 (15%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMK--GENINPDVVTYNSLIHGLCHANDWNE 69
           C+P+ V Y+++I GLC  G V++A  L+ +M     +  PDV+TYN L + LC  +  + 
Sbjct: 492 CRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISR 551

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIM-----------------DELC----KNGKMDEASRL 108
           A  L   M+D+G  P +VT N+ +                 DEL     K  +   AS++
Sbjct: 552 AVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLDELVVRLLKRQRNLGASKI 611

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           +++M+Q+ + P A T++ ++   C   KI 
Sbjct: 612 VEVMLQKFLSPKASTWARVVHELCQPKKIQ 641


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 193/366 (52%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC P+  T+ ++IDGL K+G VD A  ++ +M   +  P+VV Y SLI      +   + 
Sbjct: 335 VCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDG 394

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            +++ EMM  G  P ++  N  MD + K G+ ++   L + +  R   P+  +YS L+  
Sbjct: 395 HKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHS 454

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               G      EL+ +M+  GC  D  +YN +I+G+CK+ +V +A  L  EM + G  PT
Sbjct: 455 LVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPT 514

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY ++  GL +I +++ A  LFEE + + +  +   Y++ IDG  K G + EA  +  
Sbjct: 515 VVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVME 574

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +       ++  +NCL+DGL K+  +  AL  F+S+       + +TY I+I+GLC   
Sbjct: 575 EMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVR 634

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           + +KA   + +M++  + PN I +  +I G  +    ++   L  + +    +PD++  +
Sbjct: 635 KFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYN 694

Query: 371 MVVDLL 376
            +++ L
Sbjct: 695 AMIEGL 700



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 194/365 (53%), Gaps = 1/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V YN I+  L K+G  DKA  +F +MK + + P++ TYN +I  LC A +   A 
Sbjct: 232 CIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAF 290

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++   M + G+ P+V T N+++D LCK  K+DEA  + + M  +   P+  T+ +L+DG 
Sbjct: 291 KVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGL 350

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+++ A  ++  M       + V Y  LI  + K    E+   +Y+EM+  G  P +
Sbjct: 351 GKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDL 410

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +  NT    +F+  + E    LFEE++      DT +Y+  I  L K G+  E  EL+  
Sbjct: 411 MLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYA 470

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C LD +AYN +IDG CKSG++  A +L   +        VVTY  ++ GL    +
Sbjct: 471 MKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDR 530

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A+ LF + + N +  N +I+ +LI GF ++ +  +   ++ +M +K + P+    + 
Sbjct: 531 LDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNC 590

Query: 372 VVDLL 376
           ++D L
Sbjct: 591 LLDGL 595



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 93/269 (34%), Positives = 150/269 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +T  YNT+IDG CK G V+KA  L  +MK    +P VVTY S++ GL   +  +EA 
Sbjct: 476 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAY 535

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF E    G++ + V ++ ++D   K G++DEA  +++ M+Q+ + PN +T++ L+DG 
Sbjct: 536 MLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGL 595

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +IN A   F SM+ + C  + ++Y ILING CK ++  +A   ++EM  +G+KP  
Sbjct: 596 VKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNT 655

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY  +  GL +   V  A  LFE  +      D+++YN  I+GL      ++A +LF  
Sbjct: 656 ITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEE 715

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIA 280
             +  C +  +    L+D L K+  LE A
Sbjct: 716 TRLKGCSIHTKTCVALLDALHKAECLEQA 744



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 155/308 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +  NT +D + K G  +K +ALF ++K     PD  +Y+ LIH L  A    E  
Sbjct: 406 CSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETY 465

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L++ M DQG       +N ++D  CK+GK+++A +LL+ M      P   TY +++DG 
Sbjct: 466 ELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGL 525

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +++ A  LF   +S G + + V Y+ LI+G+ K   V+EA  +  EM+ KG+ P V
Sbjct: 526 AKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNV 585

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+N L  GL +  ++  AL  F+ M+      +  TY   I+GLCK     +A   ++ 
Sbjct: 586 YTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQE 645

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + +   Y  +I GL KSG +  A  LF        + D  +YN MI GL    +
Sbjct: 646 MQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANR 705

Query: 312 MDKAHDLF 319
              A+ LF
Sbjct: 706 ALDAYQLF 713



 Score =  164 bits (416), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 173/353 (49%), Gaps = 2/353 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN II  LCK G V+ A  +   MK   + P+V T N +I  LC A   +EA  +
Sbjct: 268 PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSI 327

Query: 74  FFEMMDQGV-QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           F E MD  V  P   TF  ++D L K G++D+A R+ + M+  D  PN   Y++L+  F 
Sbjct: 328 F-EGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFF 386

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +     +++  M   GC  D +  N  ++   K  E E+  +L+ E+ ++G  P   
Sbjct: 387 KCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTR 446

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y+ L   L +        +L+  M+      DT  YNT IDG CK+G + +A +L   +
Sbjct: 447 SYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 506

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +     +  Y  ++DGL K  RL+ A  LF       +  + V Y+ +I G    G++
Sbjct: 507 KTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRV 566

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           D+A+ +  +M +  + PNV  +  L+ G V+  + ++ +     MK+ K  P+
Sbjct: 567 DEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPN 619



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 179/364 (49%), Gaps = 5/364 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMK--GENINPDVVTYNSLIHGLCHANDWNEA 70
           +P    Y T+I  L + G  D+  ALF QM+  G  +N  ++T  +LI         + A
Sbjct: 58  RPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLT--TLIRVFSREGRVDAA 115

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             L  EM        +V +NV +D   K GK+D A +    M    + P+  TY+++M  
Sbjct: 116 LSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGV 175

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C   +++ A E+F  ME         +YN +I GY    + +EA SL     +KG  P+
Sbjct: 176 LCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPS 235

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VV YN +   L +  + + AL++FEEM+RD +  +  TYN  I  LCK G +  A ++  
Sbjct: 236 VVAYNCILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRD 294

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +       +++  N +ID LCK+ +L+ A  +F  +  +V   D  T+  +I GL   G
Sbjct: 295 AMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQG 354

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++D A+ ++  M +    PNV+++ +LI  F + ++     ++  +M      PD  +++
Sbjct: 355 RVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLN 414

Query: 371 MVVD 374
             +D
Sbjct: 415 TYMD 418



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 169/357 (47%), Gaps = 1/357 (0%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
            T+I    +EG VD A +L  +MK    + D+V YN  I         + A + F EM  
Sbjct: 100 TTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKA 159

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
            G+ P  VT+  +M  LCK  ++DEA  + + M Q    P A+ Y+T++ G+   GK + 
Sbjct: 160 NGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDE 219

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A  L     + GC    V+YN ++    K  + ++AL ++ EM    + P + TYN +  
Sbjct: 220 AYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIG 278

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
            L +   VE A K+ + M+   +  +  T N  ID LCK   + EA  +F  +    C  
Sbjct: 279 MLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSP 338

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           D   +  LIDGL K GR++ A  ++  +     + +VV Y  +I       + +  H ++
Sbjct: 339 DGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMY 398

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +M  +  +P++++  T +    +  +  K   L  ++K +  +PD    S+++  L
Sbjct: 399 KEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSL 455



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 149/336 (44%), Gaps = 1/336 (0%)

Query: 41  QMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
           +M      P   T   L+     +    EA  L   M     +P+   +  ++  L + G
Sbjct: 16  EMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVG 75

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           + D    L + M +     N    +TL+  F   G+++ A  L   M+S     D V YN
Sbjct: 76  ESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYN 135

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           + I+ + K  +V+ A   + EM + G+ P  VTY ++   L + ++++ A+++FE+M+++
Sbjct: 136 VCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQN 195

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
                   YNT I G    G   EA  L        C   + AYNC++  L K G+ + A
Sbjct: 196 RQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKA 255

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           L +F  + R  +  ++ TYNI+I  LC  G ++ A  +   M+E  + PNV     +I  
Sbjct: 256 LRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDR 314

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +  K  +   +   M  K   PD +    ++D L
Sbjct: 315 LCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGL 350



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 147/316 (46%), Gaps = 1/316 (0%)

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           +    +++  +++  EM   G  P+  T   ++    K+ K+ EA  LL +M     RP 
Sbjct: 1   MVRTRNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPA 60

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
              Y+TL+      G+ +R   LF  M+ +G + +      LI  + +   V+ ALSL  
Sbjct: 61  FSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLD 120

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           EM S      +V YN       ++ +V+ A K F EM+ + +  D  TY + +  LCK  
Sbjct: 121 EMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKAN 180

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            + EAVE+F  +   +      AYN +I G   +G+ + A  L      +  +  VV YN
Sbjct: 181 RLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYN 240

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            ++  L   G+ DKA  +F +M+ +A+ PN+  +  +I    +        ++   MKE 
Sbjct: 241 CILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEA 299

Query: 361 KVMPDASIVSMVVDLL 376
            + P+   +++++D L
Sbjct: 300 GLFPNVRTINIMIDRL 315



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 52/94 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPNT+TY  +I GL K G V +A +LF + +     PD  +YN++I GL  AN   +A +
Sbjct: 652 KPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQ 711

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           LF E   +G      T   ++D L K   +++A+
Sbjct: 712 LFEETRLKGCSIHTKTCVALLDALHKAECLEQAA 745


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 192/364 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +  ++  +I G C+ G +DK+  L   ++   ++P+VV Y +LI G C   D   A+ 
Sbjct: 159 KFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARL 218

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F +M + G+  +  TF V+++ L K G   +   L + M    + PN +TY+ LM+ +C
Sbjct: 219 FFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYC 278

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GKI RA +LF  M   G + + V+YN LI G C+ + V EA  L  +M    + P ++
Sbjct: 279 GEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLI 338

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  ++  ++ A  L ++++ + ++    TYN  I+G  K G      +L R +
Sbjct: 339 TYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREM 398

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                         LID   +   +E A +++ S+ +  LV DV  Y ++IHGLC  G M
Sbjct: 399 EGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNM 458

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            ++  LF  M E  V P+ +I+ T+IHG+ + +   + + LL +M+ K ++P+ +  S +
Sbjct: 459 KESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSI 518

Query: 373 VDLL 376
           + +L
Sbjct: 519 IGVL 522



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 113/329 (34%), Positives = 177/329 (53%), Gaps = 2/329 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE+G+V   N  T+  +I+GL K+G       LF +MK   + P++ TYN L++  C   
Sbjct: 224 GEMGLVA--NQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEG 281

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
               A  LF EM ++GV+ +VVT+N ++  +C+  ++ EA +L+D M +  V PN  TY+
Sbjct: 282 KICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYN 341

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+ GFC  G +++A  L   ++S G     V+YNILI GY K    +    L REM  +
Sbjct: 342 TLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGR 401

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           GI P+ VT   L      + ++E A +++  M++  +  D   Y   I GLC  G + E+
Sbjct: 402 GISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKES 461

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            +LFR++G +  E     YN +I G CK      AL L R +  + LV +V +Y+ +I  
Sbjct: 462 SKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGV 521

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           LC DG+ ++A  L   M E  + P+  I 
Sbjct: 522 LCKDGKWEEAEVLLDKMIELQLKPSASIL 550



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 184/359 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y T+IDG CK G +++A+  F +M    +  +  T+  LI+GL       +   L
Sbjct: 195 PNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDL 254

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M   G+ P++ T+N +M+E C  GK+  A  L D M +R V  N  TY+TL+ G C 
Sbjct: 255 FEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCR 314

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++  AE+L   M+      + ++YN LI G+C    +++A SL  ++ S G+ P++VT
Sbjct: 315 EERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVT 374

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +    +    L  EM+   ++    T    ID   +   + +A +++ ++ 
Sbjct: 375 YNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSME 434

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+  Y  LI GLC  G ++ + +LFRS+    +    V YN MIHG C +    
Sbjct: 435 KFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSY 494

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           +A  L  +ME   + PNV  + ++I    +  K  +   LL KM E ++ P ASI++M+
Sbjct: 495 RALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 181/360 (50%), Gaps = 5/360 (1%)

Query: 16  TVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            + Y +II+   K   +DKA   F +M  KG    P++  +NSL+  L  +N + +A  L
Sbjct: 93  ALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNI--FNSLLGSLVRSNCFEKA-WL 149

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           FF  + + V+  V +F +++   C+NG +D++ +LL L+    + PN   Y+TL+DG C 
Sbjct: 150 FFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCK 209

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G I RA   F  M  MG   +  ++ +LING  K    ++   L+ +M   G+ P + T
Sbjct: 210 NGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYT 269

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L        ++  A  LF+EM+   V A+  TYNT I G+C+   + EA +L   + 
Sbjct: 270 YNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMK 329

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 ++  YN LI G C  G L+ A  L   L    L   +VTYNI+I G    G   
Sbjct: 330 KAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWK 389

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
              DL  +ME   ++P+ +    LI  +VR+ +  K  ++   M++  ++PD  +  +++
Sbjct: 390 GVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLI 449



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 173/333 (51%), Gaps = 4/333 (1%)

Query: 45  ENINPDVVT---YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           +N NP + T   Y S+I+    +   ++A   F EM+D+G+      FN ++  L ++  
Sbjct: 84  QNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNC 143

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
            ++A    + + +R V+ + +++  ++ G C  G ++++ +L G ++ MG   + V Y  
Sbjct: 144 FEKAWLFFNELKER-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTT 202

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LI+G CKN ++E A   + +M   G+     T+  L  GLF+    +    LFE+M+ + 
Sbjct: 203 LIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKING 262

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           +  +  TYN  ++  C  G I  A +LF  +     E ++  YN LI G+C+  R+  A 
Sbjct: 263 LFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAE 322

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           +L   + +  +  +++TYN +I G C+ G +DKA  L   ++ N ++P+++ +  LI G+
Sbjct: 323 KLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGY 382

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +      V +L  +M+ + + P     ++++D
Sbjct: 383 SKAGNWKGVADLAREMEGRGISPSKVTCTVLID 415



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/222 (22%), Positives = 98/222 (44%), Gaps = 22/222 (9%)

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST----- 228
           +ALSL+   + +G + T  + + L   L + H++ HA  L  ++  + +++   T     
Sbjct: 20  QALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLL 79

Query: 229 ----------------YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
                           Y + I+   K+  + +A+  F  +           +N L+  L 
Sbjct: 80  HHLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLV 139

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           +S   E A   F  L  RV   DV ++ IMI G C +G +DK+  L   +++  ++PNV+
Sbjct: 140 RSNCFEKAWLFFNELKERVKF-DVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVV 198

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           I+ TLI G  +     +      KM E  ++ +    +++++
Sbjct: 199 IYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLIN 240



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 2/87 (2%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE+ V  +P+ V YNT+I G CKE    +A  L  +M+ + + P+V +Y+S+I  LC   
Sbjct: 469 GEMHV--EPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDG 526

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVI 92
            W EA+ L  +M++  ++PS    N+I
Sbjct: 527 KWEEAEVLLDKMIELQLKPSASILNMI 553


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 194/393 (49%), Gaps = 44/393 (11%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN V+Y T+I  +C+ G V + + L      E   P V  YN+LI+GLC   D+    
Sbjct: 211 CCPNAVSYTTVISSMCEVGMVKEGRQL-----AERFEPVVSVYNALINGLCKERDYKGGV 265

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT-------- 123
            L  EM+++G+ P+V++++ +++EL  +G+++ A  LL  M++R   PN  T        
Sbjct: 266 ELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGC 325

Query: 124 ----------------------------YSTLMDGFCLTGKINRAEELFGSMESMGCKHD 155
                                       Y+TL+ GFC  G I++A  +F  ME +GC  +
Sbjct: 326 FVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPN 385

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
             +Y  LING+ K   +E A+ ++ +M++ G  P VV Y ++   L    + + A  L E
Sbjct: 386 IRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIE 445

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL-GILKCELDIQAYNCLIDGLCKS 274
            M +++ A    T+N FI GLC  G +  A ++FR +    +C  +I  YN L+DGL K+
Sbjct: 446 IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKA 505

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            R+E A  L R +  R +     TYN ++HG CN G    A  L   M  N  +P+ I  
Sbjct: 506 NRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITM 565

Query: 335 VTLIHGFVRINKPSKVIELLHKMK--EKKVMPD 365
             +I  + +  K  + +++L  +    +K  PD
Sbjct: 566 NMIILAYCKQGKAERAVQMLDLVSCGRRKWRPD 598



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 166/354 (46%), Gaps = 6/354 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+   YN ++D L  E  +     ++  MK +   P+V TYN L+  LC  N  + AK
Sbjct: 141 CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAK 200

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  EM ++G  P+ V++  ++  +C+ G + E  +L +        P    Y+ L++G 
Sbjct: 201 KLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAE-----RFEPVVSVYNALINGL 255

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C         EL   M   G   + +SY+ LIN    + ++E A SL  +M+ +G  P +
Sbjct: 256 CKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNI 315

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            T ++L  G F       AL ++ +M R   +  +   YNT + G C +G I +AV +F 
Sbjct: 316 HTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFL 375

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +  + C  +I+ Y  LI+G  K G LE A+ ++  +       +VV Y  M+  LC   
Sbjct: 376 HMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHS 435

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           +  +A  L   M +   AP+V  F   I G     +     ++  +M+++   P
Sbjct: 436 KFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCP 489



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 154/288 (53%), Gaps = 4/288 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G   +PN V YNT++ G C  G +DKA ++FL M+    +P++ TY SLI+G        
Sbjct: 344 GFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLE 403

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A  ++ +M+  G  P+VV +  +++ LC++ K  EA  L+++M + +  P+  T++  +
Sbjct: 404 GAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFI 463

Query: 129 DGFCLTGKINRAEELFGSMESM-GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
            G C  G+++ AE++F  ME    C  + V+YN L++G  K   +EEA  L RE+  +G+
Sbjct: 464 KGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGV 523

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           + +  TYNTL  G         AL+L  +M  +  + D  T N  I   CK G    AV+
Sbjct: 524 EWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQ 583

Query: 248 LFR--TLGILKCELDIQAYNCLIDGLCKSGRLEIALELF-RSLPRRVL 292
           +    + G  K   D+ +Y  +I GLC+S   E  + LF R +  R++
Sbjct: 584 MLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERII 631



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 169/341 (49%), Gaps = 14/341 (4%)

Query: 30  GFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTF 89
           G  ++A  +F ++K    +P V  YN ++  L   N       ++ +M   G +P+V T+
Sbjct: 124 GLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTY 183

Query: 90  NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
           NV++  LCKN K+D A +LL  M  +   PNA +Y+T++   C  G +    +L    E 
Sbjct: 184 NVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEP 243

Query: 150 MGCKHDDVS-YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 208
           +      VS YN LING CK ++ +  + L  EMV KGI P V++Y+TL   L    Q+E
Sbjct: 244 V------VSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIE 297

Query: 209 HALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF----RTLGILKCELDIQAY 264
            A  L  +M +     +  T ++ + G    G   +A++++    R  G+   + ++ AY
Sbjct: 298 LAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGL---QPNVVAY 354

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
           N L+ G C  G ++ A+ +F  +       ++ TY  +I+G    G ++ A  ++  M  
Sbjct: 355 NTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLT 414

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +   PNV+++ +++    R +K  +   L+  M ++   P 
Sbjct: 415 SGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPS 455



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 146/361 (40%), Gaps = 76/361 (21%)

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
           +TF V++ +L  +G++D    LL  M  +    +   + +++  +   G   RA E+F  
Sbjct: 76  LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 135

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           ++  GC      YN +++       ++    +YR+M   G +P V TYN L   L + ++
Sbjct: 136 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 195

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           V+ A KL  EM       +  +Y T I  +C+ G + E  +L         E  +  YN 
Sbjct: 196 VDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERF-----EPVVSVYNA 250

Query: 267 LIDGLCK-----------------------------------SGRLEIALELFRSLPRR- 290
           LI+GLCK                                   SG++E+A  L   + +R 
Sbjct: 251 LINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRG 310

Query: 291 -----------------------------------VLVADVVTYNIMIHGLCNDGQMDKA 315
                                               L  +VV YN ++ G C+ G +DKA
Sbjct: 311 CHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKA 370

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
             +FL MEE   +PN+  + +LI+GF +       + + +KM      P+  + + +V+ 
Sbjct: 371 VSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEA 430

Query: 376 L 376
           L
Sbjct: 431 L 431



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 94/181 (51%), Gaps = 3/181 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEA 70
           C P+  T+N  I GLC  G +D A+ +F QM+ +    P++VTYN L+ GL  AN   EA
Sbjct: 452 CAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEA 511

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             L  E+  +GV+ S  T+N ++   C  G    A +L+  M+     P+  T + ++  
Sbjct: 512 YGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILA 571

Query: 131 FCLTGKINRAEELFG--SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +C  GK  RA ++    S      + D +SY  +I G C++   E+ + L+  M+S+ I 
Sbjct: 572 YCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERII 631

Query: 189 P 189
           P
Sbjct: 632 P 632



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/192 (20%), Positives = 87/192 (45%), Gaps = 1/192 (0%)

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGI-KPTVVTYNTLFLGLFEIHQVEHALK 212
           H ++  + ++    +   V  AL  ++ + +  + K T +T+  +   L    QV+    
Sbjct: 37  HAEIKESAVLKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQY 96

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           L ++M+          + + I    + G    AVE+F  +    C+  ++ YN ++D L 
Sbjct: 97  LLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLL 156

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
              R+++   ++R + R     +V TYN+++  LC + ++D A  L ++M      PN +
Sbjct: 157 GENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAV 216

Query: 333 IFVTLIHGFVRI 344
            + T+I     +
Sbjct: 217 SYTTVISSMCEV 228


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 187/359 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N VT++T +D  CKEG V +A  LF QM+   +  +  TY  LI G C A   ++A  L 
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL 351

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ QGV  +VVT+ V++D LCK  K+ EA  +L +M +  VR N   Y+TL+ G  + 
Sbjct: 352 DEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMN 411

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
               +A  L   M++ G + D   Y  LI G C   +++EA SL  +M   G++P  + Y
Sbjct: 412 KNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIY 471

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            T+    F+  +V  A+ + +++       +  TY   IDGLCK G I EA+  F  +  
Sbjct: 472 TTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRD 531

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L  + ++QAY  L+DGLCK+G L  A++LF  +  + +  D V Y  ++ G    G +  
Sbjct: 532 LGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHD 591

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A  L   M ++ +  ++  +   I GF  +N   +  E+  +M    + PD ++ + ++
Sbjct: 592 AFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/361 (32%), Positives = 183/361 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T+N +ID LCKEG + +A++LF +MK     PDVVT+NSLI G     + +E ++L
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G +  VVT+N +++  CK G+M+ A      M +  V  N  T+ST +D FC 
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A +LF  M   G   ++ +Y  LI+G CK   +++A+ L  EMV +G+   VVT
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +  +V  A  +   M++  V A+   Y T I G   N    +A+ L   + 
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               ELDI  Y  LI GLC   +L+ A  L   +    L  + + Y  M+      G++ 
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  +   + ++   PNVI +  LI G  +     + I   +KM++  + P+    + +V
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545

Query: 374 D 374
           D
Sbjct: 546 D 546



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 190/354 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CK + VTYN +I+  CK G ++ A   F  MK E +  +VVT+++ +   C      EA 
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +LF +M  +G+  +  T+  ++D  CK G++D+A  LLD MV++ V  N  TY+ L+DG 
Sbjct: 314 KLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGL 373

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K+  AE++   ME  G + +++ Y  LI+G+  NK  E+AL L  EM +KG++  +
Sbjct: 374 CKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDI 433

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y  L  GL  +H+++ A  L  +M    +  +   Y T +D   K+G + EA+ + + 
Sbjct: 434 SLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQK 493

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + ++  Y  LIDGLCK+G ++ A+  F  +    L  +V  Y  ++ GLC +G 
Sbjct: 494 ILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGC 553

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +++A  LF +M    ++ + +++  L+ G+++         L  KM +  +  D
Sbjct: 554 LNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLD 607



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 183/363 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT+N++IDG  K G +D+ + L  +M+      DVVTYN+LI+  C       A 
Sbjct: 219 CLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAY 278

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             F  M  +GV  +VVTF+  +D  CK G + EA +L   M  R +  N FTY+ L+DG 
Sbjct: 279 GYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGT 338

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A  L   M   G   + V+Y +L++G CK ++V EA  + R M   G++   
Sbjct: 339 CKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANE 398

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           + Y TL  G F     E AL L  EM+   +  D S Y   I GLC    + EA  L   
Sbjct: 399 LLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTK 458

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     E +   Y  ++D   KSG++  A+ + + +       +V+TY  +I GLC  G 
Sbjct: 459 MDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGS 518

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A   F  M +  + PNV  +  L+ G  +    ++ ++L ++M  K +  D  + + 
Sbjct: 519 IDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTA 578

Query: 372 VVD 374
           ++D
Sbjct: 579 LLD 581



 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 107/319 (33%), Positives = 174/319 (54%), Gaps = 4/319 (1%)

Query: 55  NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
           ++L+  L      ++A R    + +  V P+  T N I+  L +    D + RL+  + +
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLAR----DRSGRLVRRLFE 181

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
           +   PN FT++ ++D  C  G++  A  LF  M+ MGC  D V++N LI+GY K  E++E
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
              L  EM   G K  VVTYN L     +  ++E A   F  M+R+ V A+  T++TF+D
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
             CK G + EA++LF  + +    L+   Y CLIDG CK+GRL+ A+ L   + R+ +  
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           +VVTY +++ GLC + ++ +A D+   ME+  V  N +++ TLIHG        K + LL
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421

Query: 355 HKMKEKKVMPDASIVSMVV 373
            +MK K +  D S+   ++
Sbjct: 422 SEMKNKGLELDISLYGALI 440



 Score =  174 bits (440), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 183/390 (46%), Gaps = 39/390 (10%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           +T++  L   G +D A     +++   + P+  T N ++  L         +RLF    +
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLF----E 181

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
           Q   P+V TFN+++D LCK G++ EA  L   M +    P+  T+++L+DG+   G+++ 
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
            E+L   M   GCK D V+YN LIN +CK   +E A   +  M  +G+   VVT++T   
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
              +   V  A+KLF +M+   +A +  TY   IDG CK G + +A+ L   +      L
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 260 DIQAYNCLIDGLCKSGRL-----------------------------------EIALELF 284
           ++  Y  L+DGLCK  ++                                   E AL L 
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
             +  + L  D+  Y  +I GLCN  ++D+A  L   M+E+ + PN II+ T++    + 
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481

Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            K  + I +L K+ +    P+      ++D
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNVITYCALID 511



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 138/280 (49%), Gaps = 4/280 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + N + Y T+I G       +KA  L  +MK + +  D+  Y +LI GLC+ +  +EAK 
Sbjct: 395 RANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKS 454

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M + G++P+ + +  +MD   K+GK+ EA  +L  ++    +PN  TY  L+DG C
Sbjct: 455 LLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLC 514

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G I+ A   F  M  +G   +  +Y  L++G CKN  + EA+ L+ EMV KG+    V
Sbjct: 515 KAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKV 574

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y  L  G  +   +  A  L  +M    +  D   Y  FI G C    + EA E+F  +
Sbjct: 575 VYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 634

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIAL----ELFRSLP 288
                  D   YNCLI    K G LE A+    E+ R LP
Sbjct: 635 IGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLP 674


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 200/384 (52%), Gaps = 20/384 (5%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           ++GV   P+  TY  +ID  CK G +++A++ F +M+    +P+VVTY +L+H    +  
Sbjct: 480 KVGV--NPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQ 537

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD---------- 116
             +A  +F  M+     P+ +T++ ++D LCK G++ +A  +   ++             
Sbjct: 538 LYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFE 597

Query: 117 ------VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
                 + PN  TY  L++G C   K++ A +L  +M + GC+ + + Y+ L++G+CK  
Sbjct: 598 GKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVG 657

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
           E++ A  ++  M   G  P+V TY +L   +F+  +++ A+K+  +M +D    +  TY 
Sbjct: 658 EIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYT 717

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
             +DGLCK G   +A+ L   +    C  ++  Y  LIDGL K+G+++  LELF  +  +
Sbjct: 718 AMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTK 777

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
               + VTY I+I+  C  G +D AH L  +M++      +  + T + GF +    S  
Sbjct: 778 GCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLAS-- 835

Query: 351 IELLHKMKEKKVMPDASIVSMVVD 374
           + LL +M+     P A +  M++D
Sbjct: 836 LGLLEEMESHDTAPIAPVYGMLID 859



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 203/408 (49%), Gaps = 54/408 (13%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKG----------------ENINPDV 51
           +G  C PN +TY+ +IDGLCK G + KA  ++ ++ G                + I+P+V
Sbjct: 549 VGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNV 608

Query: 52  VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL 111
           VTY +L++GLC A   ++A  L   M+  G +P+ + ++ ++D  CK G++D A  +   
Sbjct: 609 VTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLR 668

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           M +    P+  TY++L+D     G+++ A ++   M    C  + V+Y  +++G CK  E
Sbjct: 669 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGE 728

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
            E+AL+L   M  KG  P VVTY  L  GL +  +V+  L+LF +M+    A +  TY  
Sbjct: 729 TEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRI 788

Query: 232 FIDGLCKNG---------------YIVEAVELFRT------------LGILKCELDIQ-- 262
            I+  C  G               +  + ++ +RT            LG+L+ E++    
Sbjct: 789 LINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLE-EMESHDT 847

Query: 263 -----AYNCLIDGLCKSGRLEIALELFRSL---PRRVLVADVVTYNIMIHGLCNDGQMDK 314
                 Y  LID   K+GRLE ALEL + +      + +A    +  +I  LC   Q+++
Sbjct: 848 APIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEE 907

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           A  L+ +M    + P++  FV L+ G +  NK ++ ++L + + ++ V
Sbjct: 908 AVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGV 955



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 187/387 (48%), Gaps = 22/387 (5%)

Query: 12  CKPNTVTYNTIIDGLCKEG------FVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           C P  V YN  I  +C          +D A+ ++ +M   +   + +   +    LC   
Sbjct: 372 CPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVG 431

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            + +A ++  EMM +G  P   T+  ++  LC+  ++D+A  L   M +  V P+ +TY+
Sbjct: 432 KFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYT 491

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+D FC  G I +A+  F  M S GC  + V+Y  L++ Y K+K++ +A  ++  MV  
Sbjct: 492 ILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGD 551

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKL----------------FEEMQRDDVAADTSTY 229
              P  +TY+ L  GL +  +++ A ++                FE    D ++ +  TY
Sbjct: 552 ACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTY 611

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
              ++GLCK   + +A +L   +    CE +   Y+ L+DG CK G ++ A E+F  + +
Sbjct: 612 GALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTK 671

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
              +  V TY  +I  +  DG++D A  +   M +++  PNV+ +  ++ G  +  +  K
Sbjct: 672 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEK 731

Query: 350 VIELLHKMKEKKVMPDASIVSMVVDLL 376
            + LL  M++K   P+    + ++D L
Sbjct: 732 ALNLLSLMEKKGCSPNVVTYTALIDGL 758



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/414 (24%), Positives = 171/414 (41%), Gaps = 60/414 (14%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T  +    LCKEG    A  L   ++ E+   D V    +I GL  A+ +NEA      M
Sbjct: 241 TVGSFAQALCKEGRWGDALDL---LEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRM 297

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
                 P+VVT+  ++    K  ++    R++++M+     P+   +++L+  +C     
Sbjct: 298 RCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDY 357

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV------------------------- 172
             A +LF  M + GC    V YNI I   C  +E+                         
Sbjct: 358 AYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNK 417

Query: 173 ----------------EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
                           E+A  + +EM+ KG  P   TY  +   L +  +V+ A  LF+E
Sbjct: 418 INTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQE 477

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M++  V  D  TY   ID  CK G I +A   F  +    C  ++  Y  L+    KS +
Sbjct: 478 MKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQ 537

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM-------------- 322
           L  A ++F  +       + +TY+ +I GLC  G++ KA +++  +              
Sbjct: 538 LYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFE 597

Query: 323 --EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             + + ++PNV+ +  L++G  +  K S   +LL  M      P+  +   +VD
Sbjct: 598 GKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVD 651



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 164/399 (41%), Gaps = 46/399 (11%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N ++   C +G   +A     ++K     P  VTYN+L+  L  A     A R+  EM  
Sbjct: 173 NVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSA 232

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR--------------------- 118
            G      T       LCK G+  +A   LDL+ + D +                     
Sbjct: 233 SGFCMDRSTVGSFAQALCKEGRWGDA---LDLLEREDFKLDTVLCTQMISGLMEASLFNE 289

Query: 119 --------------PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
                         PN  TY TL+ GF    ++   + +   M + GC      +N L++
Sbjct: 290 AMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVH 349

Query: 165 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG-------LFEIHQVEHALKLFEEM 217
            YC  ++   A  L+  M + G  P  V YN +F+G       L     ++ A K++EEM
Sbjct: 350 TYCNAEDYAYAYKLFNRMNTCGCPPGYVVYN-IFIGSICGREELPNPELLDLAEKVYEEM 408

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
                  +      F   LC  G   +A ++ + +       D   Y  +I  LC++ R+
Sbjct: 409 LVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRV 468

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A  LF+ + +  +  DV TY I+I   C  G +++A   F +M     +PNV+ +  L
Sbjct: 469 DKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTAL 528

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +H +++  +  +  ++ H+M      P+A   S ++D L
Sbjct: 529 LHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGL 567



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 119/260 (45%), Gaps = 39/260 (15%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTY  ++DGLCK G  +KA  L   M+ +  +P+VVTY +LI GL  A   +   
Sbjct: 709 CNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGL 768

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNG------------------KMDEASR------ 107
            LF +M  +G  P+ VT+ ++++  C  G                  K  +  R      
Sbjct: 769 ELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGF 828

Query: 108 ---------LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
                    LL+ M   D  P A  Y  L+D F   G++  A EL   M  +    +  S
Sbjct: 829 SKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMAS 888

Query: 159 YNI---LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
            ++   LI   C + +VEEA++LY EM  +GI P +  +  L  GL E ++   AL+L  
Sbjct: 889 KDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCY 948

Query: 216 EMQRDDVAADTSTYNTFIDG 235
            + ++ V  +    N F DG
Sbjct: 949 GICQEGVNWEG---NKFCDG 965


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 187/362 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  T+N +I  LC +G V +A+ +   +      PD  TY SLI G C   + + A  
Sbjct: 199 RPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFE 258

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  M+  G  P+ VT++ +++ LC  G+++EA  +L+ M+ + + P    Y+  +   C
Sbjct: 259 MFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLC 318

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+   A +L G M+  GC  +  +Y  LI+G  ++ + E A+ +Y +M++ G+ PT V
Sbjct: 319 DAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAV 378

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L   L+   + E AL +FE M   D   +T TYN  I G C  GYI +A  +F  +
Sbjct: 379 TYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQM 438

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++  YN +I    K G +  A+ L   +    L  D  TY  +I G    G++
Sbjct: 439 LKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKL 498

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           + A  LF +M E+ ++PNV+ +  +I+G++ + K    + L  KM E   +P +   +M+
Sbjct: 499 EHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMM 558

Query: 373 VD 374
           + 
Sbjct: 559 IS 560



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 195/430 (45%), Gaps = 80/430 (18%)

Query: 12  CKPNTVTYNTIIDGLCKEG-----------FVDK------------------------AK 36
           C PN+VTY+ +I+GLC EG            +DK                        A 
Sbjct: 268 CDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAV 327

Query: 37  ALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
            L  +MK     P+V TY +LI GL     +  A  ++ +M+  G+ P+ VT++ ++++L
Sbjct: 328 KLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQL 387

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
              G+ + A  + + M+  D  PN  TY+ ++ GFC  G I +A  +F  M   G   + 
Sbjct: 388 YVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNV 447

Query: 157 VSYNI-----------------------------------LINGYCKNKEVEEALSLYRE 181
           ++YNI                                   LI+G+ +  ++E A SL+ E
Sbjct: 448 ITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNE 507

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           MV  GI P VVTYN +  G   + +V+ AL LF +M        + TYN  I G  K   
Sbjct: 508 MVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNR 567

Query: 242 IVEAVELFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           I EA      +   G+L    ++  Y   IDGLCK+GR  +A ++F  + +R    ++ T
Sbjct: 568 ISEAENFCGKMVKQGLLP---NVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCT 624

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y+ +I GLC +GQ + A  L     ++   PNV  + TL+ G     +  +  +L+  MK
Sbjct: 625 YSSLIDGLCQEGQAEDAERLL----DDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMK 680

Query: 359 EKKVMPDASI 368
           +K + P   I
Sbjct: 681 KKGLQPSEEI 690



 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 185/363 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T TY ++I G CK G +D A  +F +M  +  +P+ VTY++LI+GLC      EA  +
Sbjct: 235 PDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDM 294

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+D+G++P+V  + + +  LC  G+  EA +LL  M +R   PN  TY+ L+ G   
Sbjct: 295 LEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSR 354

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK   A  ++  M + G     V+Y+ LIN        E AL+++  M+S    P   T
Sbjct: 355 DGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTET 414

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  G   I  ++ A  +F++M +   + +  TYN  I    K GY+  A+ L   + 
Sbjct: 415 YNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMK 474

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +LD   Y  LI G  + G+LE A  LF  +    +  +VVTYN +I+G     ++D
Sbjct: 475 GNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVD 534

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  LF  M E+   P+   +  +I GF + N+ S+      KM ++ ++P+    +  +
Sbjct: 535 DALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFI 594

Query: 374 DLL 376
           D L
Sbjct: 595 DGL 597



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 180/363 (49%), Gaps = 4/363 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNT TYN II G C  G++ KA A+F QM     +P+V+TYN +IH        N A RL
Sbjct: 410 PNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRL 469

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   G++    T+  ++    + GK++ A  L + MV+  + PN  TY+ +++G+  
Sbjct: 470 LEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLT 529

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K++ A  LF  M   G      +YN++I+G+ K   + EA +   +MV +G+ P V+T
Sbjct: 530 VAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVIT 589

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +   GL +  +   A K+F EM++ D   +  TY++ IDGLC+ G   +A  L     
Sbjct: 590 YTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD-- 647

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              CE ++  Y  L+ GLC  GR   A +L  S+ ++ L      Y  ++ G C + +++
Sbjct: 648 --GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVE 705

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  +F  M      P +  +  LI    + N   K   +   M +K    D  + ++++
Sbjct: 706 SALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLL 765

Query: 374 DLL 376
           D L
Sbjct: 766 DGL 768



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 170/347 (48%), Gaps = 4/347 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +TYN II    K+G+++ A  L   MKG  +  D  TY +LI G         A  L
Sbjct: 445 PNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSL 504

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM++ G+ P+VVT+N I++      K+D+A  L   MV+    P++ TY+ ++ GF  
Sbjct: 505 FNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSK 564

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           T +I+ AE   G M   G   + ++Y   I+G CKN     A  ++ EM  +   P + T
Sbjct: 565 TNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCT 624

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y++L  GL +  Q E A +L +    D    +  TY T + GLC  G   EA +L  ++ 
Sbjct: 625 YSSLIDGLCQEGQAEDAERLLD----DGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMK 680

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +   + Y  L+ G CK+  +E AL++F S+        +  Y  +I  LC      
Sbjct: 681 KKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQ 740

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           KA  +F  M +     + +++  L+ G ++  +    +ELLH M+ +
Sbjct: 741 KAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESR 787



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 156/292 (53%), Gaps = 6/292 (2%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
            + ++ EM++ G++P++ TFN ++  LC  GK+ EA  ++  +      P+ FTY++L+ 
Sbjct: 186 GRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLII 245

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C  G ++ A E+F  M   GC  + V+Y+ LING C    +EEA+ +  EM+ KGI+P
Sbjct: 246 GHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEP 305

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           TV  Y    + L +  +   A+KL  +M++     +  TY   I GL ++G    A+ ++
Sbjct: 306 TVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVY 365

Query: 250 RTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
             +   G++   +    Y+ LI+ L   GR E AL +F  +     + +  TYN++I G 
Sbjct: 366 HKMLADGLVPTAV---TYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGF 422

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           C+ G + KA  +F  M +   +PNVI +  +IH + +    +  + LL  MK
Sbjct: 423 CSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMK 474



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 169/324 (52%), Gaps = 9/324 (2%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           M  GNG      K +T TY  +I G  + G ++ A +LF +M    I+P+VVTYN++I+G
Sbjct: 472 MMKGNG-----LKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIING 526

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
                  ++A  LF++M++ G  PS  T+N+++    K  ++ EA      MV++ + PN
Sbjct: 527 YLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPN 586

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY++ +DG C  G+ + A ++F  M+      +  +Y+ LI+G C+  + E+A     
Sbjct: 587 VITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA----E 642

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            ++  G +P V TY TL  GL    +   A +L E M++  +      Y   + G CKN 
Sbjct: 643 RLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNL 702

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            +  A+++F ++     +  +  Y  LI  LCK+   + A  +F+++ ++   +D V + 
Sbjct: 703 EVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWT 762

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEE 324
           +++ GL  +G+ D + +L   ME 
Sbjct: 763 VLLDGLLKEGETDLSLELLHVMES 786



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 130/281 (46%), Gaps = 31/281 (11%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTYN II+G      VD A ALF +M      P   TYN +I G    N  +EA+  
Sbjct: 515 PNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENF 574

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+ QG+ P+V+T+   +D LCKNG+   A ++   M +RD  PN  TYS+L+DG C 
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQ 634

Query: 134 TGKINRAEELFG-------------------------------SMESMGCKHDDVSYNIL 162
            G+   AE L                                 SM+  G +  +  Y  L
Sbjct: 635 EGQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRAL 694

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           + G CKN EVE AL ++  MV+ G +P +  Y  L   L + +  + A  +F+ M +   
Sbjct: 695 LVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHW 754

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQA 263
            +D   +   +DGL K G    ++EL   +    C L+ Q 
Sbjct: 755 NSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQT 795



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 127/264 (48%)

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           M+   +RPN FT++ ++   C  GK+  AE + G +   G   D  +Y  LI G+CKN  
Sbjct: 193 MLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGN 252

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           ++ A  ++  MV  G  P  VTY+ L  GL    ++E A+ + EEM    +      Y  
Sbjct: 253 LDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTI 312

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            I  LC  G   EAV+L   +    C  ++Q Y  LI GL + G+ E+A+ ++  +    
Sbjct: 313 PIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADG 372

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           LV   VTY+ +I+ L  +G+ + A  +F  M  +   PN   +  +I GF  I    K  
Sbjct: 373 LVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKAT 432

Query: 352 ELLHKMKEKKVMPDASIVSMVVDL 375
            +  +M +    P+    ++++ +
Sbjct: 433 AIFDQMLKAGPSPNVITYNIIIHI 456



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 124/243 (51%), Gaps = 4/243 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +TY + IDGLCK G    A  +F +MK  +  P++ TY+SLI GLC      +A+RL
Sbjct: 585 PNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERL 644

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
               +D G +P+V T+  ++  LC  G+  EA +L++ M ++ ++P+   Y  L+ G C 
Sbjct: 645 ----LDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCK 700

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++  A ++F SM + G +     Y  LI   CK    ++A  +++ M+ K      V 
Sbjct: 701 NLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVV 760

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  GL +  + + +L+L   M+  +   +  T       L   G  +E  ++ + LG
Sbjct: 761 WTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSALGCSIEIPQISKQLG 820

Query: 254 ILK 256
           I+K
Sbjct: 821 IVK 823



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 99/199 (49%)

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           +Y EM++ GI+P + T+N +   L    +V+ A  +   +       DT TY + I G C
Sbjct: 189 VYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHC 248

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           KNG +  A E+F  +    C+ +   Y+ LI+GLC  GRLE A+++   +  + +   V 
Sbjct: 249 KNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVH 308

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            Y I I  LC+ G+  +A  L   M++    PNV  +  LI G  R  K    I + HKM
Sbjct: 309 AYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKM 368

Query: 358 KEKKVMPDASIVSMVVDLL 376
               ++P A   S +++ L
Sbjct: 369 LADGLVPTAVTYSALINQL 387



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 107/218 (49%), Gaps = 2/218 (0%)

Query: 161 ILINGYCKNK-EVEEALSLYREM-VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           IL+   C+N+ EV+  + +  E+  +     T+ +++TL + L +         ++ EM 
Sbjct: 135 ILMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEML 194

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  +  T+N  I  LC  G + EA  +   +       D   Y  LI G CK+G L+
Sbjct: 195 NSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLD 254

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           +A E+F  + +     + VTY+ +I+GLC++G++++A D+  +M +  + P V  +   I
Sbjct: 255 LAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPI 314

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                  +  + ++LL KMK++   P+    + ++  L
Sbjct: 315 VSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGL 352



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 69/141 (48%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN  TY T++ GLC +G   +A  L   MK + + P    Y +L+ G C   +   A 
Sbjct: 649 CEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESAL 708

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++F  M+  G QP +  +  ++  LCK     +A  +   M+++    +   ++ L+DG 
Sbjct: 709 KIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGL 768

Query: 132 CLTGKINRAEELFGSMESMGC 152
              G+ + + EL   MES  C
Sbjct: 769 LKEGETDLSLELLHVMESRNC 789



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 52/108 (48%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+   Y  ++ G CK   V+ A  +F  M      P +  Y +LI  LC AN   +A+ 
Sbjct: 685 QPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQC 744

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           +F  M+ +      V + V++D L K G+ D +  LL +M  R+   N
Sbjct: 745 MFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLN 792


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 182/364 (50%), Gaps = 1/364 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P T T N ++ G C+ G + KA  LFL M       +  +Y  LI GLC A    +A  
Sbjct: 215 EPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALV 274

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M   G  P+V  F  ++  LCK+G++ +A  L D M Q  V P+  TY+ ++ G+ 
Sbjct: 275 LFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYS 334

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++N A ++   ME  GC  DD +YN LI G C  K  EEA  L    V +G  PTVV
Sbjct: 335 KLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVV 393

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+  L  G     + + AL++  +M       D   +   I+ L K   + EA EL   +
Sbjct: 394 TFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI 453

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++  Y  +IDG CKSG+++IALE+ + + R     +  TYN +++GL  D ++
Sbjct: 454 SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKL 513

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            KA  L   M+++ + PNVI + TL+ G    +       L   M++  + PD    +++
Sbjct: 514 HKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVL 573

Query: 373 VDLL 376
            D L
Sbjct: 574 TDAL 577



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 185/363 (50%), Gaps = 4/363 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TYNT+I GLC +   ++A+ L      E   P VVT+ +LI+G C A  +++A 
Sbjct: 354 CHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDAL 412

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R+  +MM    +  +  F  +++ L K  ++ EA  LL+ +    + PN  TY++++DG+
Sbjct: 413 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGY 472

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +GK++ A E+   ME  GC+ +  +YN L+ G  K+K++ +A++L  +M   GI P V
Sbjct: 473 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 532

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TY TL  G  + H  ++A +LFE M+++ +  D   Y    D LCK G   EA      
Sbjct: 533 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR 592

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
            G+    L    Y  LIDG  K+G  + A  L   +       D  TY++++H LC   +
Sbjct: 593 KGV---ALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 649

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A  +   M    +   +  +  LI   +R  K      + ++M      P A+  ++
Sbjct: 650 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTV 709

Query: 372 VVD 374
            ++
Sbjct: 710 FIN 712



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 189/379 (49%), Gaps = 21/379 (5%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN  TYN+++ GL K+  + KA AL  +M+ + I P+V+TY +L+ G C  +D++ A 
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552

Query: 72  RLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           RLF EMM+Q G++P    + V+ D LCK G+ +EA      +V++ V      Y+TL+DG
Sbjct: 553 RLF-EMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDG 608

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           F   G  + A  L   M   GC  D  +Y++L++  CK K + EAL +  +M  +GIK T
Sbjct: 609 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           +  Y  L   +    + +HA +++ EM         +TY  FI+  CK G + +A +L  
Sbjct: 669 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 728

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH------ 304
            +       D+  YN LIDG    G ++ A    + +       +  TY +++       
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 788

Query: 305 ----------GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
                     G+ N  ++D    L   M ++ + P V  + +LI GF +  +  +   LL
Sbjct: 789 LAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLL 848

Query: 355 HKMKEKKVMPDASIVSMVV 373
             M  K + P+  I ++++
Sbjct: 849 DHMCGKGLSPNEDIYTLLI 867



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 195/397 (49%), Gaps = 33/397 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N  +Y  +I GLC    V KA  LFL MK +  +P+V  +  LI GLC +    +A+
Sbjct: 249 CQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 308

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M   GV PSV+T+N ++    K G+M++A ++ +LM +    P+ +TY+TL+ G 
Sbjct: 309 LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 368

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K   AEEL  +    G     V++  LINGYC  ++ ++AL +  +M+S   K  +
Sbjct: 369 C-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDL 427

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             +  L   L +  +++ A +L  E+  + +  +  TY + IDG CK+G +  A+E+ + 
Sbjct: 428 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 487

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ +   YN L+ GL K  +L  A+ L   + +  ++ +V+TY  ++ G C++  
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 547

Query: 312 MDKAHDLFLDMEENAVAPN--------------------------------VIIFVTLIH 339
            D A  LF  ME+N + P+                                 + + TLI 
Sbjct: 548 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLID 607

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           GF +         L+ +M ++   PD+   S+++  L
Sbjct: 608 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHAL 644



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 189/381 (49%), Gaps = 34/381 (8%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           YN  +  L +    +    ++ Q+  + + PD VTYN++I   C   D   A R F  ++
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 210

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           + G++P   T N ++   C+ G++ +A  L  +M     + N ++Y+ L+ G C    + 
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 270

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
           +A  LF  M+  GC  +  ++  LI+G CK+  V +A  L+  M   G+ P+V+TYN + 
Sbjct: 271 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK-------------------- 238
           +G  ++ ++  ALK+ E M+++    D  TYNT I GLC                     
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTP 390

Query: 239 ---------NGYIV-----EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
                    NGY +     +A+ +   +   KC+LD+Q +  LI+ L K  RL+ A EL 
Sbjct: 391 TVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELL 450

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
             +    LV +V+TY  +I G C  G++D A ++   ME +   PN   + +L++G V+ 
Sbjct: 451 NEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKD 510

Query: 345 NKPSKVIELLHKMKEKKVMPD 365
            K  K + LL KM++  ++P+
Sbjct: 511 KKLHKAMALLTKMQKDGIIPN 531



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 170/354 (48%), Gaps = 3/354 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CK +   +  +I+ L K+  + +AK L  ++    + P+V+TY S+I G C +   + A 
Sbjct: 423 CKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIAL 482

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   M   G QP+  T+N +M  L K+ K+ +A  LL  M +  + PN  TY+TL+ G 
Sbjct: 483 EVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQ 542

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C     + A  LF  ME  G K D+ +Y +L +  CK    EEA S    +V KG+  T 
Sbjct: 543 CDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTK 599

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V Y TL  G  +    + A  L E M  +    D+ TY+  +  LCK   + EA+ +   
Sbjct: 600 VYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQ 659

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +   +  I AY  LID + + G+ + A  ++  +          TY + I+  C +G+
Sbjct: 660 MSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGR 719

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++ A DL L ME   VAP+V+ +  LI G   +    +    L +M      P+
Sbjct: 720 LEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 773



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 172/374 (45%), Gaps = 16/374 (4%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V Y T+IDG  K G  D A  L  +M  E   PD  TY+ L+H LC     NEA  +  +
Sbjct: 600 VYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQ 659

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M  +G++ ++  + +++DE+ + GK D A R+ + M     +P+A TY+  ++ +C  G+
Sbjct: 660 MSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGR 719

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           +  AE+L   ME  G   D V+YNILI+G      ++ A S  + MV    +P   TY  
Sbjct: 720 LEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCL 779

Query: 197 LF----------------LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           L                  G++ + +++   +L E M +  +    +TY++ I G CK G
Sbjct: 780 LLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAG 839

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            + EA  L   +       +   Y  LI   C +   E AL     +        + +Y 
Sbjct: 840 RLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYR 899

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +++ GLCN+G  +K   LF D+ E     + + +  L  G ++        ++L  M+++
Sbjct: 900 LLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 959

Query: 361 KVMPDASIVSMVVD 374
                +   ++V +
Sbjct: 960 YCCISSQTYALVTN 973



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 145/330 (43%), Gaps = 16/330 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P++ TY+ ++  LCK+  +++A  +  QM    I   +  Y  LI  +      + AK
Sbjct: 630 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 689

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R++ EM   G +PS  T+ V ++  CK G++++A  L+  M +  V P+  TY+ L+DG 
Sbjct: 690 RMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGC 749

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK----------------EVEEA 175
              G I+RA      M    C+ +  +Y +L+    K                  E++  
Sbjct: 750 GHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDIT 809

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
             L   MV  G+ PTV TY++L  G  +  ++E A  L + M    ++ +   Y   I  
Sbjct: 810 WQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKC 869

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
            C   +  +A+     +     +  +++Y  L+ GLC  G  E    LF  L       D
Sbjct: 870 CCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHD 929

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
            V + I+  GL   G +D    +   ME+ 
Sbjct: 930 EVAWKILNDGLLKAGYVDICFQMLSIMEKR 959



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 120/268 (44%), Gaps = 16/268 (5%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY   I+  CKEG ++ A+ L L+M+ E + PDVVTYN LI G  H    + A  
Sbjct: 701 KPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFS 760

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNG----------------KMDEASRLLDLMVQRD 116
               M+    +P+  T+ +++  L K                  ++D   +LL+ MV+  
Sbjct: 761 TLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHG 820

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           + P   TYS+L+ GFC  G++  A  L   M   G   ++  Y +LI   C  K  E+AL
Sbjct: 821 LNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKAL 880

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           S    M   G +P + +Y  L +GL      E    LF ++       D   +    DGL
Sbjct: 881 SFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGL 940

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAY 264
            K GY+    ++   +    C +  Q Y
Sbjct: 941 LKAGYVDICFQMLSIMEKRYCCISSQTY 968



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 90/194 (46%), Gaps = 4/194 (2%)

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           +A+   R   S  +  +   YN     L      E+  +++ ++ +D +  DT TYNT I
Sbjct: 131 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 190

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNC--LIDGLCKSGRLEIALELFRSLPRRV 291
              CK G +  A   FR L  L+  L+ + + C  L+ G C++G L  A  LF  +P   
Sbjct: 191 KSYCKEGDLTTAHRYFRLL--LEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 248

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
              +  +Y I+I GLC+   + KA  LFL M+ +  +PNV  F  LI G  +  +     
Sbjct: 249 CQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 308

Query: 352 ELLHKMKEKKVMPD 365
            L   M +  V+P 
Sbjct: 309 LLFDAMPQNGVVPS 322



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 3/163 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TY+++I G CK G +++A  L   M G+ ++P+   Y  LI   C    + +A   
Sbjct: 823 PTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSF 882

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M + G QP + ++ +++  LC  G  ++   L   +++     +   +  L DG   
Sbjct: 883 VSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLK 942

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
            G ++   ++   ME   C     +Y ++ N   K  EV  +L
Sbjct: 943 AGYVDICFQMLSIMEKRYCCISSQTYALVTN---KMHEVSSSL 982


>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
          Length = 847

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 187/347 (53%)

Query: 28  KEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVV 87
           K+  V++  ++F +M    ++PDV   N ++  L   +  ++A  ++  M + G++P++V
Sbjct: 482 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 541

Query: 88  TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
           T+N ++D  CK GK+ +   LL  M +R   PN  TY+ L++G    G+  +A+ L G M
Sbjct: 542 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 601

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
              G K    +YN LI GY     + EALSL  EMV KG  PTV TYN+   GL ++ ++
Sbjct: 602 LKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 661

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
             A++   +M  +++  D  +YNT I G C+ G +++A  LF  L  +     I  YN L
Sbjct: 662 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 721

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           +DGLC+ G LE+A +L   +    +  D+VTY I+++G C  G +  A + F +M    +
Sbjct: 722 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 781

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +   + T I G +++   S+   L  +M  K   PD  I ++VVD
Sbjct: 782 ELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVD 828



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/314 (34%), Positives = 164/314 (52%), Gaps = 2/314 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE G+  KP  VTYNT++D  CK G V +   L  +M+     P+ VTYN LI+GL    
Sbjct: 532 GEFGI--KPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKG 589

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
           ++ +AK L  EM+  G++ S  T+N ++      G + EA  L + MV +   P   TY+
Sbjct: 590 EFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYN 649

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           + + G C  G+++ A +    M +     D VSYN LI GYC+   + +A  L+ E+ S 
Sbjct: 650 SFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSI 709

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            + PT+VTYNTL  GL    ++E A +L  EM  + +A D  TY   ++G CK G +  A
Sbjct: 710 YLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMA 769

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            E F  +     ELD  AY   I G  K G    A  L   +  +    D++ YN+++ G
Sbjct: 770 QEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDG 829

Query: 306 LCNDGQMDKAHDLF 319
           LC  G +++A +L 
Sbjct: 830 LCKLGNLEEASELL 843



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 132/277 (47%), Gaps = 35/277 (12%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM---------------------KG------ 44
           C PN VTYN +I+GL K+G  ++AK L  +M                     KG      
Sbjct: 571 CAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEAL 630

Query: 45  --------ENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
                   +  +P V TYNS I+GLC     ++A +   +M+   + P VV++N ++   
Sbjct: 631 SLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGY 690

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           C+ G + +A  L D +    + P   TY+TL+DG C  G++  A++L   M + G   D 
Sbjct: 691 CRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDI 750

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           V+Y IL+NG CK   +  A   + EM+ +G++     Y T  +G  ++     A  L EE
Sbjct: 751 VTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEE 810

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           M       D   YN  +DGLCK G + EA EL +  G
Sbjct: 811 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKDG 847



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 3/218 (1%)

Query: 151 GCKHDDVSYNIL---INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
           GC   +VS  IL   I  Y K   VE+ LS++ +M+   + P V   N +   L +   +
Sbjct: 462 GCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLM 521

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
             A++++  M    +     TYNT +D  CK G + + ++L   +    C  +   YN L
Sbjct: 522 SKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVL 581

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           I+GL K G  E A  L   + +  L     TYN +I+G  N G + +A  L  +M     
Sbjct: 582 INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGA 641

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +P V  + + I+G  ++ + S  ++ L  M    ++PD
Sbjct: 642 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPD 679


>gi|147790305|emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
          Length = 722

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 181/352 (51%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  +Y  ++ G  KEG  ++A  +  +MK +   P+V+TY  ++  LC      +A  + 
Sbjct: 257 NAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDIL 316

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M  +G  P +VT+NVI+ EL    +  E   LL ++ Q+++ P++FTY+ L  G    
Sbjct: 317 GKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALTGGLLKR 376

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G++  A +L   + S GC  D   YNI  +  C+  +  EALSL + MV KG+ PT V+Y
Sbjct: 377 GQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPTNVSY 436

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           NT+  G    + ++ AL+LF+  +  + + D  ++NT +   CK G       +   +  
Sbjct: 437 NTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEY 496

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              +L++ +  CLI   C  G++   LEL  S+ R  L   VVT+N+++  LC +G +  
Sbjct: 497 EGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGT 556

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           AH +F +       PN   +  LIH  +R    S V +LL  M   ++ PDA
Sbjct: 557 AHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDA 608



 Score =  157 bits (396), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 161/355 (45%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYN I+  L  +    +   L   +  + I+PD  TY +L  GL        A 
Sbjct: 324 CDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALTGGLLKRGQVRVAN 383

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   ++  G    V  +N+    LC+  K  EA  LL  MV++ + P   +Y+T+++GF
Sbjct: 384 KLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPTNVSYNTILNGF 443

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    I+ A +LF   E      D VS+N +++  CK         +   M  +G+K  V
Sbjct: 444 CRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNV 503

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+   L      I ++   L+L E M R+ +     T+N  +D LCKNG +  A  +FR 
Sbjct: 504 VSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFRE 563

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                   +  +YN LI    + G   +  +L R +    L  D VTY   I GLC +G+
Sbjct: 564 FRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEGK 623

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +  A  L   M E+ + P V I+ T++    +  K   ++ LL  M      P+A
Sbjct: 624 ISVAIQLRDQMLESGLTPTVTIYNTILAAMFQRGKFWDIVSLLKDMTMDGCEPNA 678



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 147/320 (45%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P++ TY  +  GL K G V  A  L L +       DV  YN   H LC  N   EA  
Sbjct: 360 SPDSFTYAALTGGLLKRGQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALS 419

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+++G+ P+ V++N I++  C+   +DEA +L D     +  P+  +++T++   C
Sbjct: 420 LLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAAC 479

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  +    +   ME  G K + VS   LI  +C   ++ E L L   M+  G+ PTVV
Sbjct: 480 KQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVV 539

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N L   L +   +  A ++F E +      +T++YN  I    + G      +L R +
Sbjct: 540 TFNMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDM 599

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + + D   Y   I GLCK G++ +A++L   +    L   V  YN ++  +   G+ 
Sbjct: 600 YSWRLKPDAVTYGSFIKGLCKEGKISVAIQLRDQMLESGLTPTVTIYNTILAAMFQRGKF 659

Query: 313 DKAHDLFLDMEENAVAPNVI 332
                L  DM  +   PN +
Sbjct: 660 WDIVSLLKDMTMDGCEPNAV 679



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 159/366 (43%), Gaps = 6/366 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   T N +I  L K G   +A  +F  + G+       +YN ++  LC       A  L
Sbjct: 186 PTEPTLNLLISMLSKAGMAREAHFVFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALAL 245

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            + +   G   +  ++  ++    K G  +EA  +LD M     +PN  TY+ ++   C 
Sbjct: 246 LYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCD 305

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+I  A ++ G M   GC  D V+YN+++          E   L + +  K I P   T
Sbjct: 306 EGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFT 365

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           Y  L  GL +  QV  A KL   +       D + YN +   LC+     EA+ L +++ 
Sbjct: 366 YAALTGGLLKRGQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMV 425

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             G++   +   +YN +++G C+   ++ AL+LF          DVV++N ++   C  G
Sbjct: 426 EKGLVPTNV---SYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQG 482

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
                  +   ME   V  NV+    LI  F  I K S+ +ELL  M    + P     +
Sbjct: 483 NSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFN 542

Query: 371 MVVDLL 376
           M++D L
Sbjct: 543 MLLDKL 548



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 131/252 (51%), Gaps = 2/252 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E G+V  P  V+YNTI++G C+E  +D+A  LF   +  N +PDVV++N+++   C   +
Sbjct: 426 EKGLV--PTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGN 483

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            +  +R+ + M  +GV+ +VV+   ++   C  GK+ E   LL+ M++  + P   T++ 
Sbjct: 484 SSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNM 543

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+D  C  G +  A  +F    + G   +  SYNILI+   +         L R+M S  
Sbjct: 544 LLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWR 603

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +KP  VTY +   GL +  ++  A++L ++M    +    + YNT +  + + G   + V
Sbjct: 604 LKPDAVTYGSFIKGLCKEGKISVAIQLRDQMLESGLTPTVTIYNTILAAMFQRGKFWDIV 663

Query: 247 ELFRTLGILKCE 258
            L + + +  CE
Sbjct: 664 SLLKDMTMDGCE 675



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 153/352 (43%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T+N ++DG+   G +  A     +M      P   +   ++          ++  +
Sbjct: 116 PNASTFNILLDGMTSTGNLRAAFFFAEEMWRSGFLPSFTSLLKILKKWLGLGSLVDSMSV 175

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+     P+  T N+++  L K G   EA  +  +++ +     A +Y+ ++   C 
Sbjct: 176 FEFMLRLEYFPTEPTLNLLISMLSKAGMAREAHFVFRVLLGKGCLKCAHSYNPILWALCK 235

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A  L  S++ MG  H+  SY  L+ G+ K    EEA  +  EM   G KP V+T
Sbjct: 236 CGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVIT 295

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  +   L +  ++  AL +  +M ++    D  TYN  +  L      VE  EL + + 
Sbjct: 296 YTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVID 355

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +   D   Y  L  GL K G++ +A +L   +       DV  YNI  H LC + +  
Sbjct: 356 QKEISPDSFTYAALTGGLLKRGQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSG 415

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A  L   M E  + P  + + T+++GF R N   + ++L    +     PD
Sbjct: 416 EALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPD 467



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 126/280 (45%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           I   C  +   YN     LC+E    +A +L   M  + + P  V+YN++++G C  N  
Sbjct: 390 ISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCRENHI 449

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +EA +LF         P VV+FN I+   CK G      R+L  M    V+ N  + + L
Sbjct: 450 DEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCL 509

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +  FC  GKI+   EL  SM   G     V++N+L++  CKN  +  A  ++RE  + G 
Sbjct: 510 IQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTGY 569

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P   +YN L              +L  +M    +  D  TY +FI GLCK G I  A++
Sbjct: 570 FPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEGKISVAIQ 629

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           L   +        +  YN ++  + + G+    + L + +
Sbjct: 630 LRDQMLESGLTPTVTIYNTILAAMFQRGKFWDIVSLLKDM 669



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/356 (23%), Positives = 147/356 (41%), Gaps = 5/356 (1%)

Query: 14  PNTVTYNTIIDGLCKEG-----FVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           P+   YN ++    K        +D+   ++  MK     P+  T+N L+ G+    +  
Sbjct: 76  PSVNDYNALLYHYLKSSSRHLIVLDELVQVYFGMKRLGPYPNASTFNILLDGMTSTGNLR 135

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A     EM   G  PS  +   I+ +    G + ++  + + M++ +  P   T + L+
Sbjct: 136 AAFFFAEEMWRSGFLPSFTSLLKILKKWLGLGSLVDSMSVFEFMLRLEYFPTEPTLNLLI 195

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
                 G    A  +F  +   GC     SYN ++   CK  +   AL+L   +   G  
Sbjct: 196 SMLSKAGMAREAHFVFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLKKMGAV 255

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
               +Y  L  G  +    E A  + +EM+ D    +  TY   +  LC  G I +A+++
Sbjct: 256 HNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDI 315

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +G   C+ DI  YN ++  L    R     EL + + ++ +  D  TY  +  GL  
Sbjct: 316 LGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALTGGLLK 375

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            GQ+  A+ L L +       +V ++    H   R NK  + + LL  M EK ++P
Sbjct: 376 RGQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVP 431



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 103/227 (45%), Gaps = 6/227 (2%)

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
           +++  M+ +G   +  ++NIL++G      +  A     EM   G  P+  +   +    
Sbjct: 104 QVYFGMKRLGPYPNASTFNILLDGMTSTGNLRAAFFFAEEMWRSGFLPSFTSLLKILKKW 163

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCE 258
             +  +  ++ +FE M R +      T N  I  L K G   EA  +FR L   G LKC 
Sbjct: 164 LGLGSLVDSMSVFEFMLRLEYFPTEPTLNLLISMLSKAGMAREAHFVFRVLLGKGCLKCA 223

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
               +YN ++  LCK G+   AL L  SL +   V +  +Y  +++G   +G  ++A  +
Sbjct: 224 ---HSYNPILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCM 280

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             +M+ +   PNVI +  ++       +    +++L KM ++   PD
Sbjct: 281 LDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPD 327



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/323 (20%), Positives = 137/323 (42%), Gaps = 40/323 (12%)

Query: 49  PDVVTYNSLIHGLCHAND-----WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMD 103
           P V  YN+L++    ++       +E  +++F M   G  P+  TFN+++D +   G + 
Sbjct: 76  PSVNDYNALLYHYLKSSSRHLIVLDELVQVYFGMKRLGPYPNASTFNILLDGMTSTGNLR 135

Query: 104 EASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILI 163
            A    + M +    P+  +   ++  +   G +  +  +F  M  +     + + N+LI
Sbjct: 136 AAFFFAEEMWRSGFLPSFTSLLKILKKWLGLGSLVDSMSVFEFMLRLEYFPTEPTLNLLI 195

Query: 164 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVA 223
           +   K     EA  ++R ++ KG      +YN +   L +  Q   AL L   +++    
Sbjct: 196 SMLSKAGMAREAHFVFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLKKMGAV 255

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL 283
            + ++Y   + G  K G   EA           C LD       IDG CK          
Sbjct: 256 HNAASYTALVYGFSKEGLWEEAF----------CMLDEMK----IDG-CK---------- 290

Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
                      +V+TY +++  LC++G++  A D+   M +    P+++ +  ++     
Sbjct: 291 ----------PNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFH 340

Query: 344 INKPSKVIELLHKMKEKKVMPDA 366
            ++  ++ ELL  + +K++ PD+
Sbjct: 341 QDRYVEIGELLQVIDQKEISPDS 363



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 2/103 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY + I GLCKEG +  A  L  QM    + P V  YN+++  +     + +   
Sbjct: 605 KPDAVTYGSFIKGLCKEGKISVAIQLRDQMLESGLTPTVTIYNTILAAMFQRGKFWDIVS 664

Query: 73  LFFEMMDQGVQPSVVTFNVIMDEL--CKNGKMDEASRLLDLMV 113
           L  +M   G +P+ V+  ++   +  C   +  E S+ L+ ++
Sbjct: 665 LLKDMTMDGCEPNAVSIEILKQAMSKCWMKRFPEVSKQLEFVI 707


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 179/353 (50%), Gaps = 1/353 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T   + ++ GL  +     A  LF +M    + PDV TYN+LIH  C A+   EA  L
Sbjct: 365 PSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNL 423

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   GV+PS+ T+N ++   CK G MDEA +L   M     +PN  TY TLM G+  
Sbjct: 424 FDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIA 483

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
               + A  L   M+  G   +D +YN+LING C    V E   + +  +S+G  PT++T
Sbjct: 484 KKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMT 543

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN++  G  +   +  A  ++++M+   +  +  TY +FIDG C+ G    A+++   + 
Sbjct: 544 YNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVR 603

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + DI AYN LI+G C+ G +  AL+L   L +  L  + V YN +I G  N   M 
Sbjct: 604 RRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMK 663

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +    +  M +  +  +   + TLI GF +    +  +EL  +M  K  +PDA
Sbjct: 664 EVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDA 716



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 184/361 (50%), Gaps = 1/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  V Y  +I G  + G   KA  L  QM G+ + P     + ++ GL +   W +A  L
Sbjct: 330 PTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCL 389

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM D G+ P V T+N ++   C+  K+ EA  L D M +  V+P+  TY++L+ G+C 
Sbjct: 390 FEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCK 448

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A +L+  M   G K + V+Y  L+ GY   K+ + A +L  EM   G+     T
Sbjct: 449 KGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYT 508

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G+  + +V     + +    +       TYN+ I+G  K G +  A  +++ + 
Sbjct: 509 YNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMR 568

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +I  Y   IDG C++G  ++AL++   + RR L  D+V YN +I+G C +G M 
Sbjct: 569 EKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMS 628

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L + + ++ +APN +++ +LI G+  +N   +V +    M +  ++ D S  + ++
Sbjct: 629 HALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLI 688

Query: 374 D 374
           D
Sbjct: 689 D 689



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 172/326 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTY T++ G   +   D A AL  +MK   ++ +  TYN LI+G+C  +   E   
Sbjct: 468 KPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDG 527

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +    M +G  P+++T+N I++   K G M  A  +   M ++ + PN  TY++ +DG+C
Sbjct: 528 MLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYC 587

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            TG  + A ++   +   G + D V+YN LING+C+   +  AL L   ++  G+ P  V
Sbjct: 588 RTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTV 647

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN+L  G   ++ ++   K +E M +  + ADTSTY T IDG  K+G +  A+EL+  +
Sbjct: 648 VYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEM 707

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D   +  L  GLC+SG ++ A +L   + R  +  +V  YN++I+G   D ++
Sbjct: 708 MAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKL 767

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLI 338
            +A  L  +M    + P+   +  L+
Sbjct: 768 QEAFRLHDEMLNMGIQPDDTTYDILV 793



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 164/346 (47%), Gaps = 1/346 (0%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           ++ ++    KEG  + A  LF +M G  I+PD   Y   I  LC   D   A R+  EM 
Sbjct: 195 FDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMK 254

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           + G      T+  ++D L K G+M+EA R+ D M     + +    +TLM G+CL  ++ 
Sbjct: 255 EVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVG 314

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A  LF      G     V Y +LI G  +    ++A  L R+M  +G+ P+    + + 
Sbjct: 315 NALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVL 374

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            GL    + + A+ LFEEM  D    D  TYN  I   C+   + EA+ LF  +     +
Sbjct: 375 KGLLNDRRWKDAVCLFEEMA-DSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVK 433

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
             I  YN L+ G CK G ++ A++L+  +P      +VVTY  ++ G       D A+ L
Sbjct: 434 PSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYAL 493

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
             +M++N V+ N   +  LI+G   +++  +V  +L     +  +P
Sbjct: 494 LDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIP 539



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 154/328 (46%), Gaps = 1/328 (0%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
           A ALF++M+G     D   +++L+          +A RLF EM    + P    + + + 
Sbjct: 176 ALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAIT 235

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            LCK G    A R+L  M +       FTY T++D    TG++  A  +   M   G K 
Sbjct: 236 ALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKM 295

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D +    L+ GYC  +EV  AL+L++E +  GI PT V Y  L  G  ++   + A +L 
Sbjct: 296 DVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELC 355

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
            +M    +   T   +  + GL  +    +AV LF  +       D+  YN LI   C++
Sbjct: 356 RQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLP-DVFTYNNLIHWHCQA 414

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            +L  AL LF  + +  +   + TYN ++ G C  G MD+A  L+ +M      PNV+ +
Sbjct: 415 HKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTY 474

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKV 362
           +TL+ G++          LL +MK+  V
Sbjct: 475 ITLMRGYIAKKDFDNAYALLDEMKQNGV 502



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 80/151 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNTV YN++I G      + +    +  M    I  D  TY +LI G     +   A  L
Sbjct: 644 PNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALEL 703

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + EMM +G  P   TF  +   LC++G +D A +LL+ M + DVRPN F Y+ L++G+  
Sbjct: 704 YSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLR 763

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILIN 164
             K+  A  L   M +MG + DD +Y+IL++
Sbjct: 764 DCKLQEAFRLHDEMLNMGIQPDDTTYDILVS 794



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 7/300 (2%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           + A   +  M+ +GV P + +   ++    +     +A  L   M  R  R +A+ +  L
Sbjct: 139 SAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDAL 198

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           M      G    A  LF  M       D   Y + I   CK  +   AL + REM   G 
Sbjct: 199 MSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGF 258

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
                TY T+   L +  ++E AL++ +EM+      D     T + G C    +  A+ 
Sbjct: 259 DTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALN 318

Query: 248 LFR-TL--GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           LF+ TL  GI+  ++    Y  LI G  + G  + A EL R +  + L+      ++++ 
Sbjct: 319 LFKETLKDGIVPTKV---MYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLK 375

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           GL ND +   A  LF +M ++ + P+V  +  LIH   + +K  + + L  +MK+  V P
Sbjct: 376 GLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKP 434



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 48/82 (58%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+  +  GLC+ G +D AK L  +M+  ++ P+V  YN LI+G        EA RL
Sbjct: 714 PDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRL 773

Query: 74  FFEMMDQGVQPSVVTFNVIMDE 95
             EM++ G+QP   T+++++ +
Sbjct: 774 HDEMLNMGIQPDDTTYDILVSK 795


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 184/351 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + VT + ++ GLC++G   +A ALF +M      P+ VTY +LI  L  A    E   L 
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ +GV   +VT+  +MD L K GK DE    L   +  ++ PN  TY+ L+D  C  
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKA 392

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
             ++ AE++   ME      + V+++ +ING+ K   +++A    R M  +GI P VVTY
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            TL  G F+    + AL+++ +M  + V  +    ++ ++GL +NG I EA+ LF+    
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
               LD   Y  LIDGL K+G +  A +  + L  R ++ D V YN+ I+ LC  G+  +
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKE 572

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           A     +M    + P+   + T+I    R  + +K ++LLH+MK   + P+
Sbjct: 573 AKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 185/360 (51%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTY  ++D L K+G  D+ K        +N++P+ VTY  LI  LC A++ +EA+++  E
Sbjct: 345 VTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLE 404

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M ++ + P+VVTF+ +++   K G +D+A+    +M +R + PN  TY TL+DGF     
Sbjct: 405 MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQG 464

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
            + A E++  M   G K +    + L+NG  +N ++EEA++L+++    G+    V Y T
Sbjct: 465 QDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTT 524

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  GLF+   +  A K  +E+   ++  D   YN FI+ LC  G   EA      +  + 
Sbjct: 525 LIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMG 584

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            + D   YN +I   C+ G    AL+L   +    +  +++TYN ++ GL   G ++KA 
Sbjct: 585 LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAK 644

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            L  +M     +P+ +    ++    +  +   ++++   M    +  D ++ + ++ +L
Sbjct: 645 YLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVL 704



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 178/357 (49%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           V   PN VTY T+ID L K G   +  +L  +M    +  D+VTY +L+  L      +E
Sbjct: 303 VGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDE 362

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
            K      +   + P+ VT+ V++D LCK   +DEA ++L  M ++ + PN  T+S++++
Sbjct: 363 VKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVIN 422

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GF   G +++A E    M+  G   + V+Y  LI+G+ K +  + AL +Y +M+ +G+K 
Sbjct: 423 GFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKV 482

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
                ++L  GL +  ++E A+ LF++     ++ D   Y T IDGL K G +  A +  
Sbjct: 483 NKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFG 542

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + L       D   YN  I+ LC  G+ + A      +    L  D  TYN MI   C  
Sbjct: 543 QELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRK 602

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           G+  KA  L  +M+ +++ PN+I + TL+ G        K   LL++M      P +
Sbjct: 603 GETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSS 659



 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 178/391 (45%), Gaps = 35/391 (8%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V Y T+IDGL K G +  A     ++   N+ PD V YN  I+ LC    + EAK    E
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTE 579

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M + G++P   T+N ++   C+ G+  +A +LL  M    ++PN  TY+TL+ G   TG 
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639

Query: 137 INRAEELFGSMESMG--------------CK--------------------HDDVS-YNI 161
           + +A+ L   M S G              C                     H D++ YN 
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L+   C +    +A  +  EM+  GI P  +T+N L LG  +   +++A   + +M   +
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           ++ + +T+NT + GL   G I EA  +   +     E +   Y+ L  G  K      A+
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAM 819

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            L+  +  +  V  V TYN +I      G M +A +LF DM++  V P    +  L+ G+
Sbjct: 820 RLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            RI   ++V + L  MKEK   P    +S +
Sbjct: 880 SRIRNGTEVKKCLKDMKEKGFSPSKGTLSFI 910



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 181/362 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N    +++++GL + G +++A ALF    G  ++ D V Y +LI GL  A D   A +
Sbjct: 481 KVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFK 540

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              E+MD+ + P  V +NV ++ LC  GK  EA   L  M    ++P+  TY+T++   C
Sbjct: 541 FGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHC 600

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+  +A +L   M+    K + ++YN L+ G      VE+A  L  EMVS G  P+ +
Sbjct: 601 RKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSL 660

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+  +     +  +++  L + E M    + AD + YNT +  LC +G   +A  +   +
Sbjct: 661 THRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM 720

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D   +N LI G CKS  L+ A   +  +  + +  ++ T+N ++ GL + G++
Sbjct: 721 LGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRI 780

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  + ++ME++ + PN + +  L  G  + +   + + L  +M  K  +P  S  + +
Sbjct: 781 GEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNAL 840

Query: 373 VD 374
           + 
Sbjct: 841 IS 842



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 184/423 (43%), Gaps = 70/423 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PN VTY  +ID LCK   VD+A+ + L+M+ ++I+P+VVT++S+I+G       ++A  
Sbjct: 376 SPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATE 435

Query: 73  LFFEMMDQGVQPSVVTFNVIMDE-----------------LC------------------ 97
               M ++G+ P+VVT+  ++D                  LC                  
Sbjct: 436 YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLR 495

Query: 98  KNGKMDEA-------------------SRLLDLMVQRDVRPNAF---------------- 122
           +NGK++EA                   + L+D + +    P AF                
Sbjct: 496 QNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAV 555

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
            Y+  ++  C+ GK   A+     M +MG K D  +YN +I  +C+  E  +AL L  EM
Sbjct: 556 VYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
               IKP ++TYNTL  GLF    VE A  L  EM     +  + T+   +    ++  +
Sbjct: 616 KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRL 675

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
              +++   +       DI  YN L+  LC  G    A  +   +    +  D +T+N +
Sbjct: 676 DVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I G C    +D A   +  M    ++PN+  F TL+ G   + +  +   +L +M++  +
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGL 795

Query: 363 MPD 365
            P+
Sbjct: 796 EPN 798



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 168/363 (46%), Gaps = 6/363 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P TV YN ++  L        A A+  +M    +  D VT N+L+ GLC   +      
Sbjct: 100 RPTTVAYNILLAALSDHA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCR--NGQVDAA 154

Query: 73  LFFEMMDQGVQPSVVTFNVI-MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                   G+ P + +   + + ++   G    A  + D M  + +  +   Y+TL+ GF
Sbjct: 155 AALADRAGGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGF 214

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A  +   M+  G   +  +Y   I  YC+ K VEEA  LY  MV  G+   V
Sbjct: 215 CRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDV 274

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT + L  GL    +   A  LF EM +   A +  TY T ID L K G   E + L   
Sbjct: 275 VTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGE 334

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +      +D+  Y  L+D L K G+ +   +  R      L  + VTY ++I  LC    
Sbjct: 335 MVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHN 394

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A  + L+MEE +++PNV+ F ++I+GFV+     K  E    MKE+ + P+      
Sbjct: 395 VDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT 454

Query: 372 VVD 374
           ++D
Sbjct: 455 LID 457



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 159/325 (48%), Gaps = 14/325 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TYNT+I   C++G   KA  L  +MK  +I P+++TYN+L+ GL       +AK 
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+  G  PS +T   ++    ++ ++D    + + M+   +  +   Y+TL+   C
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G   +A  +   M   G   D +++N LI G+CK+  ++ A + Y +M+ + I P + 
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIA 765

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL  GL  + ++  A  +  EM++  +  +  TY+    G  K    VEA+ L+   
Sbjct: 766 TFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY--- 822

Query: 253 GILKCEL-------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
               CE+        +  YN LI    K+G +  A ELF+ + +R +     TY+I++ G
Sbjct: 823 ----CEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPN 330
                   +      DM+E   +P+
Sbjct: 879 WSRIRNGTEVKKCLKDMKEKGFSPS 903



 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 108/234 (46%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           YNT++  LC  G   KA  +  +M G  I PD +T+N+LI G C ++  + A   + +M+
Sbjct: 697 YNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQML 756

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            Q + P++ TFN ++  L   G++ EA  +L  M +  + PN  TY  L  G        
Sbjct: 757 HQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKV 816

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A  L+  M   G      +YN LI+ + K   + +A  L+++M  +G+ PT  TY+ L 
Sbjct: 817 EAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            G   I       K  ++M+    +    T +       K G   +A  L + L
Sbjct: 877 SGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 107/212 (50%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G    P+T+T+N +I G CK   +D A A + QM  +NI+P++ T+N+L+ GL      
Sbjct: 721 LGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRI 780

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA  +  EM   G++P+ +T++++     K     EA RL   MV +   P   TY+ L
Sbjct: 781 GEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNAL 840

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +  F   G + +A+ELF  M+  G      +Y+IL++G+ + +   E     ++M  KG 
Sbjct: 841 ISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGF 900

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
            P+  T + +     +      A +L + + R
Sbjct: 901 SPSKGTLSFICRAFSKPGMTWQAQRLLKNLYR 932



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 140/315 (44%), Gaps = 19/315 (6%)

Query: 71  KRLFFEMMDQGVQPSVVTF--------NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
           +RL   +   G+  + + F        N ++   C+   +  A  LL     R  RP   
Sbjct: 50  RRLIPALATSGLAAAAIRFRPADPASLNALLYSHCRLRLLRPAIALL-----RSSRPTTV 104

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
            Y+ L+           A  +   M   G   D V+ N L+ G C+N +V+ A +L    
Sbjct: 105 AYNILLAALS---DHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL--AD 159

Query: 183 VSKGIKPTVVTYNTL-FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
            + GI P + +  TL  L +        AL + + M    +  D   YNT + G C+ G 
Sbjct: 160 RAGGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQ 219

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           +  A  +   +     + ++  Y   I   C++  +E A +L+  + R  ++ DVVT + 
Sbjct: 220 VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           ++ GLC DG+  +A+ LF +M++   APN + + TLI    +  +  +++ LL +M  + 
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339

Query: 362 VMPDASIVSMVVDLL 376
           V+ D    + ++D L
Sbjct: 340 VVMDLVTYTALMDWL 354


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 184/351 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + VT + ++ GLC++G   +A ALF +M      P+ VTY +LI  L  A    E   L 
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ +GV   +VT+  +MD L K GK DE    L   +  ++ PN  TY+ L+D  C  
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKA 392

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
             ++ AE++   ME      + V+++ +ING+ K   +++A    R M  +GI P VVTY
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            TL  G F+    + AL+++ +M  + V  +    ++ ++GL +NG I EA+ LF+    
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
               LD   Y  LIDGL K+G +  A +  + L  R ++ D V YN+ I+ LC  G+  +
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKE 572

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           A     +M    + P+   + T+I    R  + +K ++LLH+MK   + P+
Sbjct: 573 AKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 185/360 (51%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTY  ++D L K+G  D+ K        +N++P+ VTY  LI  LC A++ +EA+++  E
Sbjct: 345 VTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLE 404

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M ++ + P+VVTF+ +++   K G +D+A+    +M +R + PN  TY TL+DGF     
Sbjct: 405 MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQG 464

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
            + A E++  M   G K +    + L+NG  +N ++EEA++L+++    G+    V Y T
Sbjct: 465 QDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTT 524

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  GLF+   +  A K  +E+   ++  D   YN FI+ LC  G   EA      +  + 
Sbjct: 525 LIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMG 584

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            + D   YN +I   C+ G    AL+L   +    +  +++TYN ++ GL   G ++KA 
Sbjct: 585 LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAK 644

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            L  +M     +P+ +    ++    +  +   ++++   M    +  D ++ + ++ +L
Sbjct: 645 YLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVL 704



 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 178/357 (49%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           V   PN VTY T+ID L K G   +  +L  +M    +  D+VTY +L+  L      +E
Sbjct: 303 VGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDE 362

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
            K      +   + P+ VT+ V++D LCK   +DEA ++L  M ++ + PN  T+S++++
Sbjct: 363 VKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVIN 422

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GF   G +++A E    M+  G   + V+Y  LI+G+ K +  + AL +Y +M+ +G+K 
Sbjct: 423 GFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKV 482

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
                ++L  GL +  ++E A+ LF++     ++ D   Y T IDGL K G +  A +  
Sbjct: 483 NKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFG 542

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + L       D   YN  I+ LC  G+ + A      +    L  D  TYN MI   C  
Sbjct: 543 QELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRK 602

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           G+  KA  L  +M+ +++ PN+I + TL+ G        K   LL++M      P +
Sbjct: 603 GETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSS 659



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 172/365 (47%), Gaps = 10/365 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P TV YN ++  L        A A+  +M    +  D VT N+L+ GLC     + A  
Sbjct: 100 RPTTVAYNILLAALSDHA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 73  LFFEMMDQGV---QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           L     D+G       V+ +N ++   C+ G    A  + D M  + +  +   Y+TL+ 
Sbjct: 157 L----ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVA 212

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GFC  G+++ A  +   M+  G   +  +Y   I  YC+ K VEEA  LY  MV  G+  
Sbjct: 213 GFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLL 272

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VVT + L  GL    +   A  LF EM +   A +  TY T ID L K G   E + L 
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +      +D+  Y  L+D L K G+ +   +  R      L  + VTY ++I  LC  
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKA 392

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
             +D+A  + L+MEE +++PNV+ F ++I+GFV+     K  E    MKE+ + P+    
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 370 SMVVD 374
             ++D
Sbjct: 453 GTLID 457



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 178/391 (45%), Gaps = 35/391 (8%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V Y T+IDGL K G +  A     ++   N+ PD V YN  I+ LC    + EAK    E
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTE 579

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M + G++P   T+N ++   C+ G+  +A +LL  M    ++PN  TY+TL+ G   TG 
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639

Query: 137 INRAEELFGSMESMG--------------CK--------------------HDDVS-YNI 161
           + +A+ L   M S G              C                     H D++ YN 
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L+   C +    +A  +  EM+  GI P  +T+N L LG  +   +++A   + +M   +
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           ++ + +T+NT + GL   G I EA  +   +     E +   Y+ L  G  K      A+
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAM 819

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            L+  +  +  V  V TYN +I      G M +A +LF DM++  V P    +  L+ G+
Sbjct: 820 RLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            RI   ++V + L  MKEK   P    +S +
Sbjct: 880 SRIRNGTEVKKCLKDMKEKGFSPSKGTLSFI 910



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 181/362 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N    +++++GL + G +++A ALF    G  ++ D V Y +LI GL  A D   A +
Sbjct: 481 KVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFK 540

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              E+MD+ + P  V +NV ++ LC  GK  EA   L  M    ++P+  TY+T++   C
Sbjct: 541 FGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHC 600

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+  +A +L   M+    K + ++YN L+ G      VE+A  L  EMVS G  P+ +
Sbjct: 601 RKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSL 660

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+  +     +  +++  L + E M    + AD + YNT +  LC +G   +A  +   +
Sbjct: 661 THRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM 720

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D   +N LI G CKS  L+ A   +  +  + +  ++ T+N ++ GL + G++
Sbjct: 721 LGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRI 780

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  + ++ME++ + PN + +  L  G  + +   + + L  +M  K  +P  S  + +
Sbjct: 781 GEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNAL 840

Query: 373 VD 374
           + 
Sbjct: 841 IS 842



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 177/388 (45%), Gaps = 35/388 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PN VTY  +ID LCK   VD+A+ + L+M+ ++I+P+VVT++S+I+G       ++A  
Sbjct: 376 SPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATE 435

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
               M ++G+ P+VVT+  ++D   K    D A  +   M+   V+ N F   +L++G  
Sbjct: 436 YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLR 495

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GKI  A  LF      G   D V+Y  LI+G  K  ++  A    +E++ + + P  V
Sbjct: 496 QNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAV 555

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN     L  + + + A     EM+   +  D STYNT I   C+ G   +A++L   +
Sbjct: 556 VYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL-----------PRRVLV-------- 293
            +   + ++  YN L+ GL  +G +E A  L   +            RRVL         
Sbjct: 616 KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRL 675

Query: 294 ----------------ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
                           AD+  YN ++  LC  G   KA  +  +M  + +AP+ I F  L
Sbjct: 676 DVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPD 365
           I G  + +          +M  + + P+
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPN 763



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 159/325 (48%), Gaps = 14/325 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TYNT+I   C++G   KA  L  +MK  +I P+++TYN+L+ GL       +AK 
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+  G  PS +T   ++    ++ ++D    + + M+   +  +   Y+TL+   C
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G   +A  +   M   G   D +++N LI G+CK+  ++ A + Y +M+ + I P + 
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIA 765

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL  GL  + ++  A  +  EM++  +  +  TY+    G  K    VEA+ L+   
Sbjct: 766 TFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY--- 822

Query: 253 GILKCEL-------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
               CE+        +  YN LI    K+G +  A ELF+ + +R +     TY+I++ G
Sbjct: 823 ----CEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPN 330
                   +      DM+E   +P+
Sbjct: 879 WSRIRNGTEVKKCLKDMKEKGFSPS 903



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 108/234 (46%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           YNT++  LC  G   KA  +  +M G  I PD +T+N+LI G C ++  + A   + +M+
Sbjct: 697 YNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQML 756

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            Q + P++ TFN ++  L   G++ EA  +L  M +  + PN  TY  L  G        
Sbjct: 757 HQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKV 816

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A  L+  M   G      +YN LI+ + K   + +A  L+++M  +G+ PT  TY+ L 
Sbjct: 817 EAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            G   I       K  ++M+    +    T +       K G   +A  L + L
Sbjct: 877 SGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 107/212 (50%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G    P+T+T+N +I G CK   +D A A + QM  +NI+P++ T+N+L+ GL      
Sbjct: 721 LGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRI 780

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA  +  EM   G++P+ +T++++     K     EA RL   MV +   P   TY+ L
Sbjct: 781 GEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNAL 840

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +  F   G + +A+ELF  M+  G      +Y+IL++G+ + +   E     ++M  KG 
Sbjct: 841 ISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGF 900

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
            P+  T + +     +      A +L + + R
Sbjct: 901 SPSKGTLSFICRAFSKPGMTWQAQRLLKNLYR 932


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 184/351 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + VT + ++ GLC++G   +A ALF +M      P+ VTY +LI  L  A    E   L 
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ +GV   +VT+  +MD L K GK DE    L   +  ++ PN  TY+ L+D  C  
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKA 392

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
             ++ AE++   ME      + V+++ +ING+ K   +++A    R M  +GI P VVTY
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            TL  G F+    + AL+++ +M  + V  +    ++ ++GL +NG I EA+ LF+    
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
               LD   Y  LIDGL K+G +  A +  + L  R ++ D V YN+ I+ LC  G+  +
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKE 572

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           A     +M    + P+   + T+I    R  + +K ++LLH+MK   + P+
Sbjct: 573 AKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 185/360 (51%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTY  ++D L K+G  D+ K        +N++P+ VTY  LI  LC A++ +EA+++  E
Sbjct: 345 VTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLE 404

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M ++ + P+VVTF+ +++   K G +D+A+    +M +R + PN  TY TL+DGF     
Sbjct: 405 MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQG 464

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
            + A E++  M   G K +    + L+NG  +N ++EEA++L+++    G+    V Y T
Sbjct: 465 QDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTT 524

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  GLF+   +  A K  +E+   ++  D   YN FI+ LC  G   EA      +  + 
Sbjct: 525 LIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMG 584

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            + D   YN +I   C+ G    AL+L   +    +  +++TYN ++ GL   G ++KA 
Sbjct: 585 LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAK 644

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            L  +M     +P+ +    ++    +  +   ++++   M    +  D ++ + ++ +L
Sbjct: 645 YLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVL 704



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 178/357 (49%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           V   PN VTY T+ID L K G   +  +L  +M    +  D+VTY +L+  L      +E
Sbjct: 303 VGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDE 362

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
            K      +   + P+ VT+ V++D LCK   +DEA ++L  M ++ + PN  T+S++++
Sbjct: 363 VKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVIN 422

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GF   G +++A E    M+  G   + V+Y  LI+G+ K +  + AL +Y +M+ +G+K 
Sbjct: 423 GFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKV 482

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
                ++L  GL +  ++E A+ LF++     ++ D   Y T IDGL K G +  A +  
Sbjct: 483 NKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFG 542

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + L       D   YN  I+ LC  G+ + A      +    L  D  TYN MI   C  
Sbjct: 543 QELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRK 602

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           G+  KA  L  +M+ +++ PN+I + TL+ G        K   LL++M      P +
Sbjct: 603 GETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSS 659



 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 172/365 (47%), Gaps = 10/365 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P TV YN ++  L        A A+  +M    +  D VT N+L+ GLC     + A  
Sbjct: 100 RPTTVAYNILLAALSDHA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 73  LFFEMMDQGV---QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           L     D+G       V+ +N ++   C+ G    A  + D M  + +  +   Y+TL+ 
Sbjct: 157 L----ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVA 212

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GFC  G+++ A  +   M+  G   +  +Y   I  YC+ K VEEA  LY  MV  G+  
Sbjct: 213 GFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLL 272

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VVT + L  GL    +   A  LF EM +   A +  TY T ID L K G   E + L 
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +      +D+  Y  L+D L K G+ +   +  R      L  + VTY ++I  LC  
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKA 392

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
             +D+A  + L+MEE +++PNV+ F ++I+GFV+     K  E    MKE+ + P+    
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 370 SMVVD 374
             ++D
Sbjct: 453 GTLID 457



 Score =  160 bits (405), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 181/362 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N    +++++GL + G +++A ALF    G  ++ D V Y +LI GL  A D   A +
Sbjct: 481 KVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFK 540

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              E+MD+ + P  V +NV ++ LC  GK  EA   L  M    ++P+  TY+T++   C
Sbjct: 541 FGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHC 600

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+  +A +L   M+    K + ++YN L+ G      VE+A  L  EMVS G  P+ +
Sbjct: 601 RKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSL 660

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+  +     +  +++  L + E M    + AD + YNT +  LC +G   +A  +   +
Sbjct: 661 THRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM 720

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D   +N LI G CKS  L+ A   +  +  + +  ++ T+N ++ GL + G++
Sbjct: 721 LGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRI 780

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  + ++ME++ + PN + +  L  G  + +   + + L  +M  K  +P  S  + +
Sbjct: 781 GEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNAL 840

Query: 373 VD 374
           + 
Sbjct: 841 IS 842



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 177/388 (45%), Gaps = 35/388 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PN VTY  +ID LCK   VD+A+ + L+M+ ++I+P+VVT++S+I+G       ++A  
Sbjct: 376 SPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATE 435

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
               M ++G+ P+VVT+  ++D   K    D A  +   M+   V+ N F   +L++G  
Sbjct: 436 YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLR 495

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GKI  A  LF      G   D V+Y  LI+G  K  ++  A    +E++ + + P  V
Sbjct: 496 QNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAV 555

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN     L  + + + A     EM+   +  D STYNT I   C+ G   +A++L   +
Sbjct: 556 VYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL-----------PRRVLV-------- 293
            +   + ++  YN L+ GL  +G +E A  L   +            RRVL         
Sbjct: 616 KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRL 675

Query: 294 ----------------ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
                           AD+  YN ++  LC  G   KA  +  +M  + +AP+ I F  L
Sbjct: 676 DVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPD 365
           I G  + +          +M  + + P+
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPN 763



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 169/358 (47%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V Y T+IDGL K G +  A     ++   N+ PD V YN  I+ LC    + EAK    E
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTE 579

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M + G++P   T+N ++   C+ G+  +A +LL  M    ++PN  TY+TL+ G   TG 
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           + +A+ L   M S G     +++  ++    +++ ++  L ++  M++ G+   +  YNT
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L   L        A  + EEM    +A DT T+N  I G CK+ ++  A   +  +    
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              +I  +N L+ GL   GR+  A  +   + +  L  + +TY+I+  G        +A 
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAM 819

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            L+ +M      P V  +  LI  F +    ++  EL   M+++ V P +    ++V 
Sbjct: 820 RLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVS 877



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 157/315 (49%), Gaps = 14/315 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TYNT+I   C++G   KA  L  +MK  +I P+++TYN+L+ GL       +AK 
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+  G  PS +T   ++    ++ ++D    + + M+   +  +   Y+TL+   C
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G   +A  +   M   G   D +++N LI G+CK+  ++ A + Y +M+ + I P + 
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIA 765

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL  GL  + ++  A  +  EM++  +  +  TY+    G  K    VEA+ L+   
Sbjct: 766 TFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY--- 822

Query: 253 GILKCEL-------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
               CE+        +  YN LI    K+G +  A ELF+ + +R +     TY+I++ G
Sbjct: 823 ----CEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878

Query: 306 LCNDGQMDKAHDLFL 320
             +  +  K+ + + 
Sbjct: 879 WYDLAREQKSQNTYF 893



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 87/159 (54%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G    P+T+T+N +I G CK   +D A A + QM  +NI+P++ T+N+L+ GL      
Sbjct: 721 LGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRI 780

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA  +  EM   G++P+ +T++++     K     EA RL   MV +   P   TY+ L
Sbjct: 781 GEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNAL 840

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
           +  F   G + +A+ELF  M+  G      +Y+IL++G+
Sbjct: 841 ISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879


>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 198/391 (50%), Gaps = 45/391 (11%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKAL--FLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           CKPN +TYNTIID  C +G VD  KAL  F +M+ E + PD +T+NSLI      + W +
Sbjct: 265 CKPNLITYNTIIDA-CGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWED 323

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           ++R+F EM  +G++  + T+N ++D +CK G+M+ A+ ++  M  +++ PN  TYST++D
Sbjct: 324 SQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMID 383

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+   G    A  L+  M+  G + D VSYN LI+ Y K    ++AL+  ++M   G+K 
Sbjct: 384 GYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKA 443

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VVTYN L     +  + + A  LF++M+ + +  +  TY+  ID   K G   +A  +F
Sbjct: 444 DVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIF 503

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
                   + D+  Y+ LID  CK G +E A+ L + + +  +  ++VTYN +I     +
Sbjct: 504 VEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRN 563

Query: 310 GQMD------------------------------------------KAHDLFLDMEENAV 327
           GQ+D                                           A  +F +M++  +
Sbjct: 564 GQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDHTGVLAAVSVFHEMQQFGL 623

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
            PNV+ F  +++   R +   +   LL +M+
Sbjct: 624 KPNVVTFSAILNACSRCSSLQEASVLLEQMR 654



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 168/331 (50%), Gaps = 3/331 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN-DWNEAKRL 73
           N   Y+ ++    + G   +A  +F  MK     P+++TYN++I        D  +A  +
Sbjct: 233 NVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDI 292

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS-RLLDLMVQRDVRPNAFTYSTLMDGFC 132
           F EM  +GV+P  +TFN ++  +C  G + E S R+   M +R +  + FTY+TL+D  C
Sbjct: 293 FEEMQKEGVEPDRITFNSLI-AVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVC 351

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A  +  SM       + V+Y+ +I+GY K    EEA+ LY +M   G++P  V
Sbjct: 352 KGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRV 411

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNTL     ++ + + AL   ++M+R  + AD  TYN  ID   K G   +A  LF  +
Sbjct: 412 SYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKM 471

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++  Y+ LID   K+G  + A  +F    R  L  DVV Y+ +I   C  G +
Sbjct: 472 KAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLV 531

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           + A  L  +M +  + PN++ + +LI  + R
Sbjct: 532 EDAVVLLQEMTQAGIQPNIVTYNSLIDAYGR 562



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 177/355 (49%), Gaps = 3/355 (0%)

Query: 22  IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG 81
           +I  L + G V+ A  +F + +      +V  Y++++     +    EA ++F  M   G
Sbjct: 205 MISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAG 264

Query: 82  VQPSVVTFNVIMDELCKNG-KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR- 139
            +P+++T+N I+D   K G  + +A  + + M +  V P+  T+++L+   C  G +   
Sbjct: 265 CKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLI-AVCSRGSLWED 323

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           ++ +F  M+  G + D  +YN LI+  CK  ++E A S+   M  K I P VVTY+T+  
Sbjct: 324 SQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMID 383

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           G  ++   E A+ L+ +M+   V  D  +YNT ID   K G   +A+   + +  +  + 
Sbjct: 384 GYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKA 443

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           D+  YN LID   K G+ + A  LF  +    LV +V+TY+ +I      G    A  +F
Sbjct: 444 DVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIF 503

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           ++ +   + P+V+++ +LI    +       + LL +M +  + P+    + ++D
Sbjct: 504 VEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLID 558



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 160/321 (49%), Gaps = 3/321 (0%)

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVT--FNVIMDELCKNGKMDEASRLLDLMVQ 114
           L+  L +  +W  A + +  M+ QG   S  +   ++++  L + GK++ A  + +   +
Sbjct: 168 LLRELGNRGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQK 227

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK-EVE 173
                N + YS ++  +  +G+   A ++F +M+  GCK + ++YN +I+   K   +++
Sbjct: 228 AGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLK 287

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           +AL ++ EM  +G++P  +T+N+L          E + ++F EMQR  +  D  TYNT I
Sbjct: 288 KALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLI 347

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
           D +CK G +  A  +  ++ +     ++  Y+ +IDG  K G  E A+ L+  +    + 
Sbjct: 348 DAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVR 407

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            D V+YN +I      G+ D A     DME   +  +V+ +  LI  + +  K      L
Sbjct: 408 PDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGL 467

Query: 354 LHKMKEKKVMPDASIVSMVVD 374
             KMK + ++P+    S ++D
Sbjct: 468 FDKMKAEGLVPNVLTYSALID 488



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 142/288 (49%), Gaps = 9/288 (3%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           V  K + VTYN +ID   K+G    A  LF +MK E + P+V+TY++LI     A    +
Sbjct: 439 VGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQD 498

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +F E    G++P VV ++ ++D  CK G +++A  LL  M Q  ++PN  TY++L+D
Sbjct: 499 ATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLID 558

Query: 130 GFCLTGKINRAEELFGSM-----ESMGCKHDDVSYNILINGYCKNKE--VEEALSLYREM 182
            +   G+++  E   G+M       +G +  ++    L +    N    V  A+S++ EM
Sbjct: 559 AYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDHTGVLAAVSVFHEM 618

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
              G+KP VVT++ +         ++ A  L E+M+  D       +   + GL ++ + 
Sbjct: 619 QQFGLKPNVVTFSAILNACSRCSSLQEASVLLEQMRFFDSWVYGIAHGLLM-GLREHVW- 676

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           VEA  LF  +  +        YN L D L   G+ + A E+  +  RR
Sbjct: 677 VEAQRLFDEIARMDYATGAAFYNALTDVLWHFGQRQGAQEVVVAAKRR 724



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 118/245 (48%), Gaps = 5/245 (2%)

Query: 135 GKINRAEELFGSMESMGCKHDDVS--YNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           G+  RA + +  M   G    + S   +I+I+   +  +VE AL ++      G    V 
Sbjct: 176 GEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVY 235

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY-IVEAVELFRT 251
            Y+ +        +   ALK+F+ M++     +  TYNT ID   K G  + +A+++F  
Sbjct: 236 AYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEE 295

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRL-EIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
           +     E D   +N LI  +C  G L E +  +F  + RR +  D+ TYN +I  +C  G
Sbjct: 296 MQKEGVEPDRITFNSLI-AVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGG 354

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           QM+ A  +   M    ++PNV+ + T+I G+ ++    + I L H MKE  V PD    +
Sbjct: 355 QMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYN 414

Query: 371 MVVDL 375
            ++D+
Sbjct: 415 TLIDI 419



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 18/128 (14%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA-------N 65
           KPN VT++ I++   +   + +A  L  QM+          ++S ++G+ H        +
Sbjct: 624 KPNVVTFSAILNACSRCSSLQEASVLLEQMR---------FFDSWVYGIAHGLLMGLREH 674

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            W EA+RLF E+           +N + D L   G+   A  ++    +R V  NA+  S
Sbjct: 675 VWVEAQRLFDEIARMDYATGAAFYNALTDVLWHFGQRQGAQEVVVAAKRRQVWENAWWRS 734

Query: 126 TLMDGFCL 133
                FCL
Sbjct: 735 EQQ--FCL 740


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 183/364 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+T TY ++I G C++  +D A  +F QM  E   P+ VTY++LI+GLC +   NEA  
Sbjct: 247 SPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD 306

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+  G+ P+  T    +  LC  G  ++A RL   M  +   PN +TY+ L+ G C
Sbjct: 307 LIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLC 366

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           ++G +  A  LF  M   G   + V+YN LIN   +N+ ++ A  +   M   G  P +V
Sbjct: 367 VSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIV 426

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN +  G   +   + A+ +   M +   +A+  TYNT I G C +G    A+ +   +
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C+ D  +Y  LI G CK  ++E A  LF  +    L  + VTY  +I G C D ++
Sbjct: 487 RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  L   M+ +   PNV  +  LIHG  + N  S   EL   M E+ + P+    + +
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 606

Query: 373 VDLL 376
           +D L
Sbjct: 607 IDGL 610



 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 185/389 (47%), Gaps = 35/389 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDK-----------------------------------AK 36
           C+PNTVTY+T+I+GLC  G V++                                   A 
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340

Query: 37  ALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
            LF+ MK +   P+V TY +LI GLC +     A  LF  M   GV P+ VT+N +++ L
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 400

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
            +N ++  A  +L+LM +    PN  TY+ ++ G+C+ G   +A  +  +M   G   + 
Sbjct: 401 VENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANL 460

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           V+YN +I GYC +     AL +   M   G KP   +Y  L  G  +I ++E A  LF E
Sbjct: 461 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNE 520

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M  D +  +  TY   IDG CK+  +  A  L   +    C  ++Q YN LI GL K   
Sbjct: 521 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 580

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
              A EL + +    +  +VVTY  MI GLC +G    A ++F  M E    PN++ + +
Sbjct: 581 FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSS 640

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LI    +  K  +   L  +++   ++PD
Sbjct: 641 LIRALGQEGKVEEAENLFAELERHGLIPD 669



 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/328 (33%), Positives = 170/328 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNTVTYN +I+ L +   +  A  +   M     +P++VTYN +I G C   D  +A  +
Sbjct: 388 PNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLV 447

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+ +G   ++VT+N I+   C +G    A R+LDLM     +P+ ++Y+ L+ GFC 
Sbjct: 448 MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 507

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+  A  LF  M   G   ++V+Y  LI+GYCK+++++ A SL   M   G +P V T
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  GL + +    A +L + M  + +  +  TY   IDGLCKNG    A+E+F  + 
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  ++  Y+ LI  L + G++E A  LF  L R  L+ D +TY  MI      G+++
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 687

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            A +    M +    P +  +  LI G 
Sbjct: 688 HAFNFLGRMIKAGCQPTLWTYGVLIKGL 715



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 179/384 (46%), Gaps = 24/384 (6%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  +IDG CK+  +D A +L   MK     P+V TYN LIHGL   N+++ A+ L
Sbjct: 528 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 587

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+++G+ P+VVT+  ++D LCKNG    A  + + M+++   PN  TYS+L+     
Sbjct: 588 CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 647

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  AE LF  +E  G   D+++Y  +I  Y  + +VE A +    M+  G +PT+ T
Sbjct: 648 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 707

Query: 194 YNTLFLGL------------------------FEIHQVEHALKLFEEMQRDDVAADTSTY 229
           Y  L  GL                        ++    +    +  ++   D        
Sbjct: 708 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           N  +  L   G   EA EL  ++       D +AYN L+  L +   +++A+ +F+ +  
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
           +     +  Y  +I  LC   +  +A   F +M      P+ ++   LI G +R      
Sbjct: 828 QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDL 887

Query: 350 VIELLHKMKEKKVMPDASIVSMVV 373
            +E LH M+ ++ MP   I +++ 
Sbjct: 888 CMEFLHIMETRRYMPSFHIYTILA 911



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 150/301 (49%), Gaps = 6/301 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYN +I G C  G   KA  +   M     + ++VTYN++I G C + +   A 
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R+   M D G +P   ++  ++   CK  KM+ A  L + MV   + PN  TY+ L+DG+
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++ A  L   M+  GC+ +  +YN+LI+G  K      A  L + M+ +GI P V
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY  +  GL +      AL++F +M       +  TY++ I  L + G + EA  LF  
Sbjct: 601 VTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE 660

Query: 252 L---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           L   G++  E+    Y  +I+    SG++E A      + +      + TY ++I GL N
Sbjct: 661 LERHGLIPDEI---TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN 717

Query: 309 D 309
           +
Sbjct: 718 E 718



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 144/300 (48%), Gaps = 1/300 (0%)

Query: 62  CHANDWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           CH+ +       F +M+ Q G++  +  ++ ++  L + G           M+   V+PN
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
              Y+ +++  C  G +  AE +   +       D  +Y  +I G+C+  +++ AL ++ 
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           +M  +G +P  VTY+TL  GL +  +V  A  L  EM    +     T    I  LC  G
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
              +A  LF  +    CE ++  Y  LI GLC SG L++A+ LF  + R  +  + VTYN
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +I+ L  + ++  A  +   M  N  +PN++ +  +I G+  +  P K + +++ M ++
Sbjct: 395 ALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 98/198 (49%)

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
           Y  M+S+G++P ++ YN +   L +   V  A  + +++   +++ DT TY + I G C+
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 262

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
              +  A+++F  +    CE +   Y+ LI+GLC SGR+  A +L R +    ++    T
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
               I  LC+ G  + A  LF+DM+     PNV  +  LI G          I L H+M 
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382

Query: 359 EKKVMPDASIVSMVVDLL 376
              V P+    + ++++L
Sbjct: 383 RDGVFPNTVTYNALINIL 400


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 202/397 (50%), Gaps = 38/397 (9%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N    NTI+  LCK+G +DKA  L  +M+   I P+VV+YN+++   C   + + A+ +F
Sbjct: 441 NVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVF 500

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M+++G++P+  T+++++D   KN        +++ M   ++  N   Y T+++G C  
Sbjct: 501 SNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKV 560

Query: 135 GKINRAEELFGSM--ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           G+ ++A EL  +M  E   C    +SYN +I+G+ K  E++ A++ Y EM + GI P V+
Sbjct: 561 GQTSKARELLANMIEEKRFCV-SCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVI 619

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF--- 249
           TY +L  GL + ++++ AL++ +EM+   V  D   Y   I G CK   +  A  LF   
Sbjct: 620 TYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSEL 679

Query: 250 -------------------RTLGILKCELDIQ-------------AYNCLIDGLCKSGRL 277
                              R LG +   LD+               Y  LIDGL K G L
Sbjct: 680 LEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNL 739

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
            +A +L+  +    LV D + Y ++++GL   GQ  K   +F +M++N V PNV+I+  +
Sbjct: 740 ILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAV 799

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           I G  R     +   L  +M +K ++PD +   ++V 
Sbjct: 800 IAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVS 836



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 181/342 (52%), Gaps = 1/342 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN  TY+ +IDG  K         +  QM   NI  + V Y ++I+GLC     ++A+ 
Sbjct: 509 KPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARE 568

Query: 73  LFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           L   M+++     S +++N I+D   K G+MD A    + M    + PN  TY++LMDG 
Sbjct: 569 LLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGL 628

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++++A E+   M++ G K D  +Y  LI+G+CK   +E A +L+ E++ +G+ P+ 
Sbjct: 629 CKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQ 688

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             YN+L  G   +  +  AL L+++M +D +  D  TY T IDGL K G ++ A +L+  
Sbjct: 689 PVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTE 748

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +    D   Y  +++GL K G+    +++F  + +  +  +V+ YN +I G   +G 
Sbjct: 749 MQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGN 808

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
           +D+A  L  +M +  + P+   F  L+ G V   +P +   L
Sbjct: 809 LDEAFRLHDEMLDKGILPDGATFDILVSGKVGKFQPIRAASL 850



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 198/400 (49%), Gaps = 37/400 (9%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +C P+  TY ++I    K+G ++ A     +M  + I+ +VV   SLI G C  ND   A
Sbjct: 298 LCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSA 357

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             LF++M ++G  P+ VTF+V+++   KNG+M++A      M    + P+ F   T++ G
Sbjct: 358 LDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQG 417

Query: 131 F----------------------------------CLTGKINRAEELFGSMESMGCKHDD 156
           +                                  C  GKI++A EL   MES G   + 
Sbjct: 418 WLKGQKHEEALKLFDESFETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNV 477

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           VSYN ++  +C+ K ++ A +++  M+ KG+KP   TY+ L  G F+ H  ++ L++  +
Sbjct: 478 VSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQ 537

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK--CELDIQAYNCLIDGLCKS 274
           M   ++  +   Y T I+GLCK G   +A EL   +   K  C +   +YN +IDG  K 
Sbjct: 538 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFC-VSCMSYNSIIDGFIKE 596

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G ++ A+  +  +    +  +V+TY  ++ GLC + +MD+A ++  +M+   V  ++  +
Sbjct: 597 GEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 656

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             LIHGF + +       L  ++ E+ + P   + + ++ 
Sbjct: 657 GALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLIS 696



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 202/431 (46%), Gaps = 72/431 (16%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN+VT++ +I+   K G ++KA   + +M+   + P V   +++I G        EA +L
Sbjct: 371 PNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKL 430

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E  + G+  +V   N I+  LCK GK+D+A+ LL  M  R + PN  +Y+ +M   C 
Sbjct: 431 FDESFETGLA-NVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCR 489

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              ++ A  +F +M   G K ++ +Y+ILI+G  KN + +  L +  +M S  I+   V 
Sbjct: 490 KKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVV 549

Query: 194 YNTLFLGLFEIHQ------------------------------------VEHALKLFEEM 217
           Y T+  GL ++ Q                                    +++A+  +EEM
Sbjct: 550 YQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEM 609

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
             + ++ +  TY + +DGLCKN  + +A+E+   +     +LDI AY  LI G CK   +
Sbjct: 610 CANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNM 669

Query: 278 E-----------------------------------IALELFRSLPRRVLVADVVTYNIM 302
           E                                    AL+L++ + +  L  D+ TY  +
Sbjct: 670 ESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 729

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I GL  +G +  A DL+ +M+   + P+ I++  +++G  +  +  KV+++  +MK+  V
Sbjct: 730 IDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 789

Query: 363 MPDASIVSMVV 373
            P+  I + V+
Sbjct: 790 TPNVLIYNAVI 800



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 2/314 (0%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGV-QPSVVTFNVIMDELCKNGKMDEASR 107
           PD + Y+  +   C   +   A  L  EM ++ +  PS  T+  ++    K G M++A R
Sbjct: 265 PDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIR 324

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
             D MV   +  N    ++L+ G C    +  A +LF  ME+ G   + V++++LI  + 
Sbjct: 325 WKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFS 384

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           KN E+E+AL  Y++M S G+ P+V   +T+  G  +  + E ALKLF+E     + A+  
Sbjct: 385 KNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVF 443

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
             NT +  LCK G I +A EL R +       ++ +YN ++   C+   +++A  +F ++
Sbjct: 444 ICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNM 503

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
             + L  +  TY+I+I G   +       ++   M  + +  N +++ T+I+G  ++ + 
Sbjct: 504 LEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQT 563

Query: 348 SKVIELLHKMKEKK 361
           SK  ELL  M E+K
Sbjct: 564 SKARELLANMIEEK 577



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 140/314 (44%), Gaps = 2/314 (0%)

Query: 53  TYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM 112
            +N L++        + A  +  +M++ GV P V   N  +  L +   + EA  L   M
Sbjct: 164 AFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRM 223

Query: 113 VQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
           V   V  +  T   LM       K   A E+F      G + D + Y++ +   CK   +
Sbjct: 224 VAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNL 283

Query: 173 EEALSLYREMVSKGI-KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
             A SL REM  K +  P+  TY ++ L   +   +E A++  +EM  D ++ +     +
Sbjct: 284 AMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATS 343

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            I G CKN  +  A++LF  +       +   ++ LI+   K+G +E ALE ++ +    
Sbjct: 344 LITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLG 403

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
           L   V   + +I G     + ++A  LF +  E  +A NV I  T++    +  K  K  
Sbjct: 404 LTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFICNTILSWLCKQGKIDKAT 462

Query: 352 ELLHKMKEKKVMPD 365
           ELL KM+ + + P+
Sbjct: 463 ELLRKMESRGIGPN 476



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 127/275 (46%), Gaps = 1/275 (0%)

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           G + +   FN +++   K+ + D A  +++ M++  V P     +  +        I  A
Sbjct: 157 GFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEA 216

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
           +EL+  M ++G   D+ +  +L+    + ++  EAL ++   + +G +P  + Y+     
Sbjct: 217 KELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQA 276

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTS-TYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
             +   +  A  L  EM+   +   +  TY + I    K G + +A+     +      +
Sbjct: 277 CCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISM 336

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           ++ A   LI G CK+  L  AL+LF  +       + VT++++I     +G+M+KA + +
Sbjct: 337 NVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFY 396

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
             ME   + P+V    T+I G+++  K  + ++L 
Sbjct: 397 KKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLF 431



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 104/233 (44%), Gaps = 1/233 (0%)

Query: 143 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 202
           L  S +  G + +  ++N L+N Y K+++ + A+ +  +M+  G+ P V   N     L 
Sbjct: 149 LVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALV 208

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ 262
           + + +  A +L+  M    V  D  T    +    +     EA+E+F        E D  
Sbjct: 209 QRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSL 268

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVL-VADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
            Y+  +   CK+  L +A  L R +  + L V    TY  +I      G M+ A     +
Sbjct: 269 LYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDE 328

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           M  + ++ NV+   +LI G  + N     ++L +KM+ +   P++   S++++
Sbjct: 329 MVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIE 381


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 194/366 (53%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC P+ +T+ ++IDGL K G VD A  ++ +M   +   + + Y SLI    +     + 
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            +++ +M++Q   P +   N  MD + K G+ ++   + + +  R   P+A +YS L+ G
Sbjct: 502 HKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHG 561

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               G  N   ELF SM+  GC  D  +YNI+I+G+CK  +V +A  L  EM +KG +PT
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY ++  GL +I +++ A  LFEE +   +  +   Y++ IDG  K G I EA  +  
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            L       ++  +N L+D L K+  +  AL  F+S+       + VTY I+I+GLC   
Sbjct: 682 ELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           + +KA   + +M++  + P+ I + T+I G  +    ++   L  + K    +PD++  +
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYN 801

Query: 371 MVVDLL 376
            +++ L
Sbjct: 802 AMIEGL 807



 Score =  197 bits (500), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 196/363 (53%), Gaps = 1/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + YN I+  L K G VD+A  +F +MK ++  P++ TYN LI  LC A   + A  L
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALRVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDCAFEL 399

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   G+ P+V T N+++D LCK+ K+DEA  + + M  +   P+  T+ +L+DG   
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGK 459

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A +++  M    C+ + + Y  LI  +  +   E+   +Y++MV++   P +  
Sbjct: 460 VGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQL 519

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            NT    +F+  + E    +FEE++      D  +Y+  I GL K G+  E  ELF ++ 
Sbjct: 520 LNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMK 579

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C LD +AYN +IDG CK G++  A +L   +  +     VVTY  +I GL    ++D
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A+ LF + +   +  NV+I+ +LI GF ++ +  +   +L ++ +K + P+    + ++
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLL 699

Query: 374 DLL 376
           D L
Sbjct: 700 DAL 702



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 202/434 (46%), Gaps = 71/434 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN------------------------ 48
           +P    + T+I G  KEG VD A +L  +MK  +++                        
Sbjct: 200 EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWK 259

Query: 49  -----------PDVVTYNSLIHGLCHANDWNEAKRLF----------------------- 74
                      PD VTY S+I  LC AN  +EA  +F                       
Sbjct: 260 FFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYG 319

Query: 75  --------FEMMD----QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
                   + +++    +G  PSV+ +N I+  L K GK+DEA R+ + M ++D  PN  
Sbjct: 320 SAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM-KKDAAPNLS 378

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TY+ L+D  C  GK++ A EL  SM+  G   +  + NI+++  CK+++++EA +++ +M
Sbjct: 379 TYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQM 438

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
             K   P  +T+ +L  GL ++ +V+ A K++E+M   D   ++  Y + I     +G  
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRK 498

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            +  ++++ +    C  D+Q  N  +D + K+G  E    +F  +  R  V D  +Y+I+
Sbjct: 499 EDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSIL 558

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           IHGL   G  ++ ++LF  M+E     +   +  +I GF +  K +K  +LL +MK K  
Sbjct: 559 IHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618

Query: 363 MPDASIVSMVVDLL 376
            P       V+D L
Sbjct: 619 EPTVVTYGSVIDGL 632



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 180/363 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN +ID LC+ G +D A  L   M+   + P+V T N ++  LC +   +EA  +
Sbjct: 375 PNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAI 434

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M  +   P  +TF  ++D L K G++D+A ++ + M+  D R N+  Y++L+  F  
Sbjct: 435 FEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFN 494

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+     +++  M +  C  D    N  ++   K  E E+  +++ E+ S+   P   +
Sbjct: 495 HGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARS 554

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  GL +        +LF  M+      DT  YN  IDG CK G + +A +L   + 
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E  +  Y  +IDGL K  RL+ A  LF     + +  +VV Y+ +I G    G++D
Sbjct: 615 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 674

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A+ +  ++ +  + PNV  + +L+   V+  + ++ +     MKE K  P+     +++
Sbjct: 675 EAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734

Query: 374 DLL 376
           + L
Sbjct: 735 NGL 737



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 151/271 (55%), Gaps = 4/271 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +T  YN +IDG CK G V+KA  L  +MK +   P VVTY S+I GL   +  +EA 
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF E   + ++ +VV ++ ++D   K G++DEA  +L+ ++Q+ + PN +T+++L+D  
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDAL 702

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +IN A   F SM+ + C  + V+Y ILING CK ++  +A   ++EM  +G+KP+ 
Sbjct: 703 VKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPST 762

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++Y T+  GL +   +  A  LF+  + +    D++ YN  I+GL      ++A  LF  
Sbjct: 763 ISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEE 822

Query: 252 LGILKCELDIQAYNC--LIDGLCKSGRLEIA 280
               +  L I    C  L+D L K+  LE A
Sbjct: 823 --TRRRGLHIHNKTCVVLLDTLHKNDCLEQA 851



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 178/364 (48%), Gaps = 1/364 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P    Y T+I         D    LF QM+     P V  + +LI G       + A  
Sbjct: 165 RPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALS 224

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM    +   +V +NV +D   K GK+D A +    +    ++P+  TY++++   C
Sbjct: 225 LLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLC 284

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +++ A E+F  +E         +YN +I GY    + +EA SL     +KG  P+V+
Sbjct: 285 KANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVI 344

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN +   L ++ +V+ AL++FEEM++ D A + STYN  ID LC+ G +  A EL  ++
Sbjct: 345 AYNCILTCLRKMGKVDEALRVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDCAFELRDSM 403

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +++  N ++D LCKS +L+ A  +F  +  +V   D +T+  +I GL   G++
Sbjct: 404 QKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRV 463

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A+ ++  M ++    N I++ +LI  F    +     ++   M  +   PD  +++  
Sbjct: 464 DDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTY 523

Query: 373 VDLL 376
           +D +
Sbjct: 524 MDCM 527



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 178/363 (49%), Gaps = 1/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T N ++D LCK   +D+A A+F QM  +   PD +T+ SLI GL      ++A ++
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKI 469

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +M+D   + + + +  ++     +G+ ++  ++   MV ++  P+    +T MD    
Sbjct: 470 YEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFK 529

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+  +   +F  ++S     D  SY+ILI+G  K     E   L+  M  +G       
Sbjct: 530 AGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA 589

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  G  +  +V  A +L EEM+         TY + IDGL K   + EA  LF    
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             + EL++  Y+ LIDG  K GR++ A  +   L ++ L  +V T+N ++  L    +++
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEIN 709

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA-SIVSMV 372
           +A   F  M+E    PN + +  LI+G  ++ K +K      +M+++ + P   S  +M+
Sbjct: 710 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMI 769

Query: 373 VDL 375
             L
Sbjct: 770 SGL 772



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 137/279 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +Y+ +I GL K GF ++   LF  MK +    D   YN +I G C     N+A +L
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G +P+VVT+  ++D L K  ++DEA  L +    + +  N   YS+L+DGF  
Sbjct: 610 LEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGK 669

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+I+ A  +   +   G   +  ++N L++   K +E+ EAL  ++ M      P  VT
Sbjct: 670 VGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT 729

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL ++ +   A   ++EMQ+  +   T +Y T I GL K G I EA  LF    
Sbjct: 730 YGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFK 789

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
                 D   YN +I+GL    R   A  LF    RR L
Sbjct: 790 ANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 154/324 (47%), Gaps = 1/324 (0%)

Query: 53  TYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM 112
           +YNSL+  +    +++   ++  EM   G  PSV T   ++    K  K+ E   ++  M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNM 159

Query: 113 VQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
            +   RP    Y+TL+  F      +    LF  M+ +G +     +  LI G+ K   V
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           + ALSL  EM S  +   +V YN       ++ +V+ A K F E++ + +  D  TY + 
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           I  LCK   + EAVE+F  L   +      AYN +I G   +G+ + A  L      +  
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
           +  V+ YN ++  L   G++D+A  +F +M+++A APN+  +  LI    R  K     E
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDA-APNLSTYNILIDMLCRAGKLDCAFE 398

Query: 353 LLHKMKEKKVMPDASIVSMVVDLL 376
           L   M++  + P+   V+++VD L
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRL 422



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 161/374 (43%), Gaps = 34/374 (9%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           +YN+++  + +    D    +  +M      P V T   ++     AN   E   +   M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNM 159

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
                +P+   +  ++         D    L   M +    P    ++TL+ GF   G++
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  L   M+S     D V YN+ I+ + K  +V+ A   + E+ + G+KP  VTY ++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF---RTLG- 253
              L + ++++ A+++FE ++++     T  YNT I G    G   EA  L    R  G 
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339

Query: 254 ---------ILKC---------------------ELDIQAYNCLIDGLCKSGRLEIALEL 283
                    IL C                       ++  YN LID LC++G+L+ A EL
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAFEL 399

Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
             S+ +  L  +V T NIM+  LC   ++D+A  +F  M+     P+ I F +LI G  +
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGK 459

Query: 344 INKPSKVIELLHKM 357
           + +     ++  KM
Sbjct: 460 VGRVDDAYKIYEKM 473



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 104/231 (45%), Gaps = 5/231 (2%)

Query: 137 INRAEELFGSMESMG-CKHDDVSYN--ILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +NRA E F   E      H   SYN  +L+   C+N +  +   +  EM   G  P+V T
Sbjct: 78  VNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALD--QILGEMSVAGFGPSVNT 135

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
              + L   + +++     + + M++       S Y T I       +    + LF+ + 
Sbjct: 136 CIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQ 195

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            L  E  +  +  LI G  K GR++ AL L   +    L AD+V YN+ I      G++D
Sbjct: 196 ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVD 255

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            A   F ++E N + P+ + + ++I    + N+  + +E+   +++ + +P
Sbjct: 256 MAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 306



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 54/94 (57%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+T++Y T+I GL K G + +A ALF + K     PD   YN++I GL + N   +A  
Sbjct: 759 KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFS 818

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           LF E   +G+     T  V++D L KN  +++A+
Sbjct: 819 LFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAA 852


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 193/391 (49%), Gaps = 35/391 (8%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND----------- 66
           ++  ++DGLCK+G V +AKAL  ++  +   P V+TYN+L++G     D           
Sbjct: 194 SWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLM 253

Query: 67  -----------------W-------NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKM 102
                            W        EA++LF EM+ +G++P V  +  I++  CK G M
Sbjct: 254 EKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNM 313

Query: 103 DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
             A  L D M +R + PNA+TY  L++G C  G++  AE +   M+S G   + V +N L
Sbjct: 314 KRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTL 373

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           ++GYCK   ++EAL L   M  KG +    T N +  G    ++ E A +L   M+   V
Sbjct: 374 MDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGV 433

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
           A +  +++  ID  CK     EA  LF+ +        +  YN  I+  CK G++E A +
Sbjct: 434 APNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYK 493

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           L   +  R L+ D  TY  +I G    G +D+A +LF +M +  +  NV+ +  +I G  
Sbjct: 494 LINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLS 553

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +  +  +  +L  +M ++ ++PD  I S ++
Sbjct: 554 KDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 584



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/300 (34%), Positives = 162/300 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+   Y +II+  CK G + +A  LF +M    + P+  TY +LI+G C A +   A+ 
Sbjct: 294 EPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEM 353

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M  +GV  + V FN +MD  CK G +DEA RL ++M Q+    +AFT + +  GFC
Sbjct: 354 MVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFC 413

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            + +   A+ L  +ME  G   + VS++ILI+ YCK +   EA  L++ M  KG  P+VV
Sbjct: 414 RSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVV 473

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN       +  ++E A KL  EMQ   +  DT TY + IDG   +G +  A+ELF  +
Sbjct: 474 TYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEM 533

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             L    ++  Y  +I GL K GR + A +L+  + +  +V D   Y+ +I  L   G +
Sbjct: 534 PQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 593



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 170/334 (50%)

Query: 41  QMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
           QM    I   V ++ +++ GLC   +   AK L  E++ +G +PSV+T+N +++   +  
Sbjct: 182 QMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIK 241

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
            +   + +L LM +  V  N  TY+ L++ +  + KI  AE+LF  M   G + D   Y 
Sbjct: 242 DVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYT 301

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            +IN  CK   ++ A  L+ EM  + + P   TY  L  G  +  +++ A  +  +MQ  
Sbjct: 302 SIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSK 361

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            V  +   +NT +DG CK G I EA+ L   +     E+D    N +  G C+S R E A
Sbjct: 362 GVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEA 421

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
             L  ++  R +  +VV+++I+I   C +    +A  LF  ME+   AP+V+ +   I  
Sbjct: 422 KRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIER 481

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + +  K  +  +L+++M+E+ +MPD    + ++D
Sbjct: 482 YCKKGKMEEAYKLINEMQERGLMPDTYTYTSLID 515



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/235 (35%), Positives = 130/235 (55%), Gaps = 4/235 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKAL--FLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           N V +NT++DG CK+G +D+A  L   +Q KG  I  D  T N +  G C +N   EAKR
Sbjct: 366 NRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEI--DAFTCNIIASGFCRSNRREEAKR 423

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M ++GV P+VV+F++++D  CK     EA RL  +M ++   P+  TY+  ++ +C
Sbjct: 424 LLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYC 483

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A +L   M+  G   D  +Y  LI+G   +  V+ AL L+ EM   G+   VV
Sbjct: 484 KKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVV 543

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           TY  +  GL +  + + A KL++EM ++ +  D   Y++ I  L K G +V  +E
Sbjct: 544 TYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLE 598



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 134/269 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY  +I+G CK G +  A+ +   M+ + ++ + V +N+L+ G C     +EA RL
Sbjct: 330 PNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRL 389

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +G +    T N+I    C++ + +EA RLL  M +R V PN  ++S L+D +C 
Sbjct: 390 QNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCK 449

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
                 A  LF  ME  G     V+YN  I  YCK  ++EEA  L  EM  +G+ P   T
Sbjct: 450 EQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYT 509

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +L  G      V+ AL+LF EM +  +  +  TY   I GL K+G   EA +L+  + 
Sbjct: 510 YTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMN 569

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALE 282
                 D   Y+ LI  L K G L   LE
Sbjct: 570 KEGIVPDDGIYSSLIASLHKVGPLVSGLE 598



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 136/304 (44%), Gaps = 35/304 (11%)

Query: 96  LCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHD 155
           L ++G M+     L  MV   +     +++ ++DG C  G++ RA+ L   +   G K  
Sbjct: 167 LKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPS 226

Query: 156 DVSYNILING-----------------------------------YCKNKEVEEALSLYR 180
            ++YN L+NG                                   Y ++ ++EEA  L+ 
Sbjct: 227 VITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFD 286

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           EM+ KGI+P V  Y ++     +   ++ A  LF+EM    +  +  TY   I+G CK G
Sbjct: 287 EMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAG 346

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            +  A  +   +     +++   +N L+DG CK G ++ AL L   + ++    D  T N
Sbjct: 347 EMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCN 406

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           I+  G C   + ++A  L L MEE  VAPNV+ F  LI  + +    ++   L   M++K
Sbjct: 407 IIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKK 466

Query: 361 KVMP 364
              P
Sbjct: 467 GKAP 470



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/344 (22%), Positives = 129/344 (37%), Gaps = 80/344 (23%)

Query: 64  ANDWNEAKRLFFEMMDQGVQPSVVT------FNVIMDELCKNGKMDEASRLLDLMVQRDV 117
            N W+  +R+   +  +  +PS+V       F V MD    N   D +  + D   ++  
Sbjct: 98  GNLWSNVERIVSSIGGEFNEPSIVEKFCDMLFRVYMD----NRMFDSSLEVFDYARKKGF 153

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
             +  +    +     +G +    E    M   G +    S+  +++G CK  EV  A +
Sbjct: 154 EIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKA 213

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG-- 235
           L  E+V KG KP+V+TY                                   NT ++G  
Sbjct: 214 LMDELVCKGFKPSVITY-----------------------------------NTLLNGYI 238

Query: 236 ---------------------------------LCKNGYIVEAVELFRTLGILKCELDIQ 262
                                              ++  I EA +LF  +     E D+ 
Sbjct: 239 EIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVY 298

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
            Y  +I+  CK G ++ A  LF  +  R LV +  TY  +I+G C  G+M  A  +  DM
Sbjct: 299 IYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDM 358

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +   V  N +IF TL+ G+ +     + + L + M++K    DA
Sbjct: 359 QSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDA 402



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 91/189 (48%), Gaps = 2/189 (1%)

Query: 188 KPTVVTY--NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           +P++V    + LF    +    + +L++F+  ++     D  +   F+  L ++G +   
Sbjct: 117 EPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELC 176

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           VE  R +     E+ + ++  ++DGLCK G +  A  L   L  +     V+TYN +++G
Sbjct: 177 VEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNG 236

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
                 +   +++   ME+N V  NV  +  LI  + R +K  +  +L  +M +K + PD
Sbjct: 237 YIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPD 296

Query: 366 ASIVSMVVD 374
             I + +++
Sbjct: 297 VYIYTSIIN 305


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 193/391 (49%), Gaps = 35/391 (8%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND----------- 66
           ++  ++DGLCK+G V +AKAL  ++  +   P V+TYN+L++G     D           
Sbjct: 190 SWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLM 249

Query: 67  -----------------W-------NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKM 102
                            W        EA++LF EM+ +G++P V  +  I++  CK G M
Sbjct: 250 EKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNM 309

Query: 103 DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
             A  L D M +R + PNA+TY  L++G C  G++  AE +   M+S G   + V +N L
Sbjct: 310 KRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTL 369

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           ++GYCK   ++EAL L   M  KG +    T N +  G    ++ E A +L   M+   V
Sbjct: 370 MDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGV 429

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
           A +  +++  ID  CK     EA  LF+ +        +  YN  I+  CK G++E A +
Sbjct: 430 APNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYK 489

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           L   +  R L+ D  TY  +I G    G +D+A +LF +M +  +  NV+ +  +I G  
Sbjct: 490 LINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLS 549

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +  +  +  +L  +M ++ ++PD  I S ++
Sbjct: 550 KDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 580



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/300 (34%), Positives = 162/300 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+   Y +II+  CK G + +A  LF +M    + P+  TY +LI+G C A +   A+ 
Sbjct: 290 EPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEM 349

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M  +GV  + V FN +MD  CK G +DEA RL ++M Q+    +AFT + +  GFC
Sbjct: 350 MVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFC 409

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            + +   A+ L  +ME  G   + VS++ILI+ YCK +   EA  L++ M  KG  P+VV
Sbjct: 410 RSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVV 469

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN       +  ++E A KL  EMQ   +  DT TY + IDG   +G +  A+ELF  +
Sbjct: 470 TYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEM 529

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             L    ++  Y  +I GL K GR + A +L+  + +  +V D   Y+ +I  L   G +
Sbjct: 530 PQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 589



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 170/334 (50%)

Query: 41  QMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
           QM    I   V ++ +++ GLC   +   AK L  E++ +G +PSV+T+N +++   +  
Sbjct: 178 QMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIK 237

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
            +   + +L LM +  V  N  TY+ L++ +  + KI  AE+LF  M   G + D   Y 
Sbjct: 238 DVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYT 297

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            +IN  CK   ++ A  L+ EM  + + P   TY  L  G  +  +++ A  +  +MQ  
Sbjct: 298 SIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSK 357

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            V  +   +NT +DG CK G I EA+ L   +     E+D    N +  G C+S R E A
Sbjct: 358 GVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEA 417

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
             L  ++  R +  +VV+++I+I   C +    +A  LF  ME+   AP+V+ +   I  
Sbjct: 418 KRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIER 477

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + +  K  +  +L+++M+E+ +MPD    + ++D
Sbjct: 478 YCKKGKMEEAYKLINEMQERGLMPDTYTYTSLID 511



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/235 (35%), Positives = 130/235 (55%), Gaps = 4/235 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKAL--FLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           N V +NT++DG CK+G +D+A  L   +Q KG  I  D  T N +  G C +N   EAKR
Sbjct: 362 NRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEI--DAFTCNIIASGFCRSNRREEAKR 419

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M ++GV P+VV+F++++D  CK     EA RL  +M ++   P+  TY+  ++ +C
Sbjct: 420 LLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYC 479

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A +L   M+  G   D  +Y  LI+G   +  V+ AL L+ EM   G+   VV
Sbjct: 480 KKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVV 539

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           TY  +  GL +  + + A KL++EM ++ +  D   Y++ I  L K G +V  +E
Sbjct: 540 TYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLE 594



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 134/269 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY  +I+G CK G +  A+ +   M+ + ++ + V +N+L+ G C     +EA RL
Sbjct: 326 PNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRL 385

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +G +    T N+I    C++ + +EA RLL  M +R V PN  ++S L+D +C 
Sbjct: 386 QNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCK 445

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
                 A  LF  ME  G     V+YN  I  YCK  ++EEA  L  EM  +G+ P   T
Sbjct: 446 EQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYT 505

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +L  G      V+ AL+LF EM +  +  +  TY   I GL K+G   EA +L+  + 
Sbjct: 506 YTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMN 565

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALE 282
                 D   Y+ LI  L K G L   LE
Sbjct: 566 KEGIVPDDGIYSSLIASLHKVGPLVSGLE 594



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 136/304 (44%), Gaps = 35/304 (11%)

Query: 96  LCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHD 155
           L ++G M+     L  MV   +     +++ ++DG C  G++ RA+ L   +   G K  
Sbjct: 163 LKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPS 222

Query: 156 DVSYNILING-----------------------------------YCKNKEVEEALSLYR 180
            ++YN L+NG                                   Y ++ ++EEA  L+ 
Sbjct: 223 VITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFD 282

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           EM+ KGI+P V  Y ++     +   ++ A  LF+EM    +  +  TY   I+G CK G
Sbjct: 283 EMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAG 342

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            +  A  +   +     +++   +N L+DG CK G ++ AL L   + ++    D  T N
Sbjct: 343 EMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCN 402

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           I+  G C   + ++A  L L MEE  VAPNV+ F  LI  + +    ++   L   M++K
Sbjct: 403 IIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKK 462

Query: 361 KVMP 364
              P
Sbjct: 463 GKAP 466



 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 77/344 (22%), Positives = 129/344 (37%), Gaps = 80/344 (23%)

Query: 64  ANDWNEAKRLFFEMMDQGVQPSVVT------FNVIMDELCKNGKMDEASRLLDLMVQRDV 117
            N W+  +R+   +  +  +PS+V       F V MD    N   D +  + D   ++  
Sbjct: 94  GNLWSNVERIVSSIGGEFNEPSIVEKFCDMLFRVYMD----NRMFDSSLEVFDYARKKGF 149

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
             +  +    +     +G +    E    M   G +    S+  +++G CK  EV  A +
Sbjct: 150 EIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKA 209

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG-- 235
           L  E+V KG KP+V+T                                   YNT ++G  
Sbjct: 210 LMDELVCKGFKPSVIT-----------------------------------YNTLLNGYI 234

Query: 236 ---------------------------------LCKNGYIVEAVELFRTLGILKCELDIQ 262
                                              ++  I EA +LF  +     E D+ 
Sbjct: 235 EIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVY 294

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
            Y  +I+  CK G ++ A  LF  +  R LV +  TY  +I+G C  G+M  A  +  DM
Sbjct: 295 IYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDM 354

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +   V  N +IF TL+ G+ +     + + L + M++K    DA
Sbjct: 355 QSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDA 398



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 91/189 (48%), Gaps = 2/189 (1%)

Query: 188 KPTVVTY--NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           +P++V    + LF    +    + +L++F+  ++     D  +   F+  L ++G +   
Sbjct: 113 EPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELC 172

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           VE  R +     E+ + ++  ++DGLCK G +  A  L   L  +     V+TYN +++G
Sbjct: 173 VEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNG 232

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
                 +   +++   ME+N V  NV  +  LI  + R +K  +  +L  +M +K + PD
Sbjct: 233 YIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPD 292

Query: 366 ASIVSMVVD 374
             I + +++
Sbjct: 293 VYIYTSIIN 301


>gi|255661030|gb|ACU25684.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 376

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 188/352 (53%), Gaps = 9/352 (2%)

Query: 27  CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           C+ G +D A+ ++ +M    ++PD V YN++++G   A    +   L+ E+M +    +V
Sbjct: 1   CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELW-ELMGREXSQNV 59

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
           V+FN++M  L  NG +D+A  + +LM Q     ++ TY  L+DGFC  G IN++  +   
Sbjct: 60  VSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEI 119

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
            E  G   D  +Y+ +ING CK  +++EA+S+   M+  G  P    YNTL  G   + +
Sbjct: 120 AEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSK 179

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQA 263
            + A+++F EM   + +    TYNT I+GLCK     EA +L + +   G   C   +  
Sbjct: 180 FDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPC---VIT 236

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
           Y+ L+ GLC+  ++E+AL+L+  +    L  DV   NI+IHGLC+ G+   A  L+ DM 
Sbjct: 237 YSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMN 296

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
               APN++   TL+ GF +       + +  ++    + PD  IVS  + L
Sbjct: 297 RWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPD--IVSYNITL 346



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 168/318 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V++N ++ GL   G VDKA +++  M       D  TY  L+ G C     N++ R+ 
Sbjct: 58  NVVSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVL 117

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
               ++G       ++ +++ LCK  K+DEA  +L+ M++    PNA  Y+TL++GF   
Sbjct: 118 EIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGV 177

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            K + A  +F  M S  C    V+YN LING CK +   EA  L +EM+ KG KP V+TY
Sbjct: 178 SKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITY 237

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + L  GL + H+VE AL+L+ ++  + +  D    N  I GLC  G    A+ L+  +  
Sbjct: 238 SLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNR 297

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C  ++  +N L++G  K G +  AL ++  + R  L  D+V+YNI + GLC+  ++  
Sbjct: 298 WNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISF 357

Query: 315 AHDLFLDMEENAVAPNVI 332
           A     D     +AP++I
Sbjct: 358 AILFLQDALAKKIAPSII 375



 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 180/353 (50%), Gaps = 1/353 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+ V YN +++G  + G +     L+ ++ G   + +VV++N ++ GL    D ++A  
Sbjct: 22  SPDAVVYNAMLNGFFRAGRIKDCIELW-ELMGREXSQNVVSFNIMMRGLFGNGDVDKAIS 80

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++  M   G      T+ +++D  CKNG ++++ R+L++  ++    +AF YS +++G C
Sbjct: 81  IWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIAEEKGGVLDAFAYSAMINGLC 140

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K++ A  +   M   G   +   YN LING+    + ++A+ ++REM S    PTVV
Sbjct: 141 KEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVFREMGSTNCSPTVV 200

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GL +  +   A  L +EM          TY+  + GLC+   +  A++L+  +
Sbjct: 201 TYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQV 260

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D+Q  N LI GLC  G+ ++AL L+  + R     ++VT+N ++ G   DG +
Sbjct: 261 ISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDI 320

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             A  ++  +  N + P+++ +   + G    ++ S  I  L     KK+ P 
Sbjct: 321 RNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIAPS 373



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 147/284 (51%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           ++ TY  ++DG CK G+++K+  +    + +    D   Y+++I+GLC     +EA  + 
Sbjct: 93  DSTTYGILVDGFCKNGYINKSLRVLEIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVL 152

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M+  G  P+   +N +++      K D+A R+   M   +  P   TY+TL++G C  
Sbjct: 153 NGMIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKG 212

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            +   A +L   M   G K   ++Y++L+ G C+  +VE AL L+ +++S G+KP V   
Sbjct: 213 ERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQML 272

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L  GL  + + + AL L+ +M R + A +  T+NT ++G  K+G I  A+ ++  +  
Sbjct: 273 NILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILR 332

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
              + DI +YN  + GLC   R+  A+   +    + +   ++T
Sbjct: 333 NGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIAPSIIT 376



 Score =  130 bits (328), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 120/224 (53%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           NG I     PN   YNT+I+G       D A  +F +M   N +P VVTYN+LI+GLC  
Sbjct: 153 NGMIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKG 212

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
             + EA  L  EM+++G +P V+T++++M  LC+  K++ A +L + ++   ++P+    
Sbjct: 213 ERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQML 272

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + L+ G C  GK   A  L+  M    C  + V++N L+ G+ K+ ++  AL ++  ++ 
Sbjct: 273 NILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILR 332

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
            G++P +V+YN    GL    ++  A+   ++     +A    T
Sbjct: 333 NGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIAPSIIT 376


>gi|255586858|ref|XP_002534039.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223525946|gb|EEF28343.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 189/353 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PNT +++ +I+GL +   +D A  LF  M     N D++ YN+LI+GLC+++   E+ +
Sbjct: 228 RPNTASFSIVINGLMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLINGLCNSDRLEESYK 287

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM + G +P+  T N I   LCK   +  A  L+  M      P    Y+ L+   C
Sbjct: 288 LLKEMEESGFKPTQFTLNSIFGCLCKRQDVSGALDLVKKMRLYGCEPWVKHYTLLVRKLC 347

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK   A      M   G   + ++Y+ L+ G  + +EV++AL L++++ ++G  P V+
Sbjct: 348 KHGKAAEASIFLTDMVQEGFPPNIIAYSALLGGLIEVQEVDQALKLFKDISARGRCPDVI 407

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN L  GL+E H+ E A  LF EM    +     TYN  IDG CKNG I +A+    ++
Sbjct: 408 AYNILMKGLYEAHRTEEARNLFNEMVMKGLIPSVVTYNLLIDGWCKNGCIDDAMNCLCSM 467

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + E ++  Y  LIDGLCK+GR + A+ L+  + RR    + V +   IHGLC   + 
Sbjct: 468 SAKEREPNVFTYTTLIDGLCKAGRPDDAVMLWNEMRRRGCRPNRVAFMGFIHGLCKCDKP 527

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + A   F +MEE  + P+  ++++L+  FV I+      E+L KM +++  PD
Sbjct: 528 EAALIHFHEMEEEEMEPDTYVYISLVSAFVNISNFPMAFEILKKMVDRRNFPD 580



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 187/379 (49%), Gaps = 18/379 (4%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKG--------------ENINPDVVTYNSLIHG 60
            T+  N+++  L   G +DKA  L   M G              E I P+  +++ +I+G
Sbjct: 181 QTLLCNSVLSSLVNSGLIDKACCLLRNMMGNGDDDDVQYKLFRDEKIRPNTASFSIVING 240

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           L  A   + A  LF +M + G    ++ +N +++ LC + +++E+ +LL  M +   +P 
Sbjct: 241 LMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLINGLCNSDRLEESYKLLKEMEESGFKPT 300

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
            FT +++    C    ++ A +L   M   GC+     Y +L+   CK+ +  EA     
Sbjct: 301 QFTLNSIFGCLCKRQDVSGALDLVKKMRLYGCEPWVKHYTLLVRKLCKHGKAAEASIFLT 360

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           +MV +G  P ++ Y+ L  GL E+ +V+ ALKLF+++       D   YN  + GL +  
Sbjct: 361 DMVQEGFPPNIIAYSALLGGLIEVQEVDQALKLFKDISARGRCPDVIAYNILMKGLYEAH 420

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
              EA  LF  + +      +  YN LIDG CK+G ++ A+    S+  +    +V TY 
Sbjct: 421 RTEEARNLFNEMVMKGLIPSVVTYNLLIDGWCKNGCIDDAMNCLCSMSAKEREPNVFTYT 480

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +I GLC  G+ D A  L+ +M      PN + F+  IHG  + +KP   +   H+M+E+
Sbjct: 481 TLIDGLCKAGRPDDAVMLWNEMRRRGCRPNRVAFMGFIHGLCKCDKPEAALIHFHEMEEE 540

Query: 361 KVMPDA----SIVSMVVDL 375
           ++ PD     S+VS  V++
Sbjct: 541 EMEPDTYVYISLVSAFVNI 559



 Score =  160 bits (406), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 185/433 (42%), Gaps = 82/433 (18%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T+  +I G  K+  VDK   LF +M+   ++PD+  Y+ LI G C     ++A  L+
Sbjct: 78  NEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLYDVLIGGFCSNKKLDKALSLY 137

Query: 75  FEMMDQGVQPSV---------------------------------VTFNVIMDELCKNGK 101
            EM    +QP +                                 +  N ++  L  +G 
Sbjct: 138 AEMKMLKIQPDIGVVSKLISSFPEEGKLIDILEETLEDMNIETQTLLCNSVLSSLVNSGL 197

Query: 102 MDEASRLLDLMVQ------------RD--VRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
           +D+A  LL  M+             RD  +RPN  ++S +++G     K++ A  LF  M
Sbjct: 198 IDKACCLLRNMMGNGDDDDVQYKLFRDEKIRPNTASFSIVINGLMQACKLDLAVCLFQDM 257

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
             +GC  D + YN LING C +  +EE+  L +EM   G KPT  T N++F  L +   V
Sbjct: 258 AEIGCNRDLLLYNNLINGLCNSDRLEESYKLLKEMEESGFKPTQFTLNSIFGCLCKRQDV 317

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE----------------------- 244
             AL L ++M+          Y   +  LCK+G   E                       
Sbjct: 318 SGALDLVKKMRLYGCEPWVKHYTLLVRKLCKHGKAAEASIFLTDMVQEGFPPNIIAYSAL 377

Query: 245 ------------AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
                       A++LF+ +       D+ AYN L+ GL ++ R E A  LF  +  + L
Sbjct: 378 LGGLIEVQEVDQALKLFKDISARGRCPDVIAYNILMKGLYEAHRTEEARNLFNEMVMKGL 437

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
           +  VVTYN++I G C +G +D A +    M      PNV  + TLI G  +  +P   + 
Sbjct: 438 IPSVVTYNLLIDGWCKNGCIDDAMNCLCSMSAKEREPNVFTYTTLIDGLCKAGRPDDAVM 497

Query: 353 LLHKMKEKKVMPD 365
           L ++M+ +   P+
Sbjct: 498 LWNEMRRRGCRPN 510



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/407 (22%), Positives = 178/407 (43%), Gaps = 47/407 (11%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +   ++ ++    K G VDK+     +M+ +N   +  T+ +LIHG    +  ++  +LF
Sbjct: 43  DAYVFSILVLSFSKWGQVDKSFEFIEKMEEQNFRLNEKTFCNLIHGFVKQSRVDKGVQLF 102

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
           ++M   G+ P +  ++V++   C N K+D+A  L   M    ++P+    S L+  F   
Sbjct: 103 YKMQKYGLSPDISLYDVLIGGFCSNKKLDKALSLYAEMKMLKIQPDIGVVSKLISSFPEE 162

Query: 135 GK-INRAEELFGSM------------------------------ESMGCKHDD------- 156
           GK I+  EE    M                                MG   DD       
Sbjct: 163 GKLIDILEETLEDMNIETQTLLCNSVLSSLVNSGLIDKACCLLRNMMGNGDDDDVQYKLF 222

Query: 157 ---------VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
                     S++I+ING  +  +++ A+ L+++M   G    ++ YN L  GL    ++
Sbjct: 223 RDEKIRPNTASFSIVINGLMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLINGLCNSDRL 282

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
           E + KL +EM+         T N+    LCK   +  A++L + + +  CE  ++ Y  L
Sbjct: 283 EESYKLLKEMEESGFKPTQFTLNSIFGCLCKRQDVSGALDLVKKMRLYGCEPWVKHYTLL 342

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           +  LCK G+   A      + +     +++ Y+ ++ GL    ++D+A  LF D+     
Sbjct: 343 VRKLCKHGKAAEASIFLTDMVQEGFPPNIIAYSALLGGLIEVQEVDQALKLFKDISARGR 402

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            P+VI +  L+ G    ++  +   L ++M  K ++P     ++++D
Sbjct: 403 CPDVIAYNILMKGLYEAHRTEEARNLFNEMVMKGLIPSVVTYNLLID 449



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 148/333 (44%), Gaps = 37/333 (11%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
            EIG  C  + + YN +I+GLC    ++++  L  +M+     P   T NS+   LC   
Sbjct: 258 AEIG--CNRDLLLYNNLINGLCNSDRLEESYKLLKEMEESGFKPTQFTLNSIFGCLCKRQ 315

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
           D + A  L  +M   G +P V  + +++ +LCK+GK  EAS  L  MVQ    PN   YS
Sbjct: 316 DVSGALDLVKKMRLYGCEPWVKHYTLLVRKLCKHGKAAEASIFLTDMVQEGFPPNIIAYS 375

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNIL----------------------- 162
            L+ G     ++++A +LF  + + G   D ++YNIL                       
Sbjct: 376 ALLGGLIEVQEVDQALKLFKDISARGRCPDVIAYNILMKGLYEAHRTEEARNLFNEMVMK 435

Query: 163 ------------INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
                       I+G+CKN  +++A++    M +K  +P V TY TL  GL +  + + A
Sbjct: 436 GLIPSVVTYNLLIDGWCKNGCIDDAMNCLCSMSAKEREPNVFTYTTLIDGLCKAGRPDDA 495

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           + L+ EM+R     +   +  FI GLCK      A+  F  +   + E D   Y  L+  
Sbjct: 496 VMLWNEMRRRGCRPNRVAFMGFIHGLCKCDKPEAALIHFHEMEEEEMEPDTYVYISLVSA 555

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
                   +A E+ + +  R    D +  N +I
Sbjct: 556 FVNISNFPMAFEILKKMVDRRNFPDPLDKNCII 588



 Score =  121 bits (304), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 170/332 (51%), Gaps = 19/332 (5%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           M+ + ++    T   ++   C+A  ++EA  +F E+ D G   + V F++++    K G+
Sbjct: 1   MRDQGLSFSKYTLTPVLQVYCNAGKFDEALNVFNEIQDHGWLDAYV-FSILVLSFSKWGQ 59

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D++   ++ M +++ R N  T+  L+ GF    ++++  +LF  M+  G   D   Y++
Sbjct: 60  VDKSFEFIEKMEEQNFRLNEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLYDV 119

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD- 220
           LI G+C NK++++ALSLY EM    I+P +   + L     E  ++   + + EE   D 
Sbjct: 120 LIGGFCSNKKLDKALSLYAEMKMLKIQPDIGVVSKLISSFPEEGKL---IDILEETLEDM 176

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ--------------AYNC 266
           ++   T   N+ +  L  +G I +A  L R +     + D+Q              +++ 
Sbjct: 177 NIETQTLLCNSVLSSLVNSGLIDKACCLLRNMMGNGDDDDVQYKLFRDEKIRPNTASFSI 236

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           +I+GL ++ +L++A+ LF+ +       D++ YN +I+GLCN  ++++++ L  +MEE+ 
Sbjct: 237 VINGLMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLINGLCNSDRLEESYKLLKEMEESG 296

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
             P      ++     +    S  ++L+ KM+
Sbjct: 297 FKPTQFTLNSIFGCLCKRQDVSGALDLVKKMR 328



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 88/186 (47%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + YN ++ GL +    ++A+ LF +M  + + P VVTYN LI G C     ++A   
Sbjct: 404 PDVIAYNILMKGLYEAHRTEEARNLFNEMVMKGLIPSVVTYNLLIDGWCKNGCIDDAMNC 463

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +  +P+V T+  ++D LCK G+ D+A  L + M +R  RPN   +   + G C 
Sbjct: 464 LCSMSAKEREPNVFTYTTLIDGLCKAGRPDDAVMLWNEMRRRGCRPNRVAFMGFIHGLCK 523

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K   A   F  ME    + D   Y  L++ +        A  + ++MV +   P  + 
Sbjct: 524 CDKPEAALIHFHEMEEEEMEPDTYVYISLVSAFVNISNFPMAFEILKKMVDRRNFPDPLD 583

Query: 194 YNTLFL 199
            N + +
Sbjct: 584 KNCIII 589



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 1/157 (0%)

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M+   ++    T    +   C  G   EA+ +F  +      LD   ++ L+    K G+
Sbjct: 1   MRDQGLSFSKYTLTPVLQVYCNAGKFDEALNVFNEIQD-HGWLDAYVFSILVLSFSKWGQ 59

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           ++ + E    +  +    +  T+  +IHG     ++DK   LF  M++  ++P++ ++  
Sbjct: 60  VDKSFEFIEKMEEQNFRLNEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLYDV 119

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           LI GF    K  K + L  +MK  K+ PD  +VS ++
Sbjct: 120 LIGGFCSNKKLDKALSLYAEMKMLKIQPDIGVVSKLI 156


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 196/365 (53%), Gaps = 1/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V++N+I+  L K+  VD+A +LF  MK ++  P+  TYN +I  LC      EA 
Sbjct: 216 CIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAY 274

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R+  EM    + P+++T N+++D LCK  K++EA ++ +   QR   P+  TY +L+DG 
Sbjct: 275 RILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGL 334

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+++ A  LF  M   G   + V Y  LI  +  +   E+   +++E++ +G KP +
Sbjct: 335 GKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDL 394

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
              NT    +F+  +VE    +FE+++      D  +Y+  I GL K G   E   +F  
Sbjct: 395 TLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHA 454

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +      LD +AYN ++DG CKSG++  A E+   +  + +   V TY  ++ GL    +
Sbjct: 455 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 514

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A+ LF + +   +  NV+++ +LI GF ++ +  +   +L +M +K + P+    + 
Sbjct: 515 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 574

Query: 372 VVDLL 376
           ++D L
Sbjct: 575 LLDAL 579



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 191/365 (52%), Gaps = 4/365 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVTYNSLIHGLCHANDWNE 69
           C P+ VTY ++IDGL K+G VD+A  LF +M   G N NP  V Y SLI          +
Sbjct: 320 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP--VVYTSLIRNFFIHGRKED 377

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
             ++F E++ +G +P +   N  MD + K G++++   + + +      P+  +YS L+ 
Sbjct: 378 GHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIH 437

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G    G+      +F +M+  G   D  +YN +++G+CK+ +V +A  +  EM  K ++P
Sbjct: 438 GLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQP 497

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           TV TY  +  GL +I +++ A  LFEE +   +  +   Y++ IDG  K G I EA  + 
Sbjct: 498 TVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLIL 557

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +       ++  +N L+D L K+  +  AL  F+S+       +  TY+I+I+GLC  
Sbjct: 558 EEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRV 617

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            + +KA   + DM++  + PNV+ + T+I G  ++   +    L  + K    +PDA+  
Sbjct: 618 QKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASF 677

Query: 370 SMVVD 374
           + +++
Sbjct: 678 NALIE 682



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 196/403 (48%), Gaps = 36/403 (8%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G   +P+ V YN  ID   K G VD A   F ++K + + PD V+Y S+I  LC A    
Sbjct: 108 GSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLG 167

Query: 69  EAKRLFFEM-----------------------------------MDQGVQPSVVTFNVIM 93
           EA+ LF +M                                    ++G  PSVV+FN I+
Sbjct: 168 EAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSIL 227

Query: 94  DELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCK 153
             L K  K+DEA  L ++M ++D  PN+ TY+ ++D  CL G++  A  +   ME     
Sbjct: 228 TCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLF 286

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            + ++ NI+++  CK +++EEA  ++     +G  P  VTY +L  GL +  QV+ A +L
Sbjct: 287 PNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRL 346

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
           FE+M      A+   Y + I     +G   +  ++F+ L    C+ D+   N  +D + K
Sbjct: 347 FEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFK 406

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           +G +E    +F  +     + DV +Y+I+IHGL   GQ  +  ++F  M++   A +   
Sbjct: 407 AGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARA 466

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +  ++ GF +  K  K  E+L +MKEK V P  +    +VD L
Sbjct: 467 YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 509



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 187/364 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN+ TYN IID LC  G V++A  +  +M+  ++ P+++T N ++  LC A    EA +
Sbjct: 251 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYK 310

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F     +G  P  VT+  ++D L K G++DEA RL + M+      N   Y++L+  F 
Sbjct: 311 IFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFF 370

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + G+     ++F  +   GCK D    N  ++   K  EVE+   ++ ++ S G  P V 
Sbjct: 371 IHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVR 430

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y+ L  GL +  Q      +F  M++   A D   YN  +DG CK+G + +A E+   +
Sbjct: 431 SYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM 490

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +  +  Y  ++DGL K  RL+ A  LF     + +  +VV Y+ +I G    G++
Sbjct: 491 KEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRI 550

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A+ +  +M +  + PNV  + +L+   V+  + ++ +     MKE K  P+    S++
Sbjct: 551 DEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSIL 610

Query: 373 VDLL 376
           ++ L
Sbjct: 611 INGL 614



 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 35/335 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+    NT +D + K G V+K + +F  ++     PDV +Y+ LIHGL  A    E  
Sbjct: 390 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETS 449

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M  QG       +N ++D  CK+GK+ +A  +L+ M ++ V+P   TY  ++DG 
Sbjct: 450 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 509

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +++ A  LF   +S G + + V Y+ LI+G+ K   ++EA  +  EM+ KG+ P V
Sbjct: 510 AKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 569

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+N+L   L +  ++  AL  F+ M+      +T TY+  I+GLC+             
Sbjct: 570 YTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCR------------- 616

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                    +Q YN              A   ++ + ++ LV +VVTY  MI GL   G 
Sbjct: 617 ---------VQKYN-------------KAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGN 654

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +  A+ LF   + N   P+   F  LI G    N+
Sbjct: 655 ITDAYSLFERFKANGGIPDAASFNALIEGMSNANR 689



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 179/362 (49%), Gaps = 1/362 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P    Y  +I  L +    ++A  L  QM+       V  + +L+  L       +A  
Sbjct: 42  RPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALA 101

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  E+    ++P +V +NV +D   K G +D A +    +  + ++P+  +Y++++   C
Sbjct: 102 LVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLC 161

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  AEELF  ME+        +YN +I GY      E+A  L   +  +G  P+VV
Sbjct: 162 KAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVV 221

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           ++N++   L +  +V+ AL LFE M++ D   ++STYN  ID LC  G + EA  +   +
Sbjct: 222 SFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEM 280

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++   N ++D LCK+ +LE A ++F S  +R    D VTY  +I GL   GQ+
Sbjct: 281 EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQV 340

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A+ LF  M +     N +++ +LI  F    +     ++  ++  +   PD ++++  
Sbjct: 341 DEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTY 400

Query: 373 VD 374
           +D
Sbjct: 401 MD 402



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 134/230 (58%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
            YN ++DG CK G V KA  +  +MK + + P V TY +++ GL   +  +EA  LF E 
Sbjct: 466 AYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEA 525

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
             +G++ +VV ++ ++D   K G++DEA  +L+ M+++ + PN +T+++L+D      +I
Sbjct: 526 KSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEI 585

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           N A   F SM+ M C  +  +Y+ILING C+ ++  +A   +++M  +G+ P VVTY T+
Sbjct: 586 NEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTM 645

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
             GL ++  +  A  LFE  + +    D +++N  I+G+      +EA +
Sbjct: 646 ISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 695



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 133/285 (46%), Gaps = 9/285 (3%)

Query: 96  LCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHD 155
           L +  ++D+A   + +M +   RP    Y+ L+       +  RA EL   M+ +G +  
Sbjct: 20  LVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVG 79

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
              +  L+    +  +V +AL+L  E+    ++P +V YN       +   V+ A K F 
Sbjct: 80  VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFH 139

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
           E++   +  D  +Y + I  LCK G + EA ELF  +   +      AYN +I G   +G
Sbjct: 140 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 199

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF----LDMEENAVAPNV 331
           R E A +L   L  R  +  VV++N ++  L    ++D+A  LF     D E N+   N+
Sbjct: 200 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNI 259

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           II +  + G V      +   +L +M+   + P+   V+++VD L
Sbjct: 260 IIDMLCLGGRV-----EEAYRILDEMEHASLFPNLLTVNIMVDRL 299



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 74/170 (43%)

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L   L    +++ A+     M+R       S Y   I  L +      A+EL R +  + 
Sbjct: 16  LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 75

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            E+ +  +  L+  L + G++  AL L   +    L  D+V YN+ I      G +D A 
Sbjct: 76  YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAC 135

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             F +++   + P+ + + ++I    +  +  +  EL  +M+ ++ +P A
Sbjct: 136 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCA 185


>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
          Length = 526

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 191/389 (49%), Gaps = 25/389 (6%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PN VTYN+II  LCK   VDKA  +   M    + PD +TYNS++HG C +    EA  
Sbjct: 113 SPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIV 172

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +M   GV+P VVT+N +MD LCKNG+  EA ++ D M +R ++P+  TY TL+ G+ 
Sbjct: 173 FLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYA 232

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +     L   M   G   +   ++IL+  Y K ++VEEA+ ++ +M  +G+ P  V
Sbjct: 233 TKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAV 292

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY T+   L +  +VE A+  FE+M  + +  D+  YN+ I  LC      +A ELF  +
Sbjct: 293 TYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEM 352

Query: 253 GILKCELDIQAYNCLIDGLCKSGRL-------------------------EIALELFRSL 287
                 L    +N +ID  CK GR+                         + A +LF + 
Sbjct: 353 LDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRNDEAKDLFVAF 412

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
               LV +  TY +M   +   G +++   LFL ME+N    +  +   ++   ++  + 
Sbjct: 413 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEI 472

Query: 348 SKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           ++    L  + EK    +AS  S+ +DLL
Sbjct: 473 TRAGTYLSMIDEKHFSLEASTASLFIDLL 501



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 179/354 (50%), Gaps = 9/354 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMK--GENINPDVVTYNSLIHGLCHANDWNEAK 71
           P+  +YN +++GLC E    +A  L   M   G +  PDVV+Y+++I+G     D +   
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLD--- 105

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
               +M+DQ + P+VVT+N I+  LCK   +D+A  +L  MV+  V P+  TY++++ GF
Sbjct: 106 ----KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 161

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +G+   A      M S G + D V+YN L++  CKN    EA  ++  M  +G+KP +
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDI 221

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY TL  G      +     L + M R+ +  +   ++  +    K   + EA+ +F  
Sbjct: 222 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 281

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       +   Y  +ID LCKSGR+E A+  F  +    L  D + YN +IH LC   +
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +KA +LFL+M +  +  + I F ++I    +  +  +  +L   M    V PD
Sbjct: 342 WEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPD 395



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 145/276 (52%), Gaps = 10/276 (3%)

Query: 103 DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG--CKHDDVSYN 160
           ++A  + D +++R + P+ F+Y+ L++G C   +   A EL   M   G  C  D VSY+
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            +ING+ K  ++++       M+ + I P VVTYN++   L +   V+ A+++   M + 
Sbjct: 93  TVINGFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            V  D  TYN+ + G C +G   EA+   + +     E D+  YN L+D LCK+GR   A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            ++F S+ +R L  D+ TY  ++ G    G + + H L   M  N + PN  +F  L+  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + +  K  + + +  KM+++ + P+A     V+D+L
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVL 301



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 113/228 (49%), Gaps = 10/228 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY T+ID LCK G V+ A   F QM  E + PD + YNSLIH LC  + W +A+ L
Sbjct: 289 PNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEEL 348

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+D+G+  S + FN I+D  CK G++ E+ +L DLMV+  V+P+  T          
Sbjct: 349 FLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT---------- 398

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+ + A++LF +  S G   +  +Y ++         +EE   L+  M   G       
Sbjct: 399 LGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGM 458

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
            N +   L +  ++  A      +     + + ST + FID L    Y
Sbjct: 459 LNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 506


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 190/386 (49%), Gaps = 42/386 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNTVTYNT+IDG CK G +++A     +MK +N+  ++VTYNSL++GLC +   ++A+ +
Sbjct: 225 PNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREV 284

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G  P      V  D    NG  D+      L   +++R +  TY  L++G C 
Sbjct: 285 LLEMEGSGFLPGGFLSFVFDDH--SNGAGDDG-----LFDGKEIRIDERTYCILLNGLCR 337

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+I +AEE+   +   G     +SYNIL+N YC+  +V++A+    +M  +G++P  +T
Sbjct: 338 VGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRIT 397

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           +NT+     E  +V+HA      M    V+    TYN+ I+G  + G+ V   E    + 
Sbjct: 398 FNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMD 457

Query: 253 ------------GILKC----------------------ELDIQAYNCLIDGLCKSGRLE 278
                        ++ C                        + + YN LI+  C   +L+
Sbjct: 458 KAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLK 517

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A   F  + +  + A +VTYN +I+GL  +G++ KA DLFL M      P+VI + +LI
Sbjct: 518 DAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLI 577

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMP 364
            G+ +     K +EL  KMK   + P
Sbjct: 578 SGYAKSVNTQKCLELYDKMKILGIKP 603



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 203/410 (49%), Gaps = 38/410 (9%)

Query: 2   ANGNGEIGVV----CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSL 57
           +NG G+ G+      + +  TY  +++GLC+ G ++KA+ +  ++    + P  ++YN L
Sbjct: 307 SNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNIL 366

Query: 58  IHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV 117
           ++  C   D  +A     +M ++G++P+ +TFN ++ + C+ G++D A   +  MV++ V
Sbjct: 367 VNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGV 426

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
            P   TY++L++G+   G   R  E    M+  G K + +SY  LIN  CK++++ +A  
Sbjct: 427 SPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEI 486

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           +  +M+ +G+ P    YN L      + +++ A + F+EM +  + A   TYNT I+GL 
Sbjct: 487 VLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLG 546

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL-------------- 283
           +NG + +A +LF  +    C  D+  YN LI G  KS   +  LEL              
Sbjct: 547 RNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVG 606

Query: 284 --------------------FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
                               F+ + +  LV D   YN MI+    DG + KA  L   M 
Sbjct: 607 TFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMV 666

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +  V  + + + +LI  ++R  + S++  L+  MK K ++P     ++++
Sbjct: 667 DQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILI 716



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 182/357 (50%), Gaps = 17/357 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TYN++I+G  ++G   +      +M    I P+V++Y SLI+ LC      +A+ +
Sbjct: 428 PTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIV 487

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+ +GV P+   +N++++  C   K+ +A R  D M+Q  +     TY+TL++G   
Sbjct: 488 LADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGR 547

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++ +AE+LF  M   GC  D ++YN LI+GY K+   ++ L LY +M   GIKPTV T
Sbjct: 548 NGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGT 607

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           ++ L     +   V    K+F+EM + D+  D   YN  I    ++G +++A+ L + + 
Sbjct: 608 FHPLIYACRK-EGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMV 666

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D   YN LI    +  R+     L   +  + LV  V TYNI+I GLC+    +
Sbjct: 667 DQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFN 726

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            A+  + +M E  +  NV +   LI G                ++E+ ++ +A IVS
Sbjct: 727 GAYFWYREMVERGLLLNVSMCYQLISG----------------LREEGMLREAQIVS 767



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 181/364 (49%), Gaps = 1/364 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +T+NT+I   C+ G VD A+    +M  + ++P V TYNSLI+G      +     
Sbjct: 392 EPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFE 451

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              EM   G++P+V+++  +++ LCK+ K+ +A  +L  M+ R V PNA  Y+ L++  C
Sbjct: 452 FLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASC 511

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K+  A   F  M   G     V+YN LING  +N  V++A  L+ +M  KG  P V+
Sbjct: 512 SLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVI 571

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN+L  G  +    +  L+L+++M+   +     T++  I   C+   +V   ++F+ +
Sbjct: 572 TYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEM 630

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +    D   YN +I    + G +  A+ L + +  + +  D VTYN +I     D ++
Sbjct: 631 LQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRV 690

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +   L  DM+   + P V  +  LI G   +   +       +M E+ ++ + S+   +
Sbjct: 691 SEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQL 750

Query: 373 VDLL 376
           +  L
Sbjct: 751 ISGL 754



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 170/357 (47%), Gaps = 17/357 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T + N ++  L      +K  A+F  +      PD V Y   +       D ++   L
Sbjct: 120 PSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFEL 179

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+  G+ PSV  +N+++  LCK  ++ +A +L D M+QR++ PN  TY+TL+DG+C 
Sbjct: 180 MKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCK 239

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G I  A      M+    + + V+YN L+NG C +  V++A  +  EM   G  P    
Sbjct: 240 VGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPG--- 296

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRD--DVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
                 G       +H+    ++   D  ++  D  TY   ++GLC+ G I +A E+   
Sbjct: 297 ------GFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAK 350

Query: 252 L---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           L   G+   ++   +YN L++  C+ G ++ A+     +  R L  + +T+N +I   C 
Sbjct: 351 LVENGVTPSKI---SYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCE 407

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            G++D A      M E  V+P V  + +LI+G+ +     +  E L +M +  + P+
Sbjct: 408 TGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPN 464



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 148/307 (48%), Gaps = 29/307 (9%)

Query: 96  LCKNGKM-DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
           LC   KM DEA+ L   M +    P+  + + L+     +    +   +F  +   G + 
Sbjct: 96  LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRP 155

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D V+Y   +      K++++   L + MV  G+ P+V  YN +  GL ++ +++ A KLF
Sbjct: 156 DAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLF 215

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           +EM + ++  +T TYNT IDG CK G I EA+     +     E ++  YN L++GLC S
Sbjct: 216 DEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGS 275

Query: 275 GRL----EIALELFRS--LPRRVLV----------------------ADVVTYNIMIHGL 306
           GR+    E+ LE+  S  LP   L                        D  TY I+++GL
Sbjct: 276 GRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGL 335

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C  G+++KA ++   + EN V P+ I +  L++ + +     K I    +M+E+ + P+ 
Sbjct: 336 CRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNR 395

Query: 367 SIVSMVV 373
              + V+
Sbjct: 396 ITFNTVI 402


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 195/398 (48%), Gaps = 41/398 (10%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           Y T+I+G CK G VD+A  L  +MK   +  DV+ +++LI GLC     +EA    F+ M
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQ-FKSM 60

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR-----DVRPNAFTYSTLMDGFCL 133
            +   P+V+T+N +++ LCK  ++DE   L D M +R        P+  +YST++D  C 
Sbjct: 61  GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++++A E F  M ++GC  + V+Y+ LI+G CK   V+EA SL  ++  + + P  + 
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  G     +    L+L   M+      +   +N  +  L KN    +A + F  L 
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + ++  YN  + GLCK+G+++ A  +   +    +  DV+TY+ +I G C  G+MD
Sbjct: 241 KSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMD 300

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK------------------------ 349
           KA D+F  M  +   P+ + F+TL+HGF    K  +                        
Sbjct: 301 KADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLM 360

Query: 350 -----------VIELLHKMKEKKVMPDASIVSMVVDLL 376
                       +E+ HKMK KK  PDA+  + ++  L
Sbjct: 361 DCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCL 398



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 190/374 (50%), Gaps = 5/374 (1%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMK-----GENINPDVVTYNSLIHGLC 62
           +G  C PN +TYNT+++GLCK   +D+   LF  M+          PDV++Y+++I  LC
Sbjct: 60  MGEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
            A   ++A   F  M   G  P+VVT++ ++D LCK  ++DEA  LL  +   D+ P A 
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAM 179

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
            Y+ +++GF   GK +   EL   M+  G   + + +N +++   KN E E+A   +  +
Sbjct: 180 YYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 239

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
           +  G KP VVTYN    GL +  +V+ A ++  EM    V  D  TY++ IDG CK G +
Sbjct: 240 LKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 299

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            +A ++F  + + +C      +  L+ G  +  +   A  +   +     +  + TYN++
Sbjct: 300 DKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVL 359

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           +  +C    ++ A +++  M+     P+   +  LI    R  +  +  E L  M+   V
Sbjct: 360 MDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNV 419

Query: 363 MPDASIVSMVVDLL 376
           +P+ +I   +V++L
Sbjct: 420 VPNGAICHALVEVL 433



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 202/422 (47%), Gaps = 54/422 (12%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG-------- 60
            V C PN VTY+++IDGLCK   VD+A +L +Q+KGE++ P  + YN++++G        
Sbjct: 136 AVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPS 195

Query: 61  -----------------------LCHA---NDWNEAKRLFFE-MMDQGVQPSVVTFNVIM 93
                                  + HA   ND  E    FFE ++  G +P+VVT+NV +
Sbjct: 196 ECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAV 255

Query: 94  DELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCK 153
             LCK GK+DEA R+L  MV+  V P+  TYS+++DGFC  G++++A+++F  M    C 
Sbjct: 256 HGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECI 315

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
              V++  L++G+ ++K+  EA  ++ +MV+ G  P + TYN L   +     VE AL++
Sbjct: 316 PHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEI 375

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG----------------ILKC 257
           + +M+R     D +TY   I  LC+   + EA E    +                 +L  
Sbjct: 376 YHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCK 435

Query: 258 ELDIQAYNCLIDG---LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           + ++     ++D    +CK+G  + A+E+   +  + +  D  TY  ++  LC   ++D 
Sbjct: 436 QGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDS 495

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A   F  M     AP ++ +  LI      +       +   M      P A  +  +  
Sbjct: 496 AIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSS 555

Query: 375 LL 376
            L
Sbjct: 556 CL 557



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 117/282 (41%), Gaps = 54/282 (19%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TY++IIDG CK G +DKA  +F +M      P  VT+ +L+HG        EA R+
Sbjct: 281 PDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRV 340

Query: 74  FFEMMDQGVQPSVVTFNVIMDE-----------------------------------LCK 98
             +M++ G  P + T+NV+MD                                    LC+
Sbjct: 341 HEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCR 400

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA----------------EE 142
             ++DEA   LD+M   +V PN      L++  C  G+++ A                +E
Sbjct: 401 ARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDE 460

Query: 143 LFGSMESM---GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
               +E M   G + D+ +Y  ++   C    V+ A++ + +M S+G  P +VTY  L  
Sbjct: 461 AVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIG 520

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
                   + A ++FE M          T  T    L   GY
Sbjct: 521 EACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGY 562



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 41/91 (45%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TY  ++  LC    VD A A F +M      P +VTY  LI   C A+  ++A R
Sbjct: 474 RPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFR 533

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMD 103
           +F  M+  G  P   T   +   L   G  D
Sbjct: 534 IFEAMVAAGFTPQAQTMRTLSSCLRDAGYQD 564


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 181/363 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V Y T+I GLC+ G   +A+ L+ +M  + + P+  TYN+++HG   + D+  A  L
Sbjct: 331 PDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACEL 390

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + EM ++G   + VT N I+ ELC  GK DEA  +   M +  ++ +A TY++L+ GFC 
Sbjct: 391 YNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCK 450

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++    L   + +   +     Y +LI   CK+ + E A  L  +M SKG+ P   T
Sbjct: 451 EGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYT 510

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+T+  G  +    EH  +L+ E         T+T N  I  LC  G   EA E+F+ + 
Sbjct: 511 YDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMS 570

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D   YN LI G CK G++  ++ L   L  + L     +Y  +I  LC +G  +
Sbjct: 571 ETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAE 630

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L+ DM    + P+  +   LI G  +  + ++ ++ L  M E K+ P  +    + 
Sbjct: 631 SAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLA 690

Query: 374 DLL 376
           + L
Sbjct: 691 ECL 693



 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 179/363 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TY  II+GLCK     +A  +F  +K     PD V Y ++IHGLC    + EA++L
Sbjct: 296 PTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKL 355

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           +FEMMD+G+QP+  T+N ++    K+G  + A  L + M  +       T + ++   C 
Sbjct: 356 WFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCS 415

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK + A E+F  M   G + D ++YN LI G+CK  +V+E ++L  E+V++  +P+V  
Sbjct: 416 RGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSL 475

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L +   +    E A +L  +M    +  +  TY+T + G  K+G      EL+    
Sbjct: 476 YELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETC 535

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                      N +I  LC  G+ + A E+F+ +    + AD +TYN +I G C +G++ 
Sbjct: 536 NKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVG 595

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           K+ +L  ++    + P+   + +LI    +         L   M  K + P A++   ++
Sbjct: 596 KSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLI 655

Query: 374 DLL 376
             L
Sbjct: 656 SGL 658



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 181/403 (44%), Gaps = 36/403 (8%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G     NT T   +I   C  G V +   L  Q     ++P   TYN LI G C A ++ 
Sbjct: 221 GTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYA 280

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
               +   M+ +   P++ T+  I++ LCKN +  EA R+ + +  R   P+   Y+T++
Sbjct: 281 SMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMI 340

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C  G    A +L+  M   G + +  +YN +++G  K+ + E A  LY EM +KG  
Sbjct: 341 HGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYG 400

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
            T VT N +   L    + + A ++F++M    + AD  TYN+ I G CK G + E + L
Sbjct: 401 TTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNL 460

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG--- 305
              L     +  +  Y  LI   CK G  E A  L   +  + L  +  TY+ M+HG   
Sbjct: 461 LNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLK 520

Query: 306 --------------------------------LCNDGQMDKAHDLFLDMEENAVAPNVII 333
                                           LC+ G+ D+A ++F  M E  +  + I 
Sbjct: 521 SGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAIT 580

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA-SIVSMVVDL 375
           + +LI GF +  K  K + LL+++  + + P A S  S+++ L
Sbjct: 581 YNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQL 623



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 170/364 (46%), Gaps = 5/364 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ ++ N + + L     V  AK +   + G    PD  +    +  LC      EA 
Sbjct: 120 CTPDPISSNMLFEALLDAKAVRAAK-MVRDIAG--FIPDSASLEQYVKCLCGVGFIEEAI 176

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST--LMD 129
            ++F++ + G++ S+V  N I+    K GK +        M++     +A T +   L+ 
Sbjct: 177 EVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQ 236

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            FC +G++ R  EL       G    + +YN LI G+C+ K       +   M+++   P
Sbjct: 237 AFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLP 296

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           T+ TY  +  GL +  +   A ++F +++    A D   Y T I GLC+ G   EA +L+
Sbjct: 297 TIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLW 356

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +     + +   YN ++ G  KSG  E A EL+  +  +      VT N +I  LC+ 
Sbjct: 357 FEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSR 416

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G+ D+A ++F  M E  +  + I + +LI GF +  K  + + LL+++  +   P  S+ 
Sbjct: 417 GKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLY 476

Query: 370 SMVV 373
            +++
Sbjct: 477 ELLI 480


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 115/352 (32%), Positives = 174/352 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P++  Y + + G C+ G    A  LFL M          TY +L+ GLC A    EA  +
Sbjct: 107 PDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAV 166

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   G  P    +++++  LC  G+  EA  LL   + +   PN   Y+ L+DG+C 
Sbjct: 167 FAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCS 226

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           TG +  A ++F  M+S GC  +  +Y  LI G+CK+ +VE A+ LY  M+  G+ P VVT
Sbjct: 227 TGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVT 286

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G      +EHA +L   M+   +A +  T    ID LCK+G I EA +   +L 
Sbjct: 287 YTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLV 346

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +++   Y  +ID LCKSG+ + A  L + +     V D   Y+ +I GLC + ++ 
Sbjct: 347 QKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLL 406

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A  L  DM E+ V  N + F  LI   +R  +      +  +M    V PD
Sbjct: 407 EAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPD 458



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 177/398 (44%), Gaps = 43/398 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P     NT++  L + G +   ++L  +M   N++    TY +LI+  CHA D   AKR 
Sbjct: 41  PPIRCLNTLLMALARHGMLSDMESLAARMPVRNLH----TYTTLINAYCHAGDLPAAKRH 96

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              ++  G+ P    +   +   C+ G    A RL  LM QR      FTY+ L+ G C 
Sbjct: 97  LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCG 156

Query: 134 TGKINRAEELFGSMESMGCKHDD-----------------------------------VS 158
            G +  A  +F  M   GC  D                                      
Sbjct: 157 AGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAV 216

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN LI+GYC   ++E A+ +++ M SKG  P V TY  L  G  +  +VE A+ L+  M 
Sbjct: 217 YNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMI 276

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC--LIDGLCKSGR 276
              +A +  TY T I G C  G++  A  L  ++    C L    + C  LID LCK GR
Sbjct: 277 EAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSME--ACGLAPNEWTCLVLIDALCKHGR 334

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +E A +   SL ++ +  + V Y  MI  LC  G+ D AH+L   +      P+  ++ +
Sbjct: 335 IEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSS 394

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           LI G  R NK  + I LL+ M E  V  +A   ++++D
Sbjct: 395 LIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILID 432



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 180/365 (49%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P++  Y+ ++ GLC  G   +A AL     G+   P+V  YN+LI G C   D   A 
Sbjct: 175 CAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAI 234

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M  +G  P+V T+  ++   CK+GK++ A  L   M++  + PN  TY+TL+ G 
Sbjct: 235 DIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQ 294

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A  L  SME+ G   ++ +  +LI+  CK+  +EEA      +V KGIK   
Sbjct: 295 CSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQ 354

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V Y ++   L +  + + A  L +++  +    D   Y++ IDGLC+   ++EA+ L   
Sbjct: 355 VIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLND 414

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + +   +  LID   +  R +    +   +    +  DVVTY + I   C DG+
Sbjct: 415 MIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGR 474

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           M+ A  + + M ++ V PN+  + TLI G+  +   S+    L  M +    P+    ++
Sbjct: 475 MEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTV 534

Query: 372 VVDLL 376
           ++ LL
Sbjct: 535 LLGLL 539



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 114/480 (23%), Positives = 189/480 (39%), Gaps = 121/480 (25%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC------HA- 64
           C PN  TY  +I G CK G V++A  L+ +M    + P+VVTY +LI G C      HA 
Sbjct: 245 CLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAF 304

Query: 65  -------------NDWN---------------EAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
                        N+W                EA++    ++ +G++ + V +  ++D L
Sbjct: 305 RLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDAL 364

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFG----------- 145
           CK+GK D A  L+  ++     P+A  YS+L+DG C   K+  A  L             
Sbjct: 365 CKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANA 424

Query: 146 ------------------------SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 181
                                    M + G K D V+Y + I  YC++  +E+A S+  +
Sbjct: 425 VPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQ 484

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC-KNG 240
           M+  G++P + TYNTL  G   +  V  A    + M  +    +  +Y   +  L  KN 
Sbjct: 485 MIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNS 544

Query: 241 Y---IVEAVELFRTLGI------------LKCELDIQAYNCLIDGLCKSGRLE------- 278
           Y   + +++ L++ + +            L+C      Y+C I  L K  RLE       
Sbjct: 545 YHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLV 604

Query: 279 ----------------------------IALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
                                        AL    S+ +R  +  + +Y  +I  LC +G
Sbjct: 605 GMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEG 664

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
               A  +F D+       + I +  LI G ++    +    LL  M+E+   P ++I S
Sbjct: 665 SFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYS 724



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/236 (20%), Positives = 84/236 (35%), Gaps = 51/236 (21%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN---- 68
           +PN  TYNT+I G    G V +A +    M      P+  +Y  L+  L   N ++    
Sbjct: 491 RPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVA 550

Query: 69  -----------------------------------------------EAKRLFFEMMDQG 81
                                                          EAK     M    
Sbjct: 551 DSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSAN 610

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
           + PS   +  +++   +   + EA R LD MV+R+  P   +Y  ++   C  G  + A+
Sbjct: 611 LTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAK 670

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
            +FG + S     D++++ ILI+G  +     +   L   M  +  +P    Y+ L
Sbjct: 671 SIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRL 726



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/167 (20%), Positives = 64/167 (38%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           I + C   +  Y+  I  L K   +++AK+  + M+  N+ P    Y  +I         
Sbjct: 572 IKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLL 631

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA R    M+ +   P + ++  I+  LC+ G    A  +   ++ ++   +   +  L
Sbjct: 632 KEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKIL 691

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
           +DG    G       L   ME   C+     Y+ L        E +E
Sbjct: 692 IDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTGEITVTSEAQE 738


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 194/366 (53%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC P+ +T+ ++IDGL K G VD A  ++ +M   +   + + Y SLI    +     + 
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            +++ +M++Q   P +   N  MD + K G+ ++   + + +  R   P+A +YS L+ G
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               G  N   ELF SM+  GC  D  +YNI+I+G+CK  +V +A  L  EM +KG +PT
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY ++  GL +I +++ A  LFEE +   +  +   Y++ IDG  K G I EA  +  
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            L       ++  +N L+D L K+  +  AL  F+S+       + VTY I+I+GLC   
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           + +KA   + +M++  + P+ I + T+I G  +    ++   L  + K    +PD++  +
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYN 801

Query: 371 MVVDLL 376
            +++ L
Sbjct: 802 AMIEGL 807



 Score =  197 bits (500), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 196/363 (53%), Gaps = 1/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ + YN I+  L K G VD+A  +F +MK ++  P++ TYN LI  LC A   + A  L
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFEL 399

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   G+ P+V T N+++D LCK+ K+DEA  + + M  +   P+  T+ +L+DG   
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 459

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A +++  M    C+ + + Y  LI  +  +   E+   +Y++M+++   P +  
Sbjct: 460 VGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQL 519

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            NT    +F+  + E    +FEE++      D  +Y+  I GL K G+  E  ELF ++ 
Sbjct: 520 LNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMK 579

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C LD +AYN +IDG CK G++  A +L   +  +     VVTY  +I GL    ++D
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A+ LF + +   +  NV+I+ +LI GF ++ +  +   +L ++ +K + P+    + ++
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 699

Query: 374 DLL 376
           D L
Sbjct: 700 DAL 702



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 202/434 (46%), Gaps = 71/434 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN------------------------ 48
           +P    + T+I G  KEG VD A +L  +MK  +++                        
Sbjct: 200 EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWK 259

Query: 49  -----------PDVVTYNSLIHGLCHANDWNEAKRLF----------------------- 74
                      PD VTY S+I  LC AN  +EA  +F                       
Sbjct: 260 FFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYG 319

Query: 75  --------FEMMD----QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
                   + +++    +G  PSV+ +N I+  L K GK+DEA ++ + M ++D  PN  
Sbjct: 320 SAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLS 378

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TY+ L+D  C  GK++ A EL  SM+  G   +  + NI+++  CK+++++EA +++ EM
Sbjct: 379 TYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM 438

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
             K   P  +T+ +L  GL ++ +V+ A K++E+M   D   ++  Y + I     +G  
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRK 498

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            +  ++++ +    C  D+Q  N  +D + K+G  E    +F  +  R  V D  +Y+I+
Sbjct: 499 EDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSIL 558

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           IHGL   G  ++ ++LF  M+E     +   +  +I GF +  K +K  +LL +MK K  
Sbjct: 559 IHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618

Query: 363 MPDASIVSMVVDLL 376
            P       V+D L
Sbjct: 619 EPTVVTYGSVIDGL 632



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 180/363 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN +ID LC+ G +D A  L   M+   + P+V T N ++  LC +   +EA  +
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAM 434

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM  +   P  +TF  ++D L K G++D+A ++ + M+  D R N+  Y++L+  F  
Sbjct: 435 FEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFN 494

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+     +++  M +  C  D    N  ++   K  E E+  +++ E+ ++   P   +
Sbjct: 495 HGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARS 554

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  GL +        +LF  M+      DT  YN  IDG CK G + +A +L   + 
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E  +  Y  +IDGL K  RL+ A  LF     + +  +VV Y+ +I G    G++D
Sbjct: 615 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 674

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A+ +  ++ +  + PN+  + +L+   V+  + ++ +     MKE K  P+     +++
Sbjct: 675 EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734

Query: 374 DLL 376
           + L
Sbjct: 735 NGL 737



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 178/364 (48%), Gaps = 1/364 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P    Y T+I         D    LF QM+     P V  + +LI G       + A  
Sbjct: 165 RPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALS 224

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM    +   +V +NV +D   K GK+D A +    +    ++P+  TY++++   C
Sbjct: 225 LLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLC 284

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +++ A E+F  +E         +YN +I GY    + +EA SL     +KG  P+V+
Sbjct: 285 KANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVI 344

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN +   L ++ +V+ ALK+FEEM++ D A + STYN  ID LC+ G +  A EL  ++
Sbjct: 345 AYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSM 403

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +++  N ++D LCKS +L+ A  +F  +  +V   D +T+  +I GL   G++
Sbjct: 404 QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRV 463

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A+ ++  M ++    N I++ +LI  F    +     ++   M  +   PD  +++  
Sbjct: 464 DDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTY 523

Query: 373 VDLL 376
           +D +
Sbjct: 524 MDCM 527



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 151/271 (55%), Gaps = 4/271 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +T  YN +IDG CK G V+KA  L  +MK +   P VVTY S+I GL   +  +EA 
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF E   + ++ +VV ++ ++D   K G++DEA  +L+ ++Q+ + PN +T+++L+D  
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL 702

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +IN A   F SM+ + C  + V+Y ILING CK ++  +A   ++EM  +G+KP+ 
Sbjct: 703 VKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPST 762

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++Y T+  GL +   +  A  LF+  + +    D++ YN  I+GL      ++A  LF  
Sbjct: 763 ISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEE 822

Query: 252 LGILKCELDIQAYNC--LIDGLCKSGRLEIA 280
               +  L I    C  L+D L K+  LE A
Sbjct: 823 --TRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 137/279 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +Y+ +I GL K GF ++   LF  MK +    D   YN +I G C     N+A +L
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G +P+VVT+  ++D L K  ++DEA  L +    + +  N   YS+L+DGF  
Sbjct: 610 LEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGK 669

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+I+ A  +   +   G   +  ++N L++   K +E+ EAL  ++ M      P  VT
Sbjct: 670 VGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT 729

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL ++ +   A   ++EMQ+  +   T +Y T I GL K G I EA  LF    
Sbjct: 730 YGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFK 789

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
                 D   YN +I+GL    R   A  LF    RR L
Sbjct: 790 ANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 155/324 (47%), Gaps = 1/324 (0%)

Query: 53  TYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM 112
           +YNSL+  +    +++   ++  EM   G  PSV T   ++    K  K+ E   ++ +M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159

Query: 113 VQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
            +   RP    Y+TL+  F      +    LF  M+ +G +     +  LI G+ K   V
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           + ALSL  EM S  +   +V YN       ++ +V+ A K F E++ + +  D  TY + 
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           I  LCK   + EAVE+F  L   +      AYN +I G   +G+ + A  L      +  
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
           +  V+ YN ++  L   G++D+A  +F +M+++A APN+  +  LI    R  K     E
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFE 398

Query: 353 LLHKMKEKKVMPDASIVSMVVDLL 376
           L   M++  + P+   V+++VD L
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRL 422



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 163/374 (43%), Gaps = 34/374 (9%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           +YN+++  + +    D    +  +M      P V T   ++ G   AN   E   +   M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
                +P+   +  ++         D    L   M +    P    ++TL+ GF   G++
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  L   M+S     D V YN+ I+ + K  +V+ A   + E+ + G+KP  VTY ++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF---RTLG- 253
              L + ++++ A+++FE ++++     T  YNT I G    G   EA  L    R  G 
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339

Query: 254 ---------ILKC---------------------ELDIQAYNCLIDGLCKSGRLEIALEL 283
                    IL C                       ++  YN LID LC++G+L+ A EL
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFEL 399

Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
             S+ +  L  +V T NIM+  LC   ++D+A  +F +M+     P+ I F +LI G  +
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 459

Query: 344 INKPSKVIELLHKM 357
           + +     ++  KM
Sbjct: 460 VGRVDDAYKVYEKM 473



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 5/231 (2%)

Query: 137 INRAEELFGSMESMG-CKHDDVSYN--ILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +NRA E F   E      H   SYN  +L+   C+N +  +   +  EM   G  P+V T
Sbjct: 78  VNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALD--QILGEMSVAGFGPSVNT 135

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
              + LG  + +++     + + M++       S Y T I       +    + LF+ + 
Sbjct: 136 CIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQ 195

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            L  E  +  +  LI G  K GR++ AL L   +    L AD+V YN+ I      G++D
Sbjct: 196 ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVD 255

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            A   F ++E N + P+ + + ++I    + N+  + +E+   +++ + +P
Sbjct: 256 MAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 306



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 54/94 (57%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+T++Y T+I GL K G + +A ALF + K     PD   YN++I GL + N   +A  
Sbjct: 759 KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFS 818

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           LF E   +G+     T  V++D L KN  +++A+
Sbjct: 819 LFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAA 852


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 118/377 (31%), Positives = 190/377 (50%), Gaps = 17/377 (4%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N +  ++    LC  G  +KA ++  +M G+   PD  TY+ ++  LC+A+    A  LF
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLF 506

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM   G+   V T+ +++D  CK G +++A +  + M +    PN  TY+ L+  +   
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKA 566

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV-SKGI------ 187
            K++ A ELF +M S GC  + V+Y+ LI+G+CK  ++E+A  ++  M  SK +      
Sbjct: 567 KKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMY 626

Query: 188 ----------KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
                     +P VV Y  L  G  ++H+VE A KL + M  +    +   Y+  IDGLC
Sbjct: 627 FKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 686

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           K G + EA E+   +        +  Y+ LID   K  R ++A ++   +       +VV
Sbjct: 687 KVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVV 746

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            Y  MI GLC  G+ D+A+ L   MEE    PNV+ +  +I GF RI K    +ELL +M
Sbjct: 747 IYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERM 806

Query: 358 KEKKVMPDASIVSMVVD 374
             K V P+     +++D
Sbjct: 807 GSKGVAPNYVTYRVLID 823



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 177/344 (51%), Gaps = 4/344 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V Y  ++DG CK   V++A+ L   M  E   P+ + Y++LI GLC     +EA+ 
Sbjct: 637 RPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 696

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM + G   ++ T++ ++D   K  + D AS++L  M++    PN   Y+ ++DG C
Sbjct: 697 VKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 756

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK + A +L   ME  GC+ + V+Y  +I+G+ +  ++E  L L   M SKG+ P  V
Sbjct: 757 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYV 816

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L     +   ++ A  L EEM++       + Y   I+G   N   +E++ L   +
Sbjct: 817 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF--NKEFIESLGLLDEI 874

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP--RRVLVADVVTYNIMIHGLCNDG 310
           G       +  Y  L+D L K+ RLE+AL L   +      LV    TYN +I  LC   
Sbjct: 875 GQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 934

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           ++DKA  LF +M +  V P +  F +LI G  R +K S+ + LL
Sbjct: 935 KVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLL 978



 Score =  174 bits (441), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 187/386 (48%), Gaps = 23/386 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TV Y  +I GLC+    ++A     +M+  +  P+VVTY++L+ G  +       KR+
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              MM +G  PS   FN ++   C +G    A +LL  MV+    P    Y+ L+   C 
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICG 419

Query: 134 TGK------INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
                    +  AE+ +  M + G   + ++ +      C   + E+A S+ REM+ +G 
Sbjct: 420 DKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 479

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P   TY+ +   L    ++E A  LFEEM+R  + AD  TY   +D  CK G I +A +
Sbjct: 480 IPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            F  +  + C  ++  Y  LI    K+ ++  A ELF ++     + ++VTY+ +I G C
Sbjct: 540 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC 599

Query: 308 NDGQMDKAHDLF-----------LDM------EENAVAPNVIIFVTLIHGFVRINKPSKV 350
             GQM+KA  +F           +DM      ++N+  PNV+I+  L+ GF ++++  + 
Sbjct: 600 KAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEA 659

Query: 351 IELLHKMKEKKVMPDASIVSMVVDLL 376
            +LL  M  +   P+  +   ++D L
Sbjct: 660 RKLLDAMSMEGCEPNQIVYDALIDGL 685



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 165/369 (44%), Gaps = 11/369 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TYN +I    K   +D A  +  +M   N+  D  T     + LC    W EA  
Sbjct: 232 RPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALT 291

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M  +   P  V +  ++  LC+    +EA   L+ M      PN  TYSTL+ G C
Sbjct: 292 L---METENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCG-C 347

Query: 133 LTGK-INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           L  K + R + +   M   GC      +N L++ YC + +   A  L ++MV  G  P  
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGY 407

Query: 192 VTYNTLFLGL------FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           V YN L   +         H +E A K + EM    V  +    ++F   LC  G   +A
Sbjct: 408 VVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKA 467

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             + R +       D   Y+ ++  LC + ++E+A  LF  + R  LVADV TY IM+  
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            C  G +++A   F +M E    PNV+ +  LIH +++  K S   EL   M  +  +P+
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587

Query: 366 ASIVSMVVD 374
               S ++D
Sbjct: 588 IVTYSALID 596



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 166/320 (51%), Gaps = 5/320 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN + Y+ +IDGLCK G +D+A+ +  +M        + TY+SLI         + A 
Sbjct: 671 CEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 730

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++  +M++    P+VV +  ++D LCK GK DEA +L+ +M ++  +PN  TY+ ++DGF
Sbjct: 731 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 790

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GKI    EL   M S G   + V+Y +LI+  CKN  ++ A +L  EM         
Sbjct: 791 GRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHA 850

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y  +  G F    +E +L L +E+ +DD A   S Y   +D L K   +  A+ L   
Sbjct: 851 AGYRKVIEG-FNKEFIE-SLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEE 908

Query: 252 LGILKCEL-DIQA-YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           +      L D  + YN LI+ LC + +++ A  LF  + ++ ++ ++ T+  +I GL  +
Sbjct: 909 VATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRN 968

Query: 310 GQMDKAHDLFLDMEENAVAP 329
            ++ +A  L LD   + V P
Sbjct: 969 SKISEAL-LLLDFISHMVCP 987



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/339 (20%), Positives = 125/339 (36%), Gaps = 48/339 (14%)

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           G + +   +N ++D + ++        LL  +   D        + L+  +C +G  + A
Sbjct: 160 GYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIA 219

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
            E  G ++    +    +YN LI  + K   ++ A  ++REM    ++    T       
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYS 279

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
           L ++ +   AL L   M+ ++   DT  Y   I GLC+     EA++    +    C  +
Sbjct: 280 LCKVGKWREALTL---METENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPN 336

Query: 261 IQAY-----------------------------------NCLIDGLCKSGRLEIALELFR 285
           +  Y                                   N L+   C SG    A +L +
Sbjct: 337 VVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 396

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA----VAPNVIIFVTLIHGF 341
            + +       V YNI+I  +C D      H   L++ E A    +A  V++    +  F
Sbjct: 397 KMVKCGHTPGYVVYNILIGSICGDKDSLSCH--LLELAEKAYSEMLATGVVLNKINVSSF 454

Query: 342 VR----INKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            R      K  K   ++ +M  +  +PD S  S V+  L
Sbjct: 455 TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYL 493


>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
          Length = 551

 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 185/364 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N + YN+++D   +E   D+   +   M+ E I P V TY  L+ GL  A D  + + 
Sbjct: 175 KVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEA 234

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM  + +   V  ++ +++  C+ G +  AS + D  V   + PN  TY  L++GFC
Sbjct: 235 VFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFC 294

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  AE L   M+  G   + + +N +I+GYC+   V++AL +   M   GI+  V 
Sbjct: 295 KIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVY 354

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GL   ++++ A  L   M    V  +  +Y T I   C  G +VEA  LFR +
Sbjct: 355 TYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREM 414

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                E  +  YN ++DG  K G +  A    + + ++ LV D+ +Y  ++HG C +G++
Sbjct: 415 AGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKV 474

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  LF +M++    PN++ +  LI G  +  +  +  +L   M    + PD ++ S +
Sbjct: 475 DVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSAL 534

Query: 373 VDLL 376
           V  L
Sbjct: 535 VGSL 538



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 166/339 (48%), Gaps = 5/339 (1%)

Query: 30  GFVDKAKALFLQMKGENINPDVVTYNS---LIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           G +D A  L  Q       PD VT  S   ++ G C +     A++L  EM   GV+ + 
Sbjct: 121 GHLDTAADLLKQ--AATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNA 178

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
           + +N ++D   +    D  + +L +M    + P   TY+ L+DG      I + E +F  
Sbjct: 179 LCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEE 238

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M+S     D   Y+ +IN YC+   V  A  ++ E V  GI+P   TY  L  G  +I Q
Sbjct: 239 MKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQ 298

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           +E A  L  +MQ   V  +   +NT IDG C+   + +A+E+   +  +  ELD+  YN 
Sbjct: 299 MEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNT 358

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           L  GL ++ R++ A  L R +  + +  + V+Y  +I   CN+G M +A  LF +M  N 
Sbjct: 359 LACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 418

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             P+++ +  ++ G+++     +      +M++K ++PD
Sbjct: 419 AEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPD 457



 Score =  157 bits (397), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 163/336 (48%), Gaps = 35/336 (10%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P   TY  ++DGL     + K +A+F +MK +N++ DV  Y+S+I+  C A +   A  
Sbjct: 210 EPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASE 269

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F E +  G++P+  T+  +++  CK G+M+ A  L+  M  R V  N   ++T++DG+C
Sbjct: 270 VFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYC 329

Query: 133 LTGKINRAEELFGSMESMGCKHD-----------------------------------DV 157
               +++A E+   ME MG + D                                    V
Sbjct: 330 RKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHV 389

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           SY  LI+ +C   ++ EA  L+REM   G +P++VTYN +  G  +   +  A +  +EM
Sbjct: 390 SYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEM 449

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
           ++  +  D  +Y   + G C NG +  A+ LF  +     + ++ AY  LI GL K GR 
Sbjct: 450 EKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRS 509

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           E A +L+ ++    L  D   Y+ ++  L  D + +
Sbjct: 510 EEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQN 545



 Score =  144 bits (363), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 129/242 (53%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G   +PN  TY  +I+G CK G ++ A+ L   M+   +  + + +N++I G C  N  
Sbjct: 275 VGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMV 334

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  +   M   G++  V T+N +   L +  +MDEA  LL +M+++ VRPN  +Y+TL
Sbjct: 335 DKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTL 394

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +   C  G +  A  LF  M   G +   V+YN++++GY K   + EA    +EM  KG+
Sbjct: 395 ISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGL 454

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P + +Y  L  G     +V+ AL+LFEEM++     +   Y   I GL K G   EA +
Sbjct: 455 VPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQ 514

Query: 248 LF 249
           L+
Sbjct: 515 LY 516



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 85/185 (45%)

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           T ++ + +  G  +  +V HA +L +EM R  V  +   YN+ +D   +        E+ 
Sbjct: 142 TPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEML 201

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + +     E  +  Y  L+DGL  +  +     +F  +  + L  DV  Y+ +I+  C  
Sbjct: 202 KVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRA 261

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G + +A ++F +   N + PN   +  LI+GF +I +      L+  M+ + V  +  + 
Sbjct: 262 GNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVF 321

Query: 370 SMVVD 374
           + ++D
Sbjct: 322 NTMID 326



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 46/94 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +Y  ++ G C  G VD A  LF +MK     P++V Y +LI GL       EA +L
Sbjct: 456 PDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQL 515

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR 107
           +  M+  G+ P    ++ ++  L  + K +   R
Sbjct: 516 YDNMLGDGLTPDDALYSALVGSLHTDKKQNVKPR 549


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  197 bits (500), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 190/365 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N V Y T++ G  +E +  +A  LF  M    I PDV T+N L+H LC   +  E++
Sbjct: 177 CQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESE 236

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL  +++ +G+  ++ TFN+ +  LC+ G +  A  +LD +++  + P+  TY+TL+ G 
Sbjct: 237 RLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGL 296

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    +  AE+    + + G + D  +YN LI+GYCK   ++ A  + +  + KG  P  
Sbjct: 297 CKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDE 356

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY +L  GL +  +++ AL LF       +      YN  I GLC+ G I++A+++   
Sbjct: 357 FTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNE 416

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  DI  YN +I+GLCK G +  A  L      +  V DV T+N +I G C   +
Sbjct: 417 MSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLK 476

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           M+    +   M  + V P+VI + ++++G  +  K   ++E    M EK  +P+    ++
Sbjct: 477 METTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNI 536

Query: 372 VVDLL 376
           + + L
Sbjct: 537 LTESL 541



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 182/346 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T+N  I GLC++G +  A ++   +  E + PDVVTYN+LI GLC  ++  EA++  
Sbjct: 250 NLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYL 309

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            ++++ G++P   T+N ++D  CK G +  A ++L   + +   P+ FTY +L++G C  
Sbjct: 310 HKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQN 369

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            +I+RA  LF +    G K   + YN+LI G C+   + +AL +  EM   G    + TY
Sbjct: 370 DEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTY 429

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N +  GL ++  V  A  L  +        D  T+NT IDG CK   +   +++   +  
Sbjct: 430 NLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWS 489

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D+  YN +++GL K+ + E  +E F ++  +  V + +TYNI+   LC  G++++
Sbjct: 490 HGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNE 549

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           A DL  ++    + P+ + F T+I GF          +L  +M E+
Sbjct: 550 ALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQ 595



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 186/361 (51%), Gaps = 4/361 (1%)

Query: 9   GVVCK---PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G +CK   P+  TY ++I+GLC+   +D+A ALF    G+ + P V+ YN LI GLC   
Sbjct: 346 GAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEG 405

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
              +A ++  EM + G    + T+N++++ LCK G + +A+ L++  + +   P+ FT++
Sbjct: 406 LILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFN 465

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+DG+C   K+    ++   M S G   D ++YN ++NG  K  + E+ +  +  MV K
Sbjct: 466 TLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEK 525

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G  P  +TYN L   L +  +V  AL L +E+    +  DT ++ T I G   NG +  A
Sbjct: 526 GCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGA 585

Query: 246 VELFRTLG-ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
            +LFR +G   K       YN +I+   +   L +  +LF  +       D  TY +MI 
Sbjct: 586 YQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMID 645

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G C  G  D  +   L+M E    P++  F  +I+     ++  + ++++H M    ++P
Sbjct: 646 GFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVP 705

Query: 365 D 365
           +
Sbjct: 706 E 706



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 188/365 (51%), Gaps = 1/365 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TYNT+IDG CK G +  A+ +      +   PD  TY SLI+GLC  ++ + A  
Sbjct: 318 EPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALA 377

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF   + +G++P+V+ +N+++  LC+ G + +A ++++ M +     + +TY+ +++G C
Sbjct: 378 LFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLC 437

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A  L     + G   D  ++N LI+GYCK  ++E  + +  +M S G+ P V+
Sbjct: 438 KMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVI 497

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN++  GL +  + E  ++ FE M       +  TYN   + LCK G + EA++L   +
Sbjct: 498 TYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEI 557

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA-DVVTYNIMIHGLCNDGQ 311
                  D  ++  +I G   +G L+ A +LFR +  +  V+    TYNIMI+       
Sbjct: 558 LNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLD 617

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +     LFL+M     AP+   +  +I GF          + L +M EK  +P  +    
Sbjct: 618 LHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGR 677

Query: 372 VVDLL 376
           V++ L
Sbjct: 678 VINCL 682



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 187/400 (46%), Gaps = 35/400 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ ++YN I++ L + G+  +A  +FL+MK   I PDV T+   I   C     + A 
Sbjct: 107 CEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSAL 166

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL   M+ QG Q + V +  ++    +     EA  L + M++  + P+  T++ L+   
Sbjct: 167 RLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTL 226

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G++  +E L   +   G   +  ++NI I G C+   +  A+S+   ++ +G+ P V
Sbjct: 227 CKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDV 286

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF-- 249
           VTYNTL  GL +   V  A K   ++    +  D  TYNT IDG CK G +  A ++   
Sbjct: 287 VTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQG 346

Query: 250 ---------------------------RTLGILKCEL------DIQAYNCLIDGLCKSGR 276
                                      R L +    L       +  YN LI GLC+ G 
Sbjct: 347 AICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGL 406

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +  AL++   +      +D+ TYN++I+GLC  G +  A++L  D       P+V  F T
Sbjct: 407 ILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNT 466

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           LI G+ +  K    I++L+KM    V PD    + V++ L
Sbjct: 467 LIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGL 506



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 183/362 (50%), Gaps = 1/362 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+I GLCK   V +A+    ++    + PD  TYN+LI G C       A+++
Sbjct: 284 PDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKI 343

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
               + +G  P   T+  +++ LC+N ++D A  L +  + + ++P    Y+ L+ G C 
Sbjct: 344 LQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQ 403

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G I +A ++   M   GC  D  +YN++ING CK   V +A +L  + ++KG  P V T
Sbjct: 404 EGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFT 463

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +NTL  G  +  ++E  +++  +M    V  D  TYN+ ++GL K     + +E F T+ 
Sbjct: 464 FNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMV 523

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  +   YN L + LCK+G++  AL+L   +  + +  D V++  +I G  N+G + 
Sbjct: 524 EKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLK 583

Query: 314 KAHDLFLDM-EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            A+ LF  M E+  V+     +  +I+ F          +L  +M      PD     ++
Sbjct: 584 GAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVM 643

Query: 373 VD 374
           +D
Sbjct: 644 ID 645



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 181/349 (51%)

Query: 28  KEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVV 87
           ++G V +A  +F +M   N  P V++YN++++ L  +  + +A ++F  M + G+ P V 
Sbjct: 88  RKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVY 147

Query: 88  TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
           TF + +   C+  +   A RLL+ MV +  + NA  Y T++ GF        A ELF  M
Sbjct: 148 TFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDM 207

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
             +G   D  ++N L++  CK  EV+E+  L  +++ KG+   + T+N    GL     +
Sbjct: 208 LRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGML 267

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
             A+ + + + R+ +  D  TYNT I GLCKN  +VEA +    L     E D   YN L
Sbjct: 268 SGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTL 327

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           IDG CK G L+ A ++ +    +  V D  TY  +I+GLC + ++D+A  LF       +
Sbjct: 328 IDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGL 387

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            P VI++  LI G  +     + ++++++M E     D    ++V++ L
Sbjct: 388 KPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGL 436



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 167/329 (50%), Gaps = 1/329 (0%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N  +G   KP  + YN +I GLC+EG + +A  +  +M     + D+ TYN +I+GLC  
Sbjct: 380 NAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKM 439

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
              ++A  L  + + +G  P V TFN ++D  CK  KM+   ++L+ M    V P+  TY
Sbjct: 440 GCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITY 499

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           +++++G     K     E F +M   GC  + ++YNIL    CK  +V EAL L  E+++
Sbjct: 500 NSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILN 559

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCKNGYIV 243
           KGI P  V++ T+  G      ++ A +LF  M ++  V+  T+TYN  I+   +   + 
Sbjct: 560 KGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLH 619

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
              +LF  +G   C  D   Y  +IDG C +G  +   +    +  +  +  + T+  +I
Sbjct: 620 MGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVI 679

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           + LC   ++ +A D+   M  N + P V+
Sbjct: 680 NCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 140/309 (45%), Gaps = 7/309 (2%)

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDVRPNAFTYS 125
           +N+ KR      + G + S++T+  I+ +L  +G       +L +  +  D       Y 
Sbjct: 27  FNKVKR------EDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEGVYI 80

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
             M  +   GK+  A ++F  M+   C+   +SYN ++N   ++   ++A  ++  M + 
Sbjct: 81  GAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNV 140

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           GI P V T+           +   AL+L   M       +   Y T + G  +  Y VEA
Sbjct: 141 GIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEA 200

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            ELF  +  +    D+  +N L+  LCK G ++ +  L   + ++ + +++ T+NI I G
Sbjct: 201 YELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQG 260

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC  G +  A  +   +    + P+V+ + TLI G  + +   +  + LHK+    + PD
Sbjct: 261 LCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPD 320

Query: 366 ASIVSMVVD 374
               + ++D
Sbjct: 321 GFTYNTLID 329



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 2/211 (0%)

Query: 168 KNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGL-FEIHQVEHALKLFEEMQRDDVAAD 225
           + K+  +AL ++ ++  + G K +++TY  +   L F  + V     L E     D +  
Sbjct: 16  QQKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLL 75

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
              Y   +    + G + EAV++F  +    CE  + +YN +++ L +SG  + A ++F 
Sbjct: 76  EGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFL 135

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            +    +V DV T+ I I   C   +   A  L  +M       N + + T++ GF   N
Sbjct: 136 RMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEEN 195

Query: 346 KPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              +  EL + M    + PD S  + ++  L
Sbjct: 196 YRVEAYELFNDMLRIGIFPDVSTFNKLLHTL 226


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  197 bits (500), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 183/364 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+T TY ++I G C++  +D A  +F QM  E   P+ VTY++LI+GLC +   NEA  
Sbjct: 247 SPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD 306

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+  G+ P+  T    +  LC  G  ++A RL   M  +   PN +TY+ L+ G C
Sbjct: 307 LIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLC 366

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           ++G +  A  LF  M   G   + V+YN LIN   +N+ ++ A  +   M   G  P +V
Sbjct: 367 VSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIV 426

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN +  G   +   + A+ +   M +   +A+  TYNT I G C +G    A+ +   +
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C+ D  +Y  LI G CK  ++E A  LF  +    L  + VTY  +I G C D ++
Sbjct: 487 RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  L   M+ +   PNV  +  LIHG  + N  S   EL   M E+ + P+    + +
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 606

Query: 373 VDLL 376
           +D L
Sbjct: 607 IDGL 610



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 185/389 (47%), Gaps = 35/389 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDK-----------------------------------AK 36
           C+PNTVTY+T+I+GLC  G V++                                   A 
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340

Query: 37  ALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
            LF+ MK +   P+V TY +LI GLC +     A  LF  M   GV P+ VT+N +++ L
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 400

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
            +N ++  A  +L+LM +    PN  TY+ ++ G+C+ G   +A  +  +M   G   + 
Sbjct: 401 VENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANL 460

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           V+YN +I GYC +     AL +   M   G KP   +Y  L  G  +I ++E A  LF E
Sbjct: 461 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNE 520

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M  D +  +  TY   IDG CK+  +  A  L   +    C  ++Q YN LI GL K   
Sbjct: 521 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 580

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
              A EL + +    +  +VVTY  MI GLC +G    A ++F  M E    PN++ + +
Sbjct: 581 FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSS 640

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LI    +  K  +   L  +++   ++PD
Sbjct: 641 LIRALGQEGKVEEAENLFAELERHGLIPD 669



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/328 (33%), Positives = 170/328 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNTVTYN +I+ L +   +  A  +   M     +P++VTYN +I G C   D  +A  +
Sbjct: 388 PNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLV 447

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+ +G   ++VT+N I+   C +G    A R+LDLM     +P+ ++Y+ L+ GFC 
Sbjct: 448 MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 507

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+  A  LF  M   G   ++V+Y  LI+GYCK+++++ A SL   M   G +P V T
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  GL + +    A +L + M  + +  +  TY   IDGLCKNG    A+E+F  + 
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  ++  Y+ LI  L + G++E A  LF  L R  L+ D +TY  MI      G+++
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 687

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            A +    M +    P +  +  LI G 
Sbjct: 688 HAFNFLGRMIKAGCQPTLWTYGVLIKGL 715



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 179/384 (46%), Gaps = 24/384 (6%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  +IDG CK+  +D A +L   MK     P+V TYN LIHGL   N+++ A+ L
Sbjct: 528 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 587

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+++G+ P+VVT+  ++D LCKNG    A  + + M+++   PN  TYS+L+     
Sbjct: 588 CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 647

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  AE LF  +E  G   D+++Y  +I  Y  + +VE A +    M+  G +PT+ T
Sbjct: 648 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 707

Query: 194 YNTLFLGL------------------------FEIHQVEHALKLFEEMQRDDVAADTSTY 229
           Y  L  GL                        ++    +    +  ++   D        
Sbjct: 708 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           N  +  L   G   EA EL  ++       D +AYN L+  L +   +++A+ +F+ +  
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
           +     +  Y  +I  LC   +  +A   F +M      P+ ++   LI G +R      
Sbjct: 828 QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDL 887

Query: 350 VIELLHKMKEKKVMPDASIVSMVV 373
            +E LH M+ ++ MP   I +++ 
Sbjct: 888 CMEFLHIMETRRYMPSFHIYTILA 911



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 150/301 (49%), Gaps = 6/301 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYN +I G C  G   KA  +   M     + ++VTYN++I G C + +   A 
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R+   M D G +P   ++  ++   CK  KM+ A  L + MV   + PN  TY+ L+DG+
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++ A  L   M+  GC+ +  +YN+LI+G  K      A  L + M+ +GI P V
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY  +  GL +      AL++F +M       +  TY++ I  L + G + EA  LF  
Sbjct: 601 VTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE 660

Query: 252 L---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           L   G++  E+    Y  +I+    SG++E A      + +      + TY ++I GL N
Sbjct: 661 LERHGLIPDEI---TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN 717

Query: 309 D 309
           +
Sbjct: 718 E 718



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 144/300 (48%), Gaps = 1/300 (0%)

Query: 62  CHANDWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           CH+ +       F +M+ Q G++  +  ++ ++  L + G           M+   V+PN
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
              Y+ +++  C  G +  AE +   +       D  +Y  +I G+C+  +++ AL ++ 
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           +M  +G +P  VTY+TL  GL +  +V  A  L  EM    +     T    I  LC  G
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
              +A  LF  +    CE ++  Y  LI GLC SG L++A+ LF  + R  +  + VTYN
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +I+ L  + ++  A  +   M  N  +PN++ +  +I G+  +  P K + +++ M ++
Sbjct: 395 ALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 98/198 (49%)

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
           Y  M+S+G++P ++ YN +   L +   V  A  + +++   +++ DT TY + I G C+
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 262

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
              +  A+++F  +    CE +   Y+ LI+GLC SGR+  A +L R +    ++    T
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
               I  LC+ G  + A  LF+DM+     PNV  +  LI G          I L H+M 
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382

Query: 359 EKKVMPDASIVSMVVDLL 376
              V P+    + ++++L
Sbjct: 383 RDGVFPNTVTYNALINIL 400


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  197 bits (500), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 193/365 (52%), Gaps = 2/365 (0%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
            C PN  TY  +ID LC+EG +++A  +F +M    + P ++T+N+LI+G C    W  +
Sbjct: 330 ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEG-WVVS 388

Query: 71  KRLFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
                 +M++G  +P++ T+N +M+ LC+  K  +A  LL  +V   + P+  TY+ L+D
Sbjct: 389 AFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVD 448

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GFC  G++N A  +F SM S G + D  ++  LI+G CK   +E+A  +   MV KGI  
Sbjct: 449 GFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISL 508

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
             VT+  L  G  +I + +    LFE M  +       T+N F+D L K+  + EA  + 
Sbjct: 509 DEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAML 568

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +        +  +  LI+G C++G   ++L++   + +     +V TY I+I+GLCN+
Sbjct: 569 GKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNN 628

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++++A  +   M    V+PN   +  L+   V+  +  +  +++  M +    P++ I 
Sbjct: 629 GRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIY 688

Query: 370 SMVVD 374
           S ++ 
Sbjct: 689 SALLS 693



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 191/431 (44%), Gaps = 71/431 (16%)

Query: 17  VTYNTIIDGLCKEGFVDKAK-----------------------------------ALFLQ 41
           + Y T+++ LCK GFV  A+                                    +F +
Sbjct: 195 IDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEK 254

Query: 42  M-KGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
           M K EN  P+ VTY+ LIHGLC A    EA +L  EM+++G QPS  T+ V++   C  G
Sbjct: 255 MSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIG 314

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
             D+A ++LD M  +   PN  TY+ L+D  C  GKI  A  +F  M   G     +++N
Sbjct: 315 MTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFN 374

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            LINGYCK   V  A  L   M     KP + TYN L  GL  + +   A  L   +  +
Sbjct: 375 ALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN 434

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            +  D  TYN  +DG CK G +  A  +F ++     E D   +  LIDGLCK GRLE A
Sbjct: 435 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 494

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN--------------- 325
             +  S+ ++ +  D VT+  +I G C  G+      LF +M EN               
Sbjct: 495 NGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDA 554

Query: 326 --------------------AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
                                + P+V+    LI G  R  + +  +++L +MK+    P+
Sbjct: 555 LGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 614

Query: 366 ASIVSMVVDLL 376
               +++++ L
Sbjct: 615 VYTYTIIINGL 625



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 174/332 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  +T+N +I+G CKEG+V  A  L   M+  N  P++ TYN L+ GLC  +   +A  L
Sbjct: 368 PGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLL 427

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              ++D G+ P  VT+N+++D  CK G+++ A  + + M    + P+ FT++ L+DG C 
Sbjct: 428 LRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCK 487

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++ +A  + GSM   G   D+V++  LI+G+CK  + ++   L+  MV      T  T
Sbjct: 488 LGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHT 547

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N     L + +++  A  +  +M +  +     T+   I+G C+ G    ++++   + 
Sbjct: 548 FNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK 607

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  ++  Y  +I+GLC +GR+E A  +  S+    +  +  TY +++      G++D
Sbjct: 608 QAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLD 667

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
           +A  +   M +N   PN  I+  L+ GFV  N
Sbjct: 668 RAFQIVSTMVKNGCQPNSHIYSALLSGFVLSN 699



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 183/382 (47%), Gaps = 22/382 (5%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN  TYN +++GLC+     KA  L  ++    + PD VTYN L+ G C     N A 
Sbjct: 401 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 460

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M   G++P   TF  ++D LCK G++++A+ +L  MV++ +  +  T++ L+DG 
Sbjct: 461 NIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGH 520

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK      LF +M    C     ++N  ++   K+ ++ EA ++  +M+  G+ P+V
Sbjct: 521 CKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSV 580

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+  L  G     +   +LK+ E M++   + +  TY   I+GLC NG + EA  +  +
Sbjct: 581 VTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFS 640

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG------ 305
           +       +   Y  L+    K+GRL+ A ++  ++ +     +   Y+ ++ G      
Sbjct: 641 MSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNT 700

Query: 306 ------LCNDGQMDKAHDLFLDMEENAVAPNVI---------IFVTLIHGFVRINKPSKV 350
                 L + G +D A  L  +  +N    N I         ++  L+ G  +  +  + 
Sbjct: 701 AIGARALSSTGDLD-ARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEA 759

Query: 351 IELLHKMKEKKVMPDASIVSMV 372
            +L   M +  + PD +I S++
Sbjct: 760 DQLTQDMVKHGLFPDKAISSII 781



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 165/357 (46%), Gaps = 36/357 (10%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG------------- 100
           Y++L+  L   N    A  ++  M+++G     + +  +++ LCKNG             
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 221

Query: 101 ----------------------KMDEASRLLDLMV-QRDVRPNAFTYSTLMDGFCLTGKI 137
                                  + EA R+ + M  + + RPN+ TYS L+ G C  G++
Sbjct: 222 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 281

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A +L   M   GC+    +Y +LI   C     ++A+ +  EM +K   P V TY  L
Sbjct: 282 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 341

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
              L    ++E A  +F +M +  +     T+N  I+G CK G++V A +L   +    C
Sbjct: 342 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 401

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           + +I+ YN L++GLC+  +   A  L R +    L+ D VTYNI++ G C +GQ++ A +
Sbjct: 402 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFN 461

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +F  M    + P+   F  LI G  ++ +  +   +L  M +K +  D    + ++D
Sbjct: 462 IFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALID 518



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 171/380 (45%), Gaps = 61/380 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  T+  +IDGLCK G +++A  +   M  + I+ D VT+ +LI G C      +   
Sbjct: 472 EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF 531

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M++     +  TFN  +D L K+ K++EA+ +L  M++  + P+  T++ L++G C
Sbjct: 532 LFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 591

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+   + ++   M+  GC  +  +Y I+ING C N  VEEA ++   M S G+ P   
Sbjct: 592 RAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHF 651

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL---- 248
           TY  L     +  +++ A ++   M ++    ++  Y+  + G   +   + A  L    
Sbjct: 652 TYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTG 711

Query: 249 ---FRTLG------------ILKCELDIQ-AYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
               R+L             I KC +  +  YN L+ GLCK GR+  A +L + + +  L
Sbjct: 712 DLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGL 771

Query: 293 VAD----------------------------------VVTYNIMIHGLCNDGQMDKAHDL 318
             D                                    +Y  +IHGL N+G++ +A  L
Sbjct: 772 FPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKL 831

Query: 319 FLDM-------EENAVAPNV 331
             D+       EE  V P++
Sbjct: 832 VSDLVRHTGIEEEVEVTPSI 851



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 147/347 (42%), Gaps = 75/347 (21%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM---GCKHDDVS 158
           +D   +LL ++V RD+   A     L+   C   + N   +L G+++ M   G +     
Sbjct: 103 LDGRIQLLGVLVSRDLFGVAQKAVVLLIQECEDSE-NGVVKLMGALDGMTELGFRLSYPC 161

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT---------------------L 197
           Y+ L+    K      A  +YR MV++G     + Y T                     L
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 221

Query: 198 FLGL-FEIH-------------QVEHALKLFEEMQRDD-VAADTSTYNTFIDGLCKNGYI 242
            LG   + H              +  A ++FE+M +++    ++ TY+  I GLC+ G +
Sbjct: 222 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 281

Query: 243 VEAVEL------------FRTLGIL---KCEL--------------------DIQAYNCL 267
            EA +L             RT  +L   KC++                    ++  Y  L
Sbjct: 282 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 341

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           ID LC+ G++E A  +FR + +  L   ++T+N +I+G C +G +  A  L   ME+   
Sbjct: 342 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 401

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            PN+  +  L+ G  R++K  K   LL ++ +  ++PD    +++VD
Sbjct: 402 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVD 448



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 5/198 (2%)

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M   G + +   Y+TL + L +++    A  ++  M  +        Y T ++ LCKNG+
Sbjct: 150 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 209

Query: 242 IVEAVELFRTLGILKCELDIQAYNC--LIDGLCKSGRLEIALELFRSLPRRV-LVADVVT 298
            V+A E+F    +L+    +  + C  L+   C+   L  A  +F  + +      + VT
Sbjct: 210 -VQAAEMF-CCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVT 267

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y+I+IHGLC  G++++A  L  +M E    P+   +  LI     I    K +++L +M 
Sbjct: 268 YSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMA 327

Query: 359 EKKVMPDASIVSMVVDLL 376
            K  +P+    ++++D L
Sbjct: 328 TKACVPNVHTYTILIDRL 345


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  197 bits (500), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 183/344 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN+  ++ I+ GLC++G +  A+  F  +   N+ PDV  YN +I G     D  EA RL
Sbjct: 394 PNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRL 453

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           +  + D+ + PS+VTFN ++   CKN K+ EA RLL+ +    + P+A TY+TLM+ +C 
Sbjct: 454 YKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCE 513

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G IN+  EL   M     +   V+Y ++I G CK +++EE++ L  +M +KG+ P  +T
Sbjct: 514 EGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQIT 573

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNT+     +   +  A +L ++M   ++    +TYN  IDGLC+ G + +A  +  +L 
Sbjct: 574 YNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQ 633

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                L   AY  +I   C  G  + A+++F  +  +     +  Y+ +I+ LC    ++
Sbjct: 634 DRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLIN 693

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           +A   F  M  + V+P+  IF  +++ F R      V ELL  M
Sbjct: 694 EAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVM 737



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 199/361 (55%), Gaps = 1/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V++NTI+   CK G  D AK+ F  M    I PD  +YN LIHGL  A    EA  L
Sbjct: 183 PSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALEL 242

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-VRPNAFTYSTLMDGFC 132
             +M  QG+QP +VT+ ++       G M  A  ++  M+  + ++P+  TY+ L+ G C
Sbjct: 243 TNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHC 302

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G I  A  L   + S G + + + Y++L++  CK  +V+EAL L  EM +  ++P +V
Sbjct: 303 QMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLV 362

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L  GL +  +V+ A++L++EM  + +  ++  ++  + GLC+ G + +A   F +L
Sbjct: 363 TYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSL 422

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +     D+  YN +IDG  K G +E A+ L++ L  + +   +VT+N +I+G C + ++
Sbjct: 423 IMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKV 482

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  L   ++ + + P+ + + TL++ +      +K+ ELL +M  K + P     ++V
Sbjct: 483 VEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVV 542

Query: 373 V 373
           +
Sbjct: 543 I 543



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 189/350 (54%), Gaps = 1/350 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T + I+DGLC +     A     Q  G+   P VV++N+++   C     + AK  F  M
Sbjct: 152 TSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMM 211

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +  G+ P   ++N+++  L   G M+EA  L + M ++ ++P+  TY  +  GF L G +
Sbjct: 212 LKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLM 271

Query: 138 NRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           + A E+   M    G K D V+Y +LI G+C+   +EEAL L R+++S G +  V+ Y+ 
Sbjct: 272 SGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSV 331

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L   L +  QV+ AL+L  EM+ +++  D  TY+  I GLCK G + +A++L++ +   +
Sbjct: 332 LLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNR 391

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              +  A++ ++ GLC+ G L  A   F SL    L  DV  YNIMI G    G +++A 
Sbjct: 392 IFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAV 451

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            L+  + + A+ P+++ F +LI+GF +  K  +   LL  +K   + P A
Sbjct: 452 RLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSA 501



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 181/350 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY  +I G C+ G +++A  L   +       +V+ Y+ L+  LC     +EA +
Sbjct: 288 KPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQ 347

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L +EM    +QP +VT+++++  LCK GK+ +A +L   M    + PN+F +S ++ G C
Sbjct: 348 LLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLC 407

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A   F S+     + D   YNI+I+GY K  +VEEA+ LY+ +  K I P++V
Sbjct: 408 EKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIV 467

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N+L  G  +  +V  A +L E ++   +     TY T ++  C+ G I +  EL   +
Sbjct: 468 TFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEM 527

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +   E  +  Y  +I GLCK  +LE +++L   +  + L  D +TYN +I   C    M
Sbjct: 528 NLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDM 587

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
            KA +L  DM  + + P    +  LI G  R         +L  ++++ +
Sbjct: 588 RKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNI 637



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 171/346 (49%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N + Y+ ++  LCK G VD+A  L  +M+  N+ PD+VTY+ LIHGLC      +A +L+
Sbjct: 325 NVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLY 384

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM    + P+    + I+  LC+ G + +A    D ++  ++RP+   Y+ ++DG+   
Sbjct: 385 KEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKL 444

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +  A  L+  +         V++N LI G+CKN++V EA  L   +   G++P+ VTY
Sbjct: 445 GDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTY 504

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            TL     E   +    +L  EM   D+     TY   I GLCK   + E+V+L   +  
Sbjct: 505 TTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRA 564

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D   YN +I   CK+  +  A EL   +    L     TYN++I GLC  G ++ 
Sbjct: 565 KGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVED 624

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           A  + + +++  +    + + T+I          + +++ H+M EK
Sbjct: 625 ADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEK 670



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 184/362 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTY+ +I GLCK+G V +A  L+ +M    I P+   ++ ++ GLC     ++A+ 
Sbjct: 358 QPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARM 417

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F  ++   ++P V  +N+++D   K G ++EA RL   +  + + P+  T+++L+ GFC
Sbjct: 418 YFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFC 477

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K+  A  L  S++  G +   V+Y  L+N YC+   + +   L  EM  K I+PTVV
Sbjct: 478 KNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVV 537

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  +  GL +  ++E +++L E+M+   +A D  TYNT I   CK   + +A EL   +
Sbjct: 538 TYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDM 597

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            I   E     YN LIDGLC+ G +E A  +  SL  R +    V Y  MI   C  G  
Sbjct: 598 LIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDA 657

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  +F  M E     ++  +  +I+   +    ++       M    V PD  I  M+
Sbjct: 658 QRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMM 717

Query: 373 VD 374
           ++
Sbjct: 718 LN 719



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 178/345 (51%), Gaps = 6/345 (1%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND-WNEAKRLFFEMMDQGVQPSVVTFN 90
           V  A  + ++MK +N+ P + TYNSL++ L H +  W+    ++ ++ D G   S  T +
Sbjct: 99  VHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWD----VYNDIKDSGTPQSARTSS 154

Query: 91  VIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
           +I+D LC   +  +A   L     ++  P+  +++T+M  +C  G  + A+  F  M   
Sbjct: 155 IIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKY 214

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           G   D  SYNILI+G      +EEAL L  +M  +G++P +VTY  +  G   +  +  A
Sbjct: 215 GILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGA 274

Query: 211 LKLFEEMQRDD-VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
            ++ ++M  D+ +  D  TY   I G C+ G I EA+ L R L     +L++  Y+ L+ 
Sbjct: 275 REIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLS 334

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
            LCK G+++ AL+L   +    L  D+VTY+I+IHGLC  G++ +A  L+ +M  N + P
Sbjct: 335 SLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFP 394

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           N      ++ G       S        +    + PD ++ ++++D
Sbjct: 395 NSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMID 439



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 122/237 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTY T+++  C+EG ++K   L L+M  ++I P VVTY  +I GLC      E+ +
Sbjct: 498 EPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQ 557

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M  +G+ P  +T+N I+   CK   M +A  LLD M+  ++ P   TY+ L+DG C
Sbjct: 558 LLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLC 617

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A+ +  S++        V+Y  +I  +C   + + A+ ++ +MV KG + ++ 
Sbjct: 618 RYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIK 677

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            Y+ +   L +   +  A   F  M  D V+ D   +   ++   + G++    EL 
Sbjct: 678 DYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELL 734



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 75/143 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P   TYN +IDGLC+ G V+ A  + + ++  NIN   V Y ++I   C   D   A +
Sbjct: 603 EPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVK 662

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +M+++G + S+  ++ +++ LCK   ++EA     +M+   V P+   +  +++ F 
Sbjct: 663 VFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFH 722

Query: 133 LTGKINRAEELFGSMESMGCKHD 155
             G ++   EL   M   G  HD
Sbjct: 723 RAGHVHSVFELLAVMIKFGLLHD 745



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 79/174 (45%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +TYNTII   CK   + KA  L   M   N+ P   TYN LI GLC   D  +A R+
Sbjct: 569 PDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRV 628

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              + D+ +  + V +  ++   C  G    A ++   MV++    +   YS +++  C 
Sbjct: 629 LVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCK 688

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
              IN A+  F  M S G   D   + +++N + +   V     L   M+  G+
Sbjct: 689 RCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGL 742



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 104/206 (50%), Gaps = 4/206 (1%)

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
           ++ V +AL +  +M  + ++P++ TYN+L   L+ +   +    ++ +++         T
Sbjct: 96  SRMVHDALFVLVKMKEQNLRPSIQTYNSL---LYNLRHTDIMWDVYNDIKDSGTPQSART 152

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
            +  +DGLC      +AV   R     +    + ++N ++   CK G  ++A   F  + 
Sbjct: 153 SSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMML 212

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
           +  ++ D  +YNI+IHGL   G M++A +L  DME+  + P+++ +  +  GF  +   S
Sbjct: 213 KYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMS 272

Query: 349 KVIELLHKM-KEKKVMPDASIVSMVV 373
              E++ KM  ++ + PD    ++++
Sbjct: 273 GAREIIQKMLTDEGLKPDLVTYTVLI 298


>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 780

 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 184/392 (46%), Gaps = 39/392 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T+  ++DGL K+G    A+ +F  M G  I+P+ VTY  LI GLC      +A+
Sbjct: 194 CSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDAR 253

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +LF+EM   G  P  V  N ++D  CK G+M EA  LL L  +         YS+L+DG 
Sbjct: 254 KLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGL 313

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +  +A EL+ +M     K D + Y ILI G  K  ++E+AL L R M SKGI P  
Sbjct: 314 FRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDT 373

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             YN +   L     +E    L  EM   +   D  T+   I  +C+NG + +A E+F  
Sbjct: 374 YCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLE 433

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL----PRRVLV-------------- 293
           +    C   +  +N LIDGLCKSG L+ A  L   +    P  + +              
Sbjct: 434 IEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMV 493

Query: 294 ---------------------ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
                                 D+V+YN++I+G C +G +D A  L   ++   ++P+ +
Sbjct: 494 QSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSV 553

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            + TLI+G  R+ +  +  +L +   + +  P
Sbjct: 554 TYNTLINGLHRVGREEEAFKLFYAKDDFRHSP 585



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 173/345 (50%), Gaps = 1/345 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE-AKRL 73
           ++  +  +I    K G  +KA   F +MK  +  PDV TYN ++  +   + +   A  +
Sbjct: 126 DSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMREDVFFMLAFAV 185

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + EM+     P++ TF ++MD L K G+  +A ++ D M  R + PN  TY+ L+ G C 
Sbjct: 186 YNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQ 245

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G    A +LF  M++ G   D V++N L++G+CK   + EA  L R     G    +  
Sbjct: 246 RGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRG 305

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y++L  GLF   +   A +L+  M + ++  D   Y   I GL K G I +A++L R++ 
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMP 365

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D   YN +I  LC  G LE    L   +       D  T+ I+I  +C +G + 
Sbjct: 366 SKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           KA ++FL++E++  +P+V  F  LI G  +  +  +   LLHKM+
Sbjct: 426 KAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME 470



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 161/347 (46%), Gaps = 44/347 (12%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T  YN +I  LC  G +++ ++L L+M      PD  T+  LI  +C      +A+ +
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEI 430

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN------AFTYSTL 127
           F E+   G  PSV TFN ++D LCK+G++ EA  LL  M     RP       A + +  
Sbjct: 431 FLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM--EVGRPASLFLRLAHSGNRS 488

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
            D    +G I +A +        G   D VSYN+LING+C+  +++ AL L   +  KG+
Sbjct: 489 FDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGL 548

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P  VTYNTL  GL  + + E A KLF    +DD     + Y + +   C+   ++ A  
Sbjct: 549 SPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRRRKLLVAFN 606

Query: 248 LF-RTLGILKC---------------------------------ELDIQAYNCLIDGLCK 273
           L+ + L  + C                                 EL +  Y   + GLC+
Sbjct: 607 LWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQ 666

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           SGR   AL +F  L  + ++    +   +IHGLC   Q+D A D+FL
Sbjct: 667 SGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIDVFL 713



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 168/358 (46%), Gaps = 1/358 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++  +ID L ++   D       ++K   ++ D   +  LI          +A   F  M
Sbjct: 94  SFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRM 153

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDE-ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
            +   +P V T+NVI+  + +       A  + + M++ +  PN +T+  LMDG    G+
Sbjct: 154 KEFDCRPDVFTYNVILRIMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGR 213

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
            + A+++F  M   G   + V+Y ILI+G C+    E+A  L+ EM + G  P  V +N 
Sbjct: 214 TSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNA 273

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G  ++ ++  A +L    ++D        Y++ IDGL +     +A EL+  +    
Sbjct: 274 LLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRN 333

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            + DI  Y  LI GL K+G++E AL+L RS+P + +  D   YN +I  LC  G +++  
Sbjct: 334 IKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGR 393

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            L L+M E    P+      LI    R     K  E+  ++++    P  +  + ++D
Sbjct: 394 SLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALID 451



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 141/290 (48%), Gaps = 1/290 (0%)

Query: 88  TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
           +F +++D L ++   D   + L+ +    V  +++ +  L+  +   G   +A E FG M
Sbjct: 94  SFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRM 153

Query: 148 ESMGCKHDDVSYNILINGYCKNKEV-EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           +   C+ D  +YN+++    +       A ++Y EM+     P + T+  L  GL++  +
Sbjct: 154 KEFDCRPDVFTYNVILRIMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGR 213

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
              A K+F++M    ++ +  TY   I GLC+ G   +A +LF  +       D  A+N 
Sbjct: 214 TSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNA 273

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           L+DG CK GR+  A EL R   +   V  +  Y+ +I GL    +  +A +L+ +M +  
Sbjct: 274 LLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRN 333

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + P++I++  LI G  +  K    ++LL  M  K + PD    + V+  L
Sbjct: 334 IKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKAL 383



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 110/248 (44%), Gaps = 37/248 (14%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALF--LQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           P+ V+YN +I+G C+EG +D A  L   LQ+KG  ++PD VTYN+LI+GL       EA 
Sbjct: 515 PDIVSYNVLINGFCREGDIDGALKLLNVLQLKG--LSPDSVTYNTLINGLHRVGREEEAF 572

Query: 72  RLFFEMMDQGVQPSV---------------VTFNVIMDELCKNGKMD------------- 103
           +LF+   D    P+V               V FN+ M  L K   +D             
Sbjct: 573 KLFYAKDDFRHSPAVYRSLMTWSCRRRKLLVAFNLWMKYLKKISCLDDETANEIEQCFKE 632

Query: 104 -EASRLLDLMVQRDVRPNAFT---YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
            E  R L  +++ D R +  T   Y+  + G C +G+ + A  +F  +          S 
Sbjct: 633 GETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSC 692

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ-VEHALKLFEEMQ 218
             LI+G CK ++++ A+ ++   +    K      N L   L +  + +E   +L   M+
Sbjct: 693 VKLIHGLCKREQLDAAIDVFLYTLDNNFKLMPRVCNYLLSSLLQSREKMEIVSQLTNRME 752

Query: 219 RDDVAADT 226
           R     D+
Sbjct: 753 RAGYDVDS 760


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 178/330 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   +N ++ G CK G V  A+ +F ++    + P VV++N+LI G C + +  E   L
Sbjct: 224 PNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVL 283

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  + + P V T++ +++ LCK  +++EA+ L D M +  + PN  T++TL+DG C 
Sbjct: 284 KSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCK 343

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GKI+ A   F  M+  G + D ++YN LING C++ +++EA  L  EM+  G KP  +T
Sbjct: 344 HGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKIT 403

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           + TL  G  +   ++ AL++ + M  + +  D   +   I GLC++G + +A  + + + 
Sbjct: 404 FTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDML 463

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D   Y  +ID  CK G +++  +L + + R   V  VVTYN +++G C  GQM 
Sbjct: 464 SAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMK 523

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            A  L   M    V PN I F  L+ G  +
Sbjct: 524 NAKMLLHAMLNMEVVPNDITFNILLDGHCK 553



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 180/334 (53%), Gaps = 3/334 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V++NT+I G C+   V++   L   M+ E I+PDV TY++LI+GLC  +   EA  
Sbjct: 258 RPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANG 317

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM + G+ P+ VTF  ++D  CK+GK+D A R  ++M  R +RP+  TY+ L++G C
Sbjct: 318 LFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLC 377

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A +L   M   G K D +++  L++G CK+ +++ AL +   MV +GI+   V
Sbjct: 378 RDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDV 437

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            +  L  GL    +V  A ++ ++M       D  TY   ID  CK G +    +L + +
Sbjct: 438 AFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEM 497

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   +  YN L++G CK G+++ A  L  ++    +V + +T+NI++ G C  G  
Sbjct: 498 QRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGS- 556

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
             + D  +   E  +  +   +  L++  ++I+K
Sbjct: 557 --SVDFKIFNGEKGLVSDYASYTALVNESIKISK 588



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 176/337 (52%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
            +L++      P+V  +N L+HG C   D   A+ +F E+  +G++PSVV+FN ++   C
Sbjct: 213 FYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYC 272

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           ++  ++E   L  +M    + P+ FTYS L++G C   ++  A  LF  M  MG   + V
Sbjct: 273 RSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGV 332

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           ++  LI+G CK+ +++ AL  +  M  +GI+P ++TYN L  GL     ++ A KL  EM
Sbjct: 333 TFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEM 392

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
             +    D  T+ T +DG CK+G +  A+E+   +     ELD  A+  LI GLC+ GR+
Sbjct: 393 IGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRV 452

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A  + + +       D  TY ++I   C  G +     L  +M+ +   P V+ +  L
Sbjct: 453 RDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNAL 512

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           ++GF +  +      LLH M   +V+P+    ++++D
Sbjct: 513 MNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLD 549



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 93/238 (39%), Positives = 137/238 (57%), Gaps = 2/238 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+G+V  PN VT+ T+IDG CK G +D A   F  MK   I PD++TYN+LI+GLC   D
Sbjct: 324 EMGLV--PNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGD 381

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             EA++L  EM+  G +P  +TF  +MD  CK+G MD A  + D MV+  +  +   ++ 
Sbjct: 382 LKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTA 441

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ G C  G++  AE +   M S G K DD +Y ++I+ +CK  +V+    L +EM   G
Sbjct: 442 LISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDG 501

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
             P VVTYN L  G  +  Q+++A  L   M   +V  +  T+N  +DG CK+G  V+
Sbjct: 502 RVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVD 559



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 100/166 (60%), Gaps = 2/166 (1%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N  IG   KP+ +T+ T++DG CK+G +D A  +  +M  E I  D V + +LI GLC  
Sbjct: 390 NEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRD 449

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR-PNAFT 123
               +A+R+  +M+  G +P   T+ +++D  CK G +   ++LL  M QRD R P   T
Sbjct: 450 GRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEM-QRDGRVPGVVT 508

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
           Y+ LM+GFC  G++  A+ L  +M +M    +D+++NIL++G+CK+
Sbjct: 509 YNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKH 554



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 101/206 (49%)

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
           N++       Y E++  G  P V  +N L  G  +I  V +A  +F+E+ R  +     +
Sbjct: 204 NQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVS 263

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           +NT I G C++  + E   L   +   +   D+  Y+ LI+GLCK  R+E A  LF  + 
Sbjct: 264 FNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMC 323

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
              LV + VT+  +I G C  G++D A   F  M++  + P++I +  LI+G  R     
Sbjct: 324 EMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLK 383

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVD 374
           +  +LL++M      PD    + ++D
Sbjct: 384 EARKLLNEMIGNGFKPDKITFTTLMD 409


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 185/389 (47%), Gaps = 35/389 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDK-----------------------------------AK 36
           C+PNTVTY+T+I+GLC  G V++                                   A 
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340

Query: 37  ALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
            LF+ MK +   P+V TY +LI GLC +     A  LF  M   GV P+ VT+N +++ L
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINIL 400

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
            +N ++  A  +L+LM +    PN  TY+ ++ G+C+ G   +A  +  +M   G   + 
Sbjct: 401 VENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANL 460

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           V+YN +I GYC +     AL +   M   G KP   +Y  L  G  +I ++E A  LF E
Sbjct: 461 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNE 520

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M  D +  +  TY   IDG CK+  +  A  L   +    C  ++Q YN LI GL K   
Sbjct: 521 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 580

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
              A EL + +    +  +VVTY  MI GLC +G    A ++F  M E    PN++ + +
Sbjct: 581 FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSS 640

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LI    +  K  +   L  +++   ++PD
Sbjct: 641 LIRALGQEGKVEEAENLFAELERHGLIPD 669



 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 183/364 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+T TY ++I G C++  +D A  +F QM  E   P+ VTY++LI+GLC +   NEA  
Sbjct: 247 SPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD 306

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+  G+ P+  T    +  LC  G  ++A RL   M  +   PN +TY+ L+ G C
Sbjct: 307 LIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLC 366

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           ++G +  A  LF  M   G   + V+YN LIN   +N+ ++ A  +   M   G  P +V
Sbjct: 367 VSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIV 426

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN +  G   +   + A+ +   M +   +A+  TYNT I G C +G    A+ +   +
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C+ D  +Y  LI G CK  ++E A  LF  +    L  + VTY  +I G C D ++
Sbjct: 487 RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  L   M+ +   PNV  +  LIHG  + N  S   EL   M E+ + P+    + +
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 606

Query: 373 VDLL 376
           +D L
Sbjct: 607 IDGL 610



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/328 (33%), Positives = 170/328 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNTVTYN +I+ L +   +  A  +   M     +P++VTYN +I G C   D  +A  +
Sbjct: 388 PNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLV 447

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+ +G   ++VT+N I+   C +G    A R+LDLM     +P+ ++Y+ L+ GFC 
Sbjct: 448 MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 507

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+  A  LF  M   G   ++V+Y  LI+GYCK+++++ A SL   M   G +P V T
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  GL + +    A +L + M  + +  +  TY   IDGLCKNG    A+E+F  + 
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  ++  Y+ LI  L + G++E A  LF  L R  L+ D +TY  MI      G+++
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 687

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            A +    M +    P +  +  LI G 
Sbjct: 688 HAFNFLGRMIKAGCQPTLWTYGVLIKGL 715



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 179/384 (46%), Gaps = 24/384 (6%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY  +IDG CK+  +D A +L   MK     P+V TYN LIHGL   N+++ A+ L
Sbjct: 528 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 587

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+++G+ P+VVT+  ++D LCKNG    A  + + M+++   PN  TYS+L+     
Sbjct: 588 CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 647

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  AE LF  +E  G   D+++Y  +I  Y  + +VE A +    M+  G +PT+ T
Sbjct: 648 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 707

Query: 194 YNTLFLGL------------------------FEIHQVEHALKLFEEMQRDDVAADTSTY 229
           Y  L  GL                        ++    +    +  ++   D        
Sbjct: 708 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           N  +  L   G   EA EL  ++       D +AYN L+  L +   +++A+ +F+ +  
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
           +     +  Y  +I  LC   +  +A   F +M      P+ ++   LI G +R      
Sbjct: 828 QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDL 887

Query: 350 VIELLHKMKEKKVMPDASIVSMVV 373
            +E LH M+ ++ MP   I +++ 
Sbjct: 888 CMEFLHIMETRRYMPSFHIYTILA 911



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 150/301 (49%), Gaps = 6/301 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VTYN +I G C  G   KA  +   M     + ++VTYN++I G C + +   A 
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R+   M D G +P   ++  ++   CK  KM+ A  L + MV   + PN  TY+ L+DG+
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++ A  L   M+  GC+ +  +YN+LI+G  K      A  L + M+ +GI P V
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY  +  GL +      AL++F +M       +  TY++ I  L + G + EA  LF  
Sbjct: 601 VTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE 660

Query: 252 L---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           L   G++  E+    Y  +I+    SG++E A      + +      + TY ++I GL N
Sbjct: 661 LERHGLIPDEI---TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN 717

Query: 309 D 309
           +
Sbjct: 718 E 718



 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 144/300 (48%), Gaps = 1/300 (0%)

Query: 62  CHANDWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           CH+ +       F +M+ Q G++  +  ++ ++  L + G           M+   V+PN
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
              Y+ +++  C  G +  AE +   +       D  +Y  +I G+C+  +++ AL ++ 
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           +M  +G +P  VTY+TL  GL +  +V  A  L  EM    +     T    I  LC  G
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
              +A  LF  +    CE ++  Y  LI GLC SG L++A+ LF  + R  +  + VTYN
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +I+ L  + ++  A  +   M  N  +PN++ +  +I G+  +  P K + +++ M ++
Sbjct: 395 ALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 98/198 (49%)

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
           Y  M+S+G++P ++ YN +   L +   V  A  + +++   +++ DT TY + I G C+
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 262

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
              +  A+++F  +    CE +   Y+ LI+GLC SGR+  A +L R +    ++    T
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
               I  LC+ G  + A  LF+DM+     PNV  +  LI G          I L H+M 
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMS 382

Query: 359 EKKVMPDASIVSMVVDLL 376
              V P+    + ++++L
Sbjct: 383 RDGVFPNTVTYNALINIL 400


>gi|302763305|ref|XP_002965074.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
 gi|300167307|gb|EFJ33912.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
          Length = 484

 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 189/350 (54%), Gaps = 4/350 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   YN ++ G C  G V +A   F +M G+   P+V TYN++I+GLC     + A  L
Sbjct: 112 PDVTAYNVVLKGYCDLGRVGRALIKFGKM-GKTCKPNVATYNTVINGLCKFGKIDWAVHL 170

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  +    V P   T++ ++  LC+  +++ A ++ D+M++ +   +A  Y+ + DGFC 
Sbjct: 171 FTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCK 230

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK-EVEEALSLYREMVSKGIKPTVV 192
             +++ A E+  +M    CK   V+YN +ING C+ K  +EEA  L+++MV     P  V
Sbjct: 231 ERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAV 290

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY T+ LGL +I++V+  L+LF+ M +  ++ D   Y++ I    K   + EA  + +  
Sbjct: 291 TYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDA 350

Query: 253 GILKCELDIQAYNCLIDGLCKS--GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
                  D+  Y  LI G C++   R++ AL LF+++  R +  +V+TYNI++ GLC  G
Sbjct: 351 ARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTG 410

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           + D+A+ +F +M +   +PN + F  +  G +   K  K   +   M  K
Sbjct: 411 RFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCRKTDKFERIFMDMVYK 460



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 174/320 (54%), Gaps = 3/320 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G++G  CKPN  TYNT+I+GLCK G +D A  LF ++  + ++PD  TY++L+HGLC A 
Sbjct: 138 GKMGKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAE 197

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
               A +++  M++         +N + D  CK  ++DEA  +L  M+QR  +P+  TY+
Sbjct: 198 RLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYN 257

Query: 126 TLMDGFC-LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
            +++G C    +I  A  LF  M    C  + V+Y  +I G  K  EV+  L L++ M  
Sbjct: 258 CIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSK 317

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC--KNGYI 242
            G+ P    Y++L     ++ +++ A  + ++  R+ V  D   Y T I G C  +   +
Sbjct: 318 AGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRV 377

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            EA+ LF+ +   +   ++  YN ++ GLCK+GR + A ++F+ + +     + +T+ +M
Sbjct: 378 DEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVM 437

Query: 303 IHGLCNDGQMDKAHDLFLDM 322
             G+ +  + DK   +F+DM
Sbjct: 438 TMGMIHCRKTDKFERIFMDM 457



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 169/342 (49%), Gaps = 3/342 (0%)

Query: 35  AKALF-LQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIM 93
           A+  F    K E    DV  Y  L+H L  A    EA R F   +    +PS+ +F +I+
Sbjct: 27  ARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIII 86

Query: 94  DELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCK 153
              C       A R L  M    + P+   Y+ ++ G+C  G++ RA   FG M    CK
Sbjct: 87  QCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT-CK 145

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            +  +YN +ING CK  +++ A+ L+  +    + P   TY+TL  GL +  ++E A+K+
Sbjct: 146 PNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKV 205

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
           ++ M   +   D   YN   DG CK   + EA+E+ +T+   +C+  +  YNC+I+G+C+
Sbjct: 206 YDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQ 265

Query: 274 -SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
              R+E A  LF+ +       + VTY  MI GL    ++ +  +LF  M +  ++P+  
Sbjct: 266 YKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGY 325

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            + +LI+ FV++ K  +   +L       V PD  + + ++ 
Sbjct: 326 AYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLIS 367



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 2/181 (1%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G  C PN VTY T+I GL K   V +   LF  M    ++PD   Y+SLI+        
Sbjct: 281 VGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKL 340

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK--MDEASRLLDLMVQRDVRPNAFTYS 125
           +EAK +  +     V P V  +  ++   C+  K  +DEA  L   M  R V PN  TY+
Sbjct: 341 DEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYN 400

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            ++ G C TG+ + A ++F  M  + C  + +++ ++  G    ++ ++   ++ +MV K
Sbjct: 401 IVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCRKTDKFERIFMDMVYK 460

Query: 186 G 186
           G
Sbjct: 461 G 461


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 196/365 (53%), Gaps = 1/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V++N+I+  L K+  VD+A +LF  MK ++  P+  TYN +I  LC      EA 
Sbjct: 350 CIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAY 408

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R+  EM    + P+++T N+++D LCK  K++EA ++ +   QR   P+  TY +L+DG 
Sbjct: 409 RILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGL 468

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+++ A  LF  M   G   + V Y  LI  +  +   E+   +++E++ +G KP +
Sbjct: 469 GKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDL 528

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
              NT    +F+  +VE    +FE+++      D  +Y+  I GL K G   E   +F  
Sbjct: 529 TLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHA 588

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +      LD +AYN ++DG CKSG++  A E+   +  + +   V TY  ++ GL    +
Sbjct: 589 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 648

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A+ LF + +   +  NV+++ +LI GF ++ +  +   +L +M +K + P+    + 
Sbjct: 649 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 708

Query: 372 VVDLL 376
           ++D L
Sbjct: 709 LLDAL 713



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 191/365 (52%), Gaps = 4/365 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVTYNSLIHGLCHANDWNE 69
           C P+ VTY ++IDGL K+G VD+A  LF +M   G N NP  V Y SLI          +
Sbjct: 454 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP--VVYTSLIRNFFIHGRKED 511

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
             ++F E++ +G +P +   N  MD + K G++++   + + +      P+  +YS L+ 
Sbjct: 512 GHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIH 571

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G    G+      +F +M+  G   D  +YN +++G+CK+ +V +A  +  EM  K ++P
Sbjct: 572 GLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQP 631

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           TV TY  +  GL +I +++ A  LFEE +   +  +   Y++ IDG  K G I EA  + 
Sbjct: 632 TVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLIL 691

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +       ++  +N L+D L K+  +  AL  F+S+       +  TY+I+I+GLC  
Sbjct: 692 EEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRV 751

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
            + +KA   + DM++  + PNV+ + T+I G  ++   +    L  + K    +PDA+  
Sbjct: 752 QKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASF 811

Query: 370 SMVVD 374
           + +++
Sbjct: 812 NALIE 816



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 196/403 (48%), Gaps = 36/403 (8%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G   +P+ V YN  ID   K G VD A   F ++K + + PD V+Y S+I  LC A    
Sbjct: 242 GSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLG 301

Query: 69  EAKRLFFEM-----------------------------------MDQGVQPSVVTFNVIM 93
           EA+ LF +M                                    ++G  PSVV+FN I+
Sbjct: 302 EAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSIL 361

Query: 94  DELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCK 153
             L K  K+DEA  L ++M ++D  PN+ TY+ ++D  CL G++  A  +   ME     
Sbjct: 362 TCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLF 420

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            + ++ NI+++  CK +++EEA  ++     +G  P  VTY +L  GL +  QV+ A +L
Sbjct: 421 PNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRL 480

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
           FE+M      A+   Y + I     +G   +  ++F+ L    C+ D+   N  +D + K
Sbjct: 481 FEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFK 540

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           +G +E    +F  +     + DV +Y+I+IHGL   GQ  +  ++F  M++   A +   
Sbjct: 541 AGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARA 600

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +  ++ GF +  K  K  E+L +MKEK V P  +    +VD L
Sbjct: 601 YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 643



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 187/364 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN+ TYN IID LC  G V++A  +  +M+  ++ P+++T N ++  LC A    EA +
Sbjct: 385 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYK 444

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F     +G  P  VT+  ++D L K G++DEA RL + M+      N   Y++L+  F 
Sbjct: 445 IFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFF 504

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + G+     ++F  +   GCK D    N  ++   K  EVE+   ++ ++ S G  P V 
Sbjct: 505 IHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVR 564

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y+ L  GL +  Q      +F  M++   A D   YN  +DG CK+G + +A E+   +
Sbjct: 565 SYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM 624

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +  +  Y  ++DGL K  RL+ A  LF     + +  +VV Y+ +I G    G++
Sbjct: 625 KEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRI 684

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A+ +  +M +  + PNV  + +L+   V+  + ++ +     MKE K  P+    S++
Sbjct: 685 DEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSIL 744

Query: 373 VDLL 376
           ++ L
Sbjct: 745 INGL 748



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 152/263 (57%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
            YN ++DG CK G V KA  +  +MK + + P V TY +++ GL   +  +EA  LF E 
Sbjct: 600 AYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEA 659

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
             +G++ +VV ++ ++D   K G++DEA  +L+ M+++ + PN +T+++L+D      +I
Sbjct: 660 KSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEI 719

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           N A   F SM+ M C  +  +Y+ILING C+ ++  +A   +++M  +G+ P VVTY T+
Sbjct: 720 NEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTM 779

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL ++  +  A  LFE  + +    D +++N  I+G+      +EA ++F    +  C
Sbjct: 780 ISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGC 839

Query: 258 ELDIQAYNCLIDGLCKSGRLEIA 280
            ++I++   L+D L KS  LE A
Sbjct: 840 RINIKSCISLLDALNKSECLEQA 862



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 180/362 (49%), Gaps = 16/362 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+    NT +D + K G V+K + +F  ++     PDV +Y+ LIHGL  A    E  
Sbjct: 524 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETS 583

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M  QG       +N ++D  CK+GK+ +A  +L+ M ++ V+P   TY  ++DG 
Sbjct: 584 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 643

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +++ A  LF   +S G + + V Y+ LI+G+ K   ++EA  +  EM+ KG+ P V
Sbjct: 644 AKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 703

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+N+L   L +  ++  AL  F+ M+      +T TY+  I+GLC+     +A   ++ 
Sbjct: 704 YTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQD 763

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       ++  Y  +I GL K G +  A  LF        + D  ++N +I G+ N  +
Sbjct: 764 MQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANR 823

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
             +A+ +F   EE           T + G  RIN  S  I LL  + + + +  A+IV  
Sbjct: 824 AMEAYQVF---EE-----------TRLRG-CRINIKS-CISLLDALNKSECLEQAAIVGA 867

Query: 372 VV 373
           V+
Sbjct: 868 VL 869



 Score =  160 bits (405), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 179/362 (49%), Gaps = 1/362 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P    Y  +I  L +    ++A  L  QM+       V  + +L+  L       +A  
Sbjct: 176 RPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALA 235

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  E+    ++P +V +NV +D   K G +D A +    +  + ++P+  +Y++++   C
Sbjct: 236 LVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLC 295

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  AEELF  ME+        +YN +I GY      E+A  L   +  +G  P+VV
Sbjct: 296 KAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVV 355

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           ++N++   L +  +V+ AL LFE M++ D   ++STYN  ID LC  G + EA  +   +
Sbjct: 356 SFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEM 414

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++   N ++D LCK+ +LE A ++F S  +R    D VTY  +I GL   GQ+
Sbjct: 415 EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQV 474

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A+ LF  M +     N +++ +LI  F    +     ++  ++  +   PD ++++  
Sbjct: 475 DEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTY 534

Query: 373 VD 374
           +D
Sbjct: 535 MD 536



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 133/285 (46%), Gaps = 9/285 (3%)

Query: 96  LCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHD 155
           L +  ++D+A   + +M +   RP    Y+ L+       +  RA EL   M+ +G +  
Sbjct: 154 LVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVG 213

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
              +  L+    +  +V +AL+L  E+    ++P +V YN       +   V+ A K F 
Sbjct: 214 VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFH 273

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
           E++   +  D  +Y + I  LCK G + EA ELF  +   +      AYN +I G   +G
Sbjct: 274 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 333

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF----LDMEENAVAPNV 331
           R E A +L   L  R  +  VV++N ++  L    ++D+A  LF     D E N+   N+
Sbjct: 334 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNI 393

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           II +  + G V      +   +L +M+   + P+   V+++VD L
Sbjct: 394 IIDMLCLGGRV-----EEAYRILDEMEHASLFPNLLTVNIMVDRL 433



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 74/170 (43%)

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L   L    +++ A+     M+R       S Y   I  L +      A+EL R +  + 
Sbjct: 150 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 209

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            E+ +  +  L+  L + G++  AL L   +    L  D+V YN+ I      G +D A 
Sbjct: 210 YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 269

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             F +++   + P+ + + ++I    +  +  +  EL  +M+ ++ +P A
Sbjct: 270 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCA 319


>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
 gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
           salt-inducible-like protein from Arabidopsis thaliana
           BAC gb|AL021637 [Arabidopsis thaliana]
 gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 780

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 183/392 (46%), Gaps = 39/392 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T+  ++DGL K+G    A+ +F  M G  I+P+ VTY  LI GLC     ++A+
Sbjct: 194 CSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDAR 253

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +LF+EM   G  P  V  N ++D  CK G+M EA  LL L  +         YS+L+DG 
Sbjct: 254 KLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGL 313

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +  +A EL+ +M     K D + Y ILI G  K  ++E+AL L   M SKGI P  
Sbjct: 314 FRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDT 373

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             YN +   L     +E    L  EM   +   D  T+   I  +C+NG + EA E+F  
Sbjct: 374 YCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTE 433

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIA------------------------------- 280
           +    C   +  +N LIDGLCKSG L+ A                               
Sbjct: 434 IEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMV 493

Query: 281 -----LELFRSLPRRVLVA---DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
                L+ +R L          D+V+YN++I+G C  G +D A  L   ++   ++P+ +
Sbjct: 494 ESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSV 553

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            + TLI+G  R+ +  +  +L +   + +  P
Sbjct: 554 TYNTLINGLHRVGREEEAFKLFYAKDDFRHSP 585



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 171/345 (49%), Gaps = 1/345 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE-AKRL 73
           ++  +  +I    K G  +KA   F +MK  +  PDV TYN ++  +     +   A  +
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAV 185

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + EM+     P++ TF ++MD L K G+  +A ++ D M  R + PN  TY+ L+ G C 
Sbjct: 186 YNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQ 245

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  + A +LF  M++ G   D V++N L++G+CK   + EA  L R     G    +  
Sbjct: 246 RGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRG 305

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y++L  GLF   +   A +L+  M + ++  D   Y   I GL K G I +A++L  ++ 
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D   YN +I  LC  G LE    L   +       D  T+ I+I  +C +G + 
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           +A ++F ++E++  +P+V  F  LI G  +  +  +   LLHKM+
Sbjct: 426 EAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME 470



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 160/347 (46%), Gaps = 44/347 (12%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T  YN +I  LC  G +++ ++L L+M      PD  T+  LI  +C      EA+ +
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEI 430

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF------TYSTL 127
           F E+   G  PSV TFN ++D LCK+G++ EA  LL  M     RP +       + +  
Sbjct: 431 FTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM--EVGRPASLFLRLSHSGNRS 488

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
            D    +G I +A          G   D VSYN+LING+C+  +++ AL L   +  KG+
Sbjct: 489 FDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGL 548

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P  VTYNTL  GL  + + E A KLF    +DD     + Y + +   C+   ++ A  
Sbjct: 549 SPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFN 606

Query: 248 LF-RTLGILKC---------------------------------ELDIQAYNCLIDGLCK 273
           L+ + L  + C                                 EL +  Y   + GLC+
Sbjct: 607 LWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQ 666

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           SGR   AL +F  L  + ++    +   +IHGLC   Q+D A ++FL
Sbjct: 667 SGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFL 713



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 166/357 (46%), Gaps = 1/357 (0%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           +  +ID L ++   D       ++K   ++ D   +  LI          +A   F  M 
Sbjct: 95  FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDE-ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +   +P V T+NVI+  + +       A  + + M++ +  PN +T+  LMDG    G+ 
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A+++F  M   G   + V+Y ILI+G C+    ++A  L+ EM + G  P  V +N L
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G  ++ ++  A +L    ++D        Y++ IDGL +     +A EL+  +     
Sbjct: 275 LDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNI 334

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           + DI  Y  LI GL K+G++E AL+L  S+P + +  D   YN +I  LC  G +++   
Sbjct: 335 KPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRS 394

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           L L+M E    P+      LI    R     +  E+  ++++    P  +  + ++D
Sbjct: 395 LQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALID 451



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 142/293 (48%), Gaps = 9/293 (3%)

Query: 89  FNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSME 148
           F +++D L ++   D   + L+ +    V  +++ +  L+  +   G   +A E FG M+
Sbjct: 95  FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154

Query: 149 SMGCKHDDVSYNILINGYCKNKEVEE-----ALSLYREMVSKGIKPTVVTYNTLFLGLFE 203
              C+ D  +YN+++    +    EE     A ++Y EM+     P + T+  L  GL++
Sbjct: 155 EFDCRPDVFTYNVILRVMMR----EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210

Query: 204 IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQA 263
             +   A K+F++M    ++ +  TY   I GLC+ G   +A +LF  +       D  A
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
           +N L+DG CK GR+  A EL R   +   V  +  Y+ +I GL    +  +A +L+ +M 
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +  + P++I++  LI G  +  K    ++LL  M  K + PD    + V+  L
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKAL 383



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 37/248 (14%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALF--LQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           P+ V+YN +I+G C+ G +D A  L   LQ+KG  ++PD VTYN+LI+GL       EA 
Sbjct: 515 PDIVSYNVLINGFCRAGDIDGALKLLNVLQLKG--LSPDSVTYNTLINGLHRVGREEEAF 572

Query: 72  RLFFEMMDQGVQPSV---------------VTFNVIMDELCKNGKMD------------- 103
           +LF+   D    P+V               V FN+ M  L K   +D             
Sbjct: 573 KLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKE 632

Query: 104 -EASRLLDLMVQRDVRPNAFT---YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
            E  R L  +++ D R +  T   Y+  + G C +G+ + A  +F  +          S 
Sbjct: 633 GETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSC 692

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE-IHQVEHALKLFEEMQ 218
             LI+G CK ++++ A+ ++   +    K      N L   L E   ++E   +L   M+
Sbjct: 693 VKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLLESTEKMEIVSQLTNRME 752

Query: 219 RDDVAADT 226
           R     D+
Sbjct: 753 RAGYNVDS 760


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 192/402 (47%), Gaps = 43/402 (10%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T+  I+  LC    +DKA + F  +      P + TY  L+ GLC A+    A  +F
Sbjct: 162 NGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVF 221

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ +G +P ++ ++ ++D L K G++DEA +L+DLMV R   P A  Y++++ G C  
Sbjct: 222 EEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKC 281

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+I  A +    M     +    +Y+ ++ GY    +VE+A ++  EM  +   P  ++Y
Sbjct: 282 GRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISY 341

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV----------- 243
                 L+ I + E A K+FE M       D  TY   ID  CK G +            
Sbjct: 342 TMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDK 401

Query: 244 ------------------------EAVELFRTL---GILKCELDIQAYNCLIDGLCKSGR 276
                                   EA+EL++ +   GIL   +    YN +I+ LCK  +
Sbjct: 402 AAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTV---TYNTVINALCKLKK 458

Query: 277 LEIALELFRSLPRRV--LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           ++ ALEL R + RR   L   +VTY+++IHGL   G  ++A DL  +M +N V P+   +
Sbjct: 459 MDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTY 518

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +LI       K S+ +ELL +M +  + PD      +V +L
Sbjct: 519 TSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQIL 560



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 196/403 (48%), Gaps = 37/403 (9%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           + +PN  ++N ++ G       +   AL  +MK   I  +  T+  ++  LC   D ++A
Sbjct: 123 ISEPNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKA 182

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
              F  +     +P++ T+ V++D LCK  K++ A  + + M+++  +P+   YS+L+DG
Sbjct: 183 VSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDG 242

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               G+++ A +L   M + G     V+Y  ++ G CK   ++EA+   +EM  + ++P 
Sbjct: 243 LSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPR 302

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           V TY+ +  G   + +VE A  + EEM   D A DT +Y  FI+ L   G   EA ++F 
Sbjct: 303 VDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFE 362

Query: 251 TLGILKCELDIQAYNCLIDGLCKSG----------------------------------- 275
           T+    C+ D+  Y  +ID  CK G                                   
Sbjct: 363 TMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSS 422

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA--VAPNVII 333
           RLE ALEL++ + +  ++   VTYN +I+ LC   +MD+A +L  +M+     + P+++ 
Sbjct: 423 RLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVT 482

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +  +IHG  ++    +  +LL +M +  V+PD    + ++  L
Sbjct: 483 YSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTL 525



 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 177/359 (49%), Gaps = 3/359 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T N+++  L + G +  A   F     E   P+V ++N L+ G    +D+     L  EM
Sbjct: 98  TRNSLLLALVRGGHLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVVNALLREM 154

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
             +G+  +  T  VI+  LC    +D+A    + +      P  FTY+ L+DG C   K+
Sbjct: 155 KSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKV 214

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
            RA ++F  M   G K D ++Y+ LI+G  K   V+EA  L   MV++G  PT V Y ++
Sbjct: 215 ERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSI 274

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL +  +++ A+K  +EM+R  +     TY+  + G    G + +A  +   +    C
Sbjct: 275 VAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDC 334

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D  +Y   I+ L   GR E A ++F ++  +    D+ TY I+I   C +G M  A  
Sbjct: 335 APDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATH 394

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +   M++ AV PN  I+  ++ GFV+ ++  + +EL  ++ +  ++P     + V++ L
Sbjct: 395 VLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINAL 453



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 174/369 (47%), Gaps = 44/369 (11%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ + Y+++IDGL K G VD+A+ L   M      P  V Y S++ GLC      EA +
Sbjct: 230 KPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVK 289

Query: 73  -----------------------------------LFFEMMDQGVQPSVVTFNVIMDELC 97
                                              +  EM D+   P  +++ + ++ L 
Sbjct: 290 TIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALY 349

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
             G+ +EA ++ + MV++  +P+  TY  ++D FC  G +  A  +   M+    K +  
Sbjct: 350 SIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRY 409

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            Y ++++G+ K+  +EEAL LY+ ++  GI P+ VTYNT+   L ++ +++ AL+L  EM
Sbjct: 410 IYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREM 469

Query: 218 QR--DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLC 272
           QR  +++     TY+  I GL K G    A +L   +   G++    D   Y  LI  L 
Sbjct: 470 QRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIP---DCFTYTSLIQTLA 526

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
            +G++  A+EL   + +  +  D  TY  ++  LC    +D A DL  +M  N   PN  
Sbjct: 527 GAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNGHTPNEF 585

Query: 333 IFVTLIHGF 341
            F  +  GF
Sbjct: 586 TFKAVEKGF 594



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 1/121 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTY+ II GL K G  ++A  L  +M    + PD  TY SLI  L  A   + A  
Sbjct: 477 EPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAME 536

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+  G+ P   T+  ++  LC++  +D A  LL  M++    PN FT+  +  GF 
Sbjct: 537 LLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTFKAVEKGFR 595

Query: 133 L 133
           L
Sbjct: 596 L 596


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/375 (32%), Positives = 189/375 (50%), Gaps = 4/375 (1%)

Query: 4   GNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN-PDVVTYNSLIHGLC 62
           G+  +GV  +P+ V +NT+IDGLCK G  +   +L  +MK  NIN P+ VTYN LI G  
Sbjct: 347 GSNWVGV--EPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFF 404

Query: 63  HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
            A +++ A  LF +M ++GVQP+V+T N ++D LCK+G++  A    + M  + ++ NA 
Sbjct: 405 KAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAA 464

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TY+ L+  FC    INRA + F  M S GC  D V Y  LI+G C    + +A  +  ++
Sbjct: 465 TYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKL 524

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
              G       YN L  G  +  ++E   +L  EM+   V  DT TYNT I  L K G  
Sbjct: 525 KLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDF 584

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA-DVVTYNI 301
             A ++   +        +  Y  +I   C    ++  +++F  +     V  + V YNI
Sbjct: 585 ATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNI 644

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +I  LC +  +D+A  L  DM+   V PN   +  ++ G        K  EL+ +M E+ 
Sbjct: 645 LIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEA 704

Query: 362 VMPDASIVSMVVDLL 376
             PD   + ++ + L
Sbjct: 705 CRPDYITMEVLTEWL 719



 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 184/369 (49%), Gaps = 8/369 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE------NINPDVVTYNSLIHGLCHAND 66
           +P+ VT+  +++ LCK   +D+A  +F +++G+       + PDVV +N+LI GLC    
Sbjct: 313 RPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGK 372

Query: 67  WNEAKRLFFEM-MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             +   L  EM M    +P+ VT+N ++D   K G  D A  L   M +  V+PN  T +
Sbjct: 373 EEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLN 432

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL+DG C  G+++RA E F  M+  G K +  +Y  LI+ +C    +  A+  + EM+S 
Sbjct: 433 TLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSS 492

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G  P  V Y +L  GL    ++  A  +  +++    + D S YN  I G CK   +   
Sbjct: 493 GCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERV 552

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            EL   +     + D   YN LI  L K+G    A ++   + +  L   VVTY  +IH 
Sbjct: 553 YELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHA 612

Query: 306 LCNDGQMDKAHDLFLDM-EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            C+   +D+   +F +M   + V PN +I+  LI    R N   + I L+  MK K+V P
Sbjct: 613 YCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRP 672

Query: 365 DASIVSMVV 373
           + +  + ++
Sbjct: 673 NTTTYNAIL 681



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 183/370 (49%), Gaps = 8/370 (2%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +  + N ++  L +   + +   L  +M+   I P VVT+  L++ LC A   +EA ++F
Sbjct: 280 DAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVF 339

Query: 75  FEMMDQG------VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV-RPNAFTYSTL 127
             +  +G      V+P VV FN ++D LCK GK ++   LL+ M   ++ RPN  TY+ L
Sbjct: 340 DRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCL 399

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DGF   G  +RA ELF  M   G + + ++ N L++G CK+  V  A+  + EM  KG+
Sbjct: 400 IDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGL 459

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           K    TY  L      ++ +  A++ FEEM     + D   Y + I GLC  G + +A  
Sbjct: 460 KGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASV 519

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +   L +    LD   YN LI G CK  +LE   EL   +    +  D +TYN +I  L 
Sbjct: 520 VVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLG 579

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM-KEKKVMPDA 366
             G    A  +   M +  + P+V+ +  +IH +       + +++  +M    KV P+ 
Sbjct: 580 KTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNT 639

Query: 367 SIVSMVVDLL 376
            I ++++D L
Sbjct: 640 VIYNILIDAL 649



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 163/348 (46%), Gaps = 13/348 (3%)

Query: 31  FVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFN 90
            V+ +  LF Q+   + +P +   + L+  L  +    +A  +  EM  Q      VT  
Sbjct: 156 LVNDSLLLFNQLDPSSKSPQLC--HGLLRVLLKSGRAGDALHVLDEM-PQANSGFSVTGE 212

Query: 91  VIMDELCKNGKM---DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
           ++  EL ++G+     E   L+  + +R V P+ F  + L+   C   K   A E+   +
Sbjct: 213 IVFGELVRSGRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCV 272

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
             +G   D  S N L+    + ++++    L  EM  + I+P+VVT+  L   L +  ++
Sbjct: 273 MRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRI 332

Query: 208 EHALKLFEEMQRD------DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC-ELD 260
           + AL++F+ ++         V  D   +NT IDGLCK G   + + L   + +      +
Sbjct: 333 DEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPN 392

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
              YNCLIDG  K+G  + A ELFR +    +  +V+T N ++ GLC  G++ +A + F 
Sbjct: 393 TVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFN 452

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           +M+   +  N   +  LI  F  +N  ++ ++   +M      PDA +
Sbjct: 453 EMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVV 500



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 1/211 (0%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           YN +I G CK+  +++   L  +M+   + PD +TYN+LI  L    D+  A ++  +M+
Sbjct: 536 YNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMI 595

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-VRPNAFTYSTLMDGFCLTGKI 137
            +G++PSVVT+  I+   C    +DE  ++   M     V PN   Y+ L+D  C    +
Sbjct: 596 KEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDV 655

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           +RA  L   M+    + +  +YN ++ G    K + +A  L   MV +  +P  +T   L
Sbjct: 656 DRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVL 715

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
              L  + ++E      E  Q     A + T
Sbjct: 716 TEWLSAVGEIEKLKHFVEGYQDSSYPASSQT 746



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 55/97 (56%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNTV YN +ID LC+   VD+A +L   MK + + P+  TYN+++ G+      ++A  L
Sbjct: 637 PNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFEL 696

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD 110
              M+++  +P  +T  V+ + L   G++++    ++
Sbjct: 697 MDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVE 733


>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
 gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
          Length = 447

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 185/353 (52%), Gaps = 7/353 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V+Y  ++ G CK G   +A  L  +MK   + P+VV + ++I GLC A   ++A  L 
Sbjct: 29  NEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQA-LLH 87

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
           F  + +   P+V T+++++D LCK+G+  EA  L+  MV++   PN  TY+ L+DGF   
Sbjct: 88  FRRIGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKL 147

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            +++    L   M   GC+ D ++Y ++++ +CKN  ++EA  L   +     K  VVTY
Sbjct: 148 ERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALE----KRNVVTY 203

Query: 195 NTLFLGL--FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           N+LF  L   E  +   AL L E+M ++    +   Y T +  LCKN  + EA ++  ++
Sbjct: 204 NSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSM 263

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C+ D  +Y  L+     +GR   +LEL   +     + D  T N++IH  C  G +
Sbjct: 264 YSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDL 323

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +AH LF  M +    P+ + + TLI  F +  +P   ++LLH+M +    P+
Sbjct: 324 HEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPN 376



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 166/334 (49%), Gaps = 8/334 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            IG  C PN  TY+ ++D LCK G   +A  L  +M  +  +P+VVTYN+LI G      
Sbjct: 90  RIGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLER 149

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            +E   L  EM  +G +  V+T+ +I+D  CKN  +DEA RLL+ + +R    N  TY++
Sbjct: 150 LDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR----NVVTYNS 205

Query: 127 LMDGFCLTGKINRAEELFGSMESM---GCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           L      T + +R  E    +E M   G + + V+Y  ++   CKN  ++EA  +   M 
Sbjct: 206 LFTALS-TAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMY 264

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
           S+G K   V+Y  L +      +   +L+L   M       DT T N  I   CK G + 
Sbjct: 265 SQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLH 324

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           EA +LF+++           YN LI   CK+ + + A++L   + +     +V+TYN +I
Sbjct: 325 EAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSII 384

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
              C + + ++A  +F  M ++   P+ + + TL
Sbjct: 385 KSFCREQREEEARGIFQMMVDSGCFPDRVSYTTL 418



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 1/205 (0%)

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
           +  +K        YR  +        V+Y  L  G  +  + + AL+L +EM+ + V  +
Sbjct: 5   FVDSKRHRHGYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPN 64

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
              + T I GLC  G + +A+  FR +G   C  ++  Y+ L+D LCKSG+   A  L  
Sbjct: 65  VVIHTTIIRGLCTAGKVSQALLHFRRIG-EDCAPNVYTYSILVDALCKSGQPHEAYGLVT 123

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            + ++    +VVTYN +I G     ++D+   L  +M +     +VI +  ++  F + N
Sbjct: 124 EMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNN 183

Query: 346 KPSKVIELLHKMKEKKVMPDASIVS 370
              +   LL+ ++++ V+   S+ +
Sbjct: 184 SIDEAYRLLNALEKRNVVTYNSLFT 208



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 83/169 (49%), Gaps = 1/169 (0%)

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
            H  + +        A +  +Y   + G CK G   +A+EL   +       ++  +  +
Sbjct: 12  RHGYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTI 71

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           I GLC +G++  AL  FR +       +V TY+I++  LC  GQ  +A+ L  +M +   
Sbjct: 72  IRGLCTAGKVSQALLHFRRIGEDC-APNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGC 130

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +PNV+ +  LI GF ++ +  +V+ LL +M ++    D    +M++D+ 
Sbjct: 131 SPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIF 179


>gi|414591629|tpg|DAA42200.1| TPA: hypothetical protein ZEAMMB73_531547 [Zea mays]
          Length = 462

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 189/364 (51%), Gaps = 22/364 (6%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY T+I  LC+ G +D A   F QM  + + PD   Y+ LI G C      +AK 
Sbjct: 96  KPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKE 155

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  E+M+ G++  +V F  I++ LCK G++ +A  + DL V   + P+A  Y+ LMDG+C
Sbjct: 156 LISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYC 215

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L GK+ +A  +F +M S G + + V                       EM+ KGIKP+ +
Sbjct: 216 LVGKMEKALRVFDAMVSAGIEPNVVG----------------------EMLQKGIKPSTI 253

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN +  GLFE  +   A   F EM    +A +  TY+  + GL KN    EA+ LF+ L
Sbjct: 254 LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKEL 313

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  ++DI   N +I G+ ++ R+E A +LF S+ R  LV   VTY+IMI  L  +G +
Sbjct: 314 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLV 373

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A D+F  M+     P+  +   ++   ++ N+  +    L K+ E+    +     ++
Sbjct: 374 EEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLL 433

Query: 373 VDLL 376
           VDL 
Sbjct: 434 VDLF 437



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 144/296 (48%), Gaps = 17/296 (5%)

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           M  LCK GK+ E   + D M  +   P+ F+Y+ +++G+   G +    +LF  M   G 
Sbjct: 1   MGSLCKYGKIKEDRDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 60

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
             D  ++N+LI  Y     +++A+ ++ EM   G+KP VVTY T+   L  I +++ A++
Sbjct: 61  APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAME 120

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
            F +M    V  D   Y+  I G C +G +++A EL   +      LDI  +  +I+ LC
Sbjct: 121 KFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLC 180

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV- 331
           K GR+  A  +F       L  D V YN+++ G C  G+M+KA  +F  M    + PNV 
Sbjct: 181 KLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV 240

Query: 332 ------------IIFVTLIHGFVRINK--PSKVIELLHKMKEKKVMPDASIVSMVV 373
                       I++  +I G     +  P+KV    H+M E  +  +    S+V+
Sbjct: 241 GEMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV--KFHEMTESGIAMNKCTYSIVL 294



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 13/255 (5%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVV-------------TY 54
           + V   P+ V YN ++DG C  G ++KA  +F  M    I P+VV              Y
Sbjct: 196 VNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGEMLQKGIKPSTILY 255

Query: 55  NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
           N +I GL  A     AK  F EM + G+  +  T+++++  L KN   DEA  L   +  
Sbjct: 256 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRA 315

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
            +V+ +  T +T++ G   T ++  A++LF S+   G     V+Y+I+I    K   VEE
Sbjct: 316 MNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEE 375

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
           A  ++  M + G +P     N +   L + +++  A     ++   + + +  T    +D
Sbjct: 376 AEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVD 435

Query: 235 GLCKNGYIVEAVELF 249
                G   E +   
Sbjct: 436 LFSSKGTCREQIRFL 450


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 199/396 (50%), Gaps = 35/396 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + +TVTY  +I GLC+ G VD A  ++  M    +  DV  YNSLI G C      EA +
Sbjct: 296 QADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWK 355

Query: 73  LF-------------FEMMDQGV----------------------QPSVVTFNVIMDELC 97
            +             + +M +G+                       P  VTF  ++  LC
Sbjct: 356 FWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLC 415

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           +NG  + A  +L+         + F+YS++++ FC  G+ + A E++ +M   GCK +  
Sbjct: 416 ENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSH 475

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            YN LING+C+  ++ +A+ +Y EM S G  PT++TYNTL  GL +  + + A  L +EM
Sbjct: 476 VYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEM 535

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
                  D  TY + I GLC++  +  A+ ++  +     ++D+  +N LI GLC +G++
Sbjct: 536 LERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKV 595

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + A  ++  +  +    ++VTYN ++ G    G +DKA  L+  + +N + P+++ + T 
Sbjct: 596 DEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTR 655

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           I G    N+  + + LL+++    +MP     S++V
Sbjct: 656 IKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILV 691



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 191/375 (50%), Gaps = 5/375 (1%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           +G  G    PN  TYN I+  LC  G VD+A +LF  ++   + PD VTY++L+ GL   
Sbjct: 147 HGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKH 206

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD--VRPNAF 122
           +  + A  L  EM + GVQ   V +N ++    + G  ++A ++ + +V RD    PN  
Sbjct: 207 DQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLV-RDPGASPNLA 265

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TY  ++DG C  G+   A E++  M +   + D V+Y ILI+G C++ +V+ A  +Y +M
Sbjct: 266 TYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDM 325

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
           V  G+   V  YN+L  G  E+ +   A K ++      +   T TYN    GL  +G +
Sbjct: 326 VKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQIT-TYNIMTKGLLDSGMV 384

Query: 243 VEAVELFRTL-GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
            EA EL + L     C  D   +  LI GLC++G    A E+           DV +Y+ 
Sbjct: 385 SEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSS 444

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           MI+  C DG+   A++++ +M ++   PN  ++  LI+GF R++K +  I++  +M    
Sbjct: 445 MINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNG 504

Query: 362 VMPDASIVSMVVDLL 376
             P     + ++D L
Sbjct: 505 CCPTIITYNTLIDGL 519



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 180/328 (54%), Gaps = 1/328 (0%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEAKRLFF 75
            TYN +  GL   G V +A  L  Q++ + + +PD VT+ +LIHGLC     N A  +  
Sbjct: 369 TTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILE 428

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
           +  + G +  V +++ +++  CK+G+  +A+ +   MV+   +PN+  Y+ L++GFC   
Sbjct: 429 DARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVS 488

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           KIN A +++  M S GC    ++YN LI+G CK ++ +EA SL +EM+ +G KP + TY 
Sbjct: 489 KINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYA 548

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           +L  GL    +V+ AL++++E+    +  D   +N  I GLC  G + EA  ++  +   
Sbjct: 549 SLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEK 608

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
            C  ++  YN L+DG  + G ++ A  L+ ++    L  D+VTYN  I GLC+  +  + 
Sbjct: 609 NCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEG 668

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVR 343
             L  ++    + P VI +  L+   ++
Sbjct: 669 VLLLNEVLATGIMPTVITWSILVRAVIK 696



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 186/389 (47%), Gaps = 37/389 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PN  TY  ++DGLCK G   +A  ++ +M   N   D VTY  LIHGLC + D + A R
Sbjct: 261 SPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAAR 320

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++ +M+  G+   V  +N ++   C+ G+  EA +  D      +R    TY+ +  G  
Sbjct: 321 VYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLL 379

Query: 133 LTGKINRAEELFGSMES-MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            +G ++ A EL   +E+   C  D V++  LI+G C+N     A  +  +  + G +  V
Sbjct: 380 DSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDV 439

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +Y+++     +  +   A ++++ M +D    ++  YN  I+G C+   I +A++++  
Sbjct: 440 FSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIE 499

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY------------ 299
           +    C   I  YN LIDGLCK+ + + A  L + +  R    D+ TY            
Sbjct: 500 MTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKK 559

Query: 300 -----------------------NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
                                  NI+IHGLC+ G++D+A  ++L+M+E   +PN++ + T
Sbjct: 560 VDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNT 619

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           L+ GF  I    K   L   + +  + PD
Sbjct: 620 LMDGFYEIGSIDKAASLWTAILDNGLKPD 648



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 142/262 (54%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           +Y+++I+  CK+G    A  ++  M  +   P+   YN+LI+G C  +  N+A +++ EM
Sbjct: 441 SYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEM 500

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
              G  P+++T+N ++D LCK  K  EAS L   M++R  +P+  TY++L+ G C   K+
Sbjct: 501 TSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKV 560

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  ++  +   G + D + +NILI+G C   +V+EA  +Y EM  K   P +VTYNTL
Sbjct: 561 DVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTL 620

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G +EI  ++ A  L+  +  + +  D  TYNT I GLC      E V L   +     
Sbjct: 621 MDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGI 680

Query: 258 ELDIQAYNCLIDGLCKSGRLEI 279
              +  ++ L+  + K G ++I
Sbjct: 681 MPTVITWSILVRAVIKYGPIQI 702



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 155/301 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT+ T+I GLC+ G+ ++A  +    +      DV +Y+S+I+  C     ++A 
Sbjct: 400 CSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDAN 459

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            ++  M+  G +P+   +N +++  C+  K+++A ++   M      P   TY+TL+DG 
Sbjct: 460 EVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGL 519

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K   A  L   M   G K D  +Y  LI G C++K+V+ AL ++ E++  G++  V
Sbjct: 520 CKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDV 579

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           + +N L  GL    +V+ A  ++ EM+  + + +  TYNT +DG  + G I +A  L+  
Sbjct: 580 MVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTA 639

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + DI  YN  I GLC   R    + L   +    ++  V+T++I++  +   G 
Sbjct: 640 ILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGP 699

Query: 312 M 312
           +
Sbjct: 700 I 700



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 148/318 (46%), Gaps = 40/318 (12%)

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ----RDVRPNAFTYSTLMDGFCLTGK 136
           G  P V + N ++D   +  +  +A      +      R + PN  TY+ ++   C  G 
Sbjct: 114 GCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGD 173

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           ++RA  LF S+   G   D V+Y+ L++G  K+ +++ AL L  EM + G++   V YN 
Sbjct: 174 VDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNA 233

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAA-DTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           L  G F     E A+K++E++ RD  A+ + +TY   +DGLCK G   EA E++  +   
Sbjct: 234 LLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMAN 293

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV------------------- 296
             + D   Y  LI GLC+SG ++ A  ++  + +  LV DV                   
Sbjct: 294 NHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEA 353

Query: 297 ---------------VTYNIMIHGLCNDGQMDKAHDLFLDMEENA-VAPNVIIFVTLIHG 340
                           TYNIM  GL + G + +A +L   +E +A  +P+ + F TLIHG
Sbjct: 354 WKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHG 413

Query: 341 FVRINKPSKVIELLHKMK 358
                  ++  E+L   +
Sbjct: 414 LCENGYANRAFEILEDAR 431



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 5/127 (3%)

Query: 245 AVELFRTL-GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR----RVLVADVVTY 299
           A+  FR L  +L C   ++++N L+D   ++ R   A   F SL      R +  ++ TY
Sbjct: 102 ALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTY 161

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           NI++  LC  G +D+A  LF  +    VAP+ + + TL+ G  + ++    ++LL +M  
Sbjct: 162 NIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPN 221

Query: 360 KKVMPDA 366
             V  DA
Sbjct: 222 YGVQADA 228


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 188/401 (46%), Gaps = 38/401 (9%)

Query: 14  PNTVT---YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           P +V+    + ++DG CK G VD A+AL  +M    +  + + YNSL+       D    
Sbjct: 127 PGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARV 186

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDEL---------------------------------- 96
           + L   M + G++ +V T+ +++D L                                  
Sbjct: 187 QELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINA 246

Query: 97  -CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHD 155
            C+ G +  AS + D  V   + PN  TY  L++GFC  G++  AE L   M+  G  H+
Sbjct: 247 YCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHN 306

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
            + +N +I+GYC+   V+ AL +   M   GI+  V TYNTL  GL  ++++  A  L  
Sbjct: 307 QIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLH 366

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
            M    V  +  TY T I   CK G +VEA  LFR +        +  YN ++DG  K G
Sbjct: 367 IMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKG 426

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
            +  A    + + ++ LV DV TY  ++HG C +G++D A  LF +M+     PNV+ + 
Sbjct: 427 SIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYT 486

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            LI G  +  +  +  +L   M +  + PD S+ S +V  L
Sbjct: 487 ALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 163/334 (48%), Gaps = 35/334 (10%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY  ++D L   G + K +A+  +MK +N+  DV  Y ++I+  C A +   A  +F E 
Sbjct: 204 TYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDEC 263

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +  G++P+  T+ V+++  CK G+M+ A  LL  M  R V  N   ++T++DG+C  G +
Sbjct: 264 VGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMV 323

Query: 138 NRAEELFGSMESMGCKHDDVSYNILING-------------------------------- 165
           + A ++  +ME MG + D  +YN L  G                                
Sbjct: 324 DNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTL 383

Query: 166 ---YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
              +CK  ++ EA  L+REM  KG  P+VVTYN +  G  +   +  A +  +EM++  +
Sbjct: 384 ISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGL 443

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
             D  TY + + G C NG +  A++LF  +     E ++ AY  LI GL K GR E A +
Sbjct: 444 VPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQ 503

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
           L+  + +  L  D   Y+ ++  L  D + D  H
Sbjct: 504 LYDDMLKAGLTPDDSLYSALVGSLHTDNRKDIHH 537



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 137/272 (50%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G   +PN  TY  +I+G CK G ++ A+ L   M+G  +  + + +N++I G C     
Sbjct: 264 VGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMV 323

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           + A ++   M   G++  V T+N +   LC+  +M EA  LL +M+++ V PN  TY+TL
Sbjct: 324 DNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTL 383

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +   C  G +  A  LF  M   G     V+YN++++GY K   + EA    +EM  KG+
Sbjct: 384 ISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGL 443

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P V TY +L  G     +V+ ALKLFEEM+      +   Y   I GL K G   EA +
Sbjct: 444 VPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQ 503

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
           L+  +       D   Y+ L+  L    R +I
Sbjct: 504 LYDDMLKAGLTPDDSLYSALVGSLHTDNRKDI 535



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%)

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A  L R LG     +   A + ++DG CKSGR++ A  L   +PR  +  + + YN ++ 
Sbjct: 116 AAILTRALGSCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLD 175

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
                    +  +L   ME   +   V  +  L+         SKV  ++ +MK K V  
Sbjct: 176 CYVRRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAG 235

Query: 365 DASIVSMVVD 374
           D  + + V++
Sbjct: 236 DVYLYTAVIN 245


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/336 (32%), Positives = 183/336 (54%), Gaps = 2/336 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N   +N +++  CKEG +  A+ +F ++   ++ P VV++N+LI+G C   + +   RL 
Sbjct: 239 NVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLK 298

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M     +P V T++ +++ LCK  KMD A RL   M +R + PN   ++TL+ G    
Sbjct: 299 HHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRN 358

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+I+  +E +  M S G + D V YN L+NG+CKN ++  A ++   M+ +G++P  VTY
Sbjct: 359 GQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTY 418

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            TL  G      V+ AL++ +EM ++ +  D   ++  I G+CK G +++A    R +  
Sbjct: 419 TTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLR 478

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + D   Y  ++D  CK G  +   +L + +     + +VVTYN++++GLC  GQM  
Sbjct: 479 AGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKN 538

Query: 315 AHDLFLDMEEN-AVAPNVIIFVTLIHGFVRINKPSK 349
           A D+ LD   N  V P+ I + TL+ G  R    SK
Sbjct: 539 A-DMLLDAMLNVGVVPDDITYNTLLEGHHRHANASK 573



 Score =  176 bits (446), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 167/316 (52%)

Query: 50  DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
           +V  +N L++  C   +  +A+++F E+  + ++P+VV+FN +++  CK G +D   RL 
Sbjct: 239 NVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLK 298

Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
             M +   RP+ FTYS L++  C   K++ A  LF  M   G   +DV +  LI+G+ +N
Sbjct: 299 HHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRN 358

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
            +++     Y++M+SKG++P +V YNTL  G  +   +  A  + + M R  +  D  TY
Sbjct: 359 GQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTY 418

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
            T IDG C+ G +  A+E+ + +     ELD   ++ LI G+CK GR+  A    R + R
Sbjct: 419 TTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLR 478

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
             +  D VTY +M+   C  G       L  +M+ +   PNV+ +  L++G  ++ +   
Sbjct: 479 AGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKN 538

Query: 350 VIELLHKMKEKKVMPD 365
              LL  M    V+PD
Sbjct: 539 ADMLLDAMLNVGVVPD 554



 Score =  170 bits (431), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 163/329 (49%), Gaps = 38/329 (11%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  V++NT+I+G CK G +D    L   M+     PDV TY++LI+ LC  N  + A R
Sbjct: 272 RPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHR 331

Query: 73  LFFE-----------------------------------MMDQGVQPSVVTFNVIMDELC 97
           LF+E                                   M+ +G+QP +V +N +++  C
Sbjct: 332 LFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFC 391

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           KNG +  A  ++D M++R +RP+  TY+TL+DGFC  G ++ A E+   M+  G + D V
Sbjct: 392 KNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRV 451

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            ++ LI G CK   V +A    REM+  G+KP  VTY  +     +    +   KL +EM
Sbjct: 452 GFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
           Q D    +  TYN  ++GLCK G +  A  L   +  +    D   YN L++G     R 
Sbjct: 512 QSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEG---HHRH 568

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGL 306
             A + ++  P   +VAD+ +Y  +++ L
Sbjct: 569 ANASKHYKQKPEIGIVADLASYKSLVNEL 597



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 163/336 (48%)

Query: 30  GFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTF 89
           GF+      F   +  N    +    +L+  +   N        + E++D G   +V  F
Sbjct: 184 GFIPDVIQCFRLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVF 243

Query: 90  NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
           N++M++ CK G + +A ++ D + +R +RP   +++TL++G+C  G ++    L   ME 
Sbjct: 244 NILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEK 303

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
              + D  +Y+ LIN  CK  +++ A  L+ EM  +G+ P  V + TL  G     Q++ 
Sbjct: 304 SRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDL 363

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
             + +++M    +  D   YNT ++G CKNG +V A  +   +       D   Y  LID
Sbjct: 364 MKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLID 423

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           G C+ G ++ ALE+ + + +  +  D V ++ +I G+C +G++  A     +M    + P
Sbjct: 424 GFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKP 483

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + + +  ++  F +        +LL +M+    +P+
Sbjct: 484 DDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPN 519



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 125/255 (49%)

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           N + ++ LM+ FC  G I  A+++F  +     +   VS+N LINGYCK   ++    L 
Sbjct: 239 NVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLK 298

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
             M     +P V TY+ L   L + ++++ A +LF EM    +  +   + T I G  +N
Sbjct: 299 HHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRN 358

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G I    E ++ +     + DI  YN L++G CK+G L  A  +   + RR L  D VTY
Sbjct: 359 GQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTY 418

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
             +I G C  G +D A ++  +M++N +  + + F  LI G  +  +       L +M  
Sbjct: 419 TTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLR 478

Query: 360 KKVMPDASIVSMVVD 374
             + PD    +M++D
Sbjct: 479 AGMKPDDVTYTMMMD 493



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/137 (21%), Positives = 63/137 (45%)

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G+I + ++ FR        + I+    L+D + K          +  +       +V  +
Sbjct: 184 GFIPDVIQCFRLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVF 243

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           NI+++  C +G +  A  +F ++ + ++ P V+ F TLI+G+ ++        L H M++
Sbjct: 244 NILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEK 303

Query: 360 KKVMPDASIVSMVVDLL 376
            +  PD    S +++ L
Sbjct: 304 SRTRPDVFTYSALINAL 320


>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
          Length = 475

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 184/364 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N + YN+++D   +E   D+   +   M+ E I P V TY  L+ GL  A D  + + 
Sbjct: 99  KVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEA 158

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM  + +   V  ++ +++  C+ G +  AS + D  V   + PN  TY  L++GFC
Sbjct: 159 VFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFC 218

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  AE L   M+  G   + + +N +I+GYC+   V++AL +   M   GI+  V 
Sbjct: 219 KIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVY 278

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GL   ++++ A  L   M    V  +  +Y T I   C  G +VEA  LFR +
Sbjct: 279 TYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREM 338

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                E  +  YN ++DG  K G +  A      + ++ LV D+ +Y  ++HG C +G++
Sbjct: 339 AGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKV 398

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  LF +M++    PN++ +  LI G  +  +  +  +L   M    + PD ++ S +
Sbjct: 399 DVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSAL 458

Query: 373 VDLL 376
           V  L
Sbjct: 459 VGSL 462



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 167/339 (49%), Gaps = 5/339 (1%)

Query: 30  GFVDKAKALFLQMKGENINPDVVTYNS---LIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           G +D A  L  Q       PD VT  S   ++ G C +     A++L  EM   GV+ + 
Sbjct: 45  GHLDTAADLLKQ--AATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNA 102

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
           + +N ++D   +    D  + +L +M    + P   TY+ L+DG      I + E +F  
Sbjct: 103 LCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEE 162

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M+S     D   Y+ +IN YC+   V  A  ++ E V  GI+P   TY  L  G  +I Q
Sbjct: 163 MKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQ 222

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           +E A  L  +MQ   V  +   +NT IDG C+   + +A+E+   +  +  ELD+  YN 
Sbjct: 223 MEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNT 282

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           L  GL ++ R++ A  L R +  + +  + V+Y  +I   CN+G M +A  LF +M  N 
Sbjct: 283 LACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 342

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             P+++ +  ++ G+++     +     ++M++K ++PD
Sbjct: 343 AEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPD 381



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 162/336 (48%), Gaps = 35/336 (10%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P   TY  ++DGL     + K +A+F +MK +N++ DV  Y+S+I+  C A +   A  
Sbjct: 134 EPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASE 193

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F E +  G++P+  T+  +++  CK G+M+ A  L+  M  R V  N   ++T++DG+C
Sbjct: 194 VFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYC 253

Query: 133 LTGKINRAEELFGSMESMGCKHD-----------------------------------DV 157
               +++A E+   ME MG + D                                    V
Sbjct: 254 RKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHV 313

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           SY  LI+ +C   ++ EA  L+REM   G +P++VTYN +  G  +   +  A +   EM
Sbjct: 314 SYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEM 373

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
           ++  +  D  +Y   + G C NG +  A+ LF  +     + ++ AY  LI GL K GR 
Sbjct: 374 EKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRS 433

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           E A +L+ ++    L  D   Y+ ++  L  D + +
Sbjct: 434 EEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQN 469



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 128/242 (52%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G   +PN  TY  +I+G CK G ++ A+ L   M+   +  + + +N++I G C  N  
Sbjct: 199 VGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMV 258

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  +   M   G++  V T+N +   L +  +MDEA  LL +M+++ VRPN  +Y+TL
Sbjct: 259 DKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTL 318

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +   C  G +  A  LF  M   G +   V+YN++++GY K   + EA     EM  KG+
Sbjct: 319 ISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGL 378

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P + +Y  L  G     +V+ AL+LFEEM++     +   Y   I GL K G   EA +
Sbjct: 379 VPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQ 438

Query: 248 LF 249
           L+
Sbjct: 439 LY 440



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 85/185 (45%)

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           T ++ + +  G  +  +V HA +L +EM R  V  +   YN+ +D   +        E+ 
Sbjct: 66  TPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEML 125

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + +     E  +  Y  L+DGL  +  +     +F  +  + L  DV  Y+ +I+  C  
Sbjct: 126 KVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRA 185

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G + +A ++F +   N + PN   +  LI+GF +I +      L+  M+ + V  +  + 
Sbjct: 186 GNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVF 245

Query: 370 SMVVD 374
           + ++D
Sbjct: 246 NTMID 250



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 46/94 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +Y  ++ G C  G VD A  LF +MK     P++V Y +LI GL       EA +L
Sbjct: 380 PDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQL 439

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR 107
           +  M+  G+ P    ++ ++  L  + K +   R
Sbjct: 440 YDNMLGDGLTPDDALYSALVGSLHTDKKQNVKPR 473



 Score = 41.2 bits (95), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 7/107 (6%)

Query: 274 SGRLEIALELFR----SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           +G L+ A +L +    S P  V     ++ ++++ G C  G++  A  L  +M  + V  
Sbjct: 44  AGHLDTAADLLKQAATSCPDSVTP---LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKV 100

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           N + + +L+  + R     +V E+L  M+ + + P     +++VD L
Sbjct: 101 NALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGL 147


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 182/367 (49%), Gaps = 16/367 (4%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V  + +   LC  G  +KA ++  +M  +   PD  TY+ +I  LC+A+  + A  LF
Sbjct: 444 NKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLF 503

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM    V P V T+ +++D  CK G + +A +  D MV+    PN  TY+ L+  +   
Sbjct: 504 EEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKA 563

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-------- 186
            K++ A ELF  M S GC  + V+Y  LI+G+CK+ ++E+A  +Y  M            
Sbjct: 564 RKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMY 623

Query: 187 --------IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
                     P + TY  L  GL + H+V+ A  L + M  +    +   Y+  IDG CK
Sbjct: 624 FKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCK 683

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
            G + EA  +F  +       ++  Y+ LID L K  RL++AL++   +       +V+ 
Sbjct: 684 VGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVII 743

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y  MI GLC  G+ D+A+ L   MEE    PNV+ +  +I GF +  K  K +EL+ +M 
Sbjct: 744 YTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG 803

Query: 359 EKKVMPD 365
            K   P+
Sbjct: 804 AKGCAPN 810



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 190/385 (49%), Gaps = 22/385 (5%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMK--GENINPDVV----TYNSLIHGLCHAN 65
           C+P  V YN +I G+C    +     L L  K  GE ++  VV      ++L   LC A 
Sbjct: 400 CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAG 459

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            + +A  +  EMM +G  P   T++ ++  LC   K+D A  L + M    V P+ FTY+
Sbjct: 460 KFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYT 519

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+D FC  G + +A + F  M   GC  + V+Y  LI+ Y K +++  A  L+  M+S+
Sbjct: 520 ILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE 579

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS----------------TY 229
           G  P VVTY  L  G  +  Q+E A +++  M+ +    D                  TY
Sbjct: 580 GCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTY 639

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
              +DGLCK   + EA +L   + +  CE +   Y+ LIDG CK G+L+ A  +F  +  
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
           R    +V TY+ +I  L  D ++D A  +   M EN+ APNVII+  +I G  ++ K  +
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDE 759

Query: 350 VIELLHKMKEKKVMPDASIVSMVVD 374
              L+  M+EK   P+    + ++D
Sbjct: 760 AYRLMSMMEEKGCHPNVVTYTAMID 784



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 114/347 (32%), Positives = 182/347 (52%), Gaps = 18/347 (5%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G +  PN  TY  ++DGLCK   V +A+ L   M  E   P+ + Y++LI G C     +
Sbjct: 629 GNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLD 688

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA+ +F +M ++G  P+V T++ ++D L K+ ++D A ++L  M++    PN   Y+ ++
Sbjct: 689 EAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMI 748

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C  GK + A  L   ME  GC  + V+Y  +I+G+ K  +V++ L L R+M +KG  
Sbjct: 749 DGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCA 808

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  VTY  L         ++ A +L +EM++       + Y   I+G  +        E 
Sbjct: 809 PNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNR--------EF 860

Query: 249 FRTLGILKCELD-------IQAYNCLIDGLCKSGRLEIALELFRSLPR--RVLVADVVTY 299
             +LG+L  E+        I AY  LID  CK+GRLE+ALEL + +        AD   Y
Sbjct: 861 IISLGLLD-EIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLY 919

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           + +I  L    ++DKA +L+ DM +    P + IF  L+ G +RIN+
Sbjct: 920 SSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINR 966



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 179/421 (42%), Gaps = 57/421 (13%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTY------------------ 54
           K +TV Y  +I GLC+    ++A     +M+  +  P+VVTY                  
Sbjct: 296 KLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKR 355

Query: 55  -----------------NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
                            NSLIH  C + D++ A +L  +M D G QP  V +N+++  +C
Sbjct: 356 ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC 415

Query: 98  KNGKMDE------ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
            N K+        A +    M+   V  N    S L    C  GK  +A  +   M S G
Sbjct: 416 GNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKG 475

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
              D  +Y+ +I   C   +V+ A  L+ EM S  + P V TY  L     ++  ++ A 
Sbjct: 476 FIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQAR 535

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           K F+EM RD  A +  TY   I    K   +  A ELF  +    C  ++  Y  LIDG 
Sbjct: 536 KWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595

Query: 272 CKSGRLEIALELFRSLPRRVLVADV----------------VTYNIMIHGLCNDGQMDKA 315
           CKSG++E A +++  +     + DV                 TY  ++ GLC   ++ +A
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEA 655

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
            DL   M      PN I++  LI GF ++ K  +   +  KM E+   P+    S ++D 
Sbjct: 656 RDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDR 715

Query: 376 L 376
           L
Sbjct: 716 L 716



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 179/414 (43%), Gaps = 60/414 (14%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T    +  LCK G   +A AL   ++ E    D V Y  +I GLC A+ + EA      M
Sbjct: 269 TLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRM 325

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
                 P+VVT+ +++    +  ++    R+L +M+     P+   +++L+  +C +G  
Sbjct: 326 RSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDY 385

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV------------------------- 172
           + A +L   M   GC+   V YNILI G C N+++                         
Sbjct: 386 SYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNK 445

Query: 173 ----------------EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
                           E+A S+ REM+SKG  P   TY+ +   L    +V++A  LFEE
Sbjct: 446 VNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEE 505

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M+ + V  D  TY   ID  CK G + +A + F  +    C  ++  Y  LI    K+ +
Sbjct: 506 MKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK 565

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA---------- 326
           +  A ELF  +     + +VVTY  +I G C  GQ++KA  ++  M  NA          
Sbjct: 566 MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFK 625

Query: 327 ------VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
                   PN+  +  L+ G  + +K  +  +LL  M  +   P+  +   ++D
Sbjct: 626 IDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALID 679



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 146/390 (37%), Gaps = 83/390 (21%)

Query: 54  YNSLIHGL-CHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG----KMDEASRL 108
           Y++L+  L C  ND    ++   E+ D+  +      NV++ + C+NG     ++E  RL
Sbjct: 165 YHALLEVLGCGGND-RVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRL 223

Query: 109 LDLMVQRDVRPNAFTYSTL--------------------------MDGFCLT------GK 136
            DL      +P+  TY+ L                          MDG+ L        K
Sbjct: 224 KDL----GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCK 279

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
             R  E    +E    K D V Y  +I+G C+    EEA+     M S    P VVTY  
Sbjct: 280 AGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRI 339

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G     Q+    ++   M  +        +N+ I   C++G    A +L + +G   
Sbjct: 340 LLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCG 399

Query: 257 CELDIQAYNCLIDG-----------------------------------------LCKSG 275
           C+     YN LI G                                         LC +G
Sbjct: 400 CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAG 459

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           + E A  + R +  +  + D  TY+ +I  LCN  ++D A  LF +M+ N V P+V  + 
Sbjct: 460 KFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYT 519

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            LI  F ++    +  +   +M      P+
Sbjct: 520 ILIDSFCKVGLLQQARKWFDEMVRDGCAPN 549



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 3/214 (1%)

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           N+LI   C+N     AL     +   G KP+ +TYN L     E  +++ A  +  EM  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
                D  T   F+  LCK G   EA+ L         +LD   Y  +I GLC++   E 
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEF---KLDTVIYTQMISGLCEASLFEE 317

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A++    +     + +VVTY I++ G     Q+ +   +   M      P+  IF +LIH
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            + R    S   +LL KM +    P   + ++++
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILI 411


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 182/367 (49%), Gaps = 16/367 (4%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V  + +   LC  G  +KA ++  +M  +   PD  TY+ +I  LC+A+  + A  LF
Sbjct: 444 NKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLF 503

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM    V P V T+ +++D  CK G + +A +  D MV+    PN  TY+ L+  +   
Sbjct: 504 EEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKA 563

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-------- 186
            K++ A ELF  M S GC  + V+Y  LI+G+CK+ ++E+A  +Y  M            
Sbjct: 564 RKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMY 623

Query: 187 --------IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
                     P + TY  L  GL + H+V+ A  L + M  +    +   Y+  IDG CK
Sbjct: 624 FKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCK 683

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
            G + EA  +F  +       ++  Y+ LID L K  RL++AL++   +       +V+ 
Sbjct: 684 VGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVII 743

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y  MI GLC  G+ D+A+ L   MEE    PNV+ +  +I GF +  K  K +EL+ +M 
Sbjct: 744 YTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG 803

Query: 359 EKKVMPD 365
            K   P+
Sbjct: 804 AKGCAPN 810



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 190/385 (49%), Gaps = 22/385 (5%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMK--GENINPDVV----TYNSLIHGLCHAN 65
           C+P  V YN +I G+C    +     L L  K  GE ++  VV      ++L   LC A 
Sbjct: 400 CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAG 459

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            + +A  +  EMM +G  P   T++ ++  LC   K+D A  L + M    V P+ FTY+
Sbjct: 460 KFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYT 519

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+D FC  G + +A + F  M   GC  + V+Y  LI+ Y K +++  A  L+  M+S+
Sbjct: 520 ILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE 579

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS----------------TY 229
           G  P VVTY  L  G  +  Q+E A +++  M+ +    D                  TY
Sbjct: 580 GCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTY 639

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
              +DGLCK   + EA +L   + +  CE +   Y+ LIDG CK G+L+ A  +F  +  
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
           R    +V TY+ +I  L  D ++D A  +   M EN+ APNVII+  +I G  ++ K  +
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDE 759

Query: 350 VIELLHKMKEKKVMPDASIVSMVVD 374
              L+  M+EK   P+    + ++D
Sbjct: 760 AYRLMSMMEEKGCHPNVVTYTAMID 784



 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 186/354 (52%), Gaps = 18/354 (5%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G +  PN  TY  ++DGLCK   V +A+ L   M  E   P+ + Y++LI G C     +
Sbjct: 629 GNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLD 688

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA+ +F +M ++G  P+V T++ ++D L K+ ++D A ++L  M++    PN   Y+ ++
Sbjct: 689 EAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMI 748

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C  GK + A  L   ME  GC  + V+Y  +I+G+ K  +V++ L L R+M +KG  
Sbjct: 749 DGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCA 808

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  VTY  L         ++ A +L +EM++       + Y   I+G  +        E 
Sbjct: 809 PNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNR--------EF 860

Query: 249 FRTLGILKCELD-------IQAYNCLIDGLCKSGRLEIALELFRSLPR--RVLVADVVTY 299
             +LG+L  E+        I AY  LID  CK+GRLE+ALEL + +        AD   Y
Sbjct: 861 IISLGLLD-EIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLY 919

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
           + +I  L    ++DKA +L+ DM +    P + IF  L+ G +RIN+  + ++L
Sbjct: 920 SSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 179/421 (42%), Gaps = 57/421 (13%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTY------------------ 54
           K +TV Y  +I GLC+    ++A     +M+  +  P+VVTY                  
Sbjct: 296 KLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKR 355

Query: 55  -----------------NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
                            NSLIH  C + D++ A +L  +M D G QP  V +N+++  +C
Sbjct: 356 ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC 415

Query: 98  KNGKMDE------ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
            N K+        A +    M+   V  N    S L    C  GK  +A  +   M S G
Sbjct: 416 GNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKG 475

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
              D  +Y+ +I   C   +V+ A  L+ EM S  + P V TY  L     ++  ++ A 
Sbjct: 476 FIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQAR 535

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           K F+EM RD  A +  TY   I    K   +  A ELF  +    C  ++  Y  LIDG 
Sbjct: 536 KWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595

Query: 272 CKSGRLEIALELFRSLPRRVLVADV----------------VTYNIMIHGLCNDGQMDKA 315
           CKSG++E A +++  +     + DV                 TY  ++ GLC   ++ +A
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEA 655

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
            DL   M      PN I++  LI GF ++ K  +   +  KM E+   P+    S ++D 
Sbjct: 656 RDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDR 715

Query: 376 L 376
           L
Sbjct: 716 L 716



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 179/414 (43%), Gaps = 60/414 (14%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T    +  LCK G   +A AL   ++ E    D V Y  +I GLC A+ + EA      M
Sbjct: 269 TLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRM 325

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
                 P+VVT+ +++    +  ++    R+L +M+     P+   +++L+  +C +G  
Sbjct: 326 RSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDY 385

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV------------------------- 172
           + A +L   M   GC+   V YNILI G C N+++                         
Sbjct: 386 SYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNK 445

Query: 173 ----------------EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
                           E+A S+ REM+SKG  P   TY+ +   L    +V++A  LFEE
Sbjct: 446 VNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEE 505

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M+ + V  D  TY   ID  CK G + +A + F  +    C  ++  Y  LI    K+ +
Sbjct: 506 MKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK 565

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA---------- 326
           +  A ELF  +     + +VVTY  +I G C  GQ++KA  ++  M  NA          
Sbjct: 566 MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFK 625

Query: 327 ------VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
                   PN+  +  L+ G  + +K  +  +LL  M  +   P+  +   ++D
Sbjct: 626 IDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALID 679



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/398 (22%), Positives = 149/398 (37%), Gaps = 83/398 (20%)

Query: 54  YNSLIHGL-CHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG----KMDEASRL 108
           Y++L+  L C  ND    ++   E+ D+  +      NV++ + C+NG     ++E  RL
Sbjct: 165 YHALLEVLGCGGND-RVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRL 223

Query: 109 LDLMVQRDVRPNAFTYSTL--------------------------MDGFCLT------GK 136
            DL      +P+  TY+ L                          MDG+ L        K
Sbjct: 224 KDL----GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCK 279

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
             R  E    +E    K D V Y  +I+G C+    EEA+     M S    P VVTY  
Sbjct: 280 AGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRI 339

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G     Q+    ++   M  +        +N+ I   C++G    A +L + +G   
Sbjct: 340 LLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCG 399

Query: 257 CELDIQAYNCLIDG-----------------------------------------LCKSG 275
           C+     YN LI G                                         LC +G
Sbjct: 400 CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAG 459

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           + E A  + R +  +  + D  TY+ +I  LCN  ++D A  LF +M+ N V P+V  + 
Sbjct: 460 KFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYT 519

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            LI  F ++    +  +   +M      P+    + ++
Sbjct: 520 ILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 180/351 (51%), Gaps = 3/351 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+   Y  +I  LCK   +D A + F QM      PD VTY  L+H L  A  W +  +
Sbjct: 46  KPDAFLYTVVIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQ 105

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM+ +G  P +VT+  +++  CK G++D+A  L+  +      P+   YSTL+DG C
Sbjct: 106 IFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLC 165

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +   A ELF    + G   D + Y   I+G CK  +++EA +++ +M+  G  P  V
Sbjct: 166 KHDRHEEARELFEM--AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPV 223

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA-VELFRT 251
           +YN +   L + ++V  A +L ++                +DGLCK+  + EA V L R 
Sbjct: 224 SYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERM 283

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L        +  Y+ +IDGLCK+ RL+ A  + + + R   V DVVTY  +I   C  G+
Sbjct: 284 LEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGR 343

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           +D+A +LF  M E   A +V+ +  LI G+ R  K  + I ++ +M  + +
Sbjct: 344 LDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 394



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 171/338 (50%), Gaps = 3/338 (0%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           L  +MK   I P +VT+ SLI  LC  N  N+A ++F +M+D  V+P    + V++  LC
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K  K+D A+   + MVQ    P+  TY+ L+       K  +  ++F  M S G   + V
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y  ++NGYCK   +++ALSL R +   G  P+   Y+TL  GL +  + E A +LF EM
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELF-EM 179

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
              DV  D   Y +FI GLCK G + EA  +   +    C  D  +YN +I  LCK  R+
Sbjct: 180 AAGDV-QDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 238

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM-EENAVAPNVIIFVT 336
             A EL      R  +  V    +++ GLC   ++++A  +   M E    AP+V+ +  
Sbjct: 239 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSA 298

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +I G  + ++      +L KM+    +PD    + ++D
Sbjct: 299 VIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIID 336



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 69/177 (38%), Positives = 103/177 (58%), Gaps = 1/177 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V+YN II  LCK+  V +AK L  Q       P V     L+ GLC +    EA 
Sbjct: 218 CAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEAC 277

Query: 72  RLFFEMMDQGVQ-PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            +   M++ G + PSVVT++ ++D LCK  ++D+A  +L  M +    P+  TY+ ++D 
Sbjct: 278 VILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDA 337

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           FC  G+++ A ELF  M   GC  D V+YNILI GYC+  +V+EA+++  EM  +GI
Sbjct: 338 FCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 394


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 182/367 (49%), Gaps = 16/367 (4%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V  + +   LC  G  +KA ++  +M  +   PD  TY+ +I  LC+A+  + A  LF
Sbjct: 444 NKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLF 503

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM    V P V T+ +++D  CK G + +A +  D MV+    PN  TY+ L+  +   
Sbjct: 504 EEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKA 563

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-------- 186
            K++ A ELF  M S GC  + V+Y  LI+G+CK+ ++E+A  +Y  M            
Sbjct: 564 RKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMY 623

Query: 187 --------IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
                     P + TY  L  GL + H+V+ A  L + M  +    +   Y+  IDG CK
Sbjct: 624 FKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCK 683

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
            G + EA  +F  +       ++  Y+ LID L K  RL++AL++   +       +V+ 
Sbjct: 684 VGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVII 743

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y  MI GLC  G+ D+A+ L   MEE    PNV+ +  +I GF +  K  K +EL+ +M 
Sbjct: 744 YTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG 803

Query: 359 EKKVMPD 365
            K   P+
Sbjct: 804 AKGCAPN 810



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 190/385 (49%), Gaps = 22/385 (5%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMK--GENINPDVV----TYNSLIHGLCHAN 65
           C+P  V YN +I G+C    +     L L  K  GE ++  VV      ++L   LC A 
Sbjct: 400 CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAG 459

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            + +A  +  EMM +G  P   T++ ++  LC   K+D A  L + M    V P+ FTY+
Sbjct: 460 KFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYT 519

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+D FC  G + +A + F  M   GC  + V+Y  LI+ Y K +++  A  L+  M+S+
Sbjct: 520 ILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE 579

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS----------------TY 229
           G  P VVTY  L  G  +  Q+E A +++  M+ +    D                  TY
Sbjct: 580 GCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTY 639

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
              +DGLCK   + EA +L   + +  CE +   Y+ LIDG CK G+L+ A  +F  +  
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
           R    +V TY+ +I  L  D ++D A  +   M EN+ APNVII+  +I G  ++ K  +
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDE 759

Query: 350 VIELLHKMKEKKVMPDASIVSMVVD 374
              L+  M+EK   P+    + ++D
Sbjct: 760 AYRLMSMMEEKGCHPNVVTYTAMID 784



 Score =  193 bits (491), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 186/354 (52%), Gaps = 18/354 (5%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G +  PN  TY  ++DGLCK   V +A+ L   M  E   P+ + Y++LI G C     +
Sbjct: 629 GNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLD 688

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA+ +F +M ++G  P+V T++ ++D L K+ ++D A ++L  M++    PN   Y+ ++
Sbjct: 689 EAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMI 748

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C  GK + A  L   ME  GC  + V+Y  +I+G+ K  +V++ L L R+M +KG  
Sbjct: 749 DGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCA 808

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  VTY  L         ++ A +L +EM++       + Y   I+G  +        E 
Sbjct: 809 PNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNR--------EF 860

Query: 249 FRTLGILKCELD-------IQAYNCLIDGLCKSGRLEIALELFRSLPR--RVLVADVVTY 299
             +LG+L  E+        I AY  LID  CK+GRLE+ALEL + +        AD   Y
Sbjct: 861 IISLGLLD-EIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLY 919

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
           + +I  L    ++DKA +L+ DM +    P + IF  L+ G +RIN+  + ++L
Sbjct: 920 SSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 179/421 (42%), Gaps = 57/421 (13%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTY------------------ 54
           K +TV Y  +I GLC+    ++A     +M+  +  P+VVTY                  
Sbjct: 296 KLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKR 355

Query: 55  -----------------NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
                            NSLIH  C + D++ A +L  +M D G QP  V +N+++  +C
Sbjct: 356 ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC 415

Query: 98  KNGKMDE------ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
            N K+        A +    M+   V  N    S L    C  GK  +A  +   M S G
Sbjct: 416 GNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKG 475

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
              D  +Y+ +I   C   +V+ A  L+ EM S  + P V TY  L     ++  ++ A 
Sbjct: 476 FIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQAR 535

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           K F+EM RD  A +  TY   I    K   +  A ELF  +    C  ++  Y  LIDG 
Sbjct: 536 KWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595

Query: 272 CKSGRLEIALELFRSLPRRVLVADV----------------VTYNIMIHGLCNDGQMDKA 315
           CKSG++E A +++  +     + DV                 TY  ++ GLC   ++ +A
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEA 655

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
            DL   M      PN I++  LI GF ++ K  +   +  KM E+   P+    S ++D 
Sbjct: 656 RDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDR 715

Query: 376 L 376
           L
Sbjct: 716 L 716



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 179/414 (43%), Gaps = 60/414 (14%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           T    +  LCK G   +A AL   ++ E    D V Y  +I GLC A+ + EA      M
Sbjct: 269 TLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRM 325

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
                 P+VVT+ +++    +  ++    R+L +M+     P+   +++L+  +C +G  
Sbjct: 326 RSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDY 385

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV------------------------- 172
           + A +L   M   GC+   V YNILI G C N+++                         
Sbjct: 386 SYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNK 445

Query: 173 ----------------EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
                           E+A S+ REM+SKG  P   TY+ +   L    +V++A  LFEE
Sbjct: 446 VNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEE 505

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M+ + V  D  TY   ID  CK G + +A + F  +    C  ++  Y  LI    K+ +
Sbjct: 506 MKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK 565

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA---------- 326
           +  A ELF  +     + +VVTY  +I G C  GQ++KA  ++  M  NA          
Sbjct: 566 MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFK 625

Query: 327 ------VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
                   PN+  +  L+ G  + +K  +  +LL  M  +   P+  +   ++D
Sbjct: 626 IDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALID 679



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/398 (22%), Positives = 149/398 (37%), Gaps = 83/398 (20%)

Query: 54  YNSLIHGL-CHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG----KMDEASRL 108
           Y++L+  L C  ND    ++   E+ D+  +      NV++ + C+NG     ++E  RL
Sbjct: 165 YHALLEVLGCGGND-RVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRL 223

Query: 109 LDLMVQRDVRPNAFTYSTL--------------------------MDGFCLT------GK 136
            DL      +P+  TY+ L                          MDG+ L        K
Sbjct: 224 KDL----GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCK 279

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
             R  E    +E    K D V Y  +I+G C+    EEA+     M S    P VVTY  
Sbjct: 280 AGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRI 339

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G     Q+    ++   M  +        +N+ I   C++G    A +L + +G   
Sbjct: 340 LLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCG 399

Query: 257 CELDIQAYNCLIDG-----------------------------------------LCKSG 275
           C+     YN LI G                                         LC +G
Sbjct: 400 CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAG 459

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
           + E A  + R +  +  + D  TY+ +I  LCN  ++D A  LF +M+ N V P+V  + 
Sbjct: 460 KFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYT 519

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            LI  F ++    +  +   +M      P+    + ++
Sbjct: 520 ILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 200/397 (50%), Gaps = 37/397 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  +Y+T+I+ L K G +D A  LF +M    + PDV  YN LI G     D   A  
Sbjct: 181 KPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAME 240

Query: 73  LFFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           L+  ++ D  V P+V T N+++  L K G++D+  ++ + M Q +   + +TYS+L+ G 
Sbjct: 241 LWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGL 300

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +++AE +F  ++      D V+YN ++ G+C+  +++E+L L+R M  K     +
Sbjct: 301 CDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNI 359

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+YN L  GL E  +++ A  ++  M     AAD +TY  FI GLC NGY+ +A+ + + 
Sbjct: 360 VSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQE 419

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV--------------LVAD-- 295
           +      LD+ AY  +ID LCK  RLE A  L + + +                L+ D  
Sbjct: 420 VESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479

Query: 296 -------------------VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
                              VV+YNI+I GLC  G+  +A     +M EN   P++  +  
Sbjct: 480 LGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSI 539

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           L+ G  R  K    +EL H+  +  +  D  + ++++
Sbjct: 540 LLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILI 576



 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 188/348 (54%), Gaps = 1/348 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY+++I GLC  G VDKA+++F ++     + DVVTYN+++ G C      E+  L+  +
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW-RI 350

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           M+     ++V++N+++  L +NGK+DEA+ +  LM  +    +  TY   + G C+ G +
Sbjct: 351 MEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYV 410

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           N+A  +   +ES G   D  +Y  +I+  CK K +EEA +L +EM   G++      N L
Sbjct: 411 NKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNAL 470

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL    ++  A     EM ++       +YN  I GLCK G   EA    + +     
Sbjct: 471 IGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGW 530

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           + D++ Y+ L+ GLC+  ++++ALEL+    +  L  DV+ +NI+IHGLC+ G++D A  
Sbjct: 531 KPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMT 590

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +  +ME      N++ + TL+ GF ++   ++   +   M +  + PD
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPD 638



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 195/367 (53%), Gaps = 3/367 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKG-ENINPDVVTYNSLIHGLCHANDWNEA 70
           CK +     ++I    K    D+A  +F +M+      P + +YN+L++    A  W + 
Sbjct: 74  CKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKV 133

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           + LF      GV P++ T+NV++   CK  + ++A   LD M +   +P+ F+YST+++ 
Sbjct: 134 ESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIND 193

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY-REMVSKGIKP 189
               GK++ A ELF  M   G   D   YNILI+G+ K K+ + A+ L+ R +    + P
Sbjct: 194 LAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYP 253

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V T+N +  GL +  +V+  LK++E M++++   D  TY++ I GLC  G + +A  +F
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVF 313

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             L   K  +D+  YN ++ G C+ G+++ +LEL+R +  +  V ++V+YNI+I GL  +
Sbjct: 314 NELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLEN 372

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++D+A  ++  M     A +   +   IHG       +K + ++ +++      D    
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432

Query: 370 SMVVDLL 376
           + ++D L
Sbjct: 433 ASIIDCL 439



 Score =  160 bits (405), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 160/328 (48%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V+YN +I GL + G +D+A  ++  M  +    D  TY   IHGLC     N+A  + 
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            E+   G    V  +  I+D LCK  +++EAS L+  M +  V  N+   + L+ G    
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            ++  A      M   GC+   VSYNILI G CK  +  EA +  +EM+  G KP + TY
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTY 537

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + L  GL    +++ AL+L+ +  +  +  D   +N  I GLC  G + +A+ +   +  
Sbjct: 538 SILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C  ++  YN L++G  K G    A  ++  + +  L  D+++YN ++ GLC    +  
Sbjct: 598 RNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSY 657

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           A + F D   + + P V  +  L+   V
Sbjct: 658 AMEFFDDARNHGIFPTVYTWNILVRAVV 685



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 147/294 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +  TY   I GLC  G+V+KA  +  +++    + DV  Y S+I  LC      EA  L 
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM   GV+ +    N ++  L ++ ++ EAS  L  M +   RP   +Y+ L+ G C  
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKA 512

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK   A      M   G K D  +Y+IL+ G C++++++ AL L+ + +  G++  V+ +
Sbjct: 513 GKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMH 572

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L  GL  + +++ A+ +   M+  +  A+  TYNT ++G  K G    A  ++  +  
Sbjct: 573 NILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYK 632

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           +  + DI +YN ++ GLC    +  A+E F       +   V T+NI++  + N
Sbjct: 633 MGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 104/186 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P  V+YN +I GLCK G   +A A   +M      PD+ TY+ L+ GLC     + A 
Sbjct: 495 CRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLAL 554

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L+ + +  G++  V+  N+++  LC  GK+D+A  ++  M  R+   N  TY+TLM+GF
Sbjct: 555 ELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGF 614

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G  NRA  ++G M  MG + D +SYN ++ G C  + V  A+  + +  + GI PTV
Sbjct: 615 FKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTV 674

Query: 192 VTYNTL 197
            T+N L
Sbjct: 675 YTWNIL 680



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 4/257 (1%)

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHD-DVSYNILINGYCKNKEVEEALSL 178
           +A  Y  ++     T  +N    +   + S  CK D DV+ ++ I  Y KN   ++AL +
Sbjct: 42  SAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSV-IKTYGKNSMPDQALDV 100

Query: 179 YREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           ++ M    G +P + +YNTL     E  Q      LF   +   VA +  TYN  I   C
Sbjct: 101 FKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSC 160

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           K     +A      +     + D+ +Y+ +I+ L K+G+L+ ALELF  +  R +  DV 
Sbjct: 161 KKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVT 220

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLD-MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
            YNI+I G   +     A +L+   +E+++V PNV     +I G  +  +    +++  +
Sbjct: 221 CYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWER 280

Query: 357 MKEKKVMPDASIVSMVV 373
           MK+ +   D    S ++
Sbjct: 281 MKQNEREKDLYTYSSLI 297



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 80/153 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY+ ++ GLC++  +D A  L+ Q     +  DV+ +N LIHGLC     ++A  
Sbjct: 531 KPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMT 590

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M  +    ++VT+N +M+   K G  + A+ +   M +  ++P+  +Y+T+M G C
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLC 650

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILING 165
           +   ++ A E F    + G      ++NIL+  
Sbjct: 651 MCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 1/190 (0%)

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G   + V Y+ +   L E   V H  ++ E ++  +   D     + I    KN    +A
Sbjct: 38  GYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQA 97

Query: 246 VELFRTLG-ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           +++F+ +  I  CE  I++YN L++   ++ +      LF       +  ++ TYN++I 
Sbjct: 98  LDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIK 157

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
             C   + +KA      M +    P+V  + T+I+   +  K    +EL  +M E+ V P
Sbjct: 158 MSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAP 217

Query: 365 DASIVSMVVD 374
           D +  ++++D
Sbjct: 218 DVTCYNILID 227



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 49/82 (59%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  N VTYNT+++G  K G  ++A  ++  M    + PD+++YN+++ GLC     + A 
Sbjct: 600 CTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAM 659

Query: 72  RLFFEMMDQGVQPSVVTFNVIM 93
             F +  + G+ P+V T+N+++
Sbjct: 660 EFFDDARNHGIFPTVYTWNILV 681


>gi|302808035|ref|XP_002985712.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
 gi|300146621|gb|EFJ13290.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
          Length = 447

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 184/353 (52%), Gaps = 7/353 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V+Y  ++ G CK G   +A  L  +MK   + P+VV + ++I GLC A   ++A  L 
Sbjct: 29  NEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQA-LLH 87

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
           F  + +   P+V T++ ++D LCK+G+  EA  L+  MV++   PN  TY+ L+DGF   
Sbjct: 88  FRRIGEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKL 147

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            +++    L   M   GC+ D ++Y ++++ +CKN  ++EA  L   +     K  VVTY
Sbjct: 148 ERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALE----KRNVVTY 203

Query: 195 NTLFLGL--FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           N+LF  L   E  +   AL L E+M ++    +   Y T +  LCKN  + EA ++  ++
Sbjct: 204 NSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSM 263

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C+ D  +Y  L+     +GR   +LEL   +     + D  T N++IH  C  G +
Sbjct: 264 YSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDL 323

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +AH LF  M +    P+ + + TLI  F +  +P   ++LLH+M +    P+
Sbjct: 324 HEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPN 376



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 177/356 (49%), Gaps = 9/356 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V + TII GLC  G V +A   F ++ GE+  P+V TY++L+  LC +   +EA  
Sbjct: 62  RPNVVIHTTIIRGLCTAGKVSQALLHFRRI-GEDCAPNVYTYSTLVDALCKSGQPHEAYG 120

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+ +G  P+VVT+N ++D   K  ++DE   LL  M QR  R +  TY+ ++D FC
Sbjct: 121 LVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFC 180

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGY--CKNKEVEEALSLYREMVSKGIKPT 190
               I+ A  L  ++E    K + V+YN L       +     EALSL  +M+ +G +P 
Sbjct: 181 KNNSIDEAYRLLNALE----KRNVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPN 236

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF- 249
            V Y T+ L L +  +++ A ++   M       D  +Y   +      G   +++EL  
Sbjct: 237 QVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLG 296

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           R LG     LD +  N +I   CK+G L  A +LF+S+ +R  +   VTYN +I   C  
Sbjct: 297 RMLGSGYI-LDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKA 355

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            Q D A  L   M +    PNVI + ++I  F R  +  +   +   M +    PD
Sbjct: 356 QQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPD 411



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 167/334 (50%), Gaps = 8/334 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            IG  C PN  TY+T++D LCK G   +A  L  +M  +  +P+VVTYN+LI G      
Sbjct: 90  RIGEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLER 149

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            +E   L  EM  +G +  V+T+ +I+D  CKN  +DEA RLL+ + +R    N  TY++
Sbjct: 150 LDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR----NVVTYNS 205

Query: 127 LMDGFCLTGKINRAEELFGSMESM---GCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           L      T + +R  E    +E M   G + + V+Y  ++   CKN  ++EA  +   M 
Sbjct: 206 LFTALS-TAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMY 264

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
           S+G K   V+Y  L +      +   +L+L   M       DT T N  I   CK G + 
Sbjct: 265 SQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLH 324

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           EA +LF+++           YN LI   CK+ + + A++L   + +     +V+TYN +I
Sbjct: 325 EAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSII 384

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
              C + + ++A  +F  M +N   P+ + + TL
Sbjct: 385 KSFCREQREEEARGIFQMMVDNGCFPDRVSYTTL 418



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 94/188 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V Y T++  LCK   +D+A  + L M  +    D V+Y  L+    +A    ++  
Sbjct: 234 RPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLE 293

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+  G      T NV++ + CK G + EA +L   M QR   P+  TY+TL+  FC
Sbjct: 294 LLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGAFC 353

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              + + A +L   M     K + ++YN +I  +C+ +  EEA  +++ MV  G  P  V
Sbjct: 354 KAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPDRV 413

Query: 193 TYNTLFLG 200
           +Y TL L 
Sbjct: 414 SYTTLKLS 421



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 1/205 (0%)

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
           +  +K   +    YR  +        V+Y  L  G  +  + + AL+L +EM+ + V  +
Sbjct: 5   FVDSKRHRDGYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPN 64

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
              + T I GLC  G + +A+  FR +G   C  ++  Y+ L+D LCKSG+   A  L  
Sbjct: 65  VVIHTTIIRGLCTAGKVSQALLHFRRIG-EDCAPNVYTYSTLVDALCKSGQPHEAYGLVT 123

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            + ++    +VVTYN +I G     ++D+   L  +M +     +VI +  ++  F + N
Sbjct: 124 EMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNN 183

Query: 346 KPSKVIELLHKMKEKKVMPDASIVS 370
              +   LL+ ++++ V+   S+ +
Sbjct: 184 SIDEAYRLLNALEKRNVVTYNSLFT 208



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 79/154 (51%), Gaps = 1/154 (0%)

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
           A +  +Y   + G CK G   +A+EL   +       ++  +  +I GLC +G++  AL 
Sbjct: 27  AVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALL 86

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
            FR +       +V TY+ ++  LC  GQ  +A+ L  +M +   +PNV+ +  LI GF 
Sbjct: 87  HFRRIGEDC-APNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFR 145

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           ++ +  +V+ LL +M ++    D    +M++D+ 
Sbjct: 146 KLERLDEVLMLLKEMSQRGCRADVITYTMILDIF 179


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 200/400 (50%), Gaps = 40/400 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T  YN++I GL K   +D+A++  L+M      PD  TY + I G   A ++  A + 
Sbjct: 488 PDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKY 547

Query: 74  FFEMMDQGVQPSVV-----------------------------------TFNVIMDELCK 98
             EM++ GV P+ V                                   T+ V+M+ L K
Sbjct: 548 VKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVK 607

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           NGK+++A  +   M  + + P+ F+Y TL+DGF   G + +A  +F  M   G   + + 
Sbjct: 608 NGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVII 667

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN+L+ G+C++ E+E+A  L  EM  KG  P  VTY T+  G  +   +  A +LF+EM+
Sbjct: 668 YNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMK 727

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +  D+  Y T +DG C+   +  A+ +F T     C      +N LI+ + K G+ E
Sbjct: 728 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFET-NEKGCASSSAPFNALINWVFKFGKTE 786

Query: 279 IALELFRSLP----RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           +  ++   L      +    + VTYNIMI  LC +G ++ A +LF  M++  + P VI +
Sbjct: 787 LTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITY 846

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +L++G+ ++ + S++  +  ++    + PD  + S++++
Sbjct: 847 TSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIIN 886



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 169/338 (50%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY T + G+C  G +D A  +  +M      P+VV Y +LI      + + +A R+  EM
Sbjct: 422 TYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEM 481

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
            +QG+ P    +N ++  L K  KMDEA   L  MV+   +P+AFTY   + G+   G+ 
Sbjct: 482 REQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEF 541

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A++    M   G   + V    LIN YCK  +V EA S +R MV +GI     TY  L
Sbjct: 542 ASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVL 601

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL +  +V  A ++F EM+   +A D  +Y T IDG  K G + +A  +F  +     
Sbjct: 602 MNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGL 661

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             ++  YN L+ G C+SG +E A EL   +  +    + VTY  +I G C  G + +A  
Sbjct: 662 TSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQ 721

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           LF +M+   + P+  ++ TL+ G  R+N   + I +  
Sbjct: 722 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFE 759



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 193/371 (52%), Gaps = 11/371 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E GV+  PN V    +I+  CK+G V +A + F  M  + I  D  TY  L++GL     
Sbjct: 553 ECGVI--PNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGK 610

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            N+A+ +F EM  +G+ P V ++  ++D   K G M +AS + D MVQ  +  N   Y+ 
Sbjct: 611 VNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNM 670

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ GFC +G+I +A+EL   M   G   + V+Y  +I+GYCK+ ++ EA  L+ EM  KG
Sbjct: 671 LLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKG 730

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P    Y TL  G   ++ VE A+ +FE  ++   A+ ++ +N  I+ + K G      
Sbjct: 731 LVPDSFVYTTLVDGCCRLNDVERAITIFETNEKG-CASSSAPFNALINWVFKFGKTELTT 789

Query: 247 ELFRTLGILKCELDI------QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
           ++   L  +    D         YN +ID LCK G LE A ELF  + +  L+  V+TY 
Sbjct: 790 DMINRL--MDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYT 847

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +++G    G+  +   +F ++    + P+ I++  +I+ F++    +K + LL +M  K
Sbjct: 848 SLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAK 907

Query: 361 KVMPDASIVSM 371
             + D   +S+
Sbjct: 908 NAVDDGCKLSI 918



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 167/359 (46%), Gaps = 6/359 (1%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           Y+  I  + KEG ++KAKALF  M    + P    Y SLI G     +  +   L  E+ 
Sbjct: 353 YDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIK 412

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            + +  S  T+   +  +C +G +D A  ++  M     RPN   Y+TL+  F    +  
Sbjct: 413 KRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFG 472

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A  +   M   G   D   YN LI G  K K+++EA S   EMV  G KP   TY    
Sbjct: 473 DAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFI 532

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GIL 255
            G  E  +   A K  +EM    V  +       I+  CK G ++EA   FR++   GIL
Sbjct: 533 SGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGIL 592

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
               D + Y  L++GL K+G++  A E+F  +  + +  DV +Y  +I G    G M KA
Sbjct: 593 G---DAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKA 649

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +F +M +  +  NVII+  L+ GF R  +  K  ELL +M  K   P+A     ++D
Sbjct: 650 SSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIID 708



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 158/348 (45%), Gaps = 45/348 (12%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +Y T+IDG  K G + KA ++F +M    +  +V+ YN L+ G C + +  +AK L
Sbjct: 628 PDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKEL 687

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G  P+ VT+  I+D  CK+G + EA +L D M  + + P++F Y+TL+DG C 
Sbjct: 688 LDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCR 747

Query: 134 TGKINRAEELF---------------------------------------GSMESMGCKH 154
              + RA  +F                                       GS +  G K 
Sbjct: 748 LNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFG-KP 806

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           +DV+YNI+I+  CK   +E A  L+  M    + PTV+TY +L  G  ++ +      +F
Sbjct: 807 NDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVF 866

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK-----CELDIQAYNCLID 269
           +E+    +  D   Y+  I+   K G   +A+ L   +         C+L I     L+ 
Sbjct: 867 DEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLS 926

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           G  K G +E+A ++  ++ R   + D  T   +I+  C       A D
Sbjct: 927 GFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRMAAD 974



 Score =  134 bits (336), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 169/349 (48%), Gaps = 16/349 (4%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENIN--PDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           +  +IDG  ++GF+D+A  +F   K  +++  P +   N L+  L   N  +    ++  
Sbjct: 155 FGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKG 214

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M+++ V   V ++ +++   C++G +  A    D++++ +      T +           
Sbjct: 215 MVERNVVFDVQSYEMLIGAHCRDGNVQLAK---DVLLKTEEELGTATLN----------- 260

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           ++ A EL  SM   G      SYN+LI+G CK K +E+A SL  EM S G+    V Y+ 
Sbjct: 261 VDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSI 320

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  GL +    + A  L  EM     + D   Y+ FI  + K G + +A  LF  +    
Sbjct: 321 LIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFG 380

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
                +AY  LI+G  +   +    EL   + +R +V    TY   + G+C+ G +D A+
Sbjct: 381 VTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAY 440

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++  +M  +   PNV+I+ TLI  F++ ++    + +L +M+E+ + PD
Sbjct: 441 NIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPD 489



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/382 (23%), Positives = 168/382 (43%), Gaps = 21/382 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+    N ++D L K   +D    ++  M   N+  DV +Y  LI   C   +   AK +
Sbjct: 187 PSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDV 246

Query: 74  FFE---------------------MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM 112
             +                     M  +G+ PS  ++N+++D LCK  ++++A  LL  M
Sbjct: 247 LLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEM 306

Query: 113 VQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
               +  +   YS L+DG       + A  L   M S G   D + Y+  I    K   +
Sbjct: 307 NSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAM 366

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           E+A +L+  M++ G+ P    Y +L  G F    V    +L  E+++ ++     TY T 
Sbjct: 367 EKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTA 426

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           + G+C +G +  A  + + +G   C  ++  Y  LI    +  R   A+ + + +  + +
Sbjct: 427 VKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGI 486

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
             D   YN +I GL    +MD+A    L+M EN   P+   +   I G++   + +   +
Sbjct: 487 APDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADK 546

Query: 353 LLHKMKEKKVMPDASIVSMVVD 374
            + +M E  V+P+  + + +++
Sbjct: 547 YVKEMLECGVIPNKVLCTGLIN 568



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 5/168 (2%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           +G      KPN VTYN +ID LCKEG ++ AK LF  M+  N+ P V+TY SL++G    
Sbjct: 797 DGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKM 856

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV-----RP 119
              +E   +F E++  G++P  + ++VI++   K G   +A  LLD M  ++      + 
Sbjct: 857 GRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKL 916

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
           +  T   L+ GF   G++  AE++  +M  +    D  +   LIN  C
Sbjct: 917 SISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESC 964


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 196/397 (49%), Gaps = 35/397 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+   YN +I G CK   ++ A  +  +MK     PD+VTYN +I  LC+      A  
Sbjct: 144 EPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALT 203

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +++     P+V+T+ ++++     G ++EA +LL+ M+ R + P+ +TY+ ++ G C
Sbjct: 204 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 263

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G + RA EL  S+ S GC+ D +SYNIL+  +    + +E   L  EM S+G +P  V
Sbjct: 264 KEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKV 323

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY----------------------- 229
           TY+ L   L    +++ A+ + + M   ++  DT +Y                       
Sbjct: 324 TYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYM 383

Query: 230 ------------NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
                       NT +  LCKNG   +A+E+F  L  + C  ++ +YN +I  L   G  
Sbjct: 384 ISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDR 443

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             AL +  ++  + +  D +TYN +I  LC DG +++A  L  DME++   P VI +  +
Sbjct: 444 SRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIV 503

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + G  ++ +    I +  +M EK   P+ +   ++++
Sbjct: 504 LLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIE 540



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 172/356 (48%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  +TY  +I+    EG +++A  L  +M    + PD+ TYN++I G+C       A 
Sbjct: 213 CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAA 272

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   +  +G +P V+++N+++      GK DE  +L+  M  R   PN  TYS L+   
Sbjct: 273 ELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSL 332

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+I+ A  +   M       D  SY+ LI+  CK   ++ A+ +   M+S G  P +
Sbjct: 333 CRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 392

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YNT+   L +      AL++F +++      + S+YNT I  L   G    A+ +   
Sbjct: 393 VNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPA 452

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D   YN LI  LC+ G +E A+ L   + +      V++YNI++ GLC   +
Sbjct: 453 MISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRR 512

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           +D A  +F +M E    PN   ++ LI G       ++ +EL + +  + V+   S
Sbjct: 513 IDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDS 568



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 171/352 (48%), Gaps = 1/352 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ +    +I G      ++KA  + +++   +  PDV  YN++I G C  N    A ++
Sbjct: 111 PDVILCTKLIKGFFNFKNIEKASRV-MEILESHTEPDVFAYNAVISGFCKVNQIEAATQV 169

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +G  P +VT+N+++  LC   K+  A  +LD ++  +  P   TY+ L++   +
Sbjct: 170 LNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIV 229

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G IN A +L   M + G   D  +YN +I G CK   VE A  L   + SKG +P V++
Sbjct: 230 EGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVIS 289

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L        + +   KL  EM       +  TY+  I  LC+ G I EA+ + + + 
Sbjct: 290 YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI 349

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +   D  +Y+ LI  LCK GRL++A+ +   +     + D+V YN ++  LC +G  +
Sbjct: 350 EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNAN 409

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A ++F  +      PNV  + T+I         S+ + ++  M  K + PD
Sbjct: 410 QALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPD 461



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 166/355 (46%), Gaps = 36/355 (10%)

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
           L++  C A  +NE+      ++++G  P V+    ++        +++ASR+++++ +  
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEIL-ESH 142

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
             P+ F Y+ ++ GFC   +I  A ++   M++ G   D V+YNI+I   C  +++  AL
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           ++  +++     PTV+TY  L         +  A+KL EEM    +  D  TYN  I G+
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYN------------------------------- 265
           CK G +  A EL  +L    CE D+ +YN                               
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322

Query: 266 ----CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
                LI  LC+ GR++ A+ + + +  + L  D  +Y+ +I  LC +G++D A  +   
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 382

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           M  N   P+++ + T++    +    ++ +E+ +K++     P+ S  + ++  L
Sbjct: 383 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 437



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 77/141 (54%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G+ C PN  +YNT+I  L   G   +A  +   M  + I+PD +TYNSLI  LC      
Sbjct: 420 GMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVE 479

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  L  +M   G +P+V+++N+++  LCK  ++D+A  +   M+++  RPN  TY  L+
Sbjct: 480 EAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLI 539

Query: 129 DGFCLTGKINRAEELFGSMES 149
           +G    G    A EL  S+ S
Sbjct: 540 EGIGFAGWRTEAMELANSLFS 560


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 187/383 (48%), Gaps = 13/383 (3%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N  +   C PN  TYN ++DGLCK+G    A  +F +M    I P+V  Y  L+  LC+A
Sbjct: 196 NRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNA 255

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
              +EA +L   M D+G  P  VT+N  +  LCK G+++EA + L ++           Y
Sbjct: 256 GKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGY 315

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           S L+DG     + +     + +M       D V Y I+I G  +   +E+ALS    M  
Sbjct: 316 SCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKK 375

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           KG  P    YNT+   L +   +E A  L  EM ++++  D++T    I GLCK G + E
Sbjct: 376 KGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDE 435

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL-----PRRVL------- 292
           A+++F  +G   C+  +  YN LIDG  + GRLE A  LF  +     P   L       
Sbjct: 436 AMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGAN 495

Query: 293 -VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
            V D  +   ++H +C  GQ+ KA+ L   + ++ V P+V+ + TLI+G  +       +
Sbjct: 496 QVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAV 555

Query: 352 ELLHKMKEKKVMPDASIVSMVVD 374
            L  +++ K + PD      ++D
Sbjct: 556 RLFKELQLKGISPDEITYGTLID 578



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 187/363 (51%), Gaps = 13/363 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYN  + GLCK G V++A    + ++       +  Y+ LI GL  A  ++E  
Sbjct: 273 CLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGF 332

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             +  M+++ + P VV + +++    + G++++A   LD+M ++   P+ F Y+T++   
Sbjct: 333 GYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVL 392

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + RA  L   M       D  +  I+I G CK   V+EA+ ++ EM   G  PTV
Sbjct: 393 CDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTV 452

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQ---------RDDVAA----DTSTYNTFIDGLCK 238
           +TYN L  G +   ++E A  LF +M+         R  + A    D+ +    +  +C+
Sbjct: 453 MTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQ 512

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           +G +++A +L R++       D+  YN LI+GLCK+  L+ A+ LF+ L  + +  D +T
Sbjct: 513 SGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEIT 572

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y  +I GL    + + A  LF ++ ++  +P++ I+ +++    R+ K S+ I L     
Sbjct: 573 YGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYL 632

Query: 359 EKK 361
            KK
Sbjct: 633 PKK 635



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 165/357 (46%), Gaps = 51/357 (14%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T  YNT++  LC  G +++A  L  +M   N+  D  T   +I GLC     +EA ++
Sbjct: 380 PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQI 439

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL------ 127
           F EM + G  P+V+T+N ++D   + G+++EA R+L   ++    P+ F   TL      
Sbjct: 440 FDEMGEHGCDPTVMTYNALIDGFYREGRLEEA-RMLFHKMEMGNNPSLFLRLTLGANQVC 498

Query: 128 --------MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
                   +   C +G++ +A +L  S+   G   D V+YN LING CK + ++ A+ L+
Sbjct: 499 DSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLF 558

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
           +E+  KGI P  +TY TL  GL   H+   A+ LF+ + +   +   S YN+ +  LC+ 
Sbjct: 559 KELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRM 618

Query: 240 GYIVEAVELFRTLGILKCELDIQA------------------------------------ 263
             + +A+ L+      K    +++                                    
Sbjct: 619 KKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNP 678

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           Y   + GLC+  R + AL +F +L    +        ++I+ LC D  ++ A D+ L
Sbjct: 679 YTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIML 735



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 127/258 (49%)

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           G+  S   F  ++      G+  +A +    M +   RP AF Y+T++     +G I  A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
             L+  M + GC  +  +YN+L++G CK     +AL ++ EM+ +GI P V  Y  L   
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
           L    +++ A++L   M+      D  TYN F+ GLCK G + EA +    L      L 
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           ++ Y+CLIDGL ++ R +     ++++  R +  DVV Y IMI G    G+++ A     
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371

Query: 321 DMEENAVAPNVIIFVTLI 338
            M++    P+   + T++
Sbjct: 372 VMKKKGFVPDTFCYNTVL 389



 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 158/344 (45%), Gaps = 53/344 (15%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           ++ T   +I GLCK G VD+A  +F +M     +P V+TYN+LI G        EA R+ 
Sbjct: 416 DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEA-RML 474

Query: 75  FEMMDQGVQPSVV--------------TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           F  M+ G  PS+               +   ++ ++C++G++ +A +LL  ++   V P+
Sbjct: 475 FHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPD 534

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY+TL++G C    ++ A  LF  ++  G   D+++Y  LI+G  +     +A+ L++
Sbjct: 535 VVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQ 594

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF------------------------EE 216
            ++  G  P++  YN++   L  + ++  A+ L+                        E+
Sbjct: 595 NILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIED 654

Query: 217 MQRDDVAAD------------TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
              DD   +            ++ Y  ++ GLC+     +A+ +F TL     ++     
Sbjct: 655 GSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACC 714

Query: 265 NCLIDGLCKSGRLEIALE-LFRSLPRRVLVADVVTYNIMIHGLC 307
             LI+ LC    L  A++ +  +L + ++++  V  N ++  LC
Sbjct: 715 ALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVG-NRLLRWLC 757



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 114/257 (44%)

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           ++  ++ L+      G+   A + F  M+    +     YN ++     +  +  AL+LY
Sbjct: 136 SSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALY 195

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
             MV+ G  P   TYN L  GL +      ALK+F+EM    +  +   Y   +  LC  
Sbjct: 196 NRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNA 255

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G I EAV+L  ++    C  D   YN  + GLCK GR+  A +    L        +  Y
Sbjct: 256 GKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGY 315

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           + +I GL    + D+    +  M E  ++P+V+++  +I G     +    +  L  MK+
Sbjct: 316 SCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKK 375

Query: 360 KKVMPDASIVSMVVDLL 376
           K  +PD    + V+ +L
Sbjct: 376 KGFVPDTFCYNTVLKVL 392



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 38/246 (15%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GVV  P+ VTYNT+I+GLCK   +D A  LF +++ + I+PD +TY +LI GL  A+  N
Sbjct: 530 GVV--PDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREN 587

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCK------------------------------ 98
           +A  LF  ++  G  PS+  +N +M  LC+                              
Sbjct: 588 DAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLAN 647

Query: 99  ------NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
                 +G +D+  R L  + Q     ++  Y+  + G C   + + A  +F +++  G 
Sbjct: 648 AHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGI 707

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
                   +LIN  C ++ +  A+ +    +SK I  +    N L   L   ++ + A  
Sbjct: 708 DITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQA 767

Query: 213 LFEEMQ 218
           L   M 
Sbjct: 768 LAWRMH 773



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 70/161 (43%)

Query: 205 HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
           H  E       + +   + A +S +   +      G   +AV+ F  +   +       Y
Sbjct: 116 HADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVY 175

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
           N ++  L  SG + +AL L+  +       +  TYN+++ GLC  G    A  +F +M +
Sbjct: 176 NTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLD 235

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             + PNV I+  L+       K  + ++LL  MK+K  +PD
Sbjct: 236 RGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPD 276


>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
 gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
          Length = 810

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 187/365 (51%), Gaps = 9/365 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN +T+  II  LC+ G  D+A  +  QM        V+ YN +I  L       EA 
Sbjct: 234 CPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEEAL 293

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF +M     +P + ++N +M  LC++G+ ++A  L+  MV++D  P+  T++T++   
Sbjct: 294 HLFDQM---PCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYL 350

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G ++ A E+   M   GCK D+ +Y+ L+N   +   V++AL L R +     KP  
Sbjct: 351 CHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTI---PWKPNT 407

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V Y ++  GL    + +   KL  EM R+ +  D  T+   ID LC+ G +    E+ R 
Sbjct: 408 VCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLRE 467

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  DI  YN LI+G  ++G ++ ALELF+++  +    +VVTYN M+ GLC   Q
Sbjct: 468 MTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNMSCK---RNVVTYNYMLKGLCRAEQ 524

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            + A  L  +M ++   PN + F TLI    +       IE+  KM +   MP+  I S 
Sbjct: 525 WEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYST 584

Query: 372 VVDLL 376
           +++ L
Sbjct: 585 LINGL 589



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 193/346 (55%), Gaps = 9/346 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+  TY+ +++ L + G VD A  L   +  +   P+ V Y S++ GLC A+ W++  
Sbjct: 371 CKPDNFTYSALVNALSERGCVDDALELLRTIPWK---PNTVCYRSVLKGLCRADRWDDVG 427

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  EM+   +    VTF +I+D LC+ G +D  + +L  M +    P+   Y++L++GF
Sbjct: 428 KLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGF 487

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G ++ A ELF   ++M CK + V+YN ++ G C+ ++ E+A  L  EMV     P  
Sbjct: 488 SENGSVDDALELF---KNMSCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNE 544

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT++TL   L +   VE A+++FE+M + +   +   Y+T I+GL     + +A++L   
Sbjct: 545 VTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKL--- 601

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L  + C+ D   Y+  + GLC++ R E A EL   + R+  + D VT++I+I+ LC+ G 
Sbjct: 602 LNDMPCKPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGF 661

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           ++ A ++   M +    PNV I+ +LI+GF    +    ++LL  M
Sbjct: 662 LESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNM 707



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 181/347 (52%), Gaps = 9/347 (2%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + VTYNT++ G C+EG ++ A+ L   M      P+  T ++L+ GLC   +W++A+ L 
Sbjct: 170 DVVTYNTLVAGYCREGRLNDARRLVADMP---FAPNSYTNSTLLKGLCSNKEWDDAEELL 226

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+  G  P+ +TF +I+  LC+NG  D A  +LD M +         Y+ ++      
Sbjct: 227 SEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAEL 286

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G++  A  LF   + M CK D  SYN ++ G C++   E+A +L   MV K   P  VT+
Sbjct: 287 GRVEEALHLF---DQMPCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTF 343

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           NT+   L     V+ A+++ E+M +     D  TY+  ++ L + G + +A+EL RT+  
Sbjct: 344 NTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTIPW 403

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + +   Y  ++ GLC++ R +   +L   + R  L  D VT+ ++I  LC  G +D 
Sbjct: 404 ---KPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDY 460

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
             ++  +M +   +P++II+ +LI+GF         +EL   M  K+
Sbjct: 461 GAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNMSCKR 507



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 180/346 (52%), Gaps = 9/346 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ + YN++I+G  + G VD A  LF  M  +    +VVTYN ++ GLC A  W +A 
Sbjct: 473 CSPDIIIYNSLINGFSENGSVDDALELFKNMSCKR---NVVTYNYMLKGLCRAEQWEDAG 529

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  EM+     P+ VTF+ ++  LC+ G ++ A  + + M + +  PN   YSTL++G 
Sbjct: 530 KLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGL 589

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
                ++ A +L   +  M CK D + Y+  + G C+ +  E+A  L  EM+ K   P  
Sbjct: 590 SDQECVDDALKL---LNDMPCKPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDE 646

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT++ L   L     +E A ++ E M + +   +   Y++ I+G  +     +A++L R 
Sbjct: 647 VTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRN 706

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    CE D   Y+  + GLC++ R E A EL   + R+    D  T++++I  LC +G 
Sbjct: 707 M---PCEPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGL 763

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           +D A ++F  M     +PN  I  +L++G+    +  + ++LL  M
Sbjct: 764 VDMATEVFEQMSVYGCSPNRKIHSSLVNGYSEQRRVDEGLKLLSSM 809



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 147/277 (53%), Gaps = 6/277 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VT++T+I  LC++GFV+ A  +F +M   N  P+V+ Y++LI+GL      ++A 
Sbjct: 540 CLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDAL 599

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  +M     +P  + ++  +  LC+  + ++A  L+  M++++  P+  T+S L++  
Sbjct: 600 KLLNDM---PCKPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNL 656

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A E+   M    C  +   Y+ LING+ +    E+AL L R M     +P  
Sbjct: 657 CHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNM---PCEPDT 713

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           + Y+    GL    + E A +L  EM R     D +T++  I  LC+NG +  A E+F  
Sbjct: 714 ICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEVFEQ 773

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           + +  C  + + ++ L++G  +  R++  L+L  S+P
Sbjct: 774 MSVYGCSPNRKIHSSLVNGYSEQRRVDEGLKLLSSMP 810



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 145/302 (48%), Gaps = 9/302 (2%)

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT- 134
           E M    +P+ V   +++ +LC  G++D+A R+L    +R    +A T +TL+ G+C   
Sbjct: 92  ESMRDPERPAAVPCTLLIKKLCAAGRLDDAERVLG-ASERAGTADAVTRNTLVAGYCRAG 150

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G++  AE +  S+   G   D V+YN L+ GYC+   + +A  L  +M      P   T 
Sbjct: 151 GRLADAERMLASLALSG-SADVVTYNTLVAGYCREGRLNDARRLVADM---PFAPNSYTN 206

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           +TL  GL    + + A +L  EM R     +  T+   I  LC+NG    A+ +   +  
Sbjct: 207 STLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSK 266

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
            +C   +  YN +I  L + GR+E AL LF  +P +    D+ +YN ++ GLC DG+ + 
Sbjct: 267 CRCTRGVIVYNEIISCLAELGRVEEALHLFDQMPCK---PDIFSYNTVMKGLCRDGRWED 323

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  L   M      P+ + F T+I            +E++ +M +    PD    S +V+
Sbjct: 324 AGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVN 383

Query: 375 LL 376
            L
Sbjct: 384 AL 385


>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
 gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
           Japonica Group]
 gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
          Length = 551

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 184/364 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N + YN+++D   +E   D+   +   M+ E I P V TY  L+ GL  A D  + + 
Sbjct: 175 KVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEA 234

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM  + +   V  ++ +++  C+ G +  AS + D  V   + PN  TY  L++GFC
Sbjct: 235 VFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFC 294

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  AE L   M+  G   + + +N +I+GYC+   V++AL +   M   GI+  V 
Sbjct: 295 KIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVY 354

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GL   ++++ A  L   M    V  +  +Y T I   C  G +VEA  LFR +
Sbjct: 355 TYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREM 414

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                E  +  YN ++DG  K G +  A      + ++ LV D+ +Y  ++HG C +G++
Sbjct: 415 AGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKV 474

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  LF +M++    PN++ +  LI G  +  +  +  +L   M    + PD ++ S +
Sbjct: 475 DVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSAL 534

Query: 373 VDLL 376
           V  L
Sbjct: 535 VGSL 538



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 167/339 (49%), Gaps = 5/339 (1%)

Query: 30  GFVDKAKALFLQMKGENINPDVVTYNS---LIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           G +D A  L  Q       PD VT  S   ++ G C +     A++L  EM   GV+ + 
Sbjct: 121 GHLDTAADLLKQ--AATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNA 178

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
           + +N ++D   +    D  + +L +M    + P   TY+ L+DG      I + E +F  
Sbjct: 179 LCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEE 238

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M+S     D   Y+ +IN YC+   V  A  ++ E V  GI+P   TY  L  G  +I Q
Sbjct: 239 MKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQ 298

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           +E A  L  +MQ   V  +   +NT IDG C+   + +A+E+   +  +  ELD+  YN 
Sbjct: 299 MEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNT 358

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           L  GL ++ R++ A  L R +  + +  + V+Y  +I   CN+G M +A  LF +M  N 
Sbjct: 359 LACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 418

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             P+++ +  ++ G+++     +     ++M++K ++PD
Sbjct: 419 AEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPD 457



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 162/336 (48%), Gaps = 35/336 (10%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P   TY  ++DGL     + K +A+F +MK +N++ DV  Y+S+I+  C A +   A  
Sbjct: 210 EPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASE 269

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F E +  G++P+  T+  +++  CK G+M+ A  L+  M  R V  N   ++T++DG+C
Sbjct: 270 VFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYC 329

Query: 133 LTGKINRAEELFGSMESMGCKHD-----------------------------------DV 157
               +++A E+   ME MG + D                                    V
Sbjct: 330 RKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHV 389

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           SY  LI+ +C   ++ EA  L+REM   G +P++VTYN +  G  +   +  A +   EM
Sbjct: 390 SYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEM 449

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
           ++  +  D  +Y   + G C NG +  A+ LF  +     + ++ AY  LI GL K GR 
Sbjct: 450 EKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRS 509

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           E A +L+ ++    L  D   Y+ ++  L  D + +
Sbjct: 510 EEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQN 545



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 128/242 (52%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G   +PN  TY  +I+G CK G ++ A+ L   M+   +  + + +N++I G C  N  
Sbjct: 275 VGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMV 334

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A  +   M   G++  V T+N +   L +  +MDEA  LL +M+++ VRPN  +Y+TL
Sbjct: 335 DKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTL 394

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +   C  G +  A  LF  M   G +   V+YN++++GY K   + EA     EM  KG+
Sbjct: 395 ISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGL 454

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P + +Y  L  G     +V+ AL+LFEEM++     +   Y   I GL K G   EA +
Sbjct: 455 VPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQ 514

Query: 248 LF 249
           L+
Sbjct: 515 LY 516



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 85/185 (45%)

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           T ++ + +  G  +  +V HA +L +EM R  V  +   YN+ +D   +        E+ 
Sbjct: 142 TPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEML 201

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + +     E  +  Y  L+DGL  +  +     +F  +  + L  DV  Y+ +I+  C  
Sbjct: 202 KVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRA 261

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G + +A ++F +   N + PN   +  LI+GF +I +      L+  M+ + V  +  + 
Sbjct: 262 GNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVF 321

Query: 370 SMVVD 374
           + ++D
Sbjct: 322 NTMID 326



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 46/94 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +Y  ++ G C  G VD A  LF +MK     P++V Y +LI GL       EA +L
Sbjct: 456 PDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQL 515

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR 107
           +  M+  G+ P    ++ ++  L  + K +   R
Sbjct: 516 YDNMLGDGLTPDDALYSALVGSLHTDKKQNVKPR 549


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 179/366 (48%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C PN V YN +IDG C+ G V +   L  +M+ + + P VVTY +L+  L    D  
Sbjct: 287 GAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLE 346

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +   L  EM ++ + P+V  +N ++D LCK     +A  +L  M      P+A T+STL+
Sbjct: 347 KIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLI 406

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C  G++  AE L           +  SY  LI+G+C   EV  A +L  EM+ +G  
Sbjct: 407 SGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHT 466

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVT+  L  GL    QV  AL + E+M    +  D + YN  I GLCK   +  A  L
Sbjct: 467 PDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNL 526

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +       D   Y  LIDG  ++  L+ A ++F  + ++ +  DVV YN MI G C 
Sbjct: 527 IEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQ 586

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G M++A +    M +    P+   + TLI G+ +    S  + LL  M +++  P+   
Sbjct: 587 FGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVA 646

Query: 369 VSMVVD 374
            S +++
Sbjct: 647 YSSLIN 652



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 182/363 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTY T++  L ++G ++K  +L  +M+   + P+V  YNS+I  LC     ++A  +
Sbjct: 327 PTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVV 386

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   G  P  +TF+ ++  LC+ G++ EA RLL    + ++ PN  +Y++L+ GFC+
Sbjct: 387 LKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCV 446

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A  L   M   G   D V++  LI+G     +V EAL +  +M ++ + P    
Sbjct: 447 RGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANI 506

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  GL +   +  A  L EEM   +V  D   Y T IDG  +N  + EA ++F  + 
Sbjct: 507 YNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFME 566

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+  YN +I G C+ G +  A+E   ++ +   + D  TY  +I G    G + 
Sbjct: 567 QKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNIS 626

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L  DM +    PNV+ + +LI+G+ ++        L   M+ + + P+    ++++
Sbjct: 627 GALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILI 686

Query: 374 DLL 376
             L
Sbjct: 687 GSL 689



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 169/330 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +T++T+I GLC+EG V +A+ L  +     +NP++ +Y SLIHG C   +   A 
Sbjct: 395 CDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVAS 454

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EMM++G  P VVTF  ++  L   G++ EA  + + M  R + P+A  Y+ L+ G 
Sbjct: 455 NLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGL 514

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    +  A  L   M       D   Y  LI+G+ +N+ ++EA  ++  M  KGI P V
Sbjct: 515 CKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDV 574

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YN +  G  +   +  A++    M++     D  TY T I G  K G I  A+ L   
Sbjct: 575 VGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCD 634

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +C+ ++ AY+ LI+G CK G  + A  LF S+  + L  +V+TY I+I  L    +
Sbjct: 635 MMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDK 694

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           + +A   F  M  N  +PN     +L+ G 
Sbjct: 695 VVRAAMYFEYMLLNQCSPNDYTLHSLVTGL 724



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 176/363 (48%), Gaps = 1/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   YN++ID LCK     +A  +  QM     +PD +T+++LI GLC      EA+RL
Sbjct: 362 PNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERL 421

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             E     + P++ ++  ++   C  G++  AS LL  M++R   P+  T+  L+ G  +
Sbjct: 422 LRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVV 481

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A  +   M +     D   YN+LI+G CK K +  A +L  EM+ + + P    
Sbjct: 482 AGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYV 541

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G      ++ A K+FE M++  +  D   YN  I G C+ G + EAVE   T+ 
Sbjct: 542 YTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMR 601

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +    D   Y  LI G  K G +  AL L   + +R    +VV Y+ +I+G C  G  D
Sbjct: 602 KVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTD 661

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP-DASIVSMV 372
            A  LF  ME   + PNVI +  LI    + +K  +       M   +  P D ++ S+V
Sbjct: 662 AAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLV 721

Query: 373 VDL 375
             L
Sbjct: 722 TGL 724



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 167/349 (47%), Gaps = 2/349 (0%)

Query: 19  YNT--IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           Y+T  ++ GLC EG V+K   L     G    P+ V YN LI G C   D      L  E
Sbjct: 260 YSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGE 319

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M  +G+ P+VVT+  +M  L + G +++ + LL  M +R + PN   Y++++D  C    
Sbjct: 320 MEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRS 379

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
            ++A  +   M + GC  D ++++ LI+G C+   V+EA  L RE     + P + +Y +
Sbjct: 380 ASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTS 439

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G     +V  A  L  EM       D  T+   I GL   G + EA+ +   +   +
Sbjct: 440 LIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQ 499

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              D   YN LI GLCK   L  A  L   +  + +  D   Y  +I G   +  +D+A 
Sbjct: 500 LLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEAR 559

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +F  ME+  + P+V+ +  +I G+ +    ++ +E +  M++   +PD
Sbjct: 560 KIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPD 608



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 156/297 (52%)

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
            G  P     N ++  L +  + D+A +L D M+  +   + ++   ++ G CL G + +
Sbjct: 218 HGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEK 277

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
             +L  +    GC  + V YN+LI+GYC+  +V   + L  EM +KG+ PTVVTY TL  
Sbjct: 278 GLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMS 337

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
            L     +E    L  EM+   +  +   YN+ ID LCK     +A+ + + +    C+ 
Sbjct: 338 WLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDP 397

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           D   ++ LI GLC+ GR++ A  L R   R  L  ++ +Y  +IHG C  G++  A +L 
Sbjct: 398 DAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLL 457

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           ++M E    P+V+ F  LIHG V   + S+ + +  KM  ++++PDA+I ++++  L
Sbjct: 458 VEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGL 514



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 162/348 (46%), Gaps = 15/348 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+  +I GL   G V +A  +  +M    + PD   YN LI GLC       A+ L
Sbjct: 467 PDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNL 526

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM++Q V P    +  ++D   +N  +DEA ++ + M Q+ + P+   Y+ ++ G+C 
Sbjct: 527 IEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQ 586

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +N A E   +M  +G   D+ +Y  LI GY K   +  ALSL  +M+ +  +P VV 
Sbjct: 587 FGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVA 646

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y++L  G  ++   + A  LF  M+   +  +  TY   I  L K   +V A   F  + 
Sbjct: 647 YSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYML 706

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIA---------------LELFRSLPRRVLVADVVT 298
           + +C  +    + L+ GLC S    I+               L++FR+L           
Sbjct: 707 LNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSA 766

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           YN +I  LC    + +A DL   M      P+   F++L++GF  + K
Sbjct: 767 YNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGK 814



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 156/333 (46%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
           D A+ L+ +M  E    D  +   ++ GLC      +  +L       G  P+ V +NV+
Sbjct: 241 DDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
           +D  C+ G +     LL  M  + + P   TY TLM      G + +   L   M     
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
             +   YN +I+  CK +   +AL + ++M + G  P  +T++TL  GL +  +V+ A +
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAER 420

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
           L  E  R ++  + S+Y + I G C  G ++ A  L   +       D+  +  LI GL 
Sbjct: 421 LLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV 480

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
            +G++  AL +   +  R L+ D   YN++I GLC    +  A +L  +M E  V P+  
Sbjct: 481 VAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKY 540

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++ TLI GF+R     +  ++   M++K + PD
Sbjct: 541 VYTTLIDGFIRNESLDEARKIFEFMEQKGIHPD 573



 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 149/308 (48%)

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           W++A++L+ EM+ +       +  V++  LC  G +++  +L++        PNA  Y+ 
Sbjct: 240 WDDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNV 299

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+DG+C  G + R   L G ME+ G     V+Y  L++   +  ++E+  SL  EM  + 
Sbjct: 300 LIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERR 359

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P V  YN++   L +      AL + ++M       D  T++T I GLC+ G + EA 
Sbjct: 360 LPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAE 419

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            L R     +   ++ +Y  LI G C  G + +A  L   +  R    DVVT+  +IHGL
Sbjct: 420 RLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGL 479

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              GQ+ +A  +   M    + P+  I+  LI G  +         L+ +M E+ V PD 
Sbjct: 480 VVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDK 539

Query: 367 SIVSMVVD 374
            + + ++D
Sbjct: 540 YVYTTLID 547



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 105/236 (44%), Gaps = 27/236 (11%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN V Y+++I+G CK G  D A+ LF  M+ + + P+V+TY  LI  L   +    A 
Sbjct: 640 CQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAA 699

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             F  M+     P+  T + ++  LC     +  + ++       V  N      L+D  
Sbjct: 700 MYFEYMLLNQCSPNDYTLHSLVTGLC-----NSMASIISSHCSSTV--NLHGKGALLD-- 750

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
                      +F ++ +  C   + +YN +I   C +  + EAL L  +M +KG KP  
Sbjct: 751 -----------IFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDS 799

Query: 192 VTYNTLFLGLFEIHQV-EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            T+ +L  G   + +  E    L  E QRD++    S Y    D      Y+V++V
Sbjct: 800 ATFLSLLYGFCSVGKSREWRTILPNEFQRDELEV-ASRYKILFD-----QYVVKSV 849



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 91/206 (44%)

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
           E + A    R     G  P     N L   L E  + + A KL++EM  ++  AD  +  
Sbjct: 204 EAKAAEMCQRAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTC 263

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
             + GLC  G + + ++L        C  +   YN LIDG C+ G +   + L   +  +
Sbjct: 264 VMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAK 323

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
            L+  VVTY  ++  L   G ++K   L  +M E  + PNV I+ ++I    +    S+ 
Sbjct: 324 GLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQA 383

Query: 351 IELLHKMKEKKVMPDASIVSMVVDLL 376
           + +L +M      PDA   S ++  L
Sbjct: 384 LVVLKQMFAGGCDPDAITFSTLISGL 409


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 187/383 (48%), Gaps = 13/383 (3%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N  +   C PN  TYN ++DGLCK+G    A  +F +M    I P+V  Y  L+  LC+A
Sbjct: 196 NRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNA 255

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
              +EA +L   M D+G  P  VT+N  +  LCK G+++EA + L ++           Y
Sbjct: 256 GKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGY 315

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           S L+DG     + +     + +M       D V Y I+I G  +   +E+ALS    M  
Sbjct: 316 SCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKK 375

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
           KG  P    YNT+   L +   +E A  L  EM ++++  D++T    I GLCK G + E
Sbjct: 376 KGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDE 435

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL-----PRRVL------- 292
           A+++F  +G   C+  +  YN LIDG  + GRLE A  LF  +     P   L       
Sbjct: 436 AMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGAN 495

Query: 293 -VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
            V D  +   ++H +C  GQ+ KA+ L   + ++ V P+V+ + TLI+G  +       +
Sbjct: 496 QVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAV 555

Query: 352 ELLHKMKEKKVMPDASIVSMVVD 374
            L  +++ K + PD      ++D
Sbjct: 556 RLFKELQLKGISPDEITYGTLID 578



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 187/363 (51%), Gaps = 13/363 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYN  + GLCK G V++A    + ++       +  Y+ LI GL  A  ++E  
Sbjct: 273 CLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGF 332

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             +  M+++ + P VV + +++    + G++++A   LD+M ++   P+ F Y+T++   
Sbjct: 333 GYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVL 392

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + RA  L   M       D  +  I+I G CK   V+EA+ ++ EM   G  PTV
Sbjct: 393 CDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTV 452

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQ---------RDDVAA----DTSTYNTFIDGLCK 238
           +TYN L  G +   ++E A  LF +M+         R  + A    D+ +    +  +C+
Sbjct: 453 MTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQ 512

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           +G +++A +L R++       D+  YN LI+GLCK+  L+ A+ LF+ L  + +  D +T
Sbjct: 513 SGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEIT 572

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y  +I GL    + + A  LF ++ ++  +P++ I+ +++    R+ K S+ I L     
Sbjct: 573 YGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYL 632

Query: 359 EKK 361
            KK
Sbjct: 633 PKK 635



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 127/258 (49%)

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           G+  S   F  ++      G+  +A +    M +   RP AF Y+T++     +G I  A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
             L+  M + GC  +  +YN+L++G CK     +AL ++ EM+ +GI P V  Y  L   
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
           L    +++ A++L   M+      D  TYN F+ GLCK G + EA +    L      L 
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           ++ Y+CLIDGL ++ R +     ++++  R +  DVV Y IMI G    G+++ A     
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371

Query: 321 DMEENAVAPNVIIFVTLI 338
            M++    P+   + T++
Sbjct: 372 VMKKKGFVPDTFCYNTVL 389



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 165/357 (46%), Gaps = 51/357 (14%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T  YNT++  LC  G +++A  L  +M   N+  D  T   +I GLC     +EA ++
Sbjct: 380 PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQI 439

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL------ 127
           F EM + G  P+V+T+N ++D   + G+++EA R+L   ++    P+ F   TL      
Sbjct: 440 FDEMGEHGCDPTVMTYNALIDGFYREGRLEEA-RMLFHKMEMGNNPSLFLRLTLGANQVC 498

Query: 128 --------MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
                   +   C +G++ +A +L  S+   G   D V+YN LING CK + ++ A+ L+
Sbjct: 499 DSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLF 558

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
           +E+  KGI P  +TY TL  GL   H+   A+ LF+ + +   +   S YN+ +  LC+ 
Sbjct: 559 KELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRM 618

Query: 240 GYIVEAVELFRTLGILKCELDIQA------------------------------------ 263
             + +A+ L+      K    +++                                    
Sbjct: 619 KKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNP 678

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           Y   + GLC+  R + AL +F +L    +        ++I+ LC D  ++ A D+ L
Sbjct: 679 YTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIML 735



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 158/344 (45%), Gaps = 53/344 (15%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           ++ T   +I GLCK G VD+A  +F +M     +P V+TYN+LI G        EA R+ 
Sbjct: 416 DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEA-RML 474

Query: 75  FEMMDQGVQPSVV--------------TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           F  M+ G  PS+               +   ++ ++C++G++ +A +LL  ++   V P+
Sbjct: 475 FHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPD 534

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY+TL++G C    ++ A  LF  ++  G   D+++Y  LI+G  +     +A+ L++
Sbjct: 535 VVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQ 594

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF------------------------EE 216
            ++  G  P++  YN++   L  + ++  A+ L+                        E+
Sbjct: 595 NILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIED 654

Query: 217 MQRDDVAAD------------TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
              DD   +            ++ Y  ++ GLC+     +A+ +F TL     ++     
Sbjct: 655 GSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACC 714

Query: 265 NCLIDGLCKSGRLEIALE-LFRSLPRRVLVADVVTYNIMIHGLC 307
             LI+ LC    L  A++ +  +L + ++++  V  N ++  LC
Sbjct: 715 ALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVG-NRLLRWLC 757



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 114/257 (44%)

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           ++  ++ L+      G+   A + F  M+    +     YN ++     +  +  AL+LY
Sbjct: 136 SSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALY 195

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
             MV+ G  P   TYN L  GL +      ALK+F+EM    +  +   Y   +  LC  
Sbjct: 196 NRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNA 255

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G I EAV+L  ++    C  D   YN  + GLCK GR+  A +    L        +  Y
Sbjct: 256 GKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGY 315

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           + +I GL    + D+    +  M E  ++P+V+++  +I G     +    +  L  MK+
Sbjct: 316 SCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKK 375

Query: 360 KKVMPDASIVSMVVDLL 376
           K  +PD    + V+ +L
Sbjct: 376 KGFVPDTFCYNTVLKVL 392



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 38/246 (15%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GVV  P+ VTYNT+I+GLCK   +D A  LF +++ + I+PD +TY +LI GL  A+  N
Sbjct: 530 GVV--PDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREN 587

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCK------------------------------ 98
           +A  LF  ++  G  PS+  +N +M  LC+                              
Sbjct: 588 DAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLAN 647

Query: 99  ------NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
                 +G +D+  R L  + Q     ++  Y+  + G C   + + A  +F +++  G 
Sbjct: 648 AHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGI 707

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
                   +LIN  C ++ +  A+ +    +SK I  +    N L   L   ++ + A  
Sbjct: 708 DITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQA 767

Query: 213 LFEEMQ 218
           L   M 
Sbjct: 768 LAWRMH 773



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 70/161 (43%)

Query: 205 HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
           H  E       + +   + A +S +   +      G   +AV+ F  +   +       Y
Sbjct: 116 HADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVY 175

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
           N ++  L  SG + +AL L+  +       +  TYN+++ GLC  G    A  +F +M +
Sbjct: 176 NTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLD 235

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             + PNV I+  L+       K  + ++LL  MK+K  +PD
Sbjct: 236 RGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPD 276


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 178/350 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+ D   K      A  L  +M+ + +   +VT+N +I GLC   +   A   
Sbjct: 343 PDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGC 402

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M D G+ P V+T+N ++   CK G + +A  L+D MV+R ++ + FT +T++   C 
Sbjct: 403 LNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCK 462

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +   A+ L  S    G   D+VSY  ++  Y K    E AL L+ EM+ K + P++ T
Sbjct: 463 EKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSIST 522

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  GL  + +++ A+    E+    +  D +TYN  I   CK G +  A +    + 
Sbjct: 523 YNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMV 582

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+   N L++GLC +G+L+ AL+LF S   +    DV+TYN +I  +C DG +D
Sbjct: 583 ENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVD 642

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            A   F DME   + P+   +  ++       +  +   +LHK+ E   +
Sbjct: 643 TALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTL 692



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 185/365 (50%), Gaps = 1/365 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKG-ENINPDVVTYNSLIHGLCHANDWNEAK 71
           +P+  TYN +  GLC+ G VD+A  L  +M+    + PDVVTYN+L          ++A 
Sbjct: 306 EPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDAL 365

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL  EM ++GV+ ++VT N+++  LCK+G+++ A   L+ M    + P+  TY+TL+   
Sbjct: 366 RLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAH 425

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I +A  L   M   G K D  + N ++   CK K  EEA  L +    +G  P  
Sbjct: 426 CKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDE 485

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+Y T+    F+ +  E AL+L++EM    +    STYNT I GL + G + EA++    
Sbjct: 486 VSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNE 545

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L       D   YN +I   CK G LE A +    +       DVVT N +++GLC +G+
Sbjct: 546 LMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGK 605

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +DKA  LF    E     +VI + TLI    +       +     M+ + + PDA   ++
Sbjct: 606 LDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNV 665

Query: 372 VVDLL 376
           V+  L
Sbjct: 666 VLSAL 670



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 191/367 (52%), Gaps = 1/367 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           + +   PN  T+N ++   C +G +  A +    M+G  ++PD VTYN+L++  C     
Sbjct: 196 VALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGML 255

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA+ L   M   GV P+  T+N ++    + G + +A+++++ M      P+ +TY+ L
Sbjct: 256 GEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVL 315

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKG 186
             G C  GK++ A  L   ME +G    DV +YN L +   K +   +AL L  EM  KG
Sbjct: 316 AAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKG 375

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +K T+VT+N +  GL +  ++E AL    +M  D +A D  TYNT I   CK G I +A 
Sbjct: 376 VKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAY 435

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            L   +     +LD    N ++  LCK  R E A  L +S P+R  + D V+Y  ++   
Sbjct: 436 TLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAY 495

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             +   + A  L+ +M E  + P++  + TLI G  R+ +  + I+ L+++ EK ++PD 
Sbjct: 496 FKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDD 555

Query: 367 SIVSMVV 373
           +  ++++
Sbjct: 556 TTYNIII 562



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 186/389 (47%), Gaps = 38/389 (9%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G    P+ VTYNT+++  C++G + +A+AL  +MK + + P   TYN+L+          
Sbjct: 232 GFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIK 291

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ-RDVRPNAFTYSTL 127
           +A ++   M   G +P + T+NV+   LC+ GK+DEA RL D M +   + P+  TY+TL
Sbjct: 292 QATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTL 351

Query: 128 MDGFCLTGKINR-AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
            D  C   + +  A  L   M   G K   V++NI+I G CK+ E+E AL    +M   G
Sbjct: 352 ADA-CFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDG 410

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P V+TYNTL     +   +  A  L +EM R  +  DT T NT +  LCK     EA 
Sbjct: 411 LAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQ 470

Query: 247 ELFRT---LGILKCEL--------------------------------DIQAYNCLIDGL 271
            L ++    G +  E+                                 I  YN LI GL
Sbjct: 471 GLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGL 530

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
            + GRL+ A++    L  + LV D  TYNI+IH  C +G ++ A      M EN+  P+V
Sbjct: 531 SRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDV 590

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +   TL++G     K  K ++L     EK
Sbjct: 591 VTCNTLMNGLCLNGKLDKALKLFESWVEK 619



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 172/347 (49%), Gaps = 12/347 (3%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E GV  K   VT+N +I GLCK+G ++ A     +M  + + PDV+TYN+LIH  C A +
Sbjct: 373 EKGV--KATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGN 430

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A  L  EM+ +G++    T N ++  LCK  + +EA  LL    QR   P+  +Y T
Sbjct: 431 IAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGT 490

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           +M  +        A  L+  M          +YN LI G  +   ++EA+    E++ KG
Sbjct: 491 VMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKG 550

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P   TYN +     +   +E+A +   +M  +    D  T NT ++GLC NG + +A+
Sbjct: 551 LVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKAL 610

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +LF +      ++D+  YN LI  +CK G ++ AL  F  +  R L  D  TYN+++  L
Sbjct: 611 KLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSAL 670

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR-INKPSKVIE 352
              G+ ++A ++   + E+          TL   F   + KPS V E
Sbjct: 671 SEAGRTEEAQNMLHKLAESG---------TLSQSFSSPLLKPSSVDE 708



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 174/367 (47%), Gaps = 3/367 (0%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKAL--FLQMKGENINPDVVTYNSLIHGLCHANDW 67
           V  +P+    N ++  L +        +L  F  +    ++P+  T+N L+H  C     
Sbjct: 161 VRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTL 220

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            +A      M   G+ P  VT+N +++  C+ G + EA  LL  M +  V P   TY+TL
Sbjct: 221 ADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTL 280

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG- 186
           +  +   G I +A ++  +M + G + D  +YN+L  G C+  +V+EA  L  EM   G 
Sbjct: 281 VSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGT 340

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P VVTYNTL    F+      AL+L EEM+   V A   T+N  I GLCK+G +  A+
Sbjct: 341 LLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGAL 400

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
                +       D+  YN LI   CK+G +  A  L   + RR L  D  T N +++ L
Sbjct: 401 GCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNL 460

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C + + ++A  L     +    P+ + + T++  + +       + L  +M EKK+ P  
Sbjct: 461 CKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSI 520

Query: 367 SIVSMVV 373
           S  + ++
Sbjct: 521 STYNTLI 527



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 154/302 (50%), Gaps = 18/302 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+Y T++    KE   + A  L+ +M  + + P + TYN+LI GL       EA   
Sbjct: 483 PDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDK 542

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             E+M++G+ P   T+N+I+   CK G ++ A +  + MV+   +P+  T +TLM+G CL
Sbjct: 543 LNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCL 602

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+++A +LF S    G K D ++YN LI   CK+ +V+ AL  + +M ++G++P   T
Sbjct: 603 NGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFT 662

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +   L E  + E A  +  ++     A   +   +F   L K   + EA     +  
Sbjct: 663 YNVVLSALSEAGRTEEAQNMLHKL-----AESGTLSQSFSSPLLKPSSVDEA----ESGK 713

Query: 254 ILKCELDI---------QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
             K E +          +AY  L++GLC SG+ + A  +   + ++ +  D  TY  ++ 
Sbjct: 714 DAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLME 773

Query: 305 GL 306
           GL
Sbjct: 774 GL 775



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 130/262 (49%), Gaps = 4/262 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYNT+I GL + G + +A     ++  + + PD  TYN +IH  C   D   A + 
Sbjct: 518 PSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQF 577

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M++   +P VVT N +M+ LC NGK+D+A +L +  V++  + +  TY+TL+   C 
Sbjct: 578 HNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCK 637

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A   F  ME+ G + D  +YN++++   +    EEA ++  ++   G      +
Sbjct: 638 DGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGT--LSQS 695

Query: 194 YNTLFLGLFEIHQVEHA--LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +++  L    + + E     K  EE   +   + +  Y   ++GLC +G   EA  +   
Sbjct: 696 FSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDE 755

Query: 252 LGILKCELDIQAYNCLIDGLCK 273
           +      +D   Y  L++GL K
Sbjct: 756 MMQKGMSVDSSTYITLMEGLVK 777



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 109/207 (52%), Gaps = 15/207 (7%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVTYNSLIHGLCHANDWNEA 70
           KP+ VT NT+++GLC  G +DKA  LF     KG+ +  DV+TYN+LI  +C   D + A
Sbjct: 587 KPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKV--DVITYNTLIQTMCKDGDVDTA 644

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
              F +M  +G+QP   T+NV++  L + G+ +EA  +L  + +      +F+   L   
Sbjct: 645 LHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPS 704

Query: 131 F---CLTGKINRAEELFGSMESMGCKHDDVS--YNILINGYCKNKEVEEALSLYREMVSK 185
                 +GK  + EE     E++    D  S  Y  L+NG C + + +EA ++  EM+ K
Sbjct: 705 SVDEAESGKDAKTEE-----ETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQK 759

Query: 186 GIKPTVVTYNTLFLGLFEIHQ-VEHAL 211
           G+     TY TL  GL +  + + HA+
Sbjct: 760 GMSVDSSTYITLMEGLVKRQKRLTHAV 786


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 189/374 (50%), Gaps = 13/374 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY  +I GLCK      A  LF +M    I P+ + Y+ ++ GLC A    +A+RL
Sbjct: 196 PDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRL 255

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M   G    ++T+NV+++  CK+G +D+A  LL L+ +         Y  L++G   
Sbjct: 256 FSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFR 315

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +   A   +  M     K D + Y I+I G  +   V EAL+L  EM  +G++P  + 
Sbjct: 316 ARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTIC 375

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  ++  ++ A  L  E+ + D   +  TY+  I G+CKNG I +A  +F+ + 
Sbjct: 376 YNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEME 435

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL-----PRRVL--------VADVVTYN 300
            L C   +  +N LI+GLCK+ RLE A  LF  +     P   L        V D+ +  
Sbjct: 436 KLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQ 495

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +M+  LC  G + KA+ L + + ++ V P++  +  LI+GF +    +   +L  +M+ K
Sbjct: 496 VMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLK 555

Query: 361 KVMPDASIVSMVVD 374
             MPD+     ++D
Sbjct: 556 GHMPDSVTYGTLID 569



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 180/346 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K ++  ++ +I+   + G  +KA   F  M+  +  PD+  +N ++H L     +  A  
Sbjct: 125 KISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALA 184

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++ +M+   + P VVT+ +++  LCK  K  +A  L D M  R + PN   YS ++ G C
Sbjct: 185 VYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLC 244

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              KI  A+ LF  M + GC  D ++YN+L+NG+CK+  +++A +L + +   G    V+
Sbjct: 245 QAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVI 304

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y  L  GLF   + E A   +++M R+++  D   Y   I GL + G + EA+ L   +
Sbjct: 305 GYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEM 364

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D   YN LI G C  G L+ A  L   + +     +  TY+I+I G+C +G +
Sbjct: 365 TERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLI 424

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           +KA  +F +ME+    P+V+ F +LI+G  + N+  +   L ++M+
Sbjct: 425 NKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQME 470



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 159/322 (49%), Gaps = 14/322 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TY+ +I G+CK G ++KA+ +F +M+     P VVT+NSLI+GLC AN   EA+
Sbjct: 404 CFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEAR 463

Query: 72  RLFFEM-----------MDQGVQP--SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR 118
            LF++M           + QG      + +  V+M+ LC++G + +A +LL  +V   V 
Sbjct: 464 LLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVL 523

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           P+  TY+ L++GFC  G IN A +LF  M+  G   D V+Y  LI+G  +    E+AL +
Sbjct: 524 PDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEI 583

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
           + +MV KG  P   TY T+       + +  AL ++ +  RD    +        +    
Sbjct: 584 FEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESF-D 642

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           N  +  A+     + I     D+  Y   + GL ++ R   A  +F  L    +     +
Sbjct: 643 NEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSAS 702

Query: 299 YNIMIHGLCNDGQMDKAHDLFL 320
             ++I  LC    +D A D+FL
Sbjct: 703 CVMLIGRLCMVENLDMAMDVFL 724



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 143/277 (51%)

Query: 90  NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
           ++I+ +L K    +   ++L  +    ++ ++  +S L++ +   G   +A E FG M  
Sbjct: 97  DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRD 156

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
             CK D  ++N++++   + +    AL++Y +M+   + P VVTY  L  GL +  + + 
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQD 216

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           AL LF+EM    +  +   Y+  + GLC+   I +A  LF  +    C  D+  YN L++
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           G CKSG L+ A  L + L +   +  V+ Y  +I+GL    + ++AH  +  M    + P
Sbjct: 277 GFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKP 336

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +V+++  +I G  +  + ++ + LL +M E+ + PD 
Sbjct: 337 DVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDT 373



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 157/341 (46%), Gaps = 3/341 (0%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           + II  L KE   +    +  ++K   I      ++ LI     A    +A   F  M D
Sbjct: 97  DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRD 156

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
              +P +  FN+I+  L +      A  + + M++ ++ P+  TY  L+ G C T K   
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQD 216

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A  LF  M   G   + + Y+I+++G C+ K++ +A  L+ +M + G    ++TYN L  
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           G  +   ++ A  L + + +D        Y   I+GL +     EA   ++ +     + 
Sbjct: 277 GFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKP 336

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           D+  Y  +I GL + GR+  AL L   +  R L  D + YN +I G C+ G +D+A  L 
Sbjct: 337 DVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLR 396

Query: 320 LDMEENAVAPNVIIFVTLIHGFVR---INKPSKVIELLHKM 357
           L++ ++   PN   +  LI G  +   INK   + + + K+
Sbjct: 397 LEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKL 437



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/113 (23%), Positives = 57/113 (50%)

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
           +A++ LI+   ++G  E A+E F  +       D+  +N+++H L        A  ++  
Sbjct: 129 EAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQ 188

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           M +  + P+V+ +  LIHG  +  K    + L  +M ++ ++P+  I S+V+ 
Sbjct: 189 MLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLS 241


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/386 (31%), Positives = 191/386 (49%), Gaps = 19/386 (4%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N  +   C PN  TYN ++DGLCK+G    A  +F +M    I P+V  Y  L+  LC+A
Sbjct: 196 NRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNA 255

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
              +EA +L   M D+G  P  VT+N  +  LCK G+++EA + L ++           Y
Sbjct: 256 GKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGY 315

Query: 125 STLMDGFCLTGKINRAEELFGSMESM---GCKHDDVSYNILINGYCKNKEVEEALSLYRE 181
           S L+DG     +  R +E FG  ++M       D V Y I+I G  +   +E+ALS    
Sbjct: 316 SCLIDGLF---QARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDV 372

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M  KG  P    YNT+   L +   +E A  L  EM ++++  D++T    I GLCK G 
Sbjct: 373 MKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGL 432

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL-----PRRVL---- 292
           + EA+++F  +G   C+  +  YN LIDG  + GRLE A  LF  +     P   L    
Sbjct: 433 VDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTL 492

Query: 293 ----VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
               V D  +   ++H +C  GQ+ KA+ L   + ++ V P+V+ + TLI+G  +     
Sbjct: 493 GANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLD 552

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVD 374
             + L  +++ K + PD      ++D
Sbjct: 553 GAVRLFKELQLKGISPDEITYGTLID 578



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 187/363 (51%), Gaps = 13/363 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYN  + GLCK G V++A    + ++       +  Y+ LI GL  A  ++E  
Sbjct: 273 CLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGF 332

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             +  M+++ + P VV + +++    + G++++A   LD+M ++   P+ F Y+T++   
Sbjct: 333 GYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVL 392

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G + RA  L   M       D  +  I+I G CK   V+EA+ ++ EM   G  PTV
Sbjct: 393 CDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTV 452

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQ---------RDDVAA----DTSTYNTFIDGLCK 238
           +TYN L  G +   ++E A  LF +M+         R  + A    D+ +    +  +C+
Sbjct: 453 MTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQ 512

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           +G +++A +L R++       D+  YN LI+GLCK+  L+ A+ LF+ L  + +  D +T
Sbjct: 513 SGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEIT 572

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y  +I GL    + + A  LF ++ ++  +P++ I+ +++    R+ K S+ I L     
Sbjct: 573 YGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYL 632

Query: 359 EKK 361
            KK
Sbjct: 633 PKK 635



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 127/258 (49%)

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           G+  S   F  ++      G+  +A +    M +   RP AF Y+T++     +G I  A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
             L+  M + GC  +  +YN+L++G CK     +AL ++ EM+ +GI P V  Y  L   
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
           L    +++ A++L   M+      D  TYN F+ GLCK G + EA +    L      L 
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           ++ Y+CLIDGL ++ R +     ++++  R +  DVV Y IMI G    G+++ A     
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371

Query: 321 DMEENAVAPNVIIFVTLI 338
            M++    P+   + T++
Sbjct: 372 VMKKKGFVPDTFCYNTVL 389



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 165/357 (46%), Gaps = 51/357 (14%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T  YNT++  LC  G +++A  L  +M   N+  D  T   +I GLC     +EA ++
Sbjct: 380 PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQI 439

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL------ 127
           F EM + G  P+V+T+N ++D   + G+++EA R+L   ++    P+ F   TL      
Sbjct: 440 FDEMGEHGCDPTVMTYNALIDGFYREGRLEEA-RMLFHKMEMGNNPSLFLRLTLGANQVR 498

Query: 128 --------MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
                   +   C +G++ +A +L  S+   G   D V+YN LING CK + ++ A+ L+
Sbjct: 499 DSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLF 558

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
           +E+  KGI P  +TY TL  GL   H+   A+ LF+ + +   +   S YN+ +  LC+ 
Sbjct: 559 KELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRM 618

Query: 240 GYIVEAVELFRTLGILKCELDIQA------------------------------------ 263
             + +A+ L+      K    +++                                    
Sbjct: 619 KKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNP 678

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           Y   + GLC+  R + AL +F +L    +        ++I+ LC D  ++ A D+ L
Sbjct: 679 YTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIML 735



 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 158/344 (45%), Gaps = 53/344 (15%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           ++ T   +I GLCK G VD+A  +F +M     +P V+TYN+LI G        EA R+ 
Sbjct: 416 DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEA-RML 474

Query: 75  FEMMDQGVQPSVV--------------TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           F  M+ G  PS+               +   ++ ++C++G++ +A +LL  ++   V P+
Sbjct: 475 FHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPD 534

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
             TY+TL++G C    ++ A  LF  ++  G   D+++Y  LI+G  +     +A+ L++
Sbjct: 535 VVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQ 594

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF------------------------EE 216
            ++  G  P++  YN++   L  + ++  A+ L+                        E+
Sbjct: 595 NILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIED 654

Query: 217 MQRDDVAAD------------TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
              DD   +            ++ Y  ++ GLC+     +A+ +F TL     ++     
Sbjct: 655 GSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACC 714

Query: 265 NCLIDGLCKSGRLEIALE-LFRSLPRRVLVADVVTYNIMIHGLC 307
             LI+ LC    L  A++ +  +L + ++++  V  N ++  LC
Sbjct: 715 ALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVG-NRLLRWLC 757



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 114/257 (44%)

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           ++  ++ L+      G+   A + F  M+    +     YN ++     +  +  AL+LY
Sbjct: 136 SSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALY 195

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
             MV+ G  P   TYN L  GL +      ALK+F+EM    +  +   Y   +  LC  
Sbjct: 196 NRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNA 255

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G I EAV+L  ++    C  D   YN  + GLCK GR+  A +    L        +  Y
Sbjct: 256 GKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGY 315

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           + +I GL    + D+    +  M E  ++P+V+++  +I G     +    +  L  MK+
Sbjct: 316 SCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKK 375

Query: 360 KKVMPDASIVSMVVDLL 376
           K  +PD    + V+ +L
Sbjct: 376 KGFVPDTFCYNTVLKVL 392



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 38/246 (15%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GVV  P+ VTYNT+I+GLCK   +D A  LF +++ + I+PD +TY +LI GL  A+  N
Sbjct: 530 GVV--PDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREN 587

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCK------------------------------ 98
           +A  LF  ++  G  PS+  +N +M  LC+                              
Sbjct: 588 DAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLAN 647

Query: 99  ------NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
                 +G +D+  R L  + Q     ++  Y+  + G C   + + A  +F +++  G 
Sbjct: 648 AHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGI 707

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
                   +LIN  C ++ +  A+ +    +SK I  +    N L   L   ++ + A  
Sbjct: 708 DITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQA 767

Query: 213 LFEEMQ 218
           L   M 
Sbjct: 768 LAWRMH 773



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 70/161 (43%)

Query: 205 HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
           H  E       + +   + A +S +   +      G   +AV+ F  +   +       Y
Sbjct: 116 HADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVY 175

Query: 265 NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE 324
           N ++  L  SG + +AL L+  +       +  TYN+++ GLC  G    A  +F +M +
Sbjct: 176 NTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLD 235

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             + PNV I+  L+       K  + ++LL  MK+K  +PD
Sbjct: 236 RGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPD 276


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 173/317 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V Y  +I G C+ G +  A  +  +M G    PDVVTYN+L++GLC      +A+ L
Sbjct: 14  PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 73

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM ++GV P + TF  ++   C  GK+D+A +L D M+ + +RP+  TY+TL+DG C 
Sbjct: 74  LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 133

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +++A +L+  M S     + V+Y+ILI+ +C+  +VE+A     EM++KGI P ++T
Sbjct: 134 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 193

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN++  G      V    K  ++M  + V+ D  TYNT I G  K   + +A +L   + 
Sbjct: 194 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME 253

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K + D+  YN LI+G    G ++ A  +F  +  + +  D  TY  MI+G    G   
Sbjct: 254 KEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSK 313

Query: 314 KAHDLFLDMEENAVAPN 330
           +A  L  +M +   AP+
Sbjct: 314 EAFQLHDEMLQRGFAPD 330



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 181/329 (55%)

Query: 37  ALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
           A   +M+   + PD V Y  +I G C A   ++A R+  EM+  G  P VVT+N +++ L
Sbjct: 2   AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 61

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           CK  ++ +A  LL+ M +R V P+  T++TL+ G+C+ GK+++A +LF +M +   + D 
Sbjct: 62  CKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDI 121

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           V+YN LI+G C+  ++++A  L+ +M S+ I P  VTY+ L     E  QVE A    +E
Sbjct: 122 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 181

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M    +  +  TYN+ I G C++G + +  +  + + + K   D+  YN LI G  K  +
Sbjct: 182 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 241

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           +  A +L   + +  +  DVVTYN++I+G    G + +A  +F  M    + P+   +++
Sbjct: 242 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 301

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +I+G V      +  +L  +M ++   PD
Sbjct: 302 MINGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 160/288 (55%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G  C P+ VTYNT+++GLCKE  +  A+ L  +M+   + PD+ T+ +LIHG C     
Sbjct: 43  VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKL 102

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           ++A +LF  M++Q ++P +VT+N ++D +C+ G +D+A+ L D M  R++ PN  TYS L
Sbjct: 103 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 162

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D  C  G++  A      M + G   + ++YN +I GYC++  V +     ++M+   +
Sbjct: 163 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 222

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P ++TYNTL  G  +  ++  A KL   M+++ V  D  TYN  I+G   +G + EA  
Sbjct: 223 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 282

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           +F  +     E D   Y  +I+G   +G  + A +L   + +R    D
Sbjct: 283 IFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 142/256 (55%)

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           P+   Y+ ++ GFC  G ++ A  +   M   GC  D V+YN L+NG CK + + +A  L
Sbjct: 14  PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 73

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
             EM  +G+ P + T+ TL  G     +++ AL+LF+ M    +  D  TYNT IDG+C+
Sbjct: 74  LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 133

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
            G + +A +L+  +   +   +   Y+ LID  C+ G++E A      +  + ++ +++T
Sbjct: 134 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 193

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           YN +I G C  G + K       M  N V+P++I + TLIHG+++ +K     +LL+ M+
Sbjct: 194 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME 253

Query: 359 EKKVMPDASIVSMVVD 374
           ++KV PD    +M+++
Sbjct: 254 KEKVQPDVVTYNMLIN 269



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 98/198 (49%)

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
           ++  REM   G+ P  V Y  +  G      +  AL++ +EM       D  TYNT ++G
Sbjct: 1   MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           LCK   +++A  L   +       D+  +  LI G C  G+L+ AL+LF ++  + L  D
Sbjct: 61  LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 120

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           +VTYN +I G+C  G +DKA+DL+ DM    + PN + +  LI       +       L 
Sbjct: 121 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 180

Query: 356 KMKEKKVMPDASIVSMVV 373
           +M  K ++P+    + ++
Sbjct: 181 EMINKGILPNIMTYNSII 198



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 80/143 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +TYN+II G C+ G V K +    +M    ++PD++TYN+LIHG    +  ++A +L
Sbjct: 189 PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKL 248

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  + VQP VVT+N++++    +G + EA  + + M  + + P+ +TY ++++G   
Sbjct: 249 LNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVT 308

Query: 134 TGKINRAEELFGSMESMGCKHDD 156
            G    A +L   M   G   DD
Sbjct: 309 AGNSKEAFQLHDEMLQRGFAPDD 331



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 81/164 (49%)

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           +    EM+   +  D   Y   I G C+ G + +A+ +   +    C  D+  YN L++G
Sbjct: 1   MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           LCK  RL  A  L   +  R +  D+ T+  +IHG C +G++DKA  LF  M    + P+
Sbjct: 61  LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 120

Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           ++ + TLI G  R     K  +L   M  +++ P+    S+++D
Sbjct: 121 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILID 164


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 196/400 (49%), Gaps = 35/400 (8%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C PN V YNT+IDG CK+G V+ A  LF ++K +   P + T+ SL++G C    + 
Sbjct: 236 GKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFE 295

Query: 69  EAKRLFFEMMDQGV-----------------------------------QPSVVTFNVIM 93
               L  EM D+G+                                   +P +VT+N ++
Sbjct: 296 AIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLI 355

Query: 94  DELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCK 153
           +  C  G+++EA +LL+  ++R + PN  TY+ L+ G+C  G+  +A +    M + G +
Sbjct: 356 NHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLE 415

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            D +SY  LI+G     EV+ AL++   M+++GI P    YN L  GLF+  ++  A  +
Sbjct: 416 VDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVM 475

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
             EM   ++A D   Y T +DG  ++G + EA +LF+ +     +  +  YN +I G  K
Sbjct: 476 LTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSK 535

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           SG ++ A+     + R   V D+ T++ +I G      M+    +F  M +    PNV+ 
Sbjct: 536 SGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVT 595

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           + +LI+G+ R  +     +L   M+   + P     S+++
Sbjct: 596 YTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILI 635



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 175/331 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ VTYNT+I+  C  G V++A+ L  Q     + P+ +TY  L+HG C   ++ +A 
Sbjct: 344 CEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKAT 403

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
               EM   G++  ++++  ++  L   G++D A  + D M+ R + P+A  Y+ LM+G 
Sbjct: 404 DYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGL 463

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              GK++ A+ +   M       D   Y  L++G+ ++  ++EA  L++ ++ KG+ P V
Sbjct: 464 FKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGV 523

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YN +  G  +   +++A+   ++M+R     D  T++T IDG  K   +   +++F  
Sbjct: 524 VGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGL 583

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ ++  Y  LI+G C+ G  ++A +LF  +    L   VVTY+I+I   C + +
Sbjct: 584 MVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAK 643

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           + KA   F  M  N   PN   F  L++GF 
Sbjct: 644 LGKAVSYFELMLINKCTPNDAAFHYLVNGFT 674



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 157/297 (52%), Gaps = 4/297 (1%)

Query: 84  PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD----VRPNAFTYSTLMDGFCLTGKINR 139
           PS    N +++ L K+ +++ A +L D M+ RD    +  + +T S ++ G CL G+I  
Sbjct: 167 PSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIED 226

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
             +L  S    GC  + V YN LI+GYCK  EVE A  L++++  KG  PT+ T+ +L  
Sbjct: 227 GIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVN 286

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           G  ++   E    L  EM+   ++ +   YN  ID   K G+ ++A +  + +    CE 
Sbjct: 287 GFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEP 346

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           D+  YN LI+  C  G +E A +L     RR L  + +TY  ++HG C  G+  KA D  
Sbjct: 347 DLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYL 406

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           ++M  + +  ++I +  LIHG V   +    + +  +M  + ++PDA+I +++++ L
Sbjct: 407 IEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGL 463



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 153/295 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +TY  ++ G CK+G   KA    ++M    +  D+++Y +LIHGL  A + + A  +
Sbjct: 381 PNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTI 440

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              MM++G+ P    +NV+M+ L K GK+  A  +L  M+ +++ P+AF Y+TL+DGF  
Sbjct: 441 RDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIR 500

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A++LF  +   G     V YN++I G+ K+  ++ A+    +M      P + T
Sbjct: 501 HGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFT 560

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           ++T+  G  + H +   LK+F  M + +   +  TY + I+G C+ G    A +LF  + 
Sbjct: 561 FSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMR 620

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
               +  +  Y+ LI   CK  +L  A+  F  +       +   ++ +++G  N
Sbjct: 621 SHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTN 675



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 173/355 (48%), Gaps = 4/355 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQM----KGENINPDVVTYNSLIHGLCHANDWNE 69
           P+T   N++++ L K   ++ A  L+ +M     G++I  D  T + ++ GLC      +
Sbjct: 167 PSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIED 226

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
             +L      +G  P++V +N ++D  CK G+++ A +L   +  +   P   T+ +L++
Sbjct: 227 GIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVN 286

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GFC  G     + L   M+  G   +   YN +I+   K     +A    +EM     +P
Sbjct: 287 GFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEP 346

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            +VTYNTL        +VE A KL E+  R  +A +  TY   + G CK G   +A +  
Sbjct: 347 DLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYL 406

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +     E+D+ +Y  LI GL  +G ++ AL +   +  R ++ D   YN++++GL   
Sbjct: 407 IEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKK 466

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           G++  A  +  +M +  +AP+  ++ TL+ GF+R     +  +L   + EK + P
Sbjct: 467 GKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDP 521



 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 148/331 (44%), Gaps = 49/331 (14%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  V YN +I G  K G +D A     +M+  +  PD+ T++++I G    ++ N   ++
Sbjct: 521 PGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKI 580

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+ Q  +P+VVT+  +++  C+ G+   A +L  +M    ++P+  TYS L+  FC 
Sbjct: 581 FGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCK 640

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV----------EEALSLYRE-- 181
             K+ +A   F  M    C  +D +++ L+NG+   K            E + S++ +  
Sbjct: 641 EAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFF 700

Query: 182 --MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
             M+  G       YN + + L +   V+ AL+L  +M    + +D  ++   I G+C  
Sbjct: 701 SRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLE 760

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G   E    +R +  + C+L+              G L+IAL+                Y
Sbjct: 761 GNSKE----WRNM--ISCDLN-------------EGELQIALK----------------Y 785

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
           ++ +     +G + +A  +   M +  V+PN
Sbjct: 786 SLELDKFIPEGGISEASGILQAMIKGYVSPN 816


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 175/310 (56%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  CKP+ VTYN +I G CKEG +D+A     ++       DV+++N ++  LC    W 
Sbjct: 234 GKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWM 293

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A +L   M+ +G  PSVVTFN++++ LC+ G + +A  +L++M +    PN+ +++ L+
Sbjct: 294 DAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLI 353

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            GFC    I+RA E    M S GC  D V+YNIL+   CK+ +V++A+ +  ++ SKG  
Sbjct: 354 QGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCS 413

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P++++YNT+  GL ++ + E A++L EEM    +  D  T  + + GL + G + EA++ 
Sbjct: 414 PSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKF 473

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  L     + +   YN ++ GLCK+ +  +A++    +          +Y  +I G+  
Sbjct: 474 FHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITY 533

Query: 309 DGQMDKAHDL 318
           +G  ++A  L
Sbjct: 534 EGLAEEASKL 543



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 180/360 (50%), Gaps = 3/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V    +I   CK G    A  +   ++      D  +YN LI+  C + +  EA R+
Sbjct: 102 PDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALRV 161

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              +    V P+  T++ ++  LC  GK+ +A ++LD  +Q    P+  T + L+D  C 
Sbjct: 162 ---LDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCK 218

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              + +A +LF  M   GCK D V+YN+LI G+CK   ++EA+   +++ S G +  V++
Sbjct: 219 ESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVIS 278

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N +   L    +   A+KL   M R        T+N  I+ LC+ G + +A+ +   + 
Sbjct: 279 HNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMP 338

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 + +++N LI G C    ++ A+E    +  R    D+VTYNI++  LC DG++D
Sbjct: 339 KHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVD 398

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  +   +     +P++I + T+I G +++ K    +ELL +M  K + PD    + VV
Sbjct: 399 DAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVV 458



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 179/360 (49%), Gaps = 1/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY+ ++  LC  G + +A  +  +       PDVVT   LI   C  +   +A +L
Sbjct: 169 PNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKL 228

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM  +G +P VVT+NV++   CK G++DEA   L  +     + +  +++ ++   C 
Sbjct: 229 FNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCS 288

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A +L  +M   GC    V++NILIN  C+   + +AL++   M   G  P   +
Sbjct: 289 GGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRS 348

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L  G      ++ A++  E M       D  TYN  +  LCK+G + +AV +   L 
Sbjct: 349 FNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLS 408

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C   + +YN +IDGL K G+ E+A+EL   +  + L  D++T   ++ GL  +G++ 
Sbjct: 409 SKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVH 468

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP-DASIVSMV 372
           +A   F  ++   + PN  I+ +++ G  +  + S  I+ L  M      P +AS  +++
Sbjct: 469 EAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLI 528



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 183/367 (49%), Gaps = 5/367 (1%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E G V   N+  YN +I+  CK G +++A  +   +   ++ P+  TY++++  LC    
Sbjct: 132 ESGAVIDANS--YNVLINAYCKSGEIEEALRV---LDHTSVAPNAATYDAVLCSLCDRGK 186

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A ++    +     P VVT  V++D  CK   + +A +L + M  +  +P+  TY+ 
Sbjct: 187 LKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNV 246

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ GFC  G+++ A      + S GC+ D +S+N+++   C      +A+ L   M+ KG
Sbjct: 247 LIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKG 306

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
             P+VVT+N L   L +   +  AL + E M +     ++ ++N  I G C    I  A+
Sbjct: 307 CFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAI 366

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           E    +    C  DI  YN L+  LCK G+++ A+ +   L  +     +++YN +I GL
Sbjct: 367 EHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGL 426

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              G+ + A +L  +M    + P++I   +++ G  R  K  + I+  H +K   + P+A
Sbjct: 427 LKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNA 486

Query: 367 SIVSMVV 373
            I + ++
Sbjct: 487 FIYNSIM 493



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 139/304 (45%), Gaps = 34/304 (11%)

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            L +NG+++E SR L+ M  +   P+    + L+  FC  G+   A  + G +E  G   
Sbjct: 78  RLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVI 137

Query: 155 DDVSYNILINGYCKNKEVEEALS---------------------------------LYRE 181
           D  SYN+LIN YCK+ E+EEAL                                  L R+
Sbjct: 138 DANSYNVLINAYCKSGEIEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQ 197

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           + SK   P VVT   L     +   V  A+KLF EM+      D  TYN  I G CK G 
Sbjct: 198 LQSK-CYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGR 256

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           + EA+   + L    C+ D+ ++N ++  LC  GR   A++L  ++ R+     VVT+NI
Sbjct: 257 LDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNI 316

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           +I+ LC  G + KA ++   M ++   PN   F  LI GF       + IE L  M  + 
Sbjct: 317 LINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRG 376

Query: 362 VMPD 365
             PD
Sbjct: 377 CYPD 380



 Score = 43.1 bits (100), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 36/82 (43%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN   YN+I+ GLCK      A    + M      P   +Y +LI G+ +     EA +
Sbjct: 483 KPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASK 542

Query: 73  LFFEMMDQGVQPSVVTFNVIMD 94
           L  E+  +G+    +   V  D
Sbjct: 543 LSNELYSRGLVKKSLIVKVSQD 564


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/354 (33%), Positives = 190/354 (53%), Gaps = 4/354 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN +I+G+C  G + +   L   MK   + PDVVTYN+LI G        EAK+L
Sbjct: 308 PDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKL 367

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ-RDVRPNAFTYSTLMDGFC 132
             +M + GV+P+ VT N+ +  LCK  K +E +R +  +V+     P+  TY TL+  + 
Sbjct: 368 MEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYL 427

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A E+   M   G K + ++ N +++  CK ++V+EA +L      +G     V
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEV 487

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL +G F   +VE A ++++EM+R  +    +T+N+ I GLC +G    A+E F  L
Sbjct: 488 TYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDEL 547

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D   +N +I G CK GR+E A E +    +     D  T NI+++GLC +G  
Sbjct: 548 AESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607

Query: 313 DKAHDLFLDM-EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +KA + F  +  E  V  + + + T+I  F +  K  +  +LL +M+EK++ PD
Sbjct: 608 EKALNFFNTLITEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPD 659



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/351 (33%), Positives = 184/351 (52%), Gaps = 6/351 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTYNT+IDG  + G   +AK L  QM+ + + P+ VT+N  +  LC      E  R
Sbjct: 342 QPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTR 401

Query: 73  LFFEMMD-QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
              E+++  G  P +VT++ ++    K G +  A  ++  M Q+ ++ N  T +T++D  
Sbjct: 402 KVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++ A  L  S    G   D+V+Y  LI GY + ++VE+A  ++ EM    I PTV
Sbjct: 462 CKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTV 521

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+N+L  GL    + E A++ F+E+    +  D  T+N+ I G CK G + +A E +  
Sbjct: 522 TTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNE 581

Query: 252 LGILKCELDIQAYNC--LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
              +K       Y C  L++GLCK G  E AL  F +L     V D VTYN MI   C D
Sbjct: 582 --SIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREV-DTVTYNTMISAFCKD 638

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            ++ +A+DL  +MEE  + P+   + ++I   +   K S+  ELL K   K
Sbjct: 639 KKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGK 689



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 186/353 (52%), Gaps = 1/353 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNTI+  + K+G +   K L L MK   + P+ VTYN+L++G C      EA ++
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M    + P + T+N++++ +C  G + E   L+D+M    ++P+  TY+TL+DG   
Sbjct: 298 VELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFE 357

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIKPTVV 192
            G    A++L   ME+ G K + V++NI +   CK ++ EE     +E+V   G  P +V
Sbjct: 358 LGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIV 417

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+TL     ++  +  AL++  EM +  +  +T T NT +D LCK   + EA  L  + 
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSA 477

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 +D   Y  LI G  +  ++E A E++  + R  +   V T+N +I GLC+ G+ 
Sbjct: 478 HKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKT 537

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + A + F ++ E+ + P+   F ++I G+ +  +  K  E  ++  +    PD
Sbjct: 538 ELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 185/371 (49%), Gaps = 5/371 (1%)

Query: 8   IGVVCKPNTVTYNTIIDGLCK--EGF-VDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           I +  KPN +T NT++ GL +    F +  A+ +F  M    ++ DV T+N L++G C  
Sbjct: 158 IRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLE 217

Query: 65  NDWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
               +A  +   M+ +  V P  VT+N I+  + K G++ +   LL  M +  + PN  T
Sbjct: 218 GKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVT 277

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           Y+ L+ G+C  G +  A ++   M+      D  +YNILING C    + E L L   M 
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMK 337

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
           S  ++P VVTYNTL  G FE+     A KL E+M+ D V  +  T+N  +  LCK     
Sbjct: 338 SLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKRE 397

Query: 244 EAVELFRTL-GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
           E     + L  +     DI  Y+ LI    K G L  ALE+ R + ++ +  + +T N +
Sbjct: 398 EVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTI 457

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           +  LC + ++D+AH+L     +     + + + TLI G+ R  K  K  E+  +MK  K+
Sbjct: 458 LDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKI 517

Query: 363 MPDASIVSMVV 373
            P  +  + ++
Sbjct: 518 TPTVTTFNSLI 528



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 157/336 (46%), Gaps = 46/336 (13%)

Query: 84  PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG---FCLTGKINRA 140
           PS   F++ +      GK   A ++   M++  ++PN  T +TL+ G   +  +  I  A
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFL 199
            E+F  M  +G   D  ++N+L+NGYC   ++E+AL +   MVS+  + P  VTYNT+  
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILK 248

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA---VELFRTLGILK 256
            + +  ++     L  +M+R+ +  +  TYN  + G CK G + EA   VEL +   IL 
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILP 308

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              D+  YN LI+G+C +G +   LEL   +    L  DVVTYN +I G    G   +A 
Sbjct: 309 ---DLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAK 365

Query: 317 DLFLDMEENAVAPN------------------------------------VIIFVTLIHG 340
            L   ME + V PN                                    ++ + TLI  
Sbjct: 366 KLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKA 425

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           ++++   S  +E++ +M +K +  +   ++ ++D L
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 139/269 (51%), Gaps = 27/269 (10%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTY T+I G  +E  V+KA  ++ +MK   I P V T+NSLI GLCH      A   F E
Sbjct: 487 VTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDE 546

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           + + G+ P   TFN I+   CK G++++A    +  ++   +P+ +T + L++G C  G 
Sbjct: 547 LAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
             +A   F ++ +   + D V+YN +I+ +CK+K+++EA  L  EM  K ++P   TYN+
Sbjct: 607 TEKALNFFNTLITER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNS 665

Query: 197 LFLGLFEIHQVEHALKL-------FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           +   L E  ++  A +L       F  M+R ++  +T           KN    E+ E  
Sbjct: 666 IITSLMEDGKLSEADELLKKFSGKFGSMKR-NLHLETE----------KNPATSESKEEL 714

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLE 278
           +T  I        AY+ +I+ LC  GRL+
Sbjct: 715 KTEAI--------AYSDVINELCSRGRLK 735


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 201/401 (50%), Gaps = 41/401 (10%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + VTY T+IDGLCK G +D A+AL  +M      P+VVTY +LI GLC A   ++A +  
Sbjct: 9   SVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTV 68

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M+  G +P +VT+N ++  LC   +MD+A  +L  +V+    PN  TYSTL+   C  
Sbjct: 69  KRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRR 128

Query: 135 GKINRAEELFGSMESMG--------------------------CKHDD-----------V 157
            ++++A  L   M   G                          C+  D           V
Sbjct: 129 RRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVV 188

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +YN  I+G CK  ++++ L +  EM   GI P VVT+ ++  GL + ++++ A ++F+ M
Sbjct: 189 TYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGM 248

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK--CELDIQAYNCLIDGLCKSG 275
                  D+ TY+  +D L +   +    E+   +  +K  C +++  +N  I  LC+SG
Sbjct: 249 LERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSG 308

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM-EENAVAPNVIIF 334
           +  +A  +   +     + ++++YN +I GLC  G +D A  L   M +     P+VI F
Sbjct: 309 KFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFF 368

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKV-MPDASIVSMVVD 374
            TLI GF +  + S+  +LL +MK K + +PD    + ++D
Sbjct: 369 NTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLID 409



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 199/405 (49%), Gaps = 42/405 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT I GLCK G +DK   +  +M    I PDVVT+ S+I GLC AN  ++A ++
Sbjct: 185 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQV 244

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM--VQRDVRPNAFTYSTLMDGF 131
           F  M+++G  P  +T+++++D L +  ++D    +L+ M  ++       +T++  +   
Sbjct: 245 FKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGAL 304

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI-KPT 190
           C +GK   A+ +   M   G   + +SYN +I+G CK+  V++A  L R+M+  G  KP 
Sbjct: 305 CRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPD 364

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVA-ADTSTYNTFIDGLCKNGYIVEAVELF 249
           V+ +NTL  G  +  ++  A +L  EM+  ++   D  TYNT IDG  K G + +A  L 
Sbjct: 365 VIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLL 424

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + +  + C+ ++  Y  LI+G  K G  E A  LF  +  +    D++TYN ++      
Sbjct: 425 QEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKA 484

Query: 310 GQMDKAHDLFLDMEENA--VAPNVIIFVTLIHGFVRINK--------------------- 346
           G M KA  ++  ++      +P+ I +  LI G+ R                        
Sbjct: 485 GMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSY 544

Query: 347 ---------------PSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                          PSK + +  +M ++  +P ASI + +V L 
Sbjct: 545 TYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLF 589



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 186/363 (51%), Gaps = 7/363 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINP--DVVTYNSLIHGLCHANDWNE 69
           C P+++TY+ ++D L +   +D    +   M+        +V T+N+ I  LC +  +  
Sbjct: 253 CVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPL 312

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV-RPNAFTYSTLM 128
           AK +   M++ G  P+++++N ++D LCK+G +D+A +L   M+     +P+   ++TL+
Sbjct: 313 AKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLI 372

Query: 129 DGFCLTGKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
            GFC  G++++A +L   M++   C  D V+YN LI+G  K   +++A  L +EM + G 
Sbjct: 373 SGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGC 432

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP VVTY  L  G  +    E A  LF+EM       D  TYNT +    K G + +A  
Sbjct: 433 KPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEG 492

Query: 248 LFRTLG--ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           +++ L      C  D   Y  LIDG C++   E  L L + +  R    D  TYN++I  
Sbjct: 493 VYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAK 552

Query: 306 LCNDGQM-DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           L    ++  KA  ++  M +    P+  IF +L+  F+R    +    ++ +M EK  + 
Sbjct: 553 LAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGHLV 612

Query: 365 DAS 367
           DAS
Sbjct: 613 DAS 615



 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 138/288 (47%), Gaps = 2/288 (0%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M   G   SVVT+  ++D LCK+G +D A  LL  M      PN  TY+ L+DG C   +
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
            + A +    M   GC+ D V+YN LI+G C    +++A  + +E+V  G  P  +TY+T
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L +      +++ A  L  EM       +   Y   I G C+        E      +++
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 257 CEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D+  YN  I GLCK+G+L+  LE+   + R  +  DVVT+  +I GLC   ++D 
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           A  +F  M E    P+ + +  ++    R N+   V E+L  M+  K 
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKA 288



 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 139/260 (53%), Gaps = 10/260 (3%)

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TY+TL+DG C +G ++ A+ L   M   GC  + V+Y  LI+G CK +   +A+   + M
Sbjct: 12  TYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRM 71

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
           +  G +P +VTYN+L  GL   ++++ A  + +E+ R+  A +  TY+T +   C+   +
Sbjct: 72  LRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRL 131

Query: 243 VEAVELFRTLGILKCELDIQAY-NCLI---DGLCKSGRLEI--ALELFRSLPRRVLVADV 296
            +A  L R + +     ++  Y +C+    +  C+S R E     E+  S      + DV
Sbjct: 132 DQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIES----GRIPDV 187

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           VTYN  I GLC  G++DK  ++  +M+   + P+V+ F ++I G  + N+     ++   
Sbjct: 188 VTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKG 247

Query: 357 MKEKKVMPDASIVSMVVDLL 376
           M E+  +PD+   S+++D L
Sbjct: 248 MLERGCVPDSLTYSIMLDNL 267



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 112/220 (50%), Gaps = 3/220 (1%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +C P+ VTYNT+IDG  K G + +AK L  +M+     P+VVTY +LI+G      + EA
Sbjct: 396 ICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEA 455

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD--VRPNAFTYSTLM 128
           + LF EM  +G  P ++T+N ++    K G M +A  +   +  +     P+A TY  L+
Sbjct: 456 ESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILI 515

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV-EEALSLYREMVSKGI 187
           DG+C      +   L   M + G   D  +YN+LI    + +EV  +AL++Y++M+ +  
Sbjct: 516 DGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDC 575

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
            P+   +N+L         V  A  + +EM       D S
Sbjct: 576 VPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGHLVDAS 615



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 95/181 (52%), Gaps = 3/181 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
            V CKPN VTY  +I+G  K G  ++A++LF +M  +   PD++TYN+++     A   +
Sbjct: 429 AVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMS 488

Query: 69  EAKRLFFEMMDQG--VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           +A+ ++ ++ ++     P  +T+ +++D  C+    ++   LL  M  R    +++TY+ 
Sbjct: 489 KAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNV 548

Query: 127 LMDGFCLTGKI-NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           L+     T ++ ++A  ++  M    C      +N L+  + +  +V  A S+ +EM  K
Sbjct: 549 LIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEK 608

Query: 186 G 186
           G
Sbjct: 609 G 609


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/360 (31%), Positives = 176/360 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P T  ++ I+  L K        +LF Q +   + P++ T N LI+  CH      A  +
Sbjct: 91  PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSV 150

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  ++ +G  P  +T N ++  LC  G++  A    D +V +  + +  +Y TL++G C 
Sbjct: 151 FANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCK 210

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+      L   +E    K D V Y  +I+  CKNK V +A  LY EM+ KGI P V T
Sbjct: 211 AGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFT 270

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G   +  ++ A  L  EM+  ++  D  T+N  ID L K G I EA+ LF  + 
Sbjct: 271 YNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMK 330

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +I  Y  LIDGLCK+  LE A+ L + +  + +  DV +Y I++  LC  G+++
Sbjct: 331 HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 390

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A   F  +       NV  +  +I+G  +      V++L  KM+ K  MPDA     ++
Sbjct: 391 NAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTII 450



 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 178/344 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T N +I+  C    +  A ++F  +     +PD +T N+LI GLC   +   A   
Sbjct: 126 PNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYF 185

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++ QG Q   V++  +++ LCK G+    +RLL  +    V+P+   Y+T++   C 
Sbjct: 186 HDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCK 245

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++  A +L+  M   G   +  +YN LI G+C    ++EA SL  EM  K I P V T
Sbjct: 246 NKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYT 305

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L   L +  +++ A+ LFEEM+  ++  +  TY + IDGLCKN ++  A+ L + + 
Sbjct: 306 FNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMK 365

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+ +Y  L+D LCK GRLE A + F+ L  +    +V TYN+MI+GLC  G   
Sbjct: 366 EQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFG 425

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
              DL   ME     P+ I F T+I      ++  K  + L +M
Sbjct: 426 DVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREM 469



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 150/279 (53%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + V+Y T+I+GLCK G       L  +++G ++ PDVV Y ++IH LC      +A  L+
Sbjct: 197 DQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLY 256

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ +G+ P+V T+N ++   C  G + EA  LL+ M  +++ P+ +T++ L+D     
Sbjct: 257 SEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKE 316

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GKI+ A  LF  M+      + V+Y  LI+G CKN  +E A++L ++M  +GI+P V +Y
Sbjct: 317 GKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSY 376

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L   L +  ++E+A + F+ +       +  TYN  I+GLCK G   + ++L   +  
Sbjct: 377 TILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEG 436

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
             C  D   +  +I  L +    + A +  R +  R L+
Sbjct: 437 KGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGLL 475



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 148/303 (48%)

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+     P    F+ I+  L KN        L        V PN  T + L++ FC 
Sbjct: 81  FNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCH 140

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              I  A  +F ++   G   D ++ N LI G C   E++ AL  + ++V++G +   V+
Sbjct: 141 LAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVS 200

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  GL +  + +   +L  +++   V  D   Y T I  LCKN  + +A +L+  + 
Sbjct: 201 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMI 260

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +     ++  YN LI G C  G L+ A  L   +  + +  DV T+NI+I  L  +G++D
Sbjct: 261 VKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKID 320

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  LF +M+   + PN++ + +LI G  + +   + I L  KMKE+ + PD    ++++
Sbjct: 321 EAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILL 380

Query: 374 DLL 376
           D L
Sbjct: 381 DAL 383



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 119/224 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ V Y TII  LCK   V  A  L+ +M  + I+P+V TYN+LI+G C   +  EA  
Sbjct: 230 KPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFS 289

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  + + P V TFN+++D L K GK+DEA  L + M  +++ PN  TY++L+DG C
Sbjct: 290 LLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLC 349

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               + RA  L   M+  G + D  SY IL++  CK   +E A   ++ ++ KG    V 
Sbjct: 350 KNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVR 409

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           TYN +  GL +       + L  +M+      D  T+ T I  L
Sbjct: 410 TYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICAL 453



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 102/174 (58%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+N +ID L KEG +D+A +LF +MK +N+ P++VTY SLI GLC  +    A  L
Sbjct: 301 PDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIAL 360

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M +QG+QP V ++ +++D LCK G+++ A +    ++ +    N  TY+ +++G C 
Sbjct: 361 CKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCK 420

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
            G      +L   ME  GC  D +++  +I    +  E ++A    REM+++G+
Sbjct: 421 AGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGL 474


>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1163

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/369 (33%), Positives = 187/369 (50%), Gaps = 12/369 (3%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           +N++I    K G   ++  +F  MK   ++P VVT+NSL+  L      N A+ +F EM+
Sbjct: 159 FNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEML 218

Query: 79  DQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
              GV P   TFN+++   CKN  +DE  R    M +    P+  TY+TL+DG C  GK+
Sbjct: 219 STYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKV 278

Query: 138 NRAEELFGSM--ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           N A  +   M  +S     D V+Y  L+ GYC   E++EAL ++ EMVSKG+KP  +TYN
Sbjct: 279 NIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYN 338

Query: 196 TLFLGLFEIHQVEHALKLFE-EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           TL  GL E+ +++   ++FE  +       DT T NT ++  C  G + +A+E+F  + +
Sbjct: 339 TLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMV 398

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP-RRVLVAD------VVTYNIMIHGLC 307
           L    D   Y+ LI  LC+ G  E A +LF  L  + +L+ D      V  Y  M   LC
Sbjct: 399 LNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLC 458

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            +G+  KA  +F  + +     + + F  LI G  R        ELL  M  +  +PD  
Sbjct: 459 RNGKTAKAERVFRQLMKRGTQ-DPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLE 517

Query: 368 IVSMVVDLL 376
               ++D L
Sbjct: 518 TYQSLIDGL 526



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 204/385 (52%), Gaps = 14/385 (3%)

Query: 3   NGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGL 61
           N    +GV   P+ VT+N+++  L K G  + A+++F +M     + PD  T+N LI G 
Sbjct: 180 NSMKSVGV--SPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGF 237

Query: 62  CHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR--DVRP 119
           C  +  +E  R F EM      P +VT+N ++D LC+ GK++ A  +++ MV++  ++ P
Sbjct: 238 CKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNP 297

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           +  TY+TL+ G+C+  +I+ A  +F  M S G K ++++YN LI G C+ +++++   ++
Sbjct: 298 DVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIF 357

Query: 180 R-EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
              +   G  P   T NTL         +  AL++FE+M   +V  D++TY+  I  LC+
Sbjct: 358 EGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQ 417

Query: 239 NGYIVEAVELFRTLG----ILK---CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            G    A +LF  L     +L+   C   + AY  + + LC++G+   A  +FR L +R 
Sbjct: 418 RGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRG 477

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
              D +++ I+I G C +G  +  ++L + M      P++  + +LI G ++  +P    
Sbjct: 478 -TQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAY 536

Query: 352 ELLHKMKEKKVMPDASIVSMVVDLL 376
           + L KM +   +P+ S    ++  L
Sbjct: 537 QTLEKMIKSSHVPETSTFHSILARL 561



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 186/373 (49%), Gaps = 11/373 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T T+N +I G CK   VD+    F +M     +PD+VTYN+L+ GLC A   N A  +
Sbjct: 225 PDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNV 284

Query: 74  FFEMMDQG--VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
              M+ +   + P VVT+  ++   C   ++DEA  + + MV + ++PN  TY+TL+ G 
Sbjct: 285 VNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGL 344

Query: 132 CLTGKINRAEELF-GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           C   KI++ +++F G++   G   D  + N L+N +C    + +AL ++ +M+   ++P 
Sbjct: 345 CEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPD 404

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQ------RDDVAAD-TSTYNTFIDGLCKNGYIV 243
             TY+ L   L +    E A +LF+E+       RDD      + Y +  + LC+NG   
Sbjct: 405 SATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTA 464

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           +A  +FR L + +   D  ++  LI G C+ G  E   EL   + RR  V D+ TY  +I
Sbjct: 465 KAERVFRQL-MKRGTQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLI 523

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            GL   G+   A+     M +++  P    F +++   +      +    +  M E K+ 
Sbjct: 524 DGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAKGCAHESARFIMLMLEGKIR 583

Query: 364 PDASIVSMVVDLL 376
            + ++ +  V LL
Sbjct: 584 QNINLSTHTVRLL 596



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 112/206 (54%), Gaps = 3/206 (1%)

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
           K +D  +N LI  Y K    +E++ ++  M S G+ P+VVT+N+L L L +  +   A  
Sbjct: 153 KLEDRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQS 212

Query: 213 LFEEM-QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
           +F+EM     V  DT T+N  I G CKN  + E    F+ +   KC+ D+  YN L+DGL
Sbjct: 213 VFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGL 272

Query: 272 CKSGRLEIALELFRSLPRRV--LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           C++G++ IA  +   + ++   L  DVVTY  ++ G C   ++D+A  +F +M    + P
Sbjct: 273 CRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKP 332

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLH 355
           N I + TLI G   + K  K+ ++  
Sbjct: 333 NEITYNTLIKGLCEVQKIDKIKQIFE 358



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 150/350 (42%), Gaps = 76/350 (21%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFL-QMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           KPN +TYNT+I GLC+   +DK K +F   + G    PD  T N+L++  C+A + N+A 
Sbjct: 331 KPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDAL 390

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV-------RPNAFTY 124
            +F +MM   V+P   T++V++  LC+ G  + A +L D + ++++        P    Y
Sbjct: 391 EVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAY 450

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
            ++ +  C  GK  +AE +F  +   G + D +S+ ILI G+C+    E    L   M+ 
Sbjct: 451 KSMFEFLCRNGKTAKAERVFRQLMKRGTQ-DPLSFKILIKGHCREGTFEAGYELLVLMLR 509

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK------ 238
           +   P + TY +L  GL +  +   A +  E+M +     +TST+++ +  L        
Sbjct: 510 RDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAKGCAHE 569

Query: 239 ---------------------------------------------NGYIVEAVELFRTLG 253
                                                        NGY+V+  EL   L 
Sbjct: 570 SARFIMLMLEGKIRQNINLSTHTVRLLFGSGLRDKAFKIVGLLYANGYVVDMEELIGFLS 629

Query: 254 -----------ILKC-----ELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
                      +L C      +DI   + +I+GLCK  R   A  L+  L
Sbjct: 630 HNRKFLLAHKLLLFCLEKHQNVDIDMCDTVIEGLCKMKRHSEAFGLYYEL 679



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 38/207 (18%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + +++  +I G C+EG  +    L + M   +  PD+ TY SLI GL    +   A +  
Sbjct: 480 DPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTL 539

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN-------------- 120
            +M+     P   TF+ I+  L   G   E++R + LM++  +R N              
Sbjct: 540 EKMIKSSHVPETSTFHSILARLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLFGS 599

Query: 121 -----AFTYSTLMDGFCLTGKINRAEELFGSMES-----------MGC--KHDDVSYNI- 161
                AF    L+      G +   EEL G +             + C  KH +V  ++ 
Sbjct: 600 GLRDKAFKIVGLLYA---NGYVVDMEELIGFLSHNRKFLLAHKLLLFCLEKHQNVDIDMC 656

Query: 162 --LINGYCKNKEVEEALSLYREMVSKG 186
             +I G CK K   EA  LY E+V KG
Sbjct: 657 DTVIEGLCKMKRHSEAFGLYYELVEKG 683


>gi|359476071|ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 629

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 180/352 (51%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  +Y  ++ G  KEG  ++A  +  +MK +   P+V+TY  ++  LC      +A  + 
Sbjct: 149 NAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDIL 208

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M  +G  P +VT+NVI+ EL    +  E   LL ++ Q+++ P++FTY+ L  G    
Sbjct: 209 GKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALTGGLLKR 268

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            ++  A +L   + S GC  D   YNI  +  C+  +  EALSL + MV KG+ PT V+Y
Sbjct: 269 DQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPTNVSY 328

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           NT+  G    + ++ AL+LF+  +  + + D  ++NT +   CK G       +   +  
Sbjct: 329 NTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEY 388

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              +L++ +  CLI   C  G++   LEL  S+ R  L   VVT+N+++  LC +G +  
Sbjct: 389 EGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGT 448

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           AH +F +       PN   +  LIH  +R    S V +LL  M   ++ PDA
Sbjct: 449 AHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDA 500



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 162/355 (45%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTYN I+  L  +    +   L   +  + I+PD  TY +L  GL   +    A 
Sbjct: 216 CDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALTGGLLKRDQVRVAN 275

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   ++  G    V  +N+    LC+  K  EA  LL  MV++ + P   +Y+T+++GF
Sbjct: 276 KLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPTNVSYNTILNGF 335

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    I+ A +LF   E      D VS+N +++  CK         +   M  +G+K  V
Sbjct: 336 CRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNV 395

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+   L      I ++   L+L E M R+ +     T+N  +D LCKNG +  A  +FR 
Sbjct: 396 VSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFRE 455

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                   +  +YN LI    + G   +  +L R +    L  D VTY   I GLC +G+
Sbjct: 456 FRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEGK 515

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +  A  L   M E+ + P + I+ T++    +  K   ++ LL  M      P+A
Sbjct: 516 ISVAIQLRDQMLESGLTPTITIYNTILAAMFQRGKFWDIVSLLKDMTMDGCEPNA 570



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 146/320 (45%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P++ TY  +  GL K   V  A  L L +       DV  YN   H LC  N   EA  
Sbjct: 252 SPDSFTYAALTGGLLKRDQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALS 311

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+++G+ P+ V++N I++  C+   +DEA +L D     +  P+  +++T++   C
Sbjct: 312 LLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAAC 371

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  +    +   ME  G K + VS   LI  +C   ++ E L L   M+  G+ PTVV
Sbjct: 372 KQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVV 431

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N L   L +   +  A ++F E +      +T++YN  I    + G      +L R +
Sbjct: 432 TFNMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDM 491

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              + + D   Y   I GLCK G++ +A++L   +    L   +  YN ++  +   G+ 
Sbjct: 492 YSWRLKPDAVTYGSFIKGLCKEGKISVAIQLRDQMLESGLTPTITIYNTILAAMFQRGKF 551

Query: 313 DKAHDLFLDMEENAVAPNVI 332
                L  DM  +   PN +
Sbjct: 552 WDIVSLLKDMTMDGCEPNAV 571



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 159/366 (43%), Gaps = 6/366 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   T N +I  L K G   +A  +F  + G+       +YN ++  LC       A  L
Sbjct: 78  PTEPTLNLLISMLSKAGMAREAHFVFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALAL 137

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            + +   G   +  ++  ++    K G  +EA  +LD M     +PN  TY+ ++   C 
Sbjct: 138 LYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCD 197

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+I  A ++ G M   GC  D V+YN+++          E   L + +  K I P   T
Sbjct: 198 EGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFT 257

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL- 252
           Y  L  GL +  QV  A KL   +       D + YN +   LC+     EA+ L +++ 
Sbjct: 258 YAALTGGLLKRDQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMV 317

Query: 253 --GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             G++   +   +YN +++G C+   ++ AL+LF          DVV++N ++   C  G
Sbjct: 318 EKGLVPTNV---SYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQG 374

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
                  +   ME   V  NV+    LI  F  I K S+ +ELL  M    + P     +
Sbjct: 375 NSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFN 434

Query: 371 MVVDLL 376
           M++D L
Sbjct: 435 MLLDKL 440



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 131/252 (51%), Gaps = 2/252 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E G+V  P  V+YNTI++G C+E  +D+A  LF   +  N +PDVV++N+++   C   +
Sbjct: 318 EKGLV--PTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGN 375

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            +  +R+ + M  +GV+ +VV+   ++   C  GK+ E   LL+ M++  + P   T++ 
Sbjct: 376 SSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNM 435

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+D  C  G +  A  +F    + G   +  SYNILI+   +         L R+M S  
Sbjct: 436 LLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWR 495

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +KP  VTY +   GL +  ++  A++L ++M    +    + YNT +  + + G   + V
Sbjct: 496 LKPDAVTYGSFIKGLCKEGKISVAIQLRDQMLESGLTPTITIYNTILAAMFQRGKFWDIV 555

Query: 247 ELFRTLGILKCE 258
            L + + +  CE
Sbjct: 556 SLLKDMTMDGCE 567



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 152/352 (43%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T+N ++DG+   G +  A     +M      P   +   ++          ++  +
Sbjct: 8   PNASTFNILLDGMTSTGNLRAAFFFAEEMWRSGFLPSFTSLLKILKKWLGLGSLVDSMSV 67

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+     P+  T N+++  L K G   EA  +  +++ +     A +Y+ ++   C 
Sbjct: 68  FEFMLRLEYFPTEPTLNLLISMLSKAGMAREAHFVFRVLLGKGCLKCAHSYNPILWALCK 127

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A  L  S++ MG  H+  SY  L+ G+ K    EEA  +  EM   G KP V+T
Sbjct: 128 CGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVIT 187

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  +   L +  ++  AL +  +M ++    D  TYN  +  L      VE  EL + + 
Sbjct: 188 YTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVID 247

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +   D   Y  L  GL K  ++ +A +L   +       DV  YNI  H LC + +  
Sbjct: 248 QKEISPDSFTYAALTGGLLKRDQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSG 307

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +A  L   M E  + P  + + T+++GF R N   + ++L    +     PD
Sbjct: 308 EALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPD 359



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 126/280 (45%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           I   C  +   YN     LC+E    +A +L   M  + + P  V+YN++++G C  N  
Sbjct: 282 ISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCRENHI 341

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +EA +LF         P VV+FN I+   CK G      R+L  M    V+ N  + + L
Sbjct: 342 DEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCL 401

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +  FC  GKI+   EL  SM   G     V++N+L++  CKN  +  A  ++RE  + G 
Sbjct: 402 IQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTGY 461

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P   +YN L              +L  +M    +  D  TY +FI GLCK G I  A++
Sbjct: 462 FPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEGKISVAIQ 521

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           L   +        I  YN ++  + + G+    + L + +
Sbjct: 522 LRDQMLESGLTPTITIYNTILAAMFQRGKFWDIVSLLKDM 561



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 127/323 (39%), Gaps = 35/323 (10%)

Query: 77  MMDQGVQPSVVTFNVIMD----------------ELCKNGKMDEASRLL----------- 109
           M   G  P+  TFN+++D                E+ ++G +   + LL           
Sbjct: 1   MKRLGPYPNASTFNILLDGMTSTGNLRAAFFFAEEMWRSGFLPSFTSLLKILKKWLGLGS 60

Query: 110 --------DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
                   + M++ +  P   T + L+      G    A  +F  +   GC     SYN 
Sbjct: 61  LVDSMSVFEFMLRLEYFPTEPTLNLLISMLSKAGMAREAHFVFRVLLGKGCLKCAHSYNP 120

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           ++   CK  +   AL+L   +   G      +Y  L  G  +    E A  + +EM+ D 
Sbjct: 121 ILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDG 180

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              +  TY   +  LC  G I +A+++   +G   C+ DI  YN ++  L    R     
Sbjct: 181 CKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIG 240

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           EL + + ++ +  D  TY  +  GL    Q+  A+ L L +       +V ++    H  
Sbjct: 241 ELLQVIDQKEISPDSFTYAALTGGLLKRDQVRVANKLLLYVISAGCTVDVAVYNIYFHCL 300

Query: 342 VRINKPSKVIELLHKMKEKKVMP 364
            R NK  + + LL  M EK ++P
Sbjct: 301 CRENKSGEALSLLQSMVEKGLVP 323



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 6/222 (2%)

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M+ +G   +  ++NIL++G      +  A     EM   G  P+  +   +      +  
Sbjct: 1   MKRLGPYPNASTFNILLDGMTSTGNLRAAFFFAEEMWRSGFLPSFTSLLKILKKWLGLGS 60

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQA 263
           +  ++ +FE M R +      T N  I  L K G   EA  +FR L   G LKC     +
Sbjct: 61  LVDSMSVFEFMLRLEYFPTEPTLNLLISMLSKAGMAREAHFVFRVLLGKGCLKCA---HS 117

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
           YN ++  LCK G+   AL L  SL +   V +  +Y  +++G   +G  ++A  +  +M+
Sbjct: 118 YNPILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMK 177

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +   PNVI +  ++       +    +++L KM ++   PD
Sbjct: 178 IDGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPD 219



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY + I GLCKEG +  A  L  QM    + P +  YN+++  +     + +   
Sbjct: 497 KPDAVTYGSFIKGLCKEGKISVAIQLRDQMLESGLTPTITIYNTILAAMFQRGKFWDIVS 556

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           L  +M   G +P+ V+  ++   + K   M      ++L V     P+   +S L
Sbjct: 557 LLKDMTMDGCEPNAVSIEILKQAMSKCW-MKRFPEFIELWVVHLSGPDITIWSEL 610


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 176/357 (49%), Gaps = 2/357 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN-INPDVVTYNSLIHGLCHANDWNEAK 71
           +PN VTYNT+I G C  G V  A  +  +M+    I PD  TY +LI G C      +A 
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAV 203

Query: 72  RLFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           ++F EM+ +G V PS V +N ++   C  GK+D A +  + MVQR +     TY+ LM  
Sbjct: 204 KVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHA 263

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
             +  + + A  +   M+  G   D  +YNILINGYCK    ++AL ++ EM  KG++ T
Sbjct: 264 LFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRAT 323

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            VTY +L        QV+   +LF    +  +  D   YN  I+  C  G +  A E+  
Sbjct: 324 AVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMA 383

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +   +   D   YN L+ G C  GRL+ A  L   + +R +  D+V+YN +I G    G
Sbjct: 384 EMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKG 443

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            +  A  +  +M +    P ++ +  LI G  +I +      L+ +M  K + PD S
Sbjct: 444 DIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDS 500



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 128/223 (57%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN +I+G CKEG   KA  +F +M  + +    VTY SLI+         E  RL
Sbjct: 287 PDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRL 346

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F   + +G++P VV +N +++  C  G M+ A  ++  M ++ + P+  TY+TLM GFCL
Sbjct: 347 FNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCL 406

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A  L   M   G + D VSYN LI+GY    ++++AL +  EM+ KG  PT++T
Sbjct: 407 LGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMT 466

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           YN L  GL +I Q + A  L +EM    +  D STY + I+GL
Sbjct: 467 YNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 173/365 (47%), Gaps = 45/365 (12%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           L+ Q+K  ++   V + + L+  L  A     A  LF ++    +     TFN+++  LC
Sbjct: 72  LYAQLKSLSVPIPVASLHPLLSSLPSA----PAFALFADIYRLRLPLCTTTFNIMLRHLC 127

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM-ESMGCKHDD 156
             GK     R L+L+ Q   RPNA TY+T++ GFC  G++  A E+   M E  G   D 
Sbjct: 128 ATGK---PVRALELLRQMP-RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDK 183

Query: 157 VSYNILINGYCKNKEVEEALSL-----------------------------------YRE 181
            +Y  LI+G+CK   +E+A+ +                                   YRE
Sbjct: 184 YTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYRE 243

Query: 182 -MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            MV +GI  TV TYN L   LF   +   A  + EEMQ++  + D  TYN  I+G CK G
Sbjct: 244 DMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEG 303

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
              +A+E+F  +           Y  LI    + G+++    LF    ++ +  DVV YN
Sbjct: 304 NEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYN 363

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +I+  C  G M++A+++  +ME+  + P+ + + TL+ GF  + +  +   L+ +M ++
Sbjct: 364 ALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKR 423

Query: 361 KVMPD 365
            + PD
Sbjct: 424 GIQPD 428



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 144/298 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V YN +I G C  G +D A      M    I   V TYN L+H L      ++A  +
Sbjct: 217 PSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAV 276

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G  P V T+N++++  CK G   +A  + + M Q+ VR  A TY++L+  F  
Sbjct: 277 LEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSR 336

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++   + LF      G + D V YN LIN +C   ++E A  +  EM  K I P  +T
Sbjct: 337 KGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMT 396

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YNTL  G   + +++ A  L +EM +  +  D  +YNT I G    G I +A+ +   + 
Sbjct: 397 YNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMM 456

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                  +  YN LI GLCK  + + A  L + +  + +  D  TY  +I GL  + +
Sbjct: 457 DKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTEDE 514



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 116/213 (54%), Gaps = 8/213 (3%)

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            ++NI++   C   +   AL L R+M     +P  VTYNT+  G     +V+ AL++  E
Sbjct: 117 TTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMRE 172

Query: 217 M-QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQA--YNCLIDGLCK 273
           M +R  +A D  TY T I G CK G + +AV++F  + + K E+   A  YN LI G C 
Sbjct: 173 MRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEM-LTKGEVAPSAVMYNALIGGYCD 231

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
            G+L++AL+    + +R +   V TYN+++H L  D +   A+ +  +M++N  +P+V  
Sbjct: 232 VGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFT 291

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +  LI+G+ +     K +E+  +M +K V   A
Sbjct: 292 YNILINGYCKEGNEKKALEVFEEMSQKGVRATA 324



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 85/159 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V YN +I+  C  G +++A  +  +M+ + I PD +TYN+L+ G C     +EA+ 
Sbjct: 356 RPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEART 415

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  +G+QP +V++N ++      G + +A R+ D M+ +   P   TY+ L+ G C
Sbjct: 416 LIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLC 475

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
              + + AE L   M + G   DD +Y  LI G     E
Sbjct: 476 KIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTEDE 514



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 83/166 (50%), Gaps = 10/166 (6%)

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           +L+L+ +++   V    ++ +  +  L        A  LF  +  L+  L    +N ++ 
Sbjct: 69  SLRLYAQLKSLSVPIPVASLHPLLSSLPS----APAFALFADIYRLRLPLCTTTFNIMLR 124

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN-AVA 328
            LC +G+   ALEL R +PR     + VTYN +I G C  G++  A ++  +M E   +A
Sbjct: 125 HLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIA 180

Query: 329 PNVIIFVTLIHGFVRINKPSKVIELLHKMKEK-KVMPDASIVSMVV 373
           P+   + TLI G+ +I +    +++  +M  K +V P A + + ++
Sbjct: 181 PDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALI 226


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 180/349 (51%), Gaps = 1/349 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y   IDGLCK  +V +A  +  +M  + + P+V T+ SLI+GLC       A RL
Sbjct: 253 PNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRL 312

Query: 74  FFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           F +++     +P+V T+ V++   CK GK+  A  LL  MV++ + PN  TY+TL+ G C
Sbjct: 313 FLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHC 372

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  N A EL   M   G + +  +YN LI+G CK  +++EA  + R   ++G++   V
Sbjct: 373 KEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKV 432

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  +     +   + +AL LF  M  +    D  TY T I   C+   + E+ +LF   
Sbjct: 433 TYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKC 492

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             ++     Q Y  +I G CK G+   AL +F  + +    AD +TY  +I GLC + ++
Sbjct: 493 LAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRL 552

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
           ++A  L+  M +  + P  +  VTL   + R  K    + +L ++ +++
Sbjct: 553 EEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDKRR 601



 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 175/354 (49%), Gaps = 1/354 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  ++  +I G C++G +++  AL   M+G+    D  T   ++   C    + +   L
Sbjct: 183 PDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSEL 242

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M++ G  P+VV +   +D LCK   + +A  +L+ MV + ++PN +T+++L++G C 
Sbjct: 243 FRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCK 302

Query: 134 TGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            G   RA  LF  + +S   K +  +Y ++I GYCK  ++  A  L   MV +G+ P   
Sbjct: 303 IGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTN 362

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  G  +      A +L  +M+R+    +  TYN  IDGLCK G I EA ++ R  
Sbjct: 363 TYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMA 422

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                +LD   Y  +I   CK G +  AL+LF  +       D+ TY  +I   C   QM
Sbjct: 423 NNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQM 482

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +++  LF       + P    + ++I G+ ++ K +  + +  +M +     D+
Sbjct: 483 EESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADS 536



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 150/287 (52%), Gaps = 1/287 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNEAK 71
           KPN  T+ ++I+GLCK G+ ++A  LFL++ K  +  P+V TY  +I G C       A+
Sbjct: 287 KPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAE 346

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M++QG+ P+  T+  ++   CK G  + A  L++ M +   +PN +TY+ L+DG 
Sbjct: 347 MLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGL 406

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GKI  A ++     + G + D V+Y ++I  +CK   +  AL L+  M   G  P +
Sbjct: 407 CKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDI 466

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY TL     +  Q+E + KLF++    ++     TY + I G CK G    A+ +F  
Sbjct: 467 HTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFER 526

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           +    C+ D   Y  LI GLCK  RLE A  L+  +  + LV   VT
Sbjct: 527 MVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVT 573



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 168/351 (47%), Gaps = 1/351 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +  T   I+   C++G       LF +M      P+VV Y + I GLC      +A  + 
Sbjct: 219 DNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVL 278

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL-LDLMVQRDVRPNAFTYSTLMDGFCL 133
            EM+ +G++P+V T   +++ LCK G  + A RL L L+     +PN  TY+ ++ G+C 
Sbjct: 279 EEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCK 338

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+ RAE L G M   G   +  +Y  LI+G+CK      A  L  +M  +G +P + T
Sbjct: 339 EGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYT 398

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  GL +  +++ A K+        +  D  TY   I   CK G+I  A++LF  + 
Sbjct: 399 YNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMA 458

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  DI  Y  LI   C+  ++E + +LF       LV    TY  MI G C  G+  
Sbjct: 459 ENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKST 518

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            A  +F  M +N    + I +  LI G  + ++  +   L   M +K+++P
Sbjct: 519 SALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVP 569



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 163/311 (52%), Gaps = 10/311 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN  TY  +I G CKEG + +A+ L  +M  + + P+  TY +LI G C    +N A  
Sbjct: 323 KPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFE 382

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M  +G QP++ T+N ++D LCK GK+ EA ++L +   + ++ +  TY+ ++   C
Sbjct: 383 LMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHC 442

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G I  A +LF  M   GC  D  +Y  LI  YC+ +++EE+  L+ + ++  + PT  
Sbjct: 443 KQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQ 502

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY ++  G  ++ +   AL++FE M ++   AD+ TY   I GLCK   + EA  L+  +
Sbjct: 503 TYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGM 562

Query: 253 ---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
               ++ CE+       L    C+  +  +A+ +   L +R       T N+++  L   
Sbjct: 563 LDKRLVPCEVTPVT---LAFEYCRREKAVVAVSILDRLDKR---RKNHTVNVLVRKLSAI 616

Query: 310 GQMDKAHDLFL 320
           G ++ A  LFL
Sbjct: 617 GHVEDA-SLFL 626



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 173/380 (45%), Gaps = 37/380 (9%)

Query: 22  IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG 81
           ++    + G + +A  +  +M+   +   V T N ++        +  A+++F  M+ +G
Sbjct: 120 MVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRG 179

Query: 82  -VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
            + P   +F  ++   C++G+M+E   LL +M  +    +  T + ++  FC  G+    
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDV 239

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
            ELF  M  MG   + V+Y   I+G CK   V++A  +  EMV+KG+KP V T+ +L  G
Sbjct: 240 SELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLING 299

Query: 201 LFEIHQVEHALKLF------------------------------------EEMQRDDVAA 224
           L +I   E A +LF                                      M    +A 
Sbjct: 300 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 359

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           +T+TY T I G CK G    A EL   +     + +I  YN LIDGLCK G+++ A ++ 
Sbjct: 360 NTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVL 419

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
           R    + L  D VTY +MI   C  G +  A DLF  M EN   P++  + TLI  + + 
Sbjct: 420 RMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQ 479

Query: 345 NKPSKVIELLHKMKEKKVMP 364
            +  +  +L  K    +++P
Sbjct: 480 RQMEESQKLFDKCLAIELVP 499



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 139/305 (45%), Gaps = 38/305 (12%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNT TY T+I G CKEG  + A  L  +M+ E   P++ TYN+LI GLC      EA ++
Sbjct: 359 PNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKV 418

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNG--------------------------------- 100
                +QG+Q   VT+ V++ E CK G                                 
Sbjct: 419 LRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQ 478

Query: 101 --KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
             +M+E+ +L D  +  ++ P   TY++++ G+C  GK   A  +F  M   GC+ D ++
Sbjct: 479 QRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSIT 538

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           Y  LI+G CK   +EEA +LY  M+ K + P  VT  TL    FE  + E A+     + 
Sbjct: 539 YGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTL---AFEYCRREKAVVAVSILD 595

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
           R D      T N  +  L   G++ +A    +    +   +D  AY   I+    + +  
Sbjct: 596 RLDKRRKNHTVNVLVRKLSAIGHVEDASLFLKKALDVDLAVDRLAYTSFINSCYANKKYA 655

Query: 279 IALEL 283
           +A E+
Sbjct: 656 LATEI 660



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 3/164 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TY T+I   C++  +++++ LF +     + P   TY S+I G C       A 
Sbjct: 462 CHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSAL 521

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           R+F  M+  G Q   +T+  ++  LCK  +++EA  L + M+ + + P   T  TL   +
Sbjct: 522 RVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEY 581

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
           C   K   A  +   ++     H   + N+L+        VE+A
Sbjct: 582 CRREKAVVAVSILDRLDKRRKNH---TVNVLVRKLSAIGHVEDA 622


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 188/359 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  + +N I+  L K         L  +M+   I P++V  N LI+  C       A  +
Sbjct: 85  PPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 144

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +++  G  P+ +TF  ++  LC  G++ +A    D +V    + N  +Y TL+DG C 
Sbjct: 145 FAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCK 204

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A +L   ++    + + V Y+ +I+G CK+K V +A  LY EMVSKGI P VVT
Sbjct: 205 VGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVT 264

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  G F + +++ A+ LF +M  +++  D  T+N  +D  CK+G I  A++L   + 
Sbjct: 265 YSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMH 324

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +I  Y+ ++D LCK+ R++ A+ L   L  + +  ++ TY I+I GLC  G+++
Sbjct: 325 DRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLE 384

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            A ++F D+        V+ ++ + +GF +     +   LL KM+E   +PDA    ++
Sbjct: 385 DARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELI 443



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 106/318 (33%), Positives = 173/318 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V  N +I+  C+ G +  A ++F ++     NP+ +T+ +LI GLC     ++A  
Sbjct: 119 KPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALN 178

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +++  G Q + +++  ++D LCK G+   A  LL  +  + V+PN   YST++DG C
Sbjct: 179 FHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMC 238

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +N A +L+  M S G   + V+Y+ LI+G+    ++++A+ L+ +M+S+ IKP V 
Sbjct: 239 KDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVY 298

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+N L     +  ++ +ALKL +EM       +  TY++ +D LCK   + +AV L   L
Sbjct: 299 TFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKL 358

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++  Y  LIDGLC SG+LE A  +F  L  +     VVTY +M +G C  G  
Sbjct: 359 KDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLF 418

Query: 313 DKAHDLFLDMEENAVAPN 330
           D+A  L   MEEN   P+
Sbjct: 419 DEASALLSKMEENGCIPD 436



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 163/310 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNT+T+ T+I GLC +G + +A     ++       + ++Y +LI GLC   +   A  L
Sbjct: 155 PNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDL 214

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              +  + VQP+VV ++ I+D +CK+  +++A  L   MV + + PN  TYS L+ GF  
Sbjct: 215 LRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFT 274

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A +LF  M S   K D  ++NIL++ +CK+ ++  AL L  EM  +G  P +VT
Sbjct: 275 VGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVT 334

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+++   L + H+V+ A+ L  +++   +  +  TY   IDGLC +G + +A  +F  L 
Sbjct: 335 YSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLL 394

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   ++ +  Y  +  G CK G  + A  L   +     + D  TY ++   L   G+ D
Sbjct: 395 VKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGEND 454

Query: 314 KAHDLFLDME 323
            A  L  + E
Sbjct: 455 MAEKLHRECE 464



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 171/328 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N + Y++          VD A +LF  +  +N  P  + +N ++  L  +  ++    
Sbjct: 49  KINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLY 108

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M  +G++P++V  N++++  C+ G +  A  +   +++    PN  T++TL+ G C
Sbjct: 109 LSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLC 168

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L G+I++A      + ++G + + +SY  LI+G CK  E   AL L R +  K ++P VV
Sbjct: 169 LKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVV 228

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+T+  G+ +   V  A  L+ EM    ++ +  TY+  I G    G + +AV+LF  +
Sbjct: 229 MYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKM 288

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + D+  +N L+D  CKSG++  AL+L   +  R    ++VTY+ ++  LC   ++
Sbjct: 289 ISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRV 348

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           DKA  L   +++  + PN+  +  LI G
Sbjct: 349 DKAVALLTKLKDQGIRPNMHTYTILIDG 376



 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 81/232 (34%), Positives = 136/232 (58%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G + +PN V Y+TIIDG+CK+  V+ A  L+ +M  + I+P+VVTY++LI G        
Sbjct: 220 GKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLK 279

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           +A  LF +M+ + ++P V TFN+++D  CK+GK+  A +L+D M  R   PN  TYS+++
Sbjct: 280 DAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSIL 339

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           D  C T ++++A  L   ++  G + +  +Y ILI+G C + ++E+A +++ +++ KG  
Sbjct: 340 DALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYD 399

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
            TVVTY  +F G  +    + A  L  +M+ +    D  TY      L K G
Sbjct: 400 ITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKG 451



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 167/336 (49%), Gaps = 2/336 (0%)

Query: 39  FLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
           F+      IN  ++ Y+S        ND ++A  LF  ++ Q   P  + FN I+  L K
Sbjct: 42  FIPCSSSKIN--LIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVK 99

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           +        L   M  R ++PN    + L++ FC  G I  A  +F  +  MG   + ++
Sbjct: 100 SKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTIT 159

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +  LI G C   ++ +AL+ + ++V+ G +   ++Y TL  GL ++ +   AL L   + 
Sbjct: 160 FTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVD 219

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              V  +   Y+T IDG+CK+ ++ +A +L+  +       ++  Y+ LI G    G+L+
Sbjct: 220 GKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLK 279

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A++LF  +    +  DV T+NI++   C  G++  A  L  +M +    PN++ + +++
Sbjct: 280 DAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSIL 339

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
               + ++  K + LL K+K++ + P+    ++++D
Sbjct: 340 DALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILID 375



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 127/257 (49%)

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
           N   YS+    F     ++ A  LF  +         + +N ++    K+K     L L 
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
           ++M  +GIKP +V  N L     ++  +  A  +F ++ +     +T T+ T I GLC  
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G I +A+     L  L  + +  +Y  LIDGLCK G    AL+L R +  +++  +VV Y
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           + +I G+C D  ++ A DL+ +M    ++PNV+ +  LI GF  + K    ++L +KM  
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290

Query: 360 KKVMPDASIVSMVVDLL 376
           + + PD    +++VD+ 
Sbjct: 291 ENIKPDVYTFNILVDVF 307



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 140/278 (50%)

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           N  +D+A  L + +++++  P A  ++ ++     +   +    L   ME  G K + V+
Sbjct: 65  NNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVN 124

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
            NILIN +C+   +  A S++ +++  G  P  +T+ TL  GL    Q+  AL   +++ 
Sbjct: 125 CNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLV 184

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                 +  +Y T IDGLCK G    A++L R +     + ++  Y+ +IDG+CK   + 
Sbjct: 185 ALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVN 244

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A +L+  +  + +  +VVTY+ +I G    G++  A DLF  M    + P+V  F  L+
Sbjct: 245 DAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILV 304

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             F +  K S  ++L+ +M ++   P+    S ++D L
Sbjct: 305 DVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDAL 342


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 193/365 (52%), Gaps = 1/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V++N+I+  L K+  VD+A  LF  MK ++  P+  TYN +I  LC A    EA 
Sbjct: 353 CIPSVVSFNSILTCLGKKRKVDEALTLFEAMK-KDAEPNSSTYNIIIDMLCMAGKVEEAY 411

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  EM   G+ P+++T N+++D LCK  K + A  + +   QR   PN+ TY +L+DG 
Sbjct: 412 MIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGL 471

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G ++ A  LF +M   G   + V Y  LI  +  +   E+   +++EM  +G +P +
Sbjct: 472 GKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDL 531

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
              NT    +F+   VE    +FE+++      D  +Y+  I GL K G   E   +F  
Sbjct: 532 TLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHA 591

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +      LD +AYN ++DG CKSG+L+ A E+   +  + +   V TY  +I GL    +
Sbjct: 592 MKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDR 651

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A+ LF + +   +  NVI++ +LI GF ++ +  +   +L +M +K + P+    + 
Sbjct: 652 LDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 711

Query: 372 VVDLL 376
           ++D L
Sbjct: 712 LMDAL 716



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 194/403 (48%), Gaps = 36/403 (8%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G   +P+ V YN  ID   K G VD A   F ++K + + PD V+Y S+I  LC A   +
Sbjct: 245 GSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLS 304

Query: 69  EAKRLF-------------------------------FEMMDQ----GVQPSVVTFNVIM 93
           EA+ LF                               ++++DQ    G  PSVV+FN I+
Sbjct: 305 EAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSIL 364

Query: 94  DELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCK 153
             L K  K+DEA  L + M ++D  PN+ TY+ ++D  C+ GK+  A  +   ME  G  
Sbjct: 365 TCLGKKRKVDEALTLFEAM-KKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLF 423

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            + ++ NI+++  CK K+ E A  ++     +G  P  VTY +L  GL +   V+ A +L
Sbjct: 424 PNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRL 483

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
           FE M      A+   Y + I     +G   +  ++F+ +    C+ D+   N  +D + K
Sbjct: 484 FENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFK 543

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           +G +E    +F  +     + DV +Y+I+IHGL   GQ  +   +F  M++   A +   
Sbjct: 544 AGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARA 603

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +  ++ GF +  K  K  E+L +MK K+V P  +    ++D L
Sbjct: 604 YNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGL 646



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 186/364 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN+ TYN IID LC  G V++A  +  +M+   + P+++T N ++  LC A  +  A  
Sbjct: 388 EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYE 447

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F     +G  P+ VT+  ++D L K G +D+A RL + M+      N   Y++L+  F 
Sbjct: 448 MFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFF 507

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + G+     ++F  M   GC+ D    N  ++   K  +VE+  +++ ++   G  P V 
Sbjct: 508 MHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVR 567

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y+ L  GL +  Q      +F  M++   A D   YN  +DG CK+G + +A E+   +
Sbjct: 568 SYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEM 627

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            + +    +  Y  +IDGL K  RL+ A  LF     + +  +V+ Y+ +I G    G++
Sbjct: 628 KVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRI 687

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A+ +  +M +  + PNV  + +L+   V+  + ++ +     MKE K  P+    S++
Sbjct: 688 DEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSIL 747

Query: 373 VDLL 376
           ++ L
Sbjct: 748 INGL 751



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 184/388 (47%), Gaps = 42/388 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVTYNSLIHGLCHANDWNE 69
           C PN+VTY ++IDGL K+G VD A  LF  M   G N NP  V Y SLI          +
Sbjct: 457 CNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANP--VVYTSLIRNFFMHGRKED 514

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMD----------------------------------- 94
             ++F EM  +G QP +   N  MD                                   
Sbjct: 515 GHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIH 574

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
            L K G+  E S +   M Q+    +A  Y+ ++DGFC +GK+++A E+   M+      
Sbjct: 575 GLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPP 634

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
              +Y  +I+G  K   ++EA  L+ E  SKGI+  V+ Y++L  G  ++ +++ A  + 
Sbjct: 635 TVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLIL 694

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           EEM +  +  +  T+N+ +D L K   I EA+  F+++  +KC  +   Y+ LI+GLC+ 
Sbjct: 695 EEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRV 754

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            +   A   ++ + ++ LV +VVTY  MI GL   G +  A  LF   + N   P+   F
Sbjct: 755 QKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASF 814

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKV 362
             LI G    N   + IE  H  +E ++
Sbjct: 815 NALIEGMSHAN---RAIEAYHVFEETRL 839



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 152/263 (57%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
            YN ++DG CK G +DKA  +  +MK + + P V TY S+I GL   +  +EA  LF E 
Sbjct: 603 AYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEA 662

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
             +G++ +V+ ++ ++D   K G++DEA  +L+ M+++ + PN +T+++LMD      +I
Sbjct: 663 KSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEI 722

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           N A   F SM+ M C  +  +Y+ILING C+ ++  +A   ++EM  +G+ P VVTY T+
Sbjct: 723 NEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTM 782

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             GL ++  +  A  LFE  + +    D +++N  I+G+      +EA  +F    +  C
Sbjct: 783 IAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGC 842

Query: 258 ELDIQAYNCLIDGLCKSGRLEIA 280
            ++++A   L+D L K+  LE A
Sbjct: 843 RINVKACISLLDALNKAECLEQA 865



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 180/391 (46%), Gaps = 36/391 (9%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           + T++  L +EG V+ A AL  ++KG  + PD+V YN  I     A + + A + F E+ 
Sbjct: 220 FTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELK 279

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            QG++P  V++  ++  LCK G++ EA  L   M      P A+ Y+T++ G+   G+  
Sbjct: 280 SQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFE 339

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A +L   ++  GC    VS+N ++    K ++V+EAL+L+ E + K  +P   TYN + 
Sbjct: 340 NAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLF-EAMKKDAEPNSSTYNIII 398

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
             L    +VE A  + +EM+   +  +  T N  +D LCK      A E+F T     C 
Sbjct: 399 DMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCN 458

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY-----NIMIHGLCNDGQ-- 311
            +   Y  LIDGL K G ++ A  LF ++      A+ V Y     N  +HG   DG   
Sbjct: 459 PNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKI 518

Query: 312 ----------------------------MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
                                       ++K   +F D++     P+V  +  LIHG  +
Sbjct: 519 FKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTK 578

Query: 344 INKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +  +   + H MK++    DA   + VVD
Sbjct: 579 AGQARETSSIFHAMKQQGFALDARAYNAVVD 609



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 179/362 (49%), Gaps = 1/362 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P    Y  +I  + +    ++A  L  QM+       V  + +L+  L        A  
Sbjct: 179 RPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALA 238

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  E+    ++P +V +NV +D   K G +D A +    +  + ++P+  +Y++++   C
Sbjct: 239 LVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLC 298

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ AEELFG ME+        +YN +I GY    + E A  L  ++  +G  P+VV
Sbjct: 299 KAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVV 358

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           ++N++   L +  +V+ AL LFE M++ D   ++STYN  ID LC  G + EA  +   +
Sbjct: 359 SFNSILTCLGKKRKVDEALTLFEAMKK-DAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEM 417

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++   N ++D LCK+ + E A E+F +  +R    + VTY  +I GL   G +
Sbjct: 418 EHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNV 477

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A+ LF +M +     N +++ +LI  F    +     ++  +M  +   PD ++++  
Sbjct: 478 DDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTY 537

Query: 373 VD 374
           +D
Sbjct: 538 MD 539



 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 113/225 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TY +IIDGL K   +D+A  LF + K + I  +V+ Y+SLI G       +EA  +
Sbjct: 634 PTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLI 693

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EMM +G+ P+V T+N +MD L K  +++EA      M +    PN +TYS L++G C 
Sbjct: 694 LEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCR 753

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K N+A   +  M+  G   + V+Y  +I G  K   + +A SL+    + G  P   +
Sbjct: 754 VQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAAS 813

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
           +N L  G+   ++   A  +FEE +      +     + +D L K
Sbjct: 814 FNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNK 858



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 1/250 (0%)

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+     T +++ AE +  +M  +  +    +Y +LI    + ++ E AL L R+M   G
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            +  V  + TL   L    +VE AL L +E++   +  D   YN  ID   K G +  A 
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           + F  L     + D  +Y  +I  LCK+GRL  A ELF  +     V     YN MI G 
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            + GQ + A+ L   ++E    P+V+ F +++    +  K  + + L   MK K   P++
Sbjct: 333 GSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMK-KDAEPNS 391

Query: 367 SIVSMVVDLL 376
           S  ++++D+L
Sbjct: 392 STYNIIIDML 401



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 98/196 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N + Y+++IDG  K G +D+A  +  +M  + + P+V T+NSL+  L  A + NEA   F
Sbjct: 670 NVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICF 729

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M +    P+  T++++++ LC+  K ++A      M ++ + PN  TY+T++ G    
Sbjct: 730 QSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKV 789

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G I  A  LF   ++ G   D  S+N LI G        EA  ++ E   KG +  V   
Sbjct: 790 GNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKAC 849

Query: 195 NTLFLGLFEIHQVEHA 210
            +L   L +   +E A
Sbjct: 850 ISLLDALNKAECLEQA 865



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 104/230 (45%), Gaps = 2/230 (0%)

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
           E++   M  +G    + +   L++   + + +++A  +   M     +P    Y  L   
Sbjct: 132 EKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGA 191

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
           + E  Q E AL+L  +MQ          + T +  L + G +  A+ L   +     E D
Sbjct: 192 MAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPD 251

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           I  YN  ID   K+G +++A + F  L  + L  D V+Y  MI  LC  G++ +A +LF 
Sbjct: 252 IVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFG 311

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            ME     P    + T+I G+    +     +LL ++KE+  +P  S+VS
Sbjct: 312 QMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIP--SVVS 359



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 6/130 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNT TY+ +I+GLC+    +KA   + +M+ + + P+VVTY ++I GL    +  +A 
Sbjct: 737 CSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDAC 796

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF      G  P   +FN +++ +    +  EA  + +    +  R N     +L+D  
Sbjct: 797 SLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDA- 855

Query: 132 CLTGKINRAE 141
                +N+AE
Sbjct: 856 -----LNKAE 860



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 52/93 (55%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY T+I GL K G +  A +LF + K     PD  ++N+LI G+ HAN   EA  +
Sbjct: 774 PNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHV 833

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           F E   +G + +V     ++D L K   +++A+
Sbjct: 834 FEETRLKGCRINVKACISLLDALNKAECLEQAA 866


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 197/397 (49%), Gaps = 36/397 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+   YN +I G CK   VD A  +  +MK     PDVVTYN LI   C     + A R
Sbjct: 143 KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALR 202

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +++    +P+V+T+ ++++     G +DEA +LLD M+ R +RP+ +TY+ +++G C
Sbjct: 203 VMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMC 262

Query: 133 LTGKINRA-----------------------------------EELFGSMESMGCKHDDV 157
             G ++RA                                   E+L   M   GC+ + +
Sbjct: 263 KEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPI 322

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y+ LI   C++ +++EA ++ + M  K + P   +Y+ L   L    +V+ A++  ++M
Sbjct: 323 TYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDM 382

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
                  D  +YN+ +  LCKNG   EA+ +F  LG + C  +  +YN L   L  SG  
Sbjct: 383 ISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDK 442

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM-EENAVAPNVIIFVT 336
             AL +   +    +  D +TYN +I  LC DG +D+A +L +DM E     P VI + T
Sbjct: 443 IRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNT 502

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           ++ G  ++ +    IE+L  M  +  +P+ +  ++++
Sbjct: 503 VLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLI 539



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 169/307 (55%), Gaps = 1/307 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TYN +++G+CKEG +D+A     ++        V TYN L+  L +   W   ++
Sbjct: 248 RPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEK 307

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+ +G +P+ +T++ ++  LC++GK+DEA  +L +M ++ + P+ ++Y  L+   C
Sbjct: 308 LMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALC 367

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK++ A E    M S G   D +SYN ++   CKN   +EAL+++ ++   G  P   
Sbjct: 368 REGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAG 427

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +YNTLF  L+       AL +  EM  + +  D  TYN+ I  LC++G + +A+EL   +
Sbjct: 428 SYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDM 487

Query: 253 -GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
               KC+  + +YN ++ GLCK  R+  A+E+  ++     + +  TY ++I G+   G 
Sbjct: 488 FESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGW 547

Query: 312 MDKAHDL 318
              A +L
Sbjct: 548 RYDAMEL 554



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 177/353 (50%), Gaps = 1/353 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ +    +I G      ++KA  + +++  ++  PDV  YN++I G C A+  + A +
Sbjct: 109 KPDVILCTKLIKGFFNMKKIEKAIQV-MEILEKHGKPDVFAYNAVISGFCKADRVDHASK 167

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M  +G +P VVT+N+++   C  G++D A R++D +++ + +P   TY+ L++   
Sbjct: 168 VLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATI 227

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G I+ A +L   M S G + D  +YN+++NG CK   ++ A      +   G    V 
Sbjct: 228 TQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVS 287

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN L   L    + E+  KL  +M       +  TY+T I  LC++G I EA  + + +
Sbjct: 288 TYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVM 347

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D  +Y+ LI  LC+ G++++A+E    +     + D+++YN ++  LC +G  
Sbjct: 348 KEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNA 407

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           D+A ++F  + E    PN   + TL           + + ++ +M    + PD
Sbjct: 408 DEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPD 460



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 159/330 (48%), Gaps = 1/330 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP  +TY  +I+    +G +D+A  L  +M    + PD  TYN +++G+C     + A 
Sbjct: 212 CKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAF 271

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                +   G    V T+N+++ +L   GK +   +L+  M+ +   PN  TYSTL+   
Sbjct: 272 EFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITAL 331

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GKI+ A+ +   M+      D  SY+ LI+  C+  +V+ A+    +M+S G  P +
Sbjct: 332 CRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDI 391

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++YN++   L +    + AL +FE++       +  +YNT    L  +G  + A+ +   
Sbjct: 392 LSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILE 451

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL-PRRVLVADVVTYNIMIHGLCNDG 310
           +     + D   YN LI  LC+ G ++ A+EL   +         V++YN ++ GLC   
Sbjct: 452 MLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQ 511

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           ++  A ++   M      PN   +  LI G
Sbjct: 512 RIIDAIEVLAAMVNEGCLPNETTYTLLIQG 541



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 136/238 (57%), Gaps = 1/238 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN +TY+T+I  LC++G +D+AK +   MK + + PD  +Y+ LI  LC     + A 
Sbjct: 317 CEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAI 376

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
               +M+  G  P ++++N I+  LCKNG  DEA  + + + +    PNA +Y+TL    
Sbjct: 377 EFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGAL 436

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV-SKGIKPT 190
             +G   RA  +   M S G   D+++YN LI+  C++  V++A+ L  +M  S+  +PT
Sbjct: 437 WSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPT 496

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           V++YNT+ LGL ++ ++  A+++   M  +    + +TY   I G+   G+  +A+EL
Sbjct: 497 VISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMEL 554



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 139/288 (48%), Gaps = 1/288 (0%)

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           DQ        F   ++  CK+ K DE+   L  MV R  +P+    + L+ GF    KI 
Sbjct: 70  DQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIE 129

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
           +A ++   +E  G K D  +YN +I+G+CK   V+ A  +   M  +G +P VVTYN L 
Sbjct: 130 KAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILI 188

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
                  +++ AL++ +++ +D+      TY   I+     G I EA++L   +      
Sbjct: 189 GNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLR 248

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
            D   YN +++G+CK G L+ A E    + +   VA V TYNI++  L N+G+ +    L
Sbjct: 249 PDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKL 308

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
             DM      PN I + TLI    R  K  +   +L  MKEK + PD 
Sbjct: 309 MSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDG 356



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 115/243 (47%), Gaps = 8/243 (3%)

Query: 141 EELFGSMESMGCKHD------DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           ++ F   E+   KHD      D ++   +N  CK+ + +E+L   + MV++G KP V+  
Sbjct: 56  QQQFRVNETKPTKHDQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILC 115

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  G F + ++E A+++ E +++     D   YN  I G CK   +  A ++   +  
Sbjct: 116 TKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKK 174

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              E D+  YN LI   C  GRL++AL +   L +      V+TY I+I      G +D+
Sbjct: 175 RGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDE 234

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV- 373
           A  L  +M    + P+   +  +++G  +     +  E L ++ +   +   S  ++++ 
Sbjct: 235 AMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLR 294

Query: 374 DLL 376
           DLL
Sbjct: 295 DLL 297



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 3/152 (1%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE+G  C PN  +YNT+   L   G   +A  + L+M    I+PD +TYNSLI  LC   
Sbjct: 418 GEVG--CPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDG 475

Query: 66  DWNEAKRLFFEMMD-QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
             ++A  L  +M + +  QP+V+++N ++  LCK  ++ +A  +L  MV     PN  TY
Sbjct: 476 LVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTY 535

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           + L+ G    G    A EL   + +M    +D
Sbjct: 536 TLLIQGIGFAGWRYDAMELANLLVNMDAISED 567


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 178/340 (52%), Gaps = 4/340 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNEAK 71
           +P+ V+Y T+I+GLCK G VD A  LF +M       P+  TYN+L+ GLC  +  + A+
Sbjct: 43  QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAAR 102

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  E   +   P VVT+N +M  L + G++DEA      M +    P   +++ ++ G 
Sbjct: 103 AVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGL 162

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++  A E+F  M       + V+Y+++I+G CK+ +++EA  L   MVS+G +P +
Sbjct: 163 CRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDL 222

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V Y  L LG     +++ AL L   M       D  TY   ID LCK G + +A E+FR 
Sbjct: 223 VAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRE 282

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L   KC  ++  Y+ LI G C++ R++   ++ R +  R    +VVTYN MI GL    +
Sbjct: 283 LVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDR 339

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
            ++A+ +F +M E    P+   +  L      I+ P  V+
Sbjct: 340 NEEAYGMFREMSECGFVPDARTYRGLKRALRMIDHPPHVL 379



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 164/295 (55%), Gaps = 3/295 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN  TYN ++DGLCK+  +D A+A+  + +  +  PDVVTYN+L+  L      +EA 
Sbjct: 78  CRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEAL 137

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             F +M ++G  P++V+FN I+  LC+  ++ +A  + + M+ RD  PN  TYS ++DG 
Sbjct: 138 ATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGL 197

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C + +++ A++L   M S GC+ D V+Y  L+ G+     ++ AL L R MVS+G  P V
Sbjct: 198 CKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDV 257

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY  +   L ++ +V+ A ++F E+  +  + +  TY+  I G C+   + E  ++ R 
Sbjct: 258 VTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMRE 317

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +    C  ++  YN +I GL    R E A  +FR +     V D  TY  +   L
Sbjct: 318 MA---CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 369



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 184/354 (51%), Gaps = 5/354 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALF-LQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           N  T + I+ GLC+ G V +A   F   ++  +  PDVV+Y +LI+GLC     + A  L
Sbjct: 9   NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 68

Query: 74  FFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           F +M+  G  +P+  T+N ++D LCK  ++D A  ++    +RD  P+  TY+TLM    
Sbjct: 69  FRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALF 128

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ A   F  M   G     VS+N +I G C+ + + +AL ++ EM+ +   P +V
Sbjct: 129 QLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLV 188

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ +  GL +  Q++ A +L + M  +    D   Y   + G    G +  A+ L R +
Sbjct: 189 TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 248

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  D+  Y  +ID LCK GR++ A E+FR L       +VVTY+ +I G C   ++
Sbjct: 249 VSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRV 308

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           D+   +   M E A  PNV+ + T+I G   +++  +   +  +M E   +PDA
Sbjct: 309 DEGGKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDA 359



 Score =  160 bits (405), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 165/323 (51%), Gaps = 40/323 (12%)

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ-RDVRPNAFTYSTLMDGFCLTGKIN 138
           +G+Q +  T ++I+  LC+ G++ +A    D  ++    +P+  +Y+TL++G C  G+++
Sbjct: 4   EGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVD 63

Query: 139 RAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
            A +LF  M  + GC+ +  +YN L++G CK   ++ A ++  E   +   P VVTYNTL
Sbjct: 64  AAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTL 123

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
              LF++ +V+ AL  F +M  +       ++N  I GLC+   + +A+E+F  +     
Sbjct: 124 MAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF 183

Query: 258 ELDIQAYNCLIDGLCKS-----------------------------------GRLEIALE 282
             ++  Y+ +IDGLCKS                                   GRL+ AL 
Sbjct: 184 HPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALG 243

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           L R +  +  + DVVTY ++I  LC  G++D AH++F ++  N  +PNV+ +  LI G+ 
Sbjct: 244 LLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYC 303

Query: 343 RINKPSKVIELLHKMKEKKVMPD 365
           R    S+V E    M+E    P+
Sbjct: 304 R---ASRVDEGGKVMREMACRPN 323



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 137/259 (52%), Gaps = 2/259 (0%)

Query: 120 NAFTYSTLMDGFCLTGKINRAEELF-GSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           N  T S ++ G C  G++ +A E F  S+E    + D VSY  LING CK   V+ A  L
Sbjct: 9   NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 68

Query: 179 YREMVSKG-IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           +R+MV+ G  +P   TYN L  GL +  +++ A  +  E ++ D A D  TYNT +  L 
Sbjct: 69  FRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALF 128

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           + G + EA+  F  +        + ++N +I GLC++ RL  ALE+F  +  R    ++V
Sbjct: 129 QLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLV 188

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           TY+++I GLC   Q+D+A  L   M      P+++ +  L+ GF    +    + LL +M
Sbjct: 189 TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 248

Query: 358 KEKKVMPDASIVSMVVDLL 376
             +  +PD    ++V+D L
Sbjct: 249 VSQGCIPDVVTYTVVIDKL 267



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 27/52 (51%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGL 61
           + C+PN VTYNT+I GL      ++A  +F +M      PD  TY  L   L
Sbjct: 318 MACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 369


>gi|255660960|gb|ACU25649.1| pentatricopeptide repeat-containing protein [Verbena halei]
          Length = 376

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/339 (33%), Positives = 178/339 (52%), Gaps = 1/339 (0%)

Query: 27  CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           C+ G +D AK ++ ++    ++PD V YN++++G        +   L+ EMM      SV
Sbjct: 1   CESGDIDGAKRVYKKIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELW-EMMGSEGNRSV 59

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
            +FN++M  L  NGK+DE   + +LM +     ++ TY  L+ GFC  G I+++  +   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
            E  G   D  +Y+ +ING CK   ++ ALS+  +M+  G KP V  YNTL  GL    +
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNDMIKSGCKPNVHVYNTLINGLVGASK 179

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
            E A+++F EM     +    TYNT I+GLCKN    EA  L + L     +  +  Y+ 
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSM 239

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           L+ GLC   R+E AL+L+  +  +    DV  +NI+IHGLC+ G+M  A  L+ DM    
Sbjct: 240 LMKGLCLDHRVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNHWK 299

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            APN++   TL+ GF +       + +  ++    + PD
Sbjct: 300 CAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPD 338



 Score =  167 bits (423), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 179/352 (50%), Gaps = 5/352 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALF--LQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           P+ V YN +++G  +   V K K  F   +M G   N  V ++N ++ GL      +E  
Sbjct: 23  PDAVVYNAMLNGYFR---VAKIKDCFELWEMMGSEGNRSVSSFNIMMRGLFDNGKVDEVI 79

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            ++  M + G     +T+ +++   CKNG +D++  +L++  Q+    +AF YS +++G 
Sbjct: 80  SIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGL 139

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    ++RA  +   M   GCK +   YN LING     + E+A+ ++REM +    PT+
Sbjct: 140 CKEANLDRALSVLNDMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTI 199

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYNTL  GL +      A  L +E+    +     TY+  + GLC +  +  A++L+  
Sbjct: 200 ITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALQLWNQ 259

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D+Q +N LI GLC  G++++AL L+  +       ++V++N ++ G   DG 
Sbjct: 260 VTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNHWKCAPNLVSHNTLMEGFYKDGD 319

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           +  A  ++  +  N + P++I +   + G    N+ S  I  LH    KK++
Sbjct: 320 IRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIV 371



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 144/284 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +++TY  ++ G CK G++DK+  +    + +    D   Y+++I+GLC   + + A  + 
Sbjct: 93  DSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVL 152

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M+  G +P+V  +N +++ L    K ++A R+   M      P   TY+TL++G C  
Sbjct: 153 NDMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKN 212

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
                A  L   +   G     ++Y++L+ G C +  VE AL L+ ++ SKG KP V  +
Sbjct: 213 EMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALQLWNQVTSKGFKPDVQMH 272

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L  GL  + +++ AL L+ +M     A +  ++NT ++G  K+G I  A+ ++  +  
Sbjct: 273 NILIHGLCSVGKMQLALSLYFDMNHWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILR 332

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
              E DI +YN  + GLC   R+  A+        + +V   +T
Sbjct: 333 NGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 117/200 (58%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN   YNT+I+GL      + A  +F +M   + +P ++TYN+LI+GLC    + EA 
Sbjct: 160 CKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAY 219

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  E++D+G+ P V+T++++M  LC + +++ A +L + +  +  +P+   ++ L+ G 
Sbjct: 220 NLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALQLWNQVTSKGFKPDVQMHNILIHGL 279

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+  A  L+  M    C  + VS+N L+ G+ K+ ++  AL ++  ++  G++P +
Sbjct: 280 CSVGKMQLALSLYFDMNHWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDI 339

Query: 192 VTYNTLFLGLFEIHQVEHAL 211
           ++YN    GL   +++  A+
Sbjct: 340 ISYNITLKGLCSCNRISDAI 359



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 143/277 (51%), Gaps = 1/277 (0%)

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           C++G +D A R+   +V+  V P+A  Y+ +++G+    KI    EL+  M S G +   
Sbjct: 1   CESGDIDGAKRVYKKIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            S+NI++ G   N +V+E +S++  M   G     +TY  L  G  +   ++ +L + E 
Sbjct: 61  -SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
            ++     D   Y+  I+GLCK   +  A+ +   +    C+ ++  YN LI+GL  + +
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNDMIKSGCKPNVHVYNTLINGLVGASK 179

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
            E A+ +FR +        ++TYN +I+GLC +    +A++L  ++ +  + P VI +  
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSM 239

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           L+ G    ++  + ++L +++  K   PD  + ++++
Sbjct: 240 LMKGLCLDHRVERALQLWNQVTSKGFKPDVQMHNILI 276



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 101/188 (53%), Gaps = 1/188 (0%)

Query: 7   EIGVV-CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           E+G + C P  +TYNT+I+GLCK     +A  L  ++  + ++P V+TY+ L+ GLC  +
Sbjct: 189 EMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDH 248

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
               A +L+ ++  +G +P V   N+++  LC  GKM  A  L   M      PN  +++
Sbjct: 249 RVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNHWKCAPNLVSHN 308

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TLM+GF   G I  A  ++  +   G + D +SYNI + G C    + +A+    + V+K
Sbjct: 309 TLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTK 368

Query: 186 GIKPTVVT 193
            I  T +T
Sbjct: 369 KIVLTKIT 376



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/174 (18%), Positives = 86/174 (49%), Gaps = 1/174 (0%)

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ 262
           E   ++ A ++++++    V+ D   YN  ++G  +   I +  EL+  +G  +    + 
Sbjct: 2   ESGDIDGAKRVYKKIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGS-EGNRSVS 60

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
           ++N ++ GL  +G+++  + ++  +     V D +TY I++HG C +G +DK+  +    
Sbjct: 61  SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           E+     +   +  +I+G  +     + + +L+ M +    P+  + + +++ L
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNDMIKSGCKPNVHVYNTLINGL 174


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 199/371 (53%), Gaps = 9/371 (2%)

Query: 10  VVCK---PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           VVCK   P+   + T I+  CK G V++A  LF +M+   + P+VVTYN++I GL  +  
Sbjct: 243 VVCKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGR 302

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           ++EA     +M+++GV+P+++T+++++  L K  ++ +A  +L  M ++   PN   Y+ 
Sbjct: 303 YDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNN 362

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+D     G +N+A E+   M S G      +YN LI GYCK+ + + A  L +EM+S G
Sbjct: 363 LIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIG 422

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
                 ++ ++   L   H  + AL+   EM   +++       T I GLCK+G   +AV
Sbjct: 423 FNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAV 482

Query: 247 EL---FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           EL   F   G L   +D +  N L+ GLC++G+LE    + + +  R  V D V+YN +I
Sbjct: 483 ELWLKFLNKGFL---VDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLI 539

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
            G C + ++D+A     +M +  + P+   +  LI G + +NK  + I+     K   ++
Sbjct: 540 SGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMI 599

Query: 364 PDASIVSMVVD 374
           PD    S+++D
Sbjct: 600 PDVYTYSVMID 610



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 183/359 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
            + TYNT+I G CK G  D A+ L  +M     N +  ++ S+I  LC  + ++ A R  
Sbjct: 391 TSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFV 450

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ + + P       ++  LCK+GK  +A  L    + +    +  T + L+ G C  
Sbjct: 451 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEA 510

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK+     +   +   G   D VSYN LI+G C NK+++EA     EMV KG+KP   TY
Sbjct: 511 GKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTY 570

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + L  GL  +++VE A++ + + +R+ +  D  TY+  IDG CK     E  +LF  +  
Sbjct: 571 SILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMS 630

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + +   YN LI   C+SGRL +ALEL   +  + +  +  TY  +I G+    ++++
Sbjct: 631 NNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 690

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A  L  +M    + PNV  +  LI G+ ++ +  KV  LL +M  K V P+    ++++
Sbjct: 691 AKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 749



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 172/330 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P      T+I GLCK G   KA  L+L+   +    D  T N+L+HGLC A    E  R+
Sbjct: 460 PGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRI 519

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             E++ +G     V++N ++   C N K+DEA   +D MV++ ++P+ +TYS L+ G   
Sbjct: 520 QKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLN 579

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+  A + +G  +  G   D  +Y+++I+G CK +  EE   L+ EM+S  ++P  V 
Sbjct: 580 MNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVV 639

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L        ++  AL+L E+M+   ++ +++TY + I G+     + EA  L   + 
Sbjct: 640 YNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMR 699

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   E ++  Y  LIDG  K G++     L R +  + +  + +TY +MI G   DG + 
Sbjct: 700 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 759

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           +A  L  +M E  + P+ I +   I+G+++
Sbjct: 760 EASRLLHEMREKGIVPDSITYKEFIYGYLK 789



 Score =  167 bits (423), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 185/364 (50%), Gaps = 6/364 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN + YN +ID L + G ++KA  +   M  + ++    TYN+LI G C +   + A+RL
Sbjct: 355 PNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERL 414

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+  G   +  +F  ++  LC +   D A R +  M+ R++ P     +TL+ G C 
Sbjct: 415 LKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 474

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK ++A EL+    + G   D  + N L++G C+  ++EE   + +E++ +G     V+
Sbjct: 475 HGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVS 534

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF---R 250
           YNTL  G     +++ A    +EM +  +  D  TY+  I GL     + EA++ +   +
Sbjct: 535 YNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCK 594

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             G++    D+  Y+ +IDG CK+ R E   +LF  +    L  + V YN +I   C  G
Sbjct: 595 RNGMIP---DVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSG 651

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++  A +L  DM+   ++PN   + +LI G   I++  +   LL +M+ + + P+    +
Sbjct: 652 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYT 711

Query: 371 MVVD 374
            ++D
Sbjct: 712 ALID 715



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 169/352 (48%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  ++ ++I  LC     D A     +M   N++P      +LI GLC     ++A  L+
Sbjct: 426 NQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELW 485

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            + +++G      T N ++  LC+ GK++E  R+   ++ R    +  +Y+TL+ G C  
Sbjct: 486 LKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGN 545

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            K++ A      M   G K D+ +Y+ILI G     +VEEA+  + +    G+ P V TY
Sbjct: 546 KKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTY 605

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + +  G  +  + E   KLF+EM  +++  +T  YN  I   C++G +  A+EL   +  
Sbjct: 606 SVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKH 665

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                +   Y  LI G+    R+E A  L   +    L  +V  Y  +I G    GQM K
Sbjct: 666 KGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 725

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              L  +M    V PN I +  +I G+ R    ++   LLH+M+EK ++PD+
Sbjct: 726 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDS 777



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 122/235 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY+ +I GL     V++A   +   K   + PDV TY+ +I G C A    E ++
Sbjct: 564 KPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQK 623

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EMM   +QP+ V +N ++   C++G++  A  L + M  + + PN+ TY++L+ G  
Sbjct: 624 LFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 683

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  ++  A+ L   M   G + +   Y  LI+GY K  ++ +   L REM SK + P  +
Sbjct: 684 IISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 743

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           TY  +  G      V  A +L  EM+   +  D+ TY  FI G  K G +++A +
Sbjct: 744 TYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFK 798



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 3/220 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY+ +IDG CK    ++ + LF +M   N+ P+ V YN LI   C +   + A  L
Sbjct: 600 PDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALEL 659

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M  +G+ P+  T+  ++  +    +++EA  LL+ M    + PN F Y+ L+DG+  
Sbjct: 660 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGK 719

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++ + E L   M S     + ++Y ++I GY ++  V EA  L  EM  KGI P  +T
Sbjct: 720 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSIT 779

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
           Y     G  +   V  A K  +E   ++ AA    +N  I
Sbjct: 780 YKEFIYGYLKQGGVLQAFKGSDE---ENYAAIIEGWNKLI 816



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 5/169 (2%)

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL--GILKCELDIQAYNCL 267
           AL +F  +    +    +T N  +  L +     +  E F  +  G+     D+  +   
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCKGV---SPDVYLFTTA 258

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           I+  CK G++E A+ELF  +    +V +VVTYN +I GL   G+ D+A      M E  V
Sbjct: 259 INAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGV 318

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            P +I +  L+ G  +  +      +L +M EK   P+  + + ++D L
Sbjct: 319 EPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSL 367


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 189/374 (50%), Gaps = 13/374 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY  +I GLCK      A  LF +M    I P+ + Y+ ++ GLC A    +A+RL
Sbjct: 196 PDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRL 255

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M   G    ++T+NV+++  CK+G +D+A  LL L+ +         Y  L++G   
Sbjct: 256 FSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFR 315

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +   A   +  M     K D + Y I+I G  +   V EAL+L  EM  +G++P  + 
Sbjct: 316 ARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTIC 375

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  ++  ++ A  L  E+ + D   +  TY+  I G+CKNG I +A  +F+ + 
Sbjct: 376 YNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEME 435

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL-----PRRVL--------VADVVTYN 300
            L C   +  +N LI+GLCK+ RLE A  LF  +     P   L        V D+ +  
Sbjct: 436 KLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQ 495

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +M+  LC  G + KA+ L + + ++ V P++  +  LI+GF +    +   +L  +M+ K
Sbjct: 496 VMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLK 555

Query: 361 KVMPDASIVSMVVD 374
             MPD+     ++D
Sbjct: 556 GHMPDSVTYGTLID 569



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 180/346 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K ++  ++ +I+   + G  +KA   F  M+  +  PD+  +N ++H L     +  A  
Sbjct: 125 KISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALA 184

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++ +M+   + P VVT+ +++  LCK  K  +A  L D M  R + PN   YS ++ G C
Sbjct: 185 VYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLC 244

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              KI  A+ LF  M + GC  D ++YN+L+NG+CK+  +++A +L + +   G    V+
Sbjct: 245 QAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVI 304

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y  L  GLF   + E A   +++M R+++  D   Y   I GL + G + EA+ L   +
Sbjct: 305 GYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEM 364

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D   YN LI G C  G L+ A  L   + +     +  TY+I+I G+C +G +
Sbjct: 365 TERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLI 424

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           +KA  +F +ME+    P+V+ F +LI+G  + N+  +   L ++M+
Sbjct: 425 NKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQME 470



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 180/375 (48%), Gaps = 57/375 (15%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TY+ +I G+CK G ++KA+ +F +M+     P VVT+NSLI+GLC AN   EA+
Sbjct: 404 CFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEAR 463

Query: 72  RLFFEM-----------MDQGVQP--SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR 118
            LF++M           + QG      + +  V+M+ LC++G + +A +LL  +V   V 
Sbjct: 464 LLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVL 523

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           P+  TY+ L++GFC  G IN A +LF  M+  G   D V+Y  LI+G  +    E+AL +
Sbjct: 524 PDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEI 583

Query: 179 YREMVSKGIKPTVVTYNTL-----------------------FLGL-----------FEI 204
           + +MV KG  P   TY T+                       F G            F+ 
Sbjct: 584 FEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDN 643

Query: 205 HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAY 264
            +++ A++   EM       D + Y  F+ GL +     EA  +F  L   K  ++I + 
Sbjct: 644 EELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFK--MNISSA 701

Query: 265 NC--LIDGLCKSGRLEIALELFR-SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD-LFL 320
           +C  LI  LC    L++A+++F  +L R   +   +   +    LCN   +D+  D LFL
Sbjct: 702 SCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPICNQL----LCNLLHLDRKDDALFL 757

Query: 321 DMEENAVAPNVIIFV 335
                A    + IF+
Sbjct: 758 ANRMEASGTELCIFI 772



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 142/277 (51%)

Query: 90  NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
           ++I+ +L K    +   ++L  +    ++ ++  +S L++ +   G   +A E F  M  
Sbjct: 97  DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRD 156

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
             CK D  ++N++++   + +    AL++Y +M+   + P VVTY  L  GL +  + + 
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQD 216

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           AL LF+EM    +  +   Y+  + GLC+   I +A  LF  +    C  D+  YN L++
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           G CKSG L+ A  L + L +   +  V+ Y  +I+GL    + ++AH  +  M    + P
Sbjct: 277 GFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKP 336

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +V+++  +I G  +  + ++ + LL +M E+ + PD 
Sbjct: 337 DVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDT 373



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 156/339 (46%), Gaps = 3/339 (0%)

Query: 22  IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG 81
           II  L KE   +    +  ++K   I      ++ LI     A    +A   F  M D  
Sbjct: 99  IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFD 158

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
            +P +  FN+I+  L +      A  + + M++ ++ P+  TY  L+ G C T K   A 
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDAL 218

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
            LF  M   G   + + Y+I+++G C+ K++ +A  L+ +M + G    ++TYN L  G 
Sbjct: 219 VLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGF 278

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
            +   ++ A  L + + +D        Y   I+GL +     EA   ++ +     + D+
Sbjct: 279 CKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDV 338

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
             Y  +I GL + GR+  AL L   +  R L  D + YN +I G C+ G +D+A  L L+
Sbjct: 339 MLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLE 398

Query: 322 MEENAVAPNVIIFVTLIHGFVR---INKPSKVIELLHKM 357
           + ++   PN   +  LI G  +   INK   + + + K+
Sbjct: 399 ISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKL 437



 Score = 44.7 bits (104), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 27/113 (23%), Positives = 57/113 (50%)

Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
           +A++ LI+   ++G  E A+E F  +       D+  +N+++H L        A  ++  
Sbjct: 129 EAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQ 188

Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           M +  + P+V+ +  LIHG  +  K    + L  +M ++ ++P+  I S+V+ 
Sbjct: 189 MLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLS 241


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 199/399 (49%), Gaps = 38/399 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   YN++I GL K   +D+A++  ++M    + P+  TY + I G   A+++  A + 
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM + GV P+ V    +++E CK GK+ EA      MV + +  +A TY+ LM+G   
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K++ AEE+F  M   G   D  SY +LING+ K   +++A S++ EMV +G+ P V+ 
Sbjct: 605 NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 664

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G     ++E A +L +EM    +  +  TY T IDG CK+G + EA  LF  + 
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELF---------RSLPRRVLVADV-------- 296
           +     D   Y  L+DG C+   +E A+ +F          + P   L+  V        
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784

Query: 297 ---------------------VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
                                VTYNIMI  LC +G ++ A +LF  M+   + P VI + 
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +L++G+ ++ + +++  +  +     + PD  + S++++
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 183/390 (46%), Gaps = 35/390 (8%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           +G I     P    Y ++I+G C+E  V +   L ++MK  NI     TY +++ G+C +
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430

Query: 65  ND-----------------------------------WNEAKRLFFEMMDQGVQPSVVTF 89
            D                                   + +A R+  EM +QG+ P +  +
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCY 490

Query: 90  NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
           N ++  L K  +MDEA   L  MV+  ++PNAFTY   + G+    +   A++    M  
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
            G   + V    LIN YCK  +V EA S YR MV +GI     TY  L  GLF+  +V+ 
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           A ++F EM+   +A D  +Y   I+G  K G + +A  +F  +       ++  YN L+ 
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           G C+SG +E A EL   +  + L  + VTY  +I G C  G + +A  LF +M+   + P
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           +  ++ TL+ G  R+N   + I +    K+
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIFGTNKK 760



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 192/371 (51%), Gaps = 11/371 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E GV+  PN V    +I+  CK+G V +A + +  M  + I  D  TY  L++GL   + 
Sbjct: 550 ECGVL--PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            ++A+ +F EM  +G+ P V ++ V+++   K G M +AS + D MV+  + PN   Y+ 
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ GFC +G+I +A+EL   M   G   + V+Y  +I+GYCK+ ++ EA  L+ EM  KG
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P    Y TL  G   ++ VE A+ +F    +   A+ T+ +N  I+ + K G      
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKT 786

Query: 247 ELFRTLGILKCELDI------QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
           E+   L  +    D         YN +ID LCK G LE A ELF  +    L+  V+TY 
Sbjct: 787 EVLNRL--MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +++G    G+  +   +F +     + P+ I++  +I+ F++    +K + L+ +M  K
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904

Query: 361 KVMPDASIVSM 371
             + D   +S+
Sbjct: 905 NAVDDGCKLSI 915



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 174/375 (46%), Gaps = 36/375 (9%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY T++ G+C  G +D A  +  +M      P+VV Y +LI      + + +A R+  EM
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF------ 131
            +QG+ P +  +N ++  L K  +MDEA   L  MV+  ++PNAFTY   + G+      
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538

Query: 132 -----------------------------CLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
                                        C  GK+  A   + SM   G   D  +Y +L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           +NG  KN +V++A  ++REM  KGI P V +Y  L  G  ++  ++ A  +F+EM  + +
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
             +   YN  + G C++G I +A EL   + +     +   Y  +IDG CKSG L  A  
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           LF  +  + LV D   Y  ++ G C    +++A  +F    +   A +   F  LI+   
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVF 777

Query: 343 RINKPSKVIELLHKM 357
           +  K     E+L+++
Sbjct: 778 KFGKTELKTEVLNRL 792



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 197/406 (48%), Gaps = 46/406 (11%)

Query: 10  VVCK---PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           ++CK   P   TY+ +IDGLCK   ++ AK+L ++M    ++ D  TY+ LI GL    +
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            + AK L  EM+  G+      ++  +  + K G M++A  L D M+   + P A  Y++
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L++G+C    + +  EL   M+         +Y  ++ G C + +++ A ++ +EM++ G
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK-------- 238
            +P VV Y TL     +  +   A+++ +EM+   +A D   YN+ I GL K        
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507

Query: 239 ----------------------NGYIVEAVEL---------FRTLGILKCELDIQAYNCL 267
                                 +GYI EA E           R  G+L  ++       L
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYI-EASEFASADKYVKEMRECGVLPNKVLCTG---L 563

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           I+  CK G++  A   +RS+  + ++ D  TY ++++GL  + ++D A ++F +M    +
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           AP+V  +  LI+GF ++    K   +  +M E+ + P+  I +M++
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 183/361 (50%), Gaps = 10/361 (2%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY  +++GL K   VD A+ +F +M+G+ I PDV +Y  LI+G     +  +A  +F EM
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +++G+ P+V+ +N+++   C++G++++A  LLD M  + + PNA TY T++DG+C +G +
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A  LF  M+  G   D   Y  L++G C+  +VE A++++     KG   +   +N L
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNAL 772

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDV----AADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
              +F+  + E   ++   +           +  TYN  ID LCK G +  A ELF  + 
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  +  Y  L++G  K GR      +F       +  D + Y+++I+    +G   
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892

Query: 314 KAHDLFLDM-EENAVAPNVIIFVT----LIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           KA  L   M  +NAV     + ++    L+ GF ++ +     +++  M   + +PD++ 
Sbjct: 893 KALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952

Query: 369 V 369
           V
Sbjct: 953 V 953



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 160/338 (47%), Gaps = 45/338 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +Y  +I+G  K G + KA ++F +M  E + P+V+ YN L+ G C + +  +AK L
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G+ P+ VT+  I+D  CK+G + EA RL D M  + + P++F Y+TL+DG C 
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744

Query: 134 TGKINRAEELFGSMESMGC---------------------------------------KH 154
              + RA  +FG+ +  GC                                       K 
Sbjct: 745 LNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           +DV+YNI+I+  CK   +E A  L+ +M +  + PTV+TY +L  G  ++ +      +F
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK-----CELDIQAYNCLID 269
           +E     +  D   Y+  I+   K G   +A+ L   +         C+L I     L+ 
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLS 923

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           G  K G +E+A ++  ++ R   + D  T   +I+  C
Sbjct: 924 GFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/391 (23%), Positives = 175/391 (44%), Gaps = 21/391 (5%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           +  +G+   P       ++D L +   +D    ++  M   N+  DV TY+ LI   C A
Sbjct: 175 SSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRA 234

Query: 65  NDWNEAKRLFFE---------------------MMDQGVQPSVVTFNVIMDELCKNGKMD 103
            +    K + F+                     M+ +G+ P   T++V++D LCK  +++
Sbjct: 235 GNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLE 294

Query: 104 EASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILI 163
           +A  LL  M    V  +  TYS L+DG       + A+ L   M S G       Y+  I
Sbjct: 295 DAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCI 354

Query: 164 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVA 223
               K   +E+A +L+  M++ G+ P    Y +L  G      V    +L  EM++ ++ 
Sbjct: 355 CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIV 414

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL 283
               TY T + G+C +G +  A  + + +    C  ++  Y  LI    ++ R   A+ +
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRV 474

Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            + +  + +  D+  YN +I GL    +MD+A    ++M EN + PN   +   I G++ 
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534

Query: 344 INKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            ++ +   + + +M+E  V+P+  + + +++
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLIN 565



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 167/373 (44%), Gaps = 36/373 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    +++I+   C + FV K+              D V +  L  G        EA  +
Sbjct: 129 PVAEVWSSIVR--CSQEFVGKSD-------------DGVLFGILFDGYIAKGYIEEAVFV 173

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F   M   + P +    V++D L +  ++D    +   MV+R+V  +  TY  L+   C 
Sbjct: 174 FSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCR 233

Query: 134 TGKINRAEELF---------------GSM---ESMGCK---HDDVSYNILINGYCKNKEV 172
            G +   +++                G++   ESM CK       +Y++LI+G CK K +
Sbjct: 234 AGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRL 293

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           E+A SL  EM S G+     TY+ L  GL +    + A  L  EM    +      Y+  
Sbjct: 294 EDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCC 353

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           I  + K G + +A  LF  +         QAY  LI+G C+   +    EL   + +R +
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
           V    TY  ++ G+C+ G +D A+++  +M  +   PNV+I+ TLI  F++ ++    + 
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMR 473

Query: 353 LLHKMKEKKVMPD 365
           +L +MKE+ + PD
Sbjct: 474 VLKEMKEQGIAPD 486



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 89/168 (52%), Gaps = 7/168 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTYN +ID LCKEG ++ AK LF QM+  N+ P V+TY SL++G        E   
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV-----RPNAFTYSTL 127
           +F E +  G++P  + ++VI++   K G   +A  L+D M  ++      + +  T   L
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC--KNKEVE 173
           + GF   G++  AE++  +M  +    D  +   LIN  C   N+ VE
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVE 969



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 154/387 (39%), Gaps = 82/387 (21%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRL--FFEMMDQG--VQPSVVTFNVIMDELCKNGKM 102
           INP+VV        +  +   ++  +L  FF  +D     +  + +F+ +  +LC  G  
Sbjct: 60  INPEVVL------SVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSF 113

Query: 103 DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
           ++A  +++ M++R+  P A  +S+++   C             S E +G   D V + IL
Sbjct: 114 EKALSVVERMIERN-WPVAEVWSSIVR--C-------------SQEFVGKSDDGVLFGIL 157

Query: 163 INGYCKNKEVEEAL-----------------------------------SLYREMVSKGI 187
            +GY     +EEA+                                    +Y+ MV + +
Sbjct: 158 FDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNV 217

Query: 188 KPTVVTYNTLFLG-------------LFEIHQ--------VEHALKLFEEMQRDDVAADT 226
              V TY+ L +              LF+  +        V+ ALKL E M    +    
Sbjct: 218 VFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLK 277

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            TY+  IDGLCK   + +A  L   +  L   LD   Y+ LIDGL K    + A  L   
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +    +      Y+  I  +  +G M+KA  LF  M  + + P    + +LI G+ R   
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVV 373
             +  ELL +MK++ ++        VV
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVV 424



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 21/173 (12%)

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           D   +    DG    GYI EAV +F +   L+    +     L+D L +  RL++  +++
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE-------------------- 324
           + +  R +V DV TY+++I   C  G +    D+    E+                    
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMI 269

Query: 325 -NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              + P    +  LI G  +I +      LL +M    V  D    S+++D L
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL 322


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 199/399 (49%), Gaps = 38/399 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   YN++I GL K   +D+A++  ++M    + P+  TY + I G   A+++  A + 
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM + GV P+ V    +++E CK GK+ EA      MV + +  +A TY+ LM+G   
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K++ AEE+F  M   G   D  SY +LING+ K   +++A S++ EMV +G+ P V+ 
Sbjct: 605 NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 664

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G     ++E A +L +EM    +  +  TY T IDG CK+G + EA  LF  + 
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELF---------RSLPRRVLVADV-------- 296
           +     D   Y  L+DG C+   +E A+ +F          + P   L+  V        
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784

Query: 297 ---------------------VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
                                VTYNIMI  LC +G ++ A +LF  M+   + P VI + 
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +L++G+ ++ + +++  +  +     + PD  + S++++
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 180/381 (47%), Gaps = 35/381 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND------- 66
           P    Y ++I+G C+E  V +   L ++MK  NI     TY +++ G+C + D       
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439

Query: 67  ----------------------------WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                                       + +A R+  EM +QG+ P +  +N ++  L K
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
             +MDEA   L  MV+  ++PNAFTY   + G+    +   A++    M   G   + V 
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
              LIN YCK  +V EA S YR MV +GI     TY  L  GLF+  +V+ A ++F EM+
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +A D  +Y   I+G  K G + +A  +F  +       ++  YN L+ G C+SG +E
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A EL   +  + L  + VTY  +I G C  G + +A  LF +M+   + P+  ++ TL+
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739

Query: 339 HGFVRINKPSKVIELLHKMKE 359
            G  R+N   + I +    K+
Sbjct: 740 DGCCRLNDVERAITIFGTNKK 760



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 192/371 (51%), Gaps = 11/371 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E GV+  PN V    +I+  CK+G V +A + +  M  + I  D  TY  L++GL   + 
Sbjct: 550 ECGVL--PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            ++A+ +F EM  +G+ P V ++ V+++   K G M +AS + D MV+  + PN   Y+ 
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ GFC +G+I +A+EL   M   G   + V+Y  +I+GYCK+ ++ EA  L+ EM  KG
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P    Y TL  G   ++ VE A+ +F    +   A+ T+ +N  I+ + K G      
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKT 786

Query: 247 ELFRTLGILKCELDI------QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
           E+   L  +    D         YN +ID LCK G LE A ELF  +    L+  V+TY 
Sbjct: 787 EVLNRL--MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +++G    G+  +   +F +     + P+ I++  +I+ F++    +K + L+ +M  K
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904

Query: 361 KVMPDASIVSM 371
             + D   +S+
Sbjct: 905 NAVDDGCKLSI 915



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 174/375 (46%), Gaps = 36/375 (9%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY T++ G+C  G +D A  +  +M      P+VV Y +LI      + + +A R+  EM
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF------ 131
            +QG+ P +  +N ++  L K  +MDEA   L  MV+  ++PNAFTY   + G+      
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538

Query: 132 -----------------------------CLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
                                        C  GK+  A   + SM   G   D  +Y +L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           +NG  KN +V++A  ++REM  KGI P V +Y  L  G  ++  ++ A  +F+EM  + +
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
             +   YN  + G C++G I +A EL   + +     +   Y  +IDG CKSG L  A  
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           LF  +  + LV D   Y  ++ G C    +++A  +F    +   A +   F  LI+   
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVF 777

Query: 343 RINKPSKVIELLHKM 357
           +  K     E+L+++
Sbjct: 778 KFGKTELKTEVLNRL 792



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 197/406 (48%), Gaps = 46/406 (11%)

Query: 10  VVCK---PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           ++CK   P   TY+ +IDGLCK   ++ AK+L ++M    ++ D  TY+ LI GL    +
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            + AK L  EM+  G+      ++  +  + K G M++A  L D M+   + P A  Y++
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L++G+C    + +  EL   M+         +Y  ++ G C + +++ A ++ +EM++ G
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK-------- 238
            +P VV Y TL     +  +   A+++ +EM+   +A D   YN+ I GL K        
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507

Query: 239 ----------------------NGYIVEAVEL---------FRTLGILKCELDIQAYNCL 267
                                 +GYI EA E           R  G+L  ++       L
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYI-EASEFASADKYVKEMRECGVLPNKVLCTG---L 563

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           I+  CK G++  A   +RS+  + ++ D  TY ++++GL  + ++D A ++F +M    +
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           AP+V  +  LI+GF ++    K   +  +M E+ + P+  I +M++
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 183/361 (50%), Gaps = 10/361 (2%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY  +++GL K   VD A+ +F +M+G+ I PDV +Y  LI+G     +  +A  +F EM
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +++G+ P+V+ +N+++   C++G++++A  LLD M  + + PNA TY T++DG+C +G +
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A  LF  M+  G   D   Y  L++G C+  +VE A++++     KG   +   +N L
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNAL 772

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDV----AADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
              +F+  + E   ++   +           +  TYN  ID LCK G +  A ELF  + 
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  +  Y  L++G  K GR      +F       +  D + Y+++I+    +G   
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892

Query: 314 KAHDLFLDM-EENAVAPNVIIFVT----LIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           KA  L   M  +NAV     + ++    L+ GF ++ +     +++  M   + +PD++ 
Sbjct: 893 KALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952

Query: 369 V 369
           V
Sbjct: 953 V 953



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 160/338 (47%), Gaps = 45/338 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +Y  +I+G  K G + KA ++F +M  E + P+V+ YN L+ G C + +  +AK L
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G+ P+ VT+  I+D  CK+G + EA RL D M  + + P++F Y+TL+DG C 
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744

Query: 134 TGKINRAEELFGSMESMGC---------------------------------------KH 154
              + RA  +FG+ +  GC                                       K 
Sbjct: 745 LNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           +DV+YNI+I+  CK   +E A  L+ +M +  + PTV+TY +L  G  ++ +      +F
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK-----CELDIQAYNCLID 269
           +E     +  D   Y+  I+   K G   +A+ L   +         C+L I     L+ 
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLS 923

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           G  K G +E+A ++  ++ R   + D  T   +I+  C
Sbjct: 924 GFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/391 (23%), Positives = 175/391 (44%), Gaps = 21/391 (5%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           +  +G+   P       ++D L +   +D    ++  M   N+  DV TY+ LI   C A
Sbjct: 175 SSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRA 234

Query: 65  NDWNEAKRLFFE---------------------MMDQGVQPSVVTFNVIMDELCKNGKMD 103
            +    K + F+                     M+ +G+ P   T++V++D LCK  +++
Sbjct: 235 GNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLE 294

Query: 104 EASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILI 163
           +A  LL  M    V  +  TYS L+DG       + A+ L   M S G       Y+  I
Sbjct: 295 DAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCI 354

Query: 164 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVA 223
               K   +E+A +L+  M++ G+ P    Y +L  G      V    +L  EM++ ++ 
Sbjct: 355 CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIV 414

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL 283
               TY T + G+C +G +  A  + + +    C  ++  Y  LI    ++ R   A+ +
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRV 474

Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            + +  + +  D+  YN +I GL    +MD+A    ++M EN + PN   +   I G++ 
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534

Query: 344 INKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            ++ +   + + +M+E  V+P+  + + +++
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLIN 565



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 167/373 (44%), Gaps = 36/373 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    +++I+   C + FV K+              D V +  L  G        EA  +
Sbjct: 129 PVAEVWSSIVR--CSQEFVGKSD-------------DGVLFGILFDGYIAKEYIEEAVFV 173

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F   M   + P +    V++D L +  ++D    +   MV+R+V  +  TY  L+   C 
Sbjct: 174 FSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCR 233

Query: 134 TGKINRAEELF---------------GSM---ESMGCK---HDDVSYNILINGYCKNKEV 172
            G +   +++                G++   ESM CK       +Y++LI+G CK K +
Sbjct: 234 AGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRL 293

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           E+A SL  EM S G+     TY+ L  GL +    + A  L  EM    +      Y+  
Sbjct: 294 EDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCC 353

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           I  + K G + +A  LF  +         QAY  LI+G C+   +    EL   + +R +
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
           V    TY  ++ G+C+ G +D A+++  +M  +   PNV+I+ TLI  F++ ++    + 
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMR 473

Query: 353 LLHKMKEKKVMPD 365
           +L +MKE+ + PD
Sbjct: 474 VLKEMKEQGIAPD 486



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 89/168 (52%), Gaps = 7/168 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTYN +ID LCKEG ++ AK LF QM+  N+ P V+TY SL++G        E   
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV-----RPNAFTYSTL 127
           +F E +  G++P  + ++VI++   K G   +A  L+D M  ++      + +  T   L
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC--KNKEVE 173
           + GF   G++  AE++  +M  +    D  +   LIN  C   N+ VE
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVE 969



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 155/387 (40%), Gaps = 82/387 (21%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRL--FFEMMDQG--VQPSVVTFNVIMDELCKNGKM 102
           INP+VV        +  +   ++  +L  FF  +D     +  + +F+ +  +LC  G  
Sbjct: 60  INPEVVL------SVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSF 113

Query: 103 DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
           ++A  +++ M++R+  P A  +S+++   C             S E +G   D V + IL
Sbjct: 114 EKALSVVERMIERN-WPVAEVWSSIVR--C-------------SQEFVGKSDDGVLFGIL 157

Query: 163 INGYCKNKEVEEAL-----------------------------------SLYREMVSKGI 187
            +GY   + +EEA+                                    +Y+ MV + +
Sbjct: 158 FDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNV 217

Query: 188 KPTVVTYNTLFLG-------------LFEIHQ--------VEHALKLFEEMQRDDVAADT 226
              V TY+ L +              LF+  +        V+ ALKL E M    +    
Sbjct: 218 VFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLK 277

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            TY+  IDGLCK   + +A  L   +  L   LD   Y+ LIDGL K    + A  L   
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +    +      Y+  I  +  +G M+KA  LF  M  + + P    + +LI G+ R   
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVV 373
             +  ELL +MK++ ++        VV
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVV 424



 Score = 44.7 bits (104), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 21/173 (12%)

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           D   +    DG     YI EAV +F +   L+    +     L+D L +  RL++  +++
Sbjct: 150 DGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE-------------------- 324
           + +  R +V DV TY+++I   C  G +    D+    E+                    
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMI 269

Query: 325 -NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              + P    +  LI G  +I +      LL +M    V  D    S+++D L
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL 322


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 185/357 (51%), Gaps = 5/357 (1%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++N +I+G CK+G  D A  +  +M    I P   TYN  I  LC     ++A+ L   M
Sbjct: 347 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 406

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
                 P VV++N +M    K GK  EAS L D +   D+ P+  TY+TL+DG C +G +
Sbjct: 407 ----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 462

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A+ L   M +     D ++Y  L+ G+ KN  +  A  +Y EM+ KGIKP    Y T 
Sbjct: 463 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTR 522

Query: 198 FLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
            +G   +   + A +L EEM   D  A D + YN  IDGLCK G +V+A+E  R +  + 
Sbjct: 523 AVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVG 582

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              D   Y  +I G  ++G+ ++A  L+  + R+ L   V+TY ++I+G    G++++A 
Sbjct: 583 LVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAF 642

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
               +M++  V PNV+    L++G  +     +    L KM+E+ + P+    +M++
Sbjct: 643 QYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 699



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 189/388 (48%), Gaps = 40/388 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  +T+NT++D   K G +++   ++L+MK  NI    VTYN LI+G        EA+R 
Sbjct: 273 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF 332

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   G   +  +FN +++  CK G  D+A  + D M+   + P   TY+  +   C 
Sbjct: 333 HGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 392

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+I+ A EL  SM +     D VSYN L++GY K  +  EA  L+ ++ +  I P++VT
Sbjct: 393 FGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 448

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF---- 249
           YNTL  GL E   +E A +L EEM    +  D  TY T + G  KNG +  A E++    
Sbjct: 449 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 508

Query: 250 -------------RTLGILKC-------------------ELDIQAYNCLIDGLCKSGRL 277
                        R +G L+                      D+  YN  IDGLCK G L
Sbjct: 509 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 568

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A+E  R + R  LV D VTY  +I G   +GQ   A +L+ +M    + P+VI +  L
Sbjct: 569 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVL 628

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPD 365
           I+G  +  +  +  +   +MK++ V P+
Sbjct: 629 IYGHAKAGRLEQAFQYSTEMKKRGVRPN 656



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 170/350 (48%), Gaps = 5/350 (1%)

Query: 28  KEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVV 87
           K+   +K    F +M  +   P V   N ++  L  +   N+A  ++  M++ G+ P+V+
Sbjct: 217 KKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVI 276

Query: 88  TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
           TFN ++D   K G ++   ++   M +R++  +  TY+ L++GF   GK+  A    G M
Sbjct: 277 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 336

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
              G      S+N LI GYCK    ++A  +  EM++ GI PT  TYN     L +  ++
Sbjct: 337 RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRI 396

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
           + A +L   M     A D  +YNT + G  K G  VEA  LF  L        I  YN L
Sbjct: 397 DDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTL 452

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           IDGLC+SG LE A  L   +  +++  DV+TY  ++ G   +G +  A +++ +M    +
Sbjct: 453 IDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGI 512

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKM-KEKKVMPDASIVSMVVDLL 376
            P+   + T   G +R+    K   L  +M       PD +I ++ +D L
Sbjct: 513 KPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGL 562



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 169/360 (46%), Gaps = 36/360 (10%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +  +  P+ V+YNT++ G  K G   +A  LF  ++  +I+P +VTYN+LI GLC + + 
Sbjct: 403 LSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 462

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A+RL  EM  Q + P V+T+  ++    KNG +  A+ + D M+++ ++P+ + Y+T 
Sbjct: 463 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTR 522

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVS-YNILINGYCKNKEVEEALSLYREMVSKG 186
             G    G  ++A  L   M +      D++ YN+ I+G CK   + +A+   R++   G
Sbjct: 523 AVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVG 582

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P  VTY T+  G  E  Q + A  L++EM R  +     TY   I G  K G + +A 
Sbjct: 583 LVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAF 642

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +    +       ++  +N L+ G+CK+                                
Sbjct: 643 QYSTEMKKRGVRPNVMTHNALLYGMCKA-------------------------------- 670

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              G +D+A+     MEE  + PN   +  LI       K  +V++L  +M +K++ PD 
Sbjct: 671 ---GNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDG 727



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 105/193 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   YN  IDGLCK G + KA     ++    + PD VTY ++I G      +  A+ L
Sbjct: 550 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 609

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + EM+ + + PSV+T+ V++    K G++++A +    M +R VRPN  T++ L+ G C 
Sbjct: 610 YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCK 669

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G I+ A      ME  G   +  SY +LI+  C  ++ EE + LY+EM+ K I+P   T
Sbjct: 670 AGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT 729

Query: 194 YNTLFLGLFEIHQ 206
           +  LF  L + H+
Sbjct: 730 HRALFKHLEKDHE 742



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 136/296 (45%), Gaps = 36/296 (12%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+IDGLC+ G ++ A+ L  +M  + I PDV+TY +L+ G     + + A  +
Sbjct: 444 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 503

Query: 74  FFEMMDQGVQPS------------------------------------VVTFNVIMDELC 97
           + EM+ +G++P                                     +  +NV +D LC
Sbjct: 504 YDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLC 563

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K G + +A      + +  + P+  TY+T++ G+   G+   A  L+  M         +
Sbjct: 564 KVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVI 623

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y +LI G+ K   +E+A     EM  +G++P V+T+N L  G+ +   ++ A +   +M
Sbjct: 624 TYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM 683

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
           + + +  +  +Y   I   C      E V+L++ +   + E D   +  L   L K
Sbjct: 684 EEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 739



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 108/228 (47%), Gaps = 1/228 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN-PDVVTYNSLIHGLCHANDWNEAK 71
           KP+   Y T   G  + G  DKA  L  +M   + + PD+  YN  I GLC   +  +A 
Sbjct: 513 KPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAI 572

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
               ++   G+ P  VT+  ++    +NG+   A  L D M+++ + P+  TY  L+ G 
Sbjct: 573 EFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGH 632

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G++ +A +    M+  G + + +++N L+ G CK   ++EA     +M  +GI P  
Sbjct: 633 AKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNK 692

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            +Y  L     +  + E  +KL++EM   ++  D  T+      L K+
Sbjct: 693 YSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 740



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 39/246 (15%)

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
           Y K    E+ L  + +M+ KG  P+V   N +   L +   +  A  ++E M    +   
Sbjct: 215 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 274

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
             T+NT +D   K G +    +++  +     E     YN LI+G  K+G++E A     
Sbjct: 275 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 334

Query: 286 SLPR-------------------------------RVLVADVV----TYNIMIHGLCNDG 310
            + R                                +L A +     TYNI I  LC+ G
Sbjct: 335 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 394

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++D A +L   M     AP+V+ + TL+HG++++ K  +   L   ++   + P     +
Sbjct: 395 RIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYN 450

Query: 371 MVVDLL 376
            ++D L
Sbjct: 451 TLIDGL 456


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 198/420 (47%), Gaps = 66/420 (15%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+TV Y T+I  LC +G V++A  L  +M     + DV T+N ++HGLC      EA 
Sbjct: 203 CVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAA 262

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCK-------------------------------NG 100
           RL   MM +G  P+ +T+  ++  LC                                +G
Sbjct: 263 RLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDG 322

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K+ EA+ L + M  +   P+A TYS L+ G C  G++  A +L   ME  G     V+Y 
Sbjct: 323 KLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYT 382

Query: 161 ILINGYCKN-----------------------------------KEVEEALSLYREMVSK 185
           IL++ +C+N                                   + +++A+   +EM S+
Sbjct: 383 ILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQ 442

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G KP + TYNT+   L   +Q+E A  LFE +  + V A+  TYNT I  L +NG   +A
Sbjct: 443 GYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDA 502

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           + L   + +  C LDI +YN LI  LC+ G ++ ++ L   +  + +  + V+YN++I  
Sbjct: 503 ISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISE 562

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC   ++  A +L  +M    + P+++ + TLI+G  ++      + LL K+  + V  D
Sbjct: 563 LCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHAD 622



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 168/345 (48%), Gaps = 4/345 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P T T++     LC+ G  D+A  +   M      PD V Y ++IH LC     NEA  
Sbjct: 169 PPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAAT 228

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM   G    V TFN I+  LC  G++ EA+RL+D M+ R   PNA TY  L+ G C
Sbjct: 229 LLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLC 288

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           L  ++  A  + G +  +      V +N +I     + +++EA  LY  M SKG  P   
Sbjct: 289 LASQVEEARTMLGRVPELNV----VLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAH 344

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ L  GL ++ ++  A+KL  EM+    A    TY   +   C+NG       +   +
Sbjct: 345 TYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVM 404

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 ++++ YN +I  +CK  R++ A+   + +  +    D+ TYN +I+ LCN+ QM
Sbjct: 405 SDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQM 464

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           ++A  LF ++    V  N I + TLIH  +R       I L + M
Sbjct: 465 EEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDM 509



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 170/332 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+  TY+ +I GLCK G +  A  L  +M+ +   P +VTY  L+H  C    W+  +
Sbjct: 339 CPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIR 398

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +   M D+G+  ++  +N ++  +CK+ +MD+A R +  M  +  +P+  TY+T++   
Sbjct: 399 AMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHL 458

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   ++  AE LF ++   G   + ++YN LI+   +N   ++A+SL  +MV  G    +
Sbjct: 459 CNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDI 518

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+YN L   L     V+ ++ L  EM    +  +  +YN  I  LCK   + +A+EL + 
Sbjct: 519 VSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKE 578

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +   DI  YN LI+GLCK G +  AL L   L    + AD++TYNI+I   C    
Sbjct: 579 MLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARL 638

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           +  A  L      + + PN   +  ++  FVR
Sbjct: 639 LHDASMLLNRAVTSGITPNERTWGIMVQNFVR 670



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 154/328 (46%), Gaps = 5/328 (1%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEA 105
           ++P   +YN+++     A+   +   L+  M+ +  V P+  TF++    LC+ G+ DEA
Sbjct: 132 VSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEA 191

Query: 106 SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILING 165
             +L  M +    P+   Y T++   C  G +N A  L   M  MGC  D  ++N +++G
Sbjct: 192 LTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHG 251

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
            C    + EA  L   M+ +G  P  +TY  L  GL    QVE A  +   +   +V   
Sbjct: 252 LCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVV-- 309

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
              +NT I     +G + EA EL+ T+G   C  D   Y+ LI GLCK GRL  A++L R
Sbjct: 310 --LFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLR 367

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            +  +     +VTY I++H  C +G  D    +   M +  ++ N+  +  +I    +  
Sbjct: 368 EMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDR 427

Query: 346 KPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +    +  + +MK +   PD    + ++
Sbjct: 428 RMDDAMRFMQEMKSQGYKPDICTYNTII 455


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 183/360 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PN V Y T+IDG CK G V  AK LF +M    + P+  TY+ L++G        E  +
Sbjct: 190 SPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQ 249

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++  M   G+ P+   +N ++ E C +G +D+A ++   M ++ +     TY+ L+ G C
Sbjct: 250 MYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLC 309

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K   A +L   +  +G   + V+YNILING+C   +++ A+ L+ ++ S G+ PT+V
Sbjct: 310 RGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLV 369

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G  ++  +  AL L +EM+   +A    TY   ID   +  Y  +A E+   +
Sbjct: 370 TYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLM 429

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D+  Y+ LI G C +G ++ A + F+SL    L  + V YN MIHG C +G  
Sbjct: 430 EKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSS 489

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  L  +M  + + PNV  F + +    R  K  +   LL +M    + P  S+  MV
Sbjct: 490 YRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 190/362 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  ++  +I G C+ G+  +   L   ++   ++P+VV Y +LI G C   D   AK LF
Sbjct: 157 NAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLF 216

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M   G+ P+  T++V+M+   K G   E  ++ + M +  + PNA+ Y+ L+  +C  
Sbjct: 217 CKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCND 276

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +++A ++F  M   G     ++YNILI G C+ K+  EA+ L  ++   G+ P +VTY
Sbjct: 277 GMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTY 336

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L  G  ++ +++ A++LF +++   ++    TYNT I G  K   +  A++L + +  
Sbjct: 337 NILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE 396

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                    Y  LID   +    + A E+   + +  LV DV TY+++IHG C +G M +
Sbjct: 397 RCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKE 456

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A   F  + E  + PN +I+ T+IHG+ +     + + LL++M    ++P+ +     + 
Sbjct: 457 ASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMG 516

Query: 375 LL 376
           LL
Sbjct: 517 LL 518



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 174/362 (48%), Gaps = 1/362 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C   T  Y+ I++        D+A      M  E   P   T+N+L+  L  +N +++A 
Sbjct: 85  CSTYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAW 144

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  ++   V  +  +F +++   C+ G      RLL ++ +  + PN   Y+TL+DG 
Sbjct: 145 WIF-NVLKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGC 203

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A+ LF  M+ +G   +  +Y++L+NG+ K     E   +Y  M   GI P  
Sbjct: 204 CKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNA 263

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             YN L         V+ A K+F EM+   +A    TYN  I GLC+     EAV+L   
Sbjct: 264 YAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK 323

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +    +I  YN LI+G C  G+++ A+ LF  L    L   +VTYN +I G      
Sbjct: 324 VNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVEN 383

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +  A DL  +MEE  +A + + +  LI  F R+N   K  E+   M++  ++PD    S+
Sbjct: 384 LAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSV 443

Query: 372 VV 373
           ++
Sbjct: 444 LI 445



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 184/369 (49%), Gaps = 17/369 (4%)

Query: 22  IIDGLCKEGFVDKAKALFLQMKGENINPDVVT----------------YNSLIHGLCHAN 65
           I++ L   G + +A++L L++    I   ++                 Y+++++   H++
Sbjct: 44  ILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLTQAHFTSCSTYTPLYDAIVNAYVHSH 103

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             ++A      M+ +G  P   TFN ++  L ++   D+A  + +++ +  V  NA+++ 
Sbjct: 104 STDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVL-KSKVVLNAYSFG 162

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            ++ G C  G   R   L   +E  G   + V Y  LI+G CKN +V  A +L+ +M   
Sbjct: 163 IMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRL 222

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G+ P   TY+ L  G F+        +++E M R  +  +   YN  I   C +G + +A
Sbjct: 223 GLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKA 282

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            ++F  +        +  YN LI GLC+  +   A++L   + +  L  ++VTYNI+I+G
Sbjct: 283 FKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILING 342

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            C+ G+MD A  LF  ++ + ++P ++ + TLI G+ ++   +  ++L+ +M+E+ +   
Sbjct: 343 FCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARS 402

Query: 366 ASIVSMVVD 374
               ++++D
Sbjct: 403 KVTYTILID 411


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 186/357 (52%), Gaps = 5/357 (1%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++N +I+G CK+G  D A  +  +M    I P   TYN  I  LC     ++A+    E+
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR----EL 365

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +     P VV++N +M    K GK  EAS L D +   D+ P+  TY+TL+DG C +G +
Sbjct: 366 LSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A+ L   M +     D ++Y  L+ G+ KN  +  A  +Y EM+ KGIKP    Y T 
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTR 485

Query: 198 FLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
            +G   +   + A +L EEM   D  A D + YN  IDGLCK G +V+A+E  R +  + 
Sbjct: 486 AVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVG 545

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              D   Y  +I G  ++G+ ++A  L+  + R+ L   V+TY ++I+G    G++++A 
Sbjct: 546 LVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAF 605

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
               +M++  V PNV+    L++G  +     +    L KM+E+ + P+    +M++
Sbjct: 606 QYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 189/388 (48%), Gaps = 40/388 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  +T+NT++D   K G +++   ++L+MK  NI    VTYN LI+G        EA+R 
Sbjct: 236 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF 295

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   G   +  +FN +++  CK G  D+A  + D M+   + P   TY+  +   C 
Sbjct: 296 HGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 355

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+I+ A EL  SM +     D VSYN L++GY K  +  EA  L+ ++ +  I P++VT
Sbjct: 356 FGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 411

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF---- 249
           YNTL  GL E   +E A +L EEM    +  D  TY T + G  KNG +  A E++    
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471

Query: 250 -------------RTLGILKC-------------------ELDIQAYNCLIDGLCKSGRL 277
                        R +G L+                      D+  YN  IDGLCK G L
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 531

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A+E  R + R  LV D VTY  +I G   +GQ   A +L+ +M    + P+VI +  L
Sbjct: 532 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVL 591

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPD 365
           I+G  +  +  +  +   +MK++ V P+
Sbjct: 592 IYGHAKAGRLEQAFQYSTEMKKRGVRPN 619



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 170/350 (48%), Gaps = 5/350 (1%)

Query: 28  KEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVV 87
           K+   +K    F +M  +   P V   N ++  L  +   N+A  ++  M++ G+ P+V+
Sbjct: 180 KKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVI 239

Query: 88  TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
           TFN ++D   K G ++   ++   M +R++  +  TY+ L++GF   GK+  A    G M
Sbjct: 240 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 299

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
              G      S+N LI GYCK    ++A  +  EM++ GI PT  TYN     L +  ++
Sbjct: 300 RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRI 359

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
           + A +L   M     A D  +YNT + G  K G  VEA  LF  L        I  YN L
Sbjct: 360 DDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTL 415

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           IDGLC+SG LE A  L   +  +++  DV+TY  ++ G   +G +  A +++ +M    +
Sbjct: 416 IDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGI 475

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKM-KEKKVMPDASIVSMVVDLL 376
            P+   + T   G +R+    K   L  +M       PD +I ++ +D L
Sbjct: 476 KPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGL 525



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 169/360 (46%), Gaps = 36/360 (10%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +  +  P+ V+YNT++ G  K G   +A  LF  ++  +I+P +VTYN+LI GLC + + 
Sbjct: 366 LSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
             A+RL  EM  Q + P V+T+  ++    KNG +  A+ + D M+++ ++P+ + Y+T 
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTR 485

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVS-YNILINGYCKNKEVEEALSLYREMVSKG 186
             G    G  ++A  L   M +      D++ YN+ I+G CK   + +A+   R++   G
Sbjct: 486 AVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVG 545

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P  VTY T+  G  E  Q + A  L++EM R  +     TY   I G  K G + +A 
Sbjct: 546 LVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAF 605

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +    +       ++  +N L+ G+CK+                                
Sbjct: 606 QYSTEMKKRGVRPNVMTHNALLYGMCKA-------------------------------- 633

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              G +D+A+     MEE  + PN   +  LI       K  +V++L  +M +K++ PD 
Sbjct: 634 ---GNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDG 690



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 105/193 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   YN  IDGLCK G + KA     ++    + PD VTY ++I G      +  A+ L
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 572

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + EM+ + + PSV+T+ V++    K G++++A +    M +R VRPN  T++ L+ G C 
Sbjct: 573 YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCK 632

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G I+ A      ME  G   +  SY +LI+  C  ++ EE + LY+EM+ K I+P   T
Sbjct: 633 AGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT 692

Query: 194 YNTLFLGLFEIHQ 206
           +  LF  L + H+
Sbjct: 693 HRALFKHLEKDHE 705



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 136/296 (45%), Gaps = 36/296 (12%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+IDGLC+ G ++ A+ L  +M  + I PDV+TY +L+ G     + + A  +
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 466

Query: 74  FFEMMDQGVQPS------------------------------------VVTFNVIMDELC 97
           + EM+ +G++P                                     +  +NV +D LC
Sbjct: 467 YDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLC 526

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K G + +A      + +  + P+  TY+T++ G+   G+   A  L+  M         +
Sbjct: 527 KVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVI 586

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y +LI G+ K   +E+A     EM  +G++P V+T+N L  G+ +   ++ A +   +M
Sbjct: 587 TYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM 646

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
           + + +  +  +Y   I   C      E V+L++ +   + E D   +  L   L K
Sbjct: 647 EEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 108/228 (47%), Gaps = 1/228 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN-PDVVTYNSLIHGLCHANDWNEAK 71
           KP+   Y T   G  + G  DKA  L  +M   + + PD+  YN  I GLC   +  +A 
Sbjct: 476 KPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAI 535

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
               ++   G+ P  VT+  ++    +NG+   A  L D M+++ + P+  TY  L+ G 
Sbjct: 536 EFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGH 595

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G++ +A +    M+  G + + +++N L+ G CK   ++EA     +M  +GI P  
Sbjct: 596 AKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNK 655

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
            +Y  L     +  + E  +KL++EM   ++  D  T+      L K+
Sbjct: 656 YSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 703



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 39/246 (15%)

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
           Y K    E+ L  + +M+ KG  P+V   N +   L +   +  A  ++E M    +   
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
             T+NT +D   K G +    +++  +     E     YN LI+G  K+G++E A     
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297

Query: 286 SLPR-------------------------------RVLVADVV----TYNIMIHGLCNDG 310
            + R                                +L A +     TYNI I  LC+ G
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 357

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++D A +L   M     AP+V+ + TL+HG++++ K  +   L   ++   + P     +
Sbjct: 358 RIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYN 413

Query: 371 MVVDLL 376
            ++D L
Sbjct: 414 TLIDGL 419


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 176/357 (49%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C P  V YN +IDG C+ G V +   L  +M+ + I P VVTY ++IH L   +D  
Sbjct: 304 GEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLT 363

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           + + L +EM ++G+ P+V  +N ++  LCK     +A  +L+ MV     P+  T++TL+
Sbjct: 364 KIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLI 423

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
             FC  G +  A +L         + + +SY  LI+G+C   EV  A  L  EM+ +G  
Sbjct: 424 AAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHT 483

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVT   L  GL    QV+ AL + E+M    V  D + YN  I GLCK   +  A  L
Sbjct: 484 PDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNL 543

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +   K + D   Y  LIDG  +S +L  A ++F  +  +    D+V YN MI G C 
Sbjct: 544 LVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCK 603

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            G M++A      M +    P+   + TLI G+ +       +  L  M +++  P+
Sbjct: 604 SGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPN 660



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 175/352 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTY  II  L ++  + K ++L  +MK   ++P+V  YN++I+ LC     ++A  +
Sbjct: 344 PTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAV 403

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+     P VVTFN ++   C+ G ++EA +LL   ++R++ PN  +Y+ L+ GFC+
Sbjct: 404 LNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCV 463

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A +L   M   G   D V+   LI+G   + +V+EAL +  +M  + + P    
Sbjct: 464 RGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANI 523

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  GL +   +  A  L  EM    V  D   Y T IDG  ++  + +A ++F  + 
Sbjct: 524 YNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFME 583

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 DI AYN +I G CKSG +  A+    S+ +   + D  TY  +I G    G + 
Sbjct: 584 EKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIK 643

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            A     DM +    PN++ + +LI G+  I        L   M+ + + P+
Sbjct: 644 AALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPN 695



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 176/364 (48%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PN   YNT+I  LCK     +A A+  QM     +PDVVT+N+LI   C   D  EA +
Sbjct: 378 SPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALK 437

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  E + + ++P+ +++  ++   C  G++  AS LL  M+ R   P+  T   L+ G  
Sbjct: 438 LLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLV 497

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           ++G+++ A  +   M       D   YN+LI+G CK + +  A +L  EM+ + ++P   
Sbjct: 498 VSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKF 557

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y TL  G     ++  A K+FE M+      D   YN  I G CK+G + EAV    ++
Sbjct: 558 VYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSM 617

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             + C  D   Y  LIDG  K G ++ AL     + +R    ++VTY  +I G CN G  
Sbjct: 618 RKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNT 677

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  LF  M+   + PNV+ +  LI    + +K  +       M      P+ + +  +
Sbjct: 678 DSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYL 737

Query: 373 VDLL 376
           V+ L
Sbjct: 738 VNGL 741



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 168/357 (47%), Gaps = 15/357 (4%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           IG    P+ VT   +I GL   G VD+A  +  +M    + PD   YN LI GLC     
Sbjct: 478 IGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRML 537

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           + AK L  EM++Q VQP    +  ++D   ++ K+ +A ++ + M ++    +   Y+ +
Sbjct: 538 SAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAM 597

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G+C +G +N A     SM  +GC  D+ +Y  LI+GY K  +++ AL    +M+ +  
Sbjct: 598 IKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRC 657

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP +VTY +L  G   I   + A  LF  MQ + +  +   Y   I  L K    ++A  
Sbjct: 658 KPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAA 717

Query: 248 LFRTLGILKCELDIQAYNCLIDGL--CKSG-------------RLEIALELFRSLPRRVL 292
            F  + +  C  +    + L++GL  C+ G             +    L++F+ L    L
Sbjct: 718 YFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGL 777

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
              +  YN +I  LC    + KA +L   M      P+ + F++L++GF  + K  K
Sbjct: 778 DPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSGK 834



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 140/274 (51%), Gaps = 2/274 (0%)

Query: 105 ASRLLDLMVQRDVRPNAFTYST--LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
           A RL   M+ RD    A  YST  ++ G CL G++     L  +    GC    V YN+L
Sbjct: 258 ARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVL 317

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           I+GYC+  +V   L L  EM  KGI PTVVTY  +   L     +     L  EM+   +
Sbjct: 318 IDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGL 377

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
           + +   YNT I  LCK     +A+ +   +   + + D+  +N LI   C+ G +E AL+
Sbjct: 378 SPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALK 437

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           L R   RR L  + ++Y  +IHG C  G++  A DL ++M      P+V+    LIHG V
Sbjct: 438 LLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLV 497

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              +  + + +  KM E++VMPDA+I ++++  L
Sbjct: 498 VSGQVDEALMVREKMAERQVMPDANIYNVLISGL 531



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 157/328 (47%), Gaps = 2/328 (0%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFN--VIMDELCKNGKMDEAS 106
           PD    N L+  L     W  A+RL+ EM+ +  +     ++  V++  LC  G+++E  
Sbjct: 237 PDAPHCNRLLRLLVDRRRWECARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGR 296

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
           RL++        P A  Y+ L+DG+C  G + R   L G ME  G     V+Y  +I+  
Sbjct: 297 RLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWL 356

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
            +  ++ +  SL  EM  +G+ P V  YNT+   L +      AL +  +M       D 
Sbjct: 357 GRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDV 416

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            T+NT I   C+ G + EA++L R     + E +  +Y  LI G C  G + +A +L   
Sbjct: 417 VTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVE 476

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +  R    DVVT   +IHGL   GQ+D+A  +   M E  V P+  I+  LI G  +   
Sbjct: 477 MIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRM 536

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVD 374
            S    LL +M E+KV PD  + + ++D
Sbjct: 537 LSAAKNLLVEMLEQKVQPDKFVYTTLID 564



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 164/358 (45%), Gaps = 2/358 (0%)

Query: 19  YNT--IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           Y+T  ++ GLC EG V++ + L     GE   P  V YN LI G C   D      L  E
Sbjct: 277 YSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGE 336

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M  +G+ P+VVT+  I+  L +   + +   LL  M +R + PN   Y+T++   C    
Sbjct: 337 MEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRS 396

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
            ++A  +   M +     D V++N LI  +C+  +VEEAL L RE + + ++P  ++Y  
Sbjct: 397 ASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTP 456

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G     +V  A  L  EM       D  T    I GL  +G + EA+ +   +   +
Sbjct: 457 LIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQ 516

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              D   YN LI GLCK   L  A  L   +  + +  D   Y  +I G     ++  A 
Sbjct: 517 VMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDAR 576

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +F  MEE     +++ +  +I G+ +    ++ +  +  M++   +PD    + ++D
Sbjct: 577 KIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLID 634



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 18/152 (11%)

Query: 12  CKPNTVTYNTIIDGL--CKEGFVD----------KAKALFLQMKG---ENINPDVVTYNS 56
           C PN  T + +++GL  C+ G ++          K  AL    KG   + ++P +  YN+
Sbjct: 727 CSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNA 786

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
           +I  LC  N   +A  L  +M ++G  P  VTF  ++      GK  +    L    Q+D
Sbjct: 787 IIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSGKWRSALPNEFQQD 846

Query: 117 VRPNAFTYSTLMDGFCLTG---KINRAEELFG 145
                  Y TL++   ++    +++R  +L+ 
Sbjct: 847 EFEIICKYMTLLNQHVMSPVRDEVSRVLQLYA 878


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 192/398 (48%), Gaps = 35/398 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+T TY  +I   C  G  DKA  +  +M  +   P+V TY  LI  LC      EA 
Sbjct: 230 CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEAN 289

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F +M+  G+ P ++TFN +++  CK G +  A +LL +M + + +PN  TY+ LM+G 
Sbjct: 290 GVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGL 349

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K  +A  L   +   G   D V+YNIL++G+CK  ++  A +++  M S G++P  
Sbjct: 350 CRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDG 409

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+  L  GL ++ ++E A  +   M +  ++ D  T+   IDG CK G   +   LF  
Sbjct: 410 FTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFEN 469

Query: 252 LGILKCELDIQAYNC-----------------------------------LIDGLCKSGR 276
           +   +C      +NC                                   LI+G C++G 
Sbjct: 470 MVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGE 529

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
             ++L++   + +     +V TY I+I+GLCN+G++++A  +   M    V+PN   +  
Sbjct: 530 TALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAV 589

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           L+   V+  +  +  +++  M +    P++ I S ++ 
Sbjct: 590 LVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLS 627



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 191/431 (44%), Gaps = 71/431 (16%)

Query: 17  VTYNTIIDGLCKEGFVDKAK-----------------------------------ALFLQ 41
           + Y T+++ LCK GFV  A+                                    +F +
Sbjct: 129 IDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEK 188

Query: 42  M-KGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
           M K E+  P+ VTY+ LIHGLC A    EA +L  EM+++G QPS  T+ V++   C  G
Sbjct: 189 MSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIG 248

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
             D+A ++LD M  +   PN  TY+ L+D  C  GKI  A  +F  M   G     +++N
Sbjct: 249 MTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFN 308

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            LINGYCK   V  A  L   M     KP + TYN L  GL  + +   A  L   +  +
Sbjct: 309 ALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN 368

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            +  D  TYN  +DG CK G +  A  +F ++     E D   +  LIDGLCK GRLE A
Sbjct: 369 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 428

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN--------------- 325
             +  S+ ++ +  D VT+  +I G C  G+      LF +M EN               
Sbjct: 429 NGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDA 488

Query: 326 --------------------AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
                                + P+V+    LI G  R  + +  +++L +MK+    P+
Sbjct: 489 LGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 548

Query: 366 ASIVSMVVDLL 376
               +++++ L
Sbjct: 549 VYTYTIIINGL 559



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 174/332 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  +T+N +I+G CKEG+V  A  L   M+  N  P++ TYN L+ GLC  +   +A  L
Sbjct: 302 PGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLL 361

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              ++D G+ P  VT+N+++D  CK G+++ A  + + M    + P+ FT++ L+DG C 
Sbjct: 362 LRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCK 421

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++ +A  + GSM   G   D+V++  LI+G+CK  + ++   L+  MV      T  T
Sbjct: 422 LGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHT 481

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N     L + +++  A  +  +M +  +     T+   I+G C+ G    ++++   + 
Sbjct: 482 FNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK 541

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  ++  Y  +I+GLC +GR+E A  +  S+    +  +  TY +++      G++D
Sbjct: 542 QAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLD 601

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
           +A  +   M +N   PN  I+  L+ GFV  N
Sbjct: 602 RAFQIVSTMVKNGCQPNSHIYSALLSGFVLSN 633



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 165/357 (46%), Gaps = 36/357 (10%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG------------- 100
           Y++L+  L   N    A  ++  M+++G     + +  +++ LCKNG             
Sbjct: 96  YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 155

Query: 101 ----------------------KMDEASRLLDLMVQRD-VRPNAFTYSTLMDGFCLTGKI 137
                                  + EA R+ + M + +  RPN+ TYS L+ G C  G++
Sbjct: 156 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRL 215

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A +L   M   GC+    +Y +LI   C     ++A+ +  EM +K   P V TY  L
Sbjct: 216 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 275

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
              L    ++E A  +F +M +  +     T+N  I+G CK G++V A +L   +    C
Sbjct: 276 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 335

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           + +I+ YN L++GLC+  +   A  L R +    L+ D VTYNI++ G C +GQ++ A +
Sbjct: 336 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFN 395

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +F  M    + P+   F  LI G  ++ +  +   +L  M +K +  D    + ++D
Sbjct: 396 IFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALID 452



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 151/295 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN  TYN +++GLC+     KA  L  ++    + PD VTYN L+ G C     N A 
Sbjct: 335 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 394

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M   G++P   TF  ++D LCK G++++A+ +L  MV++ +  +  T++ L+DG 
Sbjct: 395 NIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGH 454

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK      LF +M    C     ++N  ++   K+ ++ EA ++  +M+  G+ P+V
Sbjct: 455 CKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSV 514

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+  L  G     +   +LK+ E M++   + +  TY   I+GLC NG + EA  +  +
Sbjct: 515 VTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFS 574

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +       +   Y  L+    K+GRL+ A ++  ++ +     +   Y+ ++ G 
Sbjct: 575 MSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 629



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 169/329 (51%), Gaps = 11/329 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C     T+N  +D L K+  +++A A+  +M    + P VVT+  LI G C A +   + 
Sbjct: 475 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 534

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++   M   G  P+V T+ +I++ LC NG+++EA  +L  M    V PN FTY+ L+   
Sbjct: 535 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAH 594

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV--EEALSLYREMVSKGIKP 189
              G+++RA ++  +M   GC+ +   Y+ L++G+  +       ALS   ++ ++ +  
Sbjct: 595 VKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSS 654

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
                N L   +F +  V+HALK+ +E+++  V  +   YN  + GLCK G I+EA +L 
Sbjct: 655 EENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTE-DLYNFLVVGLCKEGRIIEADQLT 713

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + + +       +A + +I+  CK+ + +  LE  + +     V    +Y  +IHGL N+
Sbjct: 714 QDM-VKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNE 772

Query: 310 GQMDKAHDLFLDM-------EENAVAPNV 331
           G++ +A  L  D+       EE  V P++
Sbjct: 773 GRVQEAQKLVSDLVRHTGIEEEVEVTPSI 801



 Score =  138 bits (348), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 181/368 (49%), Gaps = 14/368 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  T+  +IDGLCK G +++A  +   M  + I+ D VT+ +LI G C      +   
Sbjct: 406 EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF 465

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M++     +  TFN  +D L K+ K++EA+ +L  M++  + P+  T++ L++G C
Sbjct: 466 LFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 525

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+   + ++   M+  GC  +  +Y I+ING C N  VEEA ++   M S G+ P   
Sbjct: 526 RAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHF 585

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L     +  +++ A ++   M ++    ++  Y+  + G   +   + A  L  T 
Sbjct: 586 TYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSST- 644

Query: 253 GILKCELDIQAY-------NCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
                +LD ++        NCL   + +   ++ AL++ R   ++  V     YN ++ G
Sbjct: 645 ----GDLDARSLSSEENDNNCLSSHVFRLMDVDHALKI-RDEIKKCGVPTEDLYNFLVVG 699

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC +G++ +A  L  DM ++ + P+  I  ++I  + +  K    +E +  + + K +P 
Sbjct: 700 LCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPS 758

Query: 366 ASIVSMVV 373
            +    V+
Sbjct: 759 FASYCWVI 766



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 146/347 (42%), Gaps = 75/347 (21%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM---GCKHDDVS 158
           +D   +LL ++V RD+   A     L+   C   + N   +L G+++ M   G +     
Sbjct: 37  LDGRIQLLGVLVSRDLFGVAQKAVVLLIQECEDSE-NGVVKLMGALDGMTELGFRLSYPC 95

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT---------------------L 197
           Y+ L+    K      A  +YR MV++G     + Y T                     L
Sbjct: 96  YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 155

Query: 198 FLGL-FEIH-------------QVEHALKLFEEMQRDDVAADTS-TYNTFIDGLCKNGYI 242
            LG   + H              +  A ++FE+M +++     S TY+  I GLC+ G +
Sbjct: 156 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRL 215

Query: 243 VEAVEL------------FRTLGIL---KCEL--------------------DIQAYNCL 267
            EA +L             RT  +L   KC++                    ++  Y  L
Sbjct: 216 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 275

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           ID LC+ G++E A  +FR + +  L   ++T+N +I+G C +G +  A  L   ME+   
Sbjct: 276 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 335

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            PN+  +  L+ G  R++K  K   LL ++ +  ++PD    +++VD
Sbjct: 336 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVD 382



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 5/198 (2%)

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M   G + +   Y+TL + L +++    A  ++  M  +        Y T ++ LCKNG+
Sbjct: 84  MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 143

Query: 242 IVEAVELFRTLGILKCELDIQAYNC--LIDGLCKSGRLEIALELFRSLPR-RVLVADVVT 298
            V+A E+F    +L+    +  + C  L+   C+   L  A  +F  + +      + VT
Sbjct: 144 -VQAAEMF-CCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVT 201

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y+I+IHGLC  G++++A  L  +M E    P+   +  LI     I    K +++L +M 
Sbjct: 202 YSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMA 261

Query: 359 EKKVMPDASIVSMVVDLL 376
            K  +P+    ++++D L
Sbjct: 262 TKACVPNVHTYTILIDRL 279


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 183/376 (48%), Gaps = 16/376 (4%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V   +    LC  G  +KA  +  +M G    PD  TY+ +I  LC+A+    A  LF
Sbjct: 453 NKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLF 512

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM   GV P V T+ +++D   K G + +A   LD MV+    P   TY+TL+  +   
Sbjct: 513 KEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKA 572

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-------- 186
            K++ A ELF  M + GC  + ++Y  LI+GYCK+  +E+A  +Y  M            
Sbjct: 573 KKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMY 632

Query: 187 --------IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
                    KP VVTY  L  GL + H+V+ A  L E M  D    +T  Y+  IDG CK
Sbjct: 633 FKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCK 692

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
              + EA E+F  +       ++  Y+ LID L K  RL++ L++   +       ++V 
Sbjct: 693 AAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVI 752

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y  MI GL    + D+A+ L L MEE    PNV+ +  +I GF +  K  K +EL  +M 
Sbjct: 753 YTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMG 812

Query: 359 EKKVMPDASIVSMVVD 374
            K   P+    +++++
Sbjct: 813 SKGCAPNFVTYTVLIN 828



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 183/349 (52%), Gaps = 16/349 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTY  ++DGLCK   V  A+ L   M  +   P+ + Y++LI G C A   +EA+ 
Sbjct: 642 KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQE 701

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +M+++G  P+V T++ ++D L K+ ++D   ++L  M++    PN   Y+ ++DG  
Sbjct: 702 VFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K + A +L   ME  GCK + V+Y  +I+G+ K  +V++ L L+REM SKG  P  V
Sbjct: 762 KVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFV 821

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L         ++ A  L EEM++       S+Y   I+G  +        E   +L
Sbjct: 822 TYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR--------EFILSL 873

Query: 253 GILK------CELDIQAYNCLIDGLCKSGRLEIALELFRSL--PRRVLVADVVTYNIMIH 304
           G+L+          I  Y  LID   K+GRLE+ALEL + +      + A    Y  +I+
Sbjct: 874 GLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIY 933

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
                 ++D A +LF DM  + V P++  FV L+ G +R+ +  + ++L
Sbjct: 934 SFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQL 982



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 186/391 (47%), Gaps = 56/391 (14%)

Query: 4   GNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH 63
           GNG +     P+T TY+ +I  LC    V+ A  LF +MKG  + PDV TY  LI     
Sbjct: 482 GNGFV-----PDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSK 536

Query: 64  ANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
           A    +A     EM+  G +P+VVT+  ++    K  K+  A+ L +LM+ +   PN  T
Sbjct: 537 AGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVIT 596

Query: 124 YSTLMDGFCLTGKINRAEELFGSME----------------SMGCKHDDVSYNILI---- 163
           Y+ L+DG+C +G I +A +++  M                 ++  K + V+Y  L+    
Sbjct: 597 YTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLC 656

Query: 164 -------------------------------NGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                                          +G+CK  +++EA  ++ +MV +G  P V 
Sbjct: 657 KAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVY 716

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY++L   LF+  +++  LK+  +M  +  A +   Y   IDGL K     EA +L   +
Sbjct: 717 TYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMM 776

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C+ ++  Y  +IDG  K+G+++  LELFR +  +    + VTY ++I+  C  G +
Sbjct: 777 EEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHL 836

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           D+A+ L  +M++     +V  +  +I G+ R
Sbjct: 837 DEAYALLEEMKQTYWPKHVSSYCKVIEGYKR 867



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 172/420 (40%), Gaps = 57/420 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNT+ YN +I GLC+  F ++A     +M+  +  P+V TY  L+ G  +       KR+
Sbjct: 306 PNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRI 365

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+ +G  PS   FN ++   CK+     A +LL  M + + +P    Y+ L+   C 
Sbjct: 366 LSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICS 425

Query: 134 T-----------------------------------------GKINRAEELFGSMESMGC 152
                                                     GK  +A ++   M   G 
Sbjct: 426 GGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGF 485

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
             D  +Y+ +I   C    VE A  L++EM   G+ P V TY  L     +   ++ A  
Sbjct: 486 VPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHN 545

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
             +EM RD       TY T I    K   +  A ELF  +    C  ++  Y  LIDG C
Sbjct: 546 WLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYC 605

Query: 273 KSGRLEIALELFRSLPRRVLVAD----------------VVTYNIMIHGLCNDGQMDKAH 316
           KSG +E A +++  +     + D                VVTY  ++ GLC   ++  A 
Sbjct: 606 KSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDAR 665

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           DL   M  +   PN I++  LI GF +  K  +  E+ HKM E+   P+    S ++D L
Sbjct: 666 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRL 725



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 160/396 (40%), Gaps = 44/396 (11%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N +I   C+ G  + A     ++K     P  +TYN+L+     A+  + A+ +  EM +
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
            G+     T       LCK GK  EA   L L+ + D  PN   Y+ ++ G C       
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREA---LSLIEKEDFVPNTILYNKMISGLCEASFFEE 326

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A +    M S  C  +  +Y IL+ G    K++     +   M+++G  P+   +N+L  
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI----------------- 242
              +     +A KL ++M++ +       YN  I  +C  G +                 
Sbjct: 387 AYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEML 446

Query: 243 --------VEAVELFRTL-GILKCE---------------LDIQAYNCLIDGLCKSGRLE 278
                   V  V   R L G  K E                D   Y+ +I  LC + R+E
Sbjct: 447 SAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVE 506

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A  LF+ +    +V DV TY I+I      G + +AH+   +M  +   P V+ + TLI
Sbjct: 507 NAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLI 566

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           H +++  K S   EL   M  K   P+    + ++D
Sbjct: 567 HAYLKAKKVSVANELFELMIAKGCFPNVITYTALID 602



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 8/252 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN V Y  +IDGL K    D+A  L L M+ +   P+VVTY ++I G   A   ++  
Sbjct: 746 CAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCL 805

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM  +G  P+ VT+ V+++  C  G +DEA  LL+ M Q     +  +Y  +++G+
Sbjct: 806 ELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY 865

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +   +  L   +E  G     + Y +LI+ + K   +E AL L++E++S  +  T 
Sbjct: 866 --KREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTA 923

Query: 192 VT--YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
               Y +L        +++HA +LF +M RD V  D  T+   + GL +     EA++L 
Sbjct: 924 KKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLS 983

Query: 250 RTLGILKCELDI 261
            +L    C++DI
Sbjct: 984 DSL----CQMDI 991



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 119/296 (40%), Gaps = 15/296 (5%)

Query: 90  NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
           NV++ + C+NG  + A   L  +     +P   TY+ L+  F    K++ A+ +   M  
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
           +G   D+ +        CK  +  EALSL  +   +   P  + YN +  GL E    E 
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEE 326

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           A+     M+      +  TY   + G      +     +   +    C      +N L+ 
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM---------DKAHDLFL 320
             CKS     A +L + + +       V YNI+I  +C+ G++         +KA++  L
Sbjct: 387 AYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEML 446

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                    NV+ F   + GF +  K  KVI   H+M     +PD S  S V+  L
Sbjct: 447 SAGTVLNKVNVVSFARCLCGFGKFEKAYKVI---HEMMGNGFVPDTSTYSEVIGFL 499


>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
 gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
           Group]
 gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
          Length = 618

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 193/360 (53%), Gaps = 1/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+I+    +G V KA  ++ QM    I+P+VVTY ++I  LC  +   +A+ L
Sbjct: 171 PSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGL 230

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM + G++P++ T+N +M    K   +  A      +++  + PN   ++TL+DG C 
Sbjct: 231 FLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQ 290

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +I  A+ +F  M           YN LI+G  ++   +EAL+ ++E++ KG++P   T
Sbjct: 291 ANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFT 350

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            + +  GL +  Q++ A +  E MQ+  +A + + YN  ID  CK+G + EA+     + 
Sbjct: 351 CSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMS 410

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  E ++  Y+ LIDG  K+G +EIA+ ++  +  + +  +VVTY  +IHG   +G MD
Sbjct: 411 EVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMD 470

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK-EKKVMPDASIVSMV 372
            A  L  +MEE  +  N I    L+ G  R N+    +  + +   +KK   + SI + V
Sbjct: 471 AAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSV 530



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 181/363 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P     N I+DGL K   + +   LF +M G  + P VVTYN+LI+   H  D  +A  +
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +M+ + + P+VVT+  ++  LC+   + +A  L   M +  +RPN +TY+ LM     
Sbjct: 196 WDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              I  A   +  +   G   +DV +  LI+G C+   + EA +++ +M    + PTV  
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPV 315

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L  G F     + AL  F+E+ R  +  D  T +  + GLC  G +  A      + 
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQ 375

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                L+  AYN LID  CKSG L+ AL     +    +  +VVTY+ +I G   +G+M+
Sbjct: 376 QSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEME 435

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  ++ +M    V PNV+ +  LIHG  +         L  +M+EK +  +A  VS++V
Sbjct: 436 IAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLV 495

Query: 374 DLL 376
           D L
Sbjct: 496 DGL 498



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 109/323 (33%), Positives = 174/323 (53%), Gaps = 6/323 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V + T+IDGLC+   + +AK +FL M    + P V  YNSLIHG   +    EA   
Sbjct: 276 PNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAF 335

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E++ +G++P   T ++++  LC  G+M  A+R L++M Q  +  NA  Y+ L+D +C 
Sbjct: 336 FQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCK 395

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G ++ A      M  +G + + V+Y+ LI+G+ KN E+E A+++Y EMV+KG++P VVT
Sbjct: 396 SGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVT 455

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE-LFRTL 252
           Y  L  G  +   ++ A  L +EM+   + ++  T +  +DGLC+   + +AV  +    
Sbjct: 456 YTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYS 515

Query: 253 GILKCELDIQ-----AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           G  K E +        Y  LI GL   G+   A   F  +    +V D  TY ++I GLC
Sbjct: 516 GQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLC 575

Query: 308 NDGQMDKAHDLFLDMEENAVAPN 330
             G +  A  L+ DM +  V P 
Sbjct: 576 MLGYVLNAMMLYADMVKVGVKPT 598



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 179/372 (48%), Gaps = 47/372 (12%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYN------------------ 55
           PN VTY T+I  LC+E  +  A+ LFL+MK   + P++ TYN                  
Sbjct: 206 PNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVF 265

Query: 56  -----------------SLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                            +LI GLC AN   EAK +F +M    V P+V  +N ++    +
Sbjct: 266 YYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFR 325

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           +G   EA      ++++ +RP+ FT S ++ G C  G++  A      M+  G   +  +
Sbjct: 326 SGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAA 385

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN+LI+ YCK+  ++EAL     M   G++P VVTY++L  G  +  ++E A+ ++ EM 
Sbjct: 386 YNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMV 445

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCKSG 275
              V  +  TY   I G  KNG +  A  L + +   GI    + +   + L+DGLC+  
Sbjct: 446 AKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITV---SVLVDGLCREN 502

Query: 276 RLEIALELF------RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           R++ A+         +   +   +A+ VTY  +I+GL  DGQ ++A   F  M ++ + P
Sbjct: 503 RVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVP 562

Query: 330 NVIIFVTLIHGF 341
           +   +  +I G 
Sbjct: 563 DRFTYTLVIRGL 574



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 107/190 (56%), Gaps = 8/190 (4%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+GV  +PN VTY+++IDG  K G ++ A A++ +M  + + P+VVTY +LIHG     D
Sbjct: 411 EVGV--EPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGD 468

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR-LLDLMVQRDVR-----PN 120
            + A  L  EM ++G+  + +T +V++D LC+  ++ +A R +++   Q+         N
Sbjct: 469 MDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIAN 528

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
           + TY TL+ G  + G+ N A   F  M   G   D  +Y ++I G C    V  A+ LY 
Sbjct: 529 SVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYA 588

Query: 181 EMVSKGIKPT 190
           +MV  G+KPT
Sbjct: 589 DMVKVGVKPT 598


>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
 gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
          Length = 664

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 202/375 (53%), Gaps = 13/375 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEAKR 72
           P+ +T+N+++  L K G  + A ++F +M G   + PD  T+N LI G C  +  +E  R
Sbjct: 130 PSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFR 189

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ--RDVRPNAFTYSTLMDG 130
            F EM     +P VVT+N ++D LC+ GK+  A  ++  MV+  +D+ P+  TY+TL+ G
Sbjct: 190 FFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRG 249

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV-SKGIKP 189
           +C+  +I+ A  +F  M S G K +D++YN LI G C+ ++ ++   +    V  +G  P
Sbjct: 250 YCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVP 309

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
              TYNTL     +    + ALK+F++M+   V  D++TY+  I  LC+ G    A +LF
Sbjct: 310 DTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLF 369

Query: 250 RTLG----ILK---CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
             L     +L+   C   + AYN + D LCK+G+   A  +FR L ++    D  +Y  +
Sbjct: 370 DKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKG-TQDPPSYKTL 428

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I G C +G  +  + L L M      P+   +V LI+GF++  +P    + L +M +   
Sbjct: 429 IIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSY 488

Query: 363 MPDASIV-SMVVDLL 376
           +P  S+  S++ +LL
Sbjct: 489 LPKTSVFHSILSELL 503



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 191/383 (49%), Gaps = 17/383 (4%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G  GV   P+T T+N +I G CK   VD+    F +M   N  PDVVTYN+L+ GLC A 
Sbjct: 160 GTYGVT--PDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAG 217

Query: 66  D----WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNA 121
                 N  K +  +M D  + P VVT+  ++   C   ++DEA  + + MV R ++PN 
Sbjct: 218 KVRIAHNVVKGMVKKMKD--LSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPND 275

Query: 122 FTYSTLMDGFCLTGKINRAEELF-GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
            TY+TL+ G C   K ++ +E+  G++   G   D  +YN L+N  C     +EAL +++
Sbjct: 276 ITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFK 335

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV-------AADTSTYNTFI 233
           +M    ++P   TY+ L   L +    E A +LF+++  +D+           + YN   
Sbjct: 336 KMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIF 395

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
           D LCKNG   +A  +FR L + K   D  +Y  LI G CK G  E   +L   + RR  V
Sbjct: 396 DFLCKNGKTHKAERVFRQL-MKKGTQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYV 454

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            D  TY ++I+G    G+   A+     M +++  P   +F +++   ++ +   +    
Sbjct: 455 PDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLKNDFARESASF 514

Query: 354 LHKMKEKKVMPDASIVSMVVDLL 376
           +  M ++K+  + ++ +  + LL
Sbjct: 515 VVLMIDRKIRQNINLSTHTMRLL 537



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 137/293 (46%), Gaps = 42/293 (14%)

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMG---CKHDDVSYNILINGYCKNKEVEEALSLY 179
           +Y  ++D     G +N A     S+E       K +D   N L+  Y       EA+ L+
Sbjct: 61  SYFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLF 120

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCK 238
             M S G+ P+V+T+N+L L L +  +   A  +F+EM     V  DT T+N  I G CK
Sbjct: 121 SLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCK 180

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV--LVADV 296
           N  + E    F+ +    CE D+  YN L+DGLC++G++ IA  + + + +++  L  DV
Sbjct: 181 NSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDV 240

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL-- 354
           VTY  ++ G C   ++D+A  +F +M    + PN I + TLI G   + K  K+ E+L  
Sbjct: 241 VTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGG 300

Query: 355 ----------------------------------HKMKEKKVMPDASIVSMVV 373
                                              KMKE KV PD++  S+++
Sbjct: 301 AVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLI 353



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 148/325 (45%), Gaps = 21/325 (6%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T TYNT+++  C  G  D+A  +F +MK   + PD  TY+ LI  LC   D+  A++L
Sbjct: 309 PDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQL 368

Query: 74  FFEMMDQ-------GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           F ++ D+       G  P V  +N I D LCKNGK  +A R+   ++++  + +  +Y T
Sbjct: 369 FDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQ-DPPSYKT 427

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ G C  G      +L   M       D  +Y +LING+ +  E   A      M+   
Sbjct: 428 LIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSS 487

Query: 187 IKPTVVTYNTLFLGL----FEIHQVEHALKLFEEMQRDDVAADTSTYN-TFIDGLCKNGY 241
             P    ++++   L    F        + + +   R ++   T T    F  GL    +
Sbjct: 488 YLPKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLRIKAF 547

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
             + VEL    G +   +D++    LI  +C++G+L  A ++      +    D+   N+
Sbjct: 548 --QIVELLYDNGYM---VDMEE---LIGFICQNGKLLDAQKMLSFCLEKGHNVDINVCNV 599

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENA 326
           +I GLC   +  +A  L+  + E +
Sbjct: 600 VIEGLCKMKRPLEAFGLYYMLVEKS 624


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 182/357 (50%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C PN + YNT+IDG CK+G ++ A  LF+++K +   P V TY ++I+G C   D+ 
Sbjct: 213 GQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFK 272

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
              RL  EM  +G+  +V  +N I+D   K+G + +A   ++ M++   +P+  TY+TL+
Sbjct: 273 AIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLI 332

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C  GK++ A++L       G   +  SY  LI+ YCK    + A +   EM  +G K
Sbjct: 333 SGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHK 392

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P +VTY  L  GL    +V+ AL + E+M    V  D   YN  + GLCK   +  A  L
Sbjct: 393 PDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLL 452

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +       D   Y  L+DG  ++G L+ A +LF     + +   +V YN MI G C 
Sbjct: 453 LAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCK 512

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            G M  A      M++  +AP+   + T+I G+V+ +      ++  +M + K  P+
Sbjct: 513 FGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPN 569



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 145/279 (51%), Gaps = 8/279 (2%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G I   CKP+ VTYNT+I G C++G V +A  L  Q  G+ + P+  +Y  LIH  C   
Sbjct: 315 GMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQG 374

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            ++ A     EM ++G +P +VT+  ++  L   G++D A  + + M++R V P+A  Y+
Sbjct: 375 GYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYN 434

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            LM G C   K+  A+ L   M       D   Y  L++G+ +N  ++EA  L+   + K
Sbjct: 435 ILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEK 494

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G+ P +V YN +  G  +   ++ A+     M++  +A D  TY+T IDG  K   +  A
Sbjct: 495 GMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGA 554

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
            ++FR +  +KC+ ++      +DGL   G L I   LF
Sbjct: 555 QKMFREMVKMKCKPNV------MDGL--QGLLLIIPSLF 585



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 171/363 (47%), Gaps = 16/363 (4%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N   Y++++  L +     + + +   M+ E ++P     + +I     +    +A  L+
Sbjct: 93  NGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELY 152

Query: 75  FEMMDQGVQ-PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + ++      P V+  N +++ L K G+++ A +   +MV+               G C 
Sbjct: 153 YFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVK---------------GLCK 197

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+    +L       GC  + + YN LI+GYCK  ++E A  L+ E+  KG  PTV T
Sbjct: 198 EGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVET 257

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  +  G  +    +   +L  EM    +  +   YNT ID   K+G+IV+AVE    + 
Sbjct: 258 YGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMI 317

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C+ DI  YN LI G C+ G++  A +L      + L+ +  +Y  +IH  C  G  D
Sbjct: 318 ECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYD 377

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A +  ++M E    P+++ +  L+HG V   +    + +  KM E+ V PDA I ++++
Sbjct: 378 RASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILM 437

Query: 374 DLL 376
             L
Sbjct: 438 SGL 440


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 183/387 (47%), Gaps = 35/387 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY  +I  LCK   + +A  L+ +MK   + P +VTY+SL+ G C     +EA +L
Sbjct: 393 PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKL 452

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + EM D+G  P+ VT+  +M    K    D A  LL+ M Q  V    +TY+ L++G  +
Sbjct: 453 YSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYM 512

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++   +E+     S G     ++YN +ING+ K   +  A  +YR+M  KGI P +VT
Sbjct: 513 VNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVT 572

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG------------- 240
           Y +   G    +  + A+KL   ++RD +  D + YN FID  CK G             
Sbjct: 573 YTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLL 632

Query: 241 ----------------------YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                                  + EA + + ++   +   D + Y  LIDG  K G + 
Sbjct: 633 KDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVA 692

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            ALEL+  +    ++ D  T+  + HGLC  G +D A  L  DM    V+PN++ +  LI
Sbjct: 693 FALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLI 752

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPD 365
           +  VR  K  +  +L  +M    V+PD
Sbjct: 753 NACVRDGKLQEAFQLHDEMLSSGVVPD 779



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 186/381 (48%), Gaps = 12/381 (3%)

Query: 5   NGEIGVV-----------CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVT 53
           NGE+G               P  VTY  +I G   EG  D+   L  QM  + + P    
Sbjct: 304 NGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYE 363

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
           +N +I GL     W +A  L   ++D GV P V T+  ++  LCK+ K+ EA  L D M 
Sbjct: 364 FNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMK 422

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
           +  V+P+  TY +L+ G+C  G+++ A +L+  M   G   ++V+Y  L+ GY K K  +
Sbjct: 423 EAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFD 482

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
            A +L  EM   G+     TYN L  GL+ +++V    ++ +    +     T TYN+ I
Sbjct: 483 NAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSII 542

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
           +G  K G +  A  ++R +       +I  Y   IDG C++   ++A++L   + R  + 
Sbjct: 543 NGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQ 602

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            D+  YN  I   C  G M +A    + + ++ + P+V ++ + + G+  +   ++  + 
Sbjct: 603 PDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKF 662

Query: 354 LHKMKEKKVMPDASIVSMVVD 374
            + M +++V+ D  I + ++D
Sbjct: 663 YYSMIKQRVVADTEIYTTLID 683



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 176/357 (49%), Gaps = 2/357 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C  +   Y+ +I    + G    A  LF +M G  + PD   Y   I GLC   D +
Sbjct: 178 GKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDAD 237

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST-L 127
            A ++  +M + G +P  +T++ ++D L K  +MDEA RL D M+    +      +T L
Sbjct: 238 RALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATML 297

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           M G+CL G++ +A +LF  + S G    +V+Y +LI G       +E   L R+M+ +G+
Sbjct: 298 MHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGL 357

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P+   +N +  GL    + + A+ L  ++  D    D  TY   I  LCK+  + EAV 
Sbjct: 358 LPSTYEFNLVIKGLLRDKRWKDAIGLL-KLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVN 416

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L+  +     +  I  Y+ L+ G C+ GR++ AL+L+  +P +    + VTY  ++ G  
Sbjct: 417 LWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYI 476

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
                D A+ L  +M +N V+     +  LI+G   +N+  +V E+L +   +  +P
Sbjct: 477 KKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVP 533



 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 161/329 (48%), Gaps = 2/329 (0%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
           A  LF +M+G+    D   Y+ +I          +A RLF EM   GV+P    + + + 
Sbjct: 169 ALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITIS 228

Query: 95  ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSME-SMGCK 153
            LCK    D A ++L  M +    P   TYS+++D      +++ A  L   M  + G K
Sbjct: 229 GLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKK 288

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            D V   +L++GYC N EV +AL L+ E+VS G+ PT VTY  L  G       +   KL
Sbjct: 289 MDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKL 348

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
             +M    +   T  +N  I GL ++    +A+ L + L +     D+  Y CLI  LCK
Sbjct: 349 CRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLK-LVVDTGVPDVFTYGCLIHWLCK 407

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
             +L  A+ L+  +    +   +VTY+ ++ G C  G+MD+A  L+ +M +    PN + 
Sbjct: 408 HQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVT 467

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           + TL+ G+++         LL++M++  V
Sbjct: 468 YTTLMKGYIKKKAFDNAYALLNEMRQNGV 496



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 141/295 (47%), Gaps = 4/295 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GV C     TYN +I+GL     V +   +  +   E   P  +TYNS+I+G   A    
Sbjct: 495 GVSC--GDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMG 552

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-VRPNAFTYSTL 127
            A  ++ +M  +G+ P++VT+   +D  C+    D A +LL + V+RD ++P+   Y+  
Sbjct: 553 SAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLL-IYVRRDGIQPDIAAYNAF 611

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D FC  G ++RA      +   G   D   YN  + GY   K + EA   Y  M+ + +
Sbjct: 612 IDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRV 671

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
                 Y TL  G  ++  V  AL+L+ EM  + V  D  T+     GLC++G I  A  
Sbjct: 672 VADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKR 731

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
           L   +  L    +I  YN LI+   + G+L+ A +L   +    +V D  TY+I+
Sbjct: 732 LLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 144/332 (43%), Gaps = 45/332 (13%)

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           +  M+ +GV P   +   ++          +A  L D M  +    +A  Y  ++   C+
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRA-CV 196

Query: 134 TGKIN-RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            G ++  A  LF  M   G K D+  Y I I+G CK ++ + AL +  +M   G +P  +
Sbjct: 197 RGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWEL 256

Query: 193 TYNTLFLGLFEIHQVEHALK------------------------------------LFEE 216
           TY+++   L ++ +++ AL+                                    LF+E
Sbjct: 257 TYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDE 316

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCK 273
           +  D V     TY   I G    G   E  +L R +   G+L    +   +N +I GL +
Sbjct: 317 VVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYE---FNLVIKGLLR 373

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
             R + A+ L + L     V DV TY  +IH LC   ++ +A +L+  M+E  V P+++ 
Sbjct: 374 DKRWKDAIGLLK-LVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVT 432

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           + +L+ G+    +  + ++L  +M +K   P+
Sbjct: 433 YHSLLLGYCEKGRMDEALKLYSEMPDKGFPPN 464



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 44/97 (45%)

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           AL LF  +  +   AD   Y+++I      G    A  LF +M    V P+  ++   I 
Sbjct: 169 ALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITIS 228

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           G  ++    + +++L KM+E    P     S VVD+L
Sbjct: 229 GLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVL 265


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 192/398 (48%), Gaps = 35/398 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+T TY  +I   C  G  DKA  +  +M  +   P+V TY  LI  LC      EA 
Sbjct: 273 CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEAN 332

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F +M+  G+ P ++TFN +++  CK G +  A +LL +M + + +PN  TY+ LM+G 
Sbjct: 333 GVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGL 392

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K  +A  L   +   G   D V+YNIL++G+CK  ++  A +++  M S G++P  
Sbjct: 393 CRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDG 452

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+  L  GL ++ ++E A  +   M +  ++ D  T+   IDG CK G   +   LF  
Sbjct: 453 FTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFEN 512

Query: 252 LGILKCELDIQAYNC-----------------------------------LIDGLCKSGR 276
           +   +C      +NC                                   LI+G C++G 
Sbjct: 513 MVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGE 572

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
             ++L++   + +     +V TY I+I+GLCN+G++++A  +   M    V+PN   +  
Sbjct: 573 TALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAV 632

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           L+   V+  +  +  +++  M +    P++ I S ++ 
Sbjct: 633 LVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLS 670



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 191/431 (44%), Gaps = 71/431 (16%)

Query: 17  VTYNTIIDGLCKEGFVDKAK-----------------------------------ALFLQ 41
           + Y T+++ LCK GFV  A+                                    +F +
Sbjct: 172 IDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEK 231

Query: 42  M-KGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
           M K EN  P+ VTY+ LIHGLC A    EA +L  EM+++G QPS  T+ V++   C  G
Sbjct: 232 MSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIG 291

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
             D+A ++LD M  +   PN  TY+ L+D  C  GKI  A  +F  M   G     +++N
Sbjct: 292 MTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFN 351

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            LINGYCK   V  A  L   M     KP + TYN L  GL  + +   A  L   +  +
Sbjct: 352 ALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN 411

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            +  D  TYN  +DG CK G +  A  +F ++     E D   +  LIDGLCK GRLE A
Sbjct: 412 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 471

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN--------------- 325
             +  S+ ++ +  D VT+  +I G C  G+      LF +M EN               
Sbjct: 472 NGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDA 531

Query: 326 --------------------AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
                                + P+V+    LI G  R  + +  +++L +MK+    P+
Sbjct: 532 LGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 591

Query: 366 ASIVSMVVDLL 376
               +++++ L
Sbjct: 592 VYTYTIIINGL 602



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 174/332 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  +T+N +I+G CKEG+V  A  L   M+  N  P++ TYN L+ GLC  +   +A  L
Sbjct: 345 PGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLL 404

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              ++D G+ P  VT+N+++D  CK G+++ A  + + M    + P+ FT++ L+DG C 
Sbjct: 405 LRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCK 464

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++ +A  + GSM   G   D+V++  LI+G+CK  + ++   L+  MV      T  T
Sbjct: 465 LGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHT 524

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N     L + +++  A  +  +M +  +     T+   I+G C+ G    ++++   + 
Sbjct: 525 FNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK 584

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  ++  Y  +I+GLC +GR+E A  +  S+    +  +  TY +++      G++D
Sbjct: 585 QAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLD 644

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
           +A  +   M +N   PN  I+  L+ GFV  N
Sbjct: 645 RAFQIVSTMVKNGCQPNSHIYSALLSGFVLSN 676



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 165/357 (46%), Gaps = 36/357 (10%)

Query: 54  YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG------------- 100
           Y++L+  L   N    A  ++  M+++G     + +  +++ LCKNG             
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 198

Query: 101 ----------------------KMDEASRLLDLMV-QRDVRPNAFTYSTLMDGFCLTGKI 137
                                  + EA R+ + M  + + RPN+ TYS L+ G C  G++
Sbjct: 199 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 258

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A +L   M   GC+    +Y +LI   C     ++A+ +  EM +K   P V TY  L
Sbjct: 259 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 318

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
              L    ++E A  +F +M +  +     T+N  I+G CK G++V A +L   +    C
Sbjct: 319 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 378

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           + +I+ YN L++GLC+  +   A  L R +    L+ D VTYNI++ G C +GQ++ A +
Sbjct: 379 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFN 438

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +F  M    + P+   F  LI G  ++ +  +   +L  M +K +  D    + ++D
Sbjct: 439 IFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALID 495



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 151/295 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN  TYN +++GLC+     KA  L  ++    + PD VTYN L+ G C     N A 
Sbjct: 378 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 437

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M   G++P   TF  ++D LCK G++++A+ +L  MV++ +  +  T++ L+DG 
Sbjct: 438 NIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGH 497

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK      LF +M    C     ++N  ++   K+ ++ EA ++  +M+  G+ P+V
Sbjct: 498 CKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSV 557

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+  L  G     +   +LK+ E M++   + +  TY   I+GLC NG + EA  +  +
Sbjct: 558 VTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFS 617

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +       +   Y  L+    K+GRL+ A ++  ++ +     +   Y+ ++ G 
Sbjct: 618 MSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 672



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 169/329 (51%), Gaps = 11/329 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C     T+N  +D L K+  +++A A+  +M    + P VVT+  LI G C A +   + 
Sbjct: 518 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 577

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++   M   G  P+V T+ +I++ LC NG+++EA  +L  M    V PN FTY+ L+   
Sbjct: 578 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAH 637

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV--EEALSLYREMVSKGIKP 189
              G+++RA ++  +M   GC+ +   Y+ L++G+  +       ALS   ++ ++ +  
Sbjct: 638 VKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSS 697

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
                N L   +F +  V+HALK+ +E+++  V  +   YN  + GLCK G I+EA +L 
Sbjct: 698 EENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTE-DLYNFLVVGLCKEGRIIEADQLT 756

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           + + +       +A + +I+  CK+ + +  LE  + +     V    +Y  +IHGL N+
Sbjct: 757 QDM-VKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNE 815

Query: 310 GQMDKAHDLFLDM-------EENAVAPNV 331
           G++ +A  L  D+       EE  V P++
Sbjct: 816 GRVQEAQKLVSDLVRHTGIEEEVEVTPSI 844



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 178/363 (49%), Gaps = 4/363 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  T+  +IDGLCK G +++A  +   M  + I+ D VT+ +LI G C      +   
Sbjct: 449 EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF 508

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF  M++     +  TFN  +D L K+ K++EA+ +L  M++  + P+  T++ L++G C
Sbjct: 509 LFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 568

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+   + ++   M+  GC  +  +Y I+ING C N  VEEA ++   M S G+ P   
Sbjct: 569 RAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHF 628

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT- 251
           TY  L     +  +++ A ++   M ++    ++  Y+  + G   +   + A  L  T 
Sbjct: 629 TYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTG 688

Query: 252 -LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            L       +    NCL   + +   ++ AL++ R   ++  V     YN ++ GLC +G
Sbjct: 689 DLDARSLSSEENDNNCLSSHVFRLMDVDHALKI-RDEIKKCGVPTEDLYNFLVVGLCKEG 747

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++ +A  L  DM ++ + P+  I  ++I  + +  K    +E +  + + K +P  +   
Sbjct: 748 RIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYC 806

Query: 371 MVV 373
            V+
Sbjct: 807 WVI 809



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 147/347 (42%), Gaps = 75/347 (21%)

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM---GCKHDDVS 158
           +D   +LL ++V RD+   A     L+   C   + N   +L G+++ M   G +     
Sbjct: 80  LDGRIQLLGVLVSRDLFGVAQKAVVLLIQECEDSE-NGVVKLMGALDGMTELGFRLSYPC 138

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT---------------------L 197
           Y+ L+    K      A  +YR MV++G     + Y T                     L
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 198

Query: 198 FLGL-FEIH-------------QVEHALKLFEEMQRDD-VAADTSTYNTFIDGLCKNGYI 242
            LG   + H              +  A ++FE+M +++    ++ TY+  I GLC+ G +
Sbjct: 199 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 258

Query: 243 VEAVEL------------FRTLGIL---KCEL--------------------DIQAYNCL 267
            EA +L             RT  +L   KC++                    ++  Y  L
Sbjct: 259 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 318

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           ID LC+ G++E A  +FR + +  L   ++T+N +I+G C +G +  A  L   ME+   
Sbjct: 319 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 378

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            PN+  +  L+ G  R++K  K   LL ++ +  ++PD    +++VD
Sbjct: 379 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVD 425



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 5/198 (2%)

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M   G + +   Y+TL + L +++    A  ++  M  +        Y T ++ LCKNG+
Sbjct: 127 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 186

Query: 242 IVEAVELFRTLGILKCELDIQAYNC--LIDGLCKSGRLEIALELFRSLPRRV-LVADVVT 298
            V+A E+F    +L+    +  + C  L+   C+   L  A  +F  + +      + VT
Sbjct: 187 -VQAAEMF-CCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVT 244

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y+I+IHGLC  G++++A  L  +M E    P+   +  LI     I    K +++L +M 
Sbjct: 245 YSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMA 304

Query: 359 EKKVMPDASIVSMVVDLL 376
            K  +P+    ++++D L
Sbjct: 305 TKACVPNVHTYTILIDRL 322


>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Cucumis sativus]
          Length = 868

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 108/293 (36%), Positives = 167/293 (56%), Gaps = 3/293 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVD--KAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           KPN VTYN +ID  C +G V+  +   +F +M    + PD +TYNSL+        W  A
Sbjct: 254 KPNLVTYNAVIDA-CGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAA 312

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           + LF EM+D+G+   V T+N ++D +CK G+MD A  ++  M  + + PN  TYST+ DG
Sbjct: 313 RNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADG 372

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G++  A  L+  M+ +G   D VSYN L++ Y K    E+AL + +EM S G+K  
Sbjct: 373 YAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKD 432

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTYN L  G  +  +     ++F+EM++D V  +  TY+T ID   K     EA+E+FR
Sbjct: 433 VVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFR 492

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
                  + D+  Y+ LI+ LCK+G ++ A+ L   + +  +  +VVTYN +I
Sbjct: 493 EFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSII 545



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/332 (33%), Positives = 180/332 (54%), Gaps = 4/332 (1%)

Query: 15  NTV-TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN-DWNEAKR 72
           NTV  ++ +I    K G+ D+A  +F  MK   + P++VTYN++I        ++     
Sbjct: 220 NTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVE 279

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR-LLDLMVQRDVRPNAFTYSTLMDGF 131
           +F EM+  GVQP  +T+N ++  +C  G + EA+R L + M+ R +  + FTY+TL+D  
Sbjct: 280 IFEEMLRNGVQPDRITYNSLL-AVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAV 338

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A E+   M       + V+Y+ + +GY K   +E+AL+LY EM   GI    
Sbjct: 339 CKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDR 398

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+YNTL     ++ + E ALK+ +EM    V  D  TYN  +DG  K G   E   +F+ 
Sbjct: 399 VSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKE 458

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +   ++  Y+ LID   K    E A+E+FR   +  L ADVV Y+ +I+ LC +G 
Sbjct: 459 MKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGL 518

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           +D A  L  +M +  + PNV+ + ++I  F R
Sbjct: 519 VDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGR 550



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 161/309 (52%), Gaps = 3/309 (0%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           AK +F   + +G   +V  F+ ++    K+G  DEA ++ + M    ++PN  TY+ ++D
Sbjct: 206 AKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVID 265

Query: 130 GFCLTGKI--NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
             C  G +   R  E+F  M   G + D ++YN L+    +    E A +L+ EM+ +GI
Sbjct: 266 A-CGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGI 324

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
              V TYNTL   + +  Q++ A ++  EM    +  +  TY+T  DG  K G + +A+ 
Sbjct: 325 DQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALN 384

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L+  +  L   LD  +YN L+    K GR E AL++ + +    +  DVVTYN ++ G  
Sbjct: 385 LYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYG 444

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G+ ++   +F +M+++ V PN++ + TLI  + + +   + +E+  + K+  +  D  
Sbjct: 445 KQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVV 504

Query: 368 IVSMVVDLL 376
           + S +++ L
Sbjct: 505 LYSELINAL 513



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 140/302 (46%), Gaps = 38/302 (12%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G  GV  K + VTYN ++DG  K+G  ++   +F +MK + + P+++TY++LI      +
Sbjct: 425 GSSGV--KKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGS 482

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            + EA  +F E    G++  VV ++ +++ LCKNG +D A  LLD M +  +RPN  TY+
Sbjct: 483 LYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYN 542

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN---------------- 169
           +++D F   G+   AE L   + +   +  +    +LI G  ++                
Sbjct: 543 SIIDAF---GRSTTAEFLVDGVGASNERQSESPSFMLIEGVDESEINWDDGHVFKFYQQL 599

Query: 170 ---------------KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
                          +E+   LS++++M    IKP VVT++ +         +E A  L 
Sbjct: 600 VSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLL 659

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           EE++  D       +   + G  +N +I +A  LF  +  +        YN L D L   
Sbjct: 660 EELRLFDNQVYGVAHGLLM-GFSENVWI-QAQYLFDEVKQMDSSTASAFYNALTDMLWHF 717

Query: 275 GR 276
           G+
Sbjct: 718 GQ 719


>gi|449488446|ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11710, mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 122/360 (33%), Positives = 187/360 (51%), Gaps = 7/360 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G    PN V YN II+G CK   ++ AK +  +M    I  +  TY +LI G       +
Sbjct: 280 GGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIYFNERTYATLIDGYARKGSLD 339

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A RL  EM++  + P    +N ++  L   G+++EAS LL  M+ R + P+ FTYS L 
Sbjct: 340 VAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTYSILT 399

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C++G +N+A  +   +       D  +YNILIN   +++ +  A  L   M+  GIK
Sbjct: 400 KGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIVGGIK 459

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA--- 245
           P +VTY T   G  +  ++E A++++++  + D  ++   YN+ +DGLCK G I  A   
Sbjct: 460 PDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIYAAKLL 519

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           V+  +  G     LD   YN L+ G C +G +E A  LF  +     + ++V+YNIMIH 
Sbjct: 520 VDKLQQNGF----LDPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMIHF 575

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC  G + +A +L   M    + P++I + TLI  FV I     VIEL   M  K  +PD
Sbjct: 576 LCKMGLIQQAMELMRAMSSQGIIPDLITYTTLITNFVEICGSKDVIELHDYMVLKGAVPD 635



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 186/408 (45%), Gaps = 72/408 (17%)

Query: 30  GFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTF 89
           G  DK   ++ +M     + +V T+N +I+ LC+     EA  + + M+   + P+VVTF
Sbjct: 193 GETDKFXNMYKEMIASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVVTF 252

Query: 90  NVIMDELCKNGKMDEA---SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
           N+I+D+  K G+MD A   +R  +++    V PN   Y+ +++GFC   ++  A+ + G 
Sbjct: 253 NMIIDKANKMGEMDLALKLTRNTEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGE 312

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M  +G   ++ +Y  LI+GY +   ++ A  L  EMV   + P    YN+L   L+   +
Sbjct: 313 MIKLGIYFNERTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGE 372

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG----------YIVE------------ 244
           +E A  L  +M    +  D  TY+    GLC +G          YIVE            
Sbjct: 373 LEEASFLLSDMINRRILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNI 432

Query: 245 -------------AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR-- 289
                        A +L  ++ +   + D+  Y   +DG CK G++E A++++    +  
Sbjct: 433 LINYMFQSRNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKAD 492

Query: 290 ------------------------RVLV--------ADVVTYNIMIHGLCNDGQMDKAHD 317
                                   ++LV         D VTYN ++HG C +G+++KA  
Sbjct: 493 GKSNLVVYNSILDGLCKQGSIYAAKLLVDKLQQNGFLDPVTYNTLLHGFCVNGEIEKAFA 552

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LFL+M       N++ +  +IH   ++    + +EL+  M  + ++PD
Sbjct: 553 LFLEMINVGSLVNIVSYNIMIHFLCKMGLIQQAMELMRAMSSQGIIPD 600



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 141/287 (49%), Gaps = 3/287 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+T  YN++I  L  EG +++A  L   M    I PD  TY+ L  GLC +   N+A R+
Sbjct: 355 PDTFVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTYSILTKGLCVSGHLNKALRV 414

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            + ++++ +     T+N++++ + ++  +  A +LL  M+   ++P+  TY T +DG C 
Sbjct: 415 HYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHCK 474

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-IKPTVV 192
            GKI  A +++        K + V YN +++G CK   +  A  L  ++   G + P  V
Sbjct: 475 EGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIYAAKLLVDKLQQNGFLDP--V 532

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  G     ++E A  LF EM       +  +YN  I  LCK G I +A+EL R +
Sbjct: 533 TYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMIHFLCKMGLIQQAMELMRAM 592

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
                  D+  Y  LI    +    +  +EL   +  +  V D  TY
Sbjct: 593 SSQGIIPDLITYTTLITNFVEICGSKDVIELHDYMVLKGAVPDRKTY 639



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 124/255 (48%), Gaps = 34/255 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY+ +  GLC  G ++KA  +   +   ++  D  TYN LI+ +  + +   AK+L
Sbjct: 390 PDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQL 449

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN------------- 120
              M+  G++P +VT+   +D  CK GK++ A ++ D  V+ D + N             
Sbjct: 450 LSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCK 509

Query: 121 ---------------------AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
                                  TY+TL+ GFC+ G+I +A  LF  M ++G   + VSY
Sbjct: 510 QGSIYAAKLLVDKLQQNGFLDPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSY 569

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           NI+I+  CK   +++A+ L R M S+GI P ++TY TL     EI   +  ++L + M  
Sbjct: 570 NIMIHFLCKMGLIQQAMELMRAMSSQGIIPDLITYTTLITNFVEICGSKDVIELHDYMVL 629

Query: 220 DDVAADTSTYNTFID 234
                D  TY +F+ 
Sbjct: 630 KGAVPDRKTYRSFVS 644



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 97/189 (51%), Gaps = 9/189 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY T +DG CKEG ++ A  ++ +    +   ++V YNS++ GLC       AK 
Sbjct: 459 KPDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIYAAKL 518

Query: 73  LFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           L  ++   G + P  VT+N ++   C NG++++A  L   M+      N  +Y+ ++   
Sbjct: 519 LVDKLQQNGFLDP--VTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMIHFL 576

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGY---CKNKEVEEALSLYREMVSKGIK 188
           C  G I +A EL  +M S G   D ++Y  LI  +   C +K+V E   L+  MV KG  
Sbjct: 577 CKMGLIQQAMELMRAMSSQGIIPDLITYTTLITNFVEICGSKDVIE---LHDYMVLKGAV 633

Query: 189 PTVVTYNTL 197
           P   TY + 
Sbjct: 634 PDRKTYRSF 642



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 117/245 (47%), Gaps = 3/245 (1%)

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+ ++   ++  M + G   +  ++N++I   C   ++ EA+ +   M+   I P VVT+
Sbjct: 193 GETDKFXNMYKEMIASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVVTF 252

Query: 195 NTLFLGLFEIHQVEHALKLF---EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           N +     ++ +++ ALKL    E +    V+ +   YN  I+G CK   +  A  +   
Sbjct: 253 NMIIDKANKMGEMDLALKLTRNTEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGE 312

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  L    + + Y  LIDG  + G L++A  L   +    L+ D   YN +I+ L  +G+
Sbjct: 313 MIKLGIYFNERTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGE 372

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +++A  L  DM    + P+   +  L  G       +K + + + + E+ ++ DA   ++
Sbjct: 373 LEEASFLLSDMINRRILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNI 432

Query: 372 VVDLL 376
           +++ +
Sbjct: 433 LINYM 437


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 183/387 (47%), Gaps = 35/387 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY  +I  LCK   + +A  L+ +MK   + P +VTY+SL+ G C     +EA +L
Sbjct: 393 PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKL 452

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + EM D+G  P+ VT+  +M    K    D A  LL+ M Q  V    +TY+ L++G  +
Sbjct: 453 YSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYM 512

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++   +E+     S G     ++YN +ING+ K   +  A  +YR+M  KGI P +VT
Sbjct: 513 VNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVT 572

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG------------- 240
           Y +   G    +  + A+KL   ++RD +  D + YN FID  CK G             
Sbjct: 573 YTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLL 632

Query: 241 ----------------------YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                                  + EA + + ++   +   D + Y  LIDG  K G + 
Sbjct: 633 KDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVA 692

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            ALEL+  +    ++ D  T+  + HGLC  G +D A  L  DM    V+PN++ +  LI
Sbjct: 693 FALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLI 752

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPD 365
           +  VR  K  +  +L  +M    V+PD
Sbjct: 753 NACVRDGKLQEAFQLHDEMLSSGVVPD 779



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 180/361 (49%), Gaps = 1/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTY  +I G   EG  D+   L  QM  + +      +N +I GL     W +A  L
Sbjct: 324 PTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGL 383

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              ++D GV P V T+  ++  LCK+ K+ EA  L D M +  V+P+  TY +L+ G+C 
Sbjct: 384 LELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCE 442

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A +L+  M   G   ++V+Y  L+ GY K K  + A +L  EM   G+     T
Sbjct: 443 KGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYT 502

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  GL+ +++V    ++ +    +     T TYN+ I+G  K G +  A  ++R + 
Sbjct: 503 YNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMR 562

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +I  Y   IDG C++   ++A++L   + R  +  D+  YN  I   C  G M 
Sbjct: 563 KKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMS 622

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A    + + ++ + P+V ++ + + G+  +   ++  +  + M +++V+ D  I + ++
Sbjct: 623 RALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLI 682

Query: 374 D 374
           D
Sbjct: 683 D 683



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 176/357 (49%), Gaps = 2/357 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C  +   Y+ +I    + G    A  LF +M G  + PD   Y   I GLC   D +
Sbjct: 178 GKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDAD 237

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST-L 127
            A ++  +M + G +P  +T++ ++D L K G+MDEA RL D M+    +      +T L
Sbjct: 238 RALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATML 297

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           M G+CL G++ +A +LF  + S G    +V+Y +LI G       +E   L R+M+ +G+
Sbjct: 298 MHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGL 357

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
             +   +N +  GL    + + A+ L  E+  D    D  TY   I  LCK+  + EAV 
Sbjct: 358 LLSTYEFNLVIKGLLRDKRWKDAIGLL-ELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVN 416

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L+  +     +  I  Y+ L+ G C+ GR++ AL+L+  +P +    + VTY  ++ G  
Sbjct: 417 LWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYI 476

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
                D A+ L  +M +N V+     +  LI+G   +N+  +V E+L +   +  +P
Sbjct: 477 KKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVP 533



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 141/295 (47%), Gaps = 4/295 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GV C     TYN +I+GL     V +   +  +   E   P  +TYNS+I+G   A    
Sbjct: 495 GVSC--GDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMG 552

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD-VRPNAFTYSTL 127
            A  ++ +M  +G+ P++VT+   +D  C+    D A +LL + V+RD ++P+   Y+  
Sbjct: 553 SAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLL-IYVRRDGIQPDIAAYNAF 611

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D FC  G ++RA      +   G   D   YN  + GY   K + EA   Y  M+ + +
Sbjct: 612 IDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRV 671

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
                 Y TL  G  ++  V  AL+L+ EM  + V  D  T+     GLC++G I  A  
Sbjct: 672 VADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKR 731

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
           L   +  L    +I  YN LI+   + G+L+ A +L   +    +V D  TY+I+
Sbjct: 732 LLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 157/359 (43%), Gaps = 35/359 (9%)

Query: 39  FLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
           + +M    + PD  +   L+          +A  LF EM  +G       ++V++    +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
            G   +A RL D M    V+P+   Y+  + G C     +RA ++ G M   G +  +++
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH-QVEHALKLFEEM 217
           Y+ +++   K   ++EAL L  +M+    K   V   T+ +  + +H +V  AL LF+E+
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEV 317

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL-----------------GILK---- 256
             D V     TY   I G    G   E  +L R +                 G+L+    
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRW 377

Query: 257 ------CEL-------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
                  EL       D+  Y CLI  LCK  +L  A+ L+  +    +   +VTY+ ++
Sbjct: 378 KDAIGLLELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLL 437

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
            G C  G+MD+A  L+ +M +    PN + + TL+ G+++         LL++M++  V
Sbjct: 438 LGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGV 496



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 44/97 (45%)

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           AL LF  +  +   AD   Y+++I      G    A  LF +M    V P+  ++   I 
Sbjct: 169 ALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITIS 228

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           G  ++    + +++L KM+E    P     S VVD+L
Sbjct: 229 GLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVL 265


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 183/376 (48%), Gaps = 16/376 (4%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V   +    LC  G  +KA  +  +M G    PD  TY+ +I  LC+A+    A  LF
Sbjct: 453 NKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLF 512

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM   GV P V T+ +++D   K G + +A   LD MV+    P   TY+TL+  +   
Sbjct: 513 KEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKA 572

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK--------- 185
            K++ A ELF  M + GC  + ++Y  LI+GYCK+  +E+A  +Y  M            
Sbjct: 573 KKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMY 632

Query: 186 -------GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
                    KP VVTY  L  GL + H+V+ A  L E M  D    +T  Y+  IDG CK
Sbjct: 633 FKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCK 692

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
              + EA E+F  +       ++  Y+ LID L K  RL++ L++   +       ++V 
Sbjct: 693 AAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVI 752

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y  MI GL    + D+A+ L L MEE    PNV+ +  +I GF +  K  K +EL  +M 
Sbjct: 753 YTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMG 812

Query: 359 EKKVMPDASIVSMVVD 374
            K   P+    +++++
Sbjct: 813 SKGCAPNFVTYTVLIN 828



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 184/350 (52%), Gaps = 18/350 (5%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTY  ++DGLCK   V  A+ L   M  +   P+ + Y++LI G C A   +EA+ 
Sbjct: 642 KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQE 701

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +M++ G  P+V T++ ++D L K+ ++D   ++L  M++    PN   Y+ ++DG  
Sbjct: 702 VFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K + A +L   ME  GCK + V+Y  +I+G+ K  +V++ L L+REM SKG  P  V
Sbjct: 762 KVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFV 821

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L         ++ A  L EEM++       S+Y   I+G  +        E   +L
Sbjct: 822 TYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR--------EFILSL 873

Query: 253 GILKCELD-------IQAYNCLIDGLCKSGRLEIALELFRSL--PRRVLVADVVTYNIMI 303
           G+L+ E++       I  Y  LID   K+GRLE+ALEL + +      + A    Y  +I
Sbjct: 874 GLLE-EVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLI 932

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
           +      ++  A +LF DM  + V P++  FV L+ G +R+ +  + ++L
Sbjct: 933 YSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQL 982



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 185/391 (47%), Gaps = 56/391 (14%)

Query: 4   GNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH 63
           GNG +     P+T TY+ +I  LC    V+ A  LF +MKG  + PDV TY  LI     
Sbjct: 482 GNGFV-----PDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSK 536

Query: 64  ANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
           A    +A     EM+  G +P+VVT+  ++    K  K+  A+ L +LM+ +   PN  T
Sbjct: 537 AGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVIT 596

Query: 124 YSTLMDGFCLTGKINRAEELFGSME----------------SMGCKHDDVSYNILI---- 163
           Y+ L+DG+C +G I +A +++  M                 ++  K + V+Y  L+    
Sbjct: 597 YTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLC 656

Query: 164 -------------------------------NGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                                          +G+CK  +++EA  ++ +MV  G  P V 
Sbjct: 657 KAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVY 716

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY++L   LF+  +++  LK+  +M  +  A +   Y   IDGL K     EA +L   +
Sbjct: 717 TYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMM 776

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C+ ++  Y  +IDG  K+G+++  LELFR +  +    + VTY ++I+  C  G +
Sbjct: 777 EEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHL 836

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           D+A+ L  +M++     +V  +  +I G+ R
Sbjct: 837 DEAYALLEEMKQTYWPKHVSSYCKVIEGYKR 867



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 171/420 (40%), Gaps = 57/420 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNT+ YN +I GLC+  F ++A     +M+  +  P+V TY  L+ G  +       KR+
Sbjct: 306 PNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRI 365

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+ +G  PS   FN ++   CK+     A +LL  M + + +P    Y+ L+   C 
Sbjct: 366 LSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICS 425

Query: 134 T-----------------------------------------GKINRAEELFGSMESMGC 152
                                                     GK  +A ++   M   G 
Sbjct: 426 GGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGF 485

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
             D  +Y+ +I   C    VE A  L++EM   G+ P V TY  L     +   ++ A  
Sbjct: 486 VPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHN 545

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
             +EM RD       TY T I    K   +  A ELF  +    C  ++  Y  LIDG C
Sbjct: 546 WLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYC 605

Query: 273 KSGRLEIALELFRSLPRRVLVAD----------------VVTYNIMIHGLCNDGQMDKAH 316
           KSG +E A +++  +     + D                VVTY  ++ GLC   ++  A 
Sbjct: 606 KSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDAR 665

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           DL   M  +   PN I++  LI GF +  K  +  E+ HKM E    P+    S ++D L
Sbjct: 666 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRL 725



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 160/396 (40%), Gaps = 44/396 (11%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N +I   C+ G  + A     ++K     P  +TYN+L+     A+  + A+ +  EM +
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
            G+     T       LCK GK  EA   L L+ + D  PN   Y+ ++ G C       
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREA---LSLIEKEDFVPNTILYNKMISGLCEASFFEE 326

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A +    M S  C  +  +Y IL+ G    K++     +   M+++G  P+   +N+L  
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI----------------- 242
              +     +A KL ++M++ +       YN  I  +C  G +                 
Sbjct: 387 AYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEML 446

Query: 243 --------VEAVELFRTL-GILKCE---------------LDIQAYNCLIDGLCKSGRLE 278
                   V  V   R L G  K E                D   Y+ +I  LC + R+E
Sbjct: 447 SAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVE 506

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A  LF+ +    +V DV TY I+I      G + +AH+   +M  +   P V+ + TLI
Sbjct: 507 NAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLI 566

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           H +++  K S   EL   M  K   P+    + ++D
Sbjct: 567 HAYLKAKKVSVANELFELMIAKGCFPNVITYTALID 602



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 126/252 (50%), Gaps = 8/252 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN V Y  +IDGL K    D+A  L L M+ +   P+VVTY ++I G   A   ++  
Sbjct: 746 CAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCL 805

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM  +G  P+ VT+ V+++  C  G +DEA  LL+ M Q     +  +Y  +++G+
Sbjct: 806 ELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY 865

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +   +  L   +E  G     + Y +LI+ + K   +E AL L++E++S  +    
Sbjct: 866 --KREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAA 923

Query: 192 VT--YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
               Y +L        ++ HA +LF +M RD V  D  T+   + GL +     EA++L 
Sbjct: 924 KKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLS 983

Query: 250 RTLGILKCELDI 261
            +L    C++DI
Sbjct: 984 DSL----CQMDI 991



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 119/296 (40%), Gaps = 15/296 (5%)

Query: 90  NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
           NV++ + C+NG  + A   L  +     +P   TY+ L+  F    K++ A+ +   M  
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
           +G   D+ +        CK  +  EALSL  +   +   P  + YN +  GL E    E 
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEE 326

Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
           A+     M+      +  TY   + G      +     +   +    C      +N L+ 
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM---------DKAHDLFL 320
             CKS     A +L + + +       V YNI+I  +C+ G++         +KA++  L
Sbjct: 387 AYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEML 446

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                    NV+ F   + GF +  K  KVI   H+M     +PD S  S V+  L
Sbjct: 447 SAGTVLNKVNVVSFARCLCGFGKFEKAYKVI---HEMMGNGFVPDTSTYSEVIGFL 499


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 191/387 (49%), Gaps = 22/387 (5%)

Query: 12  CKPNTVTYNTIIDGLCKE------GFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           C P  V YN  I  +C +        +D A+ ++ +M   N   + V   +    LC   
Sbjct: 377 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 436

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            +++A +L  EMM +G  P   T++ ++  LC   K+++A  L   M    V P+ +TY+
Sbjct: 437 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 496

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+D FC  G I +A+ LF  M S+GC    V+Y  LI+ Y K K+V +A  ++  MV  
Sbjct: 497 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 556

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM----------------QRDDVAADTSTY 229
           G +P  VTY  L  GL +   +  A +++ ++                 R  +A +  TY
Sbjct: 557 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 616

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
              +DGLCK   +  A EL   +    CE +   Y+ LIDG CK+G+++ A E+F  + +
Sbjct: 617 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 676

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
              +  V TY  +I  +  DG++D A  +   M +++  PNV+ +  +I G  RI +  K
Sbjct: 677 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 736

Query: 350 VIELLHKMKEKKVMPDASIVSMVVDLL 376
            ++LL  M+EK   P+    + ++D L
Sbjct: 737 ALKLLSLMEEKGCSPNVVTYTALIDGL 763



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 152/283 (53%), Gaps = 18/283 (6%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +GV   P+  TY  +ID  CK G +++A+ LF +M+    +P VVTY +LIH    A   
Sbjct: 486 VGVT--PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 543

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV-------------- 113
            +A  +F  M+D G +P+ VT+  ++D LCK G + +A  +   ++              
Sbjct: 544 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC 603

Query: 114 --QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
             +  + PN  TY  L+DG C   K++ A EL  +M S GC+ + + Y+ LI+G+CK  +
Sbjct: 604 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 663

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           ++ A  ++ +M   G  P+V TY +L   +F+  +++ A+K+  +M +D    +  TY  
Sbjct: 664 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTA 723

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
            IDGLC+ G   +A++L   +    C  ++  Y  LIDGL +S
Sbjct: 724 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQS 766



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 178/419 (42%), Gaps = 57/419 (13%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +TV    +I GL +  + D+A +   +M+  +  P+VVTY +L+ G          KR
Sbjct: 273 KLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKR 332

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   MM +G  P+   FN ++   C       A +LL+ M      P    Y+  +   C
Sbjct: 333 IINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSIC 392

Query: 133 LTGK------INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
              K      ++ AE+++G M +  C  + V+        C   + ++A  L +EM+ KG
Sbjct: 393 GQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKG 452

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
             P   TY+ +   L    +VE A  LF+EM+   V  D  TY   ID  CK G I +A 
Sbjct: 453 FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQ 512

Query: 247 ELF---RTLGI--------------LKCELDIQA------------------YNCLIDGL 271
            LF   R++G               LK +   QA                  Y  L+DGL
Sbjct: 513 WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGL 572

Query: 272 CKSGRLEIALELFRSL----------------PRRVLVADVVTYNIMIHGLCNDGQMDKA 315
           CK+G +  A E++  L                 R  L  +VVTY  ++ GLC   ++D A
Sbjct: 573 CKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHA 632

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           H+L   M  +   PN I++  LI GF +  K     E+  +M +   +P     + ++D
Sbjct: 633 HELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLID 691



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 142/362 (39%), Gaps = 9/362 (2%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           Y+ + D L  +G    A+ L  ++  E+        N L+   C    WNEA      + 
Sbjct: 142 YDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLK 201

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           D G +PS VT+N ++  L   G++D   R+   M +     + FT        C  G+  
Sbjct: 202 DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 261

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A ++   +E    K D V    +I+G  +    +EA+S    M      P VVTY TL 
Sbjct: 262 DALDM---IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLL 318

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            G  +  Q+    ++   M  +    + S +N+ +   C       A +L   +    C 
Sbjct: 319 SGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCP 378

Query: 259 LDIQAYNCLIDGLCKSGRLEIA--LELFRSLPRRVLVADVVTYNIMI----HGLCNDGQM 312
                YN  I  +C   +L     L+L   +   +L A+ V   + +      LC  G+ 
Sbjct: 379 PGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 438

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           DKA  L  +M      P+   +  +I       K  K   L  +MK   V PD    +++
Sbjct: 439 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 498

Query: 373 VD 374
           +D
Sbjct: 499 ID 500


>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Cucumis sativus]
          Length = 868

 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 108/293 (36%), Positives = 167/293 (56%), Gaps = 3/293 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVD--KAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           KPN VTYN +ID  C +G V+  +   +F +M    + PD +TYNSL+        W  A
Sbjct: 254 KPNLVTYNAVIDA-CGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAA 312

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           + LF EM+D+G+   V T+N ++D +CK G+MD A  ++  M  + + PN  TYST+ DG
Sbjct: 313 RNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADG 372

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G++  A  L+  M+ +G   D VSYN L++ Y K    E+AL + +EM S G+K  
Sbjct: 373 YAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKD 432

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTYN L  G  +  +     ++F+EM++D V  +  TY+T ID   K     EA+E+FR
Sbjct: 433 VVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFR 492

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
                  + D+  Y+ LI+ LCK+G ++ A+ L   + +  +  +VVTYN +I
Sbjct: 493 EFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSII 545



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/332 (33%), Positives = 180/332 (54%), Gaps = 4/332 (1%)

Query: 15  NTV-TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN-DWNEAKR 72
           NTV  ++ +I    K G+ D+A  +F  MK   + P++VTYN++I        ++     
Sbjct: 220 NTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVE 279

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR-LLDLMVQRDVRPNAFTYSTLMDGF 131
           +F EM+  GVQP  +T+N ++  +C  G + EA+R L + M+ R +  + FTY+TL+D  
Sbjct: 280 IFEEMLRNGVQPDRITYNSLL-AVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAV 338

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+++ A E+   M       + V+Y+ + +GY K   +E+AL+LY EM   GI    
Sbjct: 339 CKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDR 398

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V+YNTL     ++ + E ALK+ +EM    V  D  TYN  +DG  K G   E   +F+ 
Sbjct: 399 VSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKE 458

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +   ++  Y+ LID   K    E A+E+FR   +  L ADVV Y+ +I+ LC +G 
Sbjct: 459 MKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGL 518

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           +D A  L  +M +  + PNV+ + ++I  F R
Sbjct: 519 VDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGR 550



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 161/309 (52%), Gaps = 3/309 (0%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           AK +F   + +G   +V  F+ ++    K+G  DEA ++ + M    ++PN  TY+ ++D
Sbjct: 206 AKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVID 265

Query: 130 GFCLTGKI--NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
             C  G +   R  E+F  M   G + D ++YN L+    +    E A +L+ EM+ +GI
Sbjct: 266 A-CGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGI 324

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
              V TYNTL   + +  Q++ A ++  EM    +  +  TY+T  DG  K G + +A+ 
Sbjct: 325 DQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALN 384

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L+  +  L   LD  +YN L+    K GR E AL++ + +    +  DVVTYN ++ G  
Sbjct: 385 LYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYG 444

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G+ ++   +F +M+++ V PN++ + TLI  + + +   + +E+  + K+  +  D  
Sbjct: 445 KQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVV 504

Query: 368 IVSMVVDLL 376
           + S +++ L
Sbjct: 505 LYSELINAL 513



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 140/302 (46%), Gaps = 38/302 (12%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G  GV  K + VTYN ++DG  K+G  ++   +F +MK + + P+++TY++LI      +
Sbjct: 425 GSSGV--KKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGS 482

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            + EA  +F E    G++  VV ++ +++ LCKNG +D A  LLD M +  +RPN  TY+
Sbjct: 483 LYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYN 542

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN---------------- 169
           +++D F   G+   AE L   + +   +  +    +LI G  ++                
Sbjct: 543 SIIDAF---GRSTTAEFLVDGVGASNERQSESPTFMLIEGVDESEINWDDGHVFKFYQQL 599

Query: 170 ---------------KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
                          +E+   LS++++M    IKP VVT++ +         +E A  L 
Sbjct: 600 VSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLL 659

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
           EE++  D       +   + G  +N +I +A  LF  +  +        YN L D L   
Sbjct: 660 EELRLFDNQVYGVAHGLLM-GFSENVWI-QAQYLFDEVKQMDSSTASAFYNALTDMLWHF 717

Query: 275 GR 276
           G+
Sbjct: 718 GQ 719


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 132/423 (31%), Positives = 201/423 (47%), Gaps = 61/423 (14%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V YNT++   C+E   ++A+ L  +M    + PDVVT+NS I  LC A    EA R+F
Sbjct: 218 NRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIF 277

Query: 75  FEM-MDQGV---QPSVVTFNVIMDELCK-------------------------------- 98
            +M MD  +   +P+VVTFN+++   CK                                
Sbjct: 278 RDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMG 337

Query: 99  ---NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHD 155
              NG++ EA  +LD MV + + PNA+TY+ +MDG C    ++ A  L   M   G   D
Sbjct: 338 LLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPD 397

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
            V+Y+ L++GYC   +V EA S+  EM+  G +P   T NTL   L++  +   A ++ +
Sbjct: 398 TVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQ 457

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL-----------------FRTL-----G 253
           +M       DT T N  ++GLC+NG + +A E+                 F +L      
Sbjct: 458 KMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHN 517

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +  C  D   Y  LI+GLCK GRLE A + F  +  + L  D VTY+  I   C  G++ 
Sbjct: 518 VSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKIS 577

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  +  DME N  +  +  +  LI G    N+  ++  L  +MKEK + PD    + ++
Sbjct: 578 SAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNII 637

Query: 374 DLL 376
             L
Sbjct: 638 TCL 640



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 187/381 (49%), Gaps = 27/381 (7%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T   ++ GLC+ G V +A  L        I   VV YN+L+   C     NEA+
Sbjct: 181 CCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRIANRVV-YNTLVSRFCREEMNNEAE 239

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDV---RPNAFTYSTL 127
           RL   M + GV P VVTFN  +  LC+ GK+ EASR+  D+ +  ++   RPN  T++ +
Sbjct: 240 RLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLM 299

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + GFC  G +  A  L  +M+ +G       YNI + G  +N E+ EA  +  EMV+KGI
Sbjct: 300 LKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGI 359

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P   TYN +  GL   H +  A  L + M R+ V  DT  Y+T + G C  G + EA  
Sbjct: 360 EPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKS 419

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +   +    C+ +    N L+  L K GR   A E+ + +  +    D VT NI+++GLC
Sbjct: 420 VLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLC 479

Query: 308 NDGQMDKAHDLFLDMEENAVA----------------------PNVIIFVTLIHGFVRIN 345
            +G++DKA ++  +M  N                         P+ I + TLI+G  ++ 
Sbjct: 480 RNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVG 539

Query: 346 KPSKVIELLHKMKEKKVMPDA 366
           +  +  +   +M  K + PD+
Sbjct: 540 RLEEAKKKFIEMLAKNLRPDS 560



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 192/391 (49%), Gaps = 23/391 (5%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           + E+G+  +PN VT+N ++ G CK G +  A+ L   MK       +  YN  + GL   
Sbjct: 283 DAELGLP-RPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRN 341

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
            +  EA+ +  EM+ +G++P+  T+N++MD LC+N  + +A  L+DLM++  V P+   Y
Sbjct: 342 GELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAY 401

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           STL+ G+C  GK+  A+ +   M   GC+ +  + N L++   K     EA  + ++M  
Sbjct: 402 STLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNE 461

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAA-------------------- 224
           K  +P  VT N +  GL    +++ A ++  EM  +   +                    
Sbjct: 462 KCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNC 521

Query: 225 --DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
             D  TY T I+GLCK G + EA + F  +       D   Y+  I   CK G++  A  
Sbjct: 522 LPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFR 581

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           + + + R      + TYN +I GL ++ Q+ + + L  +M+E  ++P++  +  +I    
Sbjct: 582 VLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLC 641

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
              K    I LLH+M +K + P+ S   +++
Sbjct: 642 EGGKAKDAISLLHEMLDKGISPNVSSFKILI 672



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 169/370 (45%), Gaps = 23/370 (6%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PNT T NT++  L KEG   +A+ +  +M  +   PD VT N +++GLC   + ++A 
Sbjct: 429 CQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKAS 488

Query: 72  RLFFEMMDQGVQ----------------------PSVVTFNVIMDELCKNGKMDEASRLL 109
            +  EM   G                        P  +T+  +++ LCK G+++EA +  
Sbjct: 489 EIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKF 548

Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
             M+ +++RP++ TY T +  FC  GKI+ A  +   ME  GC     +YN LI G   N
Sbjct: 549 IEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSN 608

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
            ++ E   L  EM  KGI P + TYN +   L E  + + A+ L  EM    ++ + S++
Sbjct: 609 NQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSF 668

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
              I    K+     A ELF  + +  C      Y+ + + L   G+L  A ELF     
Sbjct: 669 KILIKAFSKSSDFKVACELFE-VALNICGRKEALYSLMFNELLAGGQLSEAKELFEVSLD 727

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
           R L      Y  +I  LC D ++  A+ L   + +     +   F+ +I G  +     +
Sbjct: 728 RYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQ 787

Query: 350 VIELLHKMKE 359
             EL  +M E
Sbjct: 788 ADELAKRMME 797



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 179/371 (48%), Gaps = 13/371 (3%)

Query: 14  PNTVTYNTIIDGLCKE---GFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           P+   YN ++    +    GFV     L+  M    + P   T+N LIH LC +  ++ A
Sbjct: 113 PSLPLYNLLLRSTLRHHRPGFVS---WLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHA 169

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR-PNAFTYSTLMD 129
            +LF +M  +G  P+  T  +++  LC+ G + +A  L++       R  N   Y+TL+ 
Sbjct: 170 LQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVN--NNNSCRIANRVVYNTLVS 227

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM---VSKG 186
            FC     N AE L   M  +G   D V++N  I+  C+  +V EA  ++R+M      G
Sbjct: 228 RFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELG 287

Query: 187 I-KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           + +P VVT+N +  G  +   +  A  L E M++         YN ++ GL +NG ++EA
Sbjct: 288 LPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEA 347

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             +   +     E +   YN ++DGLC++  L  A  L   + R  +  D V Y+ ++HG
Sbjct: 348 RLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHG 407

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            C+ G++ +A  +  +M  N   PN     TL+H   +  +  +  E+L KM EK   PD
Sbjct: 408 YCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPD 467

Query: 366 ASIVSMVVDLL 376
               ++VV+ L
Sbjct: 468 TVTCNIVVNGL 478



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 142/340 (41%), Gaps = 97/340 (28%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQM---------KG-------------ENINPD 50
           +P+TVT N +++GLC+ G +DKA  +  +M         KG              N  PD
Sbjct: 465 QPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPD 524

Query: 51  VVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD 110
            +TY +LI+GLC      EAK+ F EM+ + ++P  VT++  +   CK GK+  A R+L 
Sbjct: 525 GITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLK 584

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFG---SMESMGCKHDDVSYNILINGYC 167
            M +        TY+ L+ G    G  N+  E++G    M+  G   D  +YN +I   C
Sbjct: 585 DMERNGCSKTLQTYNALILGL---GSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLC 641

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG------------LFEIH---------- 205
           +  + ++A+SL  EM+ KGI P V ++  L               LFE+           
Sbjct: 642 EGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEAL 701

Query: 206 ------------QVEHALKLFEE-----------MQRDDVAA------------------ 224
                       Q+  A +LFE            M +D +A                   
Sbjct: 702 YSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLI 761

Query: 225 ------DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
                 D +++   IDGL K G   +A EL + +  L+ E
Sbjct: 762 DKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMMELELE 801



 Score = 41.2 bits (95), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 2/117 (1%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +C      Y+ + + L   G + +AK LF       +      Y  LI  LC      +A
Sbjct: 694 ICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADA 753

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV--RPNAFTYS 125
             L ++++D+G      +F  ++D L K G   +A  L   M++ ++  RP   TYS
Sbjct: 754 NSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMMELELEDRPVDRTYS 810


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 189/362 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY  +ID LC    +D AK +F +MK     PD VTY +L+       D +   
Sbjct: 291 CGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVN 350

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           + + EM   G  P VVTF +++D LCK G   EA   LD+M  + + PN  TY+TL+ G 
Sbjct: 351 QFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGL 410

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +++ A E+F +MES+G K    +Y + I+ Y K+ +   AL  + +M +KGI P +
Sbjct: 411 LRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNI 470

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V  N     L +  +   A ++F  ++   +  D+ TYN  +    K G I EA++L   
Sbjct: 471 VACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSE 530

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    CE D+   N LI+ L K+ R++ A ++F  +    L   VVTYN ++ GL  +G+
Sbjct: 531 MVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK 590

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           + +A +LF  M +    PN I F TL     + ++ +  +++L KM +   +PD    + 
Sbjct: 591 IQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNT 650

Query: 372 VV 373
           ++
Sbjct: 651 II 652



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 181/352 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  TY++++ GL K   ++    L  +M+   + P+V T+   I  L  A   NEA  
Sbjct: 222 RPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYE 281

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M D+G  P VVT+ V++D LC   K+D A  +   M     +P+  TY TL+D F 
Sbjct: 282 ILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFS 341

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               ++   + +  ME  G   D V++ IL++  CK     EA +    M  +GI P + 
Sbjct: 342 DNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLH 401

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYNTL  GL  +H+++ AL++F+ M+   V     TY  FID   K+G  V A+E F  +
Sbjct: 402 TYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM 461

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +I A N  +  L K+GR   A ++F  L    LV D VTYN+M+      G++
Sbjct: 462 KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 521

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           D+A  L  +M EN   P+VI+  +LI+   + ++  +  ++  +MKE K+ P
Sbjct: 522 DEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 573



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 177/330 (53%), Gaps = 10/330 (3%)

Query: 7    EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
            ++GV  +P   TYN +I GL +   ++ A+ +FLQ+K     PDV TYN L+     +  
Sbjct: 780  DLGV--QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGK 837

Query: 67   WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDVRPNAFTYS 125
             +E   ++ EM     +P+ +T N+++  L K G +D+A  L  DLM  RD  P A TY 
Sbjct: 838  IDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG 897

Query: 126  TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
             L+DG   +G++  A++LF  M   GC+ +   YNILING+ K  E + A +L++ MV +
Sbjct: 898  PLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 957

Query: 186  GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            G++P + TY+ L   L  + +V+  L  F E++   +  D   YN  I+GL K   + EA
Sbjct: 958  GVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEA 1017

Query: 246  VELF----RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
            + LF    ++ GI     D+  YN LI  L  +G +E A +++  + R  L  +V T+N 
Sbjct: 1018 LVLFNEMKKSRGITP---DLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNA 1074

Query: 302  MIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
            +I G    G+ + A+ ++  M     +PN 
Sbjct: 1075 LIRGYSLSGKPEHAYAVYQTMVTGGFSPNT 1104



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 175/330 (53%), Gaps = 1/330 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VT+  ++D LCK G   +A A    M+ + I P++ TYN+LI GL   +  ++A  +
Sbjct: 363 PDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEI 422

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   GV+P+  T+ V +D   K+G    A    + M  + + PN    +  +     
Sbjct: 423 FDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK 482

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A+++F  ++ +G   D V+YN+++  Y K  E++EA+ L  EMV    +P V+ 
Sbjct: 483 AGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIV 542

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            N+L   L++  +V+ A K+F  M+   +     TYNT + GL KNG I EA+ELF  + 
Sbjct: 543 VNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV 602

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  +   +N L D LCK+  + +AL++   +     V DV TYN +I GL  +GQ+ 
Sbjct: 603 QKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVK 662

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           +A   F  M++  V P+ +   TL+ G V+
Sbjct: 663 EAMCFFHQMKK-LVYPDFVTLCTLLPGVVK 691



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 192/403 (47%), Gaps = 40/403 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VTYNT++ GL K G + +A  LF  M  +   P+ +T+N+L   LC  ++   A +
Sbjct: 572 KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALK 631

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           + F+MMD G  P V T+N I+  L KNG++ EA      M ++ V P+  T  TL+ G  
Sbjct: 632 MLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVV 690

Query: 133 LTGKINRA--------------------EELFGSMESMGCKHDDVSYN--ILINGYC--- 167
             G I  A                    E+L GS+ +     + VS++  ++ NG C   
Sbjct: 691 KAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDG 750

Query: 168 ------------KNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
                       K+     A  L+ +     G++P + TYN L  GL E   +E A  +F
Sbjct: 751 DSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF 810

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
            +++      D +TYN  +D   K+G I E  E+++ +   +CE +   +N +I GL K+
Sbjct: 811 LQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKA 870

Query: 275 GRLEIALELFRSL-PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           G ++ AL+L+  L   R       TY  +I GL   G++ +A  LF  M +    PN  I
Sbjct: 871 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAI 930

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +  LI+GF +  +      L  +M ++ V PD    S++VD L
Sbjct: 931 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 973



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 207/395 (52%), Gaps = 43/395 (10%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            C P+  TYNTII GL K G V +A   F QMK + + PD VT  +L+ G+  A    +A 
Sbjct: 641  CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKAGLIEDAY 699

Query: 72   R---------------LFFE------MMDQGVQPSVVTFN--VIMDELCKNG-------- 100
            +               LF+E      + + G+  + V+F+  ++ + +C++G        
Sbjct: 700  KIIANFLYSCADQPANLFWEDLMGSILAEAGID-NAVSFSERLVANGICRDGDSILVPII 758

Query: 101  ----KMDEAS--RLLDLMVQRD--VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
                K + AS  R+L     +D  V+P   TY+ L+ G      I  A+++F  +++ GC
Sbjct: 759  RYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGC 818

Query: 153  KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
              D  +YN L++ Y K+ +++E   +Y+EM +   +P  +T+N +  GL +   V+ AL 
Sbjct: 819  IPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALD 878

Query: 213  LFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            L+ ++  D D +    TY   IDGL K+G + EA +LF  +    C  +   YN LI+G 
Sbjct: 879  LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGF 938

Query: 272  CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
             K+G  + A  LF+ + +  +  D+ TY++++  LC  G++D+    F +++E+ + P+V
Sbjct: 939  GKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDV 998

Query: 332  IIFVTLIHGFVRINKPSKVIELLHKMKEKK-VMPD 365
            + +  +I+G  + ++  + + L ++MK+ + + PD
Sbjct: 999  VCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPD 1033



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 167/359 (46%), Gaps = 3/359 (0%)

Query: 11   VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNE 69
            +C+        II    K      A+ LF +  K   + P + TYN LI GL  A+    
Sbjct: 746  ICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEI 805

Query: 70   AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
            A+ +F ++ + G  P V T+N ++D   K+GK+DE   +   M   +  PN  T++ ++ 
Sbjct: 806  AQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVIS 865

Query: 130  GFCLTGKINRAEELFGS-MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G    G ++ A +L+   M          +Y  LI+G  K+  + EA  L+  M   G +
Sbjct: 866  GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCR 925

Query: 189  PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
            P    YN L  G  +  + + A  LF+ M ++ V  D  TY+  +D LC  G + E +  
Sbjct: 926  PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 985

Query: 249  FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR-RVLVADVVTYNIMIHGLC 307
            FR L       D+  YN +I+GL K  RLE AL LF  + + R +  D+ TYN +I  L 
Sbjct: 986  FRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLG 1045

Query: 308  NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
              G +++A  ++ +++   + PNV  F  LI G+    KP     +   M      P+ 
Sbjct: 1046 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNT 1104



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 178/362 (49%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  +YN +I  L K  F  +A  ++ +M  +   P + TY+SL+ GL    D      L 
Sbjct: 189 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLL 248

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM   G++P+V TF + +  L + GK++EA  +L  M      P+  TY+ L+D  C  
Sbjct: 249 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 308

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            K++ A+E+F  M++   K D V+Y  L++ +  N++++     + EM   G  P VVT+
Sbjct: 309 RKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTF 368

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L   L +      A    + M+   +  +  TYNT I GL +   + +A+E+F  +  
Sbjct: 369 TILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMES 428

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L  +     Y   ID   KSG    ALE F  +  + +  ++V  N  ++ L   G+  +
Sbjct: 429 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 488

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  +F  +++  + P+ + +  ++  + ++ +  + I+LL +M E    PD  +V+ +++
Sbjct: 489 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLIN 548

Query: 375 LL 376
            L
Sbjct: 549 TL 550



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 179/366 (48%), Gaps = 6/366 (1%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           + K +T TY TI   L  +G + +A     +M+      +  +YN LIH L  +    EA
Sbjct: 150 IIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEA 209

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             ++  M+  G +PS+ T++ +M  L K   ++    LL  M    ++PN +T++  +  
Sbjct: 210 MEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRV 269

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               GKIN A E+   M+  GC  D V+Y +LI+  C  ++++ A  ++ +M +   KP 
Sbjct: 270 LGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPD 329

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA---VE 247
            VTY TL     +   ++   + + EM++D    D  T+   +D LCK G   EA   ++
Sbjct: 330 RVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLD 389

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           + R  GIL    ++  YN LI GL +  RL+ ALE+F ++    +     TY + I    
Sbjct: 390 VMRDQGILP---NLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYG 446

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G    A + F  M+   +APN++     ++   +  +  +  ++ + +K+  ++PD+ 
Sbjct: 447 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 506

Query: 368 IVSMVV 373
             +M++
Sbjct: 507 TYNMMM 512



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 187/408 (45%), Gaps = 52/408 (12%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+ +  N++I+ L K   VD+A  +F++MK   + P VVTYN+L+ GL       EA 
Sbjct: 536 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAI 595

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF  M+ +G  P+ +TFN + D LCKN ++  A ++L  M+     P+ FTY+T++ G 
Sbjct: 596 ELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL 655

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE----------------- 174
              G++  A   F  M+ +    D V+   L+ G  K   +E+                 
Sbjct: 656 VKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPA 714

Query: 175 -------------------ALSLYREMVSKGIKP-------TVVTYNTLFLGLFEIHQVE 208
                              A+S    +V+ GI          ++ Y+      F+ +   
Sbjct: 715 NLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYS------FKHNNAS 768

Query: 209 HALKLFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
            A  LFE+  +D  V     TYN  I GL +   I  A ++F  +    C  D+  YN L
Sbjct: 769 GARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFL 828

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD-MEENA 326
           +D   KSG+++   E+++ +       + +T+NI+I GL   G +D A DL+ D M +  
Sbjct: 829 LDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 888

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +P    +  LI G  +  +  +  +L   M +    P+ +I +++++
Sbjct: 889 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILIN 936



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 120/255 (47%), Gaps = 37/255 (14%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQ-MKGENINPDVVTYNSLIHGLCHANDWNEA 70
            C+PNT+T+N +I GL K G VD A  L+   M   + +P   TY  LI GL  +    EA
Sbjct: 853  CEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA 912

Query: 71   KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            K+LF  M D G +P+   +N++++   K G+ D A  L   MV+  VRP+  TYS L+D 
Sbjct: 913  KQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDC 972

Query: 131  FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK----- 185
             C+ G+++     F  ++  G   D V YN++ING  K   +EEAL L+ EM        
Sbjct: 973  LCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITP 1032

Query: 186  -------------------------------GIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
                                           G++P V T+N L  G     + EHA  ++
Sbjct: 1033 DLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVY 1092

Query: 215  EEMQRDDVAADTSTY 229
            + M     + +T TY
Sbjct: 1093 QTMVTGGFSPNTGTY 1107



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 150/322 (46%), Gaps = 35/322 (10%)

Query: 88  TFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM 147
           T N +++ L  +GK++E + + DLM +R ++ +  TY T+     + G + +A      M
Sbjct: 122 TCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKM 181

Query: 148 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 207
              G   +  SYN LI+   K++   EA+ +YR M+  G +P++ TY++L +GL +   +
Sbjct: 182 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDI 241

Query: 208 EHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
           E  + L +EM+   +  +  T+   I  L + G I EA E+ + +    C  D+  Y  L
Sbjct: 242 ESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 301

Query: 268 IDGLCKSGRLEIALELF------RSLPRRVL----------------------------- 292
           ID LC + +L+ A E+F      R  P RV                              
Sbjct: 302 IDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGH 361

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
           V DVVT+ I++  LC  G   +A      M +  + PN+  + TLI G +R+++    +E
Sbjct: 362 VPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 421

Query: 353 LLHKMKEKKVMPDASIVSMVVD 374
           +   M+   V P A    + +D
Sbjct: 422 IFDNMESLGVKPTAYTYIVFID 443



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 105/187 (56%), Gaps = 1/187 (0%)

Query: 12   CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
            C+PN   YN +I+G  K G  D A ALF +M  E + PD+ TY+ L+  LC     +E  
Sbjct: 924  CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 983

Query: 72   RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ-RDVRPNAFTYSTLMDG 130
              F E+ + G+ P VV +N+I++ L K  +++EA  L + M + R + P+ +TY++L+  
Sbjct: 984  HYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILN 1043

Query: 131  FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
              + G +  A +++  ++  G + +  ++N LI GY  + + E A ++Y+ MV+ G  P 
Sbjct: 1044 LGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1103

Query: 191  VVTYNTL 197
              TY  L
Sbjct: 1104 TGTYEQL 1110



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 87/153 (56%), Gaps = 1/153 (0%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            +P+  TY+ ++D LC  G VD+    F ++K   +NPDVV YN +I+GL   +   EA  
Sbjct: 960  RPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALV 1019

Query: 73   LFFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM   +G+ P + T+N ++  L   G ++EA ++ + + +  + PN FT++ L+ G+
Sbjct: 1020 LFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1079

Query: 132  CLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
             L+GK   A  ++ +M + G   +  +Y  L N
Sbjct: 1080 SLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1112



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 84/187 (44%)

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           T  T N +   L    ++E    +F+ MQ+  +  DT+TY T    L   G + +A    
Sbjct: 119 TTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFAL 178

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           R +      L+  +YN LI  L KS     A+E++R +        + TY+ ++ GL   
Sbjct: 179 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKR 238

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
             ++    L  +ME   + PNV  F   I    R  K ++  E+L +M ++   PD    
Sbjct: 239 RDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 298

Query: 370 SMVVDLL 376
           ++++D L
Sbjct: 299 TVLIDAL 305


>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
 gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
          Length = 614

 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 176/340 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    +N ++  + + G +  A+ +F +M    + P VVT+N+L+ G+C A+D N A  L
Sbjct: 242 PEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANAL 301

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   GV P V T+   M  LCK G++ +A  + + M +R V PN   ++TL+D  C 
Sbjct: 302 RGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCK 361

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +    EL   M + G K D V+YN L NG C+ ++++ A  +  EM + G+KP  VT
Sbjct: 362 EGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVT 421

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G  +  +++ A+++ +EM  + VA D  TY T I GL K+G  V++  +   + 
Sbjct: 422 YTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMM 481

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E D   Y  +ID  CK+  ++   +L + +  +     VVTYN++++G C  GQM 
Sbjct: 482 EAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMK 541

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            A  L   M    V P+ I +  L+ G  +  K     EL
Sbjct: 542 NADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEEL 581



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 172/343 (50%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           V +A A +LQ+    + P+   +N L+  +  +     A+ +F EM+ +GV P+VVTFN 
Sbjct: 225 VPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNT 284

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +M  +CK   ++ A+ L  LM +  V P+ +TY   M G C  G+I  A E+F  M   G
Sbjct: 285 LMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERG 344

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
              + V +  LI+ +CK   V   L L+REM ++GIK  +V YN L  GL  +  ++ A 
Sbjct: 345 VNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAAN 404

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            + EEM+ + +  D  TY T IDG CK G +  A+E+ + +      LD   Y  LI GL
Sbjct: 405 DIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGL 464

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
            KSGR   +  +   +    L  D  TY ++I   C +  +     L  +M+     P V
Sbjct: 465 SKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGV 524

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + +  +++GF  + +      LL+ M    V PD    ++++D
Sbjct: 525 VTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLD 567



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 137/260 (52%), Gaps = 3/260 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNTV + T+ID  CKEG V     L  +M    I  D+V YN+L +GLC   D   A  +
Sbjct: 347 PNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDI 406

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM + G++P  VT+  ++D  CK G++D A  +   M    V  +  TY+TL+ G   
Sbjct: 407 VEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSK 466

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G+   +E +   M   G + D+ +Y ++I+ +CKN +V+    L +EM +KG KP VVT
Sbjct: 467 SGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVT 526

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +  G   + Q+++A  L   M    V  D  TYN  +DG CK+G + +A EL    G
Sbjct: 527 YNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEELKSAKG 586

Query: 254 ILKCELDIQAYNCLIDGLCK 273
           ++    D   Y  LI+   K
Sbjct: 587 MVS---DFGLYTSLINEFVK 603



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 108/174 (62%), Gaps = 2/174 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+ VTY T+IDG CKEG +D A  +  +M  E +  D VTY +LI GL  +    +++R
Sbjct: 416 KPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSER 475

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EMM+ G++P   T+ +++D  CKN  +    +LL  M  +  +P   TY+ +M+GFC
Sbjct: 476 ILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFC 535

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA--LSLYREMVS 184
           + G++  A+ L  +M ++G   DD++YNIL++G+CK+ +V +A  L   + MVS
Sbjct: 536 ILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEELKSAKGMVS 589


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 195/401 (48%), Gaps = 41/401 (10%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GVV  P+  TYN +IDG CK G +  A  +   M+    NPD  TYNSLI+GLC     +
Sbjct: 314 GVV--PSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLD 370

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL----------LDL------- 111
           EA+ L    + +G  P+V+TF  +++  CK  ++D+A R+          LDL       
Sbjct: 371 EAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLI 430

Query: 112 ------------------MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCK 153
                             M    + PN  TY++++DG+C  G +  A E+F  ME  GC 
Sbjct: 431 NVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCH 490

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            +  +Y  LI G  ++K++ +A++L  +M   GI P V+TY TL  G  + H+ ++A +L
Sbjct: 491 PNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRL 550

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
           FE M+++ +  D   YN   D LCK+G   EA       G++   L    Y  L+DG  K
Sbjct: 551 FEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVV---LTKVTYTSLVDGFSK 607

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           +G  + A  L   +      AD+ TY++++  LC   ++++A  +   M  + V  N++ 
Sbjct: 608 AGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVA 667

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +  +I   ++  K      L ++M      P A+  ++ + 
Sbjct: 668 YTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFIS 708



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 182/362 (50%), Gaps = 1/362 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +T T N ++ G C+   + KA  L + M       +  +Y  LI GLC A    EA  L 
Sbjct: 213 DTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLV 272

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
           F M+  G   ++ T+ +++  LCK G++ +A  LLD M  R V P+ +TY+ ++DG+C +
Sbjct: 273 FMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKS 332

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G++  A  +   ME  GC  DD +YN LI G C  K ++EA  L    +++G  PTV+T+
Sbjct: 333 GRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGK-LDEAEELLNGAIARGFTPTVITF 391

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L  G  +  +++ AL++   M   +   D   Y   I+ L K   + EA E    +  
Sbjct: 392 TNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFA 451

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                ++  Y  +IDG CK G +  ALE+F+ +       +  TY  +I+GL  D ++ K
Sbjct: 452 NGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHK 511

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  L   M+E+ + P VI + TLI G  + ++      L   M++  + PD    +++ D
Sbjct: 512 AMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTD 571

Query: 375 LL 376
            L
Sbjct: 572 AL 573



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 186/406 (45%), Gaps = 56/406 (13%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TY ++I GL ++  + KA AL  +M+ + I P V+TY +LI G C  ++++ A 
Sbjct: 489 CHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAF 548

Query: 72  RLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           RLF EMM+Q G+ P    +NV+ D LCK+G+ +EA   L   V++ V     TY++L+DG
Sbjct: 549 RLF-EMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDG 604

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS------------- 177
           F   G  + A  L   M + GCK D  +Y++L+   CK K++ EALS             
Sbjct: 605 FSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCN 664

Query: 178 ----------------------LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
                                 L+ EM+S G KP+  TY        +I ++E A  L  
Sbjct: 665 IVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIG 724

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLI------- 268
           EM+RD V  D  TYN FI+G    GYI  A    + +    CE +   Y  L+       
Sbjct: 725 EMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMS 784

Query: 269 ---------DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
                     G+     L +  +L   + +  L   VVTY+ +I G C   ++++A  L 
Sbjct: 785 LINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLL 844

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             M    ++PN  I+  LI     I    K +  +  M E    P 
Sbjct: 845 DHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQ 890



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 183/361 (50%), Gaps = 3/361 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N  +Y  +I GLC+   V +A  L   M  +  + ++ TY  LI GLC     ++A+
Sbjct: 245 CRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDAR 304

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM  +GV PSV T+N ++D  CK+G+M +A  +  LM Q    P+ +TY++L+ G 
Sbjct: 305 GLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGL 364

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK++ AEEL     + G     +++  LINGYCK + +++AL +   M+S   K  +
Sbjct: 365 C-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDL 423

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y  L   L +  +++ A +   EM  + +A +  TY + IDG CK G +  A+E+F+ 
Sbjct: 424 QAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKL 483

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  +   Y  LI GL +  +L  A+ L   +    +   V+TY  +I G C   +
Sbjct: 484 MEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 543

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D A  LF  ME+N + P+   +  L     +  +  +    L  +++  V+   +  S+
Sbjct: 544 FDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL--VRKGVVLTKVTYTSL 601

Query: 372 V 372
           V
Sbjct: 602 V 602



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 173/351 (49%), Gaps = 1/351 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+TVTYNT+I   CK+G +  A   F  ++   +  D  T N+L+ G C  +D  +A  L
Sbjct: 177 PDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWL 236

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   G + +  ++ +++  LC+   + EA  L+ +MV      N  TY+ L+ G C 
Sbjct: 237 LMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCK 296

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+I+ A  L   M   G      +YN +I+GYCK+  +++AL +   M   G  P   T
Sbjct: 297 EGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWT 356

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L  GL    +++ A +L              T+   I+G CK   I +A+ +   + 
Sbjct: 357 YNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C+LD+QAY  LI+ L K  RL+ A E    +    L  +VVTY  +I G C  G + 
Sbjct: 416 SSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVG 475

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            A ++F  ME     PN   + +LI+G ++  K  K + L+ KM+E  + P
Sbjct: 476 AALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITP 526



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 162/361 (44%), Gaps = 3/361 (0%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           NG I     P  +T+  +I+G CK   +D A  +   M   N   D+  Y  LI+ L   
Sbjct: 377 NGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKK 436

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
               EAK    EM   G+ P+VVT+  I+D  CK G +  A  +  LM      PNA+TY
Sbjct: 437 CRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTY 496

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
            +L+ G     K+++A  L   M+  G     ++Y  LI G CK  E + A  L+  M  
Sbjct: 497 GSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQ 556

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
            G+ P    YN L   L +  + E A   +  + R  V     TY + +DG  K G    
Sbjct: 557 NGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDF 613

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A  L   +    C+ D+  Y+ L+  LCK  +L  AL +   +    +  ++V Y I+I 
Sbjct: 614 AAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIIS 673

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            +  +G+ D A  LF +M  +   P+   +   I  + +I +  +   L+ +M+   V P
Sbjct: 674 EMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTP 733

Query: 365 D 365
           D
Sbjct: 734 D 734



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 169/354 (47%), Gaps = 3/354 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CK +   Y  +I+ L K+  + +AK    +M    + P+VVTY S+I G C       A 
Sbjct: 419 CKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAAL 478

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M  +G  P+  T+  ++  L ++ K+ +A  L+  M +  + P   TY+TL+ G 
Sbjct: 479 EVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQ 538

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   + + A  LF  ME  G   D+ +YN+L +  CK+   EEA S    +V KG+  T 
Sbjct: 539 CKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTK 595

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY +L  G  +    + A  L E+M  +   AD  TY+  +  LCK   + EA+ +   
Sbjct: 596 VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQ 655

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +   + +I AY  +I  + K G+ + A  LF  +          TY + I   C  G+
Sbjct: 656 MTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGR 715

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +++A  L  +ME + V P+V+ +   I+G   +    +    L +M +    P+
Sbjct: 716 IEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPN 769



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 164/374 (43%), Gaps = 16/374 (4%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTY +++DG  K G  D A  L  +M  E    D+ TY+ L+  LC     NEA  +  +
Sbjct: 596 VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQ 655

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M   GV+ ++V + +I+ E+ K GK D A  L + M+    +P+A TY+  +  +C  G+
Sbjct: 656 MTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGR 715

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           I  AE L G ME  G   D V+YNI ING      ++ A S  + MV    +P   TY  
Sbjct: 716 IEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWL 775

Query: 197 LF-----LGLFEIHQVEHA-----------LKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           L      + L   H V+ +            +L E M +  +     TY++ I G CK  
Sbjct: 776 LLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKAT 835

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            + EA  L   +       + + Y  LI   C       A+     +        + +Y+
Sbjct: 836 RLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYH 895

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +I GLC++G  D+A  LF D+       N + +  L  G ++        +LL  M  +
Sbjct: 896 YLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNR 955

Query: 361 KVMPDASIVSMVVD 374
               D+   SM+ D
Sbjct: 956 HCRIDSESYSMLTD 969



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 153/330 (46%), Gaps = 36/330 (10%)

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L+  ++ +G+ P  VT+N ++   CK G +  A R   L+ +  ++ + +T + L+ G+
Sbjct: 165 KLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGY 224

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C T  + +A  L   M  MGC+ ++ SY ILI G C+ + V EAL L   MV  G    +
Sbjct: 225 CRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNL 284

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY  L  GL +  ++  A  L +EM    V     TYN  IDG CK+G + +A+ +   
Sbjct: 285 HTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKAL 344

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  D   YN LI GLC  G+L+ A EL      R     V+T+  +I+G C   +
Sbjct: 345 MEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAER 403

Query: 312 MD-----------------------------------KAHDLFLDMEENAVAPNVIIFVT 336
           +D                                   +A +   +M  N +APNV+ + +
Sbjct: 404 IDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTS 463

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +I G+ ++      +E+   M+ +   P+A
Sbjct: 464 IIDGYCKVGMVGAALEVFKLMEHEGCHPNA 493



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 147/328 (44%), Gaps = 16/328 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CK +  TY+ ++  LCK+  +++A ++  QM    +  ++V Y  +I  +      + AK
Sbjct: 626 CKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAK 685

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+  G +PS  T+ V +   CK G+++EA  L+  M +  V P+  TY+  ++G 
Sbjct: 686 SLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGC 745

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK----------------EVEEA 175
              G I+RA      M    C+ +  +Y +L+  + K                  E+   
Sbjct: 746 GHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMV 805

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
             L   M+  G+ PTVVTY+++  G  +  ++E A  L + M   D++ +   Y   I  
Sbjct: 806 WQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKC 865

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
            C      +AV     +     +  +++Y+ LI GLC  G  + A  LF  L       +
Sbjct: 866 CCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHN 925

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDME 323
            V + I+  GL   G +D    L   M+
Sbjct: 926 EVAWKILNDGLLKAGHVDFCSQLLAAMD 953



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 127/275 (46%), Gaps = 16/275 (5%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY   I   CK G +++A+ L  +M+ + + PDVVTYN  I+G  H    + A  
Sbjct: 697 KPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFS 756

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNG----------------KMDEASRLLDLMVQRD 116
               M+D   +P+  T+ +++    K                  +++   +LL+ M++  
Sbjct: 757 TLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHG 816

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           + P   TYS+++ GFC   ++  A  L   M       ++  Y +LI   C  K   +A+
Sbjct: 817 LNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAV 876

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           S   +M+  G +P + +Y+ L +GL +    + A  LF ++   D   +   +    DGL
Sbjct: 877 SFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGL 936

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            K G++    +L   +    C +D ++Y+ L D +
Sbjct: 937 LKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSI 971



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 87/205 (42%)

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
           +E  +A+   R +  K +  +   YN     L      E+  KL+  + ++ +  DT TY
Sbjct: 123 REAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTY 182

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           NT I   CK G +  A   F  L     ++D    N L+ G C++  L  A  L   +P 
Sbjct: 183 NTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPL 242

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
                +  +Y I+I GLC    + +A  L   M  +  + N+  +  LI G  +  +   
Sbjct: 243 MGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHD 302

Query: 350 VIELLHKMKEKKVMPDASIVSMVVD 374
              LL +M  + V+P     + ++D
Sbjct: 303 ARGLLDEMPLRGVVPSVWTYNAMID 327


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 198/426 (46%), Gaps = 76/426 (17%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDK-----------------------------------AK 36
           C+PNTVTY+T+I+GLC  G V++                                   A 
Sbjct: 451 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 510

Query: 37  ALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
            LF+ MK +   P+V TY +LI GLC +     A  LF  M   GV P+ VT+N +++ L
Sbjct: 511 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 570

Query: 97  CKNGKMDEASRLLDL-----------------------------------MVQRDVRPNA 121
            +N ++  A  +L+L                                   M+QR    N 
Sbjct: 571 VENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANL 630

Query: 122 FTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 181
            TY+T++ G+C +G    A  +   M   GCK D+ SY  LI G+CK  ++E A  L+ E
Sbjct: 631 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNE 690

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           MV  G+ P  VTY  L  G  +  +++ A  L E M+R     +  TYN  I GL K   
Sbjct: 691 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 750

Query: 242 IVEAVELFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
              A EL + +   GI     ++  Y  +IDGLCK+G   +ALE+F  +  +  + +++T
Sbjct: 751 FSGAEELCKVMIEEGIFP---NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLT 807

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y+ +I  L  +G++++A +LF ++E + + P+ I +V +I  ++   K       L +M 
Sbjct: 808 YSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMI 867

Query: 359 EKKVMP 364
           +    P
Sbjct: 868 KAGCQP 873



 Score =  193 bits (491), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 183/364 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            P+T TY ++I G C++  +D A  +F QM  E   P+ VTY++LI+GLC +   NEA  
Sbjct: 417 SPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD 476

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+  G+ P+  T    +  LC  G  ++A RL   M  +   PN +TY+ L+ G C
Sbjct: 477 LIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLC 536

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           ++G +  A  LF  M   G   + V+YN LIN   +N+ ++ A  +   M   G+   +V
Sbjct: 537 VSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIV 596

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN +  G   +   + A+ +   M +   +A+  TYNT I G C +G    A+ +   +
Sbjct: 597 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 656

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C+ D  +Y  LI G CK  ++E A  LF  +    L  + VTY  +I G C D ++
Sbjct: 657 RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 716

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D A  L   M+ +   PNV  +  LIHG  + N  S   EL   M E+ + P+    + +
Sbjct: 717 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 776

Query: 373 VDLL 376
           +D L
Sbjct: 777 IDGL 780



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 108/328 (32%), Positives = 169/328 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNTVTYN +I+ L +   +  A  +   M    +  ++VTYN +I G C   D  +A  +
Sbjct: 558 PNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLV 617

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+ +G   ++VT+N I+   C +G    A R+LDLM     +P+ ++Y+ L+ GFC 
Sbjct: 618 MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 677

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+  A  LF  M   G   ++V+Y  LI+GYCK+++++ A SL   M   G +P V T
Sbjct: 678 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 737

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  GL + +    A +L + M  + +  +  TY   IDGLCKNG    A+E+F  + 
Sbjct: 738 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 797

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
              C  ++  Y+ LI  L + G++E A  LF  L R  L+ D +TY  MI      G+++
Sbjct: 798 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 857

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            A +    M +    P +  +  LI G 
Sbjct: 858 HAFNFLGRMIKAGCQPTLWTYGVLIKGL 885



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 179/384 (46%), Gaps = 24/384 (6%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            PN VTY  +IDG CK+  +D A +L   MK     P+V TYN LIHGL   N+++ A+ L
Sbjct: 698  PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 757

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
               M+++G+ P+VVT+  ++D LCKNG    A  + + M+++   PN  TYS+L+     
Sbjct: 758  CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 817

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             GK+  AE LF  +E  G   D+++Y  +I  Y  + +VE A +    M+  G +PT+ T
Sbjct: 818  EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 877

Query: 194  YNTLFLGL------------------------FEIHQVEHALKLFEEMQRDDVAADTSTY 229
            Y  L  GL                        ++    +    +  ++   D        
Sbjct: 878  YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 937

Query: 230  NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
            N  +  L   G   EA EL  ++       D +AYN L+  L +   +++A+ +F+ +  
Sbjct: 938  NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 997

Query: 290  RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
            +     +  Y  +I  LC   +  +A   F +M      P+ ++   LI G +R      
Sbjct: 998  QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDL 1057

Query: 350  VIELLHKMKEKKVMPDASIVSMVV 373
             +E LH M+ ++ MP   I +++ 
Sbjct: 1058 CMEFLHIMETRRYMPSFHIYTILA 1081



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 143/300 (47%), Gaps = 1/300 (0%)

Query: 62  CHANDWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
           CH+ +       F +M+ Q G++  +  ++ ++  L + G           M+   V+PN
Sbjct: 325 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 384

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
              Y+ +++  C  G +  AE +   +       D  +Y  +I G+C+  +++ AL ++ 
Sbjct: 385 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 444

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           +M  +G +P  VTY+TL  GL +  +V  A  L  EM    +     T    I  LC  G
Sbjct: 445 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 504

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
              +A  LF  +    CE ++  Y  LI GLC SG L++A+ LF  + R  +  + VTYN
Sbjct: 505 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 564

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +I+ L  + ++  A  +   M  N +  N++ +  +I G+  +  P K + +++ M ++
Sbjct: 565 ALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 624



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 98/198 (49%)

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
           Y  M+S+G++P ++ YN +   L +   V  A  + +++   +++ DT TY + I G C+
Sbjct: 373 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 432

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
              +  A+++F  +    CE +   Y+ LI+GLC SGR+  A +L R +    ++    T
Sbjct: 433 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 492

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
               I  LC+ G  + A  LF+DM+     PNV  +  LI G          I L H+M 
Sbjct: 493 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 552

Query: 359 EKKVMPDASIVSMVVDLL 376
              V P+    + ++++L
Sbjct: 553 RDGVFPNTVTYNALINIL 570


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 175/329 (53%), Gaps = 13/329 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+  +Y+ ++  L   G + +A ALF  M     +PD++TYN L+ G C      EA+ 
Sbjct: 124 EPDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQS 180

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  E++  G +P+V T+++I++  CK  K++EA  +   M++ +  PNA T++TL+ GFC
Sbjct: 181 LMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFC 240

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK-EVEEALSLYREMVSKGIKPTV 191
             G +  A +LF  ME +GCK   V+YN LI+  CK +  V  A+ L+ ++   G+ PT+
Sbjct: 241 KAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTI 300

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTYN+L  G  E  +    L+L   M  +    D  TYN  I GLC    + +A  LF  
Sbjct: 301 VTYNSLIQGFSE--RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNG 358

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  ++  +N LI GLC   ++E A    R++  R+   D+ T+N +I   C  G 
Sbjct: 359 MA---CAPNVTTFNFLIRGLCAQKKVEEA----RNILDRMTAPDMTTFNTIILAFCKAGA 411

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           M  A ++  DM ++   PN      L HG
Sbjct: 412 MHDAREVMKDMLKHGFYPNTYTTYALAHG 440



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/393 (32%), Positives = 186/393 (47%), Gaps = 45/393 (11%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN +I G CK G + +A ++F  MK   + P+  T N+L+ GLC     + A +L
Sbjct: 23  PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 82

Query: 74  FFEMM--------------------------------DQGVQPSVVTFNVIMDELCKNGK 101
           F EM                                   GV+P + ++++++  L  +G+
Sbjct: 83  FREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASGVEPDLESYHILLSALSDSGR 142

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           M EA  L   M      P+  TY+ LMDG+C  G+   A+ L   +   G + +  +Y+I
Sbjct: 143 MAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSI 199

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           +IN YCK  +VEEA  ++ +M+     P  VT+NTL  G  +   +E A+KLF EM++  
Sbjct: 200 IINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIG 259

Query: 222 VAADTSTYNTFIDGLCKN-GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
             A   TYNT ID LCK  G +  AV+LF  L        I  YN LI G   S R    
Sbjct: 260 CKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF--SERANDG 317

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
           L L   +       DV+TYN +I GLC+  +++ A  LF  M   A APNV  F  LI G
Sbjct: 318 LRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRG 374

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
                K  +   +L +M      PD +  + ++
Sbjct: 375 LCAQKKVEEARNILDRM----TAPDMTTFNTII 403



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 168/361 (46%), Gaps = 44/361 (12%)

Query: 33  DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
           D+A  LF ++      P+  TYN LI G C     ++A  +F +M   G+ P+  T N +
Sbjct: 7   DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 66

Query: 93  MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG- 151
           +  LC+ G+M  A +L   M      P + +++ L+ GF + G   RA E F  M++ G 
Sbjct: 67  LLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMKASGV 123

Query: 152 -------------------------------CKHDDVSYNILINGYCKNKEVEEALSLYR 180
                                          C  D ++YN+L++GYCK  +  EA SL +
Sbjct: 124 EPDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMK 183

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           E++  G +P V TY+ +     ++ +VE A ++F +M   +   +  T+NT I G CK G
Sbjct: 184 EILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAG 243

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS-GRLEIALELFRSLPRRVLVADVVTY 299
            + +A++LF  +  + C+  I  YN LID LCK  G +  A++LF  L    L   +VTY
Sbjct: 244 MLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTY 303

Query: 300 NIMIHGL---CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
           N +I G     NDG       L   M      P+VI +  LI G    N+      L + 
Sbjct: 304 NSLIQGFSERANDGL-----RLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNG 358

Query: 357 M 357
           M
Sbjct: 359 M 359



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 152/299 (50%), Gaps = 10/299 (3%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
            + C P+ +TYN ++DG CK G   +A++L  ++      P+V TY+ +I+  C  +   
Sbjct: 152 AMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVE 211

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  +F +M++    P+ VTFN ++   CK G +++A +L   M +   +    TY+TL+
Sbjct: 212 EAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLI 271

Query: 129 DGFCLT-GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           D  C   G +  A +LF  +E  G     V+YN LI G+  ++   + L L   M ++G 
Sbjct: 272 DSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF--SERANDGLRLLCHMHAEGC 329

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP V+TYN L  GL   ++VE A +LF  M     A + +T+N  I GLC    + EA  
Sbjct: 330 KPDVITYNCLISGLCSANRVEDAQRLFNGMA---CAPNVTTFNFLIRGLCAQKKVEEARN 386

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +   +       D+  +N +I   CK+G +  A E+ + + +     +  T   + HG+
Sbjct: 387 ILDRM----TAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGI 441



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 143/270 (52%), Gaps = 8/270 (2%)

Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
           K D+A RL   ++     PNA TY+ L+ GFC  G++++A  +F  M+S G   +  + N
Sbjct: 5   KHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 64

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
            L+ G C+  ++  AL L+REM +    PT  ++N L  G F       A++ F+EM+  
Sbjct: 65  TLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFF---MAGRAIEFFKEMKAS 121

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            V  D  +Y+  +  L  +G + EA  LF     + C  DI  YN L+DG CK G+   A
Sbjct: 122 GVEPDLESYHILLSALSDSGRMAEAHALFSA---MTCSPDIMTYNVLMDGYCKIGQTYEA 178

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
             L + + +     +V TY+I+I+  C   ++++A ++F+ M E+   PN + F TLI G
Sbjct: 179 QSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAG 238

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           F +       I+L  +M  +K+   A+IV+
Sbjct: 239 FCKAGMLEDAIKLFAEM--EKIGCKATIVT 266



 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 151/302 (50%), Gaps = 7/302 (2%)

Query: 64  ANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
           A   ++A RLF E++     P+  T+NV++   CK G+M +A  +   M    + PNA T
Sbjct: 3   ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
            +TL+ G C  G+++ A +LF  M++        S+NIL+ G+        A+  ++EM 
Sbjct: 63  MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFM---AGRAIEFFKEMK 119

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
           + G++P + +Y+ L   L +  ++  A  LF  M     + D  TYN  +DG CK G   
Sbjct: 120 ASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTY 176

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           EA  L + +     E ++  Y+ +I+  CK  ++E A E+F  +     V + VT+N +I
Sbjct: 177 EAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLI 236

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP-SKVIELLHKMKEKKV 362
            G C  G ++ A  LF +ME+      ++ + TLI    +        ++L +K++   +
Sbjct: 237 AGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGL 296

Query: 363 MP 364
            P
Sbjct: 297 TP 298


>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
 gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
          Length = 481

 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 112/336 (33%), Positives = 169/336 (50%), Gaps = 10/336 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEAK 71
           +PN VTYNT+I G C  G V  A  +  +M+    I PD  TY +LI G C      +A 
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAA 203

Query: 72  RLFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           ++F EM+ QG V PS V +N ++   C  GK+D A +  + MVQR V     TY+ L+  
Sbjct: 204 KVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHA 263

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
             + G+ + A  +   M+  G   D  +YNILINGYCK    ++AL ++ EM  KG++ T
Sbjct: 264 LFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRAT 323

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            VTY +L        QV+   +LF+   +  +  D   YN  I+  C  G +  A E+  
Sbjct: 324 AVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMA 383

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +   +   D   YN LI G C  GRL+ A  L   + +R +  D+        GLC +G
Sbjct: 384 EMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDL--------GLCKNG 435

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           Q D A +L  +M    + P+   +++LI G   +++
Sbjct: 436 QGDDAENLMKEMVGKGITPDDSTYISLIEGLTTVDE 471



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 165/317 (52%), Gaps = 6/317 (1%)

Query: 51  VVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD 110
             T+N ++  LC       A     E++ Q  +P+ VT+N ++   C  G++  A  ++ 
Sbjct: 116 TTTFNIMLRHLCATGKPVRA----LELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMR 171

Query: 111 LMVQRD-VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG-CKHDDVSYNILINGYCK 168
            M +R  + P+ +TY+TL+ G+C  G++  A ++F  M + G      V YN LI GYC 
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCD 231

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             +++ AL    +MV +G+  TV TYN L   LF   +   A  + EEMQR+ ++ D  T
Sbjct: 232 RGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFT 291

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           YN  I+G CK G   +A+E+F  +           Y  LI    + G+++    LF+   
Sbjct: 292 YNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAV 351

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
           ++ +  DVV YN +I+  C  G M++A ++  +ME+  + P+ + + TLI GF  + +  
Sbjct: 352 KKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLD 411

Query: 349 KVIELLHKMKEKKVMPD 365
           +   L+ +M ++ + PD
Sbjct: 412 EARGLIDEMTKRGIQPD 428



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 173/354 (48%), Gaps = 14/354 (3%)

Query: 16  TVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFF 75
           T T+N ++  LC  G   +A  L  QM      P+ VTYN++I G C       A  +  
Sbjct: 116 TTTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMR 171

Query: 76  EMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLD-LMVQRDVRPNAFTYSTLMDGFCL 133
           EM ++ G+ P   T+  ++   CK G+M++A+++ D ++ Q +V P+A  Y+ L+ G+C 
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCD 231

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK++ A +    M   G      +YN+L++    +    +A ++  EM   G+ P V T
Sbjct: 232 RGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFT 291

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G  +    + AL++FEEM R  V A   TY + I    + G + E   LF+   
Sbjct: 292 YNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAV 351

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D+  YN LI+  C  G +E A E+   + ++ +  D VTYN +I G C  G++D
Sbjct: 352 KKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLD 411

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           +A  L  +M +  + P++        G  +  +      L+ +M  K + PD S
Sbjct: 412 EARGLIDEMTKRGIQPDL--------GLCKNGQGDDAENLMKEMVGKGITPDDS 457



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 125/254 (49%), Gaps = 6/254 (2%)

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           T++ ++   C TGK  RA EL   M     + + V+YN +I G+C    V+ AL + REM
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMREM 173

Query: 183 VSKG-IKPTVVTYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCKNG 240
             +G I P   TY TL  G  +I ++E A K+F+EM  + +VA     YN  I G C  G
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRG 233

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            +  A++    +      + +  YN L+  L   GR   A  +   + R  L  DV TYN
Sbjct: 234 KLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYN 293

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           I+I+G C +G   KA ++F +M    V    + + +LI+ F R  +  +   L     +K
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKK 353

Query: 361 KVMPDASIVSMVVD 374
            + PD  + + +++
Sbjct: 354 GIRPDVVMYNALIN 367


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 191/355 (53%), Gaps = 12/355 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V Y+T+++G  ++G VD A  L   M      P+ V YN+ + GLC A  W +  
Sbjct: 276 CTPDVVIYSTLVNGFSEQGRVDDALVLLNTML---CKPNTVCYNAALKGLCMAERWKDVG 332

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+ +   P+  TF+++   LC++G +D A  +++ M +   RP+   Y+TL++ F
Sbjct: 333 ELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYF 392

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+++ A  L   ++SM C  D +S+N  +   C+ +   +   L  +M+ +      
Sbjct: 393 SEQGRVDDALML---LDSMLCNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIE 449

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +T+N L   L +   V HA+++FE+M +     D  TY++ I+G  + G +  A+ELF++
Sbjct: 450 MTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQS 509

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ DI +YN ++ GLC++ R E A EL  ++ R+    + +T+NI+I+ LC  G 
Sbjct: 510 M---PCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGF 566

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            D+A ++F  M E    P++  +  LI+GF    +    + LL  M  K   PDA
Sbjct: 567 ADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTMSCK---PDA 618



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 176/354 (49%), Gaps = 9/354 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN VT+ T I   C+ G +D A  L  +M      PDVV Y++L++G       ++A 
Sbjct: 241 CHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDAL 300

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M+    +P+ V +N  +  LC   +  +   L+  MV++D  PN  T+S L    
Sbjct: 301 VLLNTML---CKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCL 357

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G ++ A E+   M+  GC+ D V YN LIN + +   V++AL L   M+     P  
Sbjct: 358 CQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSML---CNPDT 414

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +++N     L    +     +L  +M R+D      T+N  ID LC++G +  A+E+F  
Sbjct: 415 ISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQ 474

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   +C  DI  Y+ LI+G  + G +E A+ELF+S+P +    D+ +YN ++ GLC   +
Sbjct: 475 MPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMPCK---PDIFSYNAVLKGLCRAAR 531

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            + A +L  +M      PN I F  LI+   +     + IE+  +M E    PD
Sbjct: 532 WEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPD 585



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 177/356 (49%), Gaps = 9/356 (2%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           ++CKPNTV YN  + GLC          L  +M  ++  P+  T++ L   LC     + 
Sbjct: 306 MLCKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDC 365

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +  +M   G +P VV +N +++   + G++D+A  LLD M+     P+  +++  + 
Sbjct: 366 AMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSML---CNPDTISFNAALK 422

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
             C T +    EEL   M    C   ++++NILI+  C++  V  A+ ++ +M      P
Sbjct: 423 ALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTP 482

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            +VTY++L  G  E   VE A++LF+ M       D  +YN  + GLC+     +A EL 
Sbjct: 483 DIVTYSSLINGFSEQGLVESAIELFQSMP---CKPDIFSYNAVLKGLCRAARWEDAGELI 539

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +    C  +   +N LI+ LC+ G  + A+E+F+ +P      D+ TYN +I+G    
Sbjct: 540 ANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQ 599

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           G++D A +L   M   +  P+ I + + + G  R  +  +  E++ +M  KK  P+
Sbjct: 600 GRLDDALNLLSTM---SCKPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPN 652



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 160/323 (49%), Gaps = 9/323 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T++ +   LC+ G VD A  +  QM+     PDVV YN+LI+        ++A 
Sbjct: 343 CPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDAL 402

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M+     P  ++FN  +  LC+  +  +   L+  M++ D      T++ L+D  
Sbjct: 403 MLLDSML---CNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSL 459

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +N A E+F  M    C  D V+Y+ LING+ +   VE A+ L++ M     KP +
Sbjct: 460 CQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSM---PCKPDI 516

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            +YN +  GL    + E A +L   M R D   +  T+N  I+ LC+ G+   A+E+F+ 
Sbjct: 517 FSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQ 576

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       DI  YN LI+G  + GRL+ AL L  ++  +    D ++YN  + GLC   +
Sbjct: 577 MPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTMSCK---PDAISYNSTLKGLCRAER 633

Query: 312 MDKAHDLFLDMEENAVAPNVIIF 334
             +A ++  +M      PN + F
Sbjct: 634 WKEAEEIVAEMLRKKCPPNEVTF 656



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 177/410 (43%), Gaps = 67/410 (16%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  +  N +I  LC    +  A+ +   +K E+ + D V++N+L+ G C      +A+R+
Sbjct: 108 PAVIACNILIKKLCAHRRLADAERVLDALK-ESGSADAVSHNTLVAGYCRDGRLADAERV 166

Query: 74  FFEMMDQG-------------------------------VQPSVVTFNVIMDELCKNGKM 102
                  G                               V P   T+N ++  LC   + 
Sbjct: 167 LEAAKVSGAANVVTYTALINGYCRSGRLADALNLIASMPVAPDTYTYNTVLKGLCGAKQW 226

Query: 103 DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
           ++A  L++ M++ +  PN  T++T +  FC  G ++ A +L   M   GC  D V Y+ L
Sbjct: 227 EKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTL 286

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           +NG+ +   V++AL L   M+    KP  V YN    GL    + +   +L  EM R D 
Sbjct: 287 VNGFSEQGRVDDALVLLNTML---CKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDC 343

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
             + +T++     LC++G +  A+E+   +    C  D+  YN LI+   + GR++ AL 
Sbjct: 344 PPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALM 403

Query: 283 LFRSL---PRRV--------------------LVADVV---------TYNIMIHGLCNDG 310
           L  S+   P  +                    L+A ++         T+NI+I  LC  G
Sbjct: 404 LLDSMLCNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHG 463

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            ++ A ++F  M +    P+++ + +LI+GF         IEL   M  K
Sbjct: 464 LVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMPCK 513



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 158/317 (49%), Gaps = 9/317 (2%)

Query: 58  IHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV 117
           +  L    D + A RL   M      P+V+  N+++ +LC + ++ +A R+LD + +   
Sbjct: 83  LRRLVQLEDLDAALRLVGSM-PSSEPPAVIACNILIKKLCAHRRLADAERVLDAL-KESG 140

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
             +A +++TL+ G+C  G++  AE +  + +  G   + V+Y  LINGYC++  + +AL+
Sbjct: 141 SADAVSHNTLVAGYCRDGRLADAERVLEAAKVSG-AANVVTYTALINGYCRSGRLADALN 199

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           L   + S  + P   TYNT+  GL    Q E A +L EEM R++   +  T+ T I   C
Sbjct: 200 L---IASMPVAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFC 256

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
           +NG +  AV+L   +    C  D+  Y+ L++G  + GR++ AL L  ++   +   + V
Sbjct: 257 QNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTM---LCKPNTV 313

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            YN  + GLC   +     +L  +M      PN   F  L     +       +E++ +M
Sbjct: 314 CYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQM 373

Query: 358 KEKKVMPDASIVSMVVD 374
           ++    PD  I + +++
Sbjct: 374 QKYGCRPDVVIYNTLIN 390



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 107/191 (56%), Gaps = 9/191 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY+++I+G  ++G V+ A  LF  M      PD+ +YN+++ GLC A  W +A 
Sbjct: 480 CTPDIVTYSSLINGFSEQGLVESAIELFQSMP---CKPDIFSYNAVLKGLCRAARWEDAG 536

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M  +   P+ +TFN++++ LC+ G  D A  +   M +    P+ FTY+ L++GF
Sbjct: 537 ELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGF 596

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+++ A  L   + +M CK D +SYN  + G C+ +  +EA  +  EM+ K   P  
Sbjct: 597 SEQGRLDDALNL---LSTMSCKPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNE 653

Query: 192 VTY---NTLFL 199
           VT+   N LF+
Sbjct: 654 VTFKYANQLFI 664


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 196/418 (46%), Gaps = 70/418 (16%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN VTYN++IDG    G V  AK +   M  + I  +  TY  LI G C      +A+
Sbjct: 287 CEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAE 346

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L   MM++ +      + V++   C  G++D+A R+ D M++  ++ N    ++L++G+
Sbjct: 347 KLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGY 406

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +N+A E+  SM+    K D   YN L++G+CK ++  +A  L  EM +KG+  TV
Sbjct: 407 CKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTV 466

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST----------------------- 228
           VTYNTL   LF +  VEHAL ++  M +  VA +  T                       
Sbjct: 467 VTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKD 526

Query: 229 ------------YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
                       YNT I G CK   +V+A E+F  +  L    D   Y  LIDG CK G 
Sbjct: 527 ALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGN 586

Query: 277 LEIALEL-----------------------FRS------------LPRRVLVADVVTYNI 301
           L  AL+L                       FRS            +  R L  +VVTY  
Sbjct: 587 LVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGS 646

Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           +I G C+ G MDKA++ +  M +  +APN+II   ++    R  K  +   +LH++ +
Sbjct: 647 LIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIAD 704



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 182/369 (49%), Gaps = 2/369 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G+ G V  P+  + N+++  L + G   KA  ++ QM    I PD+ +Y  +++  C   
Sbjct: 213 GKCGRV--PSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEG 270

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             +EA     EM     +P+VVT+N ++D     G +  A ++L LM ++ +  N+ TY+
Sbjct: 271 RVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYT 330

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+ G+C  G++ +AE+L G M       D+  Y +LI+ YC    V++AL +   M+  
Sbjct: 331 LLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKV 390

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G+K   V  N+L  G  ++  V  A ++   M+  ++  D+  YNT +DG CK    ++A
Sbjct: 391 GLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKA 450

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            +L   +        +  YN L+  L   G +E AL ++  + +R +  + VTY  ++  
Sbjct: 451 FKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDA 510

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
               G  D+A  ++ D        ++ ++ T+I GF ++ K  +  E+  KMKE    PD
Sbjct: 511 FFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPD 570

Query: 366 ASIVSMVVD 374
                 ++D
Sbjct: 571 EITYRTLID 579



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 182/415 (43%), Gaps = 72/415 (17%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY T++D   K G  D+A  ++     +     +  YN++I G C      +A+ +
Sbjct: 499 PNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEI 558

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +M + G  P  +T+  ++D  CK G + EA +L D+  +  +  +   Y++L+ G   
Sbjct: 559 FLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFR 618

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           + ++ +   L   M++     + V+Y  LI G+C    +++A + Y +M+ KGI P ++ 
Sbjct: 619 SEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIII 678

Query: 194 YNTLFLGLFEIHQVEHA-LKLFEEMQRDDVAADTST------------------------ 228
            + +   L+   +++ A L L +    D +AA   +                        
Sbjct: 679 GSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKA 738

Query: 229 ----------YNTFIDGLCKNGYIVEAVELFRTLGILK---------CEL---------- 259
                     YN  I GLCK+  I +   +   L +LK         C L          
Sbjct: 739 MSIPISNNIVYNIAITGLCKSKNIDDVRRILSDL-LLKGFCPDNYTYCSLIHACSAVGKV 797

Query: 260 -----------------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
                            +I  YN LI+GLCKSG L+ A  LF  L R+ L   VVTYN +
Sbjct: 798 NEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTL 857

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           I G C  G+  +A +L   M E  + P+ I + TLIHG     K  + + LL++M
Sbjct: 858 IDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEM 912



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 164/320 (51%), Gaps = 4/320 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +T  YN++I G+ +   + K   L  +MK   ++P+VVTY SLI G C     ++A   +
Sbjct: 605 STEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAY 664

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP-NAFTYSTLMDGFCL 133
           F+M+D+G+ P+++  + I+  L ++GK+DEA+ +L  +   D+ P  A  +S  +    L
Sbjct: 665 FKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIA--DIDPIAAHAHSVELPKSDL 722

Query: 134 TG-KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +  +  + FG         +++ YNI I G CK+K +++   +  +++ KG  P   
Sbjct: 723 RHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNY 782

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY +L      + +V  A  L ++M    +  +   YN  I+GLCK+G +  A  LF  L
Sbjct: 783 TYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKL 842

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   +  YN LIDG CK GR   ALEL   +    +    +TY+ +IHGL  +G+ 
Sbjct: 843 ARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKS 902

Query: 313 DKAHDLFLDMEENAVAPNVI 332
           +++  L  +M +     +V+
Sbjct: 903 EQSVGLLNEMMKAGKGSSVM 922



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 164/330 (49%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +   ++ I+    ++G    A  +F  M      P + + NSL+  L    +  +A  ++
Sbjct: 185 SPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVY 244

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M+  G+ P + ++ ++++  CK G++DEA   +  M +    PN  TY++L+DG+   
Sbjct: 245 EQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSL 304

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +  A+++   M   G   +  +Y +LI GYCK  ++E+A  L   M+ K +      Y
Sbjct: 305 GDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVY 364

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             L        +V+ AL++ + M +  +  +T   N+ I+G CK G++ +A E+  ++  
Sbjct: 365 GVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKD 424

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + D   YN L+DG CK      A +L   +  + +   VVTYN ++  L + G ++ 
Sbjct: 425 WNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEH 484

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
           A  ++  M +  VAPN + + TL+  F ++
Sbjct: 485 ALHIWNLMHKRGVAPNEVTYCTLLDAFFKV 514



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 155/342 (45%), Gaps = 19/342 (5%)

Query: 40  LQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM-------------DQGVQP-- 84
           L  K     PDV +Y  ++H L  A  + E +    E++             D+ V    
Sbjct: 121 LASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYR 180

Query: 85  ----SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
               S   F++I+    + G    A  + D M +    P+  + ++L+      G+  +A
Sbjct: 181 EFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKA 240

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
             ++  M ++G   D  SY I++N YCK   V+EA +  +EM     +P VVTYN+L  G
Sbjct: 241 LLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDG 300

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
              +  V  A K+   M    +  ++ TY   I G CK G + +A +L   +      +D
Sbjct: 301 YVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVD 360

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
              Y  LI   C +GR++ AL +  ++ +  L  + V  N +I+G C  G ++KA ++ +
Sbjct: 361 EHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLV 420

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
            M++  + P+   + TL+ GF +     K  +L  +M  K V
Sbjct: 421 SMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGV 462



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 137/302 (45%)

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F  M   G  PS+ + N ++  L +NG+  +A  + + M+   + P+ F+Y+ +++ +C
Sbjct: 208 VFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYC 267

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+++ A      ME   C+ + V+YN LI+GY    +V  A  +   M  KGI     
Sbjct: 268 KEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSR 327

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L  G  +  Q+E A KL   M   ++  D   Y   I   C  G + +A+ +   +
Sbjct: 328 TYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAM 387

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  +++    N LI+G CK G +  A E+  S+    L  D   YN ++ G C     
Sbjct: 388 LKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDF 447

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            KA  L  +M    V   V+ + TL+     +      + + + M ++ V P+      +
Sbjct: 448 IKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTL 507

Query: 373 VD 374
           +D
Sbjct: 508 LD 509



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 3/164 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY ++I      G V++A  L   M    + P++V YN+LI+GLC + + + A+RL
Sbjct: 779 PDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRL 838

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F ++  +G+ P+VVT+N ++D  CK G+  EA  L D M +  + P++ TYSTL+ G  +
Sbjct: 839 FNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYM 898

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCK--NKEVEEA 175
            GK  ++  L   M   G K   V   ++   Y K  +K+ E A
Sbjct: 899 EGKSEQSVGLLNEMMKAG-KGSSVMDPLVARAYVKWRDKQSESA 941


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  193 bits (491), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 193/365 (52%), Gaps = 4/365 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYN +I+GLC  G + +   L   MK   + PDVVTYN+LI G        EA++L
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDVRPNAFTYSTLMDGFC 132
             +M + GV+ + VT N+ +  LCK  K +  +R + +L+      P+  TY TL+  + 
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 427

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A E+   M   G K + ++ N +++  CK ++++EA +L      +G     V
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEV 487

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL +G F   +VE AL++++EM++  +    ST+N+ I GLC +G    A+E F  L
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL 547

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D   +N +I G CK GR+E A E +    +     D  T NI+++GLC +G  
Sbjct: 548 AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607

Query: 313 DKAHDLFLDM-EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +KA + F  + EE  V  + + + T+I  F +  K  +  +LL +M+EK + PD    + 
Sbjct: 608 EKALNFFNTLIEEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNS 665

Query: 372 VVDLL 376
            + LL
Sbjct: 666 FISLL 670



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/351 (33%), Positives = 183/351 (52%), Gaps = 6/351 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTYNT+IDG  + G   +A+ L  QM+ + +  + VT+N  +  LC         R
Sbjct: 342 QPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTR 401

Query: 73  LFFEMMD-QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
              E++D  G  P +VT++ ++    K G +  A  ++  M Q+ ++ N  T +T++D  
Sbjct: 402 KVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++ A  L  S    G   D+V+Y  LI G+ + ++VE+AL ++ EM    I PTV
Sbjct: 462 CKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTV 521

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+N+L  GL    + E A++ F+E+    +  D ST+N+ I G CK G + +A E +  
Sbjct: 522 STFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNE 581

Query: 252 LGILKCELDIQAYNC--LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
              +K       Y C  L++GLCK G  E AL  F +L     V D VTYN MI   C D
Sbjct: 582 --SIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKD 638

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            ++ +A+DL  +MEE  + P+   + + I   +   K S+  ELL K   K
Sbjct: 639 KKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/374 (31%), Positives = 188/374 (50%), Gaps = 11/374 (2%)

Query: 8   IGVVCKPNTVTYNTIIDGLCK--EGF-VDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           I +  KPN +T NT++ GL +    F +  A+ +F  M    ++ +V T+N L++G C  
Sbjct: 158 IRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLE 217

Query: 65  NDWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
               +A  +   M+ +  V P  VT+N I+  + K G++ +   LL  M +  + PN  T
Sbjct: 218 GKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVT 277

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           Y+ L+ G+C  G +  A ++   M+      D  +YNILING C    + E L L   M 
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK 337

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK----N 239
           S  ++P VVTYNTL  G FE+     A KL E+M+ D V A+  T+N  +  LCK     
Sbjct: 338 SLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKRE 397

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
               +  EL    G      DI  Y+ LI    K G L  ALE+ R + ++ +  + +T 
Sbjct: 398 AVTRKVKELVDMHGF---SPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITL 454

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           N ++  LC + ++D+AH+L     +     + + + TLI GF R  K  K +E+  +MK+
Sbjct: 455 NTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514

Query: 360 KKVMPDASIVSMVV 373
            K+ P  S  + ++
Sbjct: 515 VKITPTVSTFNSLI 528



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 148/296 (50%), Gaps = 26/296 (8%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G+ G+  K NT+T NTI+D LCKE  +D+A  L           D VTY +LI G     
Sbjct: 443 GQKGI--KMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREE 500

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
              +A  ++ EM    + P+V TFN ++  LC +GK + A    D + +  + P+  T++
Sbjct: 501 KVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFN 560

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           +++ G+C  G++ +A E +        K D+ + NIL+NG CK    E+AL+ +  ++ +
Sbjct: 561 SIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEE 620

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
               T VTYNT+     +  +++ A  L  EM+   +  D  TYN+FI  L ++G + E 
Sbjct: 621 REVDT-VTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSET 679

Query: 246 VELFR----TLGILKCELDIQ-------------------AYNCLIDGLCKSGRLE 278
            EL +      G +K +L ++                   AY+ +ID LC  GRL+
Sbjct: 680 DELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLK 735



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 161/336 (47%), Gaps = 46/336 (13%)

Query: 84  PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG---FCLTGKINRA 140
           PS   F++ +      GK   A ++   M++  ++PN  T +TL+ G   +  +  I+ A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFL 199
            E+F  M  +G   +  ++N+L+NGYC   ++E+AL +   MVS+  + P  VTYNT+  
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA---VELFRTLGILK 256
            + +  ++    +L  +M+++ +  +  TYN  + G CK G + EA   VEL +   +L 
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
              D+  YN LI+GLC +G +   LEL  ++    L  DVVTYN +I G    G   +A 
Sbjct: 309 ---DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEAR 365

Query: 317 DLFLDMEENAV------------------------------------APNVIIFVTLIHG 340
            L   ME + V                                    +P+++ + TLI  
Sbjct: 366 KLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKA 425

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           ++++   S  +E++ +M +K +  +   ++ ++D L
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 127/251 (50%), Gaps = 24/251 (9%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTY T+I G  +E  V+KA  ++ +MK   I P V T+NSLI GLCH      A   F E
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           + + G+ P   TFN I+   CK G++++A    +  ++   +P+ +T + L++G C  G 
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
             +A   F ++     + D V+YN +I+ +CK+K+++EA  L  EM  KG++P   TYN+
Sbjct: 607 TEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNS 665

Query: 197 LFLGLFE---IHQVEHALKLFE----EMQRD----------------DVAADTSTYNTFI 233
               L E   + + +  LK F      M+RD                ++  +   Y+  I
Sbjct: 666 FISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVI 725

Query: 234 DGLCKNGYIVE 244
           D LC  G + E
Sbjct: 726 DELCSRGRLKE 736



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 23/116 (19%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +TVTYNT+I   CK+  + +A  L  +M+ + + PD  TYNS I  L      +E   L 
Sbjct: 624 DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683

Query: 75  ------FEMMDQGVQ------PSV-----------VTFNVIMDELCKNGKMDEASR 107
                 F  M + +Q      P+            + ++ ++DELC  G++ E SR
Sbjct: 684 KKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSR 739


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  193 bits (491), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 184/353 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+N +I+ LC EG  +K+  L  +M+     P +VTYN+++H  C    +  A  L
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +GV   V T+N+++ +LC++ ++ +   LL  M +R + PN  TY+TL++GF  
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 310

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A +L   M S G   + V++N LI+G+      +EAL ++  M +KG+ P+ V+
Sbjct: 311 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 370

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +  + + A   +  M+R+ V     TY   IDGLCKNG++ EAV L   + 
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 430

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + DI  Y+ LI+G CK GR + A E+   + R  L  + + Y+ +I+  C  G + 
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +A  ++  M       +   F  L+    +  K ++  E +  M    ++P+ 
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543



 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 176/362 (48%), Gaps = 1/362 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+Y  ++DGLCK    D A+  +++MK   +    +TY  +I GLC     +EA  L
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G+ P +VT++ +++  CK G+   A  ++  + +  + PN   YSTL+   C 
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A  ++ +M   G   D  ++N+L+   CK  +V EA    R M S GI P  V+
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 545

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           ++ L  G     +   A  +F+EM +        TY + + GLCK G++ EA +  ++L 
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +   +D   YN L+  +CKSG L  A+ LF  + +R ++ D  TY  +I GLC  G+  
Sbjct: 606 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665

Query: 314 KAHDLFLDMEENA-VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            A     + E    V PN +++   + G  +  +    I    +M      PD    + +
Sbjct: 666 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 725

Query: 373 VD 374
           +D
Sbjct: 726 ID 727



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 186/366 (50%), Gaps = 6/366 (1%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +C  N   Y+ +I    +EG +  +  +F  M     NP V T N+++  +  + +    
Sbjct: 118 LCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 177

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
                EM+ + + P V TFN++++ LC  G  +++S L+  M +    P   TY+T++  
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +C  G+   A EL   M+S G   D  +YN+LI+  C++  + +   L R+M  + I P 
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            VTYNTL  G     +V  A +L  EM    ++ +  T+N  IDG    G   EA+++F 
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357

Query: 251 TL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            +   G+   E+   +Y  L+DGLCK+   ++A   +  + R  +    +TY  MI GLC
Sbjct: 358 MMEAKGLTPSEV---SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 414

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            +G +D+A  L  +M ++ + P+++ +  LI+GF ++ +     E++ ++    + P+  
Sbjct: 415 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474

Query: 368 IVSMVV 373
           I S ++
Sbjct: 475 IYSTLI 480



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 166/344 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T N I+  + K G      +   +M    I PDV T+N LI+ LC    + ++  L
Sbjct: 156 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 215

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   G  P++VT+N ++   CK G+   A  LLD M  + V  +  TY+ L+   C 
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           + +I +   L   M       ++V+YN LING+    +V  A  L  EM+S G+ P  VT
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L  G       + ALK+F  M+   +     +Y   +DGLCKN     A   +  + 
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                +    Y  +IDGLCK+G L+ A+ L   + +  +  D+VTY+ +I+G C  G+  
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 455

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            A ++   +    ++PN II+ TLI+   R+    + I +   M
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 499



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 175/341 (51%), Gaps = 3/341 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TYN +I  LC+   + K   L   M+   I+P+ VTYN+LI+G  +      A +L  EM
Sbjct: 265 TYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM 324

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +  G+ P+ VTFN ++D     G   EA ++  +M  + + P+  +Y  L+DG C   + 
Sbjct: 325 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 384

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A   +  M+  G     ++Y  +I+G CKN  ++EA+ L  EM   GI P +VTY+ L
Sbjct: 385 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 444

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G  ++ + + A ++   + R  ++ +   Y+T I   C+ G + EA+ ++  + +   
Sbjct: 445 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 504

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D   +N L+  LCK+G++  A E  R +    ++ + V+++ +I+G  N G+  KA  
Sbjct: 505 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 564

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVR---INKPSKVIELLH 355
           +F +M +    P    + +L+ G  +   + +  K ++ LH
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 173/362 (47%), Gaps = 1/362 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +TV YNT++  +CK G + KA +LF +M   +I PD  TY SLI GLC       A    
Sbjct: 612 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 671

Query: 75  FEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            E   +G V P+ V +   +D + K G+        + M      P+  T + ++DG+  
Sbjct: 672 KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 731

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GKI +  +L   M +     +  +YNIL++GY K K+V  +  LYR ++  GI P  +T
Sbjct: 732 MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 791

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            ++L LG+ E + +E  LK+ +      V  D  T+N  I   C NG I  A +L + + 
Sbjct: 792 CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 851

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            L   LD    + ++  L ++ R + +  +   + ++ +  +   Y  +I+GLC  G + 
Sbjct: 852 SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 911

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  +  +M  + + P  +    ++    +  K  +   LL  M + K++P  +  + ++
Sbjct: 912 TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 971

Query: 374 DL 375
            L
Sbjct: 972 HL 973



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 162/329 (49%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P+ VT N +IDG  + G ++K   L  +M  +N  P++ TYN L+HG     D + +  L
Sbjct: 717  PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 776

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            +  ++  G+ P  +T + ++  +C++  ++   ++L   + R V  + +T++ L+   C 
Sbjct: 777  YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 836

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             G+IN A +L   M S+G   D  + + +++   +N   +E+  +  EM  +GI P    
Sbjct: 837  NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRK 896

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            Y  L  GL  +  ++ A  + EEM    +       +  +  L K G   EA  L R + 
Sbjct: 897  YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 956

Query: 254  ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +K    I ++  L+   CK+G +  ALEL   +    L  D+V+YN++I GLC  G M 
Sbjct: 957  KMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMA 1016

Query: 314  KAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
             A +L+ +M+ +    N   +  LI G +
Sbjct: 1017 LAFELYEEMKGDGFLANATTYKALIRGLL 1045



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/399 (22%), Positives = 177/399 (44%), Gaps = 36/399 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNTV+++ +I+G    G   KA ++F +M     +P   TY SL+ GLC      EA++ 
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              +         V +N ++  +CK+G + +A  L   MVQR + P+++TY++L+ G C 
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660

Query: 134 TGK------INRAEELFGS------------------------------MESMGCKHDDV 157
            GK        +  E  G+                              M+++G   D V
Sbjct: 661 KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIV 720

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           + N +I+GY +  ++E+   L  EM ++   P + TYN L  G  +   V  +  L+  +
Sbjct: 721 TTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSI 780

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
             + +  D  T ++ + G+C++  +   +++ +       E+D   +N LI   C +G +
Sbjct: 781 ILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEI 840

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A +L + +    +  D  T + M+  L  + +  ++  +  +M +  ++P    ++ L
Sbjct: 841 NWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGL 900

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           I+G  R+        +  +M   K+ P     S +V  L
Sbjct: 901 INGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 939



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 120/262 (45%)

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
           R    N   Y  L+  +   G I  + E+F  M   G      + N ++    K+ E   
Sbjct: 117 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 176

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
             S  +EM+ + I P V T+N L   L      E +  L ++M++   A    TYNT + 
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
             CK G    A+EL   +     + D+  YN LI  LC+S R+     L R + +R++  
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 296

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           + VTYN +I+G  N+G++  A  L  +M    ++PN + F  LI G +      + +++ 
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356

Query: 355 HKMKEKKVMPDASIVSMVVDLL 376
           + M+ K + P      +++D L
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGL 378



 Score = 40.8 bits (94), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 30/49 (61%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGL 61
            K + V+YN +I GLC +G +  A  L+ +MKG+    +  TY +LI GL
Sbjct: 996  KLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  193 bits (491), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 189/352 (53%), Gaps = 7/352 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V Y+  IDGLC+ G+V +A  +  +M G+ + P+V T+ SLI GLC       A RL
Sbjct: 249 PNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRL 308

Query: 74  FFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           F +++     +P+V T+ V++   CK GK+  A  LL  MV++ + PN  TY+TL+ G C
Sbjct: 309 FLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHC 368

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  +RA EL   M+  G   +  +YN +I G+CK  +++EA  + R   S+G+    V
Sbjct: 369 KGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKV 428

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR-- 250
           TY  L     +   +  AL LF++M       D  TY T I   C+   + ++ +LF   
Sbjct: 429 TYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKC 488

Query: 251 -TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
            ++G++  +   Q Y  +I G C+ G+L  AL++F  + +   + D +TY  +I  LC +
Sbjct: 489 LSIGLVPTK---QTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKE 545

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
            ++++A  LF  M +  + P  +  VTL + + R +K +  +  L ++ +++
Sbjct: 546 SRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKRQ 597



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 184/377 (48%), Gaps = 5/377 (1%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           MA   G +    +P+  ++  ++ G C+EG  ++A AL   M  +    D  T   ++  
Sbjct: 170 MARAAGGV----RPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRA 225

Query: 61  LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
            C    +     LF  M + G  P++V ++  +D LC+ G + +A  +L+ MV + ++PN
Sbjct: 226 FCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPN 285

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
            +T+++L+DG C  G + RA  LF  + +S   K +  +Y ++I GYCK  ++  A  L 
Sbjct: 286 VYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLL 345

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
             MV +G+ P   TY TL  G  +    + A +L  +M+ +    +  TYN  I G CK 
Sbjct: 346 GRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKK 405

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G I EA ++ R        LD   Y  LI   CK G +  AL+LF+ +  +    D+ TY
Sbjct: 406 GKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTY 465

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
             +I   C   QM+++  LF       + P    + ++I G+ R+ K +  +++  +M +
Sbjct: 466 TTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQ 525

Query: 360 KKVMPDASIVSMVVDLL 376
              +PD+     ++  L
Sbjct: 526 HGCLPDSITYGALISSL 542



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 165/329 (50%), Gaps = 3/329 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHAND 66
           +G   KPN  T+ ++IDGLCK G++++A  LFL++ K  +  P+V TY  +I G C    
Sbjct: 278 VGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGK 337

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
              A+ L   M++QG+ P+  T+  ++   CK G  D A  L++ M      PN +TY+ 
Sbjct: 338 LARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNA 397

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++ GFC  GKI  A ++     S G   D V+Y ILI  +CK   +  AL L+++M  K 
Sbjct: 398 IIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKS 457

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
             P + TY T+     +  Q+E + +LF++     +     TY + I G C+ G +  A+
Sbjct: 458 CHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSAL 517

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           ++F  +    C  D   Y  LI  LCK  RLE A  LF ++  + LV   VT   + +  
Sbjct: 518 KVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEY 577

Query: 307 CNDGQMDKAHDLF--LDMEENAVAPNVII 333
           C   ++  A      LD  + A   + ++
Sbjct: 578 CRRDKITIAVSFLDRLDKRQQAHTADALV 606



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 170/354 (48%), Gaps = 15/354 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN  TY  +I G CKEG + +A+ L  +M  + + P+  TY +LIHG C    ++ A  
Sbjct: 319 KPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFE 378

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M  +G  P++ T+N I+   CK GK+ EA ++L +   + +  +  TY+ L+   C
Sbjct: 379 LMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHC 438

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G I  A +LF  M    C  D  +Y  +I  YC+ +++E++  L+ + +S G+ PT  
Sbjct: 439 KQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQ 498

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY ++  G   + ++  ALK+FE M +     D+ TY   I  LCK   + EA  LF T+
Sbjct: 499 TYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETM 558

Query: 253 GILKCELDIQAYNC------LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
                 LD     C      L    C+  ++ IA+     L +R       T + ++  L
Sbjct: 559 ------LDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKR---QQAHTADALVRKL 609

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
              G +D A     ++ +   A +   + + I+     N+ +   E+  K+ ++
Sbjct: 610 STVGNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNRYALASEISEKISKR 663



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 158/348 (45%), Gaps = 39/348 (11%)

Query: 30  GFVDKAKALFLQMKGENINPDVVTYNSLIH-GLCHANDWNEAKRLFFEMMDQ--GVQPSV 86
           G + +A  + L+++   +   V T N ++  GL H   +  A+  F  M     GV+P  
Sbjct: 122 GRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPDH 181

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
            +F  ++   C+ G+ +EA  LL  M  +    ++ T + ++  FC  G+     +LF  
Sbjct: 182 RSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRR 241

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
           M  MG   + V+Y+  I+G C+   V++A  +  EMV KG+KP V T+ +L  GL +I  
Sbjct: 242 MSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGW 301

Query: 207 VEHALKLF------------------------------------EEMQRDDVAADTSTYN 230
           +E A +LF                                      M    +A +T+TY 
Sbjct: 302 MERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYT 361

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           T I G CK G    A EL   + +     +I  YN +I G CK G+++ A ++ R    +
Sbjct: 362 TLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQ 421

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            L  D VTY I+I   C  G +  A DLF  M E +  P++  + T+I
Sbjct: 422 GLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTII 469


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  193 bits (491), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 184/353 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+N +I+ LC EG  +K+  L  +M+     P +VTYN+++H  C    +  A  L
Sbjct: 231 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 290

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +GV   V T+N+++ +LC++ ++ +   LL  M +R + PN  TY+TL++GF  
Sbjct: 291 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 350

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A +L   M S G   + V++N LI+G+      +EAL ++  M +KG+ P+ V+
Sbjct: 351 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 410

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +  + + A   +  M+R+ V     TY   IDGLCKNG++ EAV L   + 
Sbjct: 411 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 470

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + DI  Y+ LI+G CK GR + A E+   + R  L  + + Y+ +I+  C  G + 
Sbjct: 471 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 530

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +A  ++  M       +   F  L+    +  K ++  E +  M    ++P+ 
Sbjct: 531 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 583



 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 176/362 (48%), Gaps = 1/362 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+Y  ++DGLCK    D A+  +++MK   +    +TY  +I GLC     +EA  L
Sbjct: 406 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 465

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G+ P +VT++ +++  CK G+   A  ++  + +  + PN   YSTL+   C 
Sbjct: 466 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 525

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A  ++ +M   G   D  ++N+L+   CK  +V EA    R M S GI P  V+
Sbjct: 526 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 585

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           ++ L  G     +   A  +F+EM +        TY + + GLCK G++ EA +  ++L 
Sbjct: 586 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +   +D   YN L+  +CKSG L  A+ LF  + +R ++ D  TY  +I GLC  G+  
Sbjct: 646 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705

Query: 314 KAHDLFLDMEENA-VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            A     + E    V PN +++   + G  +  +    I    +M      PD    + +
Sbjct: 706 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 765

Query: 373 VD 374
           +D
Sbjct: 766 ID 767



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 186/366 (50%), Gaps = 6/366 (1%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +C  N   Y+ +I    +EG +  +  +F  M     NP V T N+++  +  + +    
Sbjct: 158 LCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 217

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
                EM+ + + P V TFN++++ LC  G  +++S L+  M +    P   TY+T++  
Sbjct: 218 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +C  G+   A EL   M+S G   D  +YN+LI+  C++  + +   L R+M  + I P 
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            VTYNTL  G     +V  A +L  EM    ++ +  T+N  IDG    G   EA+++F 
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 397

Query: 251 TL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            +   G+   E+   +Y  L+DGLCK+   ++A   +  + R  +    +TY  MI GLC
Sbjct: 398 MMEAKGLTPSEV---SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 454

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            +G +D+A  L  +M ++ + P+++ +  LI+GF ++ +     E++ ++    + P+  
Sbjct: 455 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 514

Query: 368 IVSMVV 373
           I S ++
Sbjct: 515 IYSTLI 520



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 166/344 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T N I+  + K G      +   +M    I PDV T+N LI+ LC    + ++  L
Sbjct: 196 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 255

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   G  P++VT+N ++   CK G+   A  LLD M  + V  +  TY+ L+   C 
Sbjct: 256 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 315

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           + +I +   L   M       ++V+YN LING+    +V  A  L  EM+S G+ P  VT
Sbjct: 316 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 375

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L  G       + ALK+F  M+   +     +Y   +DGLCKN     A   +  + 
Sbjct: 376 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 435

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                +    Y  +IDGLCK+G L+ A+ L   + +  +  D+VTY+ +I+G C  G+  
Sbjct: 436 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 495

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            A ++   +    ++PN II+ TLI+   R+    + I +   M
Sbjct: 496 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 539



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 175/341 (51%), Gaps = 3/341 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TYN +I  LC+   + K   L   M+   I+P+ VTYN+LI+G  +      A +L  EM
Sbjct: 305 TYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM 364

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +  G+ P+ VTFN ++D     G   EA ++  +M  + + P+  +Y  L+DG C   + 
Sbjct: 365 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 424

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A   +  M+  G     ++Y  +I+G CKN  ++EA+ L  EM   GI P +VTY+ L
Sbjct: 425 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 484

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G  ++ + + A ++   + R  ++ +   Y+T I   C+ G + EA+ ++  + +   
Sbjct: 485 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 544

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D   +N L+  LCK+G++  A E  R +    ++ + V+++ +I+G  N G+  KA  
Sbjct: 545 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 604

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVR---INKPSKVIELLH 355
           +F +M +    P    + +L+ G  +   + +  K ++ LH
Sbjct: 605 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 173/362 (47%), Gaps = 1/362 (0%)

Query: 15   NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
            +TV YNT++  +CK G + KA +LF +M   +I PD  TY SLI GLC       A    
Sbjct: 652  DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 711

Query: 75   FEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             E   +G V P+ V +   +D + K G+        + M      P+  T + ++DG+  
Sbjct: 712  KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 771

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             GKI +  +L   M +     +  +YNIL++GY K K+V  +  LYR ++  GI P  +T
Sbjct: 772  MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 831

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
             ++L LG+ E + +E  LK+ +      V  D  T+N  I   C NG I  A +L + + 
Sbjct: 832  CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 891

Query: 254  ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             L   LD    + ++  L ++ R + +  +   + ++ +  +   Y  +I+GLC  G + 
Sbjct: 892  SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 951

Query: 314  KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
             A  +  +M  + + P  +    ++    +  K  +   LL  M + K++P  +  + ++
Sbjct: 952  TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 1011

Query: 374  DL 375
             L
Sbjct: 1012 HL 1013



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 162/329 (49%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P+ VT N +IDG  + G ++K   L  +M  +N  P++ TYN L+HG     D + +  L
Sbjct: 757  PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 816

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            +  ++  G+ P  +T + ++  +C++  ++   ++L   + R V  + +T++ L+   C 
Sbjct: 817  YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 876

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             G+IN A +L   M S+G   D  + + +++   +N   +E+  +  EM  +GI P    
Sbjct: 877  NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRK 936

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            Y  L  GL  +  ++ A  + EEM    +       +  +  L K G   EA  L R + 
Sbjct: 937  YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 996

Query: 254  ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +K    I ++  L+   CK+G +  ALEL   +    L  D+V+YN++I GLC  G M 
Sbjct: 997  KMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMA 1056

Query: 314  KAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
             A +L+ +M+ +    N   +  LI G +
Sbjct: 1057 LAFELYEEMKGDGFLANATTYKALIRGLL 1085



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/399 (22%), Positives = 177/399 (44%), Gaps = 36/399 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNTV+++ +I+G    G   KA ++F +M     +P   TY SL+ GLC      EA++ 
Sbjct: 581 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              +         V +N ++  +CK+G + +A  L   MVQR + P+++TY++L+ G C 
Sbjct: 641 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 700

Query: 134 TGK------INRAEELFGS------------------------------MESMGCKHDDV 157
            GK        +  E  G+                              M+++G   D V
Sbjct: 701 KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIV 760

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           + N +I+GY +  ++E+   L  EM ++   P + TYN L  G  +   V  +  L+  +
Sbjct: 761 TTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSI 820

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
             + +  D  T ++ + G+C++  +   +++ +       E+D   +N LI   C +G +
Sbjct: 821 ILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEI 880

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A +L + +    +  D  T + M+  L  + +  ++  +  +M +  ++P    ++ L
Sbjct: 881 NWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGL 940

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           I+G  R+        +  +M   K+ P     S +V  L
Sbjct: 941 INGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 979



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 120/262 (45%)

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
           R    N   Y  L+  +   G I  + E+F  M   G      + N ++    K+ E   
Sbjct: 157 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 216

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
             S  +EM+ + I P V T+N L   L      E +  L ++M++   A    TYNT + 
Sbjct: 217 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
             CK G    A+EL   +     + D+  YN LI  LC+S R+     L R + +R++  
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 336

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           + VTYN +I+G  N+G++  A  L  +M    ++PN + F  LI G +      + +++ 
Sbjct: 337 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 396

Query: 355 HKMKEKKVMPDASIVSMVVDLL 376
           + M+ K + P      +++D L
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGL 418



 Score = 40.8 bits (94), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 30/49 (61%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGL 61
            K + V+YN +I GLC +G +  A  L+ +MKG+    +  TY +LI GL
Sbjct: 1036 KLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084


>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
 gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
          Length = 886

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 188/365 (51%), Gaps = 1/365 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  ++Y  +I+   K G V KA A+  +M+   I  +  TY+ LI+G  H +D+  A  
Sbjct: 423 KPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFS 482

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +M+  G+QP    +N++++  CK G MD A R+ + M +  ++P+  T+  +++GF 
Sbjct: 483 IFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFA 542

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + G + RA +    M   GC    ++YN LI+G  +  +VE+A+S+  +M   GI P   
Sbjct: 543 VAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEH 602

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  +  G      +  A + F +++   +  D   Y T +   CK+G +  A+ + R +
Sbjct: 603 TYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREM 662

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K   +   YN LIDG  + G +  A +L + +    +  ++ T+   I+  C  G M
Sbjct: 663 SFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDM 722

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD-ASIVSM 371
            +A ++  +M +  + PNV  F TLI G+ R++ P + ++   +MK   + PD A+   +
Sbjct: 723 QRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEAAYHCL 782

Query: 372 VVDLL 376
           V  LL
Sbjct: 783 VTSLL 787



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 170/393 (43%), Gaps = 35/393 (8%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           + KP+   +  ++    K G    A+A F  M+   I P+   + SL+H    A D   A
Sbjct: 246 IPKPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGA 305

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
                EM  +G++ +VVT+++++    K      A  L      +    N   YS ++  
Sbjct: 306 LSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHA 365

Query: 131 FCLTGKINRAEELFGSME------------SM-----------------------GCKHD 155
            C +G ++RAEEL   ME            SM                       G K  
Sbjct: 366 HCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPT 425

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
            +SY  LIN Y K  +V +A+++ +EM S GIK    TY+ L  G   +H   +A  +FE
Sbjct: 426 IISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFE 485

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
           +M +  +  D + YN  ++  CK G +  A+ +F  +   + +   + +  +I+G   +G
Sbjct: 486 DMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAG 545

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
            ++ A +    + R      V+TYN +IHGL    Q++KA  +   M    +APN   + 
Sbjct: 546 DMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYT 605

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            ++ G+       K  E   K+KE  +  D  I
Sbjct: 606 IIMRGYAASGDIGKAFEYFTKIKESGLKLDVYI 638



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 117/234 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  +TYN +I GL ++  V+KA ++  +M    I P+  TY  ++ G   + D  +A 
Sbjct: 562 CAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAF 621

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             F ++ + G++  V  +  ++   CK+G+M  A  +   M  + +  N F Y+ L+DG+
Sbjct: 622 EYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGW 681

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G +  A +L   M+  G   +  ++   IN  CK  +++ A ++ +EM   G+KP V
Sbjct: 682 ARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNV 741

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            T+ TL  G   +   + ALK FEEM+   +  D + Y+  +  L     ++E 
Sbjct: 742 KTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVMEG 795



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 121/261 (46%)

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
           +R  +P+   +  ++  +   G  + A   F +M + G + +   +  L++ Y    ++ 
Sbjct: 244 ERIPKPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMR 303

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
            ALS   EM S+GI+ TVVTY+ L  G  + +  + A  LF+E +      +   Y+  I
Sbjct: 304 GALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNII 363

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
              C++G +  A EL R +     +  I  Y+ ++ G       +  L +F  L      
Sbjct: 364 HAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFK 423

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
             +++Y  +I+     G++ KA  +  +ME + +  N   +  LI+GF+ ++  +    +
Sbjct: 424 PTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSI 483

Query: 354 LHKMKEKKVMPDASIVSMVVD 374
              M +  + PD +I +++V+
Sbjct: 484 FEDMIKSGLQPDRAIYNLLVE 504



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 46/93 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T+ + I+  CK G + +A+ +  +M    + P+V T+ +LI G    +  + A + 
Sbjct: 704 PNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKC 763

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           F EM   G++P    ++ ++  L     + E S
Sbjct: 764 FEEMKSAGLKPDEAAYHCLVTSLLSRATVMEGS 796


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 184/353 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+N +I+ LC EG  +K+  L  +M+     P +VTYN+++H  C    +  A  L
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +GV   V T+N+++ +LC++ ++ +   LL  M +R + PN  TY+TL++GF  
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 310

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A +L   M S G   + V++N LI+G+      +EAL ++  M +KG+ P+ V+
Sbjct: 311 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 370

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +  + + A   +  M+R+ V     TY   IDGLCKNG++ EAV L   + 
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 430

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + DI  Y+ LI+G CK GR + A E+   + R  L  + + Y+ +I+  C  G + 
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +A  ++  M       +   F  L+    +  K ++  E +  M    ++P+ 
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 176/362 (48%), Gaps = 1/362 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V+Y  ++DGLCK    D A+  +++MK   +    +TY  +I GLC     +EA  L
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G+ P +VT++ +++  CK G+   A  ++  + +  + PN   YSTL+   C 
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A  ++ +M   G   D  ++N+L+   CK  +V EA    R M S GI P  V+
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 545

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           ++ L  G     +   A  +F+EM +        TY + + GLCK G++ EA +  ++L 
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +   +D   YN L+  +CKSG L  A+ LF  + +R ++ D  TY  +I GLC  G+  
Sbjct: 606 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665

Query: 314 KAHDLFLDMEENA-VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            A     + E    V PN +++   + G  +  +    I    +M      PD    + +
Sbjct: 666 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 725

Query: 373 VD 374
           +D
Sbjct: 726 ID 727



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 186/366 (50%), Gaps = 6/366 (1%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +C  N   Y+ +I    +EG +  +  +F  M     NP V T N+++  +  + +    
Sbjct: 118 LCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 177

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
                EM+ + + P V TFN++++ LC  G  +++S L+  M +    P   TY+T++  
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +C  G+   A EL   M+S G   D  +YN+LI+  C++  + +   L R+M  + I P 
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            VTYNTL  G     +V  A +L  EM    ++ +  T+N  IDG    G   EA+++F 
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357

Query: 251 TL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            +   G+   E+   +Y  L+DGLCK+   ++A   +  + R  +    +TY  MI GLC
Sbjct: 358 MMEAKGLTPSEV---SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 414

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            +G +D+A  L  +M ++ + P+++ +  LI+GF ++ +     E++ ++    + P+  
Sbjct: 415 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474

Query: 368 IVSMVV 373
           I S ++
Sbjct: 475 IYSTLI 480



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 166/344 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T N I+  + K G      +   +M    I PDV T+N LI+ LC    + ++  L
Sbjct: 156 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 215

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   G  P++VT+N ++   CK G+   A  LLD M  + V  +  TY+ L+   C 
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           + +I +   L   M       ++V+YN LING+    +V  A  L  EM+S G+ P  VT
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L  G       + ALK+F  M+   +     +Y   +DGLCKN     A   +  + 
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                +    Y  +IDGLCK+G L+ A+ L   + +  +  D+VTY+ +I+G C  G+  
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 455

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            A ++   +    ++PN II+ TLI+   R+    + I +   M
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 499



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 175/341 (51%), Gaps = 3/341 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TYN +I  LC+   + K   L   M+   I+P+ VTYN+LI+G  +      A +L  EM
Sbjct: 265 TYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM 324

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +  G+ P+ VTFN ++D     G   EA ++  +M  + + P+  +Y  L+DG C   + 
Sbjct: 325 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 384

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A   +  M+  G     ++Y  +I+G CKN  ++EA+ L  EM   GI P +VTY+ L
Sbjct: 385 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 444

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G  ++ + + A ++   + R  ++ +   Y+T I   C+ G + EA+ ++  + +   
Sbjct: 445 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 504

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             D   +N L+  LCK+G++  A E  R +    ++ + V+++ +I+G  N G+  KA  
Sbjct: 505 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 564

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVR---INKPSKVIELLH 355
           +F +M +    P    + +L+ G  +   + +  K ++ LH
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 173/362 (47%), Gaps = 1/362 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +TV YNT++  +CK G + KA +LF +M   +I PD  TY SLI GLC       A    
Sbjct: 612 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 671

Query: 75  FEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            E   +G V P+ V +   +D + K G+        + M      P+  T + ++DG+  
Sbjct: 672 KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 731

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GKI +  +L   M +     +  +YNIL++GY K K+V  +  LYR ++  GI P  +T
Sbjct: 732 MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 791

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            ++L LG+ E + +E  LK+ +      V  D  T+N  I   C NG I  A +L + + 
Sbjct: 792 CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 851

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            L   LD    + ++  L ++ R + +  +   + ++ +  +   Y  +I+GLC  G + 
Sbjct: 852 SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 911

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  +  +M  + + P  +    ++    +  K  +   LL  M + K++P  +  + ++
Sbjct: 912 TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 971

Query: 374 DL 375
            L
Sbjct: 972 HL 973



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 162/329 (49%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P+ VT N +IDG  + G ++K   L  +M  +N  P++ TYN L+HG     D + +  L
Sbjct: 717  PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 776

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            +  ++  G+ P  +T + ++  +C++  ++   ++L   + R V  + +T++ L+   C 
Sbjct: 777  YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 836

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             G+IN A +L   M S+G   D  + + +++   +N   +E+  +  EM  +GI P    
Sbjct: 837  NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRK 896

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            Y  L  GL  +  ++ A  + EEM    +       +  +  L K G   EA  L R + 
Sbjct: 897  YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 956

Query: 254  ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             +K    I ++  L+   CK+G +  ALEL   +    L  D+V+YN++I GLC  G M 
Sbjct: 957  KMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMA 1016

Query: 314  KAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
             A +L+ +M+ +    N   +  LI G +
Sbjct: 1017 LAFELYEEMKGDGFLANATTYKALIRGLL 1045



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/399 (22%), Positives = 177/399 (44%), Gaps = 36/399 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNTV+++ +I+G    G   KA ++F +M     +P   TY SL+ GLC      EA++ 
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              +         V +N ++  +CK+G + +A  L   MVQR + P+++TY++L+ G C 
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660

Query: 134 TGK------INRAEELFGS------------------------------MESMGCKHDDV 157
            GK        +  E  G+                              M+++G   D V
Sbjct: 661 KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIV 720

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           + N +I+GY +  ++E+   L  EM ++   P + TYN L  G  +   V  +  L+  +
Sbjct: 721 TTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSI 780

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
             + +  D  T ++ + G+C++  +   +++ +       E+D   +N LI   C +G +
Sbjct: 781 ILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEI 840

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A +L + +    +  D  T + M+  L  + +  ++  +  +M +  ++P    ++ L
Sbjct: 841 NWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGL 900

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           I+G  R+        +  +M   K+ P     S +V  L
Sbjct: 901 INGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 939



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 120/262 (45%)

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
           R    N   Y  L+  +   G I  + E+F  M   G      + N ++    K+ E   
Sbjct: 117 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 176

Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
             S  +EM+ + I P V T+N L   L      E +  L ++M++   A    TYNT + 
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
             CK G    A+EL   +     + D+  YN LI  LC+S R+     L R + +R++  
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 296

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           + VTYN +I+G  N+G++  A  L  +M    ++PN + F  LI G +      + +++ 
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356

Query: 355 HKMKEKKVMPDASIVSMVVDLL 376
           + M+ K + P      +++D L
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGL 378



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 30/49 (61%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGL 61
            K + V+YN +I GLC +G +  A  L+ +MKG+    +  TY +LI GL
Sbjct: 996  KLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 198/366 (54%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC P++ T+ ++IDGL + G VD A +L+ +M   +  P+VV Y SLI          + 
Sbjct: 477 VCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDG 536

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            +++ EM+ +G  P ++  N  MD + K G++++   L + +  + + P+  +YS L+ G
Sbjct: 537 HKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHG 596

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
               G      +LF  M+  G   D ++YN +I+G+CK+ +V++A  L  EM +KG++PT
Sbjct: 597 LVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPT 656

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY ++  GL +I +++ A  LFEE +   V  +   Y++ IDG  K G I EA  +  
Sbjct: 657 VVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILE 716

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            L       +   +NCL+D L K+  ++ A   F+++       + +TY+IMI+GLC   
Sbjct: 717 ELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIR 776

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           + +KA   + +M++  + PN I + T+I G  +     +   L  + K    +PD++  +
Sbjct: 777 KFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYN 836

Query: 371 MVVDLL 376
            +++ L
Sbjct: 837 AMIEGL 842



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 201/365 (55%), Gaps = 1/365 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ + YN I+  L ++G V++A  +  +M+ ++  P++ TYN LI  LC A +   A 
Sbjct: 374 CIPSVIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAPNLTTYNILIDMLCKAGELEAAL 432

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++   M + G+ P+++T N+++D LCK  K+DEA  +   +  +   P++ T+ +L+DG 
Sbjct: 433 KVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGL 492

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+++ A  L+  M       + V Y  LI  + K    E+   +Y+EMV +G  P +
Sbjct: 493 GRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDL 552

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +  N+    +F+  +VE    LFEE++   +  D  +Y+  I GL K G+  E  +LF  
Sbjct: 553 MLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYE 612

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +      LD+ AYN +IDG CKSG+++ A +L   +  + L   VVTY  ++ GL    +
Sbjct: 613 MKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDR 672

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +D+A+ LF + +   V  NV+I+ +LI GF ++ +  +   +L ++ +K + P++   + 
Sbjct: 673 LDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNC 732

Query: 372 VVDLL 376
           ++D L
Sbjct: 733 LLDAL 737



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 190/362 (52%), Gaps = 16/362 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ +  N+ +D + K G V+K +ALF ++K + + PDV +Y+ LIHGL  A    E  
Sbjct: 548 CSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETY 607

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +LF+EM +QG+   V+ +N ++D  CK+GK+D+A +LL+ M  + ++P   TY +++DG 
Sbjct: 608 KLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGL 667

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
               +++ A  LF   +S+G   + V Y+ LI+G+ K   ++EA  +  E++ KG+ P  
Sbjct: 668 AKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNS 727

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T+N L   L +  +++ A   F+ M+    + +  TY+  I+GLC      +A   ++ 
Sbjct: 728 YTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQE 787

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + +   Y  +I GL K+G +  A  LF        V D   YN MI GL +   
Sbjct: 788 MQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSS--- 844

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            +KA D ++  EE           T + G  R+N  + V+ LL  + +   +  A+IV  
Sbjct: 845 ANKAMDAYIVFEE-----------TRLKG-CRVNSKTCVV-LLDALHKADCLEQAAIVGA 891

Query: 372 VV 373
           V+
Sbjct: 892 VL 893



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 181/363 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TYN +ID LCK G ++ A  +   MK   + P+++T N +I  LC A   +EA  +
Sbjct: 410 PNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSI 469

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  +  +   P   TF  ++D L + G++D+A  L + M+  D  PN   Y++L+  F  
Sbjct: 470 FLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFK 529

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+     +++  M   GC  D +  N  ++   K  EVE+  +L+ E+ ++G+ P V +
Sbjct: 530 CGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRS 589

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+ L  GL +        KLF EM+   +  D   YNT IDG CK+G + +A +L   + 
Sbjct: 590 YSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMK 649

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +  +  Y  ++DGL K  RL+ A  LF       +  +VV Y+ +I G    G++D
Sbjct: 650 TKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRID 709

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A+ +  ++ +  + PN   +  L+   V+  +  +       MK  K  P+A   S+++
Sbjct: 710 EAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMI 769

Query: 374 DLL 376
           + L
Sbjct: 770 NGL 772



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 178/365 (48%), Gaps = 7/365 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P    Y T+I  L      D    LF QM+      +V  + +L+         + A  
Sbjct: 200 RPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALS 259

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM        +V +NV +D   K GK+D A +    M  + + P+  TY+TL+   C
Sbjct: 260 LLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLC 319

Query: 133 LTGKINRAEELFGSME---SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
              +++ A ELF  ++   S+ C +   +YN +I GY    + +EA SL      KG  P
Sbjct: 320 KARRLDEAVELFEELDLNRSVPCVY---AYNTMIMGYGSAGKFDEAYSLLERQKRKGCIP 376

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
           +V+ YN +   L    +VE AL++ +EM R D A + +TYN  ID LCK G +  A+++ 
Sbjct: 377 SVIAYNCILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELEAALKVQ 435

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
            T+       +I   N +ID LCK+ +L+ A  +F  L  +V   D  T+  +I GL   
Sbjct: 436 DTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRR 495

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
           G++D A+ L+  M ++   PNV+++ +LI  F +  +     ++  +M  +   PD  ++
Sbjct: 496 GRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLL 555

Query: 370 SMVVD 374
           +  +D
Sbjct: 556 NSYMD 560



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 181/368 (49%), Gaps = 5/368 (1%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           EIG   + N   + T++    +EG +D A +L  +MK  +   D+V YN  I        
Sbjct: 231 EIGY--EANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGK 288

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD-LMVQRDVRPNAFTYS 125
            + A + F EM  QG+ P  VT+  ++  LCK  ++DEA  L + L + R V P  + Y+
Sbjct: 289 VDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSV-PCVYAYN 347

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           T++ G+   GK + A  L    +  GC    ++YN ++    +  +VEEAL ++ EM  +
Sbjct: 348 TMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM-RQ 406

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
              P + TYN L   L +  ++E ALK+ + M+   +  +  T N  ID LCK   + EA
Sbjct: 407 DAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEA 466

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             +F  L    C  D + +  LIDGL + GR++ A  L+  +     + +VV Y  +I  
Sbjct: 467 CSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQN 526

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
               G+ +  H ++ +M     +P++++  + +    +  +  K   L  ++K + ++PD
Sbjct: 527 FFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPD 586

Query: 366 ASIVSMVV 373
               S+++
Sbjct: 587 VRSYSILI 594



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 158/332 (47%), Gaps = 1/332 (0%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           M+     P    Y +LI  L  AN  +    LF +M + G + +V  F  ++    + G+
Sbjct: 194 MRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGR 253

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D A  LLD M       +   Y+  +D F   GK++ A + F  M++ G   DDV+Y  
Sbjct: 254 IDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTT 313

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LI   CK + ++EA+ L+ E+      P V  YNT+ +G     + + A  L E  +R  
Sbjct: 314 LIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKG 373

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
                  YN  +  L + G + EA+ +   +       ++  YN LID LCK+G LE AL
Sbjct: 374 CIPSVIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAPNLTTYNILIDMLCKAGELEAAL 432

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           ++  ++    L  +++T NIMI  LC   ++D+A  +FL ++    +P+   F +LI G 
Sbjct: 433 KVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGL 492

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            R  +      L  KM +   +P+  + + ++
Sbjct: 493 GRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLI 524



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 156/328 (47%), Gaps = 3/328 (0%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P+V  YN+ +  +    + +  +++  EM   G   S      ++    K+ K+ EA  +
Sbjct: 133 PEV--YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGV 190

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
           +++M +   RP    Y+TL+       + +    LF  M+ +G + +   +  L+  + +
Sbjct: 191 IEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAR 250

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
              ++ ALSL  EM S      +V YN       ++ +V+ A K F EM+   +  D  T
Sbjct: 251 EGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVT 310

Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
           Y T I  LCK   + EAVELF  L + +    + AYN +I G   +G+ + A  L     
Sbjct: 311 YTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQK 370

Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
           R+  +  V+ YN ++  L   G++++A  +  +M ++A APN+  +  LI    +  +  
Sbjct: 371 RKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA-APNLTTYNILIDMLCKAGELE 429

Query: 349 KVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +++   MKE  + P+   V++++D L
Sbjct: 430 AALKVQDTMKEAGLFPNIMTVNIMIDRL 457


>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
          Length = 618

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 193/360 (53%), Gaps = 1/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+I+    +G V KA  ++ QM    I+P+VVTY ++I+ LC  +   +A+ L
Sbjct: 171 PSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGL 230

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM + G++P++ T+N +M    K   +  A      +++  + PN   ++TL+DG C 
Sbjct: 231 FLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCK 290

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +I  A+ +F  M           YN LI+G  ++   +EAL+ ++E++ K ++P   T
Sbjct: 291 ANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFT 350

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            + +  GL +  Q++ A +  E MQ+  +A + + YN  ID  CK+G + EA+     + 
Sbjct: 351 CSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMS 410

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  E ++  Y+ LIDG  K+G +EIA+ ++  +  + +  +VVTY  +IHG   +G MD
Sbjct: 411 EVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMD 470

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK-EKKVMPDASIVSMV 372
            A  L  +MEE  +  N I    L+ G  R N+    +  + +   +KK   + SI + V
Sbjct: 471 AAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSV 530



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 182/363 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P     N I+DGL K   + +   LF +M G  + P VVTYN+LI+   H  D  +A  +
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           + +M+ + + P+VVT+  ++  LC+   + +A  L   M +  +RPN +TY+ LM     
Sbjct: 196 WDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              I  A   +  +   G   +DV +  LI+G CK   + EA +++ +M    + PTV  
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPV 315

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN+L  G F     + AL  F+E+ R ++  D  T +  + GLC  G +  A      + 
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQ 375

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                L+  AYN LID  CKSG L+ AL     +    +  +VVTY+ +I G   +G+M+
Sbjct: 376 QSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEME 435

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  ++ +M    V PNV+ +  LIHG  +         L  +M+EK +  +A  VS++V
Sbjct: 436 IAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLV 495

Query: 374 DLL 376
           D L
Sbjct: 496 DGL 498



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/323 (33%), Positives = 173/323 (53%), Gaps = 6/323 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V + T+IDGLCK   + +AK +FL M    + P V  YNSLIHG   +    EA   
Sbjct: 276 PNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAF 335

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F E++ + ++P   T ++++  LC  G+M  A+R L++M Q  +  NA  Y+ L+D +C 
Sbjct: 336 FQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCK 395

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G ++ A      M  +G + + V+Y+ LI+G+ KN E+E A+++Y EMV+KG++P VVT
Sbjct: 396 SGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVT 455

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE-LFRTL 252
           Y  L  G  +   ++ A  L +EM+   + ++  T +  +DGLC+   + +AV  +    
Sbjct: 456 YTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYS 515

Query: 253 GILKCELDIQ-----AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           G  K E +        Y  LI GL   G+   A   F  +    +V D  TY ++I GLC
Sbjct: 516 GQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLC 575

Query: 308 NDGQMDKAHDLFLDMEENAVAPN 330
             G +  A  L+ DM +  V P 
Sbjct: 576 MLGYVLNAMMLYADMVKVGVKPT 598



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 180/372 (48%), Gaps = 47/372 (12%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYN------------------ 55
           PN VTY T+I  LC+E  +  A+ LFL+MK   + P++ TYN                  
Sbjct: 206 PNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVF 265

Query: 56  -----------------SLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                            +LI GLC AN   EAK +F +M    V P+V  +N ++    +
Sbjct: 266 YYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFR 325

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           +G   EA      ++++++RP+ FT S ++ G C  G++  A      M+  G   +  +
Sbjct: 326 SGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAA 385

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN+LI+ YCK+  ++EAL     M   G++P VVTY++L  G  +  ++E A+ ++ EM 
Sbjct: 386 YNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMV 445

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCKSG 275
              V  +  TY   I G  KNG +  A  L + +   GI    + +   + L+DGLC+  
Sbjct: 446 AKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITV---SVLVDGLCREN 502

Query: 276 RLEIALELF------RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           R++ A+         +   +   +A+ VTY  +I+GL  DGQ ++A   F  M ++ + P
Sbjct: 503 RVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVP 562

Query: 330 NVIIFVTLIHGF 341
           +   +  +I G 
Sbjct: 563 DRFTYTLVIRGL 574



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 107/190 (56%), Gaps = 8/190 (4%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+GV  +PN VTY+++IDG  K G ++ A A++ +M  + + P+VVTY +LIHG     D
Sbjct: 411 EVGV--EPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGD 468

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR-LLDLMVQRDVR-----PN 120
            + A  L  EM ++G+  + +T +V++D LC+  ++ +A R +++   Q+         N
Sbjct: 469 MDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIAN 528

Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
           + TY TL+ G  + G+ N A   F  M   G   D  +Y ++I G C    V  A+ LY 
Sbjct: 529 SVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYA 588

Query: 181 EMVSKGIKPT 190
           +MV  G+KPT
Sbjct: 589 DMVKVGVKPT 598


>gi|255661036|gb|ACU25687.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 376

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 184/342 (53%), Gaps = 7/342 (2%)

Query: 27  CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           C+ G +D AK ++++M    ++PD V YN+++ G        +   L+ E+M +    +V
Sbjct: 1   CESGDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLW-ELMGRKGSQNV 59

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
           V+FN++M  L  NG++D+A  + +LM +     ++ TY  ++DGFC  G IN++  +   
Sbjct: 60  VSFNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEI 119

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
            E  G   D  +Y+ +ING CK  ++++A+S+   M+  G KP    YNTL  G     +
Sbjct: 120 AEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASK 179

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQA 263
            + A+++F EM   D +    TY+T I+GLCK     EA +L + +   G   C   +  
Sbjct: 180 FDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPC---VIT 236

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
           Y+ L+ GLC+  ++E+AL+L+  +  +    DV  +NI+IHGLC+ G+   A  L+ DM 
Sbjct: 237 YSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMN 296

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
               APN++   TL+ GF +       + +  ++    + PD
Sbjct: 297 HWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRSGLQPD 338



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 167/318 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V++N ++ GL   G VDKA +++  MK      D +TY  +I G C     N++  + 
Sbjct: 58  NVVSFNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVL 117

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
                +G       ++ +++ LCK  K+D+A  +L+ M++   +PNA  Y+TL++GF   
Sbjct: 118 EIAEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGA 177

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            K + A  +F  M SM C    V+Y+ LING CK +   EA  L +EM+ KG KP V+TY
Sbjct: 178 SKFDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITY 237

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + L  GL + H+VE AL+L+ ++       D   +N  I GLC  G    A+ L+  +  
Sbjct: 238 SLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNH 297

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C  ++  +N L++G  K G +  AL ++  + R  L  D+++YNI + GLC+  ++  
Sbjct: 298 WNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRSGLQPDIISYNITLKGLCSCNRISF 357

Query: 315 AHDLFLDMEENAVAPNVI 332
           A     D     + P +I
Sbjct: 358 AILFLHDALTKKIFPTII 375



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 181/351 (51%), Gaps = 1/351 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V YN ++ G  + G +     L+ ++ G   + +VV++N ++ GL    + ++A  +
Sbjct: 23  PDAVVYNAMLIGFLRVGRIKDCFDLW-ELMGRKGSQNVVSFNIMMRGLFDNGEVDKAISI 81

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           +  M   G     +T+ +I+D  CKNG ++++  +L++   +    +AF YS +++G C 
Sbjct: 82  WELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEGKGGVLDAFAYSAMINGLCK 141

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+++A  +   M   GCK +   YN LING+    + ++A+ ++REM S    PT+VT
Sbjct: 142 EAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSPTIVT 201

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+TL  GL +  +   A  L +EM          TY+  + GLC+   +  A++L+  + 
Sbjct: 202 YHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVL 261

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+Q +N LI GLC  G+ + AL L+  +       ++VT+N ++ G   DG + 
Sbjct: 262 SKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIR 321

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            A  ++  +  + + P++I +   + G    N+ S  I  LH    KK+ P
Sbjct: 322 NALVIWARILRSGLQPDIISYNITLKGLCSCNRISFAILFLHDALTKKIFP 372



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 150/284 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +++TY  IIDG CK G+++K+  +    +G+    D   Y+++I+GLC     ++A  + 
Sbjct: 93  DSITYGIIIDGFCKNGYINKSLHVLEIAEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVL 152

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M+  G +P+   +N +++      K D+A R+   M   D  P   TY TL++G C  
Sbjct: 153 NGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSPTIVTYHTLINGLCKG 212

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            + + A +L   M   G K   ++Y++L+ G C+  +VE AL L+ +++SKG KP V  +
Sbjct: 213 ERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMH 272

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L  GL  + + +HAL L+ +M   + A +  T+NT ++G  K+G I  A+ ++  +  
Sbjct: 273 NILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILR 332

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
              + DI +YN  + GLC   R+  A+        + +   ++T
Sbjct: 333 SGLQPDIISYNITLKGLCSCNRISFAILFLHDALTKKIFPTIIT 376



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 120/207 (57%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           NG I   CKPN   YNT+I+G       D A  +F +M   + +P +VTY++LI+GLC  
Sbjct: 153 NGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSPTIVTYHTLINGLCKG 212

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
             ++EA  L  EM+++G +P V+T++++M  LC+  K++ A +L + ++ +  +P+   +
Sbjct: 213 ERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMH 272

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + L+ G C  GK   A  L+  M    C  + V++N L+ G+ K+ ++  AL ++  ++ 
Sbjct: 273 NILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILR 332

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            G++P +++YN    GL   +++  A+
Sbjct: 333 SGLQPDIISYNITLKGLCSCNRISFAI 359



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 139/277 (50%), Gaps = 1/277 (0%)

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           C++G +D A R+   M +  V P+A  Y+ ++ GF   G+I    +L+  M   G   + 
Sbjct: 1   CESGDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKG-SQNV 59

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           VS+NI++ G   N EV++A+S++  M   G     +TY  +  G  +   +  +L + E 
Sbjct: 60  VSFNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEI 119

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
            +      D   Y+  I+GLCK   + +AV +   +    C+ +   YN LI+G   + +
Sbjct: 120 AEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASK 179

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
            + A+ +FR +        +VTY+ +I+GLC   +  +A+DL  +M E    P VI +  
Sbjct: 180 FDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSL 239

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           L+ G  + +K    ++L +++  K   PD  + ++++
Sbjct: 240 LMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILI 276



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 97/182 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  VTY+T+I+GLCK     +A  L  +M  +   P V+TY+ L+ GLC  +    A 
Sbjct: 195 CSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMAL 254

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L+ +++ +G +P V   N+++  LC  GK   A  L   M   +  PN  T++TLM+GF
Sbjct: 255 QLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGF 314

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G I  A  ++  +   G + D +SYNI + G C    +  A+    + ++K I PT+
Sbjct: 315 YKDGDIRNALVIWARILRSGLQPDIISYNITLKGLCSCNRISFAILFLHDALTKKIFPTI 374

Query: 192 VT 193
           +T
Sbjct: 375 IT 376



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 86/172 (50%), Gaps = 1/172 (0%)

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ 262
           E   ++ A +++ EM    V+ D   YN  + G  + G I +  +L+  +G  K   ++ 
Sbjct: 2   ESGDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMG-RKGSQNVV 60

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
           ++N ++ GL  +G ++ A+ ++  + +   V D +TY I+I G C +G ++K+  +    
Sbjct: 61  SFNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIA 120

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           E      +   +  +I+G  +  K  K + +L+ M +    P+A + + +++
Sbjct: 121 EGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLIN 172


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 197/423 (46%), Gaps = 71/423 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K     YN++I+G CK+G +D+A+ L   M  E + P   +Y+ LI GLC   D + A  
Sbjct: 405 KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAME 464

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM ++G+  +  TF  +++  CK+ KMDEA+RL D M+  +V PN  T++ +++G+C
Sbjct: 465 LHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYC 524

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA----------------- 175
           L G I +A +L+  M  MG K D+ +Y  LI+G C    V +A                 
Sbjct: 525 LVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNF 584

Query: 176 ------------------LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
                               L+ EM  +G+K  +V++  +     + H  E +  LF EM
Sbjct: 585 SLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM 644

Query: 218 QRDDVAAD-----------------------------------TSTYNTFIDGLCKNGYI 242
           +   V  D                                   T T+   I+ LCK+GY+
Sbjct: 645 KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYL 704

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
             A  L + +       +   YNC +D     G +E A +L  ++ +  L A +V++NI+
Sbjct: 705 GSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHL-ASIVSFNIL 763

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I GLC  G++ +A DL   + E+  +P+ I + T+IH   ++   +K  EL ++M  K +
Sbjct: 764 IKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGL 823

Query: 363 MPD 365
            PD
Sbjct: 824 KPD 826



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 175/333 (52%), Gaps = 2/333 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G++G+V  PN   YN +ID LCK    D A  LF +M G  + P+ VTY  LIH LC   
Sbjct: 330 GDLGMV--PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG 387

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
              +A  LF +M D+G++ +V  +N +++  CK G +D A  LL  MV+  + P A +YS
Sbjct: 388 MIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYS 447

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+ G C  G ++ A EL   M   G   ++ ++  LING+CK+K+++EA  L+ +M+  
Sbjct: 448 PLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDS 507

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            + P  VT+N +  G   +  +  A +L+++M    +  D  TY + I GLC    + +A
Sbjct: 508 NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKA 567

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            E    L      L+  +   L+ GL + GR      L+  +  R +  D+V++ I+++ 
Sbjct: 568 NEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYA 627

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
                  +K+  LF +M+E  V P+ I +  +I
Sbjct: 628 ALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 660



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 192/363 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+    + +ID L K+  V++A +L  ++    + P+V  YN+LI  LC    +++A RL
Sbjct: 301 PSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRL 360

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM  +G++P+ VT+ +++  LCK G +++A  L D M  + ++   + Y++L++G+C 
Sbjct: 361 FKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCK 420

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++RA  L   M   G      SY+ LI G C+N ++  A+ L+REM  +GI     T
Sbjct: 421 QGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYT 480

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  G  +  +++ A +LF++M   +V  +  T+N  I+G C  G I +A +L+  + 
Sbjct: 481 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 540

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  + D   Y  LI GLC +  +  A E    L     V +  +   +++GL  +G+  
Sbjct: 541 EMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFT 600

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           + + L+ +M    V  +++ F  +++  ++ +   K   L  +MKE+ V PD    + ++
Sbjct: 601 ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 660

Query: 374 DLL 376
           D L
Sbjct: 661 DAL 663



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 186/365 (50%), Gaps = 1/365 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V YN ++ GLCK   V +A  +   M    +  D VTY +L++G C   +   A R
Sbjct: 230 KASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALR 289

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M+  G  PS    + ++DEL K   ++EA  L   +    + PN F Y+ L+D  C
Sbjct: 290 ITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLC 349

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              + + A+ LF  M   G + ++V+Y ILI+  CK   +E+AL L+ +M  KGIK TV 
Sbjct: 350 KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN+L  G  +   ++ A  L   M ++ +    ++Y+  I GLC+NG +  A+EL R +
Sbjct: 410 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREM 469

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +   +  LI+G CK  +++ A  LF  +    ++ + VT+N+MI G C  G +
Sbjct: 470 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNI 529

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK-KVMPDASIVSM 371
            KA  L+  M E  + P+   + +LI G    +  SK  E +  ++    V+ + S+ ++
Sbjct: 530 RKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTAL 589

Query: 372 VVDLL 376
           +  L 
Sbjct: 590 LYGLF 594



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 171/353 (48%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY  +I  LCK G ++ A  LF +M+ + I   V  YNSLI+G C     + A+ 
Sbjct: 370 EPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARG 429

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+ +G+ P+  +++ ++  LC+NG +  A  L   M +R +  N +T++ L++GFC
Sbjct: 430 LLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFC 489

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K++ A  LF  M       ++V++N++I GYC    + +A  LY +MV  G+KP   
Sbjct: 490 KDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNY 549

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY +L  GL     V  A +   +++      +  +    + GL + G   E   L+  +
Sbjct: 550 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEM 609

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +   +LD+ ++  ++    K    E +  LFR +  + +  D + Y  MI  L  +  M
Sbjct: 610 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 669

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +A + +  M  +  +PN +    LI+   +         L  +M    V+P+
Sbjct: 670 IQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPN 722



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 179/360 (49%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T + I+  L K      A+ LF +M    ++ D   Y + I   C + + + A+ L 
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M  +GV+ S V +NV+M  LCKN ++ EA  + ++MV   V  +  TY TL+ GFC  
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            ++  A  +   M  +G    + + + +I+   K + VEEA SL  ++   G+ P V  Y
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L   L +  + + A +LF+EM    +  +  TY   I  LCK G I +A+ LF  +  
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              ++ +  YN LI+G CK G L+ A  L   + +  L     +Y+ +I GLC +G +  
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A +L  +M E  +A N   F  LI+GF +  K  +   L  KM +  V+P+    +++++
Sbjct: 462 AMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521



 Score =  140 bits (353), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 168/363 (46%), Gaps = 38/363 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC------HANDW 67
           PN VT+N +I+G C  G + KA  L+ QM    + PD  TY SLI GLC       AN++
Sbjct: 511 PNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEF 570

Query: 68  -----------------------------NEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                                         E   L+ EM  +GV+  +V+F +I+    K
Sbjct: 571 VADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALK 630

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
               +++  L   M ++ V+P+   Y+ ++D       + +A   +  M   G   + V+
Sbjct: 631 QHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVT 690

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH-QVEHALKLFEEM 217
           + +LIN  CK+  +  A  L +EM++  + P   TYN  FL  F     +E A  L   M
Sbjct: 691 HTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNC-FLDYFATEGDMEKAKDLHSAM 749

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
            +  +A+  S +N  I GLCK G I EA++L R +       D  +Y+ +I  LCK G +
Sbjct: 750 LQGHLASIVS-FNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDI 808

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A EL+  +  + L  DVV YNI I      G+ DKA  ++ +M  + V PN   +  L
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868

Query: 338 IHG 340
           + G
Sbjct: 869 LSG 871



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 148/296 (50%)

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +  G+  +  T + I+  L K  +   A  L D M+Q  V  + + Y+  +  +C +  +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  L   MES G K   V YN+L+ G CKN  V+EA+ +   MV+ G+    VTY TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G   + ++E AL++  +M R       +  +  ID L K   + EA  L   LG L  
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             ++ AYN LID LCK+ R + A  LF+ +  R L  + VTY I+IH LC  G ++ A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           LF  M +  +   V  + +LI+G+ +     +   LL  M ++ + P A+  S ++
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 104/188 (55%), Gaps = 1/188 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNTVT+  +I+ LCK G++  A+ L  +M   N+ P+  TYN  +       D  +AK L
Sbjct: 686 PNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDL 745

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+ QG   S+V+FN+++  LCK GK+ EA  L+  + +    P+  +YST++   C 
Sbjct: 746 HSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCK 804

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G IN+A EL+  M   G K D V+YNI I     + E ++AL +Y  M+  G++P   T
Sbjct: 805 MGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDT 864

Query: 194 YNTLFLGL 201
           Y  L  G+
Sbjct: 865 YRALLSGI 872



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 168/356 (47%), Gaps = 19/356 (5%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V++  I+    K+   +K+  LF +MK + + PD + Y  +I  L    +  +A  
Sbjct: 615 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN 674

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            + +M+  G  P+ VT  V+++ LCK+G +  A  L   M+  +V PN FTY+  +D F 
Sbjct: 675 CWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 734

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G + +A++L  +M   G     VS+NILI G CK  +++EA+ L R++   G  P  +
Sbjct: 735 TEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCI 793

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y+T+   L ++  +  A +L+ EM    +  D   YN FI     +G   +A+ ++  +
Sbjct: 794 SYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNM 853

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + +   Y  L+ G+  S  L      FR   + + ++    Y +M      D   
Sbjct: 854 IRSGVQPNWDTYRALLSGI--SLMLHYDFSCFRGTKQYIQIS---VYELM------DSTH 902

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           +K+H     ++++     ++ F        R+NK   VI     +K KK+ P   +
Sbjct: 903 NKSHRRIWFVDDHKSGEIILEFDG------RLNKWG-VISFRSDVKVKKLSPGPQV 951



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 105/290 (36%), Gaps = 70/290 (24%)

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
           +L L +   +  N +T S ++       +   A +LF  M   G   D+  Y   I  YC
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           +++ ++ A  L   M S+G+K + V                                   
Sbjct: 210 ESRNLDGARGLVVRMESEGVKASAVP---------------------------------- 235

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
            YN  + GLCKN  + EAVE+   +  +    D   Y  L+ G C+   LE+AL +   +
Sbjct: 236 -YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDM 294

Query: 288 PR-----------------------------------RVLVADVVTYNIMIHGLCNDGQM 312
            R                                     +V +V  YN +I  LC + + 
Sbjct: 295 IRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERF 354

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           D A  LF +M    + PN + +  LIH   +       + L  KM++K +
Sbjct: 355 DDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 404


>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Glycine max]
          Length = 583

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 188/367 (51%), Gaps = 9/367 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+++  N +I+   + G VD+A  +F +MK     P   TYN+LI G   A    E+ +
Sbjct: 89  KPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMK 148

Query: 73  LFFEMM--DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           L  EMM  D+ V+P+  T+N+++   C   K++EA  +L  MV   ++P+  TY+T+   
Sbjct: 149 LL-EMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARA 207

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G+  RAE L   M     K ++ +  I+I+GYCK   + EAL     M   G+ P 
Sbjct: 208 YAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPN 267

Query: 191 VVTYNTLFLGLF---EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            V +N+L  G     + + V+ AL L EE     +  D  T++T ++     G +    E
Sbjct: 268 PVVFNSLIKGYLDTTDTNGVDEALTLMEEF---GIKPDVVTFSTIMNAWSSAGLMENCEE 324

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +F  +     E DI AY+ L  G  ++G+   A  L  S+ +  +  +VV +  +I G C
Sbjct: 325 IFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWC 384

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G+MD+A  L   M E   +PN+  + TLI G+    +P K  ELL  M+E+ V+P+ S
Sbjct: 385 AAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMS 444

Query: 368 IVSMVVD 374
            + +V D
Sbjct: 445 TMQLVAD 451



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 178/357 (49%), Gaps = 7/357 (1%)

Query: 22  IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG 81
           +++ L  +G   +A+A+F  +  E   P ++TY +L+  L     +     L  ++ D G
Sbjct: 28  LMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNG 87

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
           ++P  +  N +++   ++GK+DEA ++   M +   +P   TY+TL+ GF + G   R  
Sbjct: 88  MKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAG---RPY 144

Query: 142 ELFGSMESMG----CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           E    +E MG     K +D +YNILI  +C  K++EEA ++  +MV+ GI+P VVTYNT+
Sbjct: 145 ESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTM 204

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
                +  + E A +L  +M  + V  +  T    I G CK G + EA+     +  L  
Sbjct: 205 ARAYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGV 264

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           + +   +N LI G   +       E    +    +  DVVT++ +++   + G M+   +
Sbjct: 265 DPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEE 324

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +F DM +  + P++  +  L  G+VR  +P K   LL  M +  V P+  I + ++ 
Sbjct: 325 IFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIIS 381



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 155/323 (47%), Gaps = 9/323 (2%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKG--ENINPDVVTYNSLIHGLCHANDWNE 69
           CKP T TYNT+I G    G   ++  L L+M G  EN+ P+  TYN LI   C      E
Sbjct: 123 CKPTTSTYNTLIKGFGIAGRPYESMKL-LEMMGQDENVKPNDRTYNILIQAWCTKKKLEE 181

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  +  +M+  G+QP VVT+N +     +NG+ + A RL+  M    V+PN  T   ++ 
Sbjct: 182 AWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKMPYNIVKPNERTCGIIIS 241

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE---VEEALSLYREMVSKG 186
           G+C  G +  A      M+ +G   + V +N LI GY    +   V+EAL+L  E    G
Sbjct: 242 GYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEF---G 298

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           IKP VVT++T+         +E+  ++F +M +  +  D   Y+    G  + G   +A 
Sbjct: 299 IKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAE 358

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            L  ++     + ++  +  +I G C +G+++ A  L   +       ++ TY  +I G 
Sbjct: 359 ALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGY 418

Query: 307 CNDGQMDKAHDLFLDMEENAVAP 329
               Q  KA +L   MEE  V P
Sbjct: 419 GEAKQPWKAEELLTTMEERGVVP 441



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 144/314 (45%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN  TYN +I   C +  +++A  +  +M    I PDVVTYN++        +   A+R
Sbjct: 160 KPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAER 219

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M    V+P+  T  +I+   CK G M EA R L  M +  V PN   +++L+ G+ 
Sbjct: 220 LILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYL 279

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            T   N  +E    ME  G K D V+++ ++N +     +E    ++ +MV  GI+P + 
Sbjct: 280 DTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIH 339

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ L  G     Q   A  L   M +  V  +   + T I G C  G +  A  L   +
Sbjct: 340 AYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKM 399

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +    +++ Y  LI G  ++ +   A EL  ++  R +V ++ T  ++       G  
Sbjct: 400 HEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGLF 459

Query: 313 DKAHDLFLDMEENA 326
            +A+ +    EE +
Sbjct: 460 KEANRILNGSEEES 473



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 110/235 (46%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           + KPN  T   II G CKEG + +A     +MK   ++P+ V +NSLI G     D N  
Sbjct: 228 IVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGV 287

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
                 M + G++P VVTF+ IM+     G M+    + + MV+  + P+   YS L  G
Sbjct: 288 DEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKG 347

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G+  +AE L  SM   G + + V +  +I+G+C   +++ A  L  +M   G  P 
Sbjct: 348 YVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPN 407

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           + TY TL  G  E  Q   A +L   M+   V  + ST     D     G   EA
Sbjct: 408 LKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGLFKEA 462


>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
          Length = 484

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 175/340 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    +N ++  + + G +  A+ +F +M    + P VVT+N+L+ G+C A+D N A  L
Sbjct: 112 PEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANAL 171

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   G+ P V T+   +  LCK G++ +A  + + M +R + PN    +TL+D  C 
Sbjct: 172 RGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCK 231

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +    EL   M + G K D V+YN L+NG+C+ ++++ A  +  EM   G+KP  VT
Sbjct: 232 EGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVT 291

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G  +  +++ A+++ +EM  + VA D  TY   I GL K G  V+A  +   + 
Sbjct: 292 YTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMM 351

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D   Y  +ID  CK+G ++   +  + +  +     +VTYN++++G C+ GQM 
Sbjct: 352 EAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMK 411

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            A  L   M    V PN I +  L+ G  +  K     EL
Sbjct: 412 NADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEEL 451



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 171/343 (49%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           V +A A +L +    + P+   +N L+  +  +     A+ +F EM+ +GVQP+VVTFN 
Sbjct: 95  VPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNT 154

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +M  +CK   ++ A+ L  LM +  + P+ +TY   + G C TG+I  A E+F  M   G
Sbjct: 155 LMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG 214

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
              + V    LI+ +CK  +V   L L  EM ++G+K  +V YN L  G   +  ++ A 
Sbjct: 215 LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAAN 274

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            + EEM++D +  D  TY T IDG CK G +  A+E+ + +      LD   Y  LI GL
Sbjct: 275 DIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGL 334

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
            K+GR   A  +   +    L  D  TY ++I   C +G +        +M+     P +
Sbjct: 335 SKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGI 394

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + +  +++GF  + +      LL+ M    V P+    ++++D
Sbjct: 395 VTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLD 437



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 164/331 (49%), Gaps = 3/331 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VT+NT++ G+CK   ++ A AL   M    I PDV TY + I GLC      +A  
Sbjct: 146 QPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAME 205

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM ++G+ P+ V    ++D  CK G +     L   M  R V+ +   Y+ L++GFC
Sbjct: 206 MFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFC 265

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +  A ++   M   G K D V+Y  LI+G CK  E++ A+ + +EM  +G+    V
Sbjct: 266 RVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDV 325

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L  GL +  +   A ++  EM    +  D +TY   ID  CKNG +    +  + +
Sbjct: 326 TYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEM 385

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   I  YN +++G C  G+++ A  L  ++    +  + +TYNI++ G C  G++
Sbjct: 386 QNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKV 445

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
               +L        +  +  ++ +LI+ FV+
Sbjct: 446 RDTEEL---KSAKGMVSDFGVYTSLINEFVK 473


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 176/354 (49%), Gaps = 4/354 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNEAK 71
           KPN  T+  +IDGLCK+G+ +KA  LFL++ + +N  P+V TY  +I+G C     N A+
Sbjct: 330 KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAE 389

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L   M +QG+ P+  T+  ++D  CK G    A  L+DLM +    PN FTY+ ++DG 
Sbjct: 390 MLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGL 449

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+   A +L       G   D V+Y ILI+ +C+  + ++AL+++  M   G++P +
Sbjct: 450 CKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDM 509

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN L        +VE + KLFEE     +     TY + I G C++G+I  A++ F  
Sbjct: 510 HTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHK 569

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ D   Y  LI GLC   +L+ A +L+ ++    L    VT   + +  C  G 
Sbjct: 570 MRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGD 629

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
              A  +   +E+      V    TLI       K        HK+ +K +  D
Sbjct: 630 SATAMIILERLEKKLWIRTV---NTLIRKLCSEKKVGVAALFFHKLLDKDLNVD 680



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 174/383 (45%), Gaps = 36/383 (9%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH------ANDW------ 67
           N +ID     GFVD A+ +F +M    + PD  +Y  ++ G C        + W      
Sbjct: 197 NFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIE 256

Query: 68  -----------------------NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDE 104
                                  N A   F + +  G+ P+++ F+ +++ LCK G + +
Sbjct: 257 RGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQ 316

Query: 105 ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM-ESMGCKHDDVSYNILI 163
           A  +L+ MV++  +PN +T++ L+DG C  G   +A  LF  +  S   K +  +Y  +I
Sbjct: 317 AFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMI 376

Query: 164 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVA 223
           NGYCK +++  A  L   M  +G+ P   TY  L  G  +      A +L + M ++   
Sbjct: 377 NGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFT 436

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL 283
            +  TYN  IDGLCK G   EA +L R         D   Y  LI   C+    + AL +
Sbjct: 437 PNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAI 496

Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           F  + +  L  D+ TYN++I   C   +++++  LF +     + P    + ++I G+ R
Sbjct: 497 FSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCR 556

Query: 344 INKPSKVIELLHKMKEKKVMPDA 366
               S  I+  HKM++    PD+
Sbjct: 557 DGHISSAIKFFHKMRDYGCKPDS 579



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 150/305 (49%), Gaps = 1/305 (0%)

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A+++F EM+D+ V P   ++ +++   C+ G++ +  R L  M++R    +  T + ++ 
Sbjct: 212 AEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMIS 271

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
            F   G +NRA   F     MG   + ++++ LING CK   +++A  +  EMV KG KP
Sbjct: 272 TFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKP 331

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQR-DDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
            V T+  L  GL +    E A +LF ++ R D+   +  TY   I+G CK   +  A  L
Sbjct: 332 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEML 391

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +       +   Y CLIDG CK+G    A EL   + +     ++ TYN +I GLC 
Sbjct: 392 LIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCK 451

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G+  +A+ L     ++ +  + + +  LI  F R     + + +  +M +  + PD   
Sbjct: 452 KGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHT 511

Query: 369 VSMVV 373
            ++++
Sbjct: 512 YNVLI 516



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 151/318 (47%), Gaps = 5/318 (1%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
           +  +N++        ++          EA  +  EM + G+       N ++D     G 
Sbjct: 149 LNNDNLDRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGF 208

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           +D A ++ D M+ R V P++ +Y  ++ G+C  G+I+  +     M   G   D+ +  +
Sbjct: 209 VDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTL 268

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           +I+ + +   V  A   +++ V  G+ P ++ +++L  GL +I  ++ A ++ EEM R  
Sbjct: 269 MISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKG 328

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE---LDIQAYNCLIDGLCKSGRLE 278
              +  T+   IDGLCK G+  +A  LF  L +++ +    ++  Y C+I+G CK  +L 
Sbjct: 329 WKPNVYTHTALIDGLCKKGWTEKAFRLF--LKLVRSDNYKPNVYTYTCMINGYCKEEKLN 386

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A  L   +  + LV +  TY  +I G C  G   +A++L   M +    PN+  +  +I
Sbjct: 387 RAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAII 446

Query: 339 HGFVRINKPSKVIELLHK 356
            G  +  +  +  +LL +
Sbjct: 447 DGLCKKGRFPEAYKLLRR 464



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 6/181 (3%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G+   P   TY ++I G C++G +  A   F +M+     PD +TY +LI GLC+ +  
Sbjct: 536 VGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKL 595

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR-DVRPNAFTYST 126
           +EA +L+  M+D G+ P  VT   +  E CK G    A  +L+ + ++  +R    T +T
Sbjct: 596 DEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWIR----TVNT 651

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+   C   K+  A   F  +       D ++        C        +S   E +SKG
Sbjct: 652 LIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLAAFTTA-CYESNKFALVSDLSERISKG 710

Query: 187 I 187
           I
Sbjct: 711 I 711



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%)

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ 262
           EI +++ A+ +  EMQ   +       N  ID     G++  A ++F  +       D  
Sbjct: 170 EIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDST 229

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
           +Y  ++ G C+ GR+       + +  R    D  T  +MI      G +++A   F   
Sbjct: 230 SYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKW 289

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +  + PN+I F +LI+G  +I    +  E+L +M  K   P+    + ++D L
Sbjct: 290 VQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGL 343


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 191/357 (53%), Gaps = 1/357 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY+ ++  LCK G  D AK +F  M+ + I PD      L+         + AK    E+
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
              G++ S   +N +++ L K   +DEA  L    ++    P+ ++++ L+ G C  G+I
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE-MVSKGIKPTVVTYNT 196
           ++A E F +M + GC  D VSYN LING+C+  E+ +   L +E M+ KG+ P V+TY +
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  G  ++  ++ A +LF+EM    +  +  T+N  IDG  K G +  A+ ++  + +L 
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
           C  D+  +  LIDG C+ G +   L+L+  +  R L  +V TY ++I+ LC + ++ +A 
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +    ++ + V P   I+  +I GF +  K  +   ++ +M+EKK  PD    ++++
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILI 467



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 158/306 (51%), Gaps = 1/306 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  ++N +I GLC+ G +DKA   F  M      PD+V+YN+LI+G C  N+ ++   L
Sbjct: 212 PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDL 271

Query: 74  FFE-MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             E M+ +GV P V+T+  I+   CK G M  AS L D MV   ++PN FT++ L+DGF 
Sbjct: 272 LKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFG 331

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  ++  M  +GC  D V++  LI+GYC+  EV + L L+ EM  + + P V 
Sbjct: 332 KVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVY 391

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L   L + +++  A      ++  +V      YN  IDG CK G + EA  +   +
Sbjct: 392 TYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEM 451

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              KC  D   +  LI G C  GR+  A+  F  +     V D +T N +I  L   G  
Sbjct: 452 QEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMP 511

Query: 313 DKAHDL 318
           ++A  +
Sbjct: 512 NEASQI 517



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 183/349 (52%), Gaps = 1/349 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +   YN +++ L K+  VD+A  LF +       PDV ++N LI GLC   + ++A  
Sbjct: 176 KVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFE 235

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDVRPNAFTYSTLMDGF 131
            F  M + G  P +V++N +++  C+  ++ +   LL + M+ + V P+  TY++++ G+
Sbjct: 236 FFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGY 295

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A ELF  M S G K +D ++N+LI+G+ K   +  A+ +Y +M+  G  P V
Sbjct: 296 CKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDV 355

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+ +L  G     +V   LKL+EEM+  +++ +  TY   I+ LCK   I EA    R 
Sbjct: 356 VTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRH 415

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L   +       YN +IDG CK+G+++ A  +   +  +    D +T+ I+I G C  G+
Sbjct: 416 LKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGR 475

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           M +A   F  M E    P+ I   +LI   ++   P++  ++     +K
Sbjct: 476 MVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 137/265 (51%), Gaps = 1/265 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQ-MKGENINPDVVTYNSLIHGLCHANDWNEA 70
           C P+ V+YNT+I+G C+   + K   L  + M  + ++PDV+TY S+I G C   D   A
Sbjct: 245 CFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAA 304

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             LF EM+  G++P+  TFNV++D   K G M  A  + + M+     P+  T+++L+DG
Sbjct: 305 SELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDG 364

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +C  G++N+  +L+  M+      +  +Y +LIN  CK   + EA +  R + S  + P 
Sbjct: 365 YCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPK 424

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
              YN +  G  +  +V+ A  +  EMQ      D  T+   I G C  G +VEA+  F 
Sbjct: 425 PFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFY 484

Query: 251 TLGILKCELDIQAYNCLIDGLCKSG 275
            +  + C  D    N LI  L K+G
Sbjct: 485 KMIEINCVPDEITINSLISCLLKAG 509



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 96/174 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT+ ++IDG C+EG V++   L+ +MK  N++P+V TY  LI+ LC  N   EA+
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                +    V P    +N ++D  CK GK+DEA+ ++  M ++  RP+  T++ L+ G 
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           C+ G++  A   F  M  + C  D+++ N LI+   K     EA  + +  + K
Sbjct: 471 CMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 1/230 (0%)

Query: 146 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 205
           S   +   H   +Y++L+   CK    + A  ++  M S GI P       L      + 
Sbjct: 99  SRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMG 158

Query: 206 QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYN 265
           +++ A     E+    +      YN  ++ L K   + EAV LFR         D+ ++N
Sbjct: 159 KLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFN 218

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL-DMEE 324
            LI GLC+ G ++ A E F+++       D+V+YN +I+G C   ++ K HDL   DM  
Sbjct: 219 ILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLI 278

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             V+P+VI + ++I G+ ++       EL  +M    + P+    ++++D
Sbjct: 279 KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLID 328


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 191/357 (53%), Gaps = 1/357 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY+ ++  LCK G  D AK +F  M+ + I PD      L+         + AK    E+
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
              G++ S   +N +++ L K   +DEA  L    ++    P+ ++++ L+ G C  G+I
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE-MVSKGIKPTVVTYNT 196
           ++A E F +M + GC  D VSYN LING+C+  E+ +   L +E M+ KG+ P V+TY +
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  G  ++  ++ A +LF+EM    +  +  T+N  IDG  K G +  A+ ++  + +L 
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
           C  D+  +  LIDG C+ G +   L+L+  +  R L  +V TY ++I+ LC + ++ +A 
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +    ++ + V P   I+  +I GF +  K  +   ++ +M+EKK  PD    ++++
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILI 467



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 158/306 (51%), Gaps = 1/306 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  ++N +I GLC+ G +DKA   F  M      PD+V+YN+LI+G C  N+ ++   L
Sbjct: 212 PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDL 271

Query: 74  FFE-MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             E M+ +GV P V+T+  I+   CK G M  AS L D MV   ++PN FT++ L+DGF 
Sbjct: 272 LKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFG 331

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  ++  M  +GC  D V++  LI+GYC+  EV + L L+ EM  + + P V 
Sbjct: 332 KVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVY 391

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L   L + +++  A      ++  +V      YN  IDG CK G + EA  +   +
Sbjct: 392 TYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEM 451

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              KC  D   +  LI G C  GR+  A+  F  +     V D +T N +I  L   G  
Sbjct: 452 QEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMP 511

Query: 313 DKAHDL 318
           ++A  +
Sbjct: 512 NEASQI 517



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 183/349 (52%), Gaps = 1/349 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K +   YN +++ L K+  VD+A  LF +       PDV ++N LI GLC   + ++A  
Sbjct: 176 KVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFE 235

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDVRPNAFTYSTLMDGF 131
            F  M + G  P +V++N +++  C+  ++ +   LL + M+ + V P+  TY++++ G+
Sbjct: 236 FFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGY 295

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A ELF  M S G K +D ++N+LI+G+ K   +  A+ +Y +M+  G  P V
Sbjct: 296 CKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDV 355

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VT+ +L  G     +V   LKL+EEM+  +++ +  TY   I+ LCK   I EA    R 
Sbjct: 356 VTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRH 415

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L   +       YN +IDG CK+G+++ A  +   +  +    D +T+ I+I G C  G+
Sbjct: 416 LKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGR 475

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           M +A   F  M E    P+ I   +LI   ++   P++  ++     +K
Sbjct: 476 MVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 137/265 (51%), Gaps = 1/265 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQ-MKGENINPDVVTYNSLIHGLCHANDWNEA 70
           C P+ V+YNT+I+G C+   + K   L  + M  + ++PDV+TY S+I G C   D   A
Sbjct: 245 CFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAA 304

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             LF EM+  G++P+  TFNV++D   K G M  A  + + M+     P+  T+++L+DG
Sbjct: 305 SELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDG 364

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +C  G++N+  +L+  M+      +  +Y +LIN  CK   + EA +  R + S  + P 
Sbjct: 365 YCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPK 424

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
              YN +  G  +  +V+ A  +  EMQ      D  T+   I G C  G +VEA+  F 
Sbjct: 425 PFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFY 484

Query: 251 TLGILKCELDIQAYNCLIDGLCKSG 275
            +  + C  D    N LI  L K+G
Sbjct: 485 KMIEINCVPDEITINSLISCLLKAG 509



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 96/174 (55%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VT+ ++IDG C+EG V++   L+ +MK  N++P+V TY  LI+ LC  N   EA+
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
                +    V P    +N ++D  CK GK+DEA+ ++  M ++  RP+  T++ L+ G 
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           C+ G++  A   F  M  + C  D+++ N LI+   K     EA  + +  + K
Sbjct: 471 CMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 1/230 (0%)

Query: 146 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 205
           S   +   H   +Y++L+   CK    + A  ++  M S GI P       L      + 
Sbjct: 99  SRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMG 158

Query: 206 QVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYN 265
           +++ A     E+    +      YN  ++ L K   + EAV LFR         D+ ++N
Sbjct: 159 KLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFN 218

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL-DMEE 324
            LI GLC+ G ++ A E F+++       D+V+YN +I+G C   ++ K HDL   DM  
Sbjct: 219 ILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLI 278

Query: 325 NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             V+P+VI + ++I G+ ++       EL  +M    + P+    ++++D
Sbjct: 279 KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLID 328


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/330 (33%), Positives = 176/330 (53%), Gaps = 11/330 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    YN  +  LCK G V +A  +   MK     PDVVT+N+LI GLC A   +EA+++
Sbjct: 52  PTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQV 111

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G   ++VT+N +++ L   G+  EA  ++  M      P+  TY+ ++ GFC 
Sbjct: 112 LDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMT---TTPDTQTYNAIIHGFCK 168

Query: 134 TGKINRAEELFGSMESM----GCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIK 188
           +G+I+RA   +G +E M    GC  D  +Y+ILING CK+  + +A  L +EM+  K   
Sbjct: 169 SGEIDRA---YGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCC 225

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
            +VV +NTL  G  +   ++ A +L   M     A D  TY+T IDGLC+ G + +   L
Sbjct: 226 ASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFAL 285

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +    C+ D+  Y  L+ GLCK+G++  A  L + +       + VTY+++  GLC 
Sbjct: 286 LEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCK 345

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
             ++D A+DL   + +     +V+ F TL+
Sbjct: 346 IDKLDMANDLLTSIRDKGRVTDVVAFETLL 375



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 176/351 (50%), Gaps = 6/351 (1%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           TY  ++   C  G +  A  L  +M+ +  + P    YN  +H LC +    EA  +   
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M D   +P VVTFN ++  LCK G++DEA ++LD M +     N  TY+TL++G    G 
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG- 138

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYN 195
             R+ E    M+ M    D  +YN +I+G+CK+ E++ A     EM  + G  P   TY+
Sbjct: 139 --RSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 196 TLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            L  GL +   +  A +L +EM  R D  A    +NT +DG CK   +  A EL  ++  
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C  D+  Y+ +IDGLC+ G ++    L   +  R    DVVTY +++ GLC  G+M +
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           A  L   M E+   PN + +  +  G  +I+K     +LL  +++K  + D
Sbjct: 317 ACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTD 367



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/295 (35%), Positives = 159/295 (53%), Gaps = 5/295 (1%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
            CKP+ VT+NT+I GLCK G +D+A+ +  +M+      ++VTYN+LI+GL  A    EA
Sbjct: 84  ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA 143

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR-DVRPNAFTYSTLMD 129
                 M      P   T+N I+   CK+G++D A   L+ M QR    P+ FTYS L++
Sbjct: 144 ---VLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILIN 200

Query: 130 GFCLTGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           G C +  + +A+EL   M     C    V++N L++GYCK ++++ A  L   M+  G  
Sbjct: 201 GLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCA 260

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTY+T+  GL     V+    L E+M       D  TY   + GLCK G +VEA  L
Sbjct: 261 PDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRL 320

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
            + +    C  +   Y+ + DGLCK  +L++A +L  S+  +  V DVV +  ++
Sbjct: 321 VKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 167/330 (50%), Gaps = 6/330 (1%)

Query: 50  DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRL 108
           D  TY  L+   C A +   A  L  EM  Q G+ P+   +N  +  LCK+GK+ EA  +
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
           +  M     +P+  T++TL+ G C  G+++ A+++   ME  G   + V+YN LING   
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTS 227
                EA+ + + M +    P   TYN +  G  +  +++ A    EEM QR   + DT 
Sbjct: 137 AGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTL-GILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
           TY+  I+GLCK+  + +A EL + + G   C   + A+N L+DG CK+  L+ A EL  S
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +       DVVTY+ +I GLC  G +DK   L   M      P+V+ +  L+ G  +  K
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +   L+ +M E    P+A   S+V D L
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGL 343



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 123/227 (54%), Gaps = 2/227 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDW 67
           G+   P+T TYN II G CK G +D+A     +MK     +PD  TY+ LI+GLC +++ 
Sbjct: 149 GMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNL 208

Query: 68  NEAKRLFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            +A  L  EM+ +     SVV FN ++D  CK   +D A  LL  M++    P+  TYST
Sbjct: 209 RKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYST 268

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++DG C  G +++   L   M S GCK D V+Y +L+ G CK  ++ EA  L + M+  G
Sbjct: 269 IIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDG 328

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
             P  VTY+ +F GL +I +++ A  L   ++      D   + T +
Sbjct: 329 CTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 108/191 (56%), Gaps = 1/191 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKG-ENINPDVVTYNSLIHGLCHANDWNEA 70
           C P+T TY+ +I+GLCK   + KA  L  +M G ++    VV +N+L+ G C A D + A
Sbjct: 188 CSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRA 247

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           + L   M++ G  P VVT++ I+D LC+ G +D+   LL+ MV R  +P+  TY+ L+ G
Sbjct: 248 RELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTG 307

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  GK+  A  L   M   GC  + V+Y+++ +G CK  +++ A  L   +  KG    
Sbjct: 308 LCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTD 367

Query: 191 VVTYNTLFLGL 201
           VV + TL L +
Sbjct: 368 VVAFETLLLSV 378


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 191/365 (52%), Gaps = 8/365 (2%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TY T+I GLCK+G +D+A  L  +M+   + P VVTYN LI+G    +   +   L
Sbjct: 151 PDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFEL 210

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +GV+P+ VT+NV++    K GKMD A   L  M +    P+  T++TL +G+C 
Sbjct: 211 IDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCK 270

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+++ A  +   M   G K + V+ N +++  C  +++++A  L      +G     V+
Sbjct: 271 AGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVS 330

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL +G F++ +       ++EM+  ++     TY T I GLC++G   ++++    L 
Sbjct: 331 YGTLIMGYFKVGKSXX----WDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELL 386

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D   YN +I G C+ G+++ A      + ++    D+ T NI++ GLC +G +D
Sbjct: 387 ESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLD 446

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA----SIV 369
           KA  LF        A + + F T+I G     +  +  +LL +M+EKK+ PD     +I+
Sbjct: 447 KALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAIL 506

Query: 370 SMVVD 374
           S + D
Sbjct: 507 SALAD 511



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 189/359 (52%), Gaps = 4/359 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           NT T+N +I G C E  + +A  L  +MK  +  PD V+YN+++  LC     NEA+ L 
Sbjct: 47  NTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLL 106

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M + G+ P+  TFN+++   CK G + EA+ ++D+M + +V P+  TY+TL+ G C  
Sbjct: 107 LDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKD 166

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GKI+ A  L   ME++      V+YN+LING  +     +   L  EM  KG+KP  VTY
Sbjct: 167 GKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTY 226

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N +     +  ++++A     +M+    + D  T+NT  +G CK G + EA  +   +  
Sbjct: 227 NVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSR 286

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              +++    N ++  LC   +L+ A +L  S  +R    D V+Y  +I G    G+   
Sbjct: 287 KGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGK--- 343

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
               + +M+E  + P++I + T+I G  R  K  + I+  +++ E  ++PD +  + ++
Sbjct: 344 -SXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTII 401



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 174/355 (49%), Gaps = 7/355 (1%)

Query: 13  KPNTVTYNTIIDGLCK---EGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           KPN +T NT+I  L +   +  V  +KA+F  +    +  +  T+N LI G C  N  +E
Sbjct: 7   KPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSE 66

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A  L  +M      P  V++N I+D LCK GK++EA  LL  M    + PN  T++ L+ 
Sbjct: 67  AIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVS 126

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+C  G +  A E+   M       D  +Y  LI G CK+ +++EA  L  EM +  + P
Sbjct: 127 GYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLP 186

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VVTYN L  G FE        +L +EM+   V  +  TYN  +    K G +  A    
Sbjct: 187 HVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNEL 246

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           R +       D   +N L +G CK+GRL  A  +   + R+ L  + VT N ++H LC +
Sbjct: 247 RKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGE 306

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            ++D A+ L     +     + + + TLI G+ ++ K     E    MKEK+++P
Sbjct: 307 RKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDE----MKEKEIIP 357



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 176/389 (45%), Gaps = 54/389 (13%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G   KPN VTYN ++    KEG +D A     +M+    +PD VT+N+L +G C A   +
Sbjct: 216 GKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLS 275

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL------------------- 109
           EA R+  EM  +G++ + VT N I+  LC   K+D+A +LL                   
Sbjct: 276 EAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLI 335

Query: 110 ------------DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
                       D M ++++ P+  TY T++ G C +GK +++ +    +   G   D  
Sbjct: 336 MGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQT 395

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +YN +I GYC+  +V++A     +MV K  KP + T N L  GL     ++ ALKLF+  
Sbjct: 396 TYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTW 455

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
                A D  T+NT I GLC+ G   EA +L   +   K   D   +N ++  L  +GR+
Sbjct: 456 ISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRM 515

Query: 278 EIALELFRSLPRRVLVAD-----------------------VVTYNIMIHGLCNDGQMDK 314
           + A E    +  +  + D                        V ++  I+ LC  G+   
Sbjct: 516 KEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKD 575

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           A  +  +  +  +  +   +++L+ G ++
Sbjct: 576 AMHMIQESTQKGIILHKSTYISLMEGLIK 604



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 153/298 (51%), Gaps = 3/298 (1%)

Query: 82  VQPSVVTFNVIMDELCKNGKMDE---ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           ++P+++T N ++  L +         +  +   +++  V  N  T++ L+ G C+  K++
Sbjct: 6   LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLS 65

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A  L G M+   C  D+VSYN +++  CK  ++ EA  L  +M + G+ P   T+N L 
Sbjct: 66  EAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILV 125

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            G  ++  ++ A ++ + M R++V  D  TY T I GLCK+G I EA  L   +  LK  
Sbjct: 126 SGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLL 185

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
             +  YN LI+G  +        EL   +  + +  + VTYN+++     +G+MD A + 
Sbjct: 186 PHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNE 245

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              MEE+  +P+ + F TL +G+ +  + S+   ++ +M  K +  ++  ++ ++  L
Sbjct: 246 LRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTL 303


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 193/393 (49%), Gaps = 44/393 (11%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V+Y T+I  +C+ G V + + L      E   P V  YN+LI+GLC  +D+  A 
Sbjct: 212 CCPDAVSYTTVISSMCEVGLVKEGREL-----AERFEPVVSVYNALINGLCKEHDYKGAF 266

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT-------- 123
            L  EM+++G+ P+V++++ +++ LC +G+++ A   L  M++R   PN +T        
Sbjct: 267 ELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGC 326

Query: 124 ----------------------------YSTLMDGFCLTGKINRAEELFGSMESMGCKHD 155
                                       Y+TL+ GFC  G I +A  +F  ME +GC  +
Sbjct: 327 FLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPN 386

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
             +Y  LING+ K   ++ A+ ++ +M++ G  P VV Y  +   L    + + A  L E
Sbjct: 387 IRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIE 446

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL-KCELDIQAYNCLIDGLCKS 274
            M +++ A    T+N FI GLC  G +  A ++FR +    +C  +I  YN L+DGL K+
Sbjct: 447 IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKA 506

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            R+E A  L R +  R +     TYN ++HG CN G    A  L   M  +  +P+ I  
Sbjct: 507 NRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITM 566

Query: 335 VTLIHGFVRINKPSKVIELLHKMK--EKKVMPD 365
             +I  + +  K  +  ++L  +    +K  PD
Sbjct: 567 NMIILAYCKQGKAERAAQMLDLVSCGRRKWRPD 599



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 166/354 (46%), Gaps = 6/354 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+   YN ++D L  E  +     ++  MK +   P+V TYN L+  LC  N  + AK
Sbjct: 142 CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAK 201

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  EM ++G  P  V++  ++  +C+ G + E   L +        P    Y+ L++G 
Sbjct: 202 KLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAE-----RFEPVVSVYNALINGL 256

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C       A EL   M   G   + +SY+ LIN  C + ++E A S   +M+ +G  P +
Sbjct: 257 CKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNI 316

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            T ++L  G F       AL L+ +M R   +  +   YNT + G C +G IV+AV +F 
Sbjct: 317 YTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFS 376

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +  + C  +I+ Y  LI+G  K G L+ A+ ++  +       +VV Y  M+  LC   
Sbjct: 377 HMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHS 436

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           +  +A  L   M +   AP+V  F   I G     +     ++  +M+++   P
Sbjct: 437 KFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 164/314 (52%), Gaps = 4/314 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G   +PN V YNT++ G C  G + KA ++F  M+    +P++ TY SLI+G       +
Sbjct: 345 GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLD 404

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A  ++ +M+  G  P+VV +  +++ LC++ K  EA  L+++M + +  P+  T++  +
Sbjct: 405 GAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFI 464

Query: 129 DGFCLTGKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
            G C  G+++ AE++F  ME    C  + V+YN L++G  K   +EEA  L RE+  +G+
Sbjct: 465 KGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGV 524

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           + +  TYNTL  G         AL+L  +M  D  + D  T N  I   CK G    A +
Sbjct: 525 EWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQ 584

Query: 248 LFR--TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
           +    + G  K   D+ +Y  +I GLC+S   E  + L   +    +V  + T++++I+ 
Sbjct: 585 MLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINC 644

Query: 306 LCNDGQMDKAHDLF 319
              D  + +AHD F
Sbjct: 645 FILD-DIVRAHDQF 657



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 175/370 (47%), Gaps = 16/370 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K   +T+  +I  L  +G VD  + L  QMK +  +     + S+I           A  
Sbjct: 73  KHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVE 132

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR-----PNAFTYSTL 127
           +F+ + + G  PSV  +N ++D L    ++      +  MV RD++     PN FTY+ L
Sbjct: 133 MFYRIKEFGCDPSVKIYNHVLDTLLGENRIQ-----MIYMVYRDMKRDGFEPNVFTYNVL 187

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +   C   K++ A++L   M + GC  D VSY  +I+  C+   V+E     RE+  +  
Sbjct: 188 LKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG----RELAER-F 242

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P V  YN L  GL + H  + A +L  EM    ++ +  +Y+T I+ LC +G I  A  
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV-LVADVVTYNIMIHGL 306
               +    C  +I   + L+ G    G    AL+L+  + R   L  +VV YN ++ G 
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C+ G + KA  +F  MEE   +PN+  + +LI+GF +       + + +KM      P+ 
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422

Query: 367 SIVSMVVDLL 376
            + + +V+ L
Sbjct: 423 VVYTNMVEAL 432



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/236 (20%), Positives = 99/236 (41%), Gaps = 31/236 (13%)

Query: 172 VEEALSLYREMVSKGI-KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
           V  AL  ++ + +  + K T +T+  +   L    QV+    L ++M+          + 
Sbjct: 56  VPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFI 115

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           + I    + G    AVE+F  +    C+  ++ YN ++D L    R+++   ++R + R 
Sbjct: 116 SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRD 175

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT-------------- 336
               +V TYN+++  LC + ++D A  L ++M      P+ + + T              
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG 235

Query: 337 ----------------LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                           LI+G  + +      EL+ +M EK + P+    S ++++L
Sbjct: 236 RELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVL 291


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 190/363 (52%), Gaps = 5/363 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V+Y T+I  LCK G V +A+ L +     +  P V  YN+LI+G+C    + EA 
Sbjct: 212 CDPDEVSYTTLISSLCKLGKVKEARELAM-----SFTPSVPVYNALINGVCKEYTFEEAF 266

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  EMM++G+ P+V+++  I++ L   G ++ +  +L  M  R   PN  T+++L+ GF
Sbjct: 267 QLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGF 326

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            L G  + A + +  M   G   + V+YN L++G C  + + +A+S++ +M   G  P V
Sbjct: 327 FLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNV 386

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY+ L  G  +   ++ A +++  M       +   Y   +D LC+N    +A  L   
Sbjct: 387 RTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIEN 446

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +  C  +   +N  I GLC SGR++ A+++F  +       +  TYN ++  L  D +
Sbjct: 447 MQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRR 506

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
             +A  L  DME   +  N++ + T+I+G+       + +ELL KM  +   PDA  V++
Sbjct: 507 FGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNI 566

Query: 372 VVD 374
           V+D
Sbjct: 567 VID 569



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 180/359 (50%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+ +   P+   YN +I+G+CKE   ++A  L  +M  + I+P+V++Y ++I+ L  A +
Sbjct: 237 ELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGN 296

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
              +  +  +M  +G  P++ TF  ++      G   EA    D M++  V PN   Y+ 
Sbjct: 297 VELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNA 356

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           LM G C    +  A  +F  ME  GC  +  +Y+ LI+GY K  +++ A  ++  M++ G
Sbjct: 357 LMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHG 416

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
             P VV Y  +   L        A  L E MQ ++   +T T+NTFI GLC +G +  A+
Sbjct: 417 CHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAI 476

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           ++F  +G   C  +   YN L+D L K  R   A  L + +  R +  ++VTYN +I+G 
Sbjct: 477 KVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGY 536

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           C  G + +A +L   M      P+ I    +I  + +  K +  I+L+ ++   K  PD
Sbjct: 537 CCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPD 595



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 181/360 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN ++Y TII+ L   G V+ + A+  +M     +P++ T+ SLI G       +EA   
Sbjct: 279 PNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDF 338

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           +  M+ +GV P+VV +N +M  LC    + +A  + + M      PN  TYS L+DG+  
Sbjct: 339 WDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAK 398

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A E++  M + GC  + V+Y  +++  C+N    +A  L   M  +   P  VT
Sbjct: 399 AGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVT 458

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +NT   GL    +V+ A+K+F++M       +T+TYN  +D L K+    EA  L + + 
Sbjct: 459 FNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDME 518

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               EL++  YN +I G C +G L  ALEL   +  R    D +T NI+I   C  G+++
Sbjct: 519 HRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVN 578

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L   +      P++I + +LI G        + I  L +M  + + P+ +  +++V
Sbjct: 579 IAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638



 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 163/327 (49%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T+ ++I G   +G   +A   + +M  E + P+VV YN+L+HGLC      +A 
Sbjct: 312 CSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAV 371

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F +M   G  P+V T++ ++D   K G +D AS + + M+     PN   Y+ ++D  
Sbjct: 372 SVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVL 431

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C     N+A  L  +M+   C  + V++N  I G C +  V+ A+ ++ +M + G  P  
Sbjct: 432 CRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNT 491

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN L   L +  +   A  L ++M+   +  +  TYNT I G C  G + EA+EL   
Sbjct: 492 TTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGK 551

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +   + D    N +ID  CK G++ IA++L   L       D++ Y  +I G+C    
Sbjct: 552 MVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIG 611

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLI 338
           +++A      M    ++PNV  +  L+
Sbjct: 612 VEEAIVYLRRMLSEGISPNVATWNVLV 638



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 171/364 (46%), Gaps = 5/364 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP    YN I+D L  E        ++  MK + + P+V TYN L+  LC  N  + A +
Sbjct: 143 KPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHK 202

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  +G  P  V++  ++  LCK GK+ EA  L          P+   Y+ L++G C
Sbjct: 203 LLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVC 257

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                  A +L   M + G   + +SY  +IN       VE +L++  +M ++G  P + 
Sbjct: 258 KEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLH 317

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+ +L  G F       AL  ++ M R+ V  +   YN  + GLC    + +AV +F  +
Sbjct: 318 TFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQM 377

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            I  C  +++ Y+ LIDG  K+G L+ A E++  +       +VV Y  M+  LC +   
Sbjct: 378 EINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMF 437

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A+ L  +M+     PN + F T I G     +    I++  +M      P+ +  + +
Sbjct: 438 NQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497

Query: 373 VDLL 376
           +D L
Sbjct: 498 LDSL 501



 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 168/329 (51%), Gaps = 5/329 (1%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GVV  PN V YN ++ GLC +  +  A ++F QM+     P+V TY++LI G   A D +
Sbjct: 346 GVV--PNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLD 403

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A  ++  M+  G  P+VV +  ++D LC+N   ++A  L++ M   +  PN  T++T +
Sbjct: 404 GASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFI 463

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C +G+++ A ++F  M + GC  +  +YN L++   K++   EA  L ++M  +GI+
Sbjct: 464 KGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIE 523

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
             +VTYNT+  G      +  AL+L  +M       D  T N  ID  CK G +  A++L
Sbjct: 524 LNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQL 583

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI-HGLC 307
              L   K   DI AY  LI G+C    +E A+   R +    +  +V T+N+++ H   
Sbjct: 584 MDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFS 643

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           N G        FLD         V++ +T
Sbjct: 644 NMGHSGAVQ--FLDASSIMQPKFVVLIIT 670



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 173/364 (47%), Gaps = 5/364 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K   +TY  +I+ L  E  +D  + L  QMK E I+     + S+I     A    +A +
Sbjct: 73  KHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALK 132

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F+ M D  V+P+V  +N I+D L    +    + +   M +  + PN FTY+ L+   C
Sbjct: 133 TFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALC 192

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +++ A +L   M S GC  D+VSY  LI+  CK  +V+EA    RE+ +    P+V 
Sbjct: 193 KNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA----REL-AMSFTPSVP 247

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN L  G+ + +  E A +L +EM    +  +  +Y T I+ L   G +  ++ +   +
Sbjct: 248 VYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKM 307

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  ++  +  LI G    G    AL+ +  + R  +V +VV YN ++HGLC+   +
Sbjct: 308 FARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSL 367

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A  +F  ME N   PNV  +  LI G+ +        E+ + M      P+    + +
Sbjct: 368 GDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCM 427

Query: 373 VDLL 376
           VD+L
Sbjct: 428 VDVL 431



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 41/265 (15%)

Query: 137 INRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEV----------------------- 172
           I  A E F S+  S   KH  ++Y ++I      +E+                       
Sbjct: 56  ITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFI 115

Query: 173 ------------EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
                       E+AL  +  M    +KPTV  YN +   L + ++ +    ++  M++D
Sbjct: 116 SVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKD 175

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            +  +  TYN  +  LCKN  +  A +L   +    C+ D  +Y  LI  LCK G+++ A
Sbjct: 176 GMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA 235

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            EL  S    V V     YN +I+G+C +   ++A  L  +M    + PNVI + T+I+ 
Sbjct: 236 RELAMSFTPSVPV-----YNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINA 290

Query: 341 FVRINKPSKVIELLHKMKEKKVMPD 365
                     + +L KM  +   P+
Sbjct: 291 LSDAGNVELSLAVLAKMFARGCSPN 315



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/184 (21%), Positives = 90/184 (48%), Gaps = 1/184 (0%)

Query: 171 EVEEALSLYREMV-SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
           ++  AL  ++ +  SK  K T +TY  +   L    +++    L ++M+ + ++     +
Sbjct: 55  DITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLF 114

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
            + I    + G   +A++ F  +   + +  ++ YN ++D L    R ++   ++ ++ +
Sbjct: 115 ISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKK 174

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
             +  +V TYNI++  LC + ++D AH L ++M      P+ + + TLI    ++ K  +
Sbjct: 175 DGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKE 234

Query: 350 VIEL 353
             EL
Sbjct: 235 AREL 238


>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 193/393 (49%), Gaps = 32/393 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P++  YN +I G C+    D A  + L+MK    +PDVVTYN LI  LC     + A ++
Sbjct: 144 PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKV 203

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++++    P+V+T+ ++++    +G +D+A RLLD M+ R ++P+ +TY+ ++ G C 
Sbjct: 204 MDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCK 263

Query: 134 TGKINRA--------------------------------EELFGSMESMGCKHDDVSYNI 161
            G ++RA                                E L   M   GC+ + V+Y++
Sbjct: 264 RGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSV 323

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LI+  C++ +  EA+ + R M  KG+ P    Y+ L     +  +V+ A+   ++M    
Sbjct: 324 LISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAG 383

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              D   YNT +  LCK G   EA+ +F+ L  + C  +  +YN +   L  SG    AL
Sbjct: 384 WLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRAL 443

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            +   +    +  D +TYN +I  LC DG +D+A  L +DME     P VI +  ++ G 
Sbjct: 444 TMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGL 503

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            + ++    IE+L  M +    P+ +  +++V+
Sbjct: 504 CKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVE 536



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 175/376 (46%), Gaps = 32/376 (8%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYN +I  LC  G +D A  +  Q+  +N NP V+TY  LI         ++A RL
Sbjct: 179 PDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRL 238

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA---------------------------- 105
             EMM +G+QP + T+NVI+  +CK G +D A                            
Sbjct: 239 LDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGR 298

Query: 106 ----SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
                RL+  M+ +   PN  TYS L+   C  GK   A ++   M+  G   D   Y+ 
Sbjct: 299 WEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDP 358

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LI+ +CK  +V+ A+    +M+S G  P +V YNT+   L +  + + AL +F++++   
Sbjct: 359 LISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVG 418

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
              + S+YNT    L  +G  + A+ +   +     + D   YN LI  LC+ G ++ A+
Sbjct: 419 CPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAI 478

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            L   + R      V++YNI++ GLC   ++  A ++   M +N   PN   +  L+ G 
Sbjct: 479 GLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGV 538

Query: 342 VRINKPSKVIELLHKM 357
                 S  +EL   +
Sbjct: 539 GYAGWRSYAVELAKSL 554



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 164/339 (48%), Gaps = 32/339 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH-------- 63
           C P  +TY  +I+     G +D A  L  +M    + PD+ TYN ++ G+C         
Sbjct: 212 CNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAF 271

Query: 64  ------------------------ANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKN 99
                                      W   +RL  +M+ +G +P++VT++V++  LC++
Sbjct: 272 EFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRD 331

Query: 100 GKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
           GK  EA  +L +M ++ + P+A+ Y  L+  FC  GK++ A      M S G   D V+Y
Sbjct: 332 GKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNY 391

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           N ++   CK    +EAL++++++   G  P   +YNT+F  L+       AL +  EM  
Sbjct: 392 NTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEMLS 451

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
           + V  D  TYN+ I  LC++G + EA+ L   +   + +  + +YN ++ GLCK+ R+  
Sbjct: 452 NGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVD 511

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
           A+E+   +       +  TY +++ G+   G    A +L
Sbjct: 512 AIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVEL 550



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 128/241 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN VTY+ +I  LC++G   +A  +   MK + +NPD   Y+ LI   C     + A 
Sbjct: 314 CEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAI 373

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
               +M+  G  P +V +N IM  LCK G+ DEA  +   + +    PNA +Y+T+    
Sbjct: 374 GFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGAL 433

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
             +G   RA  +   M S G   D ++YN LI+  C++  V+EA+ L  +M     +PTV
Sbjct: 434 WSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTV 493

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           ++YN + LGL + H++  A+++   M  +    + +TY   ++G+   G+   AVEL ++
Sbjct: 494 ISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVELAKS 553

Query: 252 L 252
           L
Sbjct: 554 L 554



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 80/342 (23%), Positives = 156/342 (45%), Gaps = 33/342 (9%)

Query: 58  IHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV 117
           ++ LC    + EA     +M+ +G +P V+    ++  L  + + ++A R+++++ Q   
Sbjct: 84  LNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYG- 142

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
            P++F Y+ ++ GFC + + + A  +   M+  G   D V+YNILI   C   +++ AL 
Sbjct: 143 DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALK 202

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           +  +++     PTV+TY  L         ++ A++L +EM    +  D  TYN  + G+C
Sbjct: 203 VMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMC 262

Query: 238 KNGYIVEAVELFRTLG--------------------------------ILKCELDIQAYN 265
           K G +  A E    L                                 +  CE +I  Y+
Sbjct: 263 KRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYS 322

Query: 266 CLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN 325
            LI  LC+ G+   A+++ R +  + L  D   Y+ +I   C +G++D A     DM   
Sbjct: 323 VLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISA 382

Query: 326 AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
              P+++ + T++    +  +  + + +  K++E    P+AS
Sbjct: 383 GWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNAS 424



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 82/151 (54%), Gaps = 2/151 (1%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+G  C PN  +YNT+   L   G   +A  + L+M    ++PD +TYNSLI  LC    
Sbjct: 416 EVG--CPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGM 473

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            +EA  L  +M     QP+V+++N+++  LCK  ++ +A  +L +MV    +PN  TY+ 
Sbjct: 474 VDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTL 533

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           L++G    G  + A EL  S+ SM     D+
Sbjct: 534 LVEGVGYAGWRSYAVELAKSLVSMNAISQDL 564


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 183/351 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VT N +I+  C  G +  + ++  ++      P+ +T  +L+ GLC   +  ++  
Sbjct: 84  EPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVH 143

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
              +++ QG Q + V++  +++ LCK G+   A + L ++       N   Y+T++DG C
Sbjct: 144 FHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLC 203

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +N A + +  M + G   + ++Y  LI G+C   ++  A SL  EM+ K I P V 
Sbjct: 204 KDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVY 263

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L   L +  +V+ A  L  EM      AD  TY + +DG CKN  + +A  LF  +
Sbjct: 264 TYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKM 323

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + +   Y  LIDGLCK GRL+ A +LF+ L  +    DV TYN+MI GLC +G +
Sbjct: 324 KEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGML 383

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           D+A  +   ME+N   PNV+ F  +I    + ++  K  +LLH+M  K ++
Sbjct: 384 DEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGLL 434



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 145/293 (49%)

Query: 84  PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEEL 143
           P +V F  I+  L K      A  L   M  + + PN  T + L++ FC  G+++ +  +
Sbjct: 50  PPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSV 109

Query: 144 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 203
            G +  +G + + ++   L+ G C   EV++++  + ++V++G +   V+Y TL  GL +
Sbjct: 110 LGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCK 169

Query: 204 IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQA 263
           I +   A+K    ++      +   YNT IDGLCK+  + EA + +  +       ++  
Sbjct: 170 IGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVIT 229

Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
           Y  LI G C +G+L  A  L   +  + +  +V TY I+I  LC +G++ +A +L  +M 
Sbjct: 230 YTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMH 289

Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                 +V+ + +L+ GF +     K   L  KMKE  + P+    + ++D L
Sbjct: 290 YRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGL 342



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 45/71 (63%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +  TYN +I GLCKEG +D+A A+  +M+     P+VVT+  +I  L   ++ ++A+
Sbjct: 363 CCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAE 422

Query: 72  RLFFEMMDQGV 82
           +L  EM+ +G+
Sbjct: 423 KLLHEMIAKGL 433


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 190/363 (52%), Gaps = 5/363 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V+Y T+I  LCK G V +A+ L +     +  P V  YN+LI+G+C    + EA 
Sbjct: 212 CDPDEVSYTTLISSLCKLGKVKEARELAM-----SFTPSVPVYNALINGVCKEYTFEEAF 266

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  EMM++G+ P+V+++  I++ L   G ++ +  +L  M  R   PN  T+++L+ GF
Sbjct: 267 QLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGF 326

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            L G  + A + +  M   G   + V+YN L++G C  + + +A+S++ +M   G  P V
Sbjct: 327 FLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNV 386

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY+ L  G  +   ++ A +++  M       +   Y   +D LC+N    +A  L   
Sbjct: 387 RTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIEN 446

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +  C  +   +N  I GLC SGR++ A+++F  +       +  TYN ++  L  D +
Sbjct: 447 MQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRR 506

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
             +A  L  DME   +  N++ + T+I+G+       + +ELL KM  +   PDA  V++
Sbjct: 507 FGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNI 566

Query: 372 VVD 374
           V+D
Sbjct: 567 VID 569



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 180/359 (50%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+ +   P+   YN +I+G+CKE   ++A  L  +M  + I+P+V++Y ++I+ L  A +
Sbjct: 237 ELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGN 296

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
              +  +  +M  +G  P++ TF  ++      G   EA    D M++  V PN   Y+ 
Sbjct: 297 VELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNA 356

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           LM G C    +  A  +F  ME  GC  +  +Y+ LI+GY K  +++ A  ++  M++ G
Sbjct: 357 LMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHG 416

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
             P VV Y  +   L        A  L E MQ ++   +T T+NTFI GLC +G +  A+
Sbjct: 417 CHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAI 476

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           ++F  +G   C  +   YN L+D L K  R   A  L + +  R +  ++VTYN +I+G 
Sbjct: 477 KVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGY 536

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           C  G + +A +L   M      P+ I    +I  + +  K +  I+L+ ++   K  PD
Sbjct: 537 CCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPD 595



 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 181/360 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN ++Y TII+ L   G V+ + A+  +M     +P++ T+ SLI G       +EA   
Sbjct: 279 PNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDF 338

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           +  M+ +GV P+VV +N +M  LC    + +A  + + M      PN  TYS L+DG+  
Sbjct: 339 WDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAK 398

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++ A E++  M + GC  + V+Y  +++  C+N    +A  L   M  +   P  VT
Sbjct: 399 AGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVT 458

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +NT   GL    +V+ A+K+F++M       +T+TYN  +D L K+    EA  L + + 
Sbjct: 459 FNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDME 518

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               EL++  YN +I G C +G L  ALEL   +  R    D +T NI+I   C  G+++
Sbjct: 519 HRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVN 578

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L   +      P++I + +LI G        + I  L +M  + + P+ +  +++V
Sbjct: 579 IAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 163/328 (49%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  T+ ++I G   +G   +A   + +M  E + P+VV YN+L+HGLC      +A 
Sbjct: 312 CSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAV 371

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F +M   G  P+V T++ ++D   K G +D AS + + M+     PN   Y+ ++D  
Sbjct: 372 SVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVL 431

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C     N+A  L  +M+   C  + V++N  I G C +  V+ A+ ++ +M + G  P  
Sbjct: 432 CRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNT 491

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN L   L +  +   A  L ++M+   +  +  TYNT I G C  G + EA+EL   
Sbjct: 492 TTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGK 551

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +   + D    N +ID  CK G++ IA++L   L       D++ Y  +I G+C    
Sbjct: 552 MVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIG 611

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           +++A      M    ++PNV  +  L+ 
Sbjct: 612 VEEAIVYLRRMLSEGISPNVATWNVLVR 639



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 171/364 (46%), Gaps = 5/364 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP    YN I+D L  E        ++  MK + + P+V TYN L+  LC  N  + A +
Sbjct: 143 KPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHK 202

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM  +G  P  V++  ++  LCK GK+ EA  L          P+   Y+ L++G C
Sbjct: 203 LLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVC 257

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                  A +L   M + G   + +SY  +IN       VE +L++  +M ++G  P + 
Sbjct: 258 KEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLH 317

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+ +L  G F       AL  ++ M R+ V  +   YN  + GLC    + +AV +F  +
Sbjct: 318 TFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQM 377

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            I  C  +++ Y+ LIDG  K+G L+ A E++  +       +VV Y  M+  LC +   
Sbjct: 378 EINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMF 437

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           ++A+ L  +M+     PN + F T I G     +    I++  +M      P+ +  + +
Sbjct: 438 NQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497

Query: 373 VDLL 376
           +D L
Sbjct: 498 LDSL 501



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 158/298 (53%), Gaps = 2/298 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GVV  PN V YN ++ GLC +  +  A ++F QM+     P+V TY++LI G   A D +
Sbjct: 346 GVV--PNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLD 403

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
            A  ++  M+  G  P+VV +  ++D LC+N   ++A  L++ M   +  PN  T++T +
Sbjct: 404 GASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFI 463

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
            G C +G+++ A ++F  M + GC  +  +YN L++   K++   EA  L ++M  +GI+
Sbjct: 464 KGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIE 523

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
             +VTYNT+  G      +  AL+L  +M       D  T N  ID  CK G +  A++L
Sbjct: 524 LNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQL 583

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
              L   K   DI AY  LI G+C    +E A+   R +    +  +V T+N+++  L
Sbjct: 584 MDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHL 641



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 173/364 (47%), Gaps = 5/364 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K   +TY  +I+ L  E  +D  + L  QMK E I+     + S+I     A    +A +
Sbjct: 73  KHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALK 132

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F+ M D  V+P+V  +N I+D L    +    + +   M +  + PN FTY+ L+   C
Sbjct: 133 TFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALC 192

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              +++ A +L   M S GC  D+VSY  LI+  CK  +V+EA    RE+ +    P+V 
Sbjct: 193 KNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA----REL-AMSFTPSVP 247

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN L  G+ + +  E A +L +EM    +  +  +Y T I+ L   G +  ++ +   +
Sbjct: 248 VYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKM 307

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
               C  ++  +  LI G    G    AL+ +  + R  +V +VV YN ++HGLC+   +
Sbjct: 308 FARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSL 367

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             A  +F  ME N   PNV  +  LI G+ +        E+ + M      P+    + +
Sbjct: 368 GDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCM 427

Query: 373 VDLL 376
           VD+L
Sbjct: 428 VDVL 431



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 120/228 (52%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN V Y  ++D LC+    ++A  L   M+ EN  P+ VT+N+ I GLC +   + A 
Sbjct: 417 CHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAI 476

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           ++F +M + G  P+  T+N ++D L K+ +  EA  L+  M  R +  N  TY+T++ G+
Sbjct: 477 KVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGY 536

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G +  A EL G M   G K D ++ NI+I+ YCK  +V  A+ L   + +    P +
Sbjct: 537 CCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDI 596

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
           + Y +L  G+     VE A+     M  + ++ + +T+N  +  L  N
Sbjct: 597 IAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSN 644



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 41/265 (15%)

Query: 137 INRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEV----------------------- 172
           I  A E F S+  S   KH  ++Y ++I      +E+                       
Sbjct: 56  ITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFI 115

Query: 173 ------------EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
                       E+AL  +  M    +KPTV  YN +   L + ++ +    ++  M++D
Sbjct: 116 SVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKD 175

Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
            +  +  TYN  +  LCKN  +  A +L   +    C+ D  +Y  LI  LCK G+++ A
Sbjct: 176 GMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA 235

Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
            EL  S    V V     YN +I+G+C +   ++A  L  +M    + PNVI + T+I+ 
Sbjct: 236 RELAMSFTPSVPV-----YNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINA 290

Query: 341 FVRINKPSKVIELLHKMKEKKVMPD 365
                     + +L KM  +   P+
Sbjct: 291 LSDAGNVELSLAVLAKMFARGCSPN 315


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 192/375 (51%), Gaps = 28/375 (7%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL- 73
           +T  Y  +I G C E  + +A+ +F+ M  E I PD   Y +LIH  C A +  +A  L 
Sbjct: 296 DTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALH 355

Query: 74  ---------------FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVR 118
                          F E  D G+    V +N+++D LCK GK++EA  LL+ M  R + 
Sbjct: 356 NDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMS 415

Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
            +   Y+TL+ G+CL GK+  A+ +F  M+  G + D V+YNIL+ G+ +N   +EAL L
Sbjct: 416 LDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALEL 475

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
              + ++G+KP   T+N +  GL    +V+ A      ++   +      Y+  +DG CK
Sbjct: 476 LDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCL----ENYSAMVDGYCK 531

Query: 239 NGYIVEAVELFRTL---GILK-CELDIQA----YNCLIDGLCKSGRLEIALELFRSLPRR 290
             +  +A ELF  L   GIL+   LD++     Y  LI   C+ G ++ A  +F  L  R
Sbjct: 532 ANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVER 591

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
            +  DV+TY +MI+G C    + +A D+F DM+E  + P+VI +  ++ G  + N     
Sbjct: 592 GITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDA 651

Query: 351 IELLHKMKEKKVMPD 365
           I L  +M  + + PD
Sbjct: 652 INLYDEMIARGLQPD 666



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 190/392 (48%), Gaps = 30/392 (7%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E GV   PN VT +T I+GLC     D        ++  N   D   Y ++I G C    
Sbjct: 255 EAGV--NPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMK 312

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN------ 120
             EA+ +F +M+++G+ P    +  ++   CK G + +A  L + MV   ++ N      
Sbjct: 313 LKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFK 372

Query: 121 ----------AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
                        Y+ ++D  C  GK+  A EL   M+      D V Y  LI GYC   
Sbjct: 373 EFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQG 432

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
           ++ +A +++ EM  +GI+P +VTYN L  G       + AL+L + +    +  +++T+N
Sbjct: 433 KLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHN 492

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR- 289
             I+GLC  G + EA     TL   KC   ++ Y+ ++DG CK+     A ELF  L + 
Sbjct: 493 RIIEGLCMAGKVKEAEAFLNTLED-KC---LENYSAMVDGYCKANFTRKAYELFSRLSKQ 548

Query: 290 ---RVLVADV----VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
              R+L  DV    + Y  +I   C DG M +A  +F  + E  + P+VI +  +I+G+ 
Sbjct: 549 GILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYC 608

Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           R+N   +  ++ + MKE+ + PD    ++V+D
Sbjct: 609 RVNCLREARDIFNDMKERGIKPDVITYTVVLD 640



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 185/366 (50%), Gaps = 20/366 (5%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ ++ N +++ L + G +D A A++  +K   +NP+  TY   I  LC   ++ EA  +
Sbjct: 190 PHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDV 249

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM + GV P+ VT +  ++ LC + + D     L  +   +   + F Y+ ++ GFC 
Sbjct: 250 FREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCS 309

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+  AE++F  M + G   D   Y  LI+ YCK   + +A++L+ +MVS GIK  +V 
Sbjct: 310 EMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVD 369

Query: 194 ----------------YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
                           YN +   L ++ +VE A++L  EM+   ++ D   Y T I G C
Sbjct: 370 QFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYC 429

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
             G +V+A  +F  +     E DI  YN L+ G  ++G  + ALEL   +  + L  +  
Sbjct: 430 LQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSA 489

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           T+N +I GLC  G++ +A + FL+  E+    N   +  ++ G+ + N   K  EL  ++
Sbjct: 490 THNRIIEGLCMAGKVKEA-EAFLNTLEDKCLEN---YSAMVDGYCKANFTRKAYELFSRL 545

Query: 358 KEKKVM 363
            ++ ++
Sbjct: 546 SKQGIL 551



 Score =  164 bits (414), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 161/305 (52%), Gaps = 12/305 (3%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + V YN ++D LCK G V++A  L  +MKG  ++ DVV Y +LI G C      +AK +F
Sbjct: 382 DEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMF 441

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM ++G++P +VT+N+++    +NG   EA  LLD +  + ++PN+ T++ +++G C+ 
Sbjct: 442 EEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMA 501

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI------- 187
           GK+  AE    ++E    ++    Y+ +++GYCK     +A  L+  +  +GI       
Sbjct: 502 GKVKEAEAFLNTLEDKCLEN----YSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALD 557

Query: 188 -KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            +P  + Y  L         ++ A  +F+ +    +  D  TY   I+G C+   + EA 
Sbjct: 558 VEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREAR 617

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           ++F  +     + D+  Y  ++DG  K+  L+ A+ L+  +  R L  D+VTY  ++ G 
Sbjct: 618 DIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGK 677

Query: 307 CNDGQ 311
           CN G 
Sbjct: 678 CNFGS 682



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 170/357 (47%), Gaps = 19/357 (5%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           + ++    + G  D+A     Q K     P +++ N L++ L      + A  ++  +  
Sbjct: 161 DMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKR 220

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
            G+ P+  T+ + +  LC+ G  +EA  +   M +  V PNA T ST ++G C   + + 
Sbjct: 221 LGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDL 280

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
             E   ++ +     D  +Y  +I G+C   +++EA  ++ +MV++GI P    Y  L  
Sbjct: 281 GYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIH 340

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
              +   +  A+ L  +M  + +  +                +V+  + FR  GI    L
Sbjct: 341 AYCKAGNLLQAVALHNDMVSNGIKTN----------------LVDQFKEFRDSGIF---L 381

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           D   YN ++D LCK G++E A+EL   +  R +  DVV Y  +I G C  G++  A ++F
Sbjct: 382 DEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMF 441

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +M+E  + P+++ +  L+ GF R     + +ELL  +  + + P+++  + +++ L
Sbjct: 442 EEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGL 498



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 73/123 (59%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN + Y  +I   C++G + +A+ +F  +    I PDV+TY  +I+G C  N   EA+ 
Sbjct: 559 EPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARD 618

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +M ++G++P V+T+ V++D   K   + +A  L D M+ R ++P+  TY+ L+ G C
Sbjct: 619 IFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKC 678

Query: 133 LTG 135
             G
Sbjct: 679 NFG 681



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 153/355 (43%), Gaps = 41/355 (11%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV--- 91
           A + F Q+K      +V TY +LI  LC      + + L  E++  G + SV+ F++   
Sbjct: 80  AWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIV--GSKESVLGFDITAL 137

Query: 92  --IMDELCKNGKMDEASRL---LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
             ++ E     + + +S L   LD++V+  VR                G  + A +    
Sbjct: 138 FDVLREGGGEVEGEHSSVLILVLDMLVKAYVR---------------VGMFDEAIDALFQ 182

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
            +  G     +S N L+N   ++ +++ A+++YR +   G+ P   TY      L     
Sbjct: 183 TKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGN 242

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
            E A+ +F EM+   V  +  T +T+I+GLC +       E  R L      +D  AY  
Sbjct: 243 FEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTA 302

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           +I G C   +L+ A ++F  +    +  D   Y  +IH  C  G + +A  L  DM  N 
Sbjct: 303 VIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNG 362

Query: 327 VAPNV----------------IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +  N+                +++  ++    ++ K  + +ELL++MK +++  D
Sbjct: 363 IKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLD 417


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 186/359 (51%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
            + TYNT+I G CK G  D A+ L  +M     N +  ++ S+I  LC    ++ A R  
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ + + P       ++  LCK+GK  +A  L    + +    +  T + L+ G C  
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 518

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK++ A  +   +   GC  D VSYN LI+G C  K+++EA     EMV +G+KP   TY
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + L  GLF +++VE A++ +++ +R+ +  D  TY+  IDG CK     E  E F  +  
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + +   YN LI   C+SGRL +ALEL   +  + +  +  TY  +I G+    ++++
Sbjct: 639 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 698

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A  LF +M    + PNV  +  LI G+ ++ +  KV  LL +M  K V P+    ++++
Sbjct: 699 AKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 195/368 (52%), Gaps = 3/368 (0%)

Query: 10  VVCK---PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           VVCK   P+   + T I+  CK G V++A  LF +M+   + P+VVT+N++I GL     
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           ++EA     +M+++G++P+++T+++++  L +  ++ +A  +L  M ++   PN   Y+ 
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+D F   G +N+A E+   M S G      +YN LI GYCKN + + A  L +EM+S G
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
                 ++ ++   L      + AL+   EM   +++       T I GLCK+G   +A+
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           EL+         +D +  N L+ GLC++G+L+ A  + + +  R  V D V+YN +I G 
Sbjct: 491 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 550

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C   ++D+A     +M +  + P+   +  LI G   +NK  + I+     K   ++PD 
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 610

Query: 367 SIVSMVVD 374
              S+++D
Sbjct: 611 YTYSVMID 618



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 172/330 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P      T+I GLCK G   KA  L+ Q   +    D  T N+L+HGLC A   +EA R+
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             E++ +G     V++N ++   C   K+DEA   LD MV+R ++P+ +TYS L+ G   
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+  A + +   +  G   D  +Y+++I+G CK +  EE    + EM+SK ++P  V 
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L        ++  AL+L E+M+   ++ +++TY + I G+     + EA  LF  + 
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   E ++  Y  LIDG  K G++     L R +  + +  + +TY +MI G   DG + 
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 767

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           +A  L  +M E  + P+ I +   I+G+++
Sbjct: 768 EASRLLNEMREKGIVPDSITYKEFIYGYLK 797



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 185/367 (50%), Gaps = 2/367 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E GV   PN VT+NT+IDGL   G  D+A     +M    + P ++TY+ L+ GL  A  
Sbjct: 288 EAGVA--PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A  +  EM  +G  P+V+ +N ++D   + G +++A  + DLMV + +   + TY+T
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ G+C  G+ + AE L   M S+G   +  S+  +I   C +   + AL    EM+ + 
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P      TL  GL +  +   AL+L+ +        DT T N  + GLC+ G + EA 
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            + + +    C +D  +YN LI G C   +L+ A      + +R L  D  TY+I+I GL
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            N  ++++A   + D + N + P+V  +  +I G  +  +  +  E   +M  K V P+ 
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645

Query: 367 SIVSMVV 373
            + + ++
Sbjct: 646 VVYNHLI 652



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 183/364 (50%), Gaps = 6/364 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN + YN +ID   + G ++KA  +   M  + ++    TYN+LI G C     + A+RL
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+  G   +  +F  ++  LC +   D A R +  M+ R++ P     +TL+ G C 
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK ++A EL+    + G   D  + N L++G C+  +++EA  + +E++ +G     V+
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 542

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF---R 250
           YNTL  G     +++ A    +EM +  +  D  TY+  I GL     + EA++ +   +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             G+L    D+  Y+ +IDG CK+ R E   E F  +  + +  + V YN +I   C  G
Sbjct: 603 RNGMLP---DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++  A +L  DM+   ++PN   + +LI G   I++  +   L  +M+ + + P+    +
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 719

Query: 371 MVVD 374
            ++D
Sbjct: 720 ALID 723



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 169/371 (45%), Gaps = 36/371 (9%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           +F  +  + + P   T N L+  L  AN++ +    F +++ +GV P V  F   ++  C
Sbjct: 213 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFC 271

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K GK++EA +L   M +  V PN  T++T++DG  + G+ + A      M   G +   +
Sbjct: 272 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLI 331

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y+IL+ G  + K + +A  + +EM  KG  P V+ YN L     E   +  A+++ + M
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC----------- 266
               ++  +STYNT I G CKNG    A  L + +  +   ++  ++             
Sbjct: 392 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 451

Query: 267 ------------------------LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
                                   LI GLCK G+   ALEL+     +  V D  T N +
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           +HGLC  G++D+A  +  ++       + + + TLI G     K  +    L +M ++ +
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571

Query: 363 MPDASIVSMVV 373
            PD    S+++
Sbjct: 572 KPDNYTYSILI 582



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 122/235 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY+ +I GL     V++A   +   K   + PDV TY+ +I G C A    E + 
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EMM + VQP+ V +N ++   C++G++  A  L + M  + + PN+ TY++L+ G  
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  ++  A+ LF  M   G + +   Y  LI+GY K  ++ +   L REM SK + P  +
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           TY  +  G      V  A +L  EM+   +  D+ TY  FI G  K G ++EA +
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 144/300 (48%), Gaps = 9/300 (3%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G  C  + V+YNT+I G C +  +D+A     +M    + PD  TY+ LI GL + N  
Sbjct: 532 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA + + +    G+ P V T++V++D  CK  + +E     D M+ ++V+PN   Y+ L
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +  +C +G+++ A EL   M+  G   +  +Y  LI G      VEEA  L+ EM  +G+
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P V  Y  L  G  ++ Q+     L  EM   +V  +  TY   I G  ++G + EA  
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771

Query: 248 LF---RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           L    R  GI+    D   Y   I G  K G +   LE F+        A +  +N +I 
Sbjct: 772 LLNEMREKGIVP---DSITYKEFIYGYLKQGGV---LEAFKGSDEENYAAIIEGWNKLIQ 825



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 1/98 (1%)

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           +AL++F  L  + +     T NI++  L    +  K  + F D+    V+P+V +F T I
Sbjct: 209 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAI 267

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + F +  K  + ++L  KM+E  V P+    + V+D L
Sbjct: 268 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL 305


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 184/351 (52%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + VT + ++ GLC++G   +A ALF +M      P+ VTY +LI  L  A    E   L 
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ +GV   +VT+  +MD L K GK DE    L   +  ++  N  TY+ L+D  C  
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKA 392

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
             ++ AE++   ME      + V+++ +ING+ K   +++A    R M  +GI P VVTY
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            TL  G F+    + AL+++ +M  + V  +    ++ ++GL +NG I EA+ LF+    
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
               LD   Y  LIDGL K+G +  A +  + L  R ++ D V YN+ I+ LC  G+  +
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKE 572

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           A  +  +M    + P+   + T+I    R  + +K ++LLH+MK   + P+
Sbjct: 573 AKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/342 (32%), Positives = 172/342 (50%), Gaps = 3/342 (0%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINP-DVVTYNSLIHGLCHANDWNEAKRLFF 75
           VT NT++ GLC+ G VD A AL    +G  I+  DV+ +N+LI G C   D   A  +  
Sbjct: 136 VTVNTLLAGLCRNGQVDAAAAL--ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVAD 193

Query: 76  EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
            M  QG+   VV +N ++   C+ G++D A  +LD+M +  V PN  TY+  +  +C T 
Sbjct: 194 RMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTK 253

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
            +  A +L+  M   G   D V+ + L+ G C++    EA +L+REM   G  P  VTY 
Sbjct: 254 GVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYC 313

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           TL   L +  + +  L L  EM    V  D  TY   +D L K G   E  +  R     
Sbjct: 314 TLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSD 373

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
              L+   Y  LID LCK+  ++ A ++   +  + +  +VVT++ +I+G    G +DKA
Sbjct: 374 NLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKA 433

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            +    M+E  + PNV+ + TLI GF +       +E+ H M
Sbjct: 434 TEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM 475



 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 180/391 (46%), Gaps = 35/391 (8%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V Y T+IDGL K G +  A     ++   N+ PD V YN  I+ LC    + EAK +  E
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTE 579

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M + G++P   T+N ++   C+ G+  +A +LL  M    ++PN  TY+TL+ G   TG 
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639

Query: 137 INRAEELFGSMESMG--------------CK--------------------HDDVS-YNI 161
           + +A+ L   M S G              C                     H D++ YN 
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L+   C +    +A  +  EM+  GI P  +T+N L LG  +   +++A   + +M   +
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           ++ + +T+NT + GL   G I EA  +   +     E +   Y+ L+ G  K      A+
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAM 819

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
            L+  +  +  V  V TYN +I      G M +A +LF DM++  V P    +  L+ G+
Sbjct: 820 RLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            RI   ++V + L  MKEK   P    +S +
Sbjct: 880 SRIRNGTEVKKCLKDMKEKGFSPSKGTLSFI 910



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 185/360 (51%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTY  ++D L K+G  D+ K        +N++ + VTY  LI  LC A++ +EA+++  E
Sbjct: 345 VTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLE 404

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M ++ + P+VVTF+ +++   K G +D+A+    +M +R + PN  TY TL+DGF     
Sbjct: 405 MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQG 464

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
            + A E++  M   G + +    + L+NG  +N ++EEA++L+++    G+    V Y T
Sbjct: 465 QDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTT 524

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  GLF+   +  A K  +E+   ++  D   YN FI+ LC  G   EA  +   +  + 
Sbjct: 525 LIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMG 584

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            + D   YN +I   C+ G    AL+L   +    +  +++TYN ++ GL   G ++KA 
Sbjct: 585 LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAK 644

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            L  +M     +P+ +    ++    +  +   ++++   M    +  D ++ + ++ +L
Sbjct: 645 YLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVL 704



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 171/365 (46%), Gaps = 10/365 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P TV YN ++  L        A A+  +M    +  D VT N+L+ GLC     + A  
Sbjct: 100 RPTTVAYNILLAALSDHA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 73  LFFEMMDQGV---QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           L     D+G       V+ +N ++   C+ G    A  + D M  + +  +   Y+TL+ 
Sbjct: 157 L----ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVA 212

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           GFC  G+++ A  +   M+  G   +  +Y   I  YC+ K VEEA  LY  MV  G+  
Sbjct: 213 GFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLL 272

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VVT + L  GL    +   A  LF EM +     +  TY T ID L K G   E + L 
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
             +      +D+  Y  L+D L K G+ +   +  R      L  + VTY ++I  LC  
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKA 392

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
             +D+A  + L+MEE +++PNV+ F ++I+GFV+     K  E    MKE+ + P+    
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 370 SMVVD 374
             ++D
Sbjct: 453 GTLID 457



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 181/360 (50%), Gaps = 2/360 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           ++G V  PN VTY T+ID L K G   +  +L  +M    +  D+VTY +L+  L     
Sbjct: 302 KVGAV--PNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGK 359

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            +E K      +   +  + VT+ V++D LCK   +DEA ++L  M ++ + PN  T+S+
Sbjct: 360 TDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSS 419

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           +++GF   G +++A E    M+  G   + V+Y  LI+G+ K +  + AL +Y +M+ +G
Sbjct: 420 VINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEG 479

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           ++      ++L  GL +  ++E A+ LF++     ++ D   Y T IDGL K G +  A 
Sbjct: 480 VEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAF 539

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           +  + L       D   YN  I+ LC  G+ + A  +   +    L  D  TYN MI   
Sbjct: 540 KFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSH 599

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C  G+  KA  L  +M+ +++ PN+I + TL+ G        K   LL++M      P +
Sbjct: 600 CRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSS 659



 Score =  157 bits (397), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 160/325 (49%), Gaps = 14/325 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TYNT+I   C++G   KA  L  +MK  +I P+++TYN+L+ GL       +AK 
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+  G  PS +T   ++    ++ ++D    + + M+   +  +   Y+TL+   C
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G   +A  +   M   G   D +++N LI G+CK+  ++ A + Y +M+ + I P + 
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIA 765

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T+NTL  GL  + ++  A  +  EM++  +  +  TY+  + G  K    VEA+ L+   
Sbjct: 766 TFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLY--- 822

Query: 253 GILKCEL-------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
               CE+        +  YN LI    K+G +  A ELF+ + +R +     TY+I++ G
Sbjct: 823 ----CEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPN 330
                   +      DM+E   +P+
Sbjct: 879 WSRIRNGTEVKKCLKDMKEKGFSPS 903



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 202/465 (43%), Gaps = 105/465 (22%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N VTY  +ID LCK   VD+A+ + L+M+ ++I+P+VVT++S+I+G       ++A    
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYK 437

Query: 75  FEMMDQGVQPSVVTFNVIMDE-----------------LC------------------KN 99
             M ++G+ P+VVT+  ++D                  LC                  +N
Sbjct: 438 RMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQN 497

Query: 100 GKMDEA-------------------SRLLDLMVQRDVRPNAF----------------TY 124
           GK++EA                   + L+D + +    P AF                 Y
Sbjct: 498 GKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           +  ++  C+ GK   A+ +   M +MG K D  +YN +I  +C+  E  +AL L  EM  
Sbjct: 558 NVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKM 617

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM----------------------QRDDV 222
             IKP ++TYNTL  GLF    VE A  L  EM                      +R DV
Sbjct: 618 SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDV 677

Query: 223 A-------------ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
                         AD + YNT +  LC +G   +A  +   +       D   +N LI 
Sbjct: 678 ILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALIL 737

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           G CKS  L+ A   +  +  + +  ++ T+N ++ GL + G++ +A  + ++ME++ + P
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEP 797

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           N + +  L+ G  + +   + + L  +M  K  +P  S  + ++ 
Sbjct: 798 NNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALIS 842



 Score =  148 bits (373), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 189/397 (47%), Gaps = 35/397 (8%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + + +NT+I G C+ G    A ++  +M  + +  DVV YN+L+ G C A   + A+ + 
Sbjct: 168 DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVL 227

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M + GV P+V T+   +   C+   ++EA  L + MV+  V  +  T S L+ G C  
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+ + A  LF  M+ +G   + V+Y  LI+   K    +E LSL  EMVS+G+   +VTY
Sbjct: 288 GRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347

Query: 195 NTL--FLG---------------------------------LFEIHQVEHALKLFEEMQR 219
             L  +LG                                 L + H V+ A ++  EM+ 
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
             ++ +  T+++ I+G  K G + +A E  R +       ++  Y  LIDG  K    + 
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           ALE++  +    +  +    + +++GL  +G++++A  LF D   + ++ + + + TLI 
Sbjct: 468 ALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           G  +        +   ++ ++ ++PDA + ++ ++ L
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 109/234 (46%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           YNT++  LC  G   KA  +  +M G  I PD +T+N+LI G C ++  + A   + +M+
Sbjct: 697 YNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQML 756

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            Q + P++ TFN ++  L   G++ EA  +L  M +  + PN  TY  L+ G        
Sbjct: 757 HQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKV 816

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A  L+  M   G      +YN LI+ + K   + +A  L+++M  +G+ PT  TY+ L 
Sbjct: 817 EAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            G   I       K  ++M+    +    T +       K G   +A  L + L
Sbjct: 877 SGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 108/212 (50%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G    P+T+T+N +I G CK   +D A A + QM  +NI+P++ T+N+L+ GL      
Sbjct: 721 LGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRI 780

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA  +  EM   G++P+ +T+++++    K     EA RL   MV +   P   TY+ L
Sbjct: 781 GEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNAL 840

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +  F   G + +A+ELF  M+  G      +Y+IL++G+ + +   E     ++M  KG 
Sbjct: 841 ISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGF 900

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
            P+  T + +     +      A +L + + R
Sbjct: 901 SPSKGTLSFICRAFSKPGMTWQAQRLLKNLYR 932


>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
          Length = 567

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 181/309 (58%), Gaps = 2/309 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALF-LQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           KPN + YNT+I+G CK+G ++ A+ +F   M GE+  P+ VTY +LI G C   +  EAK
Sbjct: 223 KPNLLAYNTMINGFCKKGDMESARLVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAK 282

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +   EMM++G +P+ +T+N ++  LC NG++DEA  L+  M     + N  T+ +++ G 
Sbjct: 283 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 342

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C+ GK ++A     ++       D  SY ++ING+CK  + +EA+SL +EM ++G+KPTV
Sbjct: 343 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 402

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC-KNGYIVEAVELFR 250
            ++N +F  L E  +++ A+ L ++M + D   +  +YNT I GLC   G + +  +L  
Sbjct: 403 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 462

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +      LD   Y+CL+ G C+ G +E  +++   +  +  V  + ++++++  LC  G
Sbjct: 463 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKYVIGLESFSVLVKQLCAKG 522

Query: 311 QMDKAHDLF 319
           ++ +A  LF
Sbjct: 523 KVTEAEKLF 531



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 187/362 (51%), Gaps = 6/362 (1%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGEN-INPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           +YN+++  L +   +  A+  F Q+  EN + PDV TY ++I G C       AK++F  
Sbjct: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ-RDVRPNAFTYSTLMDGFCLTG 135
           M    V+P+++ +N +++  CK G M+ A  + D M+   D  PN  TY+TL+DG+C  G
Sbjct: 220 MT---VKPNLLAYNTMINGFCKKGDMESARLVFDRMMSGEDCLPNHVTYTTLIDGYCKKG 276

Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
           ++  A++    M + GC+ ++++YN +I G C N  V+EA  L  +M   G K  V T+ 
Sbjct: 277 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 336

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
           ++  GL  + + + A+     +   ++  D  +Y   I+G CK G   EA+ L + +   
Sbjct: 337 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 396

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC-NDGQMDK 314
             +  + ++N +   L ++G L+ A+ L + +P+   + + V+YN +I GLC   G+M  
Sbjct: 397 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 456

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             DL   M  +    +  ++  L+ G+        V+++ H+M  KK +      S++V 
Sbjct: 457 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKYVIGLESFSVLVK 516

Query: 375 LL 376
            L
Sbjct: 517 QL 518



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 163/322 (50%), Gaps = 5/322 (1%)

Query: 22  IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG 81
           +I      G V  A   F Q K       + +YNSL+  L   N    A+  F +++ + 
Sbjct: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188

Query: 82  V-QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           V  P V T+  ++   CK G ++ A ++ D+M    V+PN   Y+T+++GFC  G +  A
Sbjct: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGDMESA 245

Query: 141 EELFGSMES-MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
             +F  M S   C  + V+Y  LI+GYCK  E+EEA     EM+++G +P  +TYN +  
Sbjct: 246 RLVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 305

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           GL    +V+ A  L  +M+ +    + ST+ + + GLC  G   +AV   R +       
Sbjct: 306 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 365

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           D+++Y  +I+G CK G+ + A+ L + +  R L   V ++N +   L  +G++D+A  L 
Sbjct: 366 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 425

Query: 320 LDMEENAVAPNVIIFVTLIHGF 341
             M +    PN + + T+I G 
Sbjct: 426 KQMPQMDCLPNFVSYNTIICGL 447



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 152/292 (52%), Gaps = 2/292 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C PN VTY T+IDG CK+G +++AK    +M      P+ +TYN++I+GLC     +
Sbjct: 255 GEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 314

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EAK L  +M   G + +V T   ++  LC  GK D+A   L  +++ ++ P+  +Y  ++
Sbjct: 315 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 374

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           +GFC  GK + A  L   M + G K    S+N +     +N E++ A+ L ++M      
Sbjct: 375 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 434

Query: 189 PTVVTYNTLFLGL-FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           P  V+YNT+  GL     +++    L + M R     D + Y+  + G C+ G +   ++
Sbjct: 435 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 494

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           +   +   K  + +++++ L+  LC  G++  A +LF +  R   V DV +Y
Sbjct: 495 IAHEMVTKKYVIGLESFSVLVKQLCAKGKVTEAEKLFDTCSRCPAV-DVDSY 545



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 5/245 (2%)

Query: 122 FTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS-YNILINGYCKNKEVEEALSLYR 180
           ++Y++L+        I  AEE F  +        DVS Y  +I GYCK   +E A  ++ 
Sbjct: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR-DDVAADTSTYNTFIDGLCKN 239
            M    +KP ++ YNT+  G  +   +E A  +F+ M   +D   +  TY T IDG CK 
Sbjct: 219 VMT---VKPNLLAYNTMINGFCKKGDMESARLVFDRMMSGEDCLPNHVTYTTLIDGYCKK 275

Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
           G + EA +    +    C  +   YN +I GLC +GR++ A  L   +       +V T+
Sbjct: 276 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 335

Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
             M+ GLC  G+ D+A     ++ E  + P+V  +  +I+GF +I K  + I LL +M+ 
Sbjct: 336 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 395

Query: 360 KKVMP 364
           + + P
Sbjct: 396 RGLKP 400


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 186/359 (51%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
            + TYNT+I G CK G  D A+ L  +M     N +  ++ S+I  LC    ++ A R  
Sbjct: 388 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 447

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ + + P       ++  LCK+GK  +A  L    + +    +  T + L+ G C  
Sbjct: 448 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 507

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK++ A  +   +   GC  D VSYN LI+G C  K+++EA     EMV +G+KP   TY
Sbjct: 508 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 567

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + L  GLF +++VE A++ +++ +R+ +  D  TY+  IDG CK     E  E F  +  
Sbjct: 568 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 627

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + +   YN LI   C+SGRL +ALEL   +  + +  +  TY  +I G+    ++++
Sbjct: 628 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 687

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A  LF +M    + PNV  +  LI G+ ++ +  KV  LL +M  K V P+    ++++
Sbjct: 688 AKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 746



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 195/368 (52%), Gaps = 3/368 (0%)

Query: 10  VVCK---PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           VVCK   P+   + T I+  CK G V++A  LF +M+   + P+VVT+N++I GL     
Sbjct: 240 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 299

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           ++EA     +M+++G++P+++T+++++  L +  ++ +A  +L  M ++   PN   Y+ 
Sbjct: 300 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 359

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+D F   G +N+A E+   M S G      +YN LI GYCKN + + A  L +EM+S G
Sbjct: 360 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 419

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
                 ++ ++   L      + AL+   EM   +++       T I GLCK+G   +A+
Sbjct: 420 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 479

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           EL+         +D +  N L+ GLC++G+L+ A  + + +  R  V D V+YN +I G 
Sbjct: 480 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 539

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C   ++D+A     +M +  + P+   +  LI G   +NK  + I+     K   ++PD 
Sbjct: 540 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 599

Query: 367 SIVSMVVD 374
              S+++D
Sbjct: 600 YTYSVMID 607



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 172/330 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P      T+I GLCK G   KA  L+ Q   +    D  T N+L+HGLC A   +EA R+
Sbjct: 457 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 516

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             E++ +G     V++N ++   C   K+DEA   LD MV+R ++P+ +TYS L+ G   
Sbjct: 517 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 576

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+  A + +   +  G   D  +Y+++I+G CK +  EE    + EM+SK ++P  V 
Sbjct: 577 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 636

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L        ++  AL+L E+M+   ++ +++TY + I G+     + EA  LF  + 
Sbjct: 637 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 696

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   E ++  Y  LIDG  K G++     L R +  + +  + +TY +MI G   DG + 
Sbjct: 697 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 756

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           +A  L  +M E  + P+ I +   I+G+++
Sbjct: 757 EASRLLNEMREKGIVPDSITYKEFIYGYLK 786



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 185/367 (50%), Gaps = 2/367 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E GV   PN VT+NT+IDGL   G  D+A     +M    + P ++TY+ L+ GL  A  
Sbjct: 277 EAGVA--PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 334

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A  +  EM  +G  P+V+ +N ++D   + G +++A  + DLMV + +   + TY+T
Sbjct: 335 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 394

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ G+C  G+ + AE L   M S+G   +  S+  +I   C +   + AL    EM+ + 
Sbjct: 395 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 454

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P      TL  GL +  +   AL+L+ +        DT T N  + GLC+ G + EA 
Sbjct: 455 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 514

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            + + +    C +D  +YN LI G C   +L+ A      + +R L  D  TY+I+I GL
Sbjct: 515 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 574

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            N  ++++A   + D + N + P+V  +  +I G  +  +  +  E   +M  K V P+ 
Sbjct: 575 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 634

Query: 367 SIVSMVV 373
            + + ++
Sbjct: 635 VVYNHLI 641



 Score =  164 bits (414), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 183/364 (50%), Gaps = 6/364 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN + YN +ID   + G ++KA  +   M  + ++    TYN+LI G C     + A+RL
Sbjct: 352 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 411

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+  G   +  +F  ++  LC +   D A R +  M+ R++ P     +TL+ G C 
Sbjct: 412 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 471

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK ++A EL+    + G   D  + N L++G C+  +++EA  + +E++ +G     V+
Sbjct: 472 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 531

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF---R 250
           YNTL  G     +++ A    +EM +  +  D  TY+  I GL     + EA++ +   +
Sbjct: 532 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 591

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             G+L    D+  Y+ +IDG CK+ R E   E F  +  + +  + V YN +I   C  G
Sbjct: 592 RNGMLP---DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 648

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++  A +L  DM+   ++PN   + +LI G   I++  +   L  +M+ + + P+    +
Sbjct: 649 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 708

Query: 371 MVVD 374
            ++D
Sbjct: 709 ALID 712



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 169/371 (45%), Gaps = 36/371 (9%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           +F  +  + + P   T N L+  L  AN++ +    F +++ +GV P V  F   ++  C
Sbjct: 202 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFC 260

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K GK++EA +L   M +  V PN  T++T++DG  + G+ + A      M   G +   +
Sbjct: 261 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLI 320

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y+IL+ G  + K + +A  + +EM  KG  P V+ YN L     E   +  A+++ + M
Sbjct: 321 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 380

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC----------- 266
               ++  +STYNT I G CKNG    A  L + +  +   ++  ++             
Sbjct: 381 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 440

Query: 267 ------------------------LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
                                   LI GLCK G+   ALEL+     +  V D  T N +
Sbjct: 441 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 500

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           +HGLC  G++D+A  +  ++       + + + TLI G     K  +    L +M ++ +
Sbjct: 501 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 560

Query: 363 MPDASIVSMVV 373
            PD    S+++
Sbjct: 561 KPDNYTYSILI 571



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 122/235 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY+ +I GL     V++A   +   K   + PDV TY+ +I G C A    E + 
Sbjct: 561 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 620

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EMM + VQP+ V +N ++   C++G++  A  L + M  + + PN+ TY++L+ G  
Sbjct: 621 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 680

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  ++  A+ LF  M   G + +   Y  LI+GY K  ++ +   L REM SK + P  +
Sbjct: 681 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 740

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           TY  +  G      V  A +L  EM+   +  D+ TY  FI G  K G ++EA +
Sbjct: 741 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 795



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 144/300 (48%), Gaps = 9/300 (3%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G  C  + V+YNT+I G C +  +D+A     +M    + PD  TY+ LI GL + N  
Sbjct: 521 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 580

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA + + +    G+ P V T++V++D  CK  + +E     D M+ ++V+PN   Y+ L
Sbjct: 581 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 640

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +  +C +G+++ A EL   M+  G   +  +Y  LI G      VEEA  L+ EM  +G+
Sbjct: 641 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 700

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P V  Y  L  G  ++ Q+     L  EM   +V  +  TY   I G  ++G + EA  
Sbjct: 701 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 760

Query: 248 LF---RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           L    R  GI+    D   Y   I G  K G +   LE F+        A +  +N +I 
Sbjct: 761 LLNEMREKGIVP---DSITYKEFIYGYLKQGGV---LEAFKGSDEENYAAIIEGWNKLIQ 814



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 1/98 (1%)

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           +AL++F  L  + +     T NI++  L    +  K  + F D+    V+P+V +F T I
Sbjct: 198 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAI 256

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + F +  K  + ++L  KM+E  V P+    + V+D L
Sbjct: 257 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL 294


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 188/363 (51%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +CK N   ++ +I    +EG V  A   F  M     NP V T N L+  L         
Sbjct: 93  LCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAV 152

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
              F EM+ + V P V TFN++++ LC  GK+ +A  LL  M +    P+  TY+T+++ 
Sbjct: 153 WLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNW 212

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +C  G+   A EL   M S G + D  +YN+L++  CKN    +   L ++M  + I P 
Sbjct: 213 YCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPN 272

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            +TYN++  G  +  ++  A ++F+EM   ++  +  TYN  IDG C +G   +A+ +  
Sbjct: 273 EITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILE 332

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +     + +  +Y+ L++GLC+  + E++  +   +    ++   + Y  MI GLC +G
Sbjct: 333 MMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNG 392

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
            ++++  L   M ++ V P+V+ F  LI+GF R+ K   V E++ KM +  + P++ I +
Sbjct: 393 LLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYT 452

Query: 371 MVV 373
            ++
Sbjct: 453 TLI 455



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 177/345 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           + +  TYN ++D LCK     K   L  +M+   I+P+ +TYNS+I+G         A R
Sbjct: 235 EADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATR 294

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM    + P+ VT+N ++D  C +G  ++A  +L++M     +PN  +YS L++G C
Sbjct: 295 IFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLC 354

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K   ++ +   M   G     ++Y  +I+G C+N  + E++ L  +M+  G+ P VV
Sbjct: 355 RHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVV 414

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           T++ L  G   + ++++  ++  +M +  +A ++  Y T I   CK G +VEA +++  +
Sbjct: 415 TFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAM 474

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +  + +    N L+  LCK G++ +A   F  + +   V + +T++ +I+G  N G  
Sbjct: 475 SRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNG 534

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
            KA  +F +M +    P+   +  L+    R  K  +   LL K+
Sbjct: 535 LKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKL 579



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 106/425 (24%), Positives = 193/425 (45%), Gaps = 72/425 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V+Y+ +++GLC+    + +K++  +M+   +    + Y ++I GLC     NE+ +
Sbjct: 340 KPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVK 399

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M+  GV P VVTF+V+++  C+ GK+     ++  M +  + PN+  Y+TL+  +C
Sbjct: 400 LLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYC 459

Query: 133 LT-----------------------------------GKINRAEELFGSMESMGCKHDDV 157
            T                                   GK+  AE  F  M  +G   + +
Sbjct: 460 KTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSI 519

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPT--------------------------- 190
           +++ +INGY  +    +A S++ EM+  G  P+                           
Sbjct: 520 TFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKL 579

Query: 191 --------VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
                    VTYNT+ +  F+   +  A+ LF+EM + +V  D+ TY     GL + G +
Sbjct: 580 HYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKM 639

Query: 243 VEAVELF-RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           V A+  +   LG      +   Y   +DGL ++G+ + AL     + +  L AD++  N+
Sbjct: 640 VAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNV 699

Query: 302 MIHGLCNDGQMDKAHDLFLDMEEN-AVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
           +++G    G+M KA D+F  M     ++P++  +  L+HG+ +    SK   L + M   
Sbjct: 700 ILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRT 759

Query: 361 KVMPD 365
            + PD
Sbjct: 760 GIFPD 764



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 181/423 (42%), Gaps = 71/423 (16%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +TYN+II+G  KEG +  A  +F +M   N+ P+ VTYN+LI G CH  ++ +A  +
Sbjct: 271 PNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTI 330

Query: 74  FFEMMDQGVQPSVVTFNVIM-----------------------------------DELCK 98
              M   G +P+ V+++ ++                                   D LC+
Sbjct: 331 LEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCR 390

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           NG ++E+ +LLD M++  V P+  T+S L++GFC  GKI   +E+   M   G   + + 
Sbjct: 391 NGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSII 450

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIK------------------------------ 188
           Y  LI  YCK  +V EA  +Y  M   G                                
Sbjct: 451 YTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMS 510

Query: 189 -----PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
                P  +T++ +  G         A  +F+EM +        TY   +  LC+ G   
Sbjct: 511 KIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFK 570

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           EA  L   L  +   +D   YN ++    KSG L  A+ LF  + +R ++ D  TY I+ 
Sbjct: 571 EAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIF 630

Query: 304 HGLCNDGQMDKAHDLFLD-MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
            GL   G+M  A   + + + + AV+P  +++ T + G  R  +    +     M++  +
Sbjct: 631 AGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGL 690

Query: 363 MPD 365
             D
Sbjct: 691 CAD 693



 Score =  138 bits (348), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 159/320 (49%), Gaps = 1/320 (0%)

Query: 9    GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
            G+   P+  TYN ++ G  K+  + K   L+  M    I PD +T +SLI G C +   +
Sbjct: 723  GITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLD 782

Query: 69   EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
               +L  +M+  GV     TFN+++ + C+  ++ +A  L+++M   D+ P+  T+ +++
Sbjct: 783  VGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSII 842

Query: 129  DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
                    +  +  L   M   GC  D   Y  L+N  C+   +  A  L  EM + GI 
Sbjct: 843  SVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGIS 902

Query: 189  PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
               V  + L  GL +  +VE A  + + M R  +    +T+ T +   C+N  +VEA++L
Sbjct: 903  SGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKL 962

Query: 249  FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL-C 307
              T+     +LD+ AYN LI GLC  G +  AL+L++ + +R L  ++ TY I+I  +  
Sbjct: 963  KDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFT 1022

Query: 308  NDGQMDKAHDLFLDMEENAV 327
            ND  + K   L  D++E  V
Sbjct: 1023 NDISLAKGEVLLKDLQERGV 1042



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 167/364 (45%), Gaps = 2/364 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N    N ++  LCK+G V  A+  F  M      P+ +T++ +I+G  ++ +  +A  +F
Sbjct: 482 NCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMF 541

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+  G  PS  T+  ++  LC+ GK  EA RLLD +       +  TY+T++     +
Sbjct: 542 DEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKS 601

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-IKPTVVT 193
           G +  A  LF  M       D  +Y I+  G  +  ++  AL  Y  ++ KG + P  V 
Sbjct: 602 GMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVM 661

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y T   GLF   Q + AL   E+M+++ + AD    N  ++G  + G + +A ++F  + 
Sbjct: 662 YTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMW 721

Query: 254 I-LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +     +  YN L+ G  K   L     L+  + R  +  D +T + +I G C    +
Sbjct: 722 SGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAML 781

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D    L   M  + VA +   F  LI  +   ++  K  +L++ M    + PD +    +
Sbjct: 782 DVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSI 841

Query: 373 VDLL 376
           + +L
Sbjct: 842 ISVL 845



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 170/363 (46%), Gaps = 3/363 (0%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            P  V Y T +DGL + G    A      M+   +  D++  N +++G        +A  +
Sbjct: 657  PEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDI 716

Query: 74   FFEMMDQGV--QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            F  MM  G+   PS+ T+N+++    K   + + S L ++M++  + P+  T  +L+ GF
Sbjct: 717  F-TMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGF 775

Query: 132  CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            C +  ++   +L   M   G   D  ++N+LI  YC+  EV +A  L   M    I P +
Sbjct: 776  CKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDM 835

Query: 192  VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             T++++   L  +  V+ +  L  EM       D   Y   ++ +C+ G+I  A +L   
Sbjct: 836  TTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDE 895

Query: 252  LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
            +  L       A + L+ GL K G++E A  +   + R+ L+  + T+  ++H  C +  
Sbjct: 896  MEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNES 955

Query: 312  MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            + +A  L   M+   V  +VI +  LI G       +  ++L  ++K++ + P+ +   +
Sbjct: 956  LVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCI 1015

Query: 372  VVD 374
            ++D
Sbjct: 1016 LID 1018



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 80/151 (52%)

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL 283
           ++ S ++  I    + G + +A+E FR +GI      +   N L+  L K  ++      
Sbjct: 96  SNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLF 155

Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           F+ +  R +  DV T+NI+I+ LC +G++ KA  L   MEE+   P+V+ + T+++ + +
Sbjct: 156 FKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCK 215

Query: 344 INKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +    +EL+ +M  K +  DA   +M+VD
Sbjct: 216 KGRYKAALELIDQMGSKGIEADACTYNMLVD 246


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 186/359 (51%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
            + TYNT+I G CK G  D A+ L  +M     N +  ++ S+I  LC    ++ A R  
Sbjct: 412 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 471

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM+ + + P       ++  LCK+GK  +A  L    + +    +  T + L+ G C  
Sbjct: 472 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 531

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK++ A  +   +   GC  D VSYN LI+G C  K+++EA     EMV +G+KP   TY
Sbjct: 532 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 591

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + L  GLF +++VE A++ +++ +R+ +  D  TY+  IDG CK     E  E F  +  
Sbjct: 592 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 651

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              + +   YN LI   C+SGRL +ALEL   +  + +  +  TY  +I G+    ++++
Sbjct: 652 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 711

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A  LF +M    + PNV  +  LI G+ ++ +  KV  LL +M  K V P+    ++++
Sbjct: 712 AKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 770



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 195/368 (52%), Gaps = 3/368 (0%)

Query: 10  VVCK---PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           VVCK   P+   + T I+  CK G V++A  LF +M+   + P+VVT+N++I GL     
Sbjct: 264 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 323

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           ++EA     +M+++G++P+++T+++++  L +  ++ +A  +L  M ++   PN   Y+ 
Sbjct: 324 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 383

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+D F   G +N+A E+   M S G      +YN LI GYCKN + + A  L +EM+S G
Sbjct: 384 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 443

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
                 ++ ++   L      + AL+   EM   +++       T I GLCK+G   +A+
Sbjct: 444 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 503

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
           EL+         +D +  N L+ GLC++G+L+ A  + + +  R  V D V+YN +I G 
Sbjct: 504 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 563

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C   ++D+A     +M +  + P+   +  LI G   +NK  + I+     K   ++PD 
Sbjct: 564 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 623

Query: 367 SIVSMVVD 374
              S+++D
Sbjct: 624 YTYSVMID 631



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 172/330 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P      T+I GLCK G   KA  L+ Q   +    D  T N+L+HGLC A   +EA R+
Sbjct: 481 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 540

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             E++ +G     V++N ++   C   K+DEA   LD MV+R ++P+ +TYS L+ G   
Sbjct: 541 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 600

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+  A + +   +  G   D  +Y+++I+G CK +  EE    + EM+SK ++P  V 
Sbjct: 601 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 660

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L        ++  AL+L E+M+   ++ +++TY + I G+     + EA  LF  + 
Sbjct: 661 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 720

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +   E ++  Y  LIDG  K G++     L R +  + +  + +TY +MI G   DG + 
Sbjct: 721 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 780

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           +A  L  +M E  + P+ I +   I+G+++
Sbjct: 781 EASRLLNEMREKGIVPDSITYKEFIYGYLK 810



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 185/367 (50%), Gaps = 2/367 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E GV   PN VT+NT+IDGL   G  D+A     +M    + P ++TY+ L+ GL  A  
Sbjct: 301 EAGVA--PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 358

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
             +A  +  EM  +G  P+V+ +N ++D   + G +++A  + DLMV + +   + TY+T
Sbjct: 359 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 418

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ G+C  G+ + AE L   M S+G   +  S+  +I   C +   + AL    EM+ + 
Sbjct: 419 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 478

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P      TL  GL +  +   AL+L+ +        DT T N  + GLC+ G + EA 
Sbjct: 479 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 538

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            + + +    C +D  +YN LI G C   +L+ A      + +R L  D  TY+I+I GL
Sbjct: 539 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 598

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
            N  ++++A   + D + N + P+V  +  +I G  +  +  +  E   +M  K V P+ 
Sbjct: 599 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 658

Query: 367 SIVSMVV 373
            + + ++
Sbjct: 659 VVYNHLI 665



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 183/364 (50%), Gaps = 6/364 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN + YN +ID   + G ++KA  +   M  + ++    TYN+LI G C     + A+RL
Sbjct: 376 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 435

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM+  G   +  +F  ++  LC +   D A R +  M+ R++ P     +TL+ G C 
Sbjct: 436 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 495

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK ++A EL+    + G   D  + N L++G C+  +++EA  + +E++ +G     V+
Sbjct: 496 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 555

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF---R 250
           YNTL  G     +++ A    +EM +  +  D  TY+  I GL     + EA++ +   +
Sbjct: 556 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 615

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
             G+L    D+  Y+ +IDG CK+ R E   E F  +  + +  + V YN +I   C  G
Sbjct: 616 RNGMLP---DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 672

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           ++  A +L  DM+   ++PN   + +LI G   I++  +   L  +M+ + + P+    +
Sbjct: 673 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 732

Query: 371 MVVD 374
            ++D
Sbjct: 733 ALID 736



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 169/371 (45%), Gaps = 36/371 (9%)

Query: 38  LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
           +F  +  + + P   T N L+  L  AN++ +    F +++ +GV P V  F   ++  C
Sbjct: 226 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFC 284

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K GK++EA +L   M +  V PN  T++T++DG  + G+ + A      M   G +   +
Sbjct: 285 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLI 344

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y+IL+ G  + K + +A  + +EM  KG  P V+ YN L     E   +  A+++ + M
Sbjct: 345 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 404

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC----------- 266
               ++  +STYNT I G CKNG    A  L + +  +   ++  ++             
Sbjct: 405 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 464

Query: 267 ------------------------LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
                                   LI GLCK G+   ALEL+     +  V D  T N +
Sbjct: 465 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 524

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           +HGLC  G++D+A  +  ++       + + + TLI G     K  +    L +M ++ +
Sbjct: 525 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 584

Query: 363 MPDASIVSMVV 373
            PD    S+++
Sbjct: 585 KPDNYTYSILI 595



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 122/235 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY+ +I GL     V++A   +   K   + PDV TY+ +I G C A    E + 
Sbjct: 585 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 644

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            F EMM + VQP+ V +N ++   C++G++  A  L + M  + + PN+ TY++L+ G  
Sbjct: 645 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 704

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           +  ++  A+ LF  M   G + +   Y  LI+GY K  ++ +   L REM SK + P  +
Sbjct: 705 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 764

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           TY  +  G      V  A +L  EM+   +  D+ TY  FI G  K G ++EA +
Sbjct: 765 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 144/300 (48%), Gaps = 9/300 (3%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G  C  + V+YNT+I G C +  +D+A     +M    + PD  TY+ LI GL + N  
Sbjct: 545 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 604

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            EA + + +    G+ P V T++V++D  CK  + +E     D M+ ++V+PN   Y+ L
Sbjct: 605 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 664

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +  +C +G+++ A EL   M+  G   +  +Y  LI G      VEEA  L+ EM  +G+
Sbjct: 665 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 724

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P V  Y  L  G  ++ Q+     L  EM   +V  +  TY   I G  ++G + EA  
Sbjct: 725 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 784

Query: 248 LF---RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           L    R  GI+    D   Y   I G  K G +   LE F+        A +  +N +I 
Sbjct: 785 LLNEMREKGIVP---DSITYKEFIYGYLKQGGV---LEAFKGSDEENYAAIIEGWNKLIQ 838



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 1/98 (1%)

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           +AL++F  L  + +     T NI++  L    +  K  + F D+    V+P+V +F T I
Sbjct: 222 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAI 280

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           + F +  K  + ++L  KM+E  V P+    + V+D L
Sbjct: 281 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL 318


>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 687

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 183/389 (47%), Gaps = 37/389 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQM--KGENINPDVVTYNSLIHGLCHANDWNEAK 71
           P+ VTYN+ I    K G   +A  L  QM    E I PDVVTYNS I    +   W EA 
Sbjct: 143 PDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAM 202

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +M+ QGV P+++T+N  +    K  + +EA  LL+ ++++   P+  TY+ ++D  
Sbjct: 203 DLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDAC 262

Query: 132 CLTGKINRAEELFG-----------------------------------SMESMGCKHDD 156
              G+   A +L G                                    M + G   + 
Sbjct: 263 AKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNV 322

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
           +SYN  I+   K    +EAL L REM + G+ PTV++YN+         +   AL+L +E
Sbjct: 323 ISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKE 382

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           M    +A +T +YN+ +D   K G   +AV+L R +  +  + DI ++N  ID   +  +
Sbjct: 383 MPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQ 442

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
            E A+EL R +P   L  +V+TYN  I       +  +A  LF +M    ++PNV+ + +
Sbjct: 443 WETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNS 502

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +I    +  +    ++LL  M  + V PD
Sbjct: 503 MIDACAKGEQWELAVQLLTGMPARGVAPD 531



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 174/360 (48%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + ++Y+++I    +     +A  L  QM+ + ++P+V++YNS I      + W EA  L 
Sbjct: 286 DVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLL 345

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM   G+ P+V+++N        NG+  EA  LL  M  + + PN  +Y++ +D     
Sbjct: 346 REMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKG 405

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+  +A +L   M ++G   D +S+N  I+   + ++ E A+ L REM + G+ P V+TY
Sbjct: 406 GQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITY 465

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N+         + + A+ LF EM    ++ +  TYN+ ID   K      AV+L   +  
Sbjct: 466 NSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPA 525

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                D+ +YN  I+   K  + E+AL+L + +P R    D+++YN  +      G+  +
Sbjct: 526 RGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWRE 585

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  L  DM    + PN + +   IH   +  +    + +L +M+     P+    S  +D
Sbjct: 586 ALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAID 645



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 171/361 (47%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN ++YN+ ID   K     +A  L  +M    + P V++YNS          W EA  L
Sbjct: 320 PNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALEL 379

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  QG+ P+ +++N  +D   K G+ ++A +LL  M      P+  ++++ +D    
Sbjct: 380 LKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGR 439

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +   A EL   M + G   + ++YN  I    ++   +EA+ L+REM ++G+ P VVT
Sbjct: 440 GQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVT 499

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN++     +  Q E A++L   M    VA D  +YN+ I+   K      A++L + + 
Sbjct: 500 YNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMP 559

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + DI +YN  +    KSGR   AL L + +    L  + V+Y   IH      Q D
Sbjct: 560 TRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWD 619

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  +  +M+ +   PN+I +   I    +  +  + ++LL  ++ + + PDA     V+
Sbjct: 620 VAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVI 679

Query: 374 D 374
            
Sbjct: 680 S 680



 Score =  148 bits (373), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/336 (24%), Positives = 155/336 (46%), Gaps = 2/336 (0%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G+V  P  ++YN+        G   +A  L  +M  + I P+ ++YNS +        W
Sbjct: 351 VGLV--PTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQW 408

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
            +A +L   M   G  P +++FN  +D   +  + + A  LL  M    + PN  TY++ 
Sbjct: 409 EKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSA 468

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           ++    + +   A  LF  M + G   + V+YN +I+   K ++ E A+ L   M ++G+
Sbjct: 469 IEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGV 528

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            P V++YN+      +  Q E AL+L + M       D  +YN+ +    K+G   EA+ 
Sbjct: 529 APDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALG 588

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L + +  +    +  +Y   I    K  + ++A+ + + +       +++TY+  I    
Sbjct: 589 LLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACA 648

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
             G+  +A DL  D+    + P+   ++T+I  F R
Sbjct: 649 KQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAFQR 684



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINP---------------DVVTYNSL 57
           +P+T +      G   +  V K K++ L+ KG +                  D  +YN  
Sbjct: 58  EPSTRSRGAASRGGKPKSLV-KLKSILLEAKGRDWRTALAALDEFKISGGSLDTTSYNIA 116

Query: 58  IHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ--R 115
           I    +   W  A RL  EM  +GV P VVT+N  +    K G+  EA  LL  MV    
Sbjct: 117 IAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTE 176

Query: 116 DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
            + P+  TY++ +      G+   A +L   M + G   + ++YN  I    K +  EEA
Sbjct: 177 GITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEA 236

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
           + L  E++ +G  P+  TYN +     +  +   A+ L  +M  +D+ AD  +Y++ I  
Sbjct: 237 MDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAA 296

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
             +     EA++L   +       ++ +YN  ID   K  R + AL+L R +    LV  
Sbjct: 297 CGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPT 356

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
           V++YN        +G+  +A +L  +M    +APN I + + +    +  +  K ++LL 
Sbjct: 357 VISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLR 416

Query: 356 KMKEKKVMPD 365
            M      PD
Sbjct: 417 GMSTVGSDPD 426



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 10/212 (4%)

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           K ++   AL+   E    G      +YN          Q   A++L  EM  + V  D  
Sbjct: 87  KGRDWRTALAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVV 146

Query: 228 TYNTFIDGLCKNGYIVEAVELFR-----TLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
           TYN+ I    K G   EA++L       T GI     D+  YN  I      GR + A++
Sbjct: 147 TYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITP---DVVTYNSAIAACSNGGRWKEAMD 203

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDG-QMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           L   +  + +  +++TYN  I G C  G + ++A DL  ++ E    P+   +  +I   
Sbjct: 204 LLEQMVAQGVPPNLITYNSAI-GACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDAC 262

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            +  +  + ++LL +M    +  D    S V+
Sbjct: 263 AKGGRWLEAMDLLGQMLTNDIPADVISYSSVI 294


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 197/372 (52%), Gaps = 12/372 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VT+ T+I+G CK G +D+A  LF  M+   I PD++ Y++LI G   A       +L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F + + +GV+  VV F+  +D   K+G +  AS +   M+ + + PN  TY+ L+ G C 
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+I  A  ++G +   G +   V+Y+ LI+G+CK   +    +LY +M+  G  P VV 
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +   + HA++   +M    +  +   +N+ IDG C+     EA+++FR +G
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523

Query: 254 ILKCELDIQAYNCLI------DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           I   + D+  +  ++      D  CK  +  I L+LF  + R  + AD+   N++IH L 
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLF 583

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV---RINKPSKVIELLHKMKEKKVMP 364
              +++ A   F ++ E  + P+++ + T+I G+    R+++  ++ ELL   K     P
Sbjct: 584 KCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL---KVTPFGP 640

Query: 365 DASIVSMVVDLL 376
           +   +++++ +L
Sbjct: 641 NTVTLTILIHVL 652



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 182/359 (50%), Gaps = 6/359 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTY+++IDG CK G +    AL+  M      PDVV Y  L+ GL        A R
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM---- 128
              +M+ Q ++ +VV FN ++D  C+  + DEA ++  LM    ++P+  T++T+M    
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI 542

Query: 129 --DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
             D FC   K     +LF  M+      D    N++I+   K   +E+A   +  ++   
Sbjct: 543 MEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 602

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           ++P +VTYNT+  G   + +++ A ++FE ++      +T T    I  LCKN  +  A+
Sbjct: 603 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 662

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            +F  +     + +   Y CL+D   KS  +E + +LF  +  + +   +V+Y+I+I GL
Sbjct: 663 RMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGL 722

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           C  G++D+A ++F    +  + P+V+ +  LI G+ ++ +  +   L   M    V PD
Sbjct: 723 CKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 185/371 (49%), Gaps = 8/371 (2%)

Query: 13  KPNTVT-YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           +P+ V+ +  ++D L  +G V KA      +        +V+ N ++ GL   +    A 
Sbjct: 213 EPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVAS 271

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL   ++D G  P+VVTF  +++  CK G+MD A  L  +M QR + P+   YSTL+DG+
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G +    +LF      G K D V ++  I+ Y K+ ++  A  +Y+ M+ +GI P V
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY  L  GL +  ++  A  ++ ++ +  +     TY++ IDG CK G +     L+  
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +  +    D+  Y  L+DGL K G +  A+     +  + +  +VV +N +I G C   +
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIH------GFVRINKPSKVIELLHKMKEKKVMPD 365
            D+A  +F  M    + P+V  F T++        F +  KP+  ++L   M+  K+  D
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISAD 571

Query: 366 ASIVSMVVDLL 376
            ++ ++V+ LL
Sbjct: 572 IAVCNVVIHLL 582



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 159/393 (40%), Gaps = 89/393 (22%)

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ------------R 115
           N A + F      G  PS   F  I   L +NG  D A ++ D M+             R
Sbjct: 84  NSALKYFRWAEISGKDPS---FYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIR 140

Query: 116 DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC--KHDDV---------------- 157
           D   +A     LM+  C  G +++A E+F     +G     D V                
Sbjct: 141 DRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLI 200

Query: 158 --SYNILING-----------------YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
              ++ L  G                 +CK  EV +AL  +R ++ +G +  +V+ N + 
Sbjct: 201 ADHFDKLCRGGIEPSGVSAHGFVLDALFCKG-EVTKALDFHRLVMERGFRVGIVSCNKVL 259

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            GL  + Q+E A +L   +     A +  T+ T I+G CK G +  A +LF+ +     E
Sbjct: 260 KGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE 318

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRS-------------------------------L 287
            D+ AY+ LIDG  K+G L +  +LF                                 +
Sbjct: 319 PDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378

Query: 288 PRRVLV----ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            +R+L      +VVTY I+I GLC DG++ +A  ++  + +  + P+++ + +LI GF +
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438

Query: 344 INKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                    L   M +    PD  I  ++VD L
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 176/333 (52%), Gaps = 1/333 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+  TYN +I+ LCKEG  + A     +   + + P+ ++Y  LI   C + +++ A 
Sbjct: 341 CKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIAS 400

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  +M ++G +P +VT+ +++  L  +G MD+A  +   ++ R V P+A  Y+ LM G 
Sbjct: 401 KLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C TG+   A+ LF  M       D   Y  LI+G+ ++ + +EA  ++   V KG+K  V
Sbjct: 461 CKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDV 520

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V +N +  G      ++ AL     M  + +  D  TY+T IDG  K   +  A+++FR 
Sbjct: 521 VHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRY 580

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   KC+ ++  Y  LI+G C  G  ++A E F+ +  R LV +VVTY  +I  L  +  
Sbjct: 581 MEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESS 640

Query: 312 -MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            ++KA   +  M  N   PN + F  L+ GFV+
Sbjct: 641 TLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK 673



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 201/407 (49%), Gaps = 37/407 (9%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G  G  C PN V YNTII G CK G ++ A  +F ++K +   P + T+ ++I+G C   
Sbjct: 230 GRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEG 289

Query: 66  DWNEAKRLFFEMMDQGV-----------------------------------QPSVVTFN 90
           D+  + RL  E+ ++G+                                   +P V T+N
Sbjct: 290 DFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYN 349

Query: 91  VIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
           ++++ LCK GK + A   LD   ++ + PN  +Y+ L+  +C + + + A +L   M   
Sbjct: 350 ILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAER 409

Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
           GCK D V+Y ILI+G   +  +++A+++  +++ +G+ P    YN L  GL +  +   A
Sbjct: 410 GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPA 469

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK-CELDIQAYNCLID 269
             LF EM   ++  D   Y T IDG  ++G   EA ++F +L + K  ++D+  +N +I 
Sbjct: 470 KLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVF-SLSVEKGVKVDVVHHNAMIK 528

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
           G C+SG L+ AL     +    LV D  TY+ +I G      M  A  +F  ME+N   P
Sbjct: 529 GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP 588

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           NV+ + +LI+GF          E   +M+ + ++P+    + ++  L
Sbjct: 589 NVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSL 635



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 173/378 (45%), Gaps = 50/378 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN ++Y  +I   CK    D A  L LQM      PD+VTY  LIHGL  +   ++A  +
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +++D+GV P    +N++M  LCK G+   A  L   M+ R++ P+A+ Y+TL+DGF  
Sbjct: 438 KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR 497

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G  + A ++F      G K D V +N +I G+C++  ++EAL+    M  + + P   T
Sbjct: 498 SGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFT 557

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y+T+  G  +   +  A+K+F  M+++    +  TY + I+G C  G    A E F+ + 
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQ 617

Query: 254 ILKCELDIQAYNCLIDGLCK-SGRLEIALELFRSLPRRVLVADVVTYNIMIHGL------ 306
           +     ++  Y  LI  L K S  LE A+  +  +     V + VT+N ++ G       
Sbjct: 618 LRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSG 677

Query: 307 --------CNDGQ----------------------------------MDKAHDLFLD-ME 323
                    N GQ                                  M K   +F D M 
Sbjct: 678 KVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMV 737

Query: 324 ENAVAPNVIIFVTLIHGF 341
           +   +P+ + F  ++HGF
Sbjct: 738 KKGFSPDPVSFAAILHGF 755



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 172/354 (48%), Gaps = 2/354 (0%)

Query: 22  IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG 81
           ++ G+C EG V+  + L     G+   P++V YN++I G C   D   A  +F E+  +G
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG 270

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG-KINRA 140
             P++ TF  +++  CK G    + RLL  + +R +R + +  + ++D     G K++ A
Sbjct: 271 FMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPA 330

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
           E + G + +  CK D  +YNILIN  CK  + E A+    E   KG+ P  ++Y  L   
Sbjct: 331 ESI-GWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQA 389

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
             +  + + A KL  +M       D  TY   I GL  +G++ +AV +   L       D
Sbjct: 390 YCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
              YN L+ GLCK+GR   A  LF  +  R ++ D   Y  +I G    G  D+A  +F 
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS 509

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
              E  V  +V+    +I GF R     + +  +++M E+ ++PD    S ++D
Sbjct: 510 LSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID 563



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 155/320 (48%), Gaps = 15/320 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   YN ++ GLCK G    AK LF +M   NI PD   Y +LI G   + D++EA+++
Sbjct: 448 PDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKV 507

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F   +++GV+  VV  N ++   C++G +DEA   ++ M +  + P+ FTYST++DG+  
Sbjct: 508 FSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +  A ++F  ME   CK + V+Y  LING+C   + + A   ++EM  + + P VVT
Sbjct: 568 QQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVT 627

Query: 194 YNTLFLGLF-EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK-------------- 238
           Y TL   L  E   +E A+  +E M  +    +  T+N  + G  K              
Sbjct: 628 YTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSN 687

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           +G      E F  +          AYN  +  LC  G ++ A      + ++    D V+
Sbjct: 688 HGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVS 747

Query: 299 YNIMIHGLCNDGQMDKAHDL 318
           +  ++HG C  G   +  ++
Sbjct: 748 FAAILHGFCVVGNSKQWRNM 767



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 161/338 (47%), Gaps = 5/338 (1%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLF---FEMMDQGVQPSVVTFNVIMDELCK 98
           ++ EN+       + ++H    +   ++A  ++    E+ D    P V+  N ++  L K
Sbjct: 125 LRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDS--VPDVIACNSLLSLLVK 182

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           + ++ +A ++ D M  R    + ++   L+ G C  GK+    +L       GC  + V 
Sbjct: 183 SRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVF 242

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN +I GYCK  ++E A  +++E+  KG  PT+ T+ T+  G  +      + +L  E++
Sbjct: 243 YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVK 302

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +       N  ID   ++GY V+  E    +    C+ D+  YN LI+ LCK G+ E
Sbjct: 303 ERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKE 362

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           +A+       ++ L+ + ++Y  +I   C   + D A  L L M E    P+++ +  LI
Sbjct: 363 VAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILI 422

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           HG V        + +  K+ ++ V PDA+I +M++  L
Sbjct: 423 HGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 92/226 (40%), Gaps = 52/226 (23%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN VTY ++I+G C +G    A+  F +M+  ++ P+VVTY +LI  L   +   E  
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKA 645

Query: 72  RLFFE-MMDQGVQPSVVTFNVIMDE----------------------------------- 95
             ++E MM     P+ VTFN ++                                     
Sbjct: 646 VYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDG 705

Query: 96  --------------LCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
                         LC +G +  A    D MV++   P+  +++ ++ GFC+ G   +  
Sbjct: 706 WSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWR 765

Query: 142 EL-FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
            + F ++   G +   V Y+ ++  +     + EA ++   MV K 
Sbjct: 766 NMDFCNLGEKGLEV-AVRYSQVLEQHLPQPVICEASTILHAMVEKA 810


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 194/360 (53%), Gaps = 1/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V++N+I+ G CK GFVD AK+ F  +    + P V ++N LI+GLC      EA  L
Sbjct: 233 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 292

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   GV+P  VT+N++       G +  A  ++  M+ + + P+  TY+ L+ G C 
Sbjct: 293 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 352

Query: 134 TGKINRAEELFGSMESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            G I+    L   M S G + + +   +++++G CK   ++EALSL+ +M + G+ P +V
Sbjct: 353 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 412

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ +  GL ++ + + AL L++EM    +  ++ T+   + GLC+ G ++EA  L  +L
Sbjct: 413 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 472

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 LDI  YN +IDG  KSG +E ALELF+ +    +   V T+N +I+G C    +
Sbjct: 473 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 532

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  +   ++   +AP+V+ + TL+  +        + EL  +MK + + P     S++
Sbjct: 533 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 592



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 166/350 (47%), Gaps = 12/350 (3%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           + ++ GLCK G +D+A +LF QMK + ++PD+V Y+ +IHGLC    ++ A  L+ EM D
Sbjct: 380 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 439

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
           + + P+  T   ++  LC+ G + EA  LLD ++      +   Y+ ++DG+  +G I  
Sbjct: 440 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 499

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A ELF  +   G      ++N LI GYCK + + EA  +   +   G+ P+VV+Y TL  
Sbjct: 500 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 559

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
                   +   +L  EM+ + +     TY+    GLC+         + R     KC+ 
Sbjct: 560 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 619

Query: 260 DIQ------------AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            ++             YN +I  LC+   L  A      +  R L A   TYNI+I  LC
Sbjct: 620 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 679

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
             G + KA      ++E  V+ +   + TLI        P   ++L H++
Sbjct: 680 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQL 729



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 177/399 (44%), Gaps = 57/399 (14%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINP------------------------ 49
           P+ V Y+ +I GLCK G  D A  L+ +M  + I P                        
Sbjct: 409 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 468

Query: 50  -----------DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                      D+V YN +I G   +    EA  LF  +++ G+ PSV TFN ++   CK
Sbjct: 469 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 528

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
              + EA ++LD++    + P+  +Y+TLMD +   G     +EL   M++ G    +V+
Sbjct: 529 TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVT 588

Query: 159 YNILINGYCKNKEVEEALSLYRE------------MVSKGIKPTVVTYNTLFLGLFEIHQ 206
           Y+++  G C+  + E    + RE            M S+GI P  +TYNT+   L  +  
Sbjct: 589 YSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKH 648

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           +  A    E M+  ++ A ++TYN  ID LC  GYI +A     +L      L   AY  
Sbjct: 649 LSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTT 708

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LI   C  G  E+A++LF  L  R     +  Y+ +I+ LC    ++++   F  M    
Sbjct: 709 LIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQG 768

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++P++ I   +I          K  ELL    +  ++PD
Sbjct: 769 ISPDLDICEVMI----------KSDELLSWTIKWGLLPD 797



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 183/407 (44%), Gaps = 64/407 (15%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIH----------------------------GLCH 63
           VD +  +  +MK +N+N    +YNS+++                            GLC 
Sbjct: 153 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCR 212

Query: 64  ANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
                +A         + + PSVV+FN IM   CK G +D A      +++  + P+ ++
Sbjct: 213 QQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYS 272

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           ++ L++G CL G I  A EL   M   G + D V+YNIL  G+     +  A  + R+M+
Sbjct: 273 HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDML 332

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCKNGYI 242
            KG+ P V+TY  L  G  ++  ++  L L ++M  R          +  + GLCK G I
Sbjct: 333 DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRI 392

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF------RSLP-------- 288
            EA+ LF  +       D+ AY+ +I GLCK G+ ++AL L+      R LP        
Sbjct: 393 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 452

Query: 289 -------------RRVL--------VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
                        R +L          D+V YNI+I G    G +++A +LF  + E  +
Sbjct: 453 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 512

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            P+V  F +LI+G+ +    ++  ++L  +K   + P     + ++D
Sbjct: 513 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 559



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 174/377 (46%), Gaps = 13/377 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P++VTYN +  G    G +  A  +   M  + ++PDV+TY  L+ G C   + +    
Sbjct: 302 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLV 361

Query: 73  LFFEMMDQGVQ-PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           L  +M+ +G +  S++  +V++  LCK G++DEA  L + M    + P+   YS ++ G 
Sbjct: 362 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 421

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK + A  L+  M       +  ++  L+ G C+   + EA SL   ++S G    +
Sbjct: 422 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDI 481

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YN +  G  +   +E AL+LF+ +    +    +T+N+ I G CK   I EA ++   
Sbjct: 482 VLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDV 541

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +      + +Y  L+D     G  +   EL R +    +    VTY+++  GLC   +
Sbjct: 542 IKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK 601

Query: 312 ------------MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
                        +K      DME   + P+ I + T+I    R+   S     L  MK 
Sbjct: 602 HENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKS 661

Query: 360 KKVMPDASIVSMVVDLL 376
           + +   ++  ++++D L
Sbjct: 662 RNLDASSATYNILIDSL 678


>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 194/360 (53%), Gaps = 1/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V++N+I+ G CK GFVD AK+ F  +    + P V ++N LI+GLC      EA  L
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   GV+P  VT+N++       G +  A  ++  M+ + + P+  TY+ L+ G C 
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339

Query: 134 TGKINRAEELFGSMESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            G I+    L   M S G + + +   +++++G CK   ++EALSL+ +M + G+ P +V
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ +  GL ++ + + AL L++EM    +  ++ T+   + GLC+ G ++EA  L  +L
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 LDI  YN +IDG  KSG +E ALELF+ +    +   V T+N +I+G C    +
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  +   ++   +AP+V+ + TL+  +        + EL  +MK + + P     S++
Sbjct: 520 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 579



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 166/350 (47%), Gaps = 12/350 (3%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           + ++ GLCK G +D+A +LF QMK + ++PD+V Y+ +IHGLC    ++ A  L+ EM D
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
           + + P+  T   ++  LC+ G + EA  LLD ++      +   Y+ ++DG+  +G I  
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A ELF  +   G      ++N LI GYCK + + EA  +   +   G+ P+VV+Y TL  
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
                   +   +L  EM+ + +     TY+    GLC+         + R     KC+ 
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606

Query: 260 DIQ------------AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            ++             YN +I  LC+   L  A      +  R L A   TYNI+I  LC
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
             G + KA      ++E  V+ +   + TLI        P   ++L H++
Sbjct: 667 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQL 716



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 155/312 (49%), Gaps = 12/312 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN+ T+  ++ GLC++G + +A++L   +       D+V YN +I G   +    EA  L
Sbjct: 431 PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALEL 490

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  +++ G+ PSV TFN ++   CK   + EA ++LD++    + P+  +Y+TLMD +  
Sbjct: 491 FKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYAN 550

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE------------ 181
            G     +EL   M++ G    +V+Y+++  G C+  + E    + RE            
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRD 610

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M S+GI P  +TYNT+   L  +  +  A    E M+  ++ A ++TYN  ID LC  GY
Sbjct: 611 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGY 670

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           I +A     +L      L   AY  LI   C  G  E+A++LF  L  R     +  Y+ 
Sbjct: 671 IRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSA 730

Query: 302 MIHGLCNDGQMD 313
           +I+ LC    M+
Sbjct: 731 VINRLCRRHLMN 742



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 183/407 (44%), Gaps = 64/407 (15%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIH----------------------------GLCH 63
           VD +  +  +MK +N+N    +YNS+++                            GLC 
Sbjct: 140 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCR 199

Query: 64  ANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
                +A         + + PSVV+FN IM   CK G +D A      +++  + P+ ++
Sbjct: 200 QQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYS 259

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           ++ L++G CL G I  A EL   M   G + D V+YNIL  G+     +  A  + R+M+
Sbjct: 260 HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDML 319

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCKNGYI 242
            KG+ P V+TY  L  G  ++  ++  L L ++M  R          +  + GLCK G I
Sbjct: 320 DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRI 379

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF------RSLP-------- 288
            EA+ LF  +       D+ AY+ +I GLCK G+ ++AL L+      R LP        
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439

Query: 289 -------------RRVL--------VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
                        R +L          D+V YNI+I G    G +++A +LF  + E  +
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            P+V  F +LI+G+ +    ++  ++L  +K   + P     + ++D
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 174/377 (46%), Gaps = 13/377 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P++VTYN +  G    G +  A  +   M  + ++PDV+TY  L+ G C   + +    
Sbjct: 289 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLV 348

Query: 73  LFFEMMDQGVQ-PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           L  +M+ +G +  S++  +V++  LCK G++DEA  L + M    + P+   YS ++ G 
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 408

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK + A  L+  M       +  ++  L+ G C+   + EA SL   ++S G    +
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDI 468

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YN +  G  +   +E AL+LF+ +    +    +T+N+ I G CK   I EA ++   
Sbjct: 469 VLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDV 528

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +      + +Y  L+D     G  +   EL R +    +    VTY+++  GLC   +
Sbjct: 529 IKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK 588

Query: 312 ------------MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
                        +K      DME   + P+ I + T+I    R+   S     L  MK 
Sbjct: 589 HENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKS 648

Query: 360 KKVMPDASIVSMVVDLL 376
           + +   ++  ++++D L
Sbjct: 649 RNLDASSATYNILIDSL 665


>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/377 (31%), Positives = 196/377 (51%), Gaps = 21/377 (5%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKAL--FLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           CKPN +TYNTIID  C +G VD  +AL  F +M+ E + PD +T+NSLI        W +
Sbjct: 266 CKPNLITYNTIIDA-CGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWED 324

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           ++R+F EM  +G++  + TFN ++D +CK G+M+ A+ ++  M  +++ PN  TYST++D
Sbjct: 325 SQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMID 384

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G+   G    A  L+  M+  G + D VSYN LI+ Y K    ++AL   ++M   G+K 
Sbjct: 385 GYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKA 444

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            VVTYN L     +  + + A  LF++M+ + +  +  TY+  ID   K G   +   +F
Sbjct: 445 DVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVF 504

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
                   + D+  Y+ LID  CK G +E A+ L + + +  +  ++VTYN +I      
Sbjct: 505 TEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRY 564

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFV-TLIHGFVRINKPSK-----------VIELLHKM 357
           GQ DK   +  +M      PN +  +       VR   PS+            + + H+M
Sbjct: 565 GQADKLEAVKANM------PNSVQKIGERSMEVVRKPPPSQQNASDHTGVLAAVSVFHEM 618

Query: 358 KEKKVMPDASIVSMVVD 374
           ++  + P+    S +++
Sbjct: 619 QQFGLKPNVVTFSAILN 635



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 174/354 (49%), Gaps = 1/354 (0%)

Query: 22  IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG 81
           +I  L + G V+ A  +F + +      +V  Y++++     +    EA ++F  M   G
Sbjct: 206 MISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAG 265

Query: 82  VQPSVVTFNVIMDELCKNG-KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
            +P+++T+N I+D   K G  + +A  + D M +  V P+  T+++L+      G    +
Sbjct: 266 CKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDS 325

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
           + +F  M+  G + D  ++N LI+  CK  ++E A S+   M  K I P VVTY+T+  G
Sbjct: 326 QRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDG 385

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
             ++   E A+ L+ +M+   V  D  +YNT ID   K G   +A+   + +  +  + D
Sbjct: 386 YGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKAD 445

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           +  YN LID   K G+ + A  LF  +    LV +V+TY+ +I      G      ++F 
Sbjct: 446 VVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFT 505

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + +   + P+V+++ +LI    +       + LL +M +  + P+    + ++D
Sbjct: 506 EFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLID 559



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 165/361 (45%), Gaps = 48/361 (13%)

Query: 57  LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVT--FNVIMDELCKNGKMDEASRLLDLMVQ 114
           L+  L +  +W  A + +  M+ Q    S  +   ++++  L + GK++ A  + +   +
Sbjct: 169 LLRELGNRGEWERALQGYEWMVQQVHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQK 228

Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK-EVE 173
                N + YS ++  +  +G+   A ++F +M+  GCK + ++YN +I+   K   +++
Sbjct: 229 AGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLK 288

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFL-----GLFEIHQVEHALKLFEEMQRDDVAADTST 228
           +AL ++ EM  +G++P  +T+N+L       GL+E  Q     ++F EMQR  +  D  T
Sbjct: 289 QALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQ-----RVFAEMQRRGIEQDIFT 343

Query: 229 YNTFIDGLCKNGYIVEAVELFRTL-------------------GILKC------------ 257
           +NT ID +CK G +  A  +  T+                   G L C            
Sbjct: 344 FNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMK 403

Query: 258 ----ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 D  +YN LID   K GR + AL   + + R  L ADVVTYN +I      G+  
Sbjct: 404 ESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYK 463

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  LF  M+   + PNV+ +  LI  + +      V  +  + K   + PD  + S ++
Sbjct: 464 DAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLI 523

Query: 374 D 374
           D
Sbjct: 524 D 524



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 145/351 (41%), Gaps = 74/351 (21%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY+T+IDG  K G  ++A +L+  MK   + PD V+YN+LI        +++A   
Sbjct: 374 PNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIA 433

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   G++  VVT+N ++D   K GK  +A+ L D M    + PN  TYS L+D +  
Sbjct: 434 CKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSK 493

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G       +F   +  G K D V Y+ LI+  CK   VE+A+ L +EM   GI+P +VT
Sbjct: 494 AGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVT 553

Query: 194 YNTLFLGLFEIHQVEH-----------------------------------------ALK 212
           YN+L        Q +                                          A+ 
Sbjct: 554 YNSLIDAYGRYGQADKLEAVKANMPNSVQKIGERSMEVVRKPPPSQQNASDHTGVLAAVS 613

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCK-----------------NGYI------------- 242
           +F EMQ+  +  +  T++  ++   +                 +G++             
Sbjct: 614 VFHEMQQFGLKPNVVTFSAILNACSRCASLQEASVLLEQMRFFDGWVYGIAHGLLMGLRE 673

Query: 243 ---VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
              VEA  LF  +  +        YN L D L   G+ + A E+  +  RR
Sbjct: 674 QVWVEAQRLFDEISRMDYATGAAFYNALTDVLWHFGQRQGAQEVVVAAKRR 724



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 1/217 (0%)

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           +I+I+   +  +VE AL ++      G    V  Y+ +        +   ALK+F+ M++
Sbjct: 204 SIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKK 263

Query: 220 DDVAADTSTYNTFIDGLCKNGY-IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
                +  TYNT ID   K G  + +A+++F  +     E D   +N LI    + G  E
Sbjct: 264 AGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWE 323

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            +  +F  + RR +  D+ T+N +I  +C  GQM+ A  +   M    ++PNV+ + T+I
Sbjct: 324 DSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMI 383

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
            G+ ++    + I L H MKE  V PD    + ++D+
Sbjct: 384 DGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDI 420



 Score = 45.1 bits (105), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 18/128 (14%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA-------N 65
           KPN VT++ I++   +   + +A  L  QM+          ++  ++G+ H         
Sbjct: 624 KPNVVTFSAILNACSRCASLQEASVLLEQMR---------FFDGWVYGIAHGLLMGLREQ 674

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
            W EA+RLF E+           +N + D L   G+   A  ++    +R V  NA+  S
Sbjct: 675 VWVEAQRLFDEISRMDYATGAAFYNALTDVLWHFGQRQGAQEVVVAAKRRQVWENAWWRS 734

Query: 126 TLMDGFCL 133
                FCL
Sbjct: 735 EQQ--FCL 740


>gi|255661006|gb|ACU25672.1| pentatricopeptide repeat-containing protein [Lantana canescens]
          Length = 376

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 181/339 (53%), Gaps = 1/339 (0%)

Query: 27  CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           C+ G +D A+ ++  +    ++PD V YN++++G   A    +   L+ EMM +    SV
Sbjct: 1   CESGDIDGAERVYKDIVESKVSPDAVVYNAMLNGFYRAGRMKDCFELW-EMMGREGSRSV 59

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
            +FN++M  L  N K++EA  + +LM +     ++ TY  L+ GFC  G IN++  +   
Sbjct: 60  ASFNIMMRGLFDNRKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEI 119

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
            E  G   D  +Y+ +IN  CK  ++E+A+S+   M+  G KP    YN L  GL    +
Sbjct: 120 AEQKGGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASK 179

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
            + A+++F EM   D   + +TY+  IDGLCK     EA +L + +        +  Y+ 
Sbjct: 180 RDDAVRIFREMGTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSL 239

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           L+ GLC   ++E+AL+L+  + ++    DV  +NI+IHGLC+ G+   A  L+LDM    
Sbjct: 240 LMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWN 299

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            APN++   TL+ GF +       + +  ++ + ++ PD
Sbjct: 300 CAPNLVTQNTLMEGFYKDGNVRNALVIWARILKNELQPD 338



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 160/318 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +  ++N ++ GL     V++A +++  M       D VTY  L+HG C     N++  + 
Sbjct: 58  SVASFNIMMRGLFDNRKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHIL 117

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
                +G       ++ +++ LCK  K+++A  +L+ M++   +PN   Y+ L+ G    
Sbjct: 118 EIAEQKGGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGA 177

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            K + A  +F  M +  C  +  +Y+ILI+G CK +   EA  L +EM+ KG+ P+V+TY
Sbjct: 178 SKRDDAVRIFREMGTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITY 237

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + L  GL   H+VE AL+L+ ++ +     D   +N  I GLC  G    A+ L+  +  
Sbjct: 238 SLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNR 297

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C  ++   N L++G  K G +  AL ++  + +  L  D+++YNI + GLC+  ++  
Sbjct: 298 WNCAPNLVTQNTLMEGFYKDGNVRNALVIWARILKNELQPDIISYNITLKGLCSCNRISD 357

Query: 315 AHDLFLDMEENAVAPNVI 332
           A     D     + P  I
Sbjct: 358 AIWFLHDAVRKKIIPTKI 375



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 146/286 (51%), Gaps = 4/286 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           ++VTY  ++ G CK G+++K+  +    + +    D   Y+++I+ LC  +   +A  + 
Sbjct: 93  DSVTYGILVHGFCKNGYINKSLHILEIAEQKGGVLDAFAYSAMINALCKESKLEKAVSVL 152

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M+  G +P+   +N ++  L    K D+A R+   M   D  PN  TYS L+DG C  
Sbjct: 153 NGMIRSGCKPNTHVYNALIKGLIGASKRDDAVRIFREMGTTDCPPNIATYSILIDGLCKG 212

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            +   A +L   M   G     ++Y++L+ G C   +VE AL L+ ++  KG KP V  +
Sbjct: 213 ERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMH 272

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L  GL  + + + AL L+ +M R + A +  T NT ++G  K+G +  A+ ++    I
Sbjct: 273 NILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQNTLMEGFYKDGNVRNALVIWAR--I 330

Query: 255 LKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           LK EL  DI +YN  + GLC   R+  A+       R+ ++   +T
Sbjct: 331 LKNELQPDIISYNITLKGLCSCNRISDAIWFLHDAVRKKIIPTKIT 376



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 143/277 (51%), Gaps = 1/277 (0%)

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           C++G +D A R+   +V+  V P+A  Y+ +++GF   G++    EL+  M   G +   
Sbjct: 1   CESGDIDGAERVYKDIVESKVSPDAVVYNAMLNGFYRAGRMKDCFELWEMMGREGSR-SV 59

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            S+NI++ G   N++VEEA+S++  M   G     VTY  L  G  +   +  +L + E 
Sbjct: 60  ASFNIMMRGLFDNRKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEI 119

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
            ++     D   Y+  I+ LCK   + +AV +   +    C+ +   YN LI GL  + +
Sbjct: 120 AEQKGGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASK 179

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
            + A+ +FR +       ++ TY+I+I GLC   +  +A+DL  +M E  + P+VI +  
Sbjct: 180 RDDAVRIFREMGTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSL 239

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           L+ G    +K    ++L +++ +K   PD  + ++++
Sbjct: 240 LMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILI 276



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 116/218 (53%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           NG I   CKPNT  YN +I GL      D A  +F +M   +  P++ TY+ LI GLC  
Sbjct: 153 NGMIRSGCKPNTHVYNALIKGLIGASKRDDAVRIFREMGTTDCPPNIATYSILIDGLCKG 212

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
             + EA  L  EM+++G+ PSV+T++++M  LC   K++ A +L + + ++  +P+   +
Sbjct: 213 ERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMH 272

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + L+ G C  GK   A  L+  M    C  + V+ N L+ G+ K+  V  AL ++  ++ 
Sbjct: 273 NILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQNTLMEGFYKDGNVRNALVIWARILK 332

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
             ++P +++YN    GL   +++  A+    +  R  +
Sbjct: 333 NELQPDIISYNITLKGLCSCNRISDAIWFLHDAVRKKI 370



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 98/188 (52%), Gaps = 1/188 (0%)

Query: 7   EIGVV-CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           E+G   C PN  TY+ +IDGLCK     +A  L  +M  + +NP V+TY+ L+ GLC  +
Sbjct: 189 EMGTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLGH 248

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
               A +L+ ++  +G +P V   N+++  LC  GK   A  L   M + +  PN  T +
Sbjct: 249 KVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQN 308

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TLM+GF   G +  A  ++  +     + D +SYNI + G C    + +A+    + V K
Sbjct: 309 TLMEGFYKDGNVRNALVIWARILKNELQPDIISYNITLKGLCSCNRISDAIWFLHDAVRK 368

Query: 186 GIKPTVVT 193
            I PT +T
Sbjct: 369 KIIPTKIT 376



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 103/210 (49%), Gaps = 1/210 (0%)

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           C++ +++ A  +Y+++V   + P  V YN +  G +   +++   +L+E M R+  +   
Sbjct: 1   CESGDIDGAERVYKDIVESKVSPDAVVYNAMLNGFYRAGRMKDCFELWEMMGREG-SRSV 59

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
           +++N  + GL  N  + EA+ ++  +       D   Y  L+ G CK+G +  +L +   
Sbjct: 60  ASFNIMMRGLFDNRKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEI 119

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
             ++  V D   Y+ MI+ LC + +++KA  +   M  +   PN  ++  LI G +  +K
Sbjct: 120 AEQKGGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASK 179

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               + +  +M      P+ +  S+++D L
Sbjct: 180 RDDAVRIFREMGTTDCPPNIATYSILIDGL 209


>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
 gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g39230, mitochondrial; AltName: Full=Protein LATERAL
           ORGAN JUNCTION; Flags: Precursor
 gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
 gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
          Length = 867

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 196/359 (54%), Gaps = 9/359 (2%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N I    CK+G VD A +    M+ + I P+VV YN+++   C   + + A+ +F EM++
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
           +G++P+  T+++++D   KN     A  +++ M   +   N   Y+T+++G C  G+ ++
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572

Query: 140 AEELFGSM-----ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           A+E+  ++      SM C     SYN +I+G+ K  + + A+  YREM   G  P VVT+
Sbjct: 573 AKEMLQNLIKEKRYSMSC----TSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTF 628

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            +L  G  + ++++ AL++  EM+  ++  D   Y   IDG CK   +  A  LF  L  
Sbjct: 629 TSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPE 688

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
           L    ++  YN LI G    G+++ A++L++ +    +  D+ TY  MI GL  DG ++ 
Sbjct: 689 LGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINL 748

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           A DL+ ++ +  + P+ I+ + L++G  +  +  K  ++L +MK+K V P+  + S V+
Sbjct: 749 ASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVI 807



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 175/345 (50%), Gaps = 2/345 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V ++ +++  CK   ++KA   +++MK   I P  V  +++I G   A     A  +
Sbjct: 378 PDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEI 437

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F +  +  +    +  N I    CK GK+D A+  L +M Q+ + PN   Y+ +M   C 
Sbjct: 438 FNDSFESWIAHGFMC-NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCR 496

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              ++ A  +F  M   G + ++ +Y+ILI+G+ KNK+ + A  +  +M +   +   V 
Sbjct: 497 MKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVI 556

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDD-VAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           YNT+  GL ++ Q   A ++ + + ++   +   ++YN+ IDG  K G    AVE +R +
Sbjct: 557 YNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREM 616

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++  +  LI+G CKS R+++ALE+   +    L  D+  Y  +I G C    M
Sbjct: 617 SENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDM 676

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
             A+ LF ++ E  + PNV ++ +LI GF  + K    I+L  KM
Sbjct: 677 KTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM 721



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 179/336 (53%), Gaps = 3/336 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN  TY+ +IDG  K      A  +  QM   N   + V YN++I+GLC     ++AK 
Sbjct: 516 EPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKE 575

Query: 73  LFFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +   ++ ++    S  ++N I+D   K G  D A      M +    PN  T+++L++GF
Sbjct: 576 MLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGF 635

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C + +++ A E+   M+SM  K D  +Y  LI+G+CK  +++ A +L+ E+   G+ P V
Sbjct: 636 CKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNV 695

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             YN+L  G   + +++ A+ L+++M  D ++ D  TY T IDGL K+G I  A +L+  
Sbjct: 696 SVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSE 755

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L  L    D   +  L++GL K G+   A ++   + ++ +  +V+ Y+ +I G   +G 
Sbjct: 756 LLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGN 815

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
           +++A  L  +M E  +  +  +F  L+ G  R+ KP
Sbjct: 816 LNEAFRLHDEMLEKGIVHDDTVFNLLVSG--RVEKP 849



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 190/362 (52%), Gaps = 1/362 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN V YN ++   C+   +D A+++F +M  + + P+  TY+ LI G     D   A  
Sbjct: 481 EPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWD 540

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDVRPNAFTYSTLMDGF 131
           +  +M     + + V +N I++ LCK G+  +A  +L +L+ ++    +  +Y++++DGF
Sbjct: 541 VINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGF 600

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G  + A E +  M   G   + V++  LING+CK+  ++ AL +  EM S  +K  +
Sbjct: 601 VKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDL 660

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y  L  G  + + ++ A  LF E+    +  + S YN+ I G    G +  A++L++ 
Sbjct: 661 PAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKK 720

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +       D+  Y  +IDGL K G + +A +L+  L    +V D + + ++++GL   GQ
Sbjct: 721 MVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQ 780

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
             KA  +  +M++  V PNV+++ T+I G  R    ++   L  +M EK ++ D ++ ++
Sbjct: 781 FLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNL 840

Query: 372 VV 373
           +V
Sbjct: 841 LV 842



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 172/362 (47%), Gaps = 3/362 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + VT   ++    +E   ++A  +F ++      PD + ++  +   C   D   A  L 
Sbjct: 238 DNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLL 297

Query: 75  FEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            EM  + GV  S  T+  ++    K G M+EA R++D MV   +  +    ++L++G+C 
Sbjct: 298 REMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCK 357

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++ +A +LF  ME  G   D V +++++  +CKN E+E+A+  Y  M S  I P+ V 
Sbjct: 358 GNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVL 417

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
            +T+  G  +    E AL++F +     +A        F+   CK G +  A    + + 
Sbjct: 418 VHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFL-LFCKQGKVDAATSFLKMME 476

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E ++  YN ++   C+   +++A  +F  +  + L  +  TY+I+I G   +    
Sbjct: 477 QKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQ 536

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM-KEKKVMPDASIVSMV 372
            A D+   M  +    N +I+ T+I+G  ++ + SK  E+L  + KEK+     +  + +
Sbjct: 537 NAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSI 596

Query: 373 VD 374
           +D
Sbjct: 597 ID 598



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 147/301 (48%), Gaps = 8/301 (2%)

Query: 56  SLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
           +LI  +   N  + +KR  FE+  +        FN +++   +N +MD A     LMV R
Sbjct: 146 TLIPNVMVNNLVDSSKRFGFELTPRA-------FNYLLNAYIRNKRMDYAVDCFGLMVDR 198

Query: 116 DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
            V P     + ++     +  I+ A+E++  M  +G   D+V+  +L+    + ++ EEA
Sbjct: 199 KVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEA 258

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ-RDDVAADTSTYNTFID 234
           + ++R ++S+G +P  + ++       +   +  AL L  EM+ +  V A   TY + I 
Sbjct: 259 VKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIV 318

Query: 235 GLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA 294
              K G + EAV +   +      + + A   L++G CK   L  AL+LF  +    L  
Sbjct: 319 AFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAP 378

Query: 295 DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
           D V +++M+   C + +M+KA + ++ M+   +AP+ ++  T+I G ++   P   +E+ 
Sbjct: 379 DKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIF 438

Query: 355 H 355
           +
Sbjct: 439 N 439



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 162/358 (45%), Gaps = 2/358 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
            +N +++   +   +D A   F  M    + P V   N+++  L  +N  +EAK ++ +M
Sbjct: 171 AFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM 230

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +  GV    VT  ++M    +  K +EA ++   ++ R   P+   +S  +   C T  +
Sbjct: 231 VLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDL 290

Query: 138 NRAEELFGSME-SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
             A +L   M   +G      +Y  +I  + K   +EEA+ +  EMV  GI  +V+   +
Sbjct: 291 VMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATS 350

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  G  + +++  AL LF  M+ + +A D   ++  ++  CKN  + +A+E +  +  ++
Sbjct: 351 LVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVR 410

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
                   + +I G  K+   E ALE+F        +A     N +    C  G++D A 
Sbjct: 411 IAPSSVLVHTMIQGCLKAESPEAALEIFND-SFESWIAHGFMCNKIFLLFCKQGKVDAAT 469

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
                ME+  + PNV+ +  ++    R+        +  +M EK + P+    S+++D
Sbjct: 470 SFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILID 527



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 58/116 (50%)

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
           EL  +A+N L++   ++ R++ A++ F  +  R +V  V   N ++  L     +D+A +
Sbjct: 166 ELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKE 225

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           ++  M    VA + +    L+   +R  KP + +++  ++  +   PD  + S+ V
Sbjct: 226 IYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAV 281


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 184/360 (51%), Gaps = 3/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    +N ++  L + G +  A+ +F +M+   +   VV++N++I G+C A D + A+ L
Sbjct: 114 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETL 173

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M + GV P V T+  ++  LC+ G++++A  + + M  R ++PNA  ++ L+D  C 
Sbjct: 174 HRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCK 233

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G      EL   M   G + D V+YN ++NG C+ ++++ A  +  EM S G++P  VT
Sbjct: 234 KGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVT 293

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G  +  +++ A+++ + M  + V  D  TY   I GL K G   +A  +   + 
Sbjct: 294 YTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMM 353

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E D   Y  +ID  C+ G ++  L L + +  +     VVTYN++++G C  GQM 
Sbjct: 354 EAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMK 413

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L   M    V+P+ I +  L+ G  +  K + + EL      K  +PD  + + +V
Sbjct: 414 NADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL---KSAKGTVPDLGVYTSIV 470



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 170/341 (49%)

Query: 34  KAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIM 93
           +A A +LQ+    + P+   +N L+  L    +   A+ +F EM  +GV+ +VV+FN ++
Sbjct: 99  EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158

Query: 94  DELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCK 153
             +C+ G +D A  L   M +  V P+ +TY  L+ G C  G+I  A  +F  M   G K
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            + V + ILI+ +CK  + E  L L+REM  +G++P  VTYN +  GL     ++ A  +
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 278

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
             EM+   +  DT TY T IDG CK   +  A+E+ + +      LD   Y  LI GL K
Sbjct: 279 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 338

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           +GR   A  +   +    L  D  TY ++I   C  G +     L  +M+     P V+ 
Sbjct: 339 AGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVT 398

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +  +++GF ++ +      LL+ M    V PD    ++++D
Sbjct: 399 YNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLD 439



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 139/261 (53%), Gaps = 3/261 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V +  +ID  CK+G  +    L  +M+   + PD VTYN++++GLC A D   A  
Sbjct: 218 KPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASG 277

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM   G++P  VT+  ++D  CK  ++D A  +   MV   V  +  TY+ L+ G  
Sbjct: 278 IVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLS 337

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+   AE + G M   G + D+ +Y ++I+ +C+  +V+  L L +EM +KG KP VV
Sbjct: 338 KAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVV 397

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN +  G  ++ Q+++A  L   M    V+ D  TYN  +DG CK+G + +  EL    
Sbjct: 398 TYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSAK 457

Query: 253 GILKCELDIQAYNCLIDGLCK 273
           G +    D+  Y  ++  + K
Sbjct: 458 GTVP---DLGVYTSIVGEIVK 475


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 182/360 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           ++ +YN ++ GLC  G +D+A      M+   + PDVVTYN+L  G       + A+++ 
Sbjct: 305 DSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVV 364

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M+ QG+ P +VT+  ++   C+ G ++EA +L    + R  + N   Y+ L+   C  
Sbjct: 365 QKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKV 424

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+I  A  LF  ME++  + D + Y+ILI+G CK   V+ A  LY +M  K   P     
Sbjct: 425 GRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQ 484

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             + LGLF+   +  A   F+   R D+  D   YN  IDG  +   I EA++L+  +  
Sbjct: 485 RAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIE 544

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                 +  +N LI+G C+ G L  A ++   +  + LV  VVTY  +++  C  G M +
Sbjct: 545 RGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQE 604

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
                 +ME NAV P  + +  LI G  R NK  + ++LL  M  K ++PD+   + ++ 
Sbjct: 605 MFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQ 664



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 189/360 (52%), Gaps = 2/360 (0%)

Query: 7   EIGVVCKPNT-VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           EI V   P +  T + +I GLC++  ++ A + FL    + + P +V+ N+++   C   
Sbjct: 227 EIKVSGAPQSECTTSILIHGLCEQSKLEDAIS-FLHDSNKVVGPSIVSINTIMSKFCKVG 285

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             + A+  F  M+  G+     ++N+++  LC  G MDEA    D M +  V P+  TY+
Sbjct: 286 LIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYN 345

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL  GF L G ++ A ++   M   G   D V+Y  LI G+C+   +EEAL L +E +S+
Sbjct: 346 TLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSR 405

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G K  V+ YN L   L ++ ++E AL LF+EM+   +  D   Y+  I GLCK G++  A
Sbjct: 406 GFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRA 465

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            +L+  + + +      A   ++ GL K+G +  A   F +  R  L+ DVV YNIMI G
Sbjct: 466 YQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDG 525

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
                 + +A  L+  M E  + P+V+ F TLI+GF R     +  ++L  ++ K ++P 
Sbjct: 526 YVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPS 585



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 179/377 (47%), Gaps = 35/377 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINP----------------------- 49
           +P+ + Y+ +I GLCKEGFV +A  L+ QM+ +   P                       
Sbjct: 443 EPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARN 502

Query: 50  ------------DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
                       DVV YN +I G    +   EA +L+++M+++G+ PSVVTFN +++  C
Sbjct: 503 YFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFC 562

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           + G + EA ++L+++  + + P+  TY+TLM+ +C  G +         ME+       V
Sbjct: 563 RRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHV 622

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y +LI G C+  ++ E+L L   M +KG+ P  VTYNT+     +  ++  AL+L+  M
Sbjct: 623 TYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMM 682

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
              +      TY   I+ LC  G + +   +  ++      L    Y  +I   C  G++
Sbjct: 683 LLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQV 742

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             AL  F  +  +  V  +  Y+ +I+ LC  G + +A   F+ M    V P+  I  T+
Sbjct: 743 SKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTV 802

Query: 338 IHGFVRINKPSKVIELL 354
           ++ F +    S V E L
Sbjct: 803 LNAFHQQGNNSSVFEFL 819



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 195/418 (46%), Gaps = 51/418 (12%)

Query: 3   NGNGEIGVVCK----------PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVV 52
            G G   ++C            N + ++ +     +   +  A  +  +MK  N    V 
Sbjct: 147 QGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVP 206

Query: 53  TYNSLIHGLCHAND-WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL 111
           TYNSL+H + H +  W+    ++ E+   G   S  T ++++  LC+  K+++A   L  
Sbjct: 207 TYNSLLHNMRHTDIMWD----VYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLH- 261

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
              + V P+  + +T+M  FC  G I+ A   F  M   G  HD  SYNIL++G C    
Sbjct: 262 DSNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGS 321

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           ++EAL    +M   G++P VVTYNTL  G   +  +  A K+ ++M    +  D  TY T
Sbjct: 322 MDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTT 381

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            I G C+ G I EA++L +       +L++  YN L+  LCK GR+E AL LF  +    
Sbjct: 382 LICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLR 441

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP---------------------- 329
           L  D + Y+I+IHGLC +G + +A+ L+  M      P                      
Sbjct: 442 LEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEAR 501

Query: 330 -------------NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
                        +V+++  +I G+VR++  ++ ++L +KM E+ + P     + +++
Sbjct: 502 NYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLIN 559



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 169/364 (46%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N + YN ++  LCK G +++A  LF +M+   + PD + Y+ LIHGLC       A +
Sbjct: 408 KLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQ 467

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L+ +M  +   P       ++  L KNG + EA    D   + D+  +   Y+ ++DG+ 
Sbjct: 468 LYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYV 527

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               I  A +L+  M   G     V++N LING+C+  ++ EA  +   +  KG+ P+VV
Sbjct: 528 RLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVV 587

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL     E+  ++       EM+ + V     TY   I GLC+   + E+++L   +
Sbjct: 588 TYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYM 647

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D   YN +I   CK   +  AL+L+  +         VTY ++I+ LC  G +
Sbjct: 648 YAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDL 707

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
                + + +E+  +      ++T+I       + SK +   ++M  K  +      S V
Sbjct: 708 KDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAV 767

Query: 373 VDLL 376
           ++ L
Sbjct: 768 INRL 771



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 59/124 (47%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  VTY  +I+ LC  G +     + + ++  NI     TY ++I   C     ++A 
Sbjct: 687 CDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKAL 746

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             F +M+ +G   S+  ++ +++ LCK G + EA     +M+   V P+     T+++ F
Sbjct: 747 GYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAF 806

Query: 132 CLTG 135
              G
Sbjct: 807 HQQG 810


>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13630
          Length = 826

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 194/360 (53%), Gaps = 1/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V++N+I+ G CK GFVD AK+ F  +    + P V ++N LI+GLC      EA  L
Sbjct: 262 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 321

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   GV+P  VT+N++       G +  A  ++  M+ + + P+  TY+ L+ G C 
Sbjct: 322 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 381

Query: 134 TGKINRAEELFGSMESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            G I+    L   M S G + + +   +++++G CK   ++EALSL+ +M + G+ P +V
Sbjct: 382 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 441

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ +  GL ++ + + AL L++EM    +  ++ T+   + GLC+ G ++EA  L  +L
Sbjct: 442 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 501

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 LDI  YN +IDG  KSG +E ALELF+ +    +   V T+N +I+G C    +
Sbjct: 502 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 561

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  +   ++   +AP+V+ + TL+  +        + EL  +MK + + P     S++
Sbjct: 562 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 621



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 166/350 (47%), Gaps = 12/350 (3%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           + ++ GLCK G +D+A +LF QMK + ++PD+V Y+ +IHGLC    ++ A  L+ EM D
Sbjct: 409 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 468

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
           + + P+  T   ++  LC+ G + EA  LLD ++      +   Y+ ++DG+  +G I  
Sbjct: 469 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 528

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A ELF  +   G      ++N LI GYCK + + EA  +   +   G+ P+VV+Y TL  
Sbjct: 529 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 588

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
                   +   +L  EM+ + +     TY+    GLC+         + R     KC+ 
Sbjct: 589 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 648

Query: 260 DIQ------------AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            ++             YN +I  LC+   L  A      +  R L A   TYNI+I  LC
Sbjct: 649 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 708

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
             G + KA      ++E  V+ +   + TLI        P   ++L H++
Sbjct: 709 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQL 758



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 177/399 (44%), Gaps = 57/399 (14%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINP------------------------ 49
           P+ V Y+ +I GLCK G  D A  L+ +M  + I P                        
Sbjct: 438 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 497

Query: 50  -----------DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                      D+V YN +I G   +    EA  LF  +++ G+ PSV TFN ++   CK
Sbjct: 498 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 557

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
              + EA ++LD++    + P+  +Y+TLMD +   G     +EL   M++ G    +V+
Sbjct: 558 TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVT 617

Query: 159 YNILINGYCKNKEVEEALSLYRE------------MVSKGIKPTVVTYNTLFLGLFEIHQ 206
           Y+++  G C+  + E    + RE            M S+GI P  +TYNT+   L  +  
Sbjct: 618 YSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKH 677

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           +  A    E M+  ++ A ++TYN  ID LC  GYI +A     +L      L   AY  
Sbjct: 678 LSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTT 737

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           LI   C  G  E+A++LF  L  R     +  Y+ +I+ LC    ++++   F  M    
Sbjct: 738 LIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQG 797

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           ++P++ I   +I          K  ELL    +  ++PD
Sbjct: 798 ISPDLDICEVMI----------KSDELLSWTIKWGLLPD 826



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 183/407 (44%), Gaps = 64/407 (15%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIH----------------------------GLCH 63
           VD +  +  +MK +N+N    +YNS+++                            GLC 
Sbjct: 182 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCR 241

Query: 64  ANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
                +A         + + PSVV+FN IM   CK G +D A      +++  + P+ ++
Sbjct: 242 QQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYS 301

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           ++ L++G CL G I  A EL   M   G + D V+YNIL  G+     +  A  + R+M+
Sbjct: 302 HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDML 361

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCKNGYI 242
            KG+ P V+TY  L  G  ++  ++  L L ++M  R          +  + GLCK G I
Sbjct: 362 DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRI 421

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF------RSLP-------- 288
            EA+ LF  +       D+ AY+ +I GLCK G+ ++AL L+      R LP        
Sbjct: 422 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 481

Query: 289 -------------RRVL--------VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
                        R +L          D+V YNI+I G    G +++A +LF  + E  +
Sbjct: 482 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 541

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            P+V  F +LI+G+ +    ++  ++L  +K   + P     + ++D
Sbjct: 542 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 588



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 174/377 (46%), Gaps = 13/377 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P++VTYN +  G    G +  A  +   M  + ++PDV+TY  L+ G C   + +    
Sbjct: 331 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLV 390

Query: 73  LFFEMMDQGVQ-PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           L  +M+ +G +  S++  +V++  LCK G++DEA  L + M    + P+   YS ++ G 
Sbjct: 391 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 450

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK + A  L+  M       +  ++  L+ G C+   + EA SL   ++S G    +
Sbjct: 451 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDI 510

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YN +  G  +   +E AL+LF+ +    +    +T+N+ I G CK   I EA ++   
Sbjct: 511 VLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDV 570

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +      + +Y  L+D     G  +   EL R +    +    VTY+++  GLC   +
Sbjct: 571 IKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK 630

Query: 312 ------------MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
                        +K      DME   + P+ I + T+I    R+   S     L  MK 
Sbjct: 631 HENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKS 690

Query: 360 KKVMPDASIVSMVVDLL 376
           + +   ++  ++++D L
Sbjct: 691 RNLDASSATYNILIDSL 707


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 203/425 (47%), Gaps = 62/425 (14%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V YNTI+   C+EG  D ++ L  +M+ E + PD+VT+NS I  LC      +A R+
Sbjct: 215 PNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRI 274

Query: 74  FFEM-MDQGV---QPSVVTFNVIMDELCK------------------------------- 98
           F +M +D+ +   +P+ +T+N+++   CK                               
Sbjct: 275 FSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQ 334

Query: 99  ----NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
               +GK  EA  +L  M+ + + P+ ++Y+ LMDG C  G ++ A+ + G M+  G   
Sbjct: 335 GLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSP 394

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D V+Y  L++GYC   +V+ A SL +EM+     P   T N L   L+ + ++  A +L 
Sbjct: 395 DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELL 454

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR--------TLGIL----------- 255
            +M       DT T N  +DGLC +G + +A+E+ +         LG L           
Sbjct: 455 RKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDS 514

Query: 256 ----KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                C  D+  Y+ L++GLCK+GR   A  LF  +    L  D + YNI IH  C  G+
Sbjct: 515 LIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGK 574

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +  A  +  DME+     ++  + +LI G    N+  ++  L+ +M+EK + P+    + 
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNT 634

Query: 372 VVDLL 376
            +  L
Sbjct: 635 AIQYL 639



 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 195/386 (50%), Gaps = 35/386 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN  T+  ++ G CK G  DK   L   M+   + P+ V YN+++   C     ++++
Sbjct: 178 CKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSE 237

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV----RPNAFTYSTL 127
           +L  +M ++G+ P +VTFN  +  LCK GK+ +ASR+   M   +     RPN+ TY+ +
Sbjct: 238 KLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLM 297

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDV----SYNILINGYCKNKEVEEALSLYREMV 183
           + GFC  G +  A+ LF S+     ++DD+    SYNI + G  ++ +  EA ++ ++M+
Sbjct: 298 LKGFCKVGLLEDAKTLFESIR----ENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMI 353

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
            KGI P++ +YN L  GL ++  +  A  +   M+R+ V+ D  TY   + G C  G + 
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVD 413

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
            A  L + +    C  +    N L+  L   GR+  A EL R +  +    D VT NI++
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473

Query: 304 HGLCNDGQMDKAHDLFLDME-----------------------ENAVAPNVIIFVTLIHG 340
            GLC  G++DKA ++   M                        EN   P++I + TL++G
Sbjct: 474 DGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNG 533

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDA 366
             +  + ++   L  +M  +K+ PD+
Sbjct: 534 LCKAGRFAEAKTLFAEMMGEKLQPDS 559



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 187/376 (49%), Gaps = 23/376 (6%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN++TYN ++ G CK G ++ AK LF  ++  +    + +YN  + GL     + EA+ 
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAET 347

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M+D+G+ PS+ ++N++MD LCK G + +A  ++ LM +  V P+A TY  L+ G+C
Sbjct: 348 VLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYC 407

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK++ A+ L   M    C  +  + NIL++       + EA  L R+M  KG     V
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTV 467

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAA-----------------------DTSTY 229
           T N +  GL    +++ A+++ + M+    AA                       D  TY
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           +T ++GLCK G   EA  LF  +   K + D  AYN  I   CK G++  A  + + + +
Sbjct: 528 STLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEK 587

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
           +     + TYN +I GL    Q+ + H L  +M E  ++PN+  + T I       K   
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVED 647

Query: 350 VIELLHKMKEKKVMPD 365
              LL +M +K + P+
Sbjct: 648 ATNLLDEMMQKNIAPN 663



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 188/368 (51%), Gaps = 4/368 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP    YN +++   +E  V+    L+  M    I+P+  T+N LI  LC ++  + A+ 
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARE 168

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM ++G +P+  TF +++   CK G  D+   LL+ M    V PN   Y+T++  FC
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFC 228

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK---GI-K 188
             G+ + +E+L   M   G   D V++N  I+  CK  +V +A  ++ +M      G+ +
Sbjct: 229 REGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  +TYN +  G  ++  +E A  LFE ++ +D      +YN ++ GL ++G  +EA  +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETV 348

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            + +        I +YN L+DGLCK G L  A  +   + R  +  D VTY  ++HG C+
Sbjct: 349 LKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCS 408

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G++D A  L  +M  N   PN      L+H    + + S+  ELL KM EK    D   
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVT 468

Query: 369 VSMVVDLL 376
            +++VD L
Sbjct: 469 CNIIVDGL 476



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 187/386 (48%), Gaps = 24/386 (6%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTY  ++ G C  G VD AK+L  +M   N  P+  T N L+H L +    +EA+ L
Sbjct: 394 PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEEL 453

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL-----------------------D 110
             +M ++G     VT N+I+D LC +G++D+A  ++                       D
Sbjct: 454 LRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDD 513

Query: 111 LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 170
            +++ +  P+  TYSTL++G C  G+   A+ LF  M     + D ++YNI I+ +CK  
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQG 573

Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
           ++  A  + ++M  KG   ++ TYN+L LGL   +Q+     L +EM+   ++ +  TYN
Sbjct: 574 KISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYN 633

Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           T I  LC+ G + +A  L   +       ++ ++  LI   CK    ++A E+F +    
Sbjct: 634 TAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFET-AVS 692

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
           +       Y++M + L   GQ+ KA +L   + +        ++  L+    + ++    
Sbjct: 693 ICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVA 752

Query: 351 IELLHKMKEKKVMPDASIVSMVVDLL 376
             +LHKM +K    D + +  V+D L
Sbjct: 753 SGILHKMIDKGYGFDPAALMPVIDGL 778



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 133/285 (46%), Gaps = 44/285 (15%)

Query: 4   GNGEIGVV--------CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYN 55
           GN  IG+V        C P+ +TY+T+++GLCK G   +AK LF +M GE + PD + YN
Sbjct: 504 GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYN 563

Query: 56  SLIHGLCHANDWNEAKR-----------------------------------LFFEMMDQ 80
             IH  C     + A R                                   L  EM ++
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREK 623

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           G+ P++ T+N  +  LC+ GK+++A+ LLD M+Q+++ PN F++  L+  FC     + A
Sbjct: 624 GISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMA 683

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
           +E+F +  S+ C   +  Y+++ N      ++ +A  L   ++ +G +     Y  L + 
Sbjct: 684 QEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVS 742

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           L +  ++E A  +  +M       D +     IDGL K G   EA
Sbjct: 743 LCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEA 787


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 182/360 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           ++ +YN ++ GLC  G +D+A      M+   + PDVVTYN+L  G       + A+++ 
Sbjct: 305 DSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVV 364

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            +M+ QG+ P +VT+  ++   C+ G ++EA +L    + R  + N   Y+ L+   C  
Sbjct: 365 QKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKV 424

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G+I  A  LF  ME++  + D + Y+ILI+G CK   V+ A  LY +M  K   P     
Sbjct: 425 GRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQ 484

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
             + LGLF+   +  A   F+   R D+  D   YN  IDG  +   I EA++L+  +  
Sbjct: 485 RAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIE 544

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                 +  +N LI+G C+ G L  A ++   +  + LV  VVTY  +++  C  G M +
Sbjct: 545 RGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQE 604

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
                 +ME NAV P  + +  LI G  R NK  + ++LL  M  K ++PD+   + ++ 
Sbjct: 605 MFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQ 664



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 189/360 (52%), Gaps = 2/360 (0%)

Query: 7   EIGVVCKPNT-VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           EI V   P +  T + +I GLC++  ++ A + FL    + + P +V+ N+++   C   
Sbjct: 227 EIKVSGAPQSECTTSILIHGLCEQSKLEDAIS-FLHDSNKVVGPSIVSINTIMSKFCKVG 285

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
             + A+  F  M+  G+     ++N+++  LC  G MDEA    D M +  V P+  TY+
Sbjct: 286 LIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYN 345

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TL  GF L G ++ A ++   M   G   D V+Y  LI G+C+   +EEAL L +E +S+
Sbjct: 346 TLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSR 405

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G K  V+ YN L   L ++ ++E AL LF+EM+   +  D   Y+  I GLCK G++  A
Sbjct: 406 GFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRA 465

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            +L+  + + +      A   ++ GL K+G +  A   F +  R  L+ DVV YNIMI G
Sbjct: 466 YQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDG 525

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
                 + +A  L+  M E  + P+V+ F TLI+GF R     +  ++L  ++ K ++P 
Sbjct: 526 YVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPS 585



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 179/377 (47%), Gaps = 35/377 (9%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINP----------------------- 49
           +P+ + Y+ +I GLCKEGFV +A  L+ QM+ +   P                       
Sbjct: 443 EPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARN 502

Query: 50  ------------DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
                       DVV YN +I G    +   EA +L+++M+++G+ PSVVTFN +++  C
Sbjct: 503 YFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFC 562

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           + G + EA ++L+++  + + P+  TY+TLM+ +C  G +         ME+       V
Sbjct: 563 RRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHV 622

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           +Y +LI G C+  ++ E+L L   M +KG+ P  VTYNT+     +  ++  AL+L+  M
Sbjct: 623 TYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMM 682

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
              +      TY   I+ LC  G + +   +  ++      L    Y  +I   C  G++
Sbjct: 683 LLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQV 742

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             AL  F  +  +  V  +  Y+ +I+ LC  G + +A   F+ M    V P+  I  T+
Sbjct: 743 SKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTV 802

Query: 338 IHGFVRINKPSKVIELL 354
           ++ F +    S V E L
Sbjct: 803 LNAFHQQGNNSSVFEFL 819



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 195/418 (46%), Gaps = 51/418 (12%)

Query: 3   NGNGEIGVVCK----------PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVV 52
            G G   ++C            N + ++ +     +   +  A  +  +MK  N    V 
Sbjct: 147 QGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVP 206

Query: 53  TYNSLIHGLCHAND-WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL 111
           TYNSL+H + H +  W+    ++ E+   G   S  T ++++  LC+  K+++A   L  
Sbjct: 207 TYNSLLHNMRHTDIMWD----VYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLH- 261

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
              + V P+  + +T+M  FC  G I+ A   F  M   G  HD  SYNIL++G C    
Sbjct: 262 DSNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGS 321

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           ++EAL    +M   G++P VVTYNTL  G   +  +  A K+ ++M    +  D  TY T
Sbjct: 322 MDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTT 381

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
            I G C+ G I EA++L +       +L++  YN L+  LCK GR+E AL LF  +    
Sbjct: 382 LICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLR 441

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP---------------------- 329
           L  D + Y+I+IHGLC +G + +A+ L+  M      P                      
Sbjct: 442 LEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEAR 501

Query: 330 -------------NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
                        +V+++  +I G+VR++  ++ ++L +KM E+ + P     + +++
Sbjct: 502 NYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLIN 559



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 170/364 (46%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N + YN ++  LCK G +++A  LF +M+   + PD + Y+ LIHGLC       A +
Sbjct: 408 KLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQ 467

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L+ +M  +   P       ++  L KNG + EA    D   + D+  +   Y+ ++DG+ 
Sbjct: 468 LYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYV 527

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               I  A +L+  M   G     V++N LING+C+  ++ EA  +   +  KG+ P+VV
Sbjct: 528 RLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVV 587

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL     E+  ++       EM+ + V     TY   I GLC+   + E+++L   +
Sbjct: 588 TYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYM 647

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  D   YN +I   CK   +  AL+L+  +         VTY ++I+ LC  G +
Sbjct: 648 YAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDL 707

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
                + + +E+  +    + ++T+I       + SK +   ++M  K  +      S V
Sbjct: 708 KDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAV 767

Query: 373 VDLL 376
           ++ L
Sbjct: 768 INRL 771



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 60/124 (48%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  VTY  +I+ LC  G +     + + ++  NI    VTY ++I   C     ++A 
Sbjct: 687 CDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKAL 746

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             F +M+ +G   S+  ++ +++ LCK G + EA     +M+   V P+     T+++ F
Sbjct: 747 GYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAF 806

Query: 132 CLTG 135
              G
Sbjct: 807 HQQG 810


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/330 (33%), Positives = 180/330 (54%), Gaps = 2/330 (0%)

Query: 48  NPDVVTYNSLIHGLCHANDWNEAKRLFFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEAS 106
            PDV T+N LI G C A +  EA  +  EM  D GV PS+ T N+++  LCK+GK+  A 
Sbjct: 151 RPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAM 210

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
              +  V+R +  +A T+S L++G    G + +A  L     + GC  D  +Y  ++N  
Sbjct: 211 DHFE-AVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWL 269

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
            KNK+++EA++L  ++ + G  PT+ TYN L  GL ++ ++E A+ L  ++  +    D 
Sbjct: 270 AKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDV 329

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            TY + IDGL K     EA +LF+ +      LD   Y  LI GL ++G++  A  ++++
Sbjct: 330 VTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKT 389

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +     V DVVT + MI GL   G++  A  +F  ME   +APN +++  LIHG  +  K
Sbjct: 390 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 449

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
               +E+L +MK+    PD    ++++D L
Sbjct: 450 MDCALEMLAQMKKAFCTPDTITYNILIDGL 479



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 189/366 (51%), Gaps = 11/366 (3%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C  +  TY  I++ L K   + +A AL  ++      P + TYN+L++GLC      EA 
Sbjct: 255 CTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 314

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  +++D G  P VVT+  ++D L K  +  EA +L   M  R +  +   Y+ L+ G 
Sbjct: 315 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGL 374

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
             TGKI +A  ++ +M S GC  D V+ + +I+G  K   +  A+ +++ M ++G+ P  
Sbjct: 375 LQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNE 434

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V Y+ L  GL +  +++ AL++  +M++     DT TYN  IDGLCK+G +  A   F  
Sbjct: 435 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 494

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C+ D+  YN LI GLCK+G  + A  +   +     V     Y+ ++ GLC  G+
Sbjct: 495 MLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFV-----YSSLVDGLCKSGK 549

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA----S 367
           ++    LF +ME + VA N      LI    + N+  + + L + ++ K+ MP      S
Sbjct: 550 LEGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIR-KEGMPHPYAYNS 607

Query: 368 IVSMVV 373
           I+S ++
Sbjct: 608 IISALI 613



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 187/371 (50%), Gaps = 2/371 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHAN 65
           E+  + +P+  T+N +I G C     ++A A+  +M+ +  + P + T+N ++HGLC + 
Sbjct: 145 ELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSG 204

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
               A    FE + + +  S  TF+++++ L K G M +A  L           +  TY+
Sbjct: 205 KVLAAMD-HFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYT 263

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            +++      KI  A  L   + + GC     +YN L+NG CK   +EEA+ L R++V  
Sbjct: 264 AIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN 323

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G  P VVTY +L  GL +  +   A KLF+EM    +A DT  Y   I GL + G I +A
Sbjct: 324 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQA 383

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             +++T+    C  D+   + +IDGL K+GR+  A+ +F+S+  R L  + V Y+ +IHG
Sbjct: 384 SSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 443

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           LC   +MD A ++   M++    P+ I +  LI G  +            +M E    PD
Sbjct: 444 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD 503

Query: 366 ASIVSMVVDLL 376
               ++++  L
Sbjct: 504 VYTYNILISGL 514



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 180/361 (49%), Gaps = 5/361 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +  T++ +I+GL K G + +A +L  +        D+ TY ++++ L       EA  L 
Sbjct: 223 SAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALM 282

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            ++   G  P++ T+N +++ LCK G+++EA  LL  +V     P+  TY++L+DG    
Sbjct: 283 EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKE 342

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            +   A +LF  M S G   D V Y  LI G  +  ++ +A S+Y+ M S G  P VVT 
Sbjct: 343 KRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTL 402

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           +T+  GL +  ++  A+++F+ M+   +A +   Y+  I GLCK   +  A+E+   +  
Sbjct: 403 STMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 462

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C  D   YN LIDGLCKSG +E A   F  +       DV TYNI+I GLC  G  D 
Sbjct: 463 AFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDA 522

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           A  +  DM  +       ++ +L+ G  +  K      L H+M+   V    +   ++  
Sbjct: 523 ACGVLDDMSSSR-----FVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFH 577

Query: 375 L 375
           L
Sbjct: 578 L 578



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 170/356 (47%), Gaps = 39/356 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ VTY ++IDGL KE    +A  LF +M    +  D V Y +LI GL       +A 
Sbjct: 325 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQAS 384

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            ++  M   G  P VVT + ++D L K G++  A R+   M  R + PN   YS L+ G 
Sbjct: 385 SVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 444

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   K++ A E+   M+   C  D ++YNILI+G CK+ +VE A + + EM+  G KP V
Sbjct: 445 CKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDV 504

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN L  GL +    + A  +      DD+++    Y++ +DGLCK+G +     LF  
Sbjct: 505 YTYNILISGLCKAGNTDAACGVL-----DDMSSSRFVYSSLVDGLCKSGKLEGGCMLFHE 559

Query: 252 L---GILKCELDIQ------------------------------AYNCLIDGLCKSGRLE 278
           +   G+   +   +                              AYN +I  L KSG++ 
Sbjct: 560 MERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVN 619

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
               +++ + R     D VTYN +++G+    +MD+AH  +L+M      P V I 
Sbjct: 620 EGQAVYQEMTR-WWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPVSIL 674



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 37/263 (14%)

Query: 140 AEELFGSMES--MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           A ELF  + S   G +H   + N L++ + + K   EA +L +  ++   +P V T+N L
Sbjct: 101 AWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVL 160

Query: 198 FLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---- 252
             G     + E A  +  EM+ D  VA    T+N  + GLCK+G ++ A++ F  +    
Sbjct: 161 ITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSM 220

Query: 253 ------------GILK------------------CELDIQAYNCLIDGLCKSGRLEIALE 282
                       G++K                  C +DI  Y  +++ L K+ +++ A+ 
Sbjct: 221 PVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVA 280

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           L   +        + TYN +++GLC  G++++A DL   + +N   P+V+ + +LI G  
Sbjct: 281 LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 340

Query: 343 RINKPSKVIELLHKMKEKKVMPD 365
           +  +  +  +L  +M  + +  D
Sbjct: 341 KEKRSFEAYKLFKEMASRGLALD 363



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 1/86 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   YN+II  L K G V++ +A++ +M      PD VTYN+L++G+  AN  + A   
Sbjct: 600 PHPYAYNSIISALIKSGKVNEGQAVYQEMT-RWWKPDRVTYNALLNGMIGANRMDRAHYY 658

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKN 99
           + EM  +G  P V   + + D+  K+
Sbjct: 659 YLEMTGRGYVPPVSILHKLADDRLKD 684


>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 798

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 194/360 (53%), Gaps = 1/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V++N+I+ G CK GFVD AK+ F  +    + P V ++N LI+GLC      EA  L
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   GV+P  VT+N++       G +  A  ++  M+ + + P+  TY+ L+ G C 
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339

Query: 134 TGKINRAEELFGSMESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            G I+    L   M S G + + +   +++++G CK   ++EALSL+ +M + G+ P +V
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ +  GL ++ + + AL L++EM    +  ++ T+   + GLC+ G ++EA  L  +L
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 LDI  YN +IDG  KSG +E ALELF+ +    +   V T+N +I+G C    +
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A  +   ++   +AP+V+ + TL+  +        + EL  +MK + + P     S++
Sbjct: 520 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 579



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 166/350 (47%), Gaps = 12/350 (3%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           + ++ GLCK G +D+A +LF QMK + ++PD+V Y+ +IHGLC    ++ A  L+ EM D
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
           + + P+  T   ++  LC+ G + EA  LLD ++      +   Y+ ++DG+  +G I  
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A ELF  +   G      ++N LI GYCK + + EA  +   +   G+ P+VV+Y TL  
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
                   +   +L  EM+ + +     TY+    GLC+         + R     KC+ 
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606

Query: 260 DIQ------------AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            ++             YN +I  LC+   L  A      +  R L A   TYNI+I  LC
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
             G + KA      ++E  V+ +   + TLI        P   ++L H++
Sbjct: 667 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQL 716



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 155/312 (49%), Gaps = 12/312 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN+ T+  ++ GLC++G + +A++L   +       D+V YN +I G   +    EA  L
Sbjct: 431 PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALEL 490

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  +++ G+ PSV TFN ++   CK   + EA ++LD++    + P+  +Y+TLMD +  
Sbjct: 491 FKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYAN 550

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE------------ 181
            G     +EL   M++ G    +V+Y+++  G C+  + E    + RE            
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRD 610

Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
           M S+GI P  +TYNT+   L  +  +  A    E M+  ++ A ++TYN  ID LC  GY
Sbjct: 611 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGY 670

Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
           I +A     +L      L   AY  LI   C  G  E+A++LF  L  R     +  Y+ 
Sbjct: 671 IRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSA 730

Query: 302 MIHGLCNDGQMD 313
           +I+ LC    M+
Sbjct: 731 VINRLCRRHLMN 742



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 183/407 (44%), Gaps = 64/407 (15%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIH----------------------------GLCH 63
           VD +  +  +MK +N+N    +YNS+++                            GLC 
Sbjct: 140 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCR 199

Query: 64  ANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
                +A         + + PSVV+FN IM   CK G +D A      +++  + P+ ++
Sbjct: 200 QQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYS 259

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           ++ L++G CL G I  A EL   M   G + D V+YNIL  G+     +  A  + R+M+
Sbjct: 260 HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDML 319

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCKNGYI 242
            KG+ P V+TY  L  G  ++  ++  L L ++M  R          +  + GLCK G I
Sbjct: 320 DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRI 379

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF------RSLP-------- 288
            EA+ LF  +       D+ AY+ +I GLCK G+ ++AL L+      R LP        
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439

Query: 289 -------------RRVL--------VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
                        R +L          D+V YNI+I G    G +++A +LF  + E  +
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            P+V  F +LI+G+ +    ++  ++L  +K   + P     + ++D
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 174/377 (46%), Gaps = 13/377 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P++VTYN +  G    G +  A  +   M  + ++PDV+TY  L+ G C   + +    
Sbjct: 289 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLV 348

Query: 73  LFFEMMDQGVQ-PSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           L  +M+ +G +  S++  +V++  LCK G++DEA  L + M    + P+   YS ++ G 
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 408

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK + A  L+  M       +  ++  L+ G C+   + EA SL   ++S G    +
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDI 468

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V YN +  G  +   +E AL+LF+ +    +    +T+N+ I G CK   I EA ++   
Sbjct: 469 VLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDV 528

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +      + +Y  L+D     G  +   EL R +    +    VTY+++  GLC   +
Sbjct: 529 IKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK 588

Query: 312 ------------MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
                        +K      DME   + P+ I + T+I    R+   S     L  MK 
Sbjct: 589 HENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKS 648

Query: 360 KKVMPDASIVSMVVDLL 376
           + +   ++  ++++D L
Sbjct: 649 RNLDASSATYNILIDSL 665


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 186/369 (50%), Gaps = 6/369 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+N+++  L + G +     LF  M+  ++ PD+VTY  L++ LC A    +A ++
Sbjct: 129 PDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKV 188

Query: 74  FFEMMDQG--VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR--DVRPNAFTYSTLMD 129
              M   G  V   +V  N ++D LCK G++ +A   +D  +++     PN  TY+ L D
Sbjct: 189 LDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLAD 248

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI-- 187
             C  G I+ A ++   ME  G   + ++ N ++ G C+   V  AL  +RE  +  +  
Sbjct: 249 ACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEA 308

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +   VTY+TL       + V  A++LF EM       D   Y T I GL + G +V+A  
Sbjct: 309 RGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACN 368

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +  ++     +LD +AYN LI G C+  RL  A +LF  +    L  DV TYN ++  LC
Sbjct: 369 IAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLC 428

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G      +L  +M ++   P+V+ F TL+HG+ +  K  + +++   M E ++ P+  
Sbjct: 429 KAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTV 488

Query: 368 IVSMVVDLL 376
           I + ++D L
Sbjct: 489 IYNTLIDFL 497



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 121/374 (32%), Positives = 187/374 (50%), Gaps = 13/374 (3%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN---PDVVTYNSLIHGLCHANDW 67
           VC  + V  NT++DGLCK G +  A  +F+  +   ++   P+ VTYN L    C   D 
Sbjct: 199 VCA-DIVILNTVVDGLCKIGRLQDA-IVFVDERMRQVHGCAPNTVTYNCLADACCRVGDI 256

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR-----DVRPNAF 122
           + A ++   M  +GV P+V+T N I+  LC+ G++  A   LD   ++     + R NA 
Sbjct: 257 DMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAA---LDFFREKRTTWLEARGNAV 313

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           TYSTL+  F     +  A ELF  M   G   D V Y  +I+G  +   + +A ++   M
Sbjct: 314 TYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASM 373

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
              G K     YN L  G     ++  A +LFEEM+   +  D  TYNT +  LCK G  
Sbjct: 374 KKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDF 433

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
               EL   +    C+  +  +  L+ G CK+G+ + AL++FRS+    +  + V YN +
Sbjct: 434 SAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTL 493

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I  LC   ++D A  LF +M EN V  NV  +  L+ G    N P K  EL+ +MKE++ 
Sbjct: 494 IDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERC 553

Query: 363 MPDASIVSMVVDLL 376
            PD   + ++++ L
Sbjct: 554 TPDYVTMDVLMEWL 567



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 176/351 (50%), Gaps = 2/351 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PNTVTYN + D  C+ G +D A  +  +M+ E + P+V+T N+++ GLC       A 
Sbjct: 236 CAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAAL 295

Query: 72  RLFFEMMDQGVQP--SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
             F E     ++   + VT++ ++        +  A  L   M  +   P+A  Y T++ 
Sbjct: 296 DFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMIS 355

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G    G++  A  +  SM+  G K D  +YNILI G+C+ K + EA  L+ EM   G++P
Sbjct: 356 GLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQP 415

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            V TYNTL   L +        +L   M  D       T+ T + G CK G   EA+++F
Sbjct: 416 DVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIF 475

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
           R++G  + + +   YN LID LCKS  +++A++LF  +    + A+V TYN ++ GL + 
Sbjct: 476 RSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDK 535

Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
              +KA +L   M+E    P+ +    L+     I +  ++   + +  EK
Sbjct: 536 NMPEKAFELMDQMKEERCTPDYVTMDVLMEWLPEIGETERLKCFMEQRDEK 586



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 5/189 (2%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G   +P+  TYNT++  LCK G       L   M  +   P VVT+ +L+HG C A   +
Sbjct: 410 GAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTD 469

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA ++F  M +  +QP+ V +N ++D LCK+ ++D A +L D M + +V  N  TY+ L+
Sbjct: 470 EALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALL 529

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-- 186
            G        +A EL   M+   C  D V+ ++L+    +  E E       +   KG  
Sbjct: 530 KGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLMEWLPEIGETERLKCFMEQRDEKGGA 589

Query: 187 ---IKPTVV 192
              +KP  V
Sbjct: 590 KLTMKPPFV 598


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 196/387 (50%), Gaps = 35/387 (9%)

Query: 22  IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN------------- 68
           +IDGLCK+G V++AK L L+M G+ I P+VVTYN+L++      D+              
Sbjct: 221 VIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDK 280

Query: 69  ----------------------EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
                                 EA+++F +M+++GV+  +  F  I+   CK G M  A 
Sbjct: 281 VVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAF 340

Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
            L D + +R +  NA TY  L+ G C +G+++ AE L   M+S G   + V +N LINGY
Sbjct: 341 ALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGY 400

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           CK   ++EAL +   M  KG +  + TYNT+  GL ++++ E A +    M    V  + 
Sbjct: 401 CKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNA 460

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            ++   ID  CK G +VEA  +F+ +     + ++  YN LIDG  K G+L+ A  L   
Sbjct: 461 VSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDE 520

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +    + +D+ TY  ++HG C  G++++A  L  ++    +A +++ +  +I G  +  +
Sbjct: 521 MESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGR 580

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVV 373
             +   L  +M    + PD  + + +V
Sbjct: 581 SEEAFRLYDEMMAAGLTPDDRVYTSLV 607



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 83/224 (37%), Positives = 131/224 (58%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N V +NT+I+G CK+G +D+A  +   M+ +    D+ TYN++  GLC  N   EAKR  
Sbjct: 389 NLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWL 448

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
           F M+++GV P+ V+F +++D  CK G + EA R+   M ++  +PN  TY+TL+DG+   
Sbjct: 449 FTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKK 508

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           GK+  A  L   MES+G   D  +Y  L++G C   +VEEAL+L  E+  KG+  ++VTY
Sbjct: 509 GKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTY 568

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
             +  GL +  + E A +L++EM    +  D   Y + +  L K
Sbjct: 569 TAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANLHK 612



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 157/292 (53%), Gaps = 8/292 (2%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           + +II   CK G + +A ALF ++    +  +  TY +LIHG C++   + A+ L  EM 
Sbjct: 323 FTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQ 382

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
            QG+  ++V FN +++  CK G +DEA R+ D+M ++    + FTY+T+  G C   K+N
Sbjct: 383 SQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLC---KLN 439

Query: 139 RAEE----LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           R EE    LF  +E  G   + VS+ I+I+ +CK   + EA  ++++M  KG KP VVTY
Sbjct: 440 RHEEAKRWLFTMVEK-GVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTY 498

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           NTL  G  +  +++ A +L +EM+   + +D  TY T + G C  G + EA+ L   +  
Sbjct: 499 NTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCR 558

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
               + I  Y  +I GL K GR E A  L+  +    L  D   Y  ++  L
Sbjct: 559 KGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANL 610



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/268 (34%), Positives = 141/268 (52%), Gaps = 2/268 (0%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E G+V   N  TY  +I G C  G +D A+ L  +M+ + ++ ++V +N+LI+G C    
Sbjct: 348 ERGLV--ANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGM 405

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            +EA R+   M  +G +  + T+N I   LCK  + +EA R L  MV++ V PNA +++ 
Sbjct: 406 IDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTI 465

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++D  C  G +  AE +F  M+  G K + V+YN LI+GY K  +++EA  L  EM S G
Sbjct: 466 MIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIG 525

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +   + TY TL  G     +VE AL L  E+ R  +A    TY   I GL K G   EA 
Sbjct: 526 MTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAF 585

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKS 274
            L+  +       D + Y  L+  L K+
Sbjct: 586 RLYDEMMAAGLTPDDRVYTSLVANLHKT 613



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 165/337 (48%)

Query: 37  ALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
             F +M    ++  V +   +I GLC       AK L  EM  +G++P+VVT+N +++  
Sbjct: 201 GFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAY 260

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
            K    +  + +L LM    V  NA TY+ L++ +  +GKI  AE++F  M   G + D 
Sbjct: 261 IKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADI 320

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
             +  +I+  CK   ++ A +L+ E+  +G+     TY  L  G     Q++ A  L  E
Sbjct: 321 HVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNE 380

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
           MQ   +  +   +NT I+G CK G I EA+ +   +     E DI  YN +  GLCK  R
Sbjct: 381 MQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNR 440

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
            E A     ++  + +  + V++ IMI   C +G + +A  +F DM++    PNV+ + T
Sbjct: 441 HEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNT 500

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           LI G+ +  K  +   L  +M+   +  D    + +V
Sbjct: 501 LIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLV 537



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 144/309 (46%)

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
           + E  ++F  M+  G++    +  V +  L ++ +M  +      MV+  V    ++ + 
Sbjct: 161 FEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTI 220

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++DG C  G++ RA++L   M   G K + V+YN L+N Y K  + E    + R M    
Sbjct: 221 VIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDK 280

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           +     TY  L        ++  A K+FE+M    V AD   + + I   CK G +  A 
Sbjct: 281 VVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAF 340

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            LF  L       +   Y  LI G C SG+L+ A  L   +  + L  ++V +N +I+G 
Sbjct: 341 ALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGY 400

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C  G +D+A  +   ME+     ++  + T+  G  ++N+  +    L  M EK V P+A
Sbjct: 401 CKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNA 460

Query: 367 SIVSMVVDL 375
              ++++D+
Sbjct: 461 VSFTIMIDI 469



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 91/207 (43%)

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           ++L   Y  N   EE   ++  MV  G+K    +     L L    Q+  +L  F++M  
Sbjct: 149 DMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVE 208

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
             V     +    IDGLCK G +  A +L   +     + ++  YN L++   K    E 
Sbjct: 209 FKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEG 268

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
             E+ R +    +V +  TY ++I    + G++ +A  +F  M E  V  ++ +F ++I 
Sbjct: 269 VNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIIS 328

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDA 366
              ++    +   L  ++ E+ ++ +A
Sbjct: 329 WQCKLGNMKRAFALFDELNERGLVANA 355


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 178/360 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P++  Y + + G C+ G +  A  LF+ M          TY +L+HGLC A    EA  +
Sbjct: 105 PDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSV 164

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M   G  P    +  ++  LC  G+  EA  LL   +     PN   Y+ L+DG+C 
Sbjct: 165 FAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCN 224

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A ++F  M+  GC  +  +Y  LI+G+CK+++++ A+ L+  MV  G+ P VVT
Sbjct: 225 VGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVT 284

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  G     Q++ A +L + M+   +  +  T +  ID LCK+  + EA  L  +L 
Sbjct: 285 YTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLI 344

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               +++   Y  LIDGLCK+GR   A  L ++L  +  V D  TY+ +I GLC   ++ 
Sbjct: 345 QKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELS 404

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  +  DM E  V P+ + +  +I   VR        ++L KM    + PD    ++ V
Sbjct: 405 EAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFV 464



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 184/400 (46%), Gaps = 35/400 (8%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C     TY  ++ GLC  G V +A ++F  M+ +   PD   Y +++HGLC A    EA+
Sbjct: 138 CVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAE 197

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  + M +G +P+VV +N ++D  C  G ++ A  + + M      PN  TY+ L+ GF
Sbjct: 198 TLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGF 257

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C + K++RA  LF  M   G   + V+Y  LI G C + +++ A  L + M + G+ P  
Sbjct: 258 CKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNE 317

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            T + L   L +  +V  A  L   + +  +  +   Y + IDGLCK G    A  L +T
Sbjct: 318 WTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQT 377

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIAL-----------------------ELFRSL- 287
           L       D   Y+ LIDGLC+   L  A+                       EL R + 
Sbjct: 378 LVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVG 437

Query: 288 ---PRRVL--------VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
               +++L          DV TY I +   C++G+M+ A  + L M ++ V PN++ +  
Sbjct: 438 ADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNA 497

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           LI G+  +   S+       M      P+    ++++ LL
Sbjct: 498 LICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLL 537



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 164/355 (46%), Gaps = 4/355 (1%)

Query: 20  NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
           N  +  L +   +   ++   +M   N+     TY +LI+  C A D   +KR    ++ 
Sbjct: 45  NAFLMALARHRMLADMESFASRMPARNLR----TYTTLINAYCLAGDLPASKRHLSSLLR 100

Query: 80  QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
            G  P    +   +   C+ G +  A RL  LM  R     AFTY+ L+ G C  G +  
Sbjct: 101 AGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVRE 160

Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
           A  +F  M++ GC  D   Y  +++G C      EA +L  + +++G +P VV YN L  
Sbjct: 161 AMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALID 220

Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
           G   +  +E A+ +FE M  +  + +  TY   I G CK+  +  A+ LF  +       
Sbjct: 221 GYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVP 280

Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
           ++  Y  LI G C  G+L+ A  L +S+    LV +  T +++I  LC   ++ +A  L 
Sbjct: 281 NVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLL 340

Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             + +  +  N I++ +LI G  +  + +    L+  +  +  +PDA   S ++D
Sbjct: 341 GSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLID 395



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 159/332 (47%), Gaps = 35/332 (10%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TY  +I G CK   +D+A  LF +M    + P+VVTY +LI G C     + A 
Sbjct: 243 CSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAY 302

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL   M + G+ P+  T +V++D LCK+ ++ EA  LL  ++Q+ ++ N   Y++L+DG 
Sbjct: 303 RLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGL 362

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G+   A+ L  ++ S G   D  +Y+ LI+G C+ KE+ EA+ +  +M+ KG++P+ 
Sbjct: 363 CKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSP 422

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY  +   L      + + K+ ++M    +  D  TY  F                   
Sbjct: 423 VTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIF------------------- 463

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                    +++Y       C  GR+E A  +   +    +  ++VTYN +I G  N G 
Sbjct: 464 ---------VRSY-------CHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGL 507

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
             +A   F  M  N   PN   +  L+   ++
Sbjct: 508 TSQAFSTFKHMVANGCKPNEESYTVLLRLLIK 539



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 131/288 (45%), Gaps = 4/288 (1%)

Query: 89  FNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSME 148
            N  +  L ++  + +       M  R++R    TY+TL++ +CL G +  ++    S+ 
Sbjct: 44  LNAFLMALARHRMLADMESFASRMPARNLR----TYTTLINAYCLAGDLPASKRHLSSLL 99

Query: 149 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 208
             G   D  +Y   + GYC+   +  A  L+  M  +G   T  TY  L  GL     V 
Sbjct: 100 RAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVR 159

Query: 209 HALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLI 268
            A+ +F  MQ D  A D   Y T + GLC  G   EA  L         E ++  YN LI
Sbjct: 160 EAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALI 219

Query: 269 DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVA 328
           DG C  G LE+A+++F  +       +V TY  +I G C   ++D+A  LF  M +  + 
Sbjct: 220 DGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLV 279

Query: 329 PNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           PNV+ +  LI G     +      LL  M+   ++P+    S+++D L
Sbjct: 280 PNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDAL 327



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 145/350 (41%), Gaps = 88/350 (25%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N + Y ++IDGLCK G    A  L   +  +   PD  TY+SLI GLC   + +EA  
Sbjct: 349 KVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAML 408

Query: 73  LFFEMMDQGVQPSVVTFNVIMDEL-----------------------------------C 97
           +  +MM++GVQPS VT+ +I+DEL                                   C
Sbjct: 409 VLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYC 468

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
             G+M++A  ++  MV   V PN  TY+ L+ G+   G  ++A   F  M + GCK ++ 
Sbjct: 469 HEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEE 528

Query: 158 SYNILINGYCKNK----------------EVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
           SY +L+    K +                E++    L  EMV   +   +  YN     L
Sbjct: 529 SYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSL 588

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYN----------------TFIDGLCKNGYIVEA 245
             + +++ A  L  EMQ  ++      Y                 TF+D + K+GYI + 
Sbjct: 589 CRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQ- 647

Query: 246 VELFRTLGILKCEL-DIQ-------------------AYNCLIDGLCKSG 275
           +E +R +    CE   IQ                   A+  LIDGL + G
Sbjct: 648 LESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKG 697



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 112/291 (38%), Gaps = 51/291 (17%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ VTY  IID L +E   D +K +  +M    I PDV TY   +   CH     +A+ 
Sbjct: 419 QPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEH 478

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM---- 128
           +   M+D GV P++VT+N ++      G   +A      MV    +PN  +Y+ L+    
Sbjct: 479 MMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLI 538

Query: 129 -----------------------------------------------DGFCLTGKINRAE 141
                                                             C   +++ A+
Sbjct: 539 KKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAK 598

Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
            L   M+S      +  Y  +I   C+ K + EAL+    MV  G  P + +Y  +   L
Sbjct: 599 ILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSL 658

Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            E   ++ A ++F +M   +   +   +   IDGL + GY+ E   L   +
Sbjct: 659 CEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVM 709



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 16/202 (7%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKA----------------LFLQMKGENINPDVVTYN 55
           CKPN  +Y  ++  L K+   +   A                L  +M    +  ++  YN
Sbjct: 523 CKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYN 582

Query: 56  SLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
             +  LC  +  +EAK L  EM    + PS   +  I+   C+   + EA   +D MV+ 
Sbjct: 583 CFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKS 642

Query: 116 DVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 175
              P   +Y  ++   C  G I  A+++FG M S    ++++++ ILI+G  +   V E 
Sbjct: 643 GYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAEC 702

Query: 176 LSLYREMVSKGIKPTVVTYNTL 197
            SL   M  K  +P+   Y  L
Sbjct: 703 SSLLSVMEEKNYRPSDALYARL 724



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 65/156 (41%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           YN  +  LC+   +D+AK L ++M+  N+ P    Y S+I   C      EA      M+
Sbjct: 581 YNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMV 640

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
             G  P + ++  I+  LC+ G +  A ++   M+ ++       +  L+DG    G + 
Sbjct: 641 KSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVA 700

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
               L   ME    +  D  Y  L        +++E
Sbjct: 701 ECSSLLSVMEEKNYRPSDALYARLTGKITDANDIQE 736



 Score = 41.6 bits (96), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 41/94 (43%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   +Y  II  LC+EG +  AK +F  M  +  N + + +  LI GL       E   L
Sbjct: 646 PQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSL 705

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR 107
              M ++  +PS   +  +  ++     + E +R
Sbjct: 706 LSVMEEKNYRPSDALYARLTGKITDANDIQEIAR 739


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 198/399 (49%), Gaps = 38/399 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   YN++I GL K   +D+A++  ++M    + P+  TY + I G   A+++  A + 
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM + GV P+ V    +++E CK  K+ EA      MV + +  +A TY+ LM+G   
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K++ AEE+F  M   G   D  SY +LING+ K   +++A S++ EMV +G+ P V+ 
Sbjct: 605 NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 664

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  G     ++E A +L +EM    +  +  TY T IDG CK+G + EA  LF  + 
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELF---------RSLPRRVLVADV-------- 296
           +     D   Y  L+DG C+   +E A+ +F          + P   L+  V        
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784

Query: 297 ---------------------VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
                                VTYNIMI  LC +G ++ A +LF  M+   + P VI + 
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +L++G+ ++ + +++  +  +     + PD  + S++++
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 181/381 (47%), Gaps = 35/381 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND------- 66
           P    Y ++I+G C+E  V +   L ++MK  NI     TY +++ G+C + D       
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439

Query: 67  ----------------------------WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                                       + +A R+  EM +QG+ P +  +N ++  L K
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
             +MDEA   L  MV+  ++PNAFTY   + G+    +   A++    M   G   + V 
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
              LIN YCK ++V EA S YR MV +GI     TY  L  GLF+  +V+ A ++F EM+
Sbjct: 560 CTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +A D  +Y   I+G  K G + +A  +F  +       ++  YN L+ G C+SG +E
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            A EL   +  + L  + VTY  +I G C  G + +A  LF +M+   + P+  ++ TL+
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739

Query: 339 HGFVRINKPSKVIELLHKMKE 359
            G  R+N   + I +    K+
Sbjct: 740 DGCCRLNDVERAITIFGTNKK 760



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 191/371 (51%), Gaps = 11/371 (2%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E GV+  PN V    +I+  CK+  V +A + +  M  + I  D  TY  L++GL   + 
Sbjct: 550 ECGVL--PNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            ++A+ +F EM  +G+ P V ++ V+++   K G M +AS + D MV+  + PN   Y+ 
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ GFC +G+I +A+EL   M   G   + V+Y  +I+GYCK+ ++ EA  L+ EM  KG
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
           + P    Y TL  G   ++ VE A+ +F    +   A+ T+ +N  I+ + K G      
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKT 786

Query: 247 ELFRTLGILKCELDI------QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
           E+   L  +    D         YN +ID LCK G LE A ELF  +    L+  V+TY 
Sbjct: 787 EVLNRL--MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +++G    G+  +   +F +     + P+ I++  +I+ F++    +K + L+ +M  K
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904

Query: 361 KVMPDASIVSM 371
             + D   +S+
Sbjct: 905 NAVDDGCKLSI 915



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 173/375 (46%), Gaps = 36/375 (9%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY T++ G+C  G +D A  +  +M      P+VV Y +LI      + + +A R+  EM
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF------ 131
            +QG+ P +  +N ++  L K  +MDEA   L  MV+  ++PNAFTY   + G+      
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538

Query: 132 -----------------------------CLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
                                        C   K+  A   + SM   G   D  +Y +L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVL 598

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
           +NG  KN +V++A  ++REM  KGI P V +Y  L  G  ++  ++ A  +F+EM  + +
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658

Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
             +   YN  + G C++G I +A EL   + +     +   Y  +IDG CKSG L  A  
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718

Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
           LF  +  + LV D   Y  ++ G C    +++A  +F    +   A +   F  LI+   
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVF 777

Query: 343 RINKPSKVIELLHKM 357
           +  K     E+L+++
Sbjct: 778 KFGKTELKTEVLNRL 792



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 183/361 (50%), Gaps = 10/361 (2%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY  +++GL K   VD A+ +F +M+G+ I PDV +Y  LI+G     +  +A  +F EM
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +++G+ P+V+ +N+++   C++G++++A  LLD M  + + PNA TY T++DG+C +G +
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
             A  LF  M+  G   D   Y  L++G C+  +VE A++++     KG   +   +N L
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNAL 772

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDV----AADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
              +F+  + E   ++   +           +  TYN  ID LCK G +  A ELF  + 
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                  +  Y  L++G  K GR      +F       +  D + Y+++I+    +G   
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892

Query: 314 KAHDLFLDM-EENAVAPNVIIFVT----LIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           KA  L   M  +NAV     + ++    L+ GF ++ +     +++  M   + +PD++ 
Sbjct: 893 KALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952

Query: 369 V 369
           V
Sbjct: 953 V 953



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 196/406 (48%), Gaps = 46/406 (11%)

Query: 10  VVCK---PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           ++CK   P   TY+ +IDGLCK   ++ AK+L ++M    ++ D  TY+ LI GL    +
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            + AK L  EM+  G+      ++  +  + K G M++A  L D M+   + P A  Y++
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L++G+C    + +  EL   M+         +Y  ++ G C + +++ A ++ +EM++ G
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK-------- 238
            +P VV Y TL     +  +   A+++ +EM+   +A D   YN+ I GL K        
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507

Query: 239 ----------------------NGYIVEAVEL---------FRTLGILKCELDIQAYNCL 267
                                 +GYI EA E           R  G+L  ++       L
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYI-EASEFASADKYVKEMRECGVLPNKVLCTG---L 563

Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAV 327
           I+  CK  ++  A   +RS+  + ++ D  TY ++++GL  + ++D A ++F +M    +
Sbjct: 564 INEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623

Query: 328 APNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           AP+V  +  LI+GF ++    K   +  +M E+ + P+  I +M++
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 160/338 (47%), Gaps = 45/338 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +Y  +I+G  K G + KA ++F +M  E + P+V+ YN L+ G C + +  +AK L
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM  +G+ P+ VT+  I+D  CK+G + EA RL D M  + + P++F Y+TL+DG C 
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744

Query: 134 TGKINRAEELFGSMESMGC---------------------------------------KH 154
              + RA  +FG+ +  GC                                       K 
Sbjct: 745 LNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           +DV+YNI+I+  CK   +E A  L+ +M +  + PTV+TY +L  G  ++ +      +F
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK-----CELDIQAYNCLID 269
           +E     +  D   Y+  I+   K G   +A+ L   +         C+L I     L+ 
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLS 923

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           G  K G +E+A ++  ++ R   + D  T   +I+  C
Sbjct: 924 GFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/391 (23%), Positives = 175/391 (44%), Gaps = 21/391 (5%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           +  +G+   P       ++D L +   +D    ++  M   N+  DV TY+ LI   C A
Sbjct: 175 SSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRA 234

Query: 65  NDWNEAKRLFFE---------------------MMDQGVQPSVVTFNVIMDELCKNGKMD 103
            +    K + F+                     M+ +G+ P   T++V++D LCK  +++
Sbjct: 235 GNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLE 294

Query: 104 EASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILI 163
           +A  LL  M    V  +  TYS L+DG       + A+ L   M S G       Y+  I
Sbjct: 295 DAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCI 354

Query: 164 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVA 223
               K   +E+A +L+  M++ G+ P    Y +L  G      V    +L  EM++ ++ 
Sbjct: 355 CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIV 414

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL 283
               TY T + G+C +G +  A  + + +    C  ++  Y  LI    ++ R   A+ +
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRV 474

Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            + +  + +  D+  YN +I GL    +MD+A    ++M EN + PN   +   I G++ 
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534

Query: 344 INKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            ++ +   + + +M+E  V+P+  + + +++
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLIN 565



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 167/373 (44%), Gaps = 36/373 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    +++I+   C + FV K+              D V +  L  G        EA  +
Sbjct: 129 PVAEVWSSIVR--CSQEFVGKSD-------------DGVLFGILFDGYIAKGYIEEAVFV 173

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F   M   + P +    V++D L +  ++D    +   MV+R+V  +  TY  L+   C 
Sbjct: 174 FSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCR 233

Query: 134 TGKINRAEELF---------------GSM---ESMGCK---HDDVSYNILINGYCKNKEV 172
            G +   +++                G++   ESM CK       +Y++LI+G CK K +
Sbjct: 234 AGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRL 293

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           E+A SL  EM S G+     TY+ L  GL +    + A  L  EM    +      Y+  
Sbjct: 294 EDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCC 353

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
           I  + K G + +A  LF  +         QAY  LI+G C+   +    EL   + +R +
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413

Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
           V    TY  ++ G+C+ G +D A+++  +M  +   PNV+I+ TLI  F++ ++    + 
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMR 473

Query: 353 LLHKMKEKKVMPD 365
           +L +MKE+ + PD
Sbjct: 474 VLKEMKEQGIAPD 486



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 89/168 (52%), Gaps = 7/168 (4%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTYN +ID LCKEG ++ AK LF QM+  N+ P V+TY SL++G        E   
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV-----RPNAFTYSTL 127
           +F E +  G++P  + ++VI++   K G   +A  L+D M  ++      + +  T   L
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC--KNKEVE 173
           + GF   G++  AE++  +M  +    D  +   LIN  C   N+ VE
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVE 969



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 154/387 (39%), Gaps = 82/387 (21%)

Query: 47  INPDVVTYNSLIHGLCHANDWNEAKRL--FFEMMDQG--VQPSVVTFNVIMDELCKNGKM 102
           INP+VV        +  +   ++  +L  FF  +D     +  + +F+ +  +LC  G  
Sbjct: 60  INPEVVL------SVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSF 113

Query: 103 DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
           ++A  +++ M++R+  P A  +S+++   C             S E +G   D V + IL
Sbjct: 114 EKALSVVERMIERN-WPVAEVWSSIVR--C-------------SQEFVGKSDDGVLFGIL 157

Query: 163 INGYCKNKEVEEAL-----------------------------------SLYREMVSKGI 187
            +GY     +EEA+                                    +Y+ MV + +
Sbjct: 158 FDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNV 217

Query: 188 KPTVVTYNTLFLG-------------LFEIHQ--------VEHALKLFEEMQRDDVAADT 226
              V TY+ L +              LF+  +        V+ ALKL E M    +    
Sbjct: 218 VFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLK 277

Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            TY+  IDGLCK   + +A  L   +  L   LD   Y+ LIDGL K    + A  L   
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +    +      Y+  I  +  +G M+KA  LF  M  + + P    + +LI G+ R   
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVV 373
             +  ELL +MK++ ++        VV
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVV 424



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 21/173 (12%)

Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
           D   +    DG    GYI EAV +F +   L+    +     L+D L +  RL++  +++
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE-------------------- 324
           + +  R +V DV TY+++I   C  G +    D+    E+                    
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMI 269

Query: 325 -NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
              + P    +  LI G  +I +      LL +M    V  D    S+++D L
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL 322


>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 823

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 201/401 (50%), Gaps = 37/401 (9%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C PN V YNTII G CK G ++ AK +F ++K +   P + T+ ++I+G C   D+ 
Sbjct: 233 GKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFV 292

Query: 69  EAKRLFFEMMDQGV-----------------------------------QPSVVTFNVIM 93
            + RL  E+ ++G+                                   +P + T+N+++
Sbjct: 293 ASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILI 352

Query: 94  DELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCK 153
           + LCK GK + A+ LLD   ++ +     +Y+ L+  +C + + + A +L   +   GCK
Sbjct: 353 NRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCK 412

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            D V+Y ILI+G   +  +++A+++  +++ +G+ P    YN L  GL +  +   A  L
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK-CELDIQAYNCLIDGLC 272
           F EM    +  D   Y T IDG  ++G   EA ++F TL + K  ++D+  +N +I G C
Sbjct: 473 FSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVF-TLSVEKGVKVDVVHHNAMIKGFC 531

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           +SG L+ AL     +    LV D  TY+ +I G      M  A  +F DME+N   PNV+
Sbjct: 532 RSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVV 591

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            + +LI+GF      S   E   +M+ + ++P+    + ++
Sbjct: 592 TYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLI 632



 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 173/333 (51%), Gaps = 1/333 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+  TYN +I+ LCKEG  + A  L  +   + +    ++Y  LI   C + +++ A 
Sbjct: 341 CKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIAS 400

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L  ++ ++G +P +VT+ +++  L  +G MD+A  +   ++ R V P+A  Y+ LM G 
Sbjct: 401 KLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C TG+   A+ LF  M       D   Y  LI+G+ ++ + +EA  ++   V KG+K  V
Sbjct: 461 CKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDV 520

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           V +N +  G      ++ AL     M  + +  D  TY+T IDG  K   +  A+++FR 
Sbjct: 521 VHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRD 580

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +   KC+ ++  Y  LI+G C  G   +A E F+ +  R LV +VVTY  +I     +  
Sbjct: 581 MEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESS 640

Query: 312 -MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
            ++KA   +  M  N   PN + F  L+ GFV+
Sbjct: 641 TLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK 673



 Score =  167 bits (422), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 180/393 (45%), Gaps = 37/393 (9%)

Query: 19  YNT--IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           Y+T  ++ G+C EG V++ + L     G+   P++V YN++I G C   D   AK +F E
Sbjct: 206 YSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKE 265

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLD-------------------------- 110
           +  +G  P++ TF  +++  CK G    + RLL+                          
Sbjct: 266 LKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGF 325

Query: 111 ---------LMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
                     +V  D +P+  TY+ L++  C  GK   A  L       G    ++SY  
Sbjct: 326 KVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAP 385

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LI  YCK+KE + A  L  ++  +G KP +VTY  L  GL     ++ A+ +  ++    
Sbjct: 386 LIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           V+ D + YN  + GLCK G  + A  LF  +       D   Y  LIDG  +SG  + A 
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEAR 505

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           ++F     + +  DVV +N MI G C  G +D+A      M E  + P+   + T+I G+
Sbjct: 506 KVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY 565

Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           V+    +  I++   M++ K  P+    + +++
Sbjct: 566 VKQQDMATAIKIFRDMEKNKCKPNVVTYTSLIN 598



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 163/345 (47%), Gaps = 15/345 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKP+ VTY  +I GL   G +D A  + +++    ++PD   YN L+ GLC    +  AK
Sbjct: 411 CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAK 470

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+D+ + P    +  ++D   ++G  DEA ++  L V++ V+ +   ++ ++ GF
Sbjct: 471 LLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGF 530

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C +G ++ A      M       D  +Y+ +I+GY K +++  A+ ++R+M     KP V
Sbjct: 531 CRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNV 590

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE-AVELFR 250
           VTY +L  G         A + F+EMQ  D+  +  TY T I    K    +E AV  + 
Sbjct: 591 VTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWE 650

Query: 251 TLGILKCELDIQAYNCLIDGLCK--SGRLE------------IALELFRSLPRRVLVADV 296
            +   KC  +   +NCL+ G  K  SGR              +  E F  +         
Sbjct: 651 LMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHG 710

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
             YN ++  LC  G +  A  L   M +   +P+ + F  ++HGF
Sbjct: 711 AAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGF 755



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 162/330 (49%), Gaps = 16/330 (4%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+   YN ++ GLCK G    AK LF +M   +I PD   Y +LI G   + D++EA+++
Sbjct: 448 PDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKV 507

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F   +++GV+  VV  N ++   C++G +DEA   ++ M +  + P+ FTYST++DG+  
Sbjct: 508 FTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              +  A ++F  ME   CK + V+Y  LING+C   +   A   ++EM S+ + P VVT
Sbjct: 568 QQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVT 627

Query: 194 YNTLFLGLF-EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK-------------- 238
           Y TL      E   +E A+  +E M  +    +  T+N  + G  K              
Sbjct: 628 YTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFN 687

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           +G      E F  +          AYN ++  LC  G ++ A  L   + ++    D V+
Sbjct: 688 HGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVS 747

Query: 299 YNIMIHGLCNDGQMDKAHDL-FLDMEENAV 327
           +  ++HG C  G   +  ++ F +++E  +
Sbjct: 748 FAAILHGFCVVGNSKQWRNMDFRNLDEKGL 777



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 164/338 (48%), Gaps = 5/338 (1%)

Query: 42  MKGENINPDVVTYNSLIHGLCHANDWNEAKRLF---FEMMDQGVQPSVVTFNVIMDELCK 98
           ++ EN+       + ++H    +   ++A  ++    E+ D    P V+  N ++  + K
Sbjct: 125 LRNENVKLTHEALSHVLHAYAESGFLSKAVEIYDYVVELYDS--VPDVIACNALLSLVVK 182

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           + ++++A ++ D M +R    + ++   ++ G C  GK+    +L       GC  + V 
Sbjct: 183 SRRLEDARKVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVF 242

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN +I GYCK  ++E A  +++E+  KG  PT+ T+ T+  G  +      + +L EE++
Sbjct: 243 YNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVK 302

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              +       N  ID   ++G+ V+  E  R +    C+ DI  YN LI+ LCK G+ E
Sbjct: 303 ERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKE 362

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           +A  L     ++ L+   ++Y  +I   C   + D A  L L + E    P+++ +  LI
Sbjct: 363 VAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILI 422

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           HG V        + +  K+ ++ V PDA+I +M++  L
Sbjct: 423 HGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 52/226 (23%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN VTY ++I+G C +G    A+  F +M+  ++ P+VVTY +LI      +   E  
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKA 645

Query: 72  RLFFE-MMDQGVQPSVVTFNVIMDE----------------------------------- 95
             ++E MM     P+ VTFN ++                                     
Sbjct: 646 VYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDG 705

Query: 96  --------------LCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
                         LC +G +  A  L D MV++   P+  +++ ++ GFC+ G   +  
Sbjct: 706 WSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFCVVGNSKQWR 765

Query: 142 EL-FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
            + F +++  G +   V Y+ ++  +     + EA ++   MV K 
Sbjct: 766 NMDFRNLDEKGLEV-AVRYSRVLEQHLPKAVICEASTILHAMVEKA 810


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/331 (34%), Positives = 181/331 (54%), Gaps = 6/331 (1%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E G+V  P+ +TYNTII G C+EG V+KA     +M  ++  PD+ T N L+ GLC    
Sbjct: 257 ESGLV--PHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGM 314

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            + A +LF   + +G     VT+N I+  LCK G+ +EA  LL  M ++ + P+ +TY+ 
Sbjct: 315 LDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNA 374

Query: 127 LMDGFC-LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           ++       G++ +A +    M     K D  + NIL+ G C    ++ AL L+   +SK
Sbjct: 375 ILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISK 434

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ-RDDVAADTSTYNTFIDGLCKNGYIVE 244
           G     VTYNT+  GL +  + E A  L  EM+ ++ +  D +TYNT I G C+ G + +
Sbjct: 435 GKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEK 494

Query: 245 AVELFRTLGILKC-ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           A + FR   + K  + D+   N L+ GLC+ G L  AL+LF +   +    D VTYN +I
Sbjct: 495 AFQ-FRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTII 553

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
            GLC +G+ ++A DL  +M+E  + P+   +
Sbjct: 554 SGLCKEGRFEEAFDLLAEMKEKKLGPDCYTY 584



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 183/361 (50%), Gaps = 10/361 (2%)

Query: 12  CKPNTVTYNTIID--GLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           C P+  +YNTI+D   LC+ G  D++     ++    + P  +TYN++IHG C      +
Sbjct: 223 CFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEK 282

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A +   +M+++  +P + T N+++  LC  G +D A +L +  + +    +A TY+T++ 
Sbjct: 283 AFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIIS 342

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK-EVEEALSLYREMVSKGIK 188
           G C  G+   A +L   ME      D  +YN ++      + +VE+A     +MV K  K
Sbjct: 343 GLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFK 402

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P + T N L  GL     +++ALKLF        A D  TYNT I GLCK G   EA +L
Sbjct: 403 PDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDL 462

Query: 249 FRTL----GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
              +    G++    D   YN +I G C+ G++E A +    +  +    D+ T NI++ 
Sbjct: 463 LAEMEEKNGLVP---DQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLR 519

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           GLC +G + KA  LF        A + + + T+I G  +  +  +  +LL +MKEKK+ P
Sbjct: 520 GLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGP 579

Query: 365 D 365
           D
Sbjct: 580 D 580



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/303 (35%), Positives = 161/303 (53%), Gaps = 2/303 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  T N ++ GLC EG +D A  LF     +    D VTYN++I GLC    + EA  
Sbjct: 296 KPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFD 355

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELC-KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           L  EM ++ + P   T+N I+  L    G++++A +  + MV++  +P+ FT + L+ G 
Sbjct: 356 LLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGL 415

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPT 190
           C  G ++ A +LF +  S G   D V+YN +I+G CK    EEA  L  EM  K G+ P 
Sbjct: 416 CTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPD 475

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
             TYNT+ LG     QVE A +   +M       D  T N  + GLC+ G +V+A++LF 
Sbjct: 476 QTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFN 535

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
           T       +D   YN +I GLCK GR E A +L   +  + L  D  TYN ++  L + G
Sbjct: 536 TWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAG 595

Query: 311 QMD 313
           +M+
Sbjct: 596 RME 598



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 188/388 (48%), Gaps = 26/388 (6%)

Query: 13  KPNTVTYNTIIDGLCK---EGFVDKAKALFL-------------------QMKGENINPD 50
           KPN +T NT+I+ L +   +  V  +KA+F                    +MK  +  PD
Sbjct: 167 KPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIKFGVKNKLSEAIGLIGKMKDFSCFPD 226

Query: 51  VVTYNSLIH--GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
             +YN+++    LC +   +++     E+++ G+ P  +T+N I+   C+ G++++A + 
Sbjct: 227 NASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQF 286

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
            + MV++  +P+ FT + L+ G C  G ++ A +LF +  S G   D V+YN +I+G CK
Sbjct: 287 RNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCK 346

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH-QVEHALKLFEEMQRDDVAADTS 227
               EEA  L  EM  K + P   TYN +   L +   QVE A +   +M       D  
Sbjct: 347 EGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLF 406

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           T N  + GLC  G +  A++LF T       +D   YN +I GLCK GR E A +L   +
Sbjct: 407 TCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEM 466

Query: 288 PRR-VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
             +  LV D  TYN +I G C +GQ++KA      M E +  P++     L+ G  R   
Sbjct: 467 EEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGM 526

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVD 374
             K ++L +    K    DA   + ++ 
Sbjct: 527 LVKALKLFNTWISKGKAIDAVTYNTIIS 554



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 177/357 (49%), Gaps = 26/357 (7%)

Query: 35  AKALFLQMKGENINPDVVTYNSLIHGLCH----------------------ANDWNEAKR 72
           A  +F +MK  ++ P+++T N+LI+ L                         N  +EA  
Sbjct: 154 AAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIKFGVKNKLSEAIG 213

Query: 73  LFFEMMDQGVQPSVVTFNVIMD--ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           L  +M D    P   ++N I+D   LC++GK D++   L+ +++  + P+  TY+T++ G
Sbjct: 214 LIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHG 273

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +C  G++ +A +    M     K D  + NIL+ G C    ++ AL L+   +SKG    
Sbjct: 274 YCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAID 333

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            VTYNT+  GL +  + E A  L  EM+   +  D  TYN  +  L      VE    FR
Sbjct: 334 AVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFR 393

Query: 251 TLGILKC-ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
              + K  + D+   N L+ GLC  G L+ AL+LF +   +    D VTYN +I GLC +
Sbjct: 394 NKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKE 453

Query: 310 GQMDKAHDLFLDMEE-NAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           G+ ++A DL  +MEE N + P+   + T+I G+ R  +  K  +  +KM EK   PD
Sbjct: 454 GRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPD 510



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 1/134 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  TYNTII G C+EG V+KA     +M  ++  PD+ T N L+ GLC      +A +L
Sbjct: 474 PDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKL 533

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F   + +G     VT+N I+  LCK G+ +EA  LL  M ++ + P+ +TY+ ++     
Sbjct: 534 FNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALAD 593

Query: 134 TGKINRAEELFGSM 147
            G++  AEE    +
Sbjct: 594 AGRM-EAEEFMSKI 606



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 30/230 (13%)

Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI------------------ 204
           I  Y        A  ++  M    +KP ++T NTL   L                     
Sbjct: 142 IGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIK 201

Query: 205 ----HQVEHALKLFEEMQRDDVAADTSTYNTFID--GLCKNGYIVEAVELFRTL---GIL 255
               +++  A+ L  +M+      D ++YNT +D   LC++G   ++++    L   G++
Sbjct: 202 FGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLV 261

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
             ++    YN +I G C+ G++E A +    +  +    D+ T NI++ GLC +G +D A
Sbjct: 262 PHQI---TYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNA 318

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
             LF        A + + + T+I G  +  +  +  +LL +M+EKK+ PD
Sbjct: 319 LKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPD 368


>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 721

 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 131/420 (31%), Positives = 202/420 (48%), Gaps = 53/420 (12%)

Query: 4   GNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH 63
            NGE+    K     +N++I    + G   ++  LF  MK   ++P VVT+NS++  L  
Sbjct: 147 SNGEV----KLEDRFFNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLK 202

Query: 64  ANDWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
               N AK ++ EM+   GV+P   T+N+++   CKN  +DE       M   D  P+  
Sbjct: 203 RGRTNMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVV 262

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKH---DDVSYNILINGYCKNKEVEEALSLY 179
           TY+TL+DG C  GKI  A  L   M S  CK    D V+Y  LI GYC+ +EV+EAL + 
Sbjct: 263 TYNTLVDGLCRAGKIKVAHNLVNGM-SKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDIL 321

Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQ--------------------------------- 206
            EM  +G+KP +VTYNTL  GL E  +                                 
Sbjct: 322 EEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCC 381

Query: 207 ---VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD--- 260
              ++ A K+FE M++ +V+AD+++Y+  I  LC+ G   +A  LF  L   +  L    
Sbjct: 382 AGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYG 441

Query: 261 ----IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
                 +Y C+   LC++G+ + A  + R L +R    D ++Y I+I G C +G  +  +
Sbjct: 442 PKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRG-TQDPLSYQIVILGHCKEGSYENGY 500

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            L + M      P++ I+  LI GF+R +KP    E L KM +    P  S    +++ L
Sbjct: 501 GLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRL 560



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 137/262 (52%), Gaps = 7/262 (2%)

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMG---CKHDDVSYNILINGYCKNKEVEEAL 176
           N  TY  +++       +N A     S+E       K +D  +N LI  Y +    +E++
Sbjct: 116 NPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAGLFKESV 175

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTFIDG 235
            L+  M   G+ P VVT+N++ L L +  +   A ++++EM +   V  DT TYN  I G
Sbjct: 176 KLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILIRG 235

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV--LV 293
            CKN  + E    F+ +    C+ D+  YN L+DGLC++G++++A  L   + ++   L 
Sbjct: 236 FCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLS 295

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            DVVTY  +I G C   ++D+A D+  +M    + PN++ + TLI G     K  K+ E+
Sbjct: 296 PDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEI 355

Query: 354 LHKMK-EKKVMPDASIVSMVVD 374
           L +MK +   +PDA   + +++
Sbjct: 356 LEQMKGDGGSIPDACTFNTLIN 377



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 142/345 (41%), Gaps = 48/345 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+NT+I+  C  G +D+A  +F  MK   ++ D  +Y+ LI  LC   D+ +A+ L
Sbjct: 367 PDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEML 426

Query: 74  FFEMMDQ-------GVQPSVVTFNVIMDELCKNGKMDEASR------------------- 107
           F E+ ++       G +P   ++  +   LC+NGK  +A R                   
Sbjct: 427 FDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQDPLSYQIV 486

Query: 108 ---------------LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
                          LL  M++RD  P+   Y  L+DGF    K   A+E    M     
Sbjct: 487 ILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSY 546

Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
           K    +++ ++N   +   V E+  +   M+ + I+  +         LF+    + A K
Sbjct: 547 KPQTSTWHSILNRLLEQGCVHESAGVIVMMLERNIRQNINFSTKCLQLLFDRGLQDKAFK 606

Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC--ELDIQAYNCLIDG 270
           + E + ++           F   LC     +EA +L   L  LK    +DI   N +I  
Sbjct: 607 ITELIYKNGFCVKMDEVVQF---LCNKRRALEACKLL--LFSLKNNENIDIGLCNIVILD 661

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
           LCK  +   A  L   L  + L  D++  N ++  L   G+ ++A
Sbjct: 662 LCKLNKASEAFSLCYELVDKGLHQDLICLNDLVAALEAGGRTEEA 706



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 107/242 (44%), Gaps = 36/242 (14%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           + ++Y  +I G CKEG  +    L + M   +  PD+  Y+ LI G    +    AK   
Sbjct: 479 DPLSYQIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETL 538

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN-------------- 120
            +M+    +P   T++ I++ L + G + E++ ++ +M++R++R N              
Sbjct: 539 EKMLKSSYKPQTSTWHSILNRLLEQGCVHESAGVIVMMLERNIRQNINFSTKCLQLLFDR 598

Query: 121 -----AFTYSTLM--DGFCLTGKINRAEELFGSMESM--GCK----------HDDVSY-N 160
                AF  + L+  +GFC+  K++   +   +       CK          + D+   N
Sbjct: 599 GLQDKAFKITELIYKNGFCV--KMDEVVQFLCNKRRALEACKLLLFSLKNNENIDIGLCN 656

Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
           I+I   CK  +  EA SL  E+V KG+   ++  N L   L    + E A  + + + R 
Sbjct: 657 IVILDLCKLNKASEAFSLCYELVDKGLHQDLICLNDLVAALEAGGRTEEAAFISKRVPRP 716

Query: 221 DV 222
           ++
Sbjct: 717 EL 718


>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 913

 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 186/364 (51%), Gaps = 1/364 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ ++Y  +I+   K G V KA A+  +M+   I  +  TY+ LI G  H +D+  A R+
Sbjct: 450 PSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRI 509

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM+  G+QP    +N++++  CK G MD A R+L+ M +  ++P+   +  +++GF +
Sbjct: 510 FEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAV 569

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G + RA ++   M   GC    ++YN LI+G  +  +VE A+S+  +M   GI P   T
Sbjct: 570 AGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHT 629

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  +  G      +  A + F +++   +  D   Y T +   CK+G +  A+ + R + 
Sbjct: 630 YTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMS 689

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K   +   YN LIDG  + G +  A +L + +    +  ++ TY   I+  C  G M 
Sbjct: 690 SQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQ 749

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD-ASIVSMV 372
           +A  +  +M +  + PN+  + TLI G+ R + P + ++   +MK   + PD A+   +V
Sbjct: 750 RAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLV 809

Query: 373 VDLL 376
             LL
Sbjct: 810 TSLL 813



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 171/393 (43%), Gaps = 35/393 (8%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           + KP+   +  +I    K G    A+A F  M+   I P+   + SL+H    A D   A
Sbjct: 272 IPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGA 331

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
                EM  +G++ ++VT+++++    K      A  L           N   YS ++  
Sbjct: 332 LSCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHA 391

Query: 131 FCLTGKINRAEELFGSMESMGCK----------------HDD------------------ 156
            C +G ++RAEEL   ME  G                   D+                  
Sbjct: 392 HCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPS 451

Query: 157 -VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
            +SY  LIN Y K  +V +A+++ +EM S GIK    TY+ L  G   +H   +A ++FE
Sbjct: 452 IISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFE 511

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
           EM +  +  D + YN  I+  CK G +  A+ +   +   + +   +A+  +I+G   +G
Sbjct: 512 EMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAG 571

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
            ++ AL++   + R      V+TYN +IHGL    Q+++A  +   M    + PN   + 
Sbjct: 572 DMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYT 631

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            ++ G+      +K  E   K+KE  +  D  I
Sbjct: 632 IIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYI 664



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 142/294 (48%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+   YN +I+  CK G +D+A  +  +M+ E + P    +  +I G   A D   A  
Sbjct: 519 QPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALD 578

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M   G  P+V+T+N ++  L +  +++ A  +L+ M    + PN  TY+ +M G+ 
Sbjct: 579 ILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYA 638

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            TG I +A E F  ++  G K D   Y  L+   CK+  ++ AL++ REM S+ I     
Sbjct: 639 ATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTF 698

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN L  G      V  A  L ++M+ D V  +  TY ++I+  CK G +  A  +   +
Sbjct: 699 VYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEM 758

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
             +  + +++ Y  LI G  ++   + AL+ F  +    L  D   Y+ ++  L
Sbjct: 759 SDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLVTSL 812



 Score =  117 bits (294), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 114/234 (48%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  +TYN +I GL ++  V++A ++  +M    I P+  TY  ++ G     D  +A 
Sbjct: 588 CAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAF 647

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             F ++ + G++  V  +  ++   CK+G+M  A  +   M  + +  N F Y+ L+DG+
Sbjct: 648 EYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGW 707

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G +  A +L   M+  G   +  +Y   IN  CK  +++ A ++  EM   G+KP +
Sbjct: 708 ARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNL 767

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            TY TL  G       + ALK FEEM+   +  D + Y+  +  L     ++E 
Sbjct: 768 KTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEG 821



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/286 (22%), Positives = 132/286 (46%), Gaps = 5/286 (1%)

Query: 94  DELCKNGKMDEASRLLDLMV-----QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSME 148
           DE C+  +    SR  D        +R  +P+   +  ++  +   G  + A   F +M 
Sbjct: 245 DEACREFRRVVESRPEDWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMR 304

Query: 149 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 208
           + G + +   +  L++ Y   +++  ALS   EM ++GI+ T+VTY+ L  G  +I+  +
Sbjct: 305 ARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGKINDTQ 364

Query: 209 HALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLI 268
            A  LF+E + +    +   Y+  I   C++G +  A EL   +     +  I AY+ ++
Sbjct: 365 SADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMM 424

Query: 269 DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVA 328
            G       +  L +F  L        +++Y  +I+     G++ KA  +  +ME + + 
Sbjct: 425 HGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIK 484

Query: 329 PNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            N   +  LI GF+ ++  +    +  +M +  + PD +I +++++
Sbjct: 485 HNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIE 530



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 47/93 (50%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  TY + I+  CK G + +A+ +  +M    + P++ TY +LI G   A+  + A + 
Sbjct: 730 PNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKC 789

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           F EM   G++P    ++ ++  L     + E S
Sbjct: 790 FEEMKLAGLKPDEAAYHCLVTSLLSRATVMEGS 822


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 184/360 (51%), Gaps = 3/360 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    +N ++  L + G +  A+ +F +M+   +   VV++N++I G+C A D + A+ L
Sbjct: 238 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETL 297

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M + GV P V T+  ++  LC+ G++++A  + + M  R ++PNA  ++ L+D  C 
Sbjct: 298 HRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCK 357

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G      EL   M   G + D V+YN ++NG C+ ++++ A  +  EM S G++P  VT
Sbjct: 358 KGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVT 417

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G  +  +++ A+++ + M  + V  D  TY   I GL K G   +A  +   + 
Sbjct: 418 YTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMM 477

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               E D   Y  +ID  C+ G ++  L L + +  +     VVTYN++++G C  GQM 
Sbjct: 478 EAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMK 537

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  L   M    V+P+ I +  L+ G  +  K + + EL      K  +PD  + + +V
Sbjct: 538 NADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL---KSAKGTVPDLGVYTSIV 594



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 170/341 (49%)

Query: 34  KAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIM 93
           +A A +LQ+    + P+   +N L+  L    +   A+ +F EM  +GV+ +VV+FN ++
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282

Query: 94  DELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCK 153
             +C+ G +D A  L   M +  V P+ +TY  L+ G C  G+I  A  +F  M   G K
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            + V + ILI+ +CK  + E  L L+REM  +G++P  VTYN +  GL     ++ A  +
Sbjct: 343 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 402

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
             EM+   +  DT TY T IDG CK   +  A+E+ + +      LD   Y  LI GL K
Sbjct: 403 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 462

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           +GR   A  +   +    L  D  TY ++I   C  G +     L  +M+     P V+ 
Sbjct: 463 AGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVT 522

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +  +++GF ++ +      LL+ M    V PD    ++++D
Sbjct: 523 YNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLD 563



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 139/261 (53%), Gaps = 3/261 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V +  +ID  CK+G  +    L  +M+   + PD VTYN++++GLC A D   A  
Sbjct: 342 KPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASG 401

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM   G++P  VT+  ++D  CK  ++D A  +   MV   V  +  TY+ L+ G  
Sbjct: 402 IVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLS 461

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G+   AE + G M   G + D+ +Y ++I+ +C+  +V+  L L +EM +KG KP VV
Sbjct: 462 KAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVV 521

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TYN +  G  ++ Q+++A  L   M    V+ D  TYN  +DG CK+G + +  EL    
Sbjct: 522 TYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSAK 581

Query: 253 GILKCELDIQAYNCLIDGLCK 273
           G +    D+  Y  ++  + K
Sbjct: 582 GTVP---DLGVYTSIVGEIVK 599


>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
          Length = 612

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 175/340 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    +N ++  + + G +  A+ +F +M    + P VVT+N+L+ G+C A+D N A  L
Sbjct: 240 PEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANAL 299

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M   G+ P V T+   +  LCK G++ +A  + + M +R + PN    +TL+D  C 
Sbjct: 300 RGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCK 359

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +    EL   M + G K D V+YN L+NG+C+ ++++ A  +  EM   G+KP  VT
Sbjct: 360 EGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVT 419

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G  +  +++ A+++ +EM  + VA D  TY   I GL K G  V+A  +   + 
Sbjct: 420 YTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMM 479

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D   Y  +ID  CK+G ++   +  + +  +     +VTYN++++G C+ GQM 
Sbjct: 480 EAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMK 539

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
            A  L   M    V PN I +  L+ G  +  K     EL
Sbjct: 540 NADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEEL 579



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 171/343 (49%)

Query: 32  VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           V +A A +L +    + P+   +N L+  +  +     A+ +F EM+ +GVQP+VVTFN 
Sbjct: 223 VPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNT 282

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           +M  +CK   ++ A+ L  LM +  + P+ +TY   + G C TG+I  A E+F  M   G
Sbjct: 283 LMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG 342

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
              + V    LI+ +CK  +V   L L  EM ++G+K  +V YN L  G   +  ++ A 
Sbjct: 343 LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAAN 402

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            + EEM++D +  D  TY T IDG CK G +  A+E+ + +      LD   Y  LI GL
Sbjct: 403 DIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGL 462

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
            K+GR   A  +   +    L  D  TY ++I   C +G +        +M+     P +
Sbjct: 463 SKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGI 522

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + +  +++GF  + +      LL+ M    V P+    ++++D
Sbjct: 523 VTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLD 565



 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 164/331 (49%), Gaps = 3/331 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VT+NT++ G+CK   ++ A AL   M    I PDV TY + I GLC      +A  
Sbjct: 274 QPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAME 333

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F EM ++G+ P+ V    ++D  CK G +     L   M  R V+ +   Y+ L++GFC
Sbjct: 334 MFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFC 393

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +  A ++   M   G K D V+Y  LI+G CK  E++ A+ + +EM  +G+    V
Sbjct: 394 RVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDV 453

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L  GL +  +   A ++  EM    +  D +TY   ID  CKNG +    +  + +
Sbjct: 454 TYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEM 513

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   I  YN +++G C  G+++ A  L  ++    +  + +TYNI++ G C  G++
Sbjct: 514 QNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKV 573

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
               +L        +  +  ++ +LI+ FV+
Sbjct: 574 RDTEEL---KSAKGMVSDFGVYTSLINEFVK 601


>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Glycine max]
          Length = 729

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 195/401 (48%), Gaps = 47/401 (11%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           +N++I    + G   ++  LF  MK   ++P VVT+NSL+  L      N AK ++ EM+
Sbjct: 151 FNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEML 210

Query: 79  DQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
              GV P   T+NV++   CKN  +DE  R    M   +   +  TY+TL+DG C  GK+
Sbjct: 211 GTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKV 270

Query: 138 NRAEELFGSM--ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
             A  L   M  +  G   + V+Y  LI GYC  +EVEEAL +  EM S+G+KP ++TYN
Sbjct: 271 RIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYN 330

Query: 196 TLFLGLFEIHQ------------------------------------VEHALKLFEEMQR 219
           TL  GL E H+                                    ++ ALK+FE M++
Sbjct: 331 TLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKK 390

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQ----AYNCLIDGLC 272
             + AD+++Y+T I  LC+ G    A +LF  L    IL  +   +    +YN + + LC
Sbjct: 391 FRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLC 450

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           + G+ + A  + R L +R    D  +Y  +I G C +G  +  ++L + M      P++ 
Sbjct: 451 EHGKTKKAERVIRQLMKRG-TQDPQSYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIE 509

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           I+  LI GF++ +KP    E L KM +    P  S    V+
Sbjct: 510 IYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVL 550



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 173/343 (50%), Gaps = 13/343 (3%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G  GV   P+T TYN +I G CK   VD+    F +M+  N + DVVTYN+L+ GLC A 
Sbjct: 211 GTYGV--SPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAG 268

Query: 66  DWNEAKRLFFEMMD--QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
               A+ L   M    +G+ P+VVT+  ++   C   +++EA  +L+ M  R ++PN  T
Sbjct: 269 KVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMIT 328

Query: 124 YSTLMDGFCLTGKINRAEELFGSMES-MGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
           Y+TL+ G C   K+++ +++   M+S  G   D  ++N +I+ +C    ++EAL ++  M
Sbjct: 329 YNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESM 388

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD-------TSTYNTFIDG 235
               I     +Y+TL   L +    + A +LF+E+   ++           ++YN   + 
Sbjct: 389 KKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFES 448

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
           LC++G   +A  + R L + +   D Q+Y  +I G CK G  E   EL   + RR  + D
Sbjct: 449 LCEHGKTKKAERVIRQL-MKRGTQDPQSYTTVIMGHCKEGAYESGYELLMWMLRRDFLPD 507

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
           +  Y+ +I G     +   A +    M +++  P    + +++
Sbjct: 508 IEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVL 550



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 141/280 (50%), Gaps = 7/280 (2%)

Query: 103 DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSME--SMGC-KHDDVSY 159
            +A R      Q+       +Y  +++       +N A     S+E  S G  K +D  +
Sbjct: 92  SKALRFFKWTQQKGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFF 151

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           N LI  Y +    +E++ L++ M S  + P+VVT+N+L   L +  +   A ++++EM  
Sbjct: 152 NSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLG 211

Query: 220 D-DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
              V+ DT TYN  I G CKN  + E    FR +    C+ D+  YN L+DGLC++G++ 
Sbjct: 212 TYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVR 271

Query: 279 IALELFRSLPRRV--LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
           IA  L   + ++   L  +VVTY  +I G C   ++++A  +  +M    + PN+I + T
Sbjct: 272 IARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNT 331

Query: 337 LIHGFVRINKPSKVIELLHKMK-EKKVMPDASIVSMVVDL 375
           L+ G    +K  K+ ++L +MK +    PD    + ++ L
Sbjct: 332 LVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHL 371



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 164/369 (44%), Gaps = 51/369 (13%)

Query: 1   MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
           + NG G+      PN VTY T+I G C +  V++A  +  +M    + P+++TYN+L+ G
Sbjct: 276 LVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKG 335

Query: 61  LCHANDWNEAKRLFFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
           LC A+  ++ K +   M  D G  P   TFN I+   C  G +DEA ++ + M +  +  
Sbjct: 336 LCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPA 395

Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGS-------MESMGCKHDDVSYNILINGYCKNKEV 172
           ++ +YSTL+   C  G  + AE+LF         +   G K    SYN +    C++ + 
Sbjct: 396 DSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKT 455

Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           ++A  + R+++ +G +                                    D  +Y T 
Sbjct: 456 KKAERVIRQLMKRGTQ------------------------------------DPQSYTTV 479

Query: 233 IDGLCKNGYIVEAVELFRTLGILKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
           I G CK G      EL   + +L+ +   DI+ Y+ LIDG  +  +  +A E    + + 
Sbjct: 480 IMGHCKEGAYESGYELL--MWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKS 537

Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII---FVTLIHGFVRINKP 347
                  T++ ++  L   G   ++  + + M E  V  N+ +    + L+ G  +  + 
Sbjct: 538 SYQPKTSTWHSVLAKLLEKGCAHESSCVIVMMLEKNVRQNINLSTESLQLLFGREQHERA 597

Query: 348 SKVIELLHK 356
            ++I LL+K
Sbjct: 598 FEIINLLYK 606



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 157/378 (41%), Gaps = 76/378 (20%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN-INPDVVTYNSLIHGLCHANDWNEAK 71
           KPN +TYNT++ GLC+   +DK K +  +MK +   +PD  T+N++IH  C A + +EA 
Sbjct: 323 KPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEAL 382

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV-------RPNAFTY 124
           ++F  M    +     +++ ++  LC+ G  D A +L D + ++++       +P A +Y
Sbjct: 383 KVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASY 442

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + + +  C  GK  +AE +   +   G + D  SY  +I G+CK    E    L   M+ 
Sbjct: 443 NPIFESLCEHGKTKKAERVIRQLMKRGTQ-DPQSYTTVIMGHCKEGAYESGYELLMWMLR 501

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT------------- 231
           +   P +  Y+ L  G  +  +   A +  E+M +      TST+++             
Sbjct: 502 RDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEKGCAHE 561

Query: 232 --------------------------------------FIDGLCKNGYIVEAVELFRTL- 252
                                                  I+ L KNGY V+  E+ + L 
Sbjct: 562 SSCVIVMMLEKNVRQNINLSTESLQLLFGREQHERAFEIINLLYKNGYYVKIEEVAQFLL 621

Query: 253 --GILK--CEL-----------DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
             G L   C+L           DI   N  I  LCK  ++  A  L   L    L  ++ 
Sbjct: 622 KRGKLSEACKLLLFSLENHQNVDIDLCNATILNLCKINKVSEAFSLCYELVENGLHQELT 681

Query: 298 TYNIMIHGLCNDGQMDKA 315
             + +I  L   G+ ++A
Sbjct: 682 CLDDLIAALEEGGKREEA 699



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 104/240 (43%), Gaps = 40/240 (16%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           +Y T+I G CKEG  +    L + M   +  PD+  Y+ LI G    +    AK    +M
Sbjct: 475 SYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKM 534

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN----------------- 120
           +    QP   T++ ++ +L + G   E+S ++ +M++++VR N                 
Sbjct: 535 LKSSYQPKTSTWHSVLAKLLEKGCAHESSCVIVMMLEKNVRQNINLSTESLQLLFGREQH 594

Query: 121 --AFTYSTLM--DGFCLT-----------GKINRA-EELFGSMESMGCKHDDVSY---NI 161
             AF    L+  +G+ +            GK++ A + L  S+E+    H +V     N 
Sbjct: 595 ERAFEIINLLYKNGYYVKIEEVAQFLLKRGKLSEACKLLLFSLEN----HQNVDIDLCNA 650

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
            I   CK  +V EA SL  E+V  G+   +   + L   L E  + E A  + + + R D
Sbjct: 651 TILNLCKINKVSEAFSLCYELVENGLHQELTCLDDLIAALEEGGKREEAAFISKRLPRLD 710


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 202/440 (45%), Gaps = 71/440 (16%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G    P+    + +++  C+ G VD A  +  +M  E + P+VVTYN L++G     D+
Sbjct: 218 VGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDF 277

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL------------------ 109
              +R+   M ++GV  +VVT  ++M   CK GKMDEA +LL                  
Sbjct: 278 EGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGV 337

Query: 110 ------------------DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
                             D M++  ++ N    +TL+ G+C  G++  AE +F  M    
Sbjct: 338 LVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWN 397

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            K D  SYN L++GYC+  +V +A  L  EM+  GI PTVVTYNT+  GL ++   + AL
Sbjct: 398 LKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDAL 457

Query: 212 KLFEEMQRDDVAAD-----------------------------------TSTYNTFIDGL 236
            L+  M    V  +                                   T  +NT I GL
Sbjct: 458 HLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGL 517

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
           CK G ++EA  +F  +  L    D   Y  L DG CK+G ++ A ++   + R+ + A +
Sbjct: 518 CKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASI 577

Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
             YN +I GL    +++   DL ++M+   ++PNV+ + TLI G+    K  K   L  +
Sbjct: 578 EMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFE 637

Query: 357 MKEKKVMPDASIVSMVVDLL 376
           M E+   P+  + S +V  L
Sbjct: 638 MIERGFTPNVVVCSKIVSSL 657



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 202/431 (46%), Gaps = 70/431 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  +YNT++DG C+EG V KA  L  +M G+ I P VVTYN++I GL     +++A  
Sbjct: 399 KPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALH 458

Query: 73  LFFEMMDQGVQP-----------------------------------SVVTFNVIMDELC 97
           L+  M+++GV P                                   S V FN ++  LC
Sbjct: 459 LWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLC 518

Query: 98  KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
           K GK+ EA  + D M +  + P+  TY TL DG+C  G +  A ++ G ME         
Sbjct: 519 KMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIE 578

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            YN LI+G  K +++ +   L  EM ++G+ P VVTY TL  G  +  +++ A  L+ EM
Sbjct: 579 MYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEM 638

Query: 218 -------------------QRDDVAADTST-------------YNTFIDGLCKNGYIVEA 245
                               RDD  ++ +              +N   D L KN   +EA
Sbjct: 639 IERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEA 698

Query: 246 VELFRTLG---ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            ++  +L    I     +   YN  IDGLCKSG+L+ A  +   L  R  + D  TY  +
Sbjct: 699 QKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTL 758

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           IH     G +D+A  L  +M E  + PN+ I+  LI+G  ++    +   L +K+ +K +
Sbjct: 759 IHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGL 818

Query: 363 MPDASIVSMVV 373
           +P+A   ++++
Sbjct: 819 VPNAVTYNILI 829



 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 180/339 (53%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           Y  ++DG C+ G ++ A  +  +M    +  ++V  N+LI G C      EA+R+F  M+
Sbjct: 335 YGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMV 394

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           D  ++P   ++N ++D  C+ GK+ +A  L + M+   + P   TY+T++ G    G  +
Sbjct: 395 DWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYD 454

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A  L+  M   G   +++S   +++ + K  + + A+ L++E++ +G   + V +NT+ 
Sbjct: 455 DALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMI 514

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
            GL ++ ++  A  +F+ M+   ++ D  TY T  DG CKNG + EA ++   +      
Sbjct: 515 SGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMS 574

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
             I+ YN LIDGL K  +L    +L   +  R L  +VVTY  +I G C++ ++DKA  L
Sbjct: 575 ASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHL 634

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           + +M E    PNV++   ++    R ++ S+   +L KM
Sbjct: 635 YFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKM 673



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 156/303 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K N V  NT+I G CK G V +A+ +F+ M   N+ PD  +YN+L+ G C     ++A  
Sbjct: 364 KVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFM 423

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM+  G+ P+VVT+N ++  L   G  D+A  L  LMV+R V PN  +  T++D F 
Sbjct: 424 LCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFF 483

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G  +RA  L+  +   G     V++N +I+G CK  ++ EA +++  M   G+ P  +
Sbjct: 484 KMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEI 543

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY TL  G  +   V+ A ++   M+R  ++A    YN+ IDGL K   + +  +L   +
Sbjct: 544 TYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEM 603

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  ++  Y  LI G C   +L+ A  L+  +  R    +VV  + ++  L  D ++
Sbjct: 604 QTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRI 663

Query: 313 DKA 315
            +A
Sbjct: 664 SEA 666



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 176/353 (49%), Gaps = 1/353 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   + + ++  L ++G    A  +F Q+ G  I PDV   + +++  C     + A  +
Sbjct: 189 PGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEV 248

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M+ +G++P+VVT+N +++     G  +   R+L LM +R V  N  T + LM G+C 
Sbjct: 249 LEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCK 308

Query: 134 TGKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
            GK++ AE+L   +E       D+  Y +L++GYC+   +E+A+ +  EM+  G+K  +V
Sbjct: 309 KGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMV 368

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
             NTL  G  ++ QV  A ++F  M   ++  D  +YNT +DG C+ G + +A  L   +
Sbjct: 369 ICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEM 428

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                   +  YN +I GL   G  + AL L+  +  R +  + ++   M+      G  
Sbjct: 429 LGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDS 488

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           D+A  L+ ++       + + F T+I G  ++ K  +   +  +MKE  + PD
Sbjct: 489 DRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPD 541



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 166/342 (48%), Gaps = 5/342 (1%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           ++ ++    + G    A  +F +M      P + + + L+  L    +   A  +F +++
Sbjct: 159 FDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIV 218

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
             G+ P V   +++++  C+ G++D A  +L+ MV+  + PN  TY+ L++G+   G   
Sbjct: 219 GTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFE 278

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV---TYN 195
             E +   M   G   + V+  +L+ GYCK  +++EA  L RE+    +   VV    Y 
Sbjct: 279 GVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDEL--LVVDERVYG 336

Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
            L  G  ++ ++E A+++ +EM R  +  +    NT I G CK G + EA  +F  +   
Sbjct: 337 VLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDW 396

Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
             + D  +YN L+DG C+ G++  A  L   +    +   VVTYN +I GL + G  D A
Sbjct: 397 NLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDA 456

Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
             L+  M E  V PN I   T++  F ++    + + L  ++
Sbjct: 457 LHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEI 498



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 130/265 (49%), Gaps = 35/265 (13%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           YN++IDGL K   ++    L ++M+   ++P+VVTY +LI G C     ++A  L+FEM+
Sbjct: 580 YNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMI 639

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP------------------- 119
           ++G  P+VV  + I+  L ++ ++ EA+ +LD M+  D+                     
Sbjct: 640 ERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQ 699

Query: 120 ----------------NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILI 163
                           N   Y+  +DG C +GK++ A  +   + S G   D+ +Y  LI
Sbjct: 700 KIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLI 759

Query: 164 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVA 223
           +    +  V+EA  L  EM+ KG+ P +  YN L  GL ++  ++ A +LF ++ +  + 
Sbjct: 760 HACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLV 819

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVEL 248
            +  TYN  I   C+ G + +A  L
Sbjct: 820 PNAVTYNILIGCYCRIGDLDKASRL 844



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/382 (24%), Positives = 166/382 (43%), Gaps = 56/382 (14%)

Query: 40  LQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD---------QGVQPSVVT-- 88
           L  +  +  P  ++Y+ L+H L HA  + EA  +  ++MD           V   V +  
Sbjct: 90  LATQNSHYRPHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAYAVCNHVFSVY 149

Query: 89  ---------FNVIMDELCKNGK-------MDEASRL------------------------ 108
                    F+++M    + G         DE SR+                        
Sbjct: 150 KEFGFCSGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRV 209

Query: 109 ----LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
                D +V   + P+ +  S +++  C  G+++ A E+   M   G + + V+YN L+N
Sbjct: 210 AVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVN 269

Query: 165 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD-VA 223
           GY    + E    + R M  +G+   VVT   L  G  +  +++ A KL  E++ D+ + 
Sbjct: 270 GYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLV 329

Query: 224 ADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL 283
            D   Y   +DG C+ G + +AV +   +  +  ++++   N LI G CK G++  A  +
Sbjct: 330 VDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERV 389

Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
           F  +    L  D  +YN ++ G C +G++ KA  L  +M  + + P V+ + T+I G V 
Sbjct: 390 FVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVD 449

Query: 344 INKPSKVIELLHKMKEKKVMPD 365
           +      + L H M E+ V P+
Sbjct: 450 VGSYDDALHLWHLMVERGVTPN 471



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 35/246 (14%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY T+I G C E  +DKA  L+ +M      P+VV  + ++  L   +  +EA  +
Sbjct: 610 PNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVI 669

Query: 74  FFEMMD-----------------------QGVQPSV------------VTFNVIMDELCK 98
             +M+D                       Q +  S+            + +N+ +D LCK
Sbjct: 670 LDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCK 729

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
           +GK+DEA  +L +++ R   P+ FTY TL+    ++G ++ A +L   M   G   +   
Sbjct: 730 SGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITI 789

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN LING CK   ++ A  L+ ++  KG+ P  VTYN L      I  ++ A +L E+M 
Sbjct: 790 YNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMT 849

Query: 219 RDDVAA 224
            + ++ 
Sbjct: 850 EEGIST 855



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 79/141 (56%)

Query: 52  VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL 111
           + YN  I GLC +   +EA+ +   +M +G  P   T+  ++     +G +DEA +L D 
Sbjct: 718 IVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDE 777

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           M+++ + PN   Y+ L++G C  G I+RA+ LF  +   G   + V+YNILI  YC+  +
Sbjct: 778 MLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGD 837

Query: 172 VEEALSLYREMVSKGIKPTVV 192
           +++A  L  +M  +GI   ++
Sbjct: 838 LDKASRLREKMTEEGISTRII 858



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 46/74 (62%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN   YN +I+GLCK G +D+A+ LF ++  + + P+ VTYN LI   C   D ++A RL
Sbjct: 785 PNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRL 844

Query: 74  FFEMMDQGVQPSVV 87
             +M ++G+   ++
Sbjct: 845 REKMTEEGISTRII 858



 Score = 46.2 bits (108), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 51/256 (19%), Positives = 99/256 (38%), Gaps = 50/256 (19%)

Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
           RP++ +YS L+           A  +   +  + C ++  +Y +               S
Sbjct: 98  RPHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAYAV----------CNHVFS 147

Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
           +Y+E    G    V  ++ L     E    +HAL +F+EM R                  
Sbjct: 148 VYKEF---GFCSGV--FDMLMKAFAERGMTKHALYVFDEMSR------------------ 184

Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
                     + R  G+  C         L+  L + G   +A+ +F  +    +V DV 
Sbjct: 185 ----------IGRVPGLRSCSF-------LLGKLVQKGEGRVAVMVFDQIVGTGIVPDVY 227

Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
             +I+++  C  G++D A ++   M +  + PNV+ +  L++G+V       V  +L  M
Sbjct: 228 MCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLM 287

Query: 358 KEKKVMPDASIVSMVV 373
            E+ V  +    +M++
Sbjct: 288 SERGVSRNVVTCTMLM 303


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 196/423 (46%), Gaps = 71/423 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K     YN++I+G CK+G +D+A+ L   M  E + P   +Y+ LI GLC   D +    
Sbjct: 405 KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCME 464

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM ++G+  +  TF  +++  CK+ KMDEA+RL D M+  +V PN  T++ +++G+C
Sbjct: 465 LHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYC 524

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA----------------- 175
           L G I +A +L+  M  MG K D+ +Y  LI+G C    V +A                 
Sbjct: 525 LVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNF 584

Query: 176 ------------------LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
                               L+ EM  +G+K  +V++  +     + H  E +  LF EM
Sbjct: 585 SLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM 644

Query: 218 QRDDVAAD-----------------------------------TSTYNTFIDGLCKNGYI 242
           +   V  D                                   T T+   I+ LCK+GY+
Sbjct: 645 KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYL 704

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
             A  L + +       +   YNC +D     G +E A +L  ++ +  L A +V++NI+
Sbjct: 705 GSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHL-ASIVSFNIL 763

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I GLC  G++ +A DL   + E+  +P+ I + T+IH   ++   +K  EL ++M  K +
Sbjct: 764 IKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGL 823

Query: 363 MPD 365
            PD
Sbjct: 824 KPD 826



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 173/333 (51%), Gaps = 2/333 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G++G+V  PN   YN +ID LCK    D A  LF +M G  + P+ VTY  LIH LC   
Sbjct: 330 GDLGMV--PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG 387

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
              +A  LF +M D+G++ +V  +N +++  CK G +D A  LL  MV+  + P A +YS
Sbjct: 388 MIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYS 447

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+ G C  G ++   EL   M   G   ++ ++  LING+CK+K+++EA  L+ +M+  
Sbjct: 448 PLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDS 507

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            + P  VT+N +  G   +  +  A +L+++M    +  D  TY + I GLC    + +A
Sbjct: 508 NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKA 567

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            E    L      L+  +   L+ G  + GR      L+  +  R +  D+V++ I+++ 
Sbjct: 568 NEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYA 627

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
                  +K+  LF +M+E  V P+ I +  +I
Sbjct: 628 ALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 660



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 190/363 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+    + +ID L K+  V++A +L  ++    + P+V  YN+LI  LC    +++A RL
Sbjct: 301 PSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRL 360

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM  +G++P+ VT+ +++  LCK G +++A  L D M  + ++   + Y++L++G+C 
Sbjct: 361 FKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCK 420

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++RA  L   M   G      SY+ LI G C+N ++   + L+REM  +GI     T
Sbjct: 421 QGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYT 480

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  G  +  +++ A +LF++M   +V  +  T+N  I+G C  G I +A +L+  + 
Sbjct: 481 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 540

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  + D   Y  LI GLC +  +  A E    L     V +  +   +++G   +G+  
Sbjct: 541 EMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFT 600

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           + + L+ +M    V  +++ F  +++  ++ +   K   L  +MKE+ V PD    + ++
Sbjct: 601 ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 660

Query: 374 DLL 376
           D L
Sbjct: 661 DAL 663



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 176/346 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V YN ++ GLCK   V +A  +   M    +  D VTY +L++G C   +   A R
Sbjct: 230 KASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALR 289

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M+  G  PS    + ++DEL K   ++EA  L   +    + PN F Y+ L+D  C
Sbjct: 290 ITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLC 349

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              + + A+ LF  M   G + ++V+Y ILI+  CK   +E+AL L+ +M  KGIK TV 
Sbjct: 350 KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN+L  G  +   ++ A  L   M ++ +    ++Y+  I GLC+NG +   +EL R +
Sbjct: 410 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 469

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +   +  LI+G CK  +++ A  LF  +    ++ + VT+N+MI G C  G +
Sbjct: 470 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNI 529

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
            KA  L+  M E  + P+   + +LI G    +  SK  E +  ++
Sbjct: 530 RKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 575



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 169/353 (47%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY  +I  LCK G ++ A  LF +M+ + I   V  YNSLI+G C     + A+ 
Sbjct: 370 EPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARG 429

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+ +G+ P+  +++ ++  LC+NG +     L   M +R +  N +T++ L++GFC
Sbjct: 430 LLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFC 489

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K++ A  LF  M       ++V++N++I GYC    + +A  LY +MV  G+KP   
Sbjct: 490 KDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNY 549

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY +L  GL     V  A +   +++      +  +    + G  + G   E   L+  +
Sbjct: 550 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEM 609

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +   +LD+ ++  ++    K    E +  LFR +  + +  D + Y  MI  L  +  M
Sbjct: 610 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 669

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +A + +  M  +  +PN +    LI+   +         L  +M    V+P+
Sbjct: 670 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPN 722



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 178/360 (49%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T + I+  L K      A+ LF +M    ++ D   Y + I   C + + + A+ L 
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M  +GV+ S V +NV+M  LCKN ++ EA  + ++MV   V  +  TY TL+ GFC  
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            ++  A  +   M  +G    + + + +I+   K + VEEA SL  ++   G+ P V  Y
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L   L +  + + A +LF+EM    +  +  TY   I  LCK G I +A+ LF  +  
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              ++ +  YN LI+G CK G L+ A  L   + +  L     +Y+ +I GLC +G +  
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +L  +M E  +A N   F  LI+GF +  K  +   L  KM +  V+P+    +++++
Sbjct: 462 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 148/296 (50%)

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +  G+  +  T + I+  L K  +   A  L D M+Q  V  + + Y+  +  +C +  +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  L   MES G K   V YN+L+ G CKN  V+EA+ +   MV+ G+    VTY TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G   + ++E AL++  +M R       +  +  ID L K   + EA  L   LG L  
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             ++ AYN LID LCK+ R + A  LF+ +  R L  + VTY I+IH LC  G ++ A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           LF  M +  +   V  + +LI+G+ +     +   LL  M ++ + P A+  S ++
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 167/363 (46%), Gaps = 38/363 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC------HANDW 67
           PN VT+N +I+G C  G + KA  L+ QM    + PD  TY SLI GLC       AN++
Sbjct: 511 PNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEF 570

Query: 68  -----------------------------NEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                                         E   L+ EM  +GV+  +V+F +I+    K
Sbjct: 571 VADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALK 630

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
               +++  L   M ++ V+P+   Y+ ++D       + +A   +  M   G   + V+
Sbjct: 631 QHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVT 690

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH-QVEHALKLFEEM 217
           + +LIN  CK+  +  A  L +EM++  + P   TYN  FL  F     +E A  L   M
Sbjct: 691 HTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNC-FLDYFATEGDMEKAKDLHSAM 749

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
            +  +A+  S +N  I GLCK G I EA++L   +       D  +Y+ +I  LCK G +
Sbjct: 750 LQGHLASIVS-FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 808

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A EL+  +  + L  DVV YNI I      G+ DKA  ++ +M  + V PN   +  L
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868

Query: 338 IHG 340
           + G
Sbjct: 869 LSG 871



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 104/189 (55%), Gaps = 1/189 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PNTVT+  +I+ LCK G++  A+ L  +M   N+ P+  TYN  +       D  +AK 
Sbjct: 685 SPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKD 744

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+ QG   S+V+FN+++  LCK GK+ EA  L+  + +    P+  +YST++   C
Sbjct: 745 LHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELC 803

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G IN+A EL+  M   G K D V+YNI I     + E ++AL +Y  M+  G++P   
Sbjct: 804 KMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWD 863

Query: 193 TYNTLFLGL 201
           TY  L  G+
Sbjct: 864 TYRALLSGI 872



 Score =  120 bits (302), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 167/356 (46%), Gaps = 19/356 (5%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V++  I+    K+   +K+  LF +MK + + PD + Y  +I  L    +  +A  
Sbjct: 615 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN 674

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            + +M+  G  P+ VT  V+++ LCK+G +  A  L   M+  +V PN FTY+  +D F 
Sbjct: 675 CWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 734

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G + +A++L  +M   G     VS+NILI G CK  +++EA+ L  ++   G  P  +
Sbjct: 735 TEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCI 793

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y+T+   L ++  +  A +L+ EM    +  D   YN FI     +G   +A+ ++  +
Sbjct: 794 SYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNM 853

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + +   Y  L+ G+  S  L      FR   + + ++    Y +M      D   
Sbjct: 854 IRSGVQPNWDTYRALLSGI--SLMLHYDFSCFRGTKQYIQIS---VYELM------DSTH 902

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           +K+H     ++++     ++ F        R+NK   VI     +K KK+ P   +
Sbjct: 903 NKSHRRIWFVDDHKSGEIILEFDG------RLNK-WGVISFRSDVKVKKLSPGPQV 951



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 105/290 (36%), Gaps = 70/290 (24%)

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
           +L L +   +  N +T S ++       +   A +LF  M   G   D+  Y   I  YC
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           +++ ++ A  L   M S+G+K + V                                   
Sbjct: 210 ESRNLDGARGLVVRMESEGVKASAVP---------------------------------- 235

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
            YN  + GLCKN  + EAVE+   +  +    D   Y  L+ G C+   LE+AL +   +
Sbjct: 236 -YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDM 294

Query: 288 PR-----------------------------------RVLVADVVTYNIMIHGLCNDGQM 312
            R                                     +V +V  YN +I  LC + + 
Sbjct: 295 IRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERF 354

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           D A  LF +M    + PN + +  LIH   +       + L  KM++K +
Sbjct: 355 DDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 404


>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Glycine max]
          Length = 621

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 187/367 (50%), Gaps = 9/367 (2%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+++  N +I+     G VD+A  +F +MK     P   TYN+LI G        E+ +
Sbjct: 127 KPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMK 186

Query: 73  LFFEMM--DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           L  EMM  D+ V+P+  T+N+++   C   K++EA  +L  MV   ++P+  TY+T+   
Sbjct: 187 LL-EMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARA 245

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G+  +AE L   M+    K ++ +  I+I+GYCK   + EAL     M   G+ P 
Sbjct: 246 YAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPN 305

Query: 191 VVTYNTLFLGLF---EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
            V +N+L  G     + + V+ AL L EE     +  D  T++T ++     G +    E
Sbjct: 306 PVVFNSLIKGYLDATDTNGVDEALTLMEEF---GIKPDVVTFSTIMNAWSSAGLMDNCEE 362

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           +F  +     E DI AY+ L  G  ++G+   A  L  S+ +  +  +VV +  +I G C
Sbjct: 363 IFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWC 422

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
             G+MD+A  L   M E   +PN+  + TLI G+    +P K  E+L  M+E+ V+P+ S
Sbjct: 423 AAGKMDRAFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMS 482

Query: 368 IVSMVVD 374
            + +V D
Sbjct: 483 TMQLVAD 489



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 184/374 (49%), Gaps = 12/374 (3%)

Query: 10  VVCKPN----TVTYNT-IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           ++C+ N    TV   T +++ L  +G   +A+A+F  +  E   P ++TY +L+  L   
Sbjct: 49  LICRGNNSCQTVHARTKLMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQ 108

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
             +     L  ++ D G++P  +  N +++    +GK+DEA ++   M +   +P   TY
Sbjct: 109 KRFKSIPALLSKVADNGMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTY 168

Query: 125 STLMDGFCLTGKINRAEELFGSMESMG----CKHDDVSYNILINGYCKNKEVEEALSLYR 180
           +TL+ GF + G   R  E    +E MG     K +D +YNILI  +C  K++EEA ++  
Sbjct: 169 NTLIKGFGIVG---RPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLH 225

Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           +MV+ GI+P VVTYNT+     +  + E A +L  +MQ + V  +  T    I G CK G
Sbjct: 226 KMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEG 285

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            + EA+     +  L    +   +N LI G   +       E    +    +  DVVT++
Sbjct: 286 NMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFS 345

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +++   + G MD   ++F DM +  + P++  +  L  G+VR  +P K   LL  M + 
Sbjct: 346 TIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKY 405

Query: 361 KVMPDASIVSMVVD 374
            V  +  I + ++ 
Sbjct: 406 GVQTNVVIFTTIIS 419



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 144/314 (45%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN  TYN +I   C +  +++A  +  +M    I PDVVTYN++        +  +A+R
Sbjct: 198 KPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAER 257

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  +M    V+P+  T  +I+   CK G M EA R L  M +  V PN   +++L+ G+ 
Sbjct: 258 LILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYL 317

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                N  +E    ME  G K D V+++ ++N +     ++    ++ +MV  GI+P + 
Sbjct: 318 DATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIH 377

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y+ L  G     Q   A  L   M +  V  +   + T I G C  G +  A  L   +
Sbjct: 378 AYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKM 437

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             +    +++ Y  LI G  ++ +   A E+  ++  R +V ++ T  ++       G  
Sbjct: 438 HEMGTSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVADAWRAIGLF 497

Query: 313 DKAHDLFLDMEENA 326
            +A+ +    EE +
Sbjct: 498 KEANRILNGSEEES 511


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 196/423 (46%), Gaps = 71/423 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K     YN++I+G CK+G +D+A+ L   M  E + P   +Y+ LI GLC   D +    
Sbjct: 428 KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCME 487

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM ++G+  +  TF  +++  CK+ KMDEA+RL D M+  +V PN  T++ +++G+C
Sbjct: 488 LHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYC 547

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA----------------- 175
           L G I +A +L+  M  MG K D+ +Y  LI+G C    V +A                 
Sbjct: 548 LVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNF 607

Query: 176 ------------------LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
                               L+ EM  +G+K  +V++  +     + H  E +  LF EM
Sbjct: 608 SLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM 667

Query: 218 QRDDVAAD-----------------------------------TSTYNTFIDGLCKNGYI 242
           +   V  D                                   T T+   I+ LCK+GY+
Sbjct: 668 KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYL 727

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
             A  L + +       +   YNC +D     G +E A +L  ++ +  L A +V++NI+
Sbjct: 728 GSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHL-ASIVSFNIL 786

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I GLC  G++ +A DL   + E+  +P+ I + T+IH   ++   +K  EL ++M  K +
Sbjct: 787 IKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGL 846

Query: 363 MPD 365
            PD
Sbjct: 847 KPD 849



 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 174/338 (51%), Gaps = 2/338 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G++G+V  PN   YN +ID LCK    D A  LF +M G  + P+ VTY  LIH LC   
Sbjct: 353 GDLGMV--PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG 410

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
              +A  LF +M D+G++ +V  +N +++  CK G +D A  LL  MV+  + P A +YS
Sbjct: 411 MIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYS 470

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+ G C  G ++   EL   M   G   ++ ++  LING+CK+K+++EA  L+ +M+  
Sbjct: 471 PLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDS 530

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            + P  VT+N +  G   +  +  A +L+++M    +  D  TY + I GLC    + +A
Sbjct: 531 NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKA 590

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            E    L      L+  +   L+ G  + GR      L+  +  R +  D+V++ I+++ 
Sbjct: 591 NEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYA 650

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
                  +K+  LF +M+E  V P+ I +  +I    +
Sbjct: 651 ALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSK 688



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 190/363 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+    + +ID L K+  V++A +L  ++    + P+V  YN+LI  LC    +++A RL
Sbjct: 324 PSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRL 383

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM  +G++P+ VT+ +++  LCK G +++A  L D M  + ++   + Y++L++G+C 
Sbjct: 384 FKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCK 443

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++RA  L   M   G      SY+ LI G C+N ++   + L+REM  +GI     T
Sbjct: 444 QGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYT 503

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  G  +  +++ A +LF++M   +V  +  T+N  I+G C  G I +A +L+  + 
Sbjct: 504 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 563

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  + D   Y  LI GLC +  +  A E    L     V +  +   +++G   +G+  
Sbjct: 564 EMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFT 623

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           + + L+ +M    V  +++ F  +++  ++ +   K   L  +MKE+ V PD    + ++
Sbjct: 624 ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 683

Query: 374 DLL 376
           D L
Sbjct: 684 DAL 686



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 176/346 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V YN ++ GLCK   V +A  +   M    +  D VTY +L++G C   +   A R
Sbjct: 253 KASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALR 312

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M+  G  PS    + ++DEL K   ++EA  L   +    + PN F Y+ L+D  C
Sbjct: 313 ITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLC 372

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              + + A+ LF  M   G + ++V+Y ILI+  CK   +E+AL L+ +M  KGIK TV 
Sbjct: 373 KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 432

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN+L  G  +   ++ A  L   M ++ +    ++Y+  I GLC+NG +   +EL R +
Sbjct: 433 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 492

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +   +  LI+G CK  +++ A  LF  +    ++ + VT+N+MI G C  G +
Sbjct: 493 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNI 552

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
            KA  L+  M E  + P+   + +LI G    +  SK  E +  ++
Sbjct: 553 RKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 598



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 169/353 (47%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY  +I  LCK G ++ A  LF +M+ + I   V  YNSLI+G C     + A+ 
Sbjct: 393 EPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARG 452

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+ +G+ P+  +++ ++  LC+NG +     L   M +R +  N +T++ L++GFC
Sbjct: 453 LLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFC 512

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K++ A  LF  M       ++V++N++I GYC    + +A  LY +MV  G+KP   
Sbjct: 513 KDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNY 572

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY +L  GL     V  A +   +++      +  +    + G  + G   E   L+  +
Sbjct: 573 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEM 632

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +   +LD+ ++  ++    K    E +  LFR +  + +  D + Y  MI  L  +  M
Sbjct: 633 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 692

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +A + +  M  +  +PN +    LI+   +         L  +M    V+P+
Sbjct: 693 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPN 745



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 178/360 (49%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T + I+  L K      A+ LF +M    ++ D   Y + I   C + + + A+ L 
Sbjct: 185 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 244

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M  +GV+ S V +NV+M  LCKN ++ EA  + ++MV   V  +  TY TL+ GFC  
Sbjct: 245 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 304

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            ++  A  +   M  +G    + + + +I+   K + VEEA SL  ++   G+ P V  Y
Sbjct: 305 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 364

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L   L +  + + A +LF+EM    +  +  TY   I  LCK G I +A+ LF  +  
Sbjct: 365 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 424

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              ++ +  YN LI+G CK G L+ A  L   + +  L     +Y+ +I GLC +G +  
Sbjct: 425 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 484

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +L  +M E  +A N   F  LI+GF +  K  +   L  KM +  V+P+    +++++
Sbjct: 485 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 544



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 148/296 (50%)

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +  G+  +  T + I+  L K  +   A  L D M+Q  V  + + Y+  +  +C +  +
Sbjct: 178 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 237

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  L   MES G K   V YN+L+ G CKN  V+EA+ +   MV+ G+    VTY TL
Sbjct: 238 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 297

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G   + ++E AL++  +M R       +  +  ID L K   + EA  L   LG L  
Sbjct: 298 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 357

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             ++ AYN LID LCK+ R + A  LF+ +  R L  + VTY I+IH LC  G ++ A  
Sbjct: 358 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 417

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           LF  M +  +   V  + +LI+G+ +     +   LL  M ++ + P A+  S ++
Sbjct: 418 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 473



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 167/363 (46%), Gaps = 38/363 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC------HANDW 67
           PN VT+N +I+G C  G + KA  L+ QM    + PD  TY SLI GLC       AN++
Sbjct: 534 PNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEF 593

Query: 68  -----------------------------NEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                                         E   L+ EM  +GV+  +V+F +I+    K
Sbjct: 594 VADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALK 653

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
               +++  L   M ++ V+P+   Y+ ++D       + +A   +  M   G   + V+
Sbjct: 654 QHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVT 713

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH-QVEHALKLFEEM 217
           + +LIN  CK+  +  A  L +EM++  + P   TYN  FL  F     +E A  L   M
Sbjct: 714 HTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNC-FLDYFATEGDMEKAKDLHSAM 772

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
            +  +A+  S +N  I GLCK G I EA++L   +       D  +Y+ +I  LCK G +
Sbjct: 773 LQGHLASIVS-FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 831

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A EL+  +  + L  DVV YNI I      G+ DKA  ++ +M  + V PN   +  L
Sbjct: 832 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 891

Query: 338 IHG 340
           + G
Sbjct: 892 LSG 894



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 104/189 (55%), Gaps = 1/189 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PNTVT+  +I+ LCK G++  A+ L  +M   N+ P+  TYN  +       D  +AK 
Sbjct: 708 SPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKD 767

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+ QG   S+V+FN+++  LCK GK+ EA  L+  + +    P+  +YST++   C
Sbjct: 768 LHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELC 826

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G IN+A EL+  M   G K D V+YNI I     + E ++AL +Y  M+  G++P   
Sbjct: 827 KMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWD 886

Query: 193 TYNTLFLGL 201
           TY  L  G+
Sbjct: 887 TYRALLSGI 895



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 131/259 (50%), Gaps = 1/259 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V++  I+    K+   +K+  LF +MK + + PD + Y  +I  L    +  +A  
Sbjct: 638 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN 697

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            + +M+  G  P+ VT  V+++ LCK+G +  A  L   M+  +V PN FTY+  +D F 
Sbjct: 698 CWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 757

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G + +A++L  +M   G     VS+NILI G CK  +++EA+ L  ++   G  P  +
Sbjct: 758 TEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCI 816

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y+T+   L ++  +  A +L+ EM    +  D   YN FI     +G   +A+ ++  +
Sbjct: 817 SYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNM 876

Query: 253 GILKCELDIQAYNCLIDGL 271
                + +   Y  L+ G+
Sbjct: 877 IRSGVQPNWDTYRALLSGI 895



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 144/292 (49%), Gaps = 1/292 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  +   ++ G  +EG   +   L+ +M    +  D+V++  +++     +D  ++  LF
Sbjct: 605 NNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLF 664

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM +QGV+P  + +  ++D L K   M +A    D MV     PN  T++ L++  C +
Sbjct: 665 REMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKS 724

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +  AE L   M +     +  +YN  ++ +    ++E+A  L+  M+ +G   ++V++
Sbjct: 725 GYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSF 783

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L  GL +  +++ A+ L  ++     + D  +Y+T I  LCK G I +A EL+  +  
Sbjct: 784 NILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLY 843

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
              + D+ AYN  I      G  + AL ++ ++ R  +  +  TY  ++ G+
Sbjct: 844 KGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 895



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 70/117 (59%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V++N +I GLCK G + +A  L  ++     +PD ++Y+++IH LC   D N+A  L+ E
Sbjct: 781 VSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNE 840

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           M+ +G++P VV +N+ +     +G+ D+A  +   M++  V+PN  TY  L+ G  L
Sbjct: 841 MLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 897



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 105/290 (36%), Gaps = 70/290 (24%)

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
           +L L +   +  N +T S ++       +   A +LF  M   G   D+  Y   I  YC
Sbjct: 173 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 232

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           +++ ++ A  L   M S+G+K + V                                   
Sbjct: 233 ESRNLDGARGLVVRMESEGVKASAVP---------------------------------- 258

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
            YN  + GLCKN  + EAVE+   +  +    D   Y  L+ G C+   LE+AL +   +
Sbjct: 259 -YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDM 317

Query: 288 PR-----------------------------------RVLVADVVTYNIMIHGLCNDGQM 312
            R                                     +V +V  YN +I  LC + + 
Sbjct: 318 IRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERF 377

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           D A  LF +M    + PN + +  LIH   +       + L  KM++K +
Sbjct: 378 DDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 427


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 203/425 (47%), Gaps = 62/425 (14%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V YNTI+   C+EG  D ++ +  +M+ E + PD+VT+NS I  LC      +A R+
Sbjct: 215 PNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRI 274

Query: 74  FFEM-MDQGV---QPSVVTFNVIMDELCK------------------------------- 98
           F +M +D+ +   +P+ +T+N+++   CK                               
Sbjct: 275 FSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQ 334

Query: 99  ----NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
               +GK  EA  +L  M  + + P+ ++Y+ LMDG C  G ++ A+ + G M+  G   
Sbjct: 335 GLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCP 394

Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
           D V+Y  L++GYC   +V+ A SL +EM+     P   T N L   L+++ ++  A +L 
Sbjct: 395 DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELL 454

Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR--------TLGIL----------- 255
            +M       DT T N  +DGLC +G + +A+E+ +         LG L           
Sbjct: 455 RKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDS 514

Query: 256 ----KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
                C  D+  Y+ L++GLCK+GR   A  LF  +    L  D V YNI IH  C  G+
Sbjct: 515 LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGK 574

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
           +  A  +  DME+     ++  + +LI G    N+  ++  L+ +MKEK + P+    + 
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNT 634

Query: 372 VVDLL 376
            +  L
Sbjct: 635 AIQYL 639



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 189/368 (51%), Gaps = 4/368 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+   YN +++   KE  V+    L+  M    I P   T+N LI  LC ++  + A+ 
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM ++G +P+  TF +++   CK G  D+   LL+ M    V PN   Y+T++  FC
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK---GI-K 188
             G+ + +E++   M   G   D V++N  I+  CK  +V +A  ++ +M      G+ +
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P  +TYN +  G  ++  +E A  LFE ++ +D  A   +YN ++ GL ++G  +EA  +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
            + +        I +YN L+DGLCK G L  A  +   + R  +  D VTY  ++HG C+
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G++D A  L  +M  N   PN      L+H   ++ + S+  ELL KM EK    D   
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468

Query: 369 VSMVVDLL 376
            +++VD L
Sbjct: 469 CNIIVDGL 476



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 194/386 (50%), Gaps = 35/386 (9%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CKPN  T+  ++ G CK G  DK   L   M+   + P+ V YN+++   C     ++++
Sbjct: 178 CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSE 237

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV----RPNAFTYSTL 127
           ++  +M ++G+ P +VTFN  +  LCK GK+ +ASR+   M   +     RPN+ TY+ +
Sbjct: 238 KMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLM 297

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDV----SYNILINGYCKNKEVEEALSLYREMV 183
           + GFC  G +  A+ LF S+     ++DD+    SYNI + G  ++ +  EA ++ ++M 
Sbjct: 298 LKGFCKVGLLEDAKTLFESIR----ENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMT 353

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
            KGI P++ +YN L  GL ++  +  A  +   M+R+ V  D  TY   + G C  G + 
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVD 413

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
            A  L + +    C  +    N L+  L K GR+  A EL R +  +    D VT NI++
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473

Query: 304 HGLCNDGQMDKAHDLFLDME-----------------------ENAVAPNVIIFVTLIHG 340
            GLC  G++DKA ++   M                        EN   P++I + TL++G
Sbjct: 474 DGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNG 533

Query: 341 FVRINKPSKVIELLHKMKEKKVMPDA 366
             +  + ++   L  +M  +K+ PD+
Sbjct: 534 LCKAGRFAEAKNLFAEMMGEKLQPDS 559



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 188/376 (50%), Gaps = 23/376 (6%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN++TYN ++ G CK G ++ AK LF  ++  +    + +YN  + GL     + EA+ 
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M D+G+ PS+ ++N++MD LCK G + +A  ++ LM +  V P+A TY  L+ G+C
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK++ A+ L   M    C  +  + NIL++   K   + EA  L R+M  KG     V
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAA-----------------------DTSTY 229
           T N +  GL    +++ A+++ + M+    AA                       D  TY
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           +T ++GLCK G   EA  LF  +   K + D  AYN  I   CK G++  A  + + + +
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
           +     + TYN +I GL    Q+ + H L  +M+E  ++PN+  + T I       K   
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVED 647

Query: 350 VIELLHKMKEKKVMPD 365
              LL +M +K + P+
Sbjct: 648 ATNLLDEMMQKNIAPN 663



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 188/389 (48%), Gaps = 25/389 (6%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC P+ VTY  ++ G C  G VD AK+L  +M   N  P+  T N L+H L      +EA
Sbjct: 392 VC-PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEA 450

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL--------------------- 109
           + L  +M ++G     VT N+I+D LC +G++D+A  ++                     
Sbjct: 451 EELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGL 510

Query: 110 --DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
             D +++ +  P+  TYSTL++G C  G+   A+ LF  M     + D V+YNI I+ +C
Sbjct: 511 VDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFC 570

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           K  ++  A  + ++M  KG   ++ TYN+L LGL   +Q+     L +EM+   ++ +  
Sbjct: 571 KQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNIC 630

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
           TYNT I  LC+   + +A  L   +       ++ ++  LI+  CK    ++A E+F + 
Sbjct: 631 TYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFET- 689

Query: 288 PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
              +       Y++M + L   GQ+ KA +L   + +        ++  L+    + ++ 
Sbjct: 690 AVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDEL 749

Query: 348 SKVIELLHKMKEKKVMPDASIVSMVVDLL 376
                +LHKM ++    D + +  V+D L
Sbjct: 750 EVASGILHKMIDRGYGFDPAALMPVIDGL 778



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 156/348 (44%), Gaps = 32/348 (9%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMK-----------------------GENINPDV 51
           +TVT N I+DGLC  G +DKA  +   M+                         N  PD+
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDL 524

Query: 52  VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL 111
           +TY++L++GLC A  + EAK LF EMM + +QP  V +N+ +   CK GK+  A R+L  
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKD 584

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           M ++    +  TY++L+ G  +  +I     L   M+  G   +  +YN  I   C+ ++
Sbjct: 585 MEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEK 644

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
           VE+A +L  EM+ K I P V ++  L     ++   + A ++F E            Y+ 
Sbjct: 645 VEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSL 703

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
             + L   G +++A EL   +     EL    Y  L++ LCK   LE+A  +   +  R 
Sbjct: 704 MFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRG 763

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE--------NAVAPNV 331
              D      +I GL   G   +A+     M E        N V PN 
Sbjct: 764 YGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDPNA 811



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 132/285 (46%), Gaps = 44/285 (15%)

Query: 4   GNGEIGVV--------CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYN 55
           GN  IG+V        C P+ +TY+T+++GLCK G   +AK LF +M GE + PD V YN
Sbjct: 504 GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYN 563

Query: 56  SLIHGLCHANDWNEAKR-----------------------------------LFFEMMDQ 80
             IH  C     + A R                                   L  EM ++
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRA 140
           G+ P++ T+N  +  LC+  K+++A+ LLD M+Q+++ PN F++  L++ FC     + A
Sbjct: 624 GISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMA 683

Query: 141 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
           +E+F +  S+ C   +  Y+++ N      ++ +A  L   ++ +G +     Y  L   
Sbjct: 684 QEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVES 742

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           L +  ++E A  +  +M       D +     IDGL K G   EA
Sbjct: 743 LCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEA 787


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 183/340 (53%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN          LC+     +A  ++L+M  + +  ++ T N+LIHGLC   +   A  
Sbjct: 439 KPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATE 498

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M+++G++   +T+N+++   CK+ K++EA +L D M+++  +P+A+ +++++  +C
Sbjct: 499 VLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYC 558

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK+  A  L G M+  G + D VSY  +I+GYCK K++++A     E+++ G+KP  V
Sbjct: 559 DLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAV 618

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN L  G      +  A+ + + M+   +     TY + +  +C  G + EA  +F   
Sbjct: 619 IYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQS 678

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                E+ +  Y  +I GLCK G+++ A+  F  +  R +  + +TY  +++  C  G  
Sbjct: 679 RKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNN 738

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
           ++A  LF +M  + + P+ + + TL+ GF +++   K IE
Sbjct: 739 EEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIE 778



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 185/366 (50%), Gaps = 1/366 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G+      V YN ++D LCK G VD+A  L  +M+   + P +VT+  LI+GL  ++ + 
Sbjct: 259 GLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFG 318

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           E   L  EM   G+ P+ V  N ++D  C+ G   EA RL D MV ++++  A TY+ + 
Sbjct: 319 EVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIA 378

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC-KNKEVEEALSLYREMVSKGI 187
              C  G++ RAE +   M S G       +N ++ G   +   +E  + L  EMV +G+
Sbjct: 379 RALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGM 438

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           KP           L +  + + A+ ++ +M    +  + +T N  I GLC+   +  A E
Sbjct: 439 KPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATE 498

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           + RT+     ELD   YN +I G CK  ++E AL+L   + R+    D   +N +IH  C
Sbjct: 499 VLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYC 558

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           + G+M++A  L   M+   V P+V+ + T+I G+ +     K  E L+++    + P+A 
Sbjct: 559 DLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAV 618

Query: 368 IVSMVV 373
           I + ++
Sbjct: 619 IYNALI 624



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 187/391 (47%), Gaps = 40/391 (10%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK- 71
           K   VTYN I   LCKEG +++A+ +  +M    +      +NS++ GL       E+  
Sbjct: 368 KSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVV 427

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RL  EM+ +G++P+         +LC+  +  EA  +   M+++ +  N  T + L+ G 
Sbjct: 428 RLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGL 487

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    +  A E+  +M + G + D+++YNI+I G CK+ ++EEAL L  +M+ KG KP  
Sbjct: 488 CEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDA 547

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             +N++     ++ ++E AL L  +M+ + V  D  +Y T IDG CK   I +A E    
Sbjct: 548 YMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNE 607

Query: 252 LGILKCELDIQA--YNCLIDG-----------------------------------LCKS 274
           L  + C L   A  YN LI G                                   +C +
Sbjct: 608 L--MACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHA 665

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
           G ++ A  +F    +  +   VV Y IMI GLC  G+MD+A + F +M   ++ PN I +
Sbjct: 666 GLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITY 725

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            TL++ + +     +  +L  +M    ++PD
Sbjct: 726 TTLMYAYCKSGNNEEASKLFDEMVSSGIVPD 756



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 194/400 (48%), Gaps = 39/400 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKG-ENINPDVVTYNSLIHGLCHANDWNEAKR 72
           P+  T N +++ L + G +     +F +M+  + + P+  +Y S+I  LC     ++  +
Sbjct: 191 PSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFK 250

Query: 73  LFFEMMDQGVQPSV--VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           +  +++  G+Q S   V +N++MD LCK+G++DEA RL   M +  V P+  T+  L++G
Sbjct: 251 ILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILING 310

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
              + +      L   ME +G   ++V  N LI+ +C+     EA+ L+ EMVSK +K T
Sbjct: 311 LKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKST 370

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL-------------- 236
            VTYN +   L +  ++E A ++ EEM    +   +  +N+ + GL              
Sbjct: 371 AVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLI 430

Query: 237 ----------------------CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
                                 C+     EAV ++  +      ++I   N LI GLC+ 
Sbjct: 431 SEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEG 490

Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
             ++ A E+ R++  + +  D +TYNIMI G C D ++++A  L  DM      P+  +F
Sbjct: 491 KNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMF 550

Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            ++IH +  + K  + + LL +MK + V PD      ++D
Sbjct: 551 NSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIID 590



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/172 (37%), Positives = 95/172 (55%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN V YN +I G  + G +  A  +   M+   I P  VTY SL+H +CHA   +EAK 
Sbjct: 614 KPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKT 673

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +     ++  VV + +++  LCK GKMDEA    + M  R + PN  TY+TLM  +C
Sbjct: 674 MFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYC 733

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
            +G    A +LF  M S G   D+VSYN L+ G+ +   +++A+    E+ S
Sbjct: 734 KSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEISS 785



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 106/206 (51%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ V+Y TIIDG CK   + KA     ++    + P+ V YN+LI G     + + A  
Sbjct: 579 QPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIG 638

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +   M   G+QP+ VT+  +M  +C  G +DEA  + +   +  +      Y+ ++ G C
Sbjct: 639 VLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLC 698

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK++ A   F  M S     + ++Y  L+  YCK+   EEA  L+ EMVS GI P  V
Sbjct: 699 KIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNV 758

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQ 218
           +YNTL  G  ++  ++ A++   E+ 
Sbjct: 759 SYNTLVTGFSQVDSLDKAIEKAAEIS 784



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 10/227 (4%)

Query: 158 SYNILINGYCKNKEVEEALSL----YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
           S ++LIN  C       +L L    +  + S+   P+V T N L   L     +    K+
Sbjct: 157 SSDLLIN-TCVTSSARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKV 215

Query: 214 FEEMQRD--DVAADTSTYNTFIDGLCKNGYIVEAVELFRTL--GILKCELDIQAYNCLID 269
           F+EM RD   V  +  +Y + I  LCK G + +  ++   L    L+       YN L+D
Sbjct: 216 FDEM-RDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMD 274

Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
            LCKSGR++ A+ L   +    +   +VT+ I+I+GL    +  +   L  +ME   + P
Sbjct: 275 ALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITP 334

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           N +I   LI    R    ++ I L  +M  K++   A   +++   L
Sbjct: 335 NEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARAL 381


>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
 gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
          Length = 321

 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 161/296 (54%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M ++G  P+VVTF +++D LCK  ++ +A  L+++M +R   PNA  ++ +MD  C  G+
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
              A     +M SMG     V+YNILI+G+CK +++  AL + +EM  +G +P  VTYNT
Sbjct: 61  SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
              GL +  +V+ AL LF  M    +  D   Y T IDGLC+ G + EA  L   +    
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
           C      YN ++  LCK  R+  A +LF+ +    ++ D +T+ +M+ G C   ++D A 
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDAL 240

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            L   M+   +AP  +I+ TLI    R  + S+   LL +M  + + P++   +++
Sbjct: 241 LLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 83/241 (34%), Positives = 129/241 (53%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN + +N I+D LCKEG   +A      M+   ++P +VTYN LI G C     + A 
Sbjct: 41  CFPNALVFNGIMDALCKEGRSAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRAL 100

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +  EM  +G +P+ VT+N  +  LCK GK+D+A  L   M ++ +R + + Y+TL+DG 
Sbjct: 101 EILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGL 160

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK+  A  L   ME+ GC      YN +++  CK   + EA  L++ M   GI P  
Sbjct: 161 CQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDW 220

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +T+  +  G    H+++ AL L ++M+   +A     YNT ID L + G + EA  L + 
Sbjct: 221 LTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQE 280

Query: 252 L 252
           +
Sbjct: 281 M 281



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 98/285 (34%), Positives = 149/285 (52%), Gaps = 6/285 (2%)

Query: 49  PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
           P VVT+  L+ GLC AN   +A  L   M ++G  P+ + FN IMD LCK G+  EA   
Sbjct: 8   PTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGY 67

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
           ++ M    V P   TY+ L+DGFC   K++RA E+   M   G + + V+YN  ++G CK
Sbjct: 68  IETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCK 127

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
             +V++AL+L+R M  K I+  V  Y TL  GL +  ++  A  L +EM+          
Sbjct: 128 YGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGC 187

Query: 229 YNTFIDGLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
           YN  +  LCK   I EA +LF+ +   GIL    D   +  ++ G C+  R++ AL L +
Sbjct: 188 YNAILSWLCKGSRINEAHKLFKRMTGSGILP---DWLTFGMMVFGYCRGHRIDDALLLLQ 244

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
            +    L    V YN +I  L   G++ +A+ L  +M    ++PN
Sbjct: 245 QMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPN 289



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 135/265 (50%)

Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
           M ++   P   T+  L+DG C   ++  A EL   M   GC  + + +N +++  CK   
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60

Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
             EA      M S G+ PT+VTYN L  G  +  ++  AL++ +EM       +  TYNT
Sbjct: 61  SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
           F+ GLCK G + +A+ LFR +   K  LD+  Y  LIDGLC++G+L  A  L   +    
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180

Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
            V     YN ++  LC   ++++AH LF  M  + + P+ + F  ++ G+ R ++    +
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDAL 240

Query: 352 ELLHKMKEKKVMPDASIVSMVVDLL 376
            LL +MK   + P   I + ++D L
Sbjct: 241 LLLQQMKSAGLAPREVIYNTLIDAL 265



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 117/216 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  VTYN +IDG CKE  + +A  +  +M G    P+ VTYN+ +HGLC     ++A  L
Sbjct: 78  PTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALAL 137

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M ++ ++  V  +  ++D LC+ GK+ EA  LLD M      P    Y+ ++   C 
Sbjct: 138 FRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCK 197

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             +IN A +LF  M   G   D +++ +++ GYC+   +++AL L ++M S G+ P  V 
Sbjct: 198 GSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVI 257

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
           YNTL   L    +V  A +L +EM    ++ ++ TY
Sbjct: 258 YNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTY 293


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 195/423 (46%), Gaps = 71/423 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K     YN++I+G CK+G +D+A+ L   M  E + P   +Y+ LI GLC   D +    
Sbjct: 405 KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCME 464

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L  EM ++G+  +  TF  +++  CK+ KMDEA+RL D M+  +V PN  T++ +++G+C
Sbjct: 465 LHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYC 524

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYC------------------------- 167
           L G I +A +L+  M  MG K D+ +Y  LI+G C                         
Sbjct: 525 LVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNF 584

Query: 168 ----------KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
                     +     E   L+ EM  +G+K  +V++  +     + H  E +  LF EM
Sbjct: 585 SLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM 644

Query: 218 QRDDVAAD-----------------------------------TSTYNTFIDGLCKNGYI 242
           +   V  D                                   T T+   I+ LCK+GY+
Sbjct: 645 KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYL 704

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
             A  L + +       +   YNC +D     G +E A +L  ++ +  L A +V++NI+
Sbjct: 705 GSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHL-ASIVSFNIL 763

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I GLC  G++ +A DL   + E+  +P+ I + T+IH   ++   +K  EL ++M  K +
Sbjct: 764 IKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGL 823

Query: 363 MPD 365
            PD
Sbjct: 824 KPD 826



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 173/333 (51%), Gaps = 2/333 (0%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           G++G+V  PN   YN +ID LCK    D A  LF +M G  + P+ VTY  LIH LC   
Sbjct: 330 GDLGMV--PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG 387

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
              +A  LF +M D+G++ +V  +N +++  CK G +D A  LL  MV+  + P A +YS
Sbjct: 388 MIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYS 447

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
            L+ G C  G ++   EL   M   G   ++ ++  LING+CK+K+++EA  L+ +M+  
Sbjct: 448 PLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDS 507

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            + P  VT+N +  G   +  +  A +L+++M    +  D  TY + I GLC    + +A
Sbjct: 508 NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKA 567

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
            E    L      L+  +   L+ G  + GR      L+  +  R +  D+V++ I+++ 
Sbjct: 568 NEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYA 627

Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
                  +K+  LF +M+E  V P+ I +  +I
Sbjct: 628 ALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 660



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 190/363 (52%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+    + +ID L K+  V++A +L  ++    + P+V  YN+LI  LC    +++A RL
Sbjct: 301 PSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRL 360

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM  +G++P+ VT+ +++  LCK G +++A  L D M  + ++   + Y++L++G+C 
Sbjct: 361 FKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCK 420

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G ++RA  L   M   G      SY+ LI G C+N ++   + L+REM  +GI     T
Sbjct: 421 QGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYT 480

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +  L  G  +  +++ A +LF++M   +V  +  T+N  I+G C  G I +A +L+  + 
Sbjct: 481 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 540

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +  + D   Y  LI GLC +  +  A E    L     V +  +   +++G   +G+  
Sbjct: 541 EMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFT 600

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           + + L+ +M    V  +++ F  +++  ++ +   K   L  +MKE+ V PD    + ++
Sbjct: 601 ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 660

Query: 374 DLL 376
           D L
Sbjct: 661 DAL 663



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 174/342 (50%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V YN ++ GLCK   V +A  +   M    +  D VTY +L++G C   +   A R
Sbjct: 230 KASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALR 289

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  +M+  G  PS    + ++DEL K   ++EA  L   +    + PN F Y+ L+D  C
Sbjct: 290 ITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLC 349

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              + + A+ LF  M   G + ++V+Y ILI+  CK   +E+AL L+ +M  KGIK TV 
Sbjct: 350 KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN+L  G  +   ++ A  L   M ++ +    ++Y+  I GLC+NG +   +EL R +
Sbjct: 410 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 469

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                  +   +  LI+G CK  +++ A  LF  +    ++ + VT+N+MI G C  G +
Sbjct: 470 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNI 529

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
            KA  L+  M E  + P+   + +LI G    +  SK  E +
Sbjct: 530 RKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFV 571



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 169/353 (47%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN VTY  +I  LCK G ++ A  LF +M+ + I   V  YNSLI+G C     + A+ 
Sbjct: 370 EPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARG 429

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L   M+ +G+ P+  +++ ++  LC+NG +     L   M +R +  N +T++ L++GFC
Sbjct: 430 LLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFC 489

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
              K++ A  LF  M       ++V++N++I GYC    + +A  LY +MV  G+KP   
Sbjct: 490 KDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNY 549

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY +L  GL     V  A +   +++      +  +    + G  + G   E   L+  +
Sbjct: 550 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEM 609

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +   +LD+ ++  ++    K    E +  LFR +  + +  D + Y  MI  L  +  M
Sbjct: 610 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 669

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +A + +  M  +  +PN +    LI+   +         L  +M    V+P+
Sbjct: 670 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPN 722



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 178/360 (49%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  T + I+  L K      A+ LF +M    ++ D   Y + I   C + + + A+ L 
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M  +GV+ S V +NV+M  LCKN ++ EA  + ++MV   V  +  TY TL+ GFC  
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            ++  A  +   M  +G    + + + +I+   K + VEEA SL  ++   G+ P V  Y
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L   L +  + + A +LF+EM    +  +  TY   I  LCK G I +A+ LF  +  
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
              ++ +  YN LI+G CK G L+ A  L   + +  L     +Y+ +I GLC +G +  
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
             +L  +M E  +A N   F  LI+GF +  K  +   L  KM +  V+P+    +++++
Sbjct: 462 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 148/296 (50%)

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
           +  G+  +  T + I+  L K  +   A  L D M+Q  V  + + Y+  +  +C +  +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
           + A  L   MES G K   V YN+L+ G CKN  V+EA+ +   MV+ G+    VTY TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
             G   + ++E AL++  +M R       +  +  ID L K   + EA  L   LG L  
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
             ++ AYN LID LCK+ R + A  LF+ +  R L  + VTY I+IH LC  G ++ A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           LF  M +  +   V  + +LI+G+ +     +   LL  M ++ + P A+  S ++
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 167/363 (46%), Gaps = 38/363 (10%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC------HANDW 67
           PN VT+N +I+G C  G + KA  L+ QM    + PD  TY SLI GLC       AN++
Sbjct: 511 PNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEF 570

Query: 68  -----------------------------NEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                                         E   L+ EM  +GV+  +V+F +I+    K
Sbjct: 571 VADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALK 630

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
               +++  L   M ++ V+P+   Y+ ++D       + +A   +  M   G   + V+
Sbjct: 631 QHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVT 690

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH-QVEHALKLFEEM 217
           + +LIN  CK+  +  A  L +EM++  + P   TYN  FL  F     +E A  L   M
Sbjct: 691 HTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNC-FLDYFATEGDMEKAKDLHSAM 749

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
            +  +A+  S +N  I GLCK G I EA++L   +       D  +Y+ +I  LCK G +
Sbjct: 750 LQGHLASIVS-FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 808

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A EL+  +  + L  DVV YNI I      G+ DKA  ++ +M  + V PN   +  L
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868

Query: 338 IHG 340
           + G
Sbjct: 869 LSG 871



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 104/188 (55%), Gaps = 1/188 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNTVT+  +I+ LCK G++  A+ L  +M   N+ P+  TYN  +       D  +AK L
Sbjct: 686 PNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDL 745

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M+ QG   S+V+FN+++  LCK GK+ EA  L+  + +    P+  +YST++   C 
Sbjct: 746 HSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCK 804

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G IN+A EL+  M   G K D V+YNI I     + E ++AL +Y  M+  G++P   T
Sbjct: 805 MGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDT 864

Query: 194 YNTLFLGL 201
           Y  L  G+
Sbjct: 865 YRALLSGI 872



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 167/356 (46%), Gaps = 19/356 (5%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V++  I+    K+   +K+  LF +MK + + PD + Y  +I  L    +  +A  
Sbjct: 615 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN 674

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
            + +M+  G  P+ VT  V+++ LCK+G +  A  L   M+  +V PN FTY+  +D F 
Sbjct: 675 CWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 734

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G + +A++L  +M   G     VS+NILI G CK  +++EA+ L  ++   G  P  +
Sbjct: 735 TEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCI 793

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y+T+   L ++  +  A +L+ EM    +  D   YN FI     +G   +A+ ++  +
Sbjct: 794 SYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNM 853

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                + +   Y  L+ G+  S  L      FR   + + ++    Y +M      D   
Sbjct: 854 IRSGVQPNWDTYRALLSGI--SLMLHYDFSCFRGTKQYIQIS---VYELM------DSTH 902

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           +K+H     ++++     ++ F        R+NK   VI     +K KK+ P   +
Sbjct: 903 NKSHRRIWFVDDHKSGEIILEFDG------RLNKWG-VISFRSDVKVKKLSPGPQV 951



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 105/290 (36%), Gaps = 70/290 (24%)

Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
           +L L +   +  N +T S ++       +   A +LF  M   G   D+  Y   I  YC
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209

Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
           +++ ++ A  L   M S+G+K + V                                   
Sbjct: 210 ESRNLDGARGLVVRMESEGVKASAVP---------------------------------- 235

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL 287
            YN  + GLCKN  + EAVE+   +  +    D   Y  L+ G C+   LE+AL +   +
Sbjct: 236 -YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDM 294

Query: 288 PR-----------------------------------RVLVADVVTYNIMIHGLCNDGQM 312
            R                                     +V +V  YN +I  LC + + 
Sbjct: 295 IRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERF 354

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           D A  LF +M    + PN + +  LIH   +       + L  KM++K +
Sbjct: 355 DDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 404


>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Cucumis sativus]
          Length = 637

 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/408 (31%), Positives = 194/408 (47%), Gaps = 43/408 (10%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDW 67
           G  C P    YNT+I  L  EG  +K   L+ ++  E N +PD +TY++LI        +
Sbjct: 187 GRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERY 246

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           + A RLF EM + G+ P+   +  I+    K  K++ A RL++ M  +   P  FTY+ L
Sbjct: 247 DFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTEL 306

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G    G+++ A  LF +M   GCK D V  N LIN   +   +E+AL L+ +M S   
Sbjct: 307 IKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQC 366

Query: 188 KPTVVTYNTLFLGLFEIHQ-VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            P VVTYNT+   +FE       A   FE+M+ + +A  + TY   IDG CK   + +A+
Sbjct: 367 APNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKAL 426

Query: 247 ELFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR-------RVLV--- 293
            L   +   G   C     AY  LID L ++ R E A ELF+ L         RV     
Sbjct: 427 LLLEEMDEKGFPPCP---AAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMI 483

Query: 294 -------------------------ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVA 328
                                     DV TYN ++ G+   G +D+AH L  +M EN   
Sbjct: 484 KHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCT 543

Query: 329 PNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           P++     +++G  +   P + IE+  KMKE ++MPDA   + ++  L
Sbjct: 544 PDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCL 591



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 178/362 (49%), Gaps = 1/362 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    Y TI+    K   V+ A  L  +MKG+   P V TY  LI GL      ++A  L
Sbjct: 263 PTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSL 322

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG-FC 132
           FF M+  G +P VV  N +++ L + G++++A +L   M      PN  TY+T++   F 
Sbjct: 323 FFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFE 382

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                + A   F  M++ G      +Y ILI+G+CK   VE+AL L  EM  KG  P   
Sbjct: 383 SKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPA 442

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y +L   L    + E A +LF+E++ +   +    Y   I      G + +AV+LF  +
Sbjct: 443 AYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEM 502

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             L C  D+  YN L+ G+ ++G ++ A  L R++       D+ ++NI+++GL   G  
Sbjct: 503 KKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGP 562

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A ++F  M+E+ + P+ + + T++    R        +L+ +MK K    D+   S +
Sbjct: 563 KRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSI 622

Query: 373 VD 374
           ++
Sbjct: 623 LE 624



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 170/339 (50%), Gaps = 1/339 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C P   TY  +I GL K G VD A +LF  M  +   PDVV  N+LI+ L  A    
Sbjct: 293 GKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLE 352

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKN-GKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +A +LF +M      P+VVT+N ++  + ++     EA+   + M    + P++FTY+ L
Sbjct: 353 DALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAIL 412

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DGFC T ++ +A  L   M+  G      +Y  LI+   + K  E A  L++E+     
Sbjct: 413 IDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCG 472

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           + +   Y  +        ++  A+ LF EM++   + D  TYN  + G+ + G I EA  
Sbjct: 473 RSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHS 532

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L R +    C  DI+++N +++GL K+G  + A+E+F  +    ++ D V+YN ++  L 
Sbjct: 533 LMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLS 592

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
             G  + A  L  +M+      + I + +++    ++++
Sbjct: 593 RAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGKVDE 631



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 167/347 (48%), Gaps = 4/347 (1%)

Query: 34  KAKALFLQMKG--ENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +AK  F +  G  ++   D  TY +LI  L  +   +E  R   +M+          ++ 
Sbjct: 105 RAKIQFFKWAGKRQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSE 164

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           I+  L K   +++A  +   +  R   P A  Y+TL+      G   +  EL+  + S G
Sbjct: 165 ILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEG 224

Query: 152 -CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
            C  D ++Y+ LI+ + K +  + A  L+ EM   G+ PT   Y T+    F++++VE A
Sbjct: 225 NCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAA 284

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           L+L EEM+    A    TY   I GL K G + +A  LF  +    C+ D+   N LI+ 
Sbjct: 285 LRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINI 344

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC-NDGQMDKAHDLFLDMEENAVAP 329
           L ++GRLE AL+LF  +       +VVTYN +I  +  +     +A   F  M+ N +AP
Sbjct: 345 LGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAP 404

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +   +  LI GF + N+  K + LL +M EK   P  +    ++D L
Sbjct: 405 SSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSL 451


>gi|255660972|gb|ACU25655.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
          Length = 376

 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 176/339 (51%), Gaps = 1/339 (0%)

Query: 27  CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           C+ G +D A+ ++ ++    ++PD V YN++++G        +   L+ EMM      SV
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELW-EMMGSEGNRSV 59

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
            +FN++M  L  NGK+DE   + +LM +     ++ TY  L+ GFC  G I+++  +   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
            E  G   D  +Y+ +ING CK   ++ A+S+   M+  G KP V  YNTL  GL    +
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASK 179

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
            E A+++F EM     +    TYNT I+GLCKN    EA  L + L     +  +  Y+ 
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSM 239

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           L+ GLC   R+E AL L+  +  +    DV  +NI+IHGLC+ G+M  A  L+ DM    
Sbjct: 240 LMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWK 299

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            APN++   TL+ GF +       + +  ++    + PD
Sbjct: 300 CAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPD 338



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 179/352 (50%), Gaps = 5/352 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALF--LQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           P+ V YN +++G  +   V K K  F   +M G   N  V ++N ++ GL      +E  
Sbjct: 23  PDAVVYNAMLNGYFR---VAKIKDCFELWEMMGSEGNRSVSSFNIMMRGLFDNGKVDEVI 79

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            ++  M + G     +T+ +++   CKNG +D++  +L++  Q+    +AF YS +++G 
Sbjct: 80  SIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGL 139

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    ++RA  +   M   GCK +   YN LING     + E+A+ ++REM +    PT+
Sbjct: 140 CKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTI 199

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYNTL  GL +      A  L +E+    +     TY+  + GLC +  +  A+ L+  
Sbjct: 200 ITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALXLWNQ 259

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D+Q +N LI GLC  G++++AL L+  + R     ++V++N ++ G   DG 
Sbjct: 260 VTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGD 319

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           +  A  ++  +  N + P++I +   + G    N+ S  I  LH    KK++
Sbjct: 320 IRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAILFLHDAVTKKIV 371



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 145/284 (51%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +++TY  ++ G CK G++DK+  +    + +    D   Y+++I+GLC   + + A  + 
Sbjct: 93  DSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVL 152

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M+  G +P+V  +N +++ L    K ++A R+   M      P   TY+TL++G C  
Sbjct: 153 NGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKN 212

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
                A  L   +   G     ++Y++L+ G C +  VE AL L+ ++ SKG KP V  +
Sbjct: 213 KMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMH 272

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L  GL  + +++ AL L+ +M R   A +  ++NT ++G  K+G I  A+ ++  +  
Sbjct: 273 NILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILR 332

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
              E DI +YN  ++GLC   R+  A+        + +V   +T
Sbjct: 333 NGLEPDIISYNITLEGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 119/207 (57%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           NG I   CKPN   YNT+I+GL      + A  +F +M   + +P ++TYN+LI+GLC  
Sbjct: 153 NGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKN 212

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
             + EA  L  E++D+G+ P V+T++++M  LC + +++ A  L + +  +  +P+   +
Sbjct: 213 KMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMH 272

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + L+ G C  GK+  A  L+  M    C  + VS+N L+ G+ K+ ++  AL ++  ++ 
Sbjct: 273 NILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILR 332

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            G++P +++YN    GL   +++  A+
Sbjct: 333 NGLEPDIISYNITLEGLCSCNRISDAI 359



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 142/277 (51%), Gaps = 1/277 (0%)

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           C++G +D A R+   +V+  V P+A  Y+ +++G+    KI    EL+  M S G +   
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            S+NI++ G   N +V+E +S++  M   G     +TY  L  G  +   ++ +L + E 
Sbjct: 61  -SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
            ++     D   Y+  I+GLCK   +  AV +   +    C+ ++  YN LI+GL  + +
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASK 179

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
            E A+ +FR +        ++TYN +I+GLC +    +A++L  ++ +  + P VI +  
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSM 239

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           L+ G    ++  + + L +++  K   PD  + ++++
Sbjct: 240 LMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILI 276



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 101/188 (53%), Gaps = 1/188 (0%)

Query: 7   EIGVV-CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           E+G + C P  +TYNT+I+GLCK     +A  L  ++  + ++P V+TY+ L+ GLC  +
Sbjct: 189 EMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDH 248

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
               A  L+ ++  +G +P V   N+++  LC  GKM  A  L   M +    PN  +++
Sbjct: 249 RVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHN 308

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TLM+GF   G I  A  ++  +   G + D +SYNI + G C    + +A+    + V+K
Sbjct: 309 TLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAILFLHDAVTK 368

Query: 186 GIKPTVVT 193
            I  T +T
Sbjct: 369 KIVLTKIT 376



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/174 (19%), Positives = 86/174 (49%), Gaps = 1/174 (0%)

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ 262
           E   ++ A ++++E+    V+ D   YN  ++G  +   I +  EL+  +G  +    + 
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGS-EGNRSVS 60

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
           ++N ++ GL  +G+++  + ++  +     V D +TY I++HG C +G +DK+  +    
Sbjct: 61  SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           E+     +   +  +I+G  +     + + +L+ M +    P+  + + +++ L
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGL 174


>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g16010-like [Cucumis sativus]
          Length = 637

 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 129/408 (31%), Positives = 194/408 (47%), Gaps = 43/408 (10%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDW 67
           G  C P    YNT+I  L  EG  +K   L+ ++  E N +PD +TY++LI        +
Sbjct: 187 GRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERY 246

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           + A RLF EM + G+ P+   +  I+    K  K++ A RL++ M  +   P  FTY+ L
Sbjct: 247 DFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTEL 306

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           + G    G+++ A  LF +M   GCK D V  N LIN   +   +E+AL L+ +M S   
Sbjct: 307 IKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQC 366

Query: 188 KPTVVTYNTLFLGLFEIHQ-VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            P VVTYNT+   +FE       A   FE+M+ + +A  + TY   IDG CK   + +A+
Sbjct: 367 APNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKAL 426

Query: 247 ELFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR-------RVLV--- 293
            L   +   G   C     AY  LID L ++ R E A ELF+ L         RV     
Sbjct: 427 LLLEEMDEKGFPPCP---AAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMI 483

Query: 294 -------------------------ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVA 328
                                     DV TYN ++ G+   G +D+AH L  +M EN   
Sbjct: 484 KHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCT 543

Query: 329 PNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           P++     +++G  +   P + IE+  KMKE ++MPDA   + ++  L
Sbjct: 544 PDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCL 591



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 177/362 (48%), Gaps = 1/362 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    Y TI+    K   V+ A  L  +MKG+   P V TY  LI GL      ++A  L
Sbjct: 263 PTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSL 322

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG-FC 132
           FF M+  G +P VV  N +++ L + G++++A +L   M      PN  TY+T++   F 
Sbjct: 323 FFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFE 382

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                + A   F  M++ G      +Y ILI+G+CK   VE+AL L  EM  KG  P   
Sbjct: 383 SKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPA 442

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            Y +L   L    + E A +LF+E++ +   +    Y   I      G + +AV+LF   
Sbjct: 443 AYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEX 502

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
             L C  D+  YN L+ G+ ++G ++ A  L R++       D+ ++NI+++GL   G  
Sbjct: 503 EKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGP 562

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            +A ++F  M+E+ + P+ + + T++    R        +L+ +MK K    D+   S +
Sbjct: 563 KRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSI 622

Query: 373 VD 374
           ++
Sbjct: 623 LE 624



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 169/339 (49%), Gaps = 1/339 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G  C P   TY  +I GL K G VD A +LF  M  +   PDVV  N+LI+ L  A    
Sbjct: 293 GKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLE 352

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKN-GKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +A +LF +M      P+VVT+N ++  + ++     EA+   + M    + P++FTY+ L
Sbjct: 353 DALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAIL 412

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +DGFC T ++ +A  L   M+  G      +Y  LI+   + K  E A  L++E+     
Sbjct: 413 IDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCG 472

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           + +   Y  +        ++  A+ LF E ++   + D  TYN  + G+ + G I EA  
Sbjct: 473 RSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHS 532

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
           L R +    C  DI+++N +++GL K+G  + A+E+F  +    ++ D V+YN ++  L 
Sbjct: 533 LMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLS 592

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
             G  + A  L  +M+      + I + +++    ++++
Sbjct: 593 RAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGKVDE 631



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 167/347 (48%), Gaps = 4/347 (1%)

Query: 34  KAKALFLQMKG--ENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
           +AK  F +  G  ++   D  TY +LI  L  +   +E  R   +M+          ++ 
Sbjct: 105 RAKIQFFKWAGKRQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSE 164

Query: 92  IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
           I+  L K   +++A  +   +  R   P A  Y+TL+      G   +  EL+  + S G
Sbjct: 165 ILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEG 224

Query: 152 -CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
            C  D ++Y+ LI+ + K +  + A  L+ EM   G+ PT   Y T+    F++++VE A
Sbjct: 225 NCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAA 284

Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
           L+L EEM+    A    TY   I GL K G + +A  LF  +    C+ D+   N LI+ 
Sbjct: 285 LRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINI 344

Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC-NDGQMDKAHDLFLDMEENAVAP 329
           L ++GRLE AL+LF  +       +VVTYN +I  +  +     +A   F  M+ N +AP
Sbjct: 345 LGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAP 404

Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +   +  LI GF + N+  K + LL +M EK   P  +    ++D L
Sbjct: 405 SSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSL 451


>gi|357499677|ref|XP_003620127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495142|gb|AES76345.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 412

 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 100/258 (38%), Positives = 151/258 (58%)

Query: 100 GKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
           G + EA  +L +M+++ + PNA TYS+LMDG+CL  ++N A+ +F +M   G   +  SY
Sbjct: 149 GNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSY 208

Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
           NI+ING+CK K  +EA++L+ EM  + + P VVTYN+L  GL +  ++ +ALKL +EM  
Sbjct: 209 NIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHD 268

Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
                D  TY++ +D LCKN  + +A+ L + L       ++  Y  LIDGLCK GRLE 
Sbjct: 269 RGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLED 328

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
           A  +F  L  +     V TY +MIHG CN G  D+A  L   M++N+  PN + +  +I 
Sbjct: 329 AHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIR 388

Query: 340 GFVRINKPSKVIELLHKM 357
                ++  K   LL +M
Sbjct: 389 SLFDNDENDKAENLLREM 406



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 136/257 (52%), Gaps = 6/257 (2%)

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EAK +   MM QG+ P+ VT++ +MD  C   +++ A  +   M  R V  N ++Y+ ++
Sbjct: 153 EAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMI 212

Query: 129 DGFCLTGKINRAEELFGSMESMGCKH---DDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           +GFC   KI   +E     E M C+    D V+YN LING CK+ ++  AL L  EM  +
Sbjct: 213 NGFC---KIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDR 269

Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
           G  P ++TY++L   L + HQV+ A+ L + ++   +  +  TY   IDGLCK G + +A
Sbjct: 270 GQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDA 329

Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
             +F  L +    + +  Y  +I G C  G  + AL L   +       + +TY I+I  
Sbjct: 330 HNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRS 389

Query: 306 LCNDGQMDKAHDLFLDM 322
           L ++ + DKA +L  +M
Sbjct: 390 LFDNDENDKAENLLREM 406



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 142/265 (53%)

Query: 29  EGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVT 88
           EG V +AK +   M  + INP+ VTY+SL+ G C  N+ N AK +F  M  +GV  +V +
Sbjct: 148 EGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWS 207

Query: 89  FNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSME 148
           +N++++  CK    DEA  L + M  R + P+  TY++L++G C +GKI+ A +L   M 
Sbjct: 208 YNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMH 267

Query: 149 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 208
             G   D ++Y+ L++  CKN +V++A++L + +  +GI+P + TY  L  GL +  ++E
Sbjct: 268 DRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLE 327

Query: 209 HALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLI 268
            A  +FE++         +TY   I G C  G   EA+ L   +    C  +   Y  +I
Sbjct: 328 DAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIII 387

Query: 269 DGLCKSGRLEIALELFRSLPRRVLV 293
             L  +   + A  L R +  R L+
Sbjct: 388 RSLFDNDENDKAENLLREMITRGLL 412



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 116/203 (57%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           N  +YN +I+G CK    D+A  LF +M    + PDVVTYNSLI+GLC +   + A +L 
Sbjct: 204 NVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLV 263

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
            EM D+G  P ++T++ ++D LCKN ++D+A  LL  +  + +RPN +TY+ L+DG C  
Sbjct: 264 DEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKG 323

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G++  A  +F  +   G      +Y ++I+G+C     +EAL+L  +M      P  +TY
Sbjct: 324 GRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTY 383

Query: 195 NTLFLGLFEIHQVEHALKLFEEM 217
             +   LF+  + + A  L  EM
Sbjct: 384 EIIIRSLFDNDENDKAENLLREM 406



 Score =  138 bits (348), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 133/245 (54%), Gaps = 3/245 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTY++++DG C    V+ AK +F  M    +  +V +YN +I+G C     +EA  L
Sbjct: 168 PNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKMTDEAMNL 227

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM  + + P VVT+N +++ LCK+GK+  A +L+D M  R   P+  TYS+L+D  C 
Sbjct: 228 FEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCK 287

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             ++++A  L  +++  G + +  +Y ILI+G CK   +E+A +++ +++ KG   TV T
Sbjct: 288 NHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNT 347

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR--- 250
           Y  +  G       + AL L  +M+ +    +  TY   I  L  N    +A  L R   
Sbjct: 348 YTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLFDNDENDKAENLLREMI 407

Query: 251 TLGIL 255
           T G+L
Sbjct: 408 TRGLL 412



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 127/239 (53%)

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
           G +  A+ +   M   G   + V+Y+ L++GYC   EV  A  ++  M  +G+   V +Y
Sbjct: 149 GNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSY 208

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N +  G  +I   + A+ LFEEM    +  D  TYN+ I+GLCK+G I  A++L   +  
Sbjct: 209 NIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHD 268

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
                DI  Y+ L+D LCK+ +++ A+ L ++L  + +  ++ TY I+I GLC  G+++ 
Sbjct: 269 RGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLED 328

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           AH++F D+        V  +  +IHGF       + + LL KMK+    P+A    +++
Sbjct: 329 AHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIII 387



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 91/170 (53%)

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
           V+ A  +   M +  +  +  TY++ +DG C    +  A  +F T+ +     ++ +YN 
Sbjct: 151 VKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNI 210

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           +I+G CK    + A+ LF  +  R L+ DVVTYN +I+GLC  G++  A  L  +M +  
Sbjct: 211 MINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRG 270

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             P++I + +L+    + ++  K I LL  +K++ + P+    ++++D L
Sbjct: 271 QPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGL 320



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 4/105 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALF--LQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +PN  TY  +IDGLCK G ++ A  +F  L +KG NI   V TY  +IHG C+   ++EA
Sbjct: 307 RPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNIT--VNTYTVMIHGFCNKGLFDEA 364

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
             L  +M D    P+ +T+ +I+  L  N + D+A  LL  M+ R
Sbjct: 365 LALLSKMKDNSCFPNALTYEIIIRSLFDNDENDKAENLLREMITR 409


>gi|255660952|gb|ACU25645.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
          Length = 376

 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 176/339 (51%), Gaps = 1/339 (0%)

Query: 27  CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           C+ G +D A+ ++ ++    ++PD V YN++++G        +   L+ EMM      SV
Sbjct: 1   CESGDIDGAERVYKELVESKVSPDAVVYNAMLNGYFRVAKIKDCFELW-EMMGSEGNRSV 59

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
            +FN++M  L  NGK+DE   + +LM +     ++ TY  L+ GFC  G I+++  +   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
            E  G   D  +Y+ +ING CK   ++ ALS+   M+  G KP V  YNTL  GL    +
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASK 179

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
            E A+++F EM          TYNT I+GLCKN    EA  L + L     +  +  Y+ 
Sbjct: 180 FEDAIRVFREMGTMHCPPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSM 239

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           L+ GLC   ++E AL+L+  +  +    DV  +NI+IHGLC+ G+M  A  L+ DM    
Sbjct: 240 LMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWK 299

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            APN++   TL+ GF +       + +  ++    + PD
Sbjct: 300 CAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPD 338



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 179/352 (50%), Gaps = 5/352 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALF--LQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           P+ V YN +++G  +   V K K  F   +M G   N  V ++N ++ GL      +E  
Sbjct: 23  PDAVVYNAMLNGYFR---VAKIKDCFELWEMMGSEGNRSVSSFNIMMRGLFDNGKVDEVI 79

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            ++  M + G     +T+ +++   CKNG +D++  +L++  Q+    +AF YS +++G 
Sbjct: 80  SIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGL 139

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    ++RA  +   M   GCK +   YN LING     + E+A+ ++REM +    PT+
Sbjct: 140 CKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCPPTI 199

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYNTL  GL +      A  L +E+    +     TY+  + GLC +  +  A++L+  
Sbjct: 200 ITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQ 259

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D+Q +N LI GLC  G++++AL L+  + R     ++V++N ++ G   DG 
Sbjct: 260 VTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGD 319

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
           +  A  ++  +  N + P++I +   + G     + S  I  LH    KK++
Sbjct: 320 IRNALVIWARILRNGLEPDIISYNITLKGLCSCKRISDAILFLHDAVTKKIV 371



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 145/284 (51%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +++TY  ++ G CK G++DK+  +    + +    D   Y+++I+GLC   + + A  + 
Sbjct: 93  DSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVL 152

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M+  G +P+V  +N +++ L    K ++A R+   M      P   TY+TL++G C  
Sbjct: 153 NGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCPPTIITYNTLINGLCKN 212

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
                A  L   +   G     ++Y++L+ G C + +VE AL L+ ++ SKG KP V  +
Sbjct: 213 EMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMH 272

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L  GL  + +++ AL L+ +M R   A +  ++NT ++G  K+G I  A+ ++  +  
Sbjct: 273 NILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILR 332

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
              E DI +YN  + GLC   R+  A+        + +V   +T
Sbjct: 333 NGLEPDIISYNITLKGLCSCKRISDAILFLHDAVTKKIVLTKIT 376



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 118/207 (57%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           NG I   CKPN   YNT+I+GL      + A  +F +M   +  P ++TYN+LI+GLC  
Sbjct: 153 NGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCPPTIITYNTLINGLCKN 212

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
             + EA  L  E++D+G+ P V+T++++M  LC + K++ A +L + +  +  +P+   +
Sbjct: 213 EMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMH 272

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + L+ G C  GK+  A  L+  M    C  + VS+N L+ G+ K+ ++  AL ++  ++ 
Sbjct: 273 NILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILR 332

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            G++P +++YN    GL    ++  A+
Sbjct: 333 NGLEPDIISYNITLKGLCSCKRISDAI 359



 Score =  131 bits (329), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 143/277 (51%), Gaps = 1/277 (0%)

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           C++G +D A R+   +V+  V P+A  Y+ +++G+    KI    EL+  M S G +   
Sbjct: 1   CESGDIDGAERVYKELVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            S+NI++ G   N +V+E +S++  M   G     +TY  L  G  +   ++ +L + E 
Sbjct: 61  -SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
            ++     D   Y+  I+GLCK   +  A+ +   +    C+ ++  YN LI+GL  + +
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASK 179

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
            E A+ +FR +        ++TYN +I+GLC +    +A++L  ++ +  + P VI +  
Sbjct: 180 FEDAIRVFREMGTMHCPPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSM 239

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           L+ G    +K  + ++L +++  K   PD  + ++++
Sbjct: 240 LMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILI 276



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 103/188 (54%), Gaps = 1/188 (0%)

Query: 7   EIGVV-CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           E+G + C P  +TYNT+I+GLCK     +A  L  ++  + ++P V+TY+ L+ GLC  +
Sbjct: 189 EMGTMHCPPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDH 248

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
               A +L+ ++  +G +P V   N+++  LC  GKM  A  L   M +    PN  +++
Sbjct: 249 KVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHN 308

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TLM+GF   G I  A  ++  +   G + D +SYNI + G C  K + +A+    + V+K
Sbjct: 309 TLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCKRISDAILFLHDAVTK 368

Query: 186 GIKPTVVT 193
            I  T +T
Sbjct: 369 KIVLTKIT 376



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/174 (19%), Positives = 86/174 (49%), Gaps = 1/174 (0%)

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ 262
           E   ++ A ++++E+    V+ D   YN  ++G  +   I +  EL+  +G  +    + 
Sbjct: 2   ESGDIDGAERVYKELVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGS-EGNRSVS 60

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
           ++N ++ GL  +G+++  + ++  +     V D +TY I++HG C +G +DK+  +    
Sbjct: 61  SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           E+     +   +  +I+G  +     + + +L+ M +    P+  + + +++ L
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGL 174


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 175/330 (53%), Gaps = 11/330 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P    YN  +  LCK G V +A  +   MK     PDVVT+N+LI GLC A   +EA+++
Sbjct: 52  PTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQV 111

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM   G   ++VT+N +++ L   G+  EA  ++  M      P+  TY+ ++ GFC 
Sbjct: 112 LDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMT---TTPDTQTYNAIIHGFCK 168

Query: 134 TGKINRAEELFGSMESM----GCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIK 188
           +G+I+RA   +G +E M    GC  D  +Y+ILING CK+  + +A  L +EM+  K   
Sbjct: 169 SGEIDRA---YGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCC 225

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
            +VV +NTL  G  +   ++ A +L   M     A D  TY+T IDGLC+ G + +   L
Sbjct: 226 ASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFAL 285

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
              +    C+ D+  Y  L+ GLCK+G++  A  L + +       + VTY+++  GLC 
Sbjct: 286 LEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCK 345

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
             ++D A+DL   + +     +V+ F  L+
Sbjct: 346 IDKLDMANDLLTSIRDKGRITDVVAFEALL 375



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 176/351 (50%), Gaps = 6/351 (1%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           TY  ++   C  G +  A  L  +M+ +  + P    YN  +H LC +    EA  +   
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M D   +P VVTFN ++  LCK G++DEA ++LD M +     N  TY+TL++G    G 
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG- 138

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYN 195
             R+ E    M+ M    D  +YN +I+G+CK+ E++ A     EM  + G  P   TY+
Sbjct: 139 --RSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 196 TLFLGLFEIHQVEHALKLFEEM-QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
            L  GL +   +  A +L +EM  R D  A    +NT +DG CK   +  A EL  ++  
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C  D+  Y+ +IDGLC+ G ++    L   +  R    DVVTY +++ GLC  G+M +
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316

Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           A  L   M E+   PN + +  +  G  +I+K     +LL  +++K  + D
Sbjct: 317 ACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITD 367



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/295 (34%), Positives = 159/295 (53%), Gaps = 5/295 (1%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
            CKP+ VT+NT+I GLCK G +D+A+ +  +M+      ++VTYN+LI+GL  A    EA
Sbjct: 84  ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA 143

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR-DVRPNAFTYSTLMD 129
                 M      P   T+N I+   CK+G++D A   L+ M QR    P+ FTYS L++
Sbjct: 144 ---VLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILIN 200

Query: 130 GFCLTGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           G C +  + +A+EL   M     C    V++N L++GYCK ++++ A  L   M+  G  
Sbjct: 201 GLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCA 260

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P VVTY+T+  GL     V+    L E+M       D  TY   + GLCK G +VEA  L
Sbjct: 261 PDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRL 320

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
            + +    C  +   Y+ + DGLCK  +L++A +L  S+  +  + DVV +  ++
Sbjct: 321 VKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 167/330 (50%), Gaps = 6/330 (1%)

Query: 50  DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRL 108
           D  TY  L+   C A +   A  L  EM  Q G+ P+   +N  +  LCK+GK+ EA  +
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
           +  M     +P+  T++TL+ G C  G+++ A+++   ME  G   + V+YN LING   
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM-QRDDVAADTS 227
                EA+ + + M +    P   TYN +  G  +  +++ A    EEM QR   + DT 
Sbjct: 137 AGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 228 TYNTFIDGLCKNGYIVEAVELFRTL-GILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
           TY+  I+GLCK+  + +A EL + + G   C   + A+N L+DG CK+  L+ A EL  S
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           +       DVVTY+ +I GLC  G +DK   L   M      P+V+ +  L+ G  +  K
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
             +   L+ +M E    P+A   S+V D L
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGL 343



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 122/227 (53%), Gaps = 2/227 (0%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGE-NINPDVVTYNSLIHGLCHANDW 67
           G+   P+T TYN II G CK G +D+A     +MK     +PD  TY+ LI+GLC +++ 
Sbjct: 149 GMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNL 208

Query: 68  NEAKRLFFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
            +A  L  EM+ +     SVV FN ++D  CK   +D A  LL  M++    P+  TYST
Sbjct: 209 RKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYST 268

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           ++DG C  G +++   L   M S GCK D V+Y +L+ G CK  ++ EA  L + M+  G
Sbjct: 269 IIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDG 328

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
             P  VTY+ +F GL +I +++ A  L   ++      D   +   +
Sbjct: 329 CTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 107/191 (56%), Gaps = 1/191 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKG-ENINPDVVTYNSLIHGLCHANDWNEA 70
           C P+T TY+ +I+GLCK   + KA  L  +M G ++    VV +N+L+ G C A D + A
Sbjct: 188 CSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRA 247

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
           + L   M++ G  P VVT++ I+D LC+ G +D+   LL+ MV R  +P+  TY+ L+ G
Sbjct: 248 RELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTG 307

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
            C  GK+  A  L   M   GC  + V+Y+++ +G CK  +++ A  L   +  KG    
Sbjct: 308 LCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITD 367

Query: 191 VVTYNTLFLGL 201
           VV +  L L +
Sbjct: 368 VVAFEALLLSV 378


>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 608

 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 187/366 (51%), Gaps = 7/366 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+++ YN +I+   + G V +A  +F +MK     P   T+N+LI G  +A    E  +
Sbjct: 125 KPDSILYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLK 184

Query: 73  LFFEM-MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +   M +D  V+P+  T+N+++   C    ++EA  +L  MV   ++P+  TY+ L   +
Sbjct: 185 MLHLMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAY 244

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G+  RAE+L   M+      ++ +  I++NGYCK   + EAL     M   G+ P +
Sbjct: 245 AQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNL 304

Query: 192 VTYNTLFLGLFEIHQ---VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           V +N+L  G  +I     V+ AL L EE     V  D  T++T ++     G + +  E+
Sbjct: 305 VIFNSLIKGFLDITDTDGVDEALTLMEEY---GVKPDVITFSTIMNAWSSAGLMDKCQEI 361

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           F  +     E DI A++ L  G  ++G  E A  +  S+ +  +  +VV    +I G C+
Sbjct: 362 FNDMAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCS 421

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G+M+ A  ++  M E  ++PN+  F TLI G+    +P K  ELL  M+EK V P+ S 
Sbjct: 422 AGKMENAKMVYEKMCEIGISPNLKTFETLIWGYAEARQPGKAEELLQLMEEKGVFPEKST 481

Query: 369 VSMVVD 374
           + +V D
Sbjct: 482 IQLVAD 487



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 166/367 (45%), Gaps = 36/367 (9%)

Query: 44  GENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMD 103
           G+N    V +   L++ L      +EA  +F  +++ G +P+++T+  ++  L K    +
Sbjct: 51  GKNSCRTVHSRTKLMNILIGKGKPHEANLIFDNLVEDGHRPTLITYTTLVAALTKLKHFE 110

Query: 104 EASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC----------- 152
               L+  + +  ++P++  Y+ +++ F  +G +  A ++F  M+  GC           
Sbjct: 111 SIFLLISKVEENGMKPDSILYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLI 170

Query: 153 -------------------------KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
                                    K +D +YNIL+  +C  K +EEA ++  +MV+ GI
Sbjct: 171 KGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGI 230

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P VVTYN L     +  +   A  L  EMQ + VA +  T    ++G CK G ++EA+ 
Sbjct: 231 QPDVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALR 290

Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
               +  L    ++  +N LI G       +   E    +    +  DV+T++ +++   
Sbjct: 291 FVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWS 350

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
           + G MDK  ++F DM +  + P++  F  L  G+VR  +      +L  M +  V P+  
Sbjct: 351 SAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVV 410

Query: 368 IVSMVVD 374
           I + ++ 
Sbjct: 411 ICTTIIS 417



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 114/237 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T   I++G CKEG + +A     +MK   ++P++V +NSLI G     D +     
Sbjct: 267 PNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEA 326

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M + GV+P V+TF+ IM+     G MD+   + + M +  + P+   +S L  G+  
Sbjct: 327 LTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVR 386

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   AE +  SM   G + + V    +I+G+C   ++E A  +Y +M   GI P + T
Sbjct: 387 AGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKMVYEKMCEIGISPNLKT 446

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           + TL  G  E  Q   A +L + M+   V  + ST     D     G + EA  + +
Sbjct: 447 FETLIWGYAEARQPGKAEELLQLMEEKGVFPEKSTIQLVADAWRNIGLLCEAKRITK 503


>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 532

 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 188/357 (52%), Gaps = 1/357 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           TY  +I  LC+ G  D  + +   M+ +    D      L+     A  ++ AK+L  E+
Sbjct: 95  TYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEV 154

Query: 78  MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
             +  + S   +N +++EL K GK+ EA  L    +     PN +T++ L+ G C  G++
Sbjct: 155 QGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEV 214

Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-IKPTVVTYNT 196
            +  ELF +M+S GC  D V+YN LI+G CK  E++ A  L +E+ S+    P V+TY +
Sbjct: 215 EKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTS 274

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  G  ++ ++E A  LFEEM R  +     T+N  IDG  K G +V A  +   +    
Sbjct: 275 IISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYS 334

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
           C  D+  +  LIDG C++G + + L+++  +  R +  ++ TY+++I+ LC D ++ +A 
Sbjct: 335 CIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEAR 394

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           DL   ++ + V P   I+  +I GF +     +   ++ +M+EK+  PD    ++++
Sbjct: 395 DLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILI 451



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 178/346 (51%), Gaps = 1/346 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           ++  YN +++ L K G V +A  LF +    +  P+  T+N LI GLC   +  +   LF
Sbjct: 162 SSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELF 221

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDVRPNAFTYSTLMDGFCL 133
             M   G  P VVT+N ++  LCK  ++D A  LL ++  + D  P+  TY++++ GF  
Sbjct: 222 NAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRK 281

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A  LF  M   G +   V++N+LI+G+ K   +  A +++ +M S    P VVT
Sbjct: 282 LGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVT 341

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           + +L  G      +   LK+++ M+  +V+ +  TY+  I+ LCK+  I EA +L R L 
Sbjct: 342 FTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLK 401

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                     YN +IDG CK+G ++ A  +   +  +    D VT+ I+I G C  G+M 
Sbjct: 402 CSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMV 461

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           +A D+F  M     AP+ I   +L+   ++  KPS+   ++    E
Sbjct: 462 EALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEAFHIVQTASE 507



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 162/313 (51%), Gaps = 1/313 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PNT T+N +I GLC+ G V+K   LF  M+     PDVVTYN+LI GLC AN+ + A  L
Sbjct: 196 PNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDL 255

Query: 74  FFEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
             E+  +    P V+T+  I+    K GK++ AS L + M++  + P   T++ L+DGF 
Sbjct: 256 LKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFG 315

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  AE +   M S  C  D V++  LI+GYC+  ++   L ++  M ++ + P + 
Sbjct: 316 KIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIY 375

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY+ +   L + +++  A  L  +++  DV      YN  IDG CK G + EA  +   +
Sbjct: 376 TYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEM 435

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              +C  D   +  LI G C  GR+  AL++F+ +       D +T + ++  L   G+ 
Sbjct: 436 EEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKP 495

Query: 313 DKAHDLFLDMEEN 325
            +A  +     E+
Sbjct: 496 SEAFHIVQTASED 508



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 178/356 (50%), Gaps = 1/356 (0%)

Query: 22  IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG 81
           ++    + G  D AK L ++++GE        YN L++ L      +EA  LF E +   
Sbjct: 134 LVTSFAQAGKFDLAKKLIIEVQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFH 193

Query: 82  VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
             P+  TFN+++  LC+ G++++   L + M      P+  TY+TL+ G C   +++RA 
Sbjct: 194 SPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRAC 253

Query: 142 ELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 200
           +L   ++S   C  D ++Y  +I+G+ K  ++E A  L+ EM+  GI+PTVVT+N L  G
Sbjct: 254 DLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDG 313

Query: 201 LFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELD 260
             +I  +  A  + E+M       D  T+ + IDG C+ G I   ++++  +       +
Sbjct: 314 FGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPN 373

Query: 261 IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
           I  Y+ +I+ LCK  R+  A +L R L    +      YN +I G C  G +D+A+ +  
Sbjct: 374 IYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVT 433

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           +MEE    P+ + F  LI G     +  + +++  KM      PD   +S +V  L
Sbjct: 434 EMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACL 489



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 146/276 (52%), Gaps = 1/276 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN-INPDVVTYNSLIHGLCHANDWNEA 70
           C P+ VTYNT+I GLCK   +D+A  L  +++  N  +PDV+TY S+I G         A
Sbjct: 229 CLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAA 288

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             LF EM+  G++P+VVTFNV++D   K G M  A  + + M      P+  T+++L+DG
Sbjct: 289 SVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDG 348

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +C TG I    +++  M++     +  +Y+++IN  CK+  + EA  L R++    + P 
Sbjct: 349 YCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPK 408

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
              YN +  G  +   V+ A  +  EM+      D  T+   I G C  G +VEA+++F+
Sbjct: 409 PFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFK 468

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
            +  + C  D    + L+  L K+G+   A  + ++
Sbjct: 469 KMLAIGCAPDNITISSLVACLLKAGKPSEAFHIVQT 504



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 120/220 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P  VT+N +IDG  K G +  A+A+  +M   +  PDVVT+ SLI G C   D     +
Sbjct: 301 EPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLK 360

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           ++  M  + V P++ T++VI++ LCK+ ++ EA  LL  +   DV P  F Y+ ++DGFC
Sbjct: 361 VWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFC 420

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A  +   ME   C+ D V++ ILI G+C    + EAL ++++M++ G  P  +
Sbjct: 421 KAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNI 480

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
           T ++L   L +  +   A  + +    D   + +S   TF
Sbjct: 481 TISSLVACLLKAGKPSEAFHIVQTASEDLNLSFSSLRKTF 520


>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 496

 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 109/294 (37%), Positives = 160/294 (54%), Gaps = 9/294 (3%)

Query: 66  DWNEAKRLFFEMMDQ--GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
           D N  +  F   M Q  G+   V TF       CK GK+ EA  +   M+++  +PN  T
Sbjct: 204 DVNNLRECFVSFMFQYLGMMAPVSTF-------CKEGKVKEAKNVFAAMMKKGFKPNVVT 256

Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
           YS+LMDG+CL  ++N+A+ +F +M   G   D  SYNILING+CK K  + A++L+ EM 
Sbjct: 257 YSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMH 316

Query: 184 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIV 243
            + I P VVTYN+L  GL +  ++ +ALKL +EM       D  TY++ +D LCKN    
Sbjct: 317 CRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGD 376

Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
           +A+ L   L     + ++  Y  LI+GLCK GR E A  +F  L  +    +V TY +MI
Sbjct: 377 KAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMI 436

Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
           H  CN+G   +A  +   MEEN   PN + +  +I      ++  K  +LL +M
Sbjct: 437 HVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEM 490



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 145/300 (48%), Gaps = 35/300 (11%)

Query: 23  IDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGV 82
           +   CKEG V +AK +F  M  +   P+VVTY+SL+ G C   + N+AK +F  M   GV
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGV 285

Query: 83  QPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEE 142
            P + ++N++++  CK    D A  L + M  R + PN  TY++L+DG C +GKI+ A +
Sbjct: 286 NPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALK 345

Query: 143 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 202
           L   M   G   D ++Y+ L++  CKN   ++A++L  ++  +G++P + TY  L  GL 
Sbjct: 346 LVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLC 405

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ 262
           +  + E A  +FE++       + +TY   I   C NG   EA+ +   +    C     
Sbjct: 406 KGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGC----- 460

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
                                         + + VTY I+I  L +  + DKA  L L+M
Sbjct: 461 ------------------------------IPNAVTYEIIIRSLFDKDENDKAEKLLLEM 490



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 137/258 (53%), Gaps = 3/258 (1%)

Query: 122 FTYSTLM---DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
           F Y  +M     FC  GK+  A+ +F +M   G K + V+Y+ L++GYC  KEV +A S+
Sbjct: 217 FQYLGMMAPVSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSI 276

Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
           +  M   G+ P + +YN L  G  +I   + A+ LFEEM    +  +  TYN+ IDGLCK
Sbjct: 277 FNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCK 336

Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           +G I  A++L   +       DI  Y+ L+D LCK+   + A+ L   L  + L  ++ T
Sbjct: 337 SGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYT 396

Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
           Y I+I+GLC  G+ + A ++F D+       NV  +  +IH F       + + +L KM+
Sbjct: 397 YTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKME 456

Query: 359 EKKVMPDASIVSMVVDLL 376
           E   +P+A    +++  L
Sbjct: 457 ENGCIPNAVTYEIIIRSL 474



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 122/224 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTY++++DG C    V+KAK++F  M    +NPD+ +YN LI+G C     + A  
Sbjct: 251 KPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMN 310

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF EM  + + P+VVT+N ++D LCK+GK+  A +L+D M  R   P+  TYS+L+D  C
Sbjct: 311 LFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALC 370

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
                ++A  L   ++  G + +  +Y ILING CK    E+A +++ +++ KG    V 
Sbjct: 371 KNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVN 430

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           TY  +            AL +  +M+ +    +  TY   I  L
Sbjct: 431 TYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSL 474



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 115/204 (56%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +YN +I+G CK    D A  LF +M    I P+VVTYNSLI GLC +   + A +L
Sbjct: 287 PDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKL 346

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             EM D+G  P ++T++ ++D LCKN   D+A  LL  +  + ++PN +TY+ L++G C 
Sbjct: 347 VDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCK 406

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+   A+ +F  +   G   +  +Y ++I+ +C N    EAL++  +M   G  P  VT
Sbjct: 407 GGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVT 466

Query: 194 YNTLFLGLFEIHQVEHALKLFEEM 217
           Y  +   LF+  + + A KL  EM
Sbjct: 467 YEIIIRSLFDKDENDKAEKLLLEM 490



 Score =  117 bits (294), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 100/174 (57%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VTYN++IDGLCK G +  A  L  +M      PD++TY+SL+  LC  +  ++A  L
Sbjct: 322 PNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIAL 381

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++ DQG+QP++ T+ ++++ LCK G+ ++A  + + ++ +    N  TY+ ++  FC 
Sbjct: 382 LTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCN 441

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
            G    A  +   ME  GC  + V+Y I+I       E ++A  L  EM+++G+
Sbjct: 442 NGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMITRGL 495



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 4/105 (3%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALF--LQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +PN  TY  +I+GLCK G  + A+ +F  L +KG NIN  V TY  +IH  C+   + EA
Sbjct: 391 QPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNIN--VNTYTVMIHVFCNNGMFGEA 448

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQR 115
             +  +M + G  P+ VT+ +I+  L    + D+A +LL  M+ R
Sbjct: 449 LAMLSKMEENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMITR 493


>gi|255661010|gb|ACU25674.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
          Length = 376

 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 181/339 (53%), Gaps = 1/339 (0%)

Query: 27  CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           C+ G +D A+ ++  +    ++PD V YN++++G   A    +   L+ EMM +    SV
Sbjct: 1   CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELW-EMMGKEGSRSV 59

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
            +FN++M  L  NG++DE + + +LM +     ++ TY  L+ GFC  G IN++  L   
Sbjct: 60  ASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLHLLEI 119

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
            E  G   D ++Y  +ING CK  ++E+A+S+   M+  G KP    YN L  GL    +
Sbjct: 120 XERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALINGLIGASK 179

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
            E A+++F EM     +    TY+  I+GLCK+    EA +L + +        +  Y+ 
Sbjct: 180 SEDAIRVFREMGFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEMLEKGLTPSVITYSL 239

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           L+ GLC   ++E+AL+L+  + ++    DV  +NI+IHGLC+  +   A  L+LDM    
Sbjct: 240 LMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVAKTQHALSLYLDMNRWN 299

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            +PN++   TL+ GF +       + +  ++ + ++ PD
Sbjct: 300 CSPNLVTHNTLMEGFYKDGDIRNALVMWARILKNELQPD 338



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 161/318 (50%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +  ++N ++ GL   G VD+  +++  MK      D +TY  L+HG C     N++  L 
Sbjct: 58  SVASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLHLL 117

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
                +G     + +  +++ LCK  K+++A  +L+ M+Q   +PN   Y+ L++G    
Sbjct: 118 EIXERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALINGLIGA 177

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            K   A  +F  M    C    V+Y+ILING CK++   EA  L +EM+ KG+ P+V+TY
Sbjct: 178 SKSEDAIRVFREMGFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEMLEKGLTPSVITY 237

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + L  GL   H+VE AL+L+ ++ +     D   +N  I GLC       A+ L+  +  
Sbjct: 238 SLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVAKTQHALSLYLDMNR 297

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C  ++  +N L++G  K G +  AL ++  + +  L  D+++YNI + GLC+  ++  
Sbjct: 298 WNCSPNLVTHNTLMEGFYKDGDIRNALVMWARILKNELQPDIISYNITLKGLCSCNRISD 357

Query: 315 AHDLFLDMEENAVAPNVI 332
           A     D     + P  I
Sbjct: 358 AILFLHDAVRKKIFPTKI 375



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 147/286 (51%), Gaps = 4/286 (1%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +++TY  ++ G CK G+++K+  L    + +    D + Y  +I+GLC      +A  + 
Sbjct: 93  DSITYGILVHGFCKNGYINKSLHLLEIXERKGRXXDALAYXPMINGLCKETKLEKAVSVL 152

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M+  G +P+   +N +++ L    K ++A R+   M      P   TYS L++G C +
Sbjct: 153 NGMIQSGCKPNTHVYNALINGLIGASKSEDAIRVFREMGFPHCSPTIVTYSILINGLCKS 212

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            + + A +L   M   G     ++Y++L+ G C   +VE AL L+ ++  KG KP V  +
Sbjct: 213 ERFSEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMH 272

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L  GL  + + +HAL L+ +M R + + +  T+NT ++G  K+G I  A+ ++    I
Sbjct: 273 NILIHGLCSVAKTQHALSLYLDMNRWNCSPNLVTHNTLMEGFYKDGDIRNALVMWAR--I 330

Query: 255 LKCEL--DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
           LK EL  DI +YN  + GLC   R+  A+       R+ +    +T
Sbjct: 331 LKNELQPDIISYNITLKGLCSCNRISDAILFLHDAVRKKIFPTKIT 376



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 140/277 (50%), Gaps = 1/277 (0%)

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           C++G +D A R+   +V   V P+A  Y+ +++GF   G+I    EL+  M   G +   
Sbjct: 1   CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGKEGSR-SV 59

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            S+NI++ G   N  V+E  S++  M   G     +TY  L  G  +   +  +L L E 
Sbjct: 60  ASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLHLLEI 119

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
            +R     D   Y   I+GLCK   + +AV +   +    C+ +   YN LI+GL  + +
Sbjct: 120 XERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALINGLIGASK 179

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
            E A+ +FR +        +VTY+I+I+GLC   +  +A+DL  +M E  + P+VI +  
Sbjct: 180 SEDAIRVFREMGFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEMLEKGLTPSVITYSL 239

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           L+ G    +K    ++L +++ +K   PD  + ++++
Sbjct: 240 LMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILI 276



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 122/218 (55%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           NG I   CKPNT  YN +I+GL      + A  +F +M   + +P +VTY+ LI+GLC +
Sbjct: 153 NGMIQSGCKPNTHVYNALINGLIGASKSEDAIRVFREMGFPHCSPTIVTYSILINGLCKS 212

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
             ++EA  L  EM+++G+ PSV+T++++M  LC   K++ A +L + + ++  +P+   +
Sbjct: 213 ERFSEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMH 272

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + L+ G C   K   A  L+  M    C  + V++N L+ G+ K+ ++  AL ++  ++ 
Sbjct: 273 NILIHGLCSVAKTQHALSLYLDMNRWNCSPNLVTHNTLMEGFYKDGDIRNALVMWARILK 332

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
             ++P +++YN    GL   +++  A+    +  R  +
Sbjct: 333 NELQPDIISYNITLKGLCSCNRISDAILFLHDAVRKKI 370



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 94/182 (51%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  VTY+ +I+GLCK     +A  L  +M  + + P V+TY+ L+ GLC  +    A 
Sbjct: 195 CSPTIVTYSILINGLCKSERFSEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKVEMAL 254

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L+ ++  +G +P V   N+++  LC   K   A  L   M + +  PN  T++TLM+GF
Sbjct: 255 QLWNQVTKKGFKPDVQMHNILIHGLCSVAKTQHALSLYLDMNRWNCSPNLVTHNTLMEGF 314

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G I  A  ++  +     + D +SYNI + G C    + +A+    + V K I PT 
Sbjct: 315 YKDGDIRNALVMWARILKNELQPDIISYNITLKGLCSCNRISDAILFLHDAVRKKIFPTK 374

Query: 192 VT 193
           +T
Sbjct: 375 IT 376



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 105/213 (49%), Gaps = 7/213 (3%)

Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
           C++ +++ A  +Y+++V   + P  V YN +  G +   +++   +L+E M ++  +   
Sbjct: 1   CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGKEG-SRSV 59

Query: 227 STYNTFIDGLCKNGYIVEA---VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL 283
           +++N  + GL  NG + E     EL +  G ++   D   Y  L+ G CK+G +  +L L
Sbjct: 60  ASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVE---DSITYGILVHGFCKNGYINKSLHL 116

Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
                R+    D + Y  MI+GLC + +++KA  +   M ++   PN  ++  LI+G + 
Sbjct: 117 LEIXERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALINGLIG 176

Query: 344 INKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            +K    I +  +M      P     S++++ L
Sbjct: 177 ASKSEDAIRVFREMGFPHCSPTIVTYSILINGL 209


>gi|255661008|gb|ACU25673.1| pentatricopeptide repeat-containing protein [Xeroaloysia
           ovatifolia]
          Length = 369

 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 181/339 (53%), Gaps = 1/339 (0%)

Query: 27  CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           C+ G +D A+ ++  +    ++PD V YN++++G   A    +   L+ EMM +    SV
Sbjct: 1   CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELW-EMMGREGNRSV 59

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
            +FN++M  L  NG++DE + + +LM +     ++ TY  L+ GFC  G IN++  +  +
Sbjct: 60  ASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLET 119

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
            E  G   D  +Y+ +ING CK  ++E+A+S+   M+  G KP    YN L  GL    +
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASK 179

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
            E A+++F EM     +    TYN  I+GLCK+    EA +L + +        +  Y+ 
Sbjct: 180 SEDAIRVFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSL 239

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           L+ GLC   ++E+AL+L+  + +     DV  +N +IHGLC+ G+   A  L+LDM    
Sbjct: 240 LMKGLCLGHKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLYLDMNYWN 299

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            APN++   TL+ GF +       + +  ++ + ++ PD
Sbjct: 300 CAPNLVTQNTLMEGFYKDGDMRNALVIWARILKNELQPD 338



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 164/307 (53%), Gaps = 1/307 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +  ++N ++ GL   G VD+  +++  MK      D +TY  L+HG C     N++ R+ 
Sbjct: 58  SVASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVL 117

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
                +G       ++ +++ LCK  K+++A  +L+ M++   +PN   Y+ L++G    
Sbjct: 118 ETAERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGA 177

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            K   A  +F  M    C    V+YNILING CK++   EA  L +EM+ KG+ P+V+TY
Sbjct: 178 SKSEDAIRVFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITY 237

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           + L  GL   H++E AL+L+ ++ ++    D   +NT I GLC  G    A+ L+  +  
Sbjct: 238 SLLMKGLCLGHKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLYLDMNY 297

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
             C  ++   N L++G  K G +  AL ++  + +  L  D+++YNI + GLC+  ++  
Sbjct: 298 WNCAPNLVTQNTLMEGFYKDGDMRNALVIWARILKNELQPDIISYNITLKGLCSCNRISD 357

Query: 315 AHDLFLD 321
           A  LFL+
Sbjct: 358 AI-LFLN 363



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 173/348 (49%), Gaps = 1/348 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V YN +++G  + G +     L+ +M G   N  V ++N ++ GL      +E   +
Sbjct: 23  PDAVVYNAMLNGFYRAGRIKDCFELW-EMMGREGNRSVASFNIMMRGLFDNGRVDEVNSI 81

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           +  M   G     +T+ +++   CKNG ++++ R+L+   ++    +AF YS +++G C 
Sbjct: 82  WELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLETAERKGGVLDAFAYSAMINGLCK 141

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
             K+ +A  +   M   GCK +   YN LING     + E+A+ ++REM      PT+VT
Sbjct: 142 ETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASKSEDAIRVFREMGITHCSPTIVT 201

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN L  GL +  +   A  L +EM    +     TY+  + GLC    I  A++L+  + 
Sbjct: 202 YNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKIEMALQLWNQVT 261

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + D+Q +N LI GLC  G+ ++AL L+  +       ++VT N ++ G   DG M 
Sbjct: 262 KNGFKPDVQMHNTLIHGLCSVGKTQLALSLYLDMNYWNCAPNLVTQNTLMEGFYKDGDMR 321

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
            A  ++  + +N + P++I +   + G    N+ S  I  L+    KK
Sbjct: 322 NALVIWARILKNELQPDIISYNITLKGLCSCNRISDAILFLNDAVRKK 369



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 136/272 (50%), Gaps = 1/272 (0%)

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           C++G +D A R+   +V   V P+A  Y+ +++GF   G+I    EL+  M   G     
Sbjct: 1   CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGREG-NRSV 59

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            S+NI++ G   N  V+E  S++  M   G     +TY  L  G  +   +  +L++ E 
Sbjct: 60  ASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLET 119

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
            +R     D   Y+  I+GLCK   + +A+ +   +    C+ +   YN LI+GL  + +
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASK 179

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
            E A+ +FR +        +VTYNI+I+GLC   +  +A+DL  +M E  + P+VI +  
Sbjct: 180 SEDAIRVFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSL 239

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
           L+ G    +K    ++L +++ +    PD  +
Sbjct: 240 LMKGLCLGHKIEMALQLWNQVTKNGFKPDVQM 271



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 120/215 (55%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           NG I   CKPNT  YN +I+GL      + A  +F +M   + +P +VTYN LI+GLC +
Sbjct: 153 NGMIKSGCKPNTHVYNALINGLIGASKSEDAIRVFREMGITHCSPTIVTYNILINGLCKS 212

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
             + EA  L  EM+++G+ PSV+T++++M  LC   K++ A +L + + +   +P+   +
Sbjct: 213 ERFGEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKIEMALQLWNQVTKNGFKPDVQMH 272

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           +TL+ G C  GK   A  L+  M    C  + V+ N L+ G+ K+ ++  AL ++  ++ 
Sbjct: 273 NTLIHGLCSVGKTQLALSLYLDMNYWNCAPNLVTQNTLMEGFYKDGDMRNALVIWARILK 332

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
             ++P +++YN    GL   +++  A+    +  R
Sbjct: 333 NELQPDIISYNITLKGLCSCNRISDAILFLNDAVR 367



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 90/180 (50%), Gaps = 1/180 (0%)

Query: 7   EIGVV-CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           E+G+  C P  VTYN +I+GLCK     +A  L  +M  + + P V+TY+ L+ GLC  +
Sbjct: 189 EMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGH 248

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
               A +L+ ++   G +P V   N ++  LC  GK   A  L   M   +  PN  T +
Sbjct: 249 KIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLYLDMNYWNCAPNLVTQN 308

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TLM+GF   G +  A  ++  +     + D +SYNI + G C    + +A+    + V K
Sbjct: 309 TLMEGFYKDGDMRNALVIWARILKNELQPDIISYNITLKGLCSCNRISDAILFLNDAVRK 368



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/174 (21%), Positives = 87/174 (50%), Gaps = 1/174 (0%)

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ 262
           E   ++ A ++++++    V+ D   YN  ++G  + G I +  EL+  +G  +    + 
Sbjct: 2   ESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMG-REGNRSVA 60

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
           ++N ++ GL  +GR++    ++  + +   V D +TY I++HG C +G ++K+  +    
Sbjct: 61  SFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLETA 120

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           E      +   +  +I+G  +  K  K I +L+ M +    P+  + + +++ L
Sbjct: 121 ERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGL 174


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 193/401 (48%), Gaps = 41/401 (10%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           GVV  P+  TYN +IDG CK G +  A  +   M+    NPD  TYNSLI+GLC     +
Sbjct: 314 GVV--PSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLD 370

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL----------LDL------- 111
           EA+ L    + +G  P+V+TF  +++  CK  ++D+A R+          LDL       
Sbjct: 371 EAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLI 430

Query: 112 ------------------MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCK 153
                             M    + PN   Y++++DG+C  G +  A E+F  ME  GC 
Sbjct: 431 NVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCH 490

Query: 154 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 213
            +  +Y  LI G  ++K++ +A++L  +M   GI P V+ Y TL  G  + H+ ++A +L
Sbjct: 491 PNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRL 550

Query: 214 FEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCK 273
           FE M+++ +  D   YN   D LCK+G   EA       G++   L    Y  L+DG  K
Sbjct: 551 FEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVV---LTKVTYTSLVDGFSK 607

Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
           +G  + A  L   +      AD+ TY++++  LC   ++++A  +   M  + V  N++ 
Sbjct: 608 AGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVA 667

Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           +  +I   ++  K      L ++M      P A+  ++ + 
Sbjct: 668 YTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFIS 708



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 188/398 (47%), Gaps = 36/398 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND-----W- 67
           P+TVTYNT+I   CK+G +  A   F  ++   +  D  T N+L+ G C  +D     W 
Sbjct: 177 PDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWL 236

Query: 68  -----------------------------NEAKRLFFEMMDQGVQPSVVTFNVIMDELCK 98
                                         EA  L F M+  G   ++  + +++  LCK
Sbjct: 237 LMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCK 296

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
            G++ +A  LLD M  R V P+ +TY+ ++DG+C +G++  A  +   ME  GC  DD +
Sbjct: 297 EGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWT 356

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           YN LI G C  K ++EA  L    +++G  PTV+T+  L  G  +  +++ AL++   M 
Sbjct: 357 YNSLIYGLCGGK-LDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
             +   D   Y   I+ L K   + EA E    +       ++  Y  +IDG CK G + 
Sbjct: 416 SSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVG 475

Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
            ALE+F+ +       +  TY  +I+GL  D ++ KA  L   M+E+ + P VI + TLI
Sbjct: 476 AALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLI 535

Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
            G  + ++      L   M++  + PD    +++ D L
Sbjct: 536 QGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDAL 573



 Score =  177 bits (449), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 181/405 (44%), Gaps = 54/405 (13%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN  TY ++I GL ++  + KA AL  +M+ + I P V+ Y +LI G C  ++++ A 
Sbjct: 489 CHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAF 548

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           RLF  M   G+ P    +NV+ D LCK+G+ +EA   L   V++ V     TY++L+DGF
Sbjct: 549 RLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGF 605

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS-------------- 177
              G  + A  L   M + GCK D  +Y++L+   CK K++ EALS              
Sbjct: 606 SKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNI 665

Query: 178 ---------------------LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
                                L+ EM+S G KP+  TY        +I Q+E A  L  E
Sbjct: 666 VAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGE 725

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLI-------- 268
           M+RD V  D  TY+ FI+G    GY+  A    + +    CE +   Y  L+        
Sbjct: 726 MERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSL 785

Query: 269 --------DGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
                    G+     L    +L   + +  L   VVTY+ +I G C   ++++A  L  
Sbjct: 786 INAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLD 845

Query: 321 DMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            M   A++PN  I+  LI     I    K +  +  M E    P 
Sbjct: 846 HMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQ 890



 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 179/361 (49%), Gaps = 3/361 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+ N  +Y  +I GL +   V +A  L   M  +  + ++  Y  LI GLC     ++A+
Sbjct: 245 CRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDAR 304

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM  +GV PSV T+N ++D  CK+G+M +A  +  LM Q    P+ +TY++L+ G 
Sbjct: 305 GLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGL 364

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  GK++ AEEL     + G     +++  LINGYCK + +++AL +   M+S   K  +
Sbjct: 365 C-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDL 423

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y  L   L +  +++ A +   EM  + +A +   Y + IDG CK G +  A+E+F+ 
Sbjct: 424 QAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKL 483

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  +   Y  LI GL +  +L  A+ L   +    +   V+ Y  +I G C   +
Sbjct: 484 MEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHE 543

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
            D A  LF  ME+N + P+   +  L     +  +  +    L  +++  V+   +  S+
Sbjct: 544 FDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL--VRKGVVLTKVTYTSL 601

Query: 372 V 372
           V
Sbjct: 602 V 602



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 161/361 (44%), Gaps = 3/361 (0%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           NG I     P  +T+  +I+G CK   +D A  +   M   N   D+  Y  LI+ L   
Sbjct: 377 NGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKK 436

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
               EAK    EM   G+ P+VV +  I+D  CK G +  A  +  LM      PNA+TY
Sbjct: 437 CRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTY 496

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
            +L+ G     K+++A  L   M+  G     ++Y  LI G CK  E + A  L+  M  
Sbjct: 497 GSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEK 556

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
            G+ P    YN L   L +  + E A   +  + R  V     TY + +DG  K G    
Sbjct: 557 NGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDF 613

Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
           A  L   +    C+ D+  Y+ L+  LCK  +L  AL +   +    +  ++V Y I+I 
Sbjct: 614 AAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIIS 673

Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
            +  +G+ D A  LF +M  +   P+   +   I  + +I +  +   L+ +M+   V P
Sbjct: 674 EMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTP 733

Query: 365 D 365
           D
Sbjct: 734 D 734



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 167/354 (47%), Gaps = 3/354 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CK +   Y  +I+ L K+  + +AK    +M    + P+VV Y S+I G C       A 
Sbjct: 419 CKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAAL 478

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M  +G  P+  T+  ++  L ++ K+ +A  L+  M +  + P    Y+TL+ G 
Sbjct: 479 EVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQ 538

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C   + + A  LF  ME  G   D+ +YN+L +  CK+   EEA S    +V KG+  T 
Sbjct: 539 CKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTK 595

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY +L  G  +    + A  L E+M  +   AD  TY+  +  LCK   + EA+ +   
Sbjct: 596 VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQ 655

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           + +   + +I AY  +I  + K G+ + A  LF  +          TY + I   C  GQ
Sbjct: 656 MTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQ 715

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
           +++A  L  +ME + V P+V+ +   I+G   +    +    L +M +    P+
Sbjct: 716 IEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPN 769



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 164/374 (43%), Gaps = 16/374 (4%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           VTY +++DG  K G  D A  L  +M  E    D+ TY+ L+  LC     NEA  +  +
Sbjct: 596 VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQ 655

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           M   GV+ ++V + +I+ E+ K GK D A  L + M+    +P+A TY+  +  +C  G+
Sbjct: 656 MTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQ 715

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           I  AE L G ME  G   D V+Y+I ING      ++ A S  + MV    +P   TY  
Sbjct: 716 IEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWL 775

Query: 197 L---FL-------------GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
           L   FL             G++   ++    +L E M +  +     TY++ I G CK  
Sbjct: 776 LLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKAT 835

Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
            + EA  L   +       + + Y  LI   C        +     +        + +Y+
Sbjct: 836 RLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYH 895

Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
            +I GLC++G  D+A  LF D+       N + +  L  G ++        +LL  M  +
Sbjct: 896 YLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNR 955

Query: 361 KVMPDASIVSMVVD 374
               D+   SM+ D
Sbjct: 956 HCRIDSESYSMLTD 969



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 168/380 (44%), Gaps = 34/380 (8%)

Query: 19  YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
           YN  +  L +    +    L+  +  E + PD VTYN++I   C       A R F  + 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 79  DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
           + G+Q    T N ++   C+   + +A  LL +M     R N ++Y+ L+ G      + 
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVR 266

Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
            A  L   M   GC  +   Y +LI G CK   + +A  L  EM  +G+ P+V TYN + 
Sbjct: 267 EALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK-------------------- 238
            G  +  +++ AL +   M+++    D  TYN+ I GLC                     
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTP 386

Query: 239 ---------NGY-----IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
                    NGY     I +A+ +   +    C+LD+QAY  LI+ L K  RL+ A E  
Sbjct: 387 TVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETL 446

Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
             +    L  +VV Y  +I G C  G +  A ++F  ME     PN   + +LI+G ++ 
Sbjct: 447 NEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQD 506

Query: 345 NKPSKVIELLHKMKEKKVMP 364
            K  K + L+ KM+E  + P
Sbjct: 507 KKLHKAMALITKMQEDGITP 526



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 152/330 (46%), Gaps = 36/330 (10%)

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
           +L+  ++ +G+ P  VT+N ++   CK G +  A R   L+ +  ++ + +T + L+ G+
Sbjct: 165 KLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGY 224

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C T  + +A  L   M  MGC+ ++ SY ILI G  + + V EAL L   MV  G    +
Sbjct: 225 CRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNL 284

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
             Y  L  GL +  ++  A  L +EM    V     TYN  IDG CK+G + +A+ +   
Sbjct: 285 HMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKAL 344

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  D   YN LI GLC  G+L+ A EL      R     V+T+  +I+G C   +
Sbjct: 345 MEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAER 403

Query: 312 MD-----------------------------------KAHDLFLDMEENAVAPNVIIFVT 336
           +D                                   +A +   +M  N +APNV+I+ +
Sbjct: 404 IDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTS 463

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +I G+ ++      +E+   M+ +   P+A
Sbjct: 464 IIDGYCKVGMVGAALEVFKLMEHEGCHPNA 493



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 16/328 (4%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CK +  TY+ ++  LCK+  +++A ++  QM    +  ++V Y  +I  +      + AK
Sbjct: 626 CKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAK 685

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            LF EM+  G +PS  T+ V +   CK G+++EA  L+  M +  V P+  TY   ++G 
Sbjct: 686 SLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGC 745

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK----------------EVEEA 175
              G ++RA      M    C+ +  +Y +L+  + K                  E+   
Sbjct: 746 GHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTV 805

Query: 176 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDG 235
             L   M+  G+ PTVVTY+++  G  +  ++E A  L + M    ++ +   Y   I  
Sbjct: 806 WQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKC 865

Query: 236 LCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
            C      + V     +     +  +++Y+ LI GLC  G  + A  LF  L       +
Sbjct: 866 CCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHN 925

Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDME 323
            V + I+  GL   G +D    L   M+
Sbjct: 926 EVAWKILNDGLLKAGHVDFCSQLLAAMD 953



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 126/275 (45%), Gaps = 16/275 (5%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP+  TY   I   CK G +++A+ L  +M+ + + PDVVTY+  I+G  H    + A  
Sbjct: 697 KPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFS 756

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNG----------------KMDEASRLLDLMVQRD 116
               M+D   +P+  T+ +++    K                  +++   +LL+ M++  
Sbjct: 757 TLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHG 816

Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
           + P   TYS+++ GFC   ++  A  L   M       ++  Y +LI   C  K   + +
Sbjct: 817 LNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDV 876

Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
           S   +M+  G +P + +Y+ L +GL +    + A  LF ++   D   +   +    DGL
Sbjct: 877 SFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGL 936

Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
            K G++    +L   +    C +D ++Y+ L D +
Sbjct: 937 LKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSI 971



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 88/205 (42%)

Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
           +E  +A+   R +  K +  +   YN     L      E+  KL+  + ++ +  DT TY
Sbjct: 123 REAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTY 182

Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
           NT I   CK G +  A   F  L     ++D    N L+ G C++  L  A  L   +P 
Sbjct: 183 NTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPL 242

Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
                +  +Y I+I GL     + +A  L   M ++  + N+ ++  LI G  +  +   
Sbjct: 243 MGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHD 302

Query: 350 VIELLHKMKEKKVMPDASIVSMVVD 374
              LL +M  + V+P     + ++D
Sbjct: 303 ARGLLDEMPLRGVVPSVWTYNAMID 327


>gi|68566156|sp|P0C043.1|PP318_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At4g17915
          Length = 463

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/358 (33%), Positives = 183/358 (51%), Gaps = 4/358 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ VTYNT+I G C+   +++A A+  +M+   I PDV TYNSLI G       +    L
Sbjct: 46  PDVVTYNTLISGYCRFVGIEEAYAVTRRMRDAGIRPDVATYNSLIAGAARRLMLDHVLYL 105

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL--DLMVQRDVRPNAFTYSTLMDGF 131
           F EM++ G+ P + ++N +M    K GK +EA R+L  DL +   + P   TY+ L+D  
Sbjct: 106 FDEMLEWGIYPDLWSYNTLMCCYFKLGKHEEAFRVLYKDLQLA-GLNPGPDTYNVLLDAL 164

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G I+ A ELF  M+S   K + ++YNILING CK++ V  A  +  E+   G  P  
Sbjct: 165 CKCGYIDNALELFKEMQSR-FKPELMTYNILINGLCKSRRVGTAKWMLTELKKSGYTPNA 223

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           VTY T+    F+  ++   L+LF EM+R+    D   Y   +  L K G   EA E  + 
Sbjct: 224 VTYTTILKLYFKTRRIRRGLQLFLEMKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQE 283

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           L       DI +YN L++   K G L+   +L   + RR + AD  T+ I+++GL   GQ
Sbjct: 284 LVRKGRRHDIVSYNTLLNLYFKDGNLDAVDDLLGEIERRGMKADEYTHTIIVNGLLRTGQ 343

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
             +A + F+ M E  +  N++    L+ G  +     + +     M+ K      S+V
Sbjct: 344 TRRAEEHFVSMGEMGIGLNLVTCNCLVDGLCKAGHVDRAMRYFESMEVKDEYTYTSVV 401



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 166/311 (53%), Gaps = 10/311 (3%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKA-KALF--LQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           P+  +YNT++    K G  ++A + L+  LQ+ G N  PD  TYN L+  LC     + A
Sbjct: 116 PDLWSYNTLMCCYFKLGKHEEAFRVLYKDLQLAGLNPGPD--TYNVLLDALCKCGYIDNA 173

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
             LF EM  +  +P ++T+N++++ LCK+ ++  A  +L  + +    PNA TY+T++  
Sbjct: 174 LELFKEMQSR-FKPELMTYNILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKL 232

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +  T +I R  +LF  M+  G  +D  +Y  +++   K    +EA    +E+V KG +  
Sbjct: 233 YFKTRRIRRGLQLFLEMKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHD 292

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           +V+YNTL    F+   ++    L  E++R  + AD  T+   ++GL + G    A E F 
Sbjct: 293 IVSYNTLLNLYFKDGNLDAVDDLLGEIERRGMKADEYTHTIIVNGLLRTGQTRRAEEHFV 352

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
           ++G +   L++   NCL+DGLCK+G ++ A+  F S+     V D  TY  ++H LC D 
Sbjct: 353 SMGEMGIGLNLVTCNCLVDGLCKAGHVDRAMRYFESME----VKDEYTYTSVVHNLCKDM 408

Query: 311 QMDKAHDLFLD 321
           +   A  L L 
Sbjct: 409 RFVCASKLLLS 419



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 130/250 (52%), Gaps = 2/250 (0%)

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D  C   K+ +AE L      +G   D V+YN LI+GYC+   +EEA ++ R M   GI
Sbjct: 20  VDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRDAGI 79

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
           +P V TYN+L  G      ++H L LF+EM    +  D  +YNT +    K G   EA  
Sbjct: 80  RPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEEAFR 139

Query: 248 -LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            L++ L +         YN L+D LCK G ++ ALELF+ +  R    +++TYNI+I+GL
Sbjct: 140 VLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQSR-FKPELMTYNILINGL 198

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           C   ++  A  +  +++++   PN + + T++  + +  +  + ++L  +MK +    D 
Sbjct: 199 CKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLEMKREGYTYDG 258

Query: 367 SIVSMVVDLL 376
                VV  L
Sbjct: 259 YAYFAVVSAL 268



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 135/297 (45%), Gaps = 40/297 (13%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P   TYN ++D LCK G++D A  LF +M+     P+++TYN LI+GLC +     AK +
Sbjct: 152 PGPDTYNVLLDALCKCGYIDNALELFKEMQ-SRFKPELMTYNILINGLCKSRRVGTAKWM 210

Query: 74  FFEMMDQGVQPSVVTFNVIM-----------------------------------DELCK 98
             E+   G  P+ VT+  I+                                     L K
Sbjct: 211 LTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLEMKREGYTYDGYAYFAVVSALIK 270

Query: 99  NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
            G+  EA   +  +V++  R +  +Y+TL++ +   G ++  ++L G +E  G K D+ +
Sbjct: 271 TGRTKEAYEYMQELVRKGRRHDIVSYNTLLNLYFKDGNLDAVDDLLGEIERRGMKADEYT 330

Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
           + I++NG  +  +   A   +  M   GI   +VT N L  GL +   V+ A++ FE M+
Sbjct: 331 HTIIVNGLLRTGQTRRAEEHFVSMGEMGIGLNLVTCNCLVDGLCKAGHVDRAMRYFESME 390

Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
                 D  TY + +  LCK+   V A +L  +      ++   A   ++ GL  SG
Sbjct: 391 ----VKDEYTYTSVVHNLCKDMRFVCASKLLLSCYNKGIKIPTSARRAVLSGLRMSG 443



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 52/107 (48%)

Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
           L  +  N  +D LCK  +LE A  L     R  +  DVVTYN +I G C    +++A+ +
Sbjct: 11  LSTRLLNICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAV 70

Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
              M +  + P+V  + +LI G  R      V+ L  +M E  + PD
Sbjct: 71  TRRMRDAGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPD 117



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 6   GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           GE+G+    N VT N ++DGLCK G VD+A   F  M+ +    D  TY S++H LC   
Sbjct: 355 GEMGI--GLNLVTCNCLVDGLCKAGHVDRAMRYFESMEVK----DEYTYTSVVHNLCKDM 408

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR 107
            +  A +L     ++G++        ++  L  +G   EA +
Sbjct: 409 RFVCASKLLLSCYNKGIKIPTSARRAVLSGLRMSGCYGEARK 450


>gi|255660966|gb|ACU25652.1| pentatricopeptide repeat-containing protein [Verbena hastata]
          Length = 376

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 177/339 (52%), Gaps = 1/339 (0%)

Query: 27  CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
           C+ G +D A+ ++ ++    ++PD V YN++++G        +   L+ EMM      SV
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELW-EMMGSEGNRSV 59

Query: 87  VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
            +FN++M  L  NGK+DE   + +LM +     ++ TY  L+ GFC  G I+++  +   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
            E  G   D  +Y+ +ING CK   ++ ALS+   M+  G KP V  YNTL  GL    +
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASK 179

Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
            E A+++F EM     +    TYNT I+GLCKN    EA  L + L     +  +  Y+ 
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSM 239

Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
           L+ GLC   ++E AL+L+  +  +    DV  +NI+IHGLC+ G+M  A  L+ DM    
Sbjct: 240 LMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWK 299

Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
            APN++   TL+ GF +       + +  ++    + PD
Sbjct: 300 CAPNLVSHNTLMEGFYKDGDIRNALMIWARILRNGLEPD 338



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 181/353 (51%), Gaps = 5/353 (1%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALF--LQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           P+ V YN +++G  +   V K K  F   +M G   N  V ++N ++ GL      +E  
Sbjct: 23  PDAVVYNAMLNGYFR---VAKIKDCFELWEMMGSEGNRSVSSFNIMMRGLFDNGKVDEVI 79

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            ++  M + G     +T+ +++   CKNG +D++  +L++  Q+    +AF YS +++G 
Sbjct: 80  SIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGL 139

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C    ++RA  +   M   GCK +   YN LING     + E+A+ ++REM +    PT+
Sbjct: 140 CKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTI 199

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
           +TYNTL  GL +      A  L +E+    +     TY+  + GLC +  +  A++L+  
Sbjct: 200 ITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQ 259

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +     + D+Q +N LI GLC  G++++AL L+  + R     ++V++N ++ G   DG 
Sbjct: 260 VISKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGD 319

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
           +  A  ++  +  N + P++I +   + G    N+ S  I  LH    KK++P
Sbjct: 320 IRNALMIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVP 372



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 165/316 (52%), Gaps = 2/316 (0%)

Query: 18  TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
           ++N ++ GL   G VD+  +++  MK      D +TY  L+HG C  N + +      EM
Sbjct: 61  SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCK-NGYIDKSLHVLEM 119

Query: 78  MDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
            +Q G       ++ +++ LCK   +D A  +L+ M++   +PN   Y+TL++G     K
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASK 179

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
              A  +F  M +M C    ++YN LING CKN+   EA +L +E++ KG+ P V+TY+ 
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSM 239

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           L  GL   H+VE AL+L+ ++       D   +N  I GLC  G +  A+ L+  +   K
Sbjct: 240 LMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWK 299

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
           C  ++ ++N L++G  K G +  AL ++  + R  L  D+++YNI + GLC+  ++  A 
Sbjct: 300 CAPNLVSHNTLMEGFYKDGDIRNALMIWARILRNGLEPDIISYNITLKGLCSCNRISDAI 359

Query: 317 DLFLDMEENAVAPNVI 332
               D     + P  I
Sbjct: 360 LFLHDAVTKKIVPTKI 375



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 146/284 (51%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +++TY  ++ G CK G++DK+  +    + +    D   Y+++I+GLC   + + A  + 
Sbjct: 93  DSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVL 152

Query: 75  FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
             M+  G +P+V  +N +++ L    K ++A R+   M      P   TY+TL++G C  
Sbjct: 153 NGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKN 212

Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
                A  L   +   G     ++Y++L+ G C + +VE AL L+ +++SKG KP V  +
Sbjct: 213 EMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMH 272

Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
           N L  GL  + +++ AL L+ +M R   A +  ++NT ++G  K+G I  A+ ++  +  
Sbjct: 273 NILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALMIWARILR 332

Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
              E DI +YN  + GLC   R+  A+        + +V   +T
Sbjct: 333 NGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVPTKIT 376



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 121/207 (58%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           NG I   CKPN   YNT+I+GL      + A  +F +M   + +P ++TYN+LI+GLC  
Sbjct: 153 NGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKN 212

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
             + EA  L  E++D+G+ P V+T++++M  LC + K++ A +L + ++ +  +P+   +
Sbjct: 213 EMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMH 272

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           + L+ G C  GK+  A  L+  M    C  + VS+N L+ G+ K+ ++  AL ++  ++ 
Sbjct: 273 NILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALMIWARILR 332

Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHAL 211
            G++P +++YN    GL   +++  A+
Sbjct: 333 NGLEPDIISYNITLKGLCSCNRISDAI 359



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 143/277 (51%), Gaps = 1/277 (0%)

Query: 97  CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
           C++G +D A R+   +V+  V P+A  Y+ +++G+    KI    EL+  M S G +   
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
            S+NI++ G   N +V+E +S++  M   G     +TY  L  G  +   ++ +L + E 
Sbjct: 61  -SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
            ++     D   Y+  I+GLCK   +  A+ +   +    C+ ++  YN LI+GL  + +
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASK 179

Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
            E A+ +FR +        ++TYN +I+GLC +    +A++L  ++ +  + P VI +  
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSM 239

Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           L+ G    +K  + ++L +++  K   PD  + ++++
Sbjct: 240 LMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILI 276



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 104/188 (55%), Gaps = 1/188 (0%)

Query: 7   EIGVV-CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
           E+G + C P  +TYNT+I+GLCK     +A  L  ++  + ++P V+TY+ L+ GLC  +
Sbjct: 189 EMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDH 248

Query: 66  DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
               A +L+ +++ +G +P V   N+++  LC  GKM  A  L   M +    PN  +++
Sbjct: 249 KVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHN 308

Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
           TLM+GF   G I  A  ++  +   G + D +SYNI + G C    + +A+    + V+K
Sbjct: 309 TLMEGFYKDGDIRNALMIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTK 368

Query: 186 GIKPTVVT 193
            I PT +T
Sbjct: 369 KIVPTKIT 376



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/174 (19%), Positives = 86/174 (49%), Gaps = 1/174 (0%)

Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ 262
           E   ++ A ++++E+    V+ D   YN  ++G  +   I +  EL+  +G  +    + 
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGS-EGNRSVS 60

Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
           ++N ++ GL  +G+++  + ++  +     V D +TY I++HG C +G +DK+  +    
Sbjct: 61  SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120

Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           E+     +   +  +I+G  +     + + +L+ M +    P+  + + +++ L
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGL 174


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 188/384 (48%), Gaps = 30/384 (7%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+P+   YN ++D L  +       AL+  MK E + P+V TYN L+  LC     + A 
Sbjct: 140 CEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGAC 199

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMD---------------------------- 103
           +L  EM ++G  P  V++  ++  +CK G +D                            
Sbjct: 200 KLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPVYNALIHGVCKECR 259

Query: 104 --EASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
             EA  L++ MV R V PN  +YST++      G +  +  +FG M   GC+ +  ++  
Sbjct: 260 FKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTS 319

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           LI G+     V +A+ L+  M+ +G+ P VV YNTL  GL     ++ A+ ++ +M++D 
Sbjct: 320 LIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDS 379

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
           +  + +TY+T I G  K+G +V A E +  +    C  ++  Y C++D LC+    + A 
Sbjct: 380 IRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAF 439

Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
           +L  ++        V+T+N  I GLC  G+++ A ++   ME+    PN+  +  L+ G 
Sbjct: 440 DLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGL 499

Query: 342 VRINKPSKVIELLHKMKEKKVMPD 365
            R N   +   L+ +++E+KV  D
Sbjct: 500 FRANAFREACGLIRELEERKVEFD 523



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 191/363 (52%), Gaps = 5/363 (1%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P+ V+Y T+I  +CK G VDKA+ L ++ +     P V  YN+LIHG+C    + EA 
Sbjct: 210 CDPDDVSYTTVISSMCKLGDVDKARELAMKFE-----PVVPVYNALIHGVCKECRFKEAF 264

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  EM+D+GV P+V++++ ++  L   G ++ +  +   M  R  RPN  T+++L+ GF
Sbjct: 265 DLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGF 324

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
            + G++  A  L+  M   G   + V+YN LI+G C +  ++EA+S++ +M    I+P V
Sbjct: 325 FVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNV 384

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY+T+  G  +   +  A + + +M       +   Y   +D LC+     +A +L   
Sbjct: 385 TTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDN 444

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C   +  +N  I GLC++GR+E A+ +   + +   + ++ TYN ++ GL     
Sbjct: 445 MISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANA 504

Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
             +A  L  ++EE  V  + + + T+++GF       +V++LL KM    +  D   V+ 
Sbjct: 505 FREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNT 564

Query: 372 VVD 374
            V+
Sbjct: 565 TVN 567



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 186/364 (51%), Gaps = 5/364 (1%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K   +TY T+ID L +   +D    L  QMK EN+      +  +I     +N   +  +
Sbjct: 71  KHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLK 130

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F+ + + G +PSV  +N+++D L         + L + M    + PN FTY+ L+   C
Sbjct: 131 MFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALC 190

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             GK++ A +L   M + GC  DDVSY  +I+  CK  +V++A    RE+  K  +P V 
Sbjct: 191 QNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKA----RELAMK-FEPVVP 245

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
            YN L  G+ +  + + A  L  EM    V  +  +Y+T I  L   G +  ++ +F  +
Sbjct: 246 VYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRM 305

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
            +  C  ++Q +  LI G    GR+  A+ L+  + R  +  +VV YN +IHGLC+DG M
Sbjct: 306 FVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNM 365

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
           D+A  ++  ME++++ PNV  + T+I+GF +        E  +KM      P+  + + +
Sbjct: 366 DEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCM 425

Query: 373 VDLL 376
           VD+L
Sbjct: 426 VDVL 429



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 184/361 (50%), Gaps = 1/361 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN ++Y+T+I  L   G V+ + A+F +M      P+V T+ SLI G        +A  L
Sbjct: 277 PNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGL 336

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           +  M+ +GV P+VV +N ++  LC +G MDEA  + + M +  +RPN  TYST++ GF  
Sbjct: 337 WNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAK 396

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           +G +  A E +  M + GC+ + V Y  +++  C+    ++A  L   M+S G  PTV+T
Sbjct: 397 SGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVIT 456

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N    GL    +VE A+ + ++M++ +   +  TYN  +DGL +     EA  L R L 
Sbjct: 457 FNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELE 516

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
             K E D   YN ++ G   +G  +  L+L   +    +  D +T N  ++  C  G++ 
Sbjct: 517 ERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVK 576

Query: 314 KAHDLFLDME-ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
            A  +  ++  E     ++I    ++ G        + +  LH+M ++ + P+ +  +++
Sbjct: 577 TAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVL 636

Query: 373 V 373
           V
Sbjct: 637 V 637



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 171/331 (51%), Gaps = 1/331 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C+PN  T+ ++I G    G V  A  L+  M  E ++P+VV YN+LIHGLC   + +EA 
Sbjct: 310 CRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAI 369

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            ++ +M    ++P+V T++ I+    K+G +  A    + M+    RPN   Y+ ++D  
Sbjct: 370 SVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVL 429

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C     ++A +L  +M S GC    +++N  I G C+   VE A+++  +M      P +
Sbjct: 430 CQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNI 489

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TYN L  GLF  +    A  L  E++   V  D  TYNT + G   NG   + ++L   
Sbjct: 490 RTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGK 549

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP-RRVLVADVVTYNIMIHGLCNDG 310
           + +   +LD    N  ++  CK G+++ A+++  ++   +   AD++T+ I++ G+CN  
Sbjct: 550 MLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWL 609

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
             ++A     +M +  + PN+  +  L+ GF
Sbjct: 610 GTEEAVVYLHEMLKRGIFPNIATWNVLVRGF 640



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 178/355 (50%)

Query: 7   EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
           E+ +  +P    YN +I G+CKE    +A  L  +M    ++P+V++Y+++I  L    +
Sbjct: 235 ELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGN 294

Query: 67  WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
              +  +F  M  +G +P+V TF  ++      G++ +A  L +LM++  V PN   Y+T
Sbjct: 295 VELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNT 354

Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
           L+ G C  G ++ A  ++  ME    + +  +Y+ +I G+ K+ ++  A   + +M++ G
Sbjct: 355 LIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCG 414

Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
            +P VV Y  +   L ++   + A  L + M  D       T+N FI GLC+ G +  A+
Sbjct: 415 CRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAM 474

Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
            +   +   +C  +I+ YN L+DGL ++     A  L R L  R +  D VTYN +++G 
Sbjct: 475 NVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGF 534

Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
             +G   +   L   M  N +  + I   T ++ + ++ K    I++L  +  +K
Sbjct: 535 SFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEK 589



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 112/233 (48%), Gaps = 1/233 (0%)

Query: 5   NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
           N  I   C+PN V Y  ++D LC+    D+A  L   M  +   P V+T+N+ I GLC A
Sbjct: 408 NKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRA 467

Query: 65  NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
                A  +  +M      P++ T+N ++D L +     EA  L+  + +R V  +  TY
Sbjct: 468 GRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTY 527

Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
           +T+M GF   G   +  +L G M   G K D ++ N  +N YCK  +V+ A+ +   + +
Sbjct: 528 NTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISA 587

Query: 185 -KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
            K  +  ++T+  +  G+      E A+    EM +  +  + +T+N  + G 
Sbjct: 588 EKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGF 640



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 1/193 (0%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  +T+N  I GLC+ G V+ A  +  QM+     P++ TYN L+ GL  AN + EA 
Sbjct: 450 CPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREAC 509

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            L  E+ ++ V+   VT+N IM     NG   +  +LL  M+   ++ +  T +T ++ +
Sbjct: 510 GLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAY 569

Query: 132 CLTGKINRAEELFGSMES-MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           C  GK+  A ++  ++ +    + D +++ I++ G C     EEA+    EM+ +GI P 
Sbjct: 570 CKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPN 629

Query: 191 VVTYNTLFLGLFE 203
           + T+N L  G F 
Sbjct: 630 IATWNVLVRGFFS 642


>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
 gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
          Length = 888

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 188/365 (51%), Gaps = 1/365 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +P+ ++Y  +I+   K G V KA A+  +M+   I  +  TY+ LI+G  H +D+  A  
Sbjct: 425 RPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFS 484

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +M+  G+QP    +N++++  CK G MD A R+ + M +  ++P+  T+  +++GF 
Sbjct: 485 IFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFA 544

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
           + G + RA +    M   GC    ++YN LI+G  +  +VE A+S+  +M   GI P   
Sbjct: 545 VAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEH 604

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  +  G      +  A + F +++   +  D   Y T +   CK+G +  A+ + R +
Sbjct: 605 TYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREM 664

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K   +   YN LIDG  + G +  A +L + +    +  ++ T+   I+  C  G M
Sbjct: 665 SFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDM 724

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD-ASIVSM 371
            +A ++  +M +  + PNV  F TLI G+ +++ P + ++   +MK   + PD A+   +
Sbjct: 725 QRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEAAYHCL 784

Query: 372 VVDLL 376
           V  LL
Sbjct: 785 VTSLL 789



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 173/393 (44%), Gaps = 35/393 (8%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           + KP+   +  ++    K G    A+A F  M+   I P+   + SL+H    A D   A
Sbjct: 248 IPKPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGA 307

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
                EM  +G++ +VVT+++++    K    + A +L      +    N   YS ++  
Sbjct: 308 LSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHA 367

Query: 131 FCLTGKINRAEELFGSME------------SM-----------------------GCKHD 155
            C +G ++RAEEL   ME            SM                       G +  
Sbjct: 368 HCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPS 427

Query: 156 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFE 215
            +SY  LIN Y K  +V +AL++ +EM S GIK    TY+ L  G   +H   +A  +FE
Sbjct: 428 IISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFE 487

Query: 216 EMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG 275
           +M +  +  D + YN  ++  CK G +  A+ +F  +   + +   + +  +I+G   +G
Sbjct: 488 DMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAG 547

Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
            ++ AL+    + R      V+TYN +IHGL    Q+++A  +   M    +APN   + 
Sbjct: 548 DMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYT 607

Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            ++ G+       K  E   K+KE  +  D  I
Sbjct: 608 IIMRGYAASGDIGKAFEYFTKIKESGLKLDVYI 640



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 118/234 (50%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C P  +TYN +I GL ++  V++A ++  +M    I P+  TY  ++ G   + D  +A 
Sbjct: 564 CAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAF 623

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
             F ++ + G++  V  +  ++   CK+G+M  A  +   M  + +  N F Y+ L+DG+
Sbjct: 624 EYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGW 683

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
              G +  A +L   M+  G   +  ++   IN  CK  +++ A ++ +EM   G+KP V
Sbjct: 684 ARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNV 743

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
            T+ TL  G  ++   + ALK FEEM+   +  D + Y+  +  L     ++E 
Sbjct: 744 KTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVMEG 797



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 124/261 (47%)

Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
           +R  +P+   +  ++  +   G  + A   F +M + G + +   +  L++ Y   +++ 
Sbjct: 246 ERIPKPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMR 305

Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
            ALS   EM S+G++ TVVTY+ L  G  + +  E A KLF+E +      +   Y+  I
Sbjct: 306 GALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNII 365

Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
              C++G +  A EL R +     +  I  Y+ ++ G   +   +  L +F  L      
Sbjct: 366 HAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFR 425

Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
             +++Y  +I+     G++ KA  +  +ME + +  N   +  LI+GF+ ++  +    +
Sbjct: 426 PSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSI 485

Query: 354 LHKMKEKKVMPDASIVSMVVD 374
              M +  + PD +I +++V+
Sbjct: 486 FEDMIKSGLQPDRAIYNLLVE 506



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 46/93 (49%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN  T+ + I+  CK G + +A+ +  +M    + P+V T+ +LI G    +  + A + 
Sbjct: 706 PNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKC 765

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
           F EM   G++P    ++ ++  L     + E S
Sbjct: 766 FEEMKSAGLKPDEAAYHCLVTSLLSRATVMEGS 798


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 186/362 (51%), Gaps = 1/362 (0%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KP  VTY+T I GLCK G V+ A  L   +   N   +  ++N +I+G C   +  EA +
Sbjct: 353 KPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQ 412

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +  EM   G+ P V +++++++  C  G + +   L++ M    ++P+  +Y++L+ G C
Sbjct: 413 VLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLC 472

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
               +  A ++F S+ +  CK+D   Y  LI+G+C   +++ A+ L  EM+   + PT  
Sbjct: 473 KKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAF 532

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +  +L  G +++   + AL++F  M RD +  DT   N  +DG C+ GY  EA+ L    
Sbjct: 533 SCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDF 592

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
                 L+  +YN +I  LCK G  E ALEL   + +R ++  VV Y+ +I G       
Sbjct: 593 QEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNF 652

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA-SIVSM 371
            +A +LF  M +  +  N+  +  L+  F   +K  +   +  +MKE+ +  D  S  ++
Sbjct: 653 KRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTL 712

Query: 372 VV 373
           +V
Sbjct: 713 IV 714



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 175/361 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  +Y+ +I+  C +G V K   L  +M+   I P +V+Y SLIHGLC  N    A  +
Sbjct: 424 PDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDI 483

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  +     +     +  ++D  C  G MD A +LL+ M+  ++ P AF+  +L+ G+  
Sbjct: 484 FHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYK 543

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G  ++A E+F +M   G   D ++ N +++G C+    +EAL+L  +    G      +
Sbjct: 544 LGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHS 603

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           YN +   L +    E AL+L   M + +V      Y+T I G  K      AV LF  + 
Sbjct: 604 YNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMV 663

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +    +I  Y  L+     S ++  A  +F+ +  R L  D ++Y  +I G CN+ +M 
Sbjct: 664 KVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMK 723

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           KA  LF +M     +PNVI +  +I GF + N+      +  KM    V+PD    ++++
Sbjct: 724 KAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLI 783

Query: 374 D 374
           D
Sbjct: 784 D 784



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 158/321 (49%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           CK ++  Y T+IDG C +G +D A  L  +M    + P   +  SLI G      +++A 
Sbjct: 492 CKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQAL 551

Query: 72  RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
            +F  M+  G+ P  +  N I+D  C+ G   EA  LL+   +     N  +Y+ ++   
Sbjct: 552 EVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKL 611

Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
           C  G   RA EL   M         V+Y+ LI+G+ K    + A++L+  MV  GI   +
Sbjct: 612 CKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNI 671

Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
            TY  L       H++  A  +F+EM+   +  D  +Y T I G C N  + +A  LF  
Sbjct: 672 ATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEE 731

Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
           +    C  ++  Y C+IDG CKS R+++A  +F  + R  ++ DVVTY ++I      G 
Sbjct: 732 MSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGY 791

Query: 312 MDKAHDLFLDMEENAVAPNVI 332
            D+AH L+  M++  V P+ I
Sbjct: 792 FDQAHKLYDVMKDKGVLPDDI 812



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 172/388 (44%), Gaps = 39/388 (10%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
           V ++ +I        ++ A  +F   K   + PD+ T N L+  L  AN     +R+F E
Sbjct: 248 VVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEE 307

Query: 77  MMDQGVQPSVVTFNVIMDELCKN----GKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           + D+G  P++ T+ ++M+  C +      M +A+ +L  + +   +P   TYST + G C
Sbjct: 308 LKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLC 367

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G +  A  L  ++       +  S+N +I G+CK  EV EAL +  EM S GI P V 
Sbjct: 368 KVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVY 427

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           +Y+ L         V   L L EEM+   +     +Y + I GLCK   +  AV++F ++
Sbjct: 428 SYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSI 487

Query: 253 GILKCELDIQAYNCLIDGLC-----------------------------------KSGRL 277
           G   C+ D   Y  LIDG C                                   K G  
Sbjct: 488 GASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLF 547

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
           + ALE+F ++ R  +  D +  N ++ G C  G   +A  L  D +E+    N   +  +
Sbjct: 548 DQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAI 607

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPD 365
           I+   +   P + +ELL +M ++ V+P 
Sbjct: 608 IYKLCKEGYPERALELLPRMLKRNVLPS 635



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 163/358 (45%), Gaps = 7/358 (1%)

Query: 23  IDGLCKEGFVDKAK--ALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQ 80
           I G C E   D  +  + FL    +++    V ++ LI      +    A  +F      
Sbjct: 218 IVGFCNEAKYDTFELFSAFLD-SPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHV 276

Query: 81  GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC----LTGK 136
           G++P + T N ++  L +  +++   R+ + +  R   PN +TY+ +M+ +C        
Sbjct: 277 GLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAG 336

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           + +A  + G +   G K   V+Y+  I+G CK   VE AL L R +          ++N 
Sbjct: 337 MRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFND 396

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +  G  +  +V  AL++ EEM+   +  D  +Y+  I+  C  G +++ ++L   +   +
Sbjct: 397 VIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQ 456

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            +  I +Y  LI GLCK   L+ A+++F S+       D   Y  +I G C  G MD A 
Sbjct: 457 IKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAI 516

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            L  +M  N + P      +LI G+ ++    + +E+ + M    + PD    + ++D
Sbjct: 517 KLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILD 574



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 99/186 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+ V Y+T+I G  K+    +A  LF +M    I  ++ TY  L+    H++  +EA  +
Sbjct: 634 PSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGI 693

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F EM ++G+    +++  ++   C N +M +A  L + M +    PN  TY+ ++DGFC 
Sbjct: 694 FKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCK 753

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           + +I+ A  +F  M       D V+Y +LI+ Y K+   ++A  LY  M  KG+ P  +T
Sbjct: 754 SNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDIT 813

Query: 194 YNTLFL 199
           +N L L
Sbjct: 814 HNVLGL 819



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 48/81 (59%)

Query: 12  CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
           C PN +TY  IIDG CK   +D A  +F +M  +++ PDVVTY  LI        +++A 
Sbjct: 737 CSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAH 796

Query: 72  RLFFEMMDQGVQPSVVTFNVI 92
           +L+  M D+GV P  +T NV+
Sbjct: 797 KLYDVMKDKGVLPDDITHNVL 817


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 196/363 (53%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P  V  N I+ GLC    +  A   F  M     +P++VT+++LI+  C     +EA  L
Sbjct: 238 PKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSL 297

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           +  M+++G+ P +V ++++++ L + GK++E + L  + + R V+ +   +S++MD +  
Sbjct: 298 YNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVR 357

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G + +A E++  M   G   + V+Y+ILING C+N  V EA  ++ +++ +G++P+V+T
Sbjct: 358 VGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLT 417

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y++L  G  +   +     L+  M R     D    +  I+GL + G + EA+  F    
Sbjct: 418 YSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAV 477

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                L+   +N LIDG  +  R    L+++  +    ++ DVVTY +++ GL   G++D
Sbjct: 478 KRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLD 537

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  LF  + +   +P+ II+ TLI GF +   P+  +++   M+   + PD  I ++++
Sbjct: 538 EALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLI 597

Query: 374 DLL 376
           ++ 
Sbjct: 598 NMF 600



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 199/423 (47%), Gaps = 70/423 (16%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLC---------- 62
            PN VTY+ +I+GLC+ G V +A  +F Q+  + + P V+TY+SLI G C          
Sbjct: 377 SPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFG 436

Query: 63  ---------HAND----------------WNEAKRLFFEMMDQG---------------- 81
                    H  D                 +EA R FF+ + +G                
Sbjct: 437 LYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCF 496

Query: 82  -------------------VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
                              V P VVT+ V++  L + G++DEA  L   ++++   P+  
Sbjct: 497 RLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHI 556

Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
            Y TL+DGFC         ++F  M+S G   D   YN+LIN + +   VE  L L RE+
Sbjct: 557 IYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREI 616

Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
           +  G++P +VTYNT+  G   +     A+KLFE ++      +  T+   ID  CK+G +
Sbjct: 617 IKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRM 676

Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
            +A+ +F ++     E +I  Y+CLIDG  K+   E A EL+  +    +  ++V+Y+I+
Sbjct: 677 DDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSIL 736

Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
           I GLC  G M++A   F       + P+VI +  LI G+ ++ + ++ + L   M    +
Sbjct: 737 IDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGI 796

Query: 363 MPD 365
           MPD
Sbjct: 797 MPD 799



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 186/353 (52%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
            PN VT++T+I+  CKE  +D+A +L+  M  + I PD+V Y+ LI+GL  A    E   
Sbjct: 272 SPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNS 331

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           LF   + +GV+  VV F+ IMD   + G + +A  +   M++  + PN  TYS L++G C
Sbjct: 332 LFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLC 391

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G++  A  +FG +   G +   ++Y+ LI+G+CK++ + +   LY  M+ KG  P VV
Sbjct: 392 RNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVV 451

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
             + L  GL     ++ AL+ F +  +  +  +   +N  IDG  +     + ++++  +
Sbjct: 452 VCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILM 511

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
           G+ K   D+  Y  L+ GL + GRL+ AL LF  L ++    D + Y  +I G C     
Sbjct: 512 GMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDP 571

Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
                +F  M+ N + P++ I+  LI+ F R      V+ELL ++ +  + PD
Sbjct: 572 ATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPD 624



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 191/397 (48%), Gaps = 35/397 (8%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           K + V +++I+D   + G + KA  ++ +M  E I+P+VVTY+ LI+GLC      EA  
Sbjct: 342 KMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACG 401

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           +F +++ QG++PSV+T++ ++D  CK+  + +   L  +M+++   P+    S L++G  
Sbjct: 402 VFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLS 461

Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
             G ++ A   F      G   ++  +N LI+G  + K   + L +Y  M    + P VV
Sbjct: 462 RQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVV 521

Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
           TY  L  GL E  +++ AL LF ++ +   + D   Y T IDG CK       +++F+ +
Sbjct: 522 TYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLM 581

Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN---- 308
                  DI  YN LI+   + G +E  LEL R + +  L  D+VTYN MI G C+    
Sbjct: 582 QSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIF 641

Query: 309 -------------------------------DGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
                                          DG+MD A  +F  M E    PN++ +  L
Sbjct: 642 SKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCL 701

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           I G+ +        EL  KM   +V P+    S+++D
Sbjct: 702 IDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILID 738



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 160/297 (53%)

Query: 77  MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
           ++++G+ P +V  N I+  LC   ++  AS   D+MV+    PN  T+STL++ +C   +
Sbjct: 231 LVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELR 290

Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
           ++ A  L+  M   G   D V Y+ILING  +  ++EE  SL+   +++G+K  VV +++
Sbjct: 291 LDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSS 350

Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
           +      +  +  A++++  M ++ ++ +  TY+  I+GLC+NG ++EA  +F  +    
Sbjct: 351 IMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQG 410

Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
            E  +  Y+ LIDG CKS  L     L+  + R+  V DVV  +++I+GL   G MD+A 
Sbjct: 411 LEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEAL 470

Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
             F    +  +  N  +F  LI G  R+ +    +++   M   KV+PD    +++V
Sbjct: 471 RFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLV 527



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 166/388 (42%), Gaps = 91/388 (23%)

Query: 74  FFEMMDQ--GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ---------------RD 116
           FFE  +   G+   V +F  I   L ++   D A+R+ D MV                R+
Sbjct: 75  FFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHGSFRN 134

Query: 117 VRPNAFT-YSTLMDGFCLTGKINRAEELFGSMESMG------------------------ 151
              N  T YS L+  +C  G ++RA + F  M  MG                        
Sbjct: 135 YGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVI 194

Query: 152 -------CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 204
                  CK   V Y  + N + K  EVE+ L+ +R +V +G+ P +V  N +  GL   
Sbjct: 195 LENYEEMCKGLGV-YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMG 253

Query: 205 HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---GILKCELDI 261
           +Q+  A   F+ M R   + +  T++T I+  CK   + EA  L+  +   GI+    D+
Sbjct: 254 NQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVP---DL 310

Query: 262 QAYNCLIDGLCKSGRLE-----------------------------------IALELFRS 286
             Y+ LI+GL ++G+LE                                    A+E++  
Sbjct: 311 VIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTR 370

Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
           + +  +  +VVTY+I+I+GLC +G++ +A  +F  + +  + P+V+ + +LI GF +   
Sbjct: 371 MLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSEN 430

Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVD 374
                 L   M  K  +PD  + SM+++
Sbjct: 431 LRDGFGLYGIMLRKGHVPDVVVCSMLIN 458



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 79/145 (54%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           +PN +T+  +ID  CK+G +D A  +F  M      P+++TY+ LI G     +   A  
Sbjct: 657 QPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFE 716

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
           L+ +M+   V P++V++++++D LCK G M+EAS      + R + P+   Y  L+ G+C
Sbjct: 717 LYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYC 776

Query: 133 LTGKINRAEELFGSMESMGCKHDDV 157
             G++  A  L+  M   G   DD+
Sbjct: 777 KVGRLAEAMMLYDHMLVNGIMPDDL 801


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 183/353 (51%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T+N +I+ LC EG   K+  L  +M+     P +VTYN+++H  C    +  A  L
Sbjct: 191 PDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              M  +GV   V T+N+++ +LC++ +  +   LL  M +R + PN  TY+TL++GF  
Sbjct: 251 LDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSN 310

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GK+  A +L   M + G   + V++N LI+G+      +EAL ++  M +KG+  T V+
Sbjct: 311 EGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVS 370

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y  L  GL +  + + A   +  M+R+ V     TY   IDGLCKNG++ EAV +   + 
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMS 430

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
               + DI  Y+ LI+G C+ GRL+ A E+   + R  L  + + Y+ +I+  C  G + 
Sbjct: 431 KDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
           +   ++  M      P+   F  L+    +  K ++  E +  M    ++P+A
Sbjct: 491 ETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNA 543



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 179/386 (46%), Gaps = 38/386 (9%)

Query: 17  VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK----- 71
           +TY  +IDGLCK GF+D+A  +  +M  + I+PD+VTY++LI+G C       AK     
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCR 463

Query: 72  ------------------------------RLFFEMMDQGVQPSVVTFNVIMDELCKNGK 101
                                         R++  M+ +G  P   TFNV++  LCK GK
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGK 523

Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
           + EA   +  M    + PNA ++  L++G+  +G+  +A  +F  M  +G      +Y  
Sbjct: 524 VAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583

Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
           L+ G CK   +  A    + + +       V  NTL   + +   ++ A+ LF EM +  
Sbjct: 584 LLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRS 643

Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL--DIQAYNCLIDGLCKSGRLEI 279
           +  D+ TY + I GLC+ G  V A+ LF      +  L  +   Y C +DG+ K+G+ + 
Sbjct: 644 ILPDSFTYTSLISGLCRKGKTVIAI-LFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKA 702

Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
                + + +  L  DVVT N MI G    G+++K HDL  +M      PN+  +  L+H
Sbjct: 703 GFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLH 762

Query: 340 GFVRINKPSKVIELLHKMKEKKVMPD 365
           G+ +    S    L   M    ++PD
Sbjct: 763 GYSKRKHVSTSFMLYRSMILSGILPD 788



 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 182/363 (50%), Gaps = 3/363 (0%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN VT+N +IDG   EG   +A  +F  M+ + +    V+Y  L+ GLC   +++ A+  
Sbjct: 331 PNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGF 390

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           +  M   GV    +T+  ++D LCKNG +DEA  +L+ M +  + P+  TYS L++GFC 
Sbjct: 391 YMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCR 450

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G++  A+E+   +  +G   + + Y+ LI   C+   ++E + +Y  M+ +G  P   T
Sbjct: 451 VGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFT 510

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L   L +  +V  A +    M  D +  +  +++  I+G   +G  ++A  +F  + 
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMT 570

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            +        Y  L+ GLCK G L  A +  +SL       D V  N +I  +C  G +D
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLD 630

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK--VMPDASIVSM 371
           KA  LF +M + ++ P+   + +LI G  R  K    I L  K  E +  ++P+  + + 
Sbjct: 631 KAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAI-LFAKEAEARGNLVPNKVMYTC 689

Query: 372 VVD 374
            VD
Sbjct: 690 FVD 692



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 183/366 (50%), Gaps = 6/366 (1%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           +C  N   ++ +I    +EG +  +  +F  M     NP V T N+++  +  + +    
Sbjct: 118 LCNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSV 177

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
                EM+ + + P V TFN++++ LC  G   ++S L+  M +    P   TY+T++  
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHW 237

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +C  G+   A EL   M   G   D  +YN+LI+  C++    +   L R+M  + I P 
Sbjct: 238 YCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPN 297

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
            VTYNTL  G     +V  A +L  EM    ++ +  T+N  IDG    G   EA+++F 
Sbjct: 298 EVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFH 357

Query: 251 TL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
            +   G++  E+   +Y  L+DGLCK+   ++A   +  + R  +    +TY  MI GLC
Sbjct: 358 MMEAKGLIGTEV---SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 414

Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
            +G +D+A  +  +M ++ + P+++ +  LI+GF R+ +     E++ ++    + P+  
Sbjct: 415 KNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGI 474

Query: 368 IVSMVV 373
           I S ++
Sbjct: 475 IYSTLI 480



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 173/363 (47%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P+  T N I+  + K        +   +M    I PDV T+N LI+ LC    + ++  L
Sbjct: 156 PSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYL 215

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             +M   G  P++VT+N ++   CK G+   A  LLD M  + V  +  TY+ L+   C 
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCR 275

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
           + +  +   L   M       ++V+YN L+NG+    +V  A  L  EM++ G+ P  VT
Sbjct: 276 SNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVT 335

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           +N L  G       + ALK+F  M+   +     +Y   +DGLCKN     A   +  + 
Sbjct: 336 FNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMK 395

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                +    Y  +IDGLCK+G L+ A+ +   + +  +  D+VTY+ +I+G C  G++ 
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLK 455

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A ++   +    ++PN II+ TLI+   R+    + I +   M  +   PD    +++V
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLV 515

Query: 374 DLL 376
             L
Sbjct: 516 TSL 518



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 160/328 (48%)

Query: 15   NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
            + VT N +IDG  + G ++K   L  +M  +N  P++ TYN L+HG       + +  L+
Sbjct: 718  DVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLY 777

Query: 75   FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
              M+  G+ P  +T   I+  +C++  ++   ++L   + R V  +  T++ L+   C  
Sbjct: 778  RSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCAN 837

Query: 135  GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
            G+IN A ++   M S+G   D  + + +++   +N   +E+  +  EM  +GI P    Y
Sbjct: 838  GEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897

Query: 195  NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
              L  GL  +  ++ A  + EEM    +       +  +  L K G   EA  L R++  
Sbjct: 898  IGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLK 957

Query: 255  LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
            +K    I ++  L+   CK+G +  ALEL   +    L  D+V+YN++I GLC  G M  
Sbjct: 958  MKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAI 1017

Query: 315  AHDLFLDMEENAVAPNVIIFVTLIHGFV 342
            A +LF +M+ +    NV  +  L+ G +
Sbjct: 1018 AFELFEEMKRDGFLANVTTYKALVGGIL 1045



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 170/363 (46%), Gaps = 1/363 (0%)

Query: 15  NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
           +TV  NT+I  +CK G +DKA +LF +M   +I PD  TY SLI GLC       A    
Sbjct: 612 DTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFA 671

Query: 75  FEMMDQG-VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
            E   +G + P+ V +   +D + K G+          M +  +  +  T + ++DG+  
Sbjct: 672 KEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSR 731

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            GKI +  +L   M +     +  +YNIL++GY K K V  +  LYR M+  GI P  +T
Sbjct: 732 MGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLT 791

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
             ++ LG+ E + +E  LK+ +      V  D  T+N  I   C NG I  A ++   + 
Sbjct: 792 CYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMT 851

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
            L   LD    + ++  L ++ R + +  +   + ++ +  +   Y  +++GLC  G + 
Sbjct: 852 SLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIK 911

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A  +  +M  + + P  +    ++    +  K  +   LL  M + K++P  +  + ++
Sbjct: 912 TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLM 971

Query: 374 DLL 376
            L 
Sbjct: 972 HLF 974



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 152/329 (46%), Gaps = 2/329 (0%)

Query: 46  NINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA 105
           N NP V  ++ LI          ++  +F  M   G  PSV T N I+  + K+ +    
Sbjct: 120 NSNPSV--FDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSV 177

Query: 106 SRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILING 165
              L  M++R + P+  T++ L++  C  G   ++  L   ME  G     V+YN +++ 
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHW 237

Query: 166 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAAD 225
           YCK    + A+ L   M  KG+   V TYN L   L   ++      L  +M++  +  +
Sbjct: 238 YCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPN 297

Query: 226 TSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFR 285
             TYNT ++G    G ++ A +L   +       +   +N LIDG    G  + AL++F 
Sbjct: 298 EVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFH 357

Query: 286 SLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRIN 345
            +  + L+   V+Y +++ GLC + + D A   ++ M+ N V    I +  +I G  +  
Sbjct: 358 MMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417

Query: 346 KPSKVIELLHKMKEKKVMPDASIVSMVVD 374
              + + +L++M +  + PD    S +++
Sbjct: 418 FLDEAVVMLNEMSKDGIDPDIVTYSALIN 446



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/399 (22%), Positives = 172/399 (43%), Gaps = 36/399 (9%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN V+++ +I+G    G   KA ++F +M     +P   TY SL+ GLC       A++ 
Sbjct: 541 PNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKF 600

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
              + +       V  N ++  +CK+G +D+A  L   MVQR + P++FTY++L+ G C 
Sbjct: 601 LKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCR 660

Query: 134 TGK------INRAEELFGS------------------------------MESMGCKHDDV 157
            GK        +  E  G+                              M+ +G   D V
Sbjct: 661 KGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVV 720

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
           + N +I+GY +  ++E+   L  EM ++   P + TYN L  G  +   V  +  L+  M
Sbjct: 721 TTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSM 780

Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
               +  D  T  + I G+C++  +   +++ +       E+D   +N LI   C +G +
Sbjct: 781 ILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEI 840

Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
             A ++   +    +  D  T + ++  L  + +  ++  +  +M +  ++P    ++ L
Sbjct: 841 NWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGL 900

Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
           ++G  R+        +  +M   K+ P     S +V  L
Sbjct: 901 LNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 939



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 162/361 (44%), Gaps = 2/361 (0%)

Query: 14   PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
            PN V Y   +DG+ K G          QM    +  DVVT N++I G        +   L
Sbjct: 682  PNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDL 741

Query: 74   FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             FEM +Q   P++ T+N+++    K   +  +  L   M+   + P+  T  +++ G C 
Sbjct: 742  LFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICE 801

Query: 134  TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            +  +    ++  +    G + D  ++N+LI+  C N E+  A  +   M S GI     T
Sbjct: 802  SNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNT 861

Query: 194  YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
             + +   L   H+ + +  +  EM +  ++ ++  Y   ++GLC+ G I  A  +   + 
Sbjct: 862  CDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMI 921

Query: 254  ILK-CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
              K C  ++ A + ++  L K G+ + A  L RS+ +  LV  + ++  ++H  C +G +
Sbjct: 922  AHKICPPNV-AESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNV 980

Query: 313  DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
             +A +L + M    +  +++ +  LI G       +   EL  +MK    + + +    +
Sbjct: 981  TEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKAL 1040

Query: 373  V 373
            V
Sbjct: 1041 V 1041



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 109/223 (48%)

Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
           C  +   ++ILI  Y +   ++++L ++R M   G  P+V T N +   + +  +     
Sbjct: 119 CNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVW 178

Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
              +EM +  +  D +T+N  I+ LC  G   ++  L + +        I  YN ++   
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238

Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
           CK GR + A+EL   +  + + ADV TYN++IH LC   +  K + L  DM +  + PN 
Sbjct: 239 CKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNE 298

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
           + + TL++GF    K     +LL++M    + P+    + ++D
Sbjct: 299 VTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALID 341



 Score = 37.7 bits (86), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 30/49 (61%)

Query: 13   KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGL 61
            K + V+YN +I GLC +G +  A  LF +MK +    +V TY +L+ G+
Sbjct: 996  KLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGI 1044


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 204/364 (56%)

Query: 11  VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
           VC P    ++ +     + G +++A   F +M    + P   + N+ ++ L      + +
Sbjct: 177 VCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLS 236

Query: 71  KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
            + F +M+  G+  SV T+N+++  +CK G M  A  L   M Q  + P+  TY++L+DG
Sbjct: 237 NKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDG 296

Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
           +   G ++ +  LF  M+ +GC+ D ++YN LIN +CK +++ +A     EM + G+KP 
Sbjct: 297 YGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPN 356

Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
           VVTY+TL   L + H ++ A+K   +M+R  ++ +  TY + ID  CK GY+ +A++L  
Sbjct: 357 VVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLAD 416

Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
            +  ++   ++  Y  L+DGLCK GR+  A +LFR++ +  +  ++ TY  ++HG   + 
Sbjct: 417 EMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNK 476

Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
           +++ A +L  +++E  + P+++++ T+I G    NK  +   ++ +MK   +  ++ I +
Sbjct: 477 RVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYT 536

Query: 371 MVVD 374
           + +D
Sbjct: 537 IRMD 540



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 190/351 (54%), Gaps = 1/351 (0%)

Query: 10  VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
           V C+P+ +TYN +I+  CK   + KA     +MK   + P+VVTY++LI  LC  +   +
Sbjct: 316 VGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQ 375

Query: 70  AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
           A +   +M   G+ P+  T+  ++D  CK G + +A +L D M+Q  V  N  TY+TL+D
Sbjct: 376 AIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLD 435

Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
           G C  G++  AE+LF +M   G   +  +Y  L++G+ KNK VE AL L +E+  K IKP
Sbjct: 436 GLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKP 495

Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
            ++ Y T+  GL   +++E    +  EM+   + A++  Y   +D   K G  VEA+ L 
Sbjct: 496 DLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLL 555

Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA-DVVTYNIMIHGLCN 308
           + +  L  E+ I  +  LIDGLCK G +E A++ F  +    L   +V     +I GLC 
Sbjct: 556 QEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCK 615

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
           +  ++ A  LF +M++  + P+ I +  LI G ++     + + +  +M E
Sbjct: 616 NNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSE 666



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 193/403 (47%), Gaps = 36/403 (8%)

Query: 8   IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
           +G     +  TYN +I  +CKEG +  AK+LF QMK   + PD+VTYNSLI G       
Sbjct: 244 VGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLL 303

Query: 68  NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
           +E+  LF EM D G +P V+T+N +++  CK  +M +A   L  M    ++PN  TYSTL
Sbjct: 304 DESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTL 363

Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
           +D  C    + +A +    M  +G   ++ +Y  LI+  CK   + +AL L  EM+   +
Sbjct: 364 IDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQV 423

Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
              VVTY TL  GL +  ++  A  LF  M +  V  +  TY   + G  KN  +  A+E
Sbjct: 424 GFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALE 483

Query: 248 LFRTLGILKCELDIQAYNCLIDGLC----------------------------------- 272
           L + +   K + D+  Y  +I GLC                                   
Sbjct: 484 LLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYF 543

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP-NV 331
           K+G+   AL L + +    +   +VT+ ++I GLC  G +++A D F  M +  + P NV
Sbjct: 544 KTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNV 603

Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
            +   LI G  + N      +L  +M++K ++PD    + ++D
Sbjct: 604 AVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALID 646



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 181/388 (46%), Gaps = 44/388 (11%)

Query: 13  KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
           KPN VTY+T+ID LCKE  + +A    L M+   ++P+  TY SLI   C A   ++A +
Sbjct: 354 KPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALK 413

Query: 73  LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS------- 125
           L  EM+   V  +VVT+  ++D LCK G+M EA  L   M++  V PN  TY+       
Sbjct: 414 LADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHI 473

Query: 126 ----------------------------TLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
                                       T++ G C   K+   E +   M++ G + + V
Sbjct: 474 KNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSV 533

Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
            Y I ++ Y K  +  EAL+L +EM   G++ T+VT+  L  GL +   VE A+  F  M
Sbjct: 534 IYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARM 593

Query: 218 -----QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
                Q ++VA  T+     IDGLCKN YI  A +LF  +       D  AY  LIDG  
Sbjct: 594 ADFNLQPNNVAVCTA----LIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNL 649

Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
           K    + AL +   +    +  D+  Y  ++ GL     + +A     +M    + P+ I
Sbjct: 650 KHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEI 709

Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEK 360
           + + L+  +  +    + IEL  ++ +K
Sbjct: 710 LCIRLLRKYYELGSIDEAIELHDELLKK 737



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 88/188 (46%)

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
           P    ++ LF    E+  +E A + F  M R  V     + N F+  L K G    + + 
Sbjct: 180 PGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKF 239

Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
           FR +        +  YN +I  +CK G +  A  LF  + +  L  D+VTYN +I G   
Sbjct: 240 FRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGK 299

Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
            G +D++  LF +M++    P+VI +  LI+ F +  +  K    LH+MK   + P+   
Sbjct: 300 LGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVT 359

Query: 369 VSMVVDLL 376
            S ++D L
Sbjct: 360 YSTLIDAL 367


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 176/360 (48%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           P T  +N I+  L K        +LF Q +   I PD+ T + LI+  CH      A  +
Sbjct: 59  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  ++ +G  P+ +T N ++  LC  G++  A    D +V +  + +  +Y TL++G C 
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCK 178

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G+      L   +E    K D V Y  +I+  CKNK + +A  LY EM+ KGI P V T
Sbjct: 179 AGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFT 238

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  G   +  ++ A  L  EM+  ++  D  T+N  ID L K G I EA+ LF  + 
Sbjct: 239 YTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMK 298

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
                 +I  Y  LIDGLCK+  LE A+ L + +  + +  +V +Y I++  LC  G+++
Sbjct: 299 HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLE 358

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
            A   F  +       NV  +  +I+G  +      V++L  KM+ K  MP+A     ++
Sbjct: 359 NAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTII 418



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 167/309 (54%)

Query: 14  PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
           PN +T NT+I GLC  G + +A     ++  +    D V+Y +LI+GLC A +     RL
Sbjct: 129 PNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARL 188

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
             ++    V+P +V +  I+  LCKN  + +A  L   M+ + + PN FTY+TL+ GFC+
Sbjct: 189 LRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCI 248

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
            G +  A  L   M+      D  ++NILI+   K  +++EA+SL+ EM  K + P +VT
Sbjct: 249 MGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVT 308

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y +L  GL + H +E A+ L ++M+   +  +  +Y   +D LCK G +  A + F+ L 
Sbjct: 309 YTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLL 368

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +    L+++ YN +I+GLCK+G     ++L   +  +  + + +T+  +I  L    + D
Sbjct: 369 VKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDEND 428

Query: 314 KAHDLFLDM 322
           KA     +M
Sbjct: 429 KAEKFLREM 437



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 148/303 (48%)

Query: 74  FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
           F  M+     P    FN I+  L KN +      L        + P+  T S L++ FC 
Sbjct: 49  FNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCH 108

Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
              I  A  +F ++   G   + ++ N LI G C   E++ AL  + ++V++G +   V+
Sbjct: 109 LTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVS 168

Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
           Y TL  GL +  + +   +L  +++   V  D   Y T I  LCKN  + +A +L+  + 
Sbjct: 169 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMI 228

Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
           +     ++  Y  LI G C  G L+ A  L   +  + +  DV T+NI+I  L  +G++D
Sbjct: 229 VKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKID 288

Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
           +A  LF +M+   + PN++ + +LI G  + +   + I L  KMKE+ + P+    ++++
Sbjct: 289 EAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILL 348

Query: 374 DLL 376
           D L
Sbjct: 349 DAL 351



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 119/228 (52%)

Query: 9   GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
           G   KP+ V Y TII  LCK   +  A  L+ +M  + I+P+V TY +LIHG C   +  
Sbjct: 194 GHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLK 253

Query: 69  EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
           EA  L  EM  + + P V TFN+++D L K GK+DEA  L + M  +++ PN  TY++L+
Sbjct: 254 EAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLI 313

Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
           DG C    + RA  L   M+  G + +  SY IL++  CK   +E A   ++ ++ KG  
Sbjct: 314 DGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYH 373

Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
             V TYN +  GL +       + L  +M+      +  T+ T I  L
Sbjct: 374 LNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICAL 421


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.323    0.139    0.410 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,594,897,342
Number of Sequences: 23463169
Number of extensions: 222684727
Number of successful extensions: 766384
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9330
Number of HSP's successfully gapped in prelim test: 3907
Number of HSP's that attempted gapping in prelim test: 503068
Number of HSP's gapped (non-prelim): 91656
length of query: 376
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 232
effective length of database: 8,980,499,031
effective search space: 2083475775192
effective search space used: 2083475775192
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)